##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM934v1
#!genome-build-accession NCBI_Assembly:GCA_000009345.1
##sequence-region AM286415.1 1 4615899
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=393305
AM286415.1	EMBL	region	1	4615899	.	+	.	ID=id0;Dbxref=taxon:393305;Is_circular=true;gbkey=Src;mol_type=genomic DNA;strain=8081;sub-species=enterocolitica
AM286415.1	EMBL	gene	270	710	.	-	.	ID=gene0;Name=YE0001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0001
AM286415.1	EMBL	CDS	270	710	.	-	0	ID=cds0;Parent=gene0;Dbxref=EnsemblGenomes-Gn:YE0001,EnsemblGenomes-Tr:CAL10146,GOA:A1JHQ8,InterPro:IPR001094,InterPro:IPR008254,InterPro:IPR029039,UniProtKB/TrEMBL:A1JHQ8,NCBI_GP:CAL10146.1;Name=CAL10146.1;gbkey=CDS;product=putative flavoprotein;protein_id=CAL10146.1;transl_table=11
AM286415.1	EMBL	sequence_feature	273	704	.	-	.	ID=id1;Note=Pfam match to entry PF00258 flavodoxin%2C Flavodoxin%2C score 117.3%2C E-value 1.9e-32;gbkey=misc_feature;inference=protein motif:PFAM:PF00258
AM286415.1	EMBL	gene	802	1263	.	-	.	ID=gene1;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=YE0002
AM286415.1	EMBL	CDS	802	1263	.	-	0	ID=cds1;Parent=gene1;Dbxref=EnsemblGenomes-Gn:YE0002,EnsemblGenomes-Tr:CAL10147,GOA:A1JHQ9,InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,InterPro:IPR019885,InterPro:IPR019887,InterPro:IPR019888,UniProtKB/TrEMBL:A1JHQ9,NCBI_GP:CAL10147.1;Name=CAL10147.1;gbkey=CDS;gene=asnC;product=regulatory protein;protein_id=CAL10147.1;transl_table=11
AM286415.1	EMBL	sequence_feature	868	1173	.	-	.	ID=id2;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 61.4%2C E-value 1.2e-15;gbkey=misc_feature;gene=asnC;inference=protein motif:PFAM:PF01037
AM286415.1	EMBL	sequence_feature	1111	1191	.	-	.	ID=id3;Note=PS00519 Bacterial regulatory proteins%2C asnC family signature.;gbkey=misc_feature;gene=asnC;inference=protein motif:Prosite:PS00519
AM286415.1	EMBL	sequence_feature	1129	1194	.	-	.	ID=id4;Note=Predicted helix-turn-helix motif with score 1765.000%2C SD 5.20 at aa 24-45%2C sequence TPYAELAKNFGVSPGTIHVRVE;gbkey=misc_feature;gene=asnC
AM286415.1	EMBL	gene	1449	2441	.	+	.	ID=gene2;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=YE0003
AM286415.1	EMBL	CDS	1449	2441	.	+	0	ID=cds2;Parent=gene2;Dbxref=EnsemblGenomes-Gn:YE0003,EnsemblGenomes-Tr:CAL10148,GOA:A1JHR0,InterPro:IPR004618,InterPro:IPR006195,NCBI_GP:CAL10148.1;Name=CAL10148.1;gbkey=CDS;gene=asnA;product=aspartate-ammonia ligase;protein_id=CAL10148.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1455	2186	.	+	.	ID=id5;Note=Pfam match to entry PF03590 AsnA%2C Aspartate-ammonia ligase%2C score 597.7%2C E-value 4.6e-177;gbkey=misc_feature;gene=asnA;inference=protein motif:PFAM:PF03590
AM286415.1	EMBL	sequence_feature	2055	2078	.	+	.	ID=id6;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=asnA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2595	3266	.	+	.	ID=gene3;Name=YE0004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0004
AM286415.1	EMBL	CDS	2595	3266	.	+	0	ID=cds3;Parent=gene3;Dbxref=EnsemblGenomes-Gn:YE0004,EnsemblGenomes-Tr:CAL10149,InterPro:IPR009781,UniProtKB/TrEMBL:A1JHR1,NCBI_GP:CAL10149.1;Name=CAL10149.1;Note=Similar to Ralstonia solanacearum probable transmembrane protein RSP0410 or RS00867 SWALL:Q8XSQ7 (EMBL:AL646078) (224 aa) fasta scores: E(): 7.3e-36%2C46.54 38d in 217 aa%2C and to Deinococcus radiodurans hypothetical protein DR0351 SWALL:Q9RXG2 (EMBL:AE001895) (227 aa) fasta scores: E(): 3.7e-17%2C 31.67 38d in 221 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646078;product=putative membrane protein;protein_id=CAL10149.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2643	2711	.	+	.	ID=id7;Note=5 probable transmembrane helices predicted for YE0004 by TMHMM2.0 at aa 17-39%2C 43-61%2C 82-104%2C 114-136 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2721	2777	.	+	.	ID=id7;Note=5 probable transmembrane helices predicted for YE0004 by TMHMM2.0 at aa 17-39%2C 43-61%2C 82-104%2C 114-136 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2838	2906	.	+	.	ID=id7;Note=5 probable transmembrane helices predicted for YE0004 by TMHMM2.0 at aa 17-39%2C 43-61%2C 82-104%2C 114-136 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2934	3002	.	+	.	ID=id7;Note=5 probable transmembrane helices predicted for YE0004 by TMHMM2.0 at aa 17-39%2C 43-61%2C 82-104%2C 114-136 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3192	3260	.	+	.	ID=id7;Note=5 probable transmembrane helices predicted for YE0004 by TMHMM2.0 at aa 17-39%2C 43-61%2C 82-104%2C 114-136 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	3276	4742	.	-	.	ID=gene4;Name=YE0005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0005
AM286415.1	EMBL	CDS	3276	4742	.	-	0	ID=cds4;Parent=gene4;Dbxref=EnsemblGenomes-Gn:YE0005,EnsemblGenomes-Tr:CAL10150,InterPro:IPR002035,InterPro:IPR008912,InterPro:IPR023481,NCBI_GP:CAL10150.1;Name=CAL10150.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10150.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4035	4100	.	-	.	ID=id8;Note=Predicted helix-turn-helix motif with score 997.000%2C SD 2.58 at aa 215-236%2C sequence PELQQLAEQLGRSRSAKAQPTP;gbkey=misc_feature
AM286415.1	EMBL	gene	4746	6254	.	-	.	ID=gene5;Name=YE0006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0006
AM286415.1	EMBL	CDS	4746	6254	.	-	0	ID=cds5;Parent=gene5;Dbxref=EnsemblGenomes-Gn:YE0006,EnsemblGenomes-Tr:CAL10151,GOA:A1JHR5,InterPro:IPR003593,InterPro:IPR011704,InterPro:IPR022547,InterPro:IPR023671,InterPro:IPR027417,NCBI_GP:CAL10151.1;Name=CAL10151.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10151.1;transl_table=11
AM286415.1	EMBL	gene	6708	8435	.	+	.	ID=gene6;Name=kup;gbkey=Gene;gene=kup;gene_biotype=protein_coding;gene_synonym=trkD;locus_tag=YE0007
AM286415.1	EMBL	CDS	6708	8435	.	+	0	ID=cds6;Parent=gene6;Dbxref=EnsemblGenomes-Gn:YE0007,EnsemblGenomes-Tr:CAL10152,GOA:A1JHR6,InterPro:IPR003855,InterPro:IPR023051,NCBI_GP:CAL10152.1;Name=CAL10152.1;gbkey=CDS;gene=kup;product=potassium transport protein;protein_id=CAL10152.1;transl_table=11
AM286415.1	EMBL	sequence_feature	6711	8432	.	+	.	ID=id9;Note=Pfam match to entry PF02705 K_trans%2C K+ potassium transporter%2C score 854.9%2C E-value 1.7e-254;gbkey=misc_feature;gene=kup;inference=protein motif:PFAM:PF02705
AM286415.1	EMBL	sequence_feature	6717	6785	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	6870	6938	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	6966	7034	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	7068	7136	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	7194	7262	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	7299	7367	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	7425	7493	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	7566	7634	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	7662	7730	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	7749	7802	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	7830	7886	.	+	.	ID=id10;Note=11 probable transmembrane helices predicted for YE0007 by TMHMM2.0 at aa 4-26%2C 55-77%2C 87-109%2C 121-143%2C163-185%2C 198-220%2C 240-262%2C 287-309%2C 319-341%2C 348-365 and 375-393;gbkey=misc_feature;gene=kup;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	8606	9025	.	+	.	ID=gene7;Name=YE0008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0008
AM286415.1	EMBL	CDS	8606	9025	.	+	0	ID=cds7;Parent=gene7;Dbxref=EnsemblGenomes-Gn:YE0008,EnsemblGenomes-Tr:CAL10153,GOA:A1JHR8,InterPro:IPR007721,InterPro:IPR023064,InterPro:IPR023750,NCBI_GP:CAL10153.1;Name=CAL10153.1;gbkey=CDS;product=ribose permease;protein_id=CAL10153.1;transl_table=11
AM286415.1	EMBL	gene	9033	10535	.	+	.	ID=gene8;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=YE0009
AM286415.1	EMBL	CDS	9033	10535	.	+	0	ID=cds8;Parent=gene8;Dbxref=EnsemblGenomes-Gn:YE0009,EnsemblGenomes-Tr:CAL10154,GOA:A1JHS1,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR015861,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JHS1,NCBI_GP:CAL10154.1;Name=CAL10154.1;Note=Similar to Escherichia coli ribose transport ATP-binding protein RbsA SWALL:RBSA_ECOLI (SWALL:P04983) (501 aa) fasta scores: E(): 2.7e-148%2C 85.83 38d in 494 aa%2Cand to Salmonella typhi high affinity ribose transport protein STY896 SWALL:Q8Z2R4 (EMBL:AL627280) (501 aa) fasta scores: E(): 1.1e-147%2C 85.62 38d in 494 aa;gbkey=CDS;gene=rbsA;inference=similar to sequence:UniProtKB:P04983;product=putative ribose transport ATP-binding protein;protein_id=CAL10154.1;transl_table=11
AM286415.1	EMBL	sequence_feature	9120	9683	.	+	.	ID=id11;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 173.1%2C E-value 3e-49;gbkey=misc_feature;gene=rbsA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	9141	9164	.	+	.	ID=id12;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=rbsA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	9864	10445	.	+	.	ID=id13;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 134.4%2C E-value 1.3e-37;gbkey=misc_feature;gene=rbsA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	10218	10262	.	+	.	ID=id14;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=rbsA;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	10623	11588	.	+	.	ID=gene9;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=YE0010
AM286415.1	EMBL	CDS	10623	11588	.	+	0	ID=cds9;Parent=gene9;Dbxref=EnsemblGenomes-Gn:YE0010,EnsemblGenomes-Tr:CAL10155,GOA:A1JHS2,InterPro:IPR001851,UniProtKB/TrEMBL:A1JHS2,NCBI_GP:CAL10155.1;Name=CAL10155.1;gbkey=CDS;gene=rbsC;product=putative sugar transport system%2C permease protein;protein_id=CAL10155.1;transl_table=11
AM286415.1	EMBL	sequence_feature	10686	10754	.	+	.	ID=id15;Note=7 probable transmembrane helices predicted for YE0010 by TMHMM2.0 at aa 22-44%2C 65-87%2C 97-119%2C 126-148%2C168-190%2C 221-243 and 275-297;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	10815	10883	.	+	.	ID=id15;Note=7 probable transmembrane helices predicted for YE0010 by TMHMM2.0 at aa 22-44%2C 65-87%2C 97-119%2C 126-148%2C168-190%2C 221-243 and 275-297;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	10911	10979	.	+	.	ID=id15;Note=7 probable transmembrane helices predicted for YE0010 by TMHMM2.0 at aa 22-44%2C 65-87%2C 97-119%2C 126-148%2C168-190%2C 221-243 and 275-297;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	10998	11066	.	+	.	ID=id15;Note=7 probable transmembrane helices predicted for YE0010 by TMHMM2.0 at aa 22-44%2C 65-87%2C 97-119%2C 126-148%2C168-190%2C 221-243 and 275-297;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	11124	11192	.	+	.	ID=id15;Note=7 probable transmembrane helices predicted for YE0010 by TMHMM2.0 at aa 22-44%2C 65-87%2C 97-119%2C 126-148%2C168-190%2C 221-243 and 275-297;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	11283	11351	.	+	.	ID=id15;Note=7 probable transmembrane helices predicted for YE0010 by TMHMM2.0 at aa 22-44%2C 65-87%2C 97-119%2C 126-148%2C168-190%2C 221-243 and 275-297;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	11445	11513	.	+	.	ID=id15;Note=7 probable transmembrane helices predicted for YE0010 by TMHMM2.0 at aa 22-44%2C 65-87%2C 97-119%2C 126-148%2C168-190%2C 221-243 and 275-297;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	10746	11582	.	+	.	ID=id16;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score 3.4%2C E-value 7.7e-07;gbkey=misc_feature;gene=rbsC;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	gene	11760	12647	.	+	.	ID=gene10;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;gene_synonym=prlB,rbsP;locus_tag=YE0011
AM286415.1	EMBL	CDS	11760	12647	.	+	0	ID=cds10;Parent=gene10;Dbxref=EnsemblGenomes-Gn:YE0011,EnsemblGenomes-Tr:CAL10156,InterPro:IPR025997,InterPro:IPR028082,UniProtKB/TrEMBL:A1JHS3,NCBI_GP:CAL10156.1;Name=CAL10156.1;Note=Similar to Escherichia coli D-ribose-binding periplasmic protein precursor RbsB or RbsP or PrlB SWALL:RBSB_ECOLI (SWALL:P02925) (296 aa) fasta scores: E(): 1.7e-84%2C 84.74 38d in 295 aa%2C and to Salmonella typhimurium%2C and Salmonella typhi D-ribose-binding periplasmic protein precursor RbsB or RbsP or STM3884 or STY3894 SWALL:RBSB_SALTY (SWALL:P02926) (296 aa) fasta scores: E(): 5.6e-84%2C 84.06 38d in 295 aa;gbkey=CDS;gene=rbsB;inference=similar to sequence:UniProtKB:P02926;product=putative D-ribose-binding periplasmic protein precursor;protein_id=CAL10156.1;transl_table=11
AM286415.1	EMBL	sequence_feature	11835	12641	.	+	.	ID=id17;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 63.4%2C E-value 3.3e-16;gbkey=misc_feature;gene=rbsB;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	sequence_feature	12432	12455	.	+	.	ID=id18;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=rbsB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	12811	13737	.	+	.	ID=gene11;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=YE0012
AM286415.1	EMBL	CDS	12811	13737	.	+	0	ID=cds11;Parent=gene11;Dbxref=EnsemblGenomes-Gn:YE0012,EnsemblGenomes-Tr:CAL10157,GOA:A1JHS4,InterPro:IPR002139,InterPro:IPR002173,InterPro:IPR011611,InterPro:IPR011877,InterPro:IPR029056,UniProtKB/TrEMBL:A1JHS4,NCBI_GP:CAL10157.1;Name=CAL10157.1;gbkey=CDS;gene=rbsK;product=ribokinase;protein_id=CAL10157.1;transl_table=11
AM286415.1	EMBL	sequence_feature	12817	13701	.	+	.	ID=id19;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 298.8%2C E-value 4.4e-87;gbkey=misc_feature;gene=rbsK;inference=protein motif:PFAM:PF00294
AM286415.1	EMBL	sequence_feature	12928	13002	.	+	.	ID=id20;Note=PS00583 pfkB family of carbohydrate kinases signature 1.;gbkey=misc_feature;gene=rbsK;inference=protein motif:Prosite:PS00583
AM286415.1	EMBL	sequence_feature	13552	13593	.	+	.	ID=id21;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;gbkey=misc_feature;gene=rbsK;inference=protein motif:Prosite:PS00584
AM286415.1	EMBL	gene	13740	14741	.	+	.	ID=gene12;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=YE0012A
AM286415.1	EMBL	CDS	13740	14741	.	+	0	ID=cds12;Parent=gene12;Dbxref=EnsemblGenomes-Gn:YE0012A,EnsemblGenomes-Tr:CAL10158,GOA:A1JHS5,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JHS5,NCBI_GP:CAL10158.1;Name=CAL10158.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 ribose operon repressor RbsR or b3753 or z5254 or ecs4695 SWALL:RBSR_ECOLI (SWALL:P25551) (329 aa) fasta scores: E(): 7.1e-94%2C 73.17 38d in 328 aa and to Salmonella typhimurium transcriptional repressor for rbs operon RbsR or stm3886 SWALL:Q8ZKV7 (EMBL:AE008881) (332 aa) fasta scores: E(): 5.3e-95%2C 74.09 38d in 332 aa;gbkey=CDS;gene=rbsR;inference=similar to sequence:UniProtKB:P25551;product=ribose operon repressor;protein_id=CAL10158.1;transl_table=11
AM286415.1	EMBL	gene	14738	16162	.	-	.	ID=gene13;Name=YE0013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0013
AM286415.1	EMBL	CDS	14738	16162	.	-	0	ID=cds13;Parent=gene13;Dbxref=EnsemblGenomes-Gn:YE0013,EnsemblGenomes-Tr:CAL10159,GOA:A1JHS6,InterPro:IPR001411,InterPro:IPR004638,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JHS6,NCBI_GP:CAL10159.1;Name=CAL10159.1;gbkey=CDS;product=putative membrane transport protein;protein_id=CAL10159.1;transl_table=11
AM286415.1	EMBL	sequence_feature	16058	16126	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	15956	16015	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	15869	15937	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	15791	15859	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	15689	15757	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	15620	15679	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	15527	15583	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	15431	15499	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	15344	15412	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	15233	15301	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	15128	15196	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	15032	15100	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	14927	14995	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	14816	14884	.	-	.	ID=id22;Note=14 probable transmembrane helices predicted for YE0013 by TMHMM2.0 at aa 13-35%2C 50-69%2C 76-98%2C 102-124%2C136-158%2C 162-181%2C 194-212%2C 222-244%2C 251-273%2C 288-310%2C323-345%2C 355-377%2C 390-412 and 427-449;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	sequence_feature	15830	16132	.	-	.	ID=id23;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 20.7%2C E-value 2.1e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	16237	16926	.	-	.	ID=gene14;Name=YE0014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0014
AM286415.1	EMBL	CDS	16237	16926	.	-	0	ID=cds14;Parent=gene14;Dbxref=EnsemblGenomes-Gn:YE0014,EnsemblGenomes-Tr:CAL10160,GOA:A1JHS7,InterPro:IPR000524,InterPro:IPR008920,InterPro:IPR011711,InterPro:IPR011991,UniProtKB/TrEMBL:A1JHS7,NCBI_GP:CAL10160.1;Name=CAL10160.1;gbkey=CDS;product=putative GntR-famly transcriptional regulator;protein_id=CAL10160.1;transl_table=11
AM286415.1	EMBL	sequence_feature	16696	16875	.	-	.	ID=id24;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 79.0%2C E-value 6.6e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	sequence_feature	16744	16818	.	-	.	ID=id25;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00043
AM286415.1	EMBL	sequence_feature	16750	16815	.	-	.	ID=id26;Note=Predicted helix-turn-helix motif with score 1101.000%2C SD 2.94 at aa 38-59%2C sequence PGEIELGEQFGVSRTAVREAVK;gbkey=misc_feature
AM286415.1	EMBL	gene	17506	18994	.	+	.	ID=gene15;Name=16S rRNA;gbkey=Gene;gene=16S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	17506	18994	.	+	.	ID=rna0;Parent=gene15;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	exon	17506	18994	.	+	.	ID=id27;Parent=rna0;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	gene	19220	19295	.	+	.	ID=gene16;Name=tRNA-Glu (TTC);gbkey=Gene;gene=tRNA-Glu (TTC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	19220	19295	.	+	.	ID=rna1;Parent=gene16;gbkey=tRNA;gene=tRNA-Glu (TTC);product=tRNA-Glu
AM286415.1	EMBL	exon	19220	19295	.	+	.	ID=id28;Parent=rna1;gbkey=tRNA;gene=tRNA-Glu (TTC);product=tRNA-Glu
AM286415.1	EMBL	gene	19674	22667	.	+	.	ID=gene17;Name=23S rRNA;gbkey=Gene;gene=23S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	19674	22667	.	+	.	ID=rna2;Parent=gene17;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	exon	19674	22667	.	+	.	ID=id29;Parent=rna2;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	gene	22667	22908	.	+	.	ID=gene18;Name=5S rRNA;gbkey=Gene;gene=5S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	22667	22908	.	+	.	ID=rna3;Parent=gene18;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	exon	22667	22908	.	+	.	ID=id30;Parent=rna3;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	gene	23194	23721	.	-	.	ID=gene19;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=YE0016
AM286415.1	EMBL	CDS	23194	23721	.	-	0	ID=cds15;Parent=gene19;Dbxref=EnsemblGenomes-Gn:YE0016,EnsemblGenomes-Tr:CAL10161,GOA:A1JHS8,InterPro:IPR004435,InterPro:IPR027417,InterPro:IPR029007,UniProtKB/TrEMBL:A1JHS8,NCBI_GP:CAL10161.1;Name=CAL10161.1;gbkey=CDS;gene=mobB;product=probable molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=CAL10161.1;transl_table=11
AM286415.1	EMBL	sequence_feature	23299	23703	.	-	.	ID=id31;Note=Pfam match to entry PF03205 MobB%2C Molybdopterin guanine dinucleotide synthesis protein B%2C score 184.3%2CE-value 1.3e-52;gbkey=misc_feature;gene=mobB;inference=protein motif:PFAM:PF03205
AM286415.1	EMBL	sequence_feature	23662	23685	.	-	.	ID=id32;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=mobB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	23718	24317	.	-	.	ID=gene20;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;gene_synonym=chlB,mob,nar;locus_tag=YE0017
AM286415.1	EMBL	CDS	23718	24317	.	-	0	ID=cds16;Parent=gene20;Dbxref=EnsemblGenomes-Gn:YE0017,EnsemblGenomes-Tr:CAL10162,GOA:A1JHS9,InterPro:IPR013482,InterPro:IPR025877,InterPro:IPR029044,UniProtKB/TrEMBL:A1JHS9,NCBI_GP:CAL10162.1;Name=CAL10162.1;gbkey=CDS;gene=mobA;product=molybdopterin-guanine dinucleotide biosynthesis protein A;protein_id=CAL10162.1;transl_table=11
AM286415.1	EMBL	gene	24462	24731	.	+	.	ID=gene21;Name=YE0018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0018
AM286415.1	EMBL	CDS	24462	24731	.	+	0	ID=cds17;Parent=gene21;Dbxref=EnsemblGenomes-Gn:YE0018,EnsemblGenomes-Tr:CAL10163,InterPro:IPR009383,UniProtKB/TrEMBL:A1JHT0,NCBI_GP:CAL10163.1;Name=CAL10163.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10163.1;transl_table=11
AM286415.1	EMBL	gene	24823	25809	.	+	.	ID=gene22;Name=YE0019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0019
AM286415.1	EMBL	CDS	24823	25809	.	+	0	ID=cds18;Parent=gene22;Dbxref=EnsemblGenomes-Gn:YE0019,EnsemblGenomes-Tr:CAL10164,GOA:A1JHT1,InterPro:IPR002575,InterPro:IPR011009,UniProtKB/TrEMBL:A1JHT1,NCBI_GP:CAL10164.1;Name=CAL10164.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10164.1;transl_table=11
AM286415.1	EMBL	gene	25856	26479	.	+	.	ID=gene23;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=YE0020
AM286415.1	EMBL	CDS	25856	26479	.	+	0	ID=cds19;Parent=gene23;Dbxref=EnsemblGenomes-Gn:YE0020,EnsemblGenomes-Tr:CAL10165,GOA:A1JHT2,InterPro:IPR001853,InterPro:IPR012336,InterPro:IPR017937,InterPro:IPR023205,UniProtKB/TrEMBL:A1JHT2,NCBI_GP:CAL10165.1;Name=CAL10165.1;gbkey=CDS;gene=dsbA;product=secreted thiol:disulfide interchange protein DsbA;protein_id=CAL10165.1;transl_table=11
AM286415.1	EMBL	sequence_feature	25856	26476	.	+	.	ID=id33;Note=Pfam match to entry PF01323 DSBA%2C DSBA oxidoreductase%2C score 486.2%2C E-value 1.7e-143;gbkey=misc_feature;gene=dsbA;inference=protein motif:PFAM:PF01323
AM286415.1	EMBL	sequence_feature	25976	26032	.	+	.	ID=id34;Note=PS00194 Thioredoxin family active site.;gbkey=misc_feature;gene=dsbA;inference=protein motif:Prosite:PS00194
AM286415.1	EMBL	gene	27070	29868	.	+	.	ID=gene24;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;gene_synonym=resA;locus_tag=YE0021
AM286415.1	EMBL	CDS	27070	29868	.	+	0	ID=cds20;Parent=gene24;Dbxref=EnsemblGenomes-Gn:YE0021,EnsemblGenomes-Tr:CAL10166,GOA:A1JHT3,InterPro:IPR001098,InterPro:IPR002298,InterPro:IPR002421,InterPro:IPR002562,InterPro:IPR003583,InterPro:IPR008918,InterPro:IPR012337,InterPro:IPR018320,InterPro:IPR019760,InterPro:IPR020045,InterPro:IPR020046,InterPro:IPR029060,UniProtKB/TrEMBL:A1JHT3,NCBI_GP:CAL10166.1;Name=CAL10166.1;gbkey=CDS;gene=polA;product=DNA polymerase I;protein_id=CAL10166.1;transl_table=11
AM286415.1	EMBL	sequence_feature	27088	27576	.	+	.	ID=id35;Note=Pfam match to entry PF02739 5_3_exonuc_N%2C 5'-3' exonuclease%2C N-terminal resolvase-like domain%2C score 316.3%2C E-value 2.4e-92;gbkey=misc_feature;gene=polA;inference=protein motif:PFAM:PF02739
AM286415.1	EMBL	sequence_feature	27580	27900	.	+	.	ID=id36;Note=Pfam match to entry PF01367 5_3_exonuclease%2C 5'-3' exonuclease%2C C-terminal SAM fold%2C score 194.5%2C E-value 1.1e-55;gbkey=misc_feature;gene=polA;inference=protein motif:PFAM:PF01367
AM286415.1	EMBL	sequence_feature	28048	28629	.	+	.	ID=id37;Note=Pfam match to entry PF01612 3_5_exonuclease%2C 3'-5' exonuclease%2C score 229.0%2C E-value 4.4e-66;gbkey=misc_feature;gene=polA;inference=protein motif:PFAM:PF01612
AM286415.1	EMBL	sequence_feature	28717	29862	.	+	.	ID=id38;Note=Pfam match to entry PF00476 DNA_pol_A%2C DNA polymerase family A%2C score 698.2%2C E-value 2.6e-207;gbkey=misc_feature;gene=polA;inference=protein motif:PFAM:PF00476
AM286415.1	EMBL	sequence_feature	29338	29397	.	+	.	ID=id39;Note=PS00447 DNA polymerase family A signature.;gbkey=misc_feature;gene=polA;inference=protein motif:Prosite:PS00447
AM286415.1	EMBL	transcript	30017	30134	.	+	.	ID=rna4;Note=Spot 42 RNA (RF00021) as predicted by Rfam%2C score 91.54%2C positions 1 to 118;gbkey=misc_RNA
AM286415.1	EMBL	exon	30017	30134	.	+	.	ID=id40;Parent=rna4;Note=Spot 42 RNA (RF00021) as predicted by Rfam%2C score 91.54%2C positions 1 to 118;gbkey=misc_RNA
AM286415.1	EMBL	gene	30302	30955	.	-	.	ID=gene25;Name=YE0022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0022
AM286415.1	EMBL	CDS	30302	30955	.	-	0	ID=cds21;Parent=gene25;Dbxref=EnsemblGenomes-Gn:YE0022,EnsemblGenomes-Tr:CAL10167,GOA:A1JHT4,InterPro:IPR006073,InterPro:IPR019987,InterPro:IPR027417,NCBI_GP:CAL10167.1;Name=CAL10167.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10167.1;transl_table=11
AM286415.1	EMBL	sequence_feature	30830	30853	.	-	.	ID=id41;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	transcript	31382	31582	.	+	.	ID=rna5;Note=CsrC family RNA (RF00084) as predicted by Rfam%2Cscore 35.38%2C positions 1 to 254;gbkey=misc_RNA
AM286415.1	EMBL	exon	31382	31582	.	+	.	ID=id42;Parent=rna5;Note=CsrC family RNA (RF00084) as predicted by Rfam%2Cscore 35.38%2C positions 1 to 254;gbkey=misc_RNA
AM286415.1	EMBL	gene	31718	32284	.	+	.	ID=gene26;Name=YE0023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0023
AM286415.1	EMBL	CDS	31718	32284	.	+	0	ID=cds22;Parent=gene26;Dbxref=EnsemblGenomes-Gn:YE0023,EnsemblGenomes-Tr:CAL10168,GOA:A1JHT5,InterPro:IPR007336,NCBI_GP:CAL10168.1;Name=CAL10168.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10168.1;transl_table=11
AM286415.1	EMBL	gene	32467	33840	.	+	.	ID=gene27;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=YE0024
AM286415.1	EMBL	CDS	32467	33840	.	+	0	ID=cds23;Parent=gene27;Dbxref=EnsemblGenomes-Gn:YE0024,EnsemblGenomes-Tr:CAL10169,GOA:A1JHT6,InterPro:IPR004558,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR010723,InterPro:IPR023404,UniProtKB/TrEMBL:A1JHT6,NCBI_GP:CAL10169.1;Name=CAL10169.1;gbkey=CDS;gene=hemN;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=CAL10169.1;transl_table=11
AM286415.1	EMBL	sequence_feature	32761	33522	.	+	.	ID=id43;Note=Pfam match to entry PF02473 Coprogen_an_ox%2COxygen-independent Coproporphyrinogen III oxidase%2C score 555.2%2C E-value 2.8e-164;gbkey=misc_feature;gene=hemN;inference=protein motif:PFAM:PF02473
AM286415.1	EMBL	gene	33989	35401	.	-	.	ID=gene28;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;gene_synonym=glnG,glnT;locus_tag=YE0025
AM286415.1	EMBL	CDS	33989	35401	.	-	0	ID=cds24;Parent=gene28;Dbxref=EnsemblGenomes-Gn:YE0025,EnsemblGenomes-Tr:CAL10170,GOA:A1JHT7,InterPro:IPR001789,InterPro:IPR002078,InterPro:IPR002197,InterPro:IPR003593,InterPro:IPR009057,InterPro:IPR010114,InterPro:IPR011006,InterPro:IPR025662,InterPro:IPR025943,InterPro:IPR025944,InterPro:IPR027417,UniProtKB/TrEMBL:A1JHT7,NCBI_GP:CAL10170.1;Name=CAL10170.1;gbkey=CDS;gene=ntrC;product=nitrogen regulation protein;protein_id=CAL10170.1;transl_table=11
AM286415.1	EMBL	sequence_feature	34001	34123	.	-	.	ID=id44;Note=Pfam match to entry PF02954 HTH_8%2C Bacterial regulatory protein%2C Fis family%2C score 64.1%2C E-value 2e-16;gbkey=misc_feature;gene=ntrC;inference=protein motif:PFAM:PF02954
AM286415.1	EMBL	sequence_feature	34007	34072	.	-	.	ID=id45;Note=Predicted helix-turn-helix motif with score 1763.000%2C SD 5.19 at aa 444-465%2C sequence GHKQEAARLLGWGRNTLTRKLK;gbkey=misc_feature;gene=ntrC
AM286415.1	EMBL	sequence_feature	34313	34342	.	-	.	ID=id46;Note=PS00688 Sigma-54 interaction domain C-terminal part signature.;gbkey=misc_feature;gene=ntrC;inference=protein motif:Prosite:PS00688
AM286415.1	EMBL	sequence_feature	34316	34981	.	-	.	ID=id47;Note=Pfam match to entry PF00158 Sigma54_activat%2CSigma-54 interaction domain%2C score 496.8%2C E-value 1.1e-146;gbkey=misc_feature;gene=ntrC;inference=protein motif:PFAM:PF00158
AM286415.1	EMBL	sequence_feature	34676	34723	.	-	.	ID=id48;Note=PS00676 Sigma-54 interaction domain ATP-binding region B signature.;gbkey=misc_feature;gene=ntrC;inference=protein motif:Prosite:PS00676
AM286415.1	EMBL	sequence_feature	34868	34909	.	-	.	ID=id49;Note=PS00675 Sigma-54 interaction domain ATP-binding region A signature.;gbkey=misc_feature;gene=ntrC;inference=protein motif:Prosite:PS00675
AM286415.1	EMBL	sequence_feature	35033	35392	.	-	.	ID=id50;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 148.5%2C E-value 7.8e-42;gbkey=misc_feature;gene=ntrC;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	35409	36458	.	-	.	ID=gene29;Name=ntrB;gbkey=Gene;gene=ntrB;gene_biotype=protein_coding;gene_synonym=glnl,glnR;locus_tag=YE0026
AM286415.1	EMBL	CDS	35409	36458	.	-	0	ID=cds25;Parent=gene29;Dbxref=EnsemblGenomes-Gn:YE0026,EnsemblGenomes-Tr:CAL10171,GOA:A1JHT8,InterPro:IPR000014,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR013767,UniProtKB/TrEMBL:A1JHT8,NCBI_GP:CAL10171.1;Name=CAL10171.1;gbkey=CDS;gene=ntrB;product=Two component regulatory protein involved in nitrogen assimilation;protein_id=CAL10171.1;transl_table=11
AM286415.1	EMBL	sequence_feature	35415	35762	.	-	.	ID=id51;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 104.0%2C E-value 1.9e-28;gbkey=misc_feature;gene=ntrB;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	35877	36074	.	-	.	ID=id52;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 64.0%2C E-value 2.1e-16;gbkey=misc_feature;gene=ntrB;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	gene	36607	38016	.	-	.	ID=gene30;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=YE0027
AM286415.1	EMBL	CDS	36607	38016	.	-	0	ID=cds26;Parent=gene30;Dbxref=EnsemblGenomes-Gn:YE0027,EnsemblGenomes-Tr:CAL10172,GOA:A1JHT9,InterPro:IPR001637,InterPro:IPR004809,InterPro:IPR008146,InterPro:IPR008147,InterPro:IPR014746,InterPro:IPR027302,InterPro:IPR027303,UniProtKB/TrEMBL:A1JHT9,NCBI_GP:CAL10172.1;Name=CAL10172.1;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=CAL10172.1;transl_table=11
AM286415.1	EMBL	sequence_feature	36823	36861	.	-	.	ID=id53;Note=PS00182 Glutamine synthetase class-I adenylation site.;gbkey=misc_feature;gene=glnA;inference=protein motif:Prosite:PS00182
AM286415.1	EMBL	sequence_feature	36868	37713	.	-	.	ID=id54;Note=Pfam match to entry PF00120 gln-synt%2C Glutamine synthetase%2C catalytic domain%2C score 563.6%2C E-value 8.6e-167;gbkey=misc_feature;gene=glnA;inference=protein motif:PFAM:PF00120
AM286415.1	EMBL	sequence_feature	37195	37242	.	-	.	ID=id55;Note=PS00181 Glutamine synthetase putative ATP-binding region signature.;gbkey=misc_feature;gene=glnA;inference=protein motif:Prosite:PS00181
AM286415.1	EMBL	sequence_feature	37729	37977	.	-	.	ID=id56;Note=Pfam match to entry PF03951 gln-synt_N%2C Glutamine synthetase%2C beta-Grasp domain%2C score 169.3%2C E-value 4.1e-48;gbkey=misc_feature;gene=glnA;inference=protein motif:PFAM:PF03951
AM286415.1	EMBL	sequence_feature	37813	37869	.	-	.	ID=id57;Note=PS00180 Glutamine synthetase signature 1.;gbkey=misc_feature;gene=glnA;inference=protein motif:Prosite:PS00180
AM286415.1	EMBL	gene	38201	38311	.	-	.	ID=gene31;Name=YE0028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0028
AM286415.1	EMBL	CDS	38201	38311	.	-	0	ID=cds27;Parent=gene31;Dbxref=EnsemblGenomes-Gn:YE0028,EnsemblGenomes-Tr:CAL10173,UniProtKB/TrEMBL:A1JHU0,NCBI_GP:CAL10173.1;Name=CAL10173.1;Note=Poor database matches. Similar to the N-terminal region of Yersinia pestis possible membrane protein YPO0025 SWALL:Q8ZJR4 (EMBL:AJ414141) (52 aa) fasta scores: E(): 1.8e-12%2C 80.55 38d in 36 aa. Doubtful CDS;gbkey=CDS;inference=similar to sequence:INSDC:AJ414141;product=hypothetical protein;protein_id=CAL10173.1;transl_table=11
AM286415.1	EMBL	gene	38529	40352	.	+	.	ID=gene32;Name=bipA;gbkey=Gene;gene=bipA;gene_biotype=protein_coding;gene_synonym=typA;locus_tag=YE0029
AM286415.1	EMBL	CDS	38529	40352	.	+	0	ID=cds28;Parent=gene32;Dbxref=EnsemblGenomes-Gn:YE0029,EnsemblGenomes-Tr:CAL10174,GOA:A1JHU1,InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR006298,InterPro:IPR009000,InterPro:IPR009022,InterPro:IPR027417,UniProtKB/TrEMBL:A1JHU1,NCBI_GP:CAL10174.1;Name=CAL10174.1;gbkey=CDS;gene=bipA;product=putative GTPase;protein_id=CAL10174.1;transl_table=11
AM286415.1	EMBL	sequence_feature	38535	39122	.	+	.	ID=id58;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu GTP binding domain%2C score 258.2%2C E-value 7.1e-75;gbkey=misc_feature;gene=bipA;inference=protein motif:PFAM:PF00009
AM286415.1	EMBL	sequence_feature	38562	38585	.	+	.	ID=id59;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=bipA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	38658	38705	.	+	.	ID=id60;Note=PS00301 GTP-binding elongation factors signature.;gbkey=misc_feature;gene=bipA;inference=protein motif:Prosite:PS00301
AM286415.1	EMBL	sequence_feature	39147	39395	.	+	.	ID=id61;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 71.9%2C E-value 8.8e-19;gbkey=misc_feature;gene=bipA;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	sequence_feature	39711	39977	.	+	.	ID=id62;Note=Pfam match to entry PF00679 EFG_C%2C Elongation factor G C-terminus%2C score 112.3%2C E-value 6e-31;gbkey=misc_feature;gene=bipA;inference=protein motif:PFAM:PF00679
AM286415.1	EMBL	gene	40648	41235	.	+	.	ID=gene33;Name=YE0030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0030
AM286415.1	EMBL	CDS	40648	41235	.	+	0	ID=cds29;Parent=gene33;Dbxref=EnsemblGenomes-Gn:YE0030,EnsemblGenomes-Tr:CAL10175,GOA:A1JHU2,InterPro:IPR006439,InterPro:IPR023198,InterPro:IPR023214,UniProtKB/TrEMBL:A1JHU2,NCBI_GP:CAL10175.1;Name=CAL10175.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10175.1;transl_table=11
AM286415.1	EMBL	sequence_feature	40648	41208	.	+	.	ID=id63;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 61.6%2C E-value 1.1e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	41328	42218	.	+	.	ID=gene34;Name=rbn;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=YE0031
AM286415.1	EMBL	CDS	41328	42218	.	+	0	ID=cds30;Parent=gene34;Dbxref=EnsemblGenomes-Gn:YE0031,EnsemblGenomes-Tr:CAL10176,GOA:A1JHU3,InterPro:IPR017039,InterPro:IPR023679,NCBI_GP:CAL10176.1;Name=CAL10176.1;gbkey=CDS;gene=rbn;product=ribonuclease BN;protein_id=CAL10176.1;transl_table=11
AM286415.1	EMBL	sequence_feature	41409	42161	.	+	.	ID=id64;Note=Pfam match to entry PF03631 Ribonuclease_BN%2CRibonuclease BN-like family%2C score 289.2%2C E-value 3.5e-84;gbkey=misc_feature;gene=rbn;inference=protein motif:PFAM:PF03631
AM286415.1	EMBL	sequence_feature	41442	41510	.	+	.	ID=id65;Note=6 probable transmembrane helices predicted for YE0031 by TMHMM2.0 at aa 39-61%2C 101-120%2C 141-163%2C 183-202%2C214-236 and 246-268;gbkey=misc_feature;gene=rbn;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	41628	41687	.	+	.	ID=id65;Note=6 probable transmembrane helices predicted for YE0031 by TMHMM2.0 at aa 39-61%2C 101-120%2C 141-163%2C 183-202%2C214-236 and 246-268;gbkey=misc_feature;gene=rbn;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	41748	41816	.	+	.	ID=id65;Note=6 probable transmembrane helices predicted for YE0031 by TMHMM2.0 at aa 39-61%2C 101-120%2C 141-163%2C 183-202%2C214-236 and 246-268;gbkey=misc_feature;gene=rbn;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	41874	41933	.	+	.	ID=id65;Note=6 probable transmembrane helices predicted for YE0031 by TMHMM2.0 at aa 39-61%2C 101-120%2C 141-163%2C 183-202%2C214-236 and 246-268;gbkey=misc_feature;gene=rbn;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	41967	42035	.	+	.	ID=id65;Note=6 probable transmembrane helices predicted for YE0031 by TMHMM2.0 at aa 39-61%2C 101-120%2C 141-163%2C 183-202%2C214-236 and 246-268;gbkey=misc_feature;gene=rbn;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	42063	42131	.	+	.	ID=id65;Note=6 probable transmembrane helices predicted for YE0031 by TMHMM2.0 at aa 39-61%2C 101-120%2C 141-163%2C 183-202%2C214-236 and 246-268;gbkey=misc_feature;gene=rbn;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	42225	42662	.	+	.	ID=gene35;Name=YE0032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0032
AM286415.1	EMBL	CDS	42225	42662	.	+	0	ID=cds31;Parent=gene35;Dbxref=EnsemblGenomes-Gn:YE0032,EnsemblGenomes-Tr:CAL10177,GOA:A1JHU4,InterPro:IPR003732,InterPro:IPR023509,NCBI_GP:CAL10177.1;Name=CAL10177.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10177.1;transl_table=11
AM286415.1	EMBL	sequence_feature	42306	42659	.	+	.	ID=id66;Note=Pfam match to entry PF02580 DUF154%2C Uncharacterized ACR%2C COG1490%2C score 261.8%2C E-value 6e-76;gbkey=misc_feature;inference=protein motif:PFAM:PF02580
AM286415.1	EMBL	gene	42914	43837	.	+	.	ID=gene36;Name=YE0033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0033
AM286415.1	EMBL	CDS	42914	43837	.	+	0	ID=cds32;Parent=gene36;Dbxref=EnsemblGenomes-Gn:YE0033,EnsemblGenomes-Tr:CAL10178,GOA:A1JHU5,InterPro:IPR000182,InterPro:IPR012660,InterPro:IPR016181,InterPro:IPR029069,UniProtKB/TrEMBL:A1JHU5,NCBI_GP:CAL10178.1;Name=CAL10178.1;gbkey=CDS;product=conserved membrane protein;protein_id=CAL10178.1;transl_table=11
AM286415.1	EMBL	sequence_feature	43052	43282	.	+	.	ID=id67;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 63.3%2C E-value 3.3e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	sequence_feature	43184	43249	.	+	.	ID=id68;Note=Predicted helix-turn-helix motif with score 1005.000%2C SD 2.61 at aa 91-112%2C sequence MTLESVARQEGVKRVVCSARED;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	43517	43585	.	+	.	ID=id69;Note=1 probable transmembrane helix predicted for YE0033 by TMHMM2.0 at aa 202-224;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	44173	44418	.	+	.	ID=gene37;Name=YE0034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0034
AM286415.1	EMBL	CDS	44173	44418	.	+	0	ID=cds33;Parent=gene37;Dbxref=EnsemblGenomes-Gn:YE0034,EnsemblGenomes-Tr:CCP19173,GOA:K8FK39,InterPro:IPR010982,UniProtKB/TrEMBL:K8FK39,NCBI_GP:CCP19173.1;Name=CCP19173.1;gbkey=CDS;product=putative sugar fermentation stimulation protein;protein_id=CCP19173.1;transl_table=11
AM286415.1	EMBL	repeat_region	44408	45116	.	+	.	ID=id70;Note=repeat unit encoding a LuxR-family transcriptional regulator;gbkey=repeat_region
AM286415.1	EMBL	gene	44431	45117	.	+	.	ID=gene38;Name=YE0035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0035
AM286415.1	EMBL	CDS	44431	45117	.	+	0	ID=cds34;Parent=gene38;Dbxref=EnsemblGenomes-Gn:YE0035,EnsemblGenomes-Tr:CAL10179,GOA:A1JHU6,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR013656,InterPro:IPR016032,UniProtKB/TrEMBL:A1JHU6,NCBI_GP:CAL10179.1;Name=CAL10179.1;Note=Similar to Pseudomonas aeruginosa probable transcriptional regulator PA1347 SWALL:Q9I3Z7 (EMBL:AE004564) (230 aa) fasta scores: E(): 3e-09%2C 30.43 id in 207 aa%2C and to the C-terminal region of Vibrio cholerae LuxR family transcriptional regulator VCA1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 2.2e-10%2C 27.53 38d in 207 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004564;product=LuxR family transcription regulatory protein;protein_id=CAL10179.1;transl_table=11
AM286415.1	EMBL	sequence_feature	44872	45069	.	+	.	ID=id71;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 41.3%2C E-value 1.4e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	44926	44991	.	+	.	ID=id72;Note=Predicted helix-turn-helix motif with score 1060.000%2C SD 2.80 at aa 166-187%2C sequence FSSMEIATKLHLSSITVDNIIQ;gbkey=misc_feature
AM286415.1	EMBL	repeat_region	45117	45833	.	+	.	ID=id73;Note=repeat unit encoding a LuxR-family transcriptional regulator;gbkey=repeat_region
AM286415.1	EMBL	gene	45147	45833	.	+	.	ID=gene39;Name=YE0036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0036
AM286415.1	EMBL	CDS	45147	45833	.	+	0	ID=cds35;Parent=gene39;Dbxref=EnsemblGenomes-Gn:YE0036,EnsemblGenomes-Tr:CAL10180,GOA:A1JHU7,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JHU7,NCBI_GP:CAL10180.1;Name=CAL10180.1;Note=Similar to Pseudomonas aeruginosa probable transcriptional regulator PA1347 SWALL:Q9I3Z7 (EMBL:AE004564) (230 aa) fasta scores: E(): 2.2e-09%2C30.37 38d in 214 aa%2C and to the C-terminal region of Vibrio cholerae LuxR family transcriptional regulator VCA1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 6.6e-13%2C 30.43 38d in 207 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004564;product=LuxR family transcription regulatory protein;protein_id=CAL10180.1;transl_table=11
AM286415.1	EMBL	sequence_feature	45588	45785	.	+	.	ID=id74;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 49.3%2C E-value 5.5e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	45642	45707	.	+	.	ID=id75;Note=Predicted helix-turn-helix motif with score 2073.000%2C SD 6.25 at aa 166-187%2C sequence YSSKDIAKKLHISPRTVSNITQ;gbkey=misc_feature
AM286415.1	EMBL	repeat_region	45834	46549	.	+	.	ID=id76;Note=repeat unit encoding a LuxR-family transcriptional regulator;gbkey=repeat_region
AM286415.1	EMBL	gene	45863	46549	.	+	.	ID=gene40;Name=YE0037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0037
AM286415.1	EMBL	CDS	45863	46549	.	+	0	ID=cds36;Parent=gene40;Dbxref=EnsemblGenomes-Gn:YE0037,EnsemblGenomes-Tr:CAL10181,GOA:A1JHU8,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR013656,InterPro:IPR016032,UniProtKB/TrEMBL:A1JHU8,NCBI_GP:CAL10181.1;Name=CAL10181.1;Note=Similar to Pseudomonas aeruginosa probable transcriptional regulator PA347 SWALL:Q9I3Z7 (EMBL:AE004564) (230 aa) fasta scores: E(): 3.6e-10%2C30.47 38d in 210 aa%2C and to the C-terminal region of Vibrio cholerae LuxR family transcriptional regulator VCA1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 4.2e-10%2C 27.94 38d in 229 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004564;product=LuxR family transcription regulatory protein;protein_id=CAL10181.1;transl_table=11
AM286415.1	EMBL	sequence_feature	46304	46501	.	+	.	ID=id77;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 46.4%2C E-value 4.3e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	46358	46423	.	+	.	ID=id78;Note=Predicted helix-turn-helix motif with score 1813.000%2C SD 5.36 at aa 166-187%2C sequence YSSKDIAKKLHLSARTVSNITQ;gbkey=misc_feature
AM286415.1	EMBL	repeat_region	46550	47265	.	+	.	ID=id79;Note=repeat unit encoding a LuxR-family transcriptional regulator;gbkey=repeat_region
AM286415.1	EMBL	gene	46579	47265	.	+	.	ID=gene41;Name=YE0038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0038
AM286415.1	EMBL	CDS	46579	47265	.	+	0	ID=cds37;Parent=gene41;Dbxref=EnsemblGenomes-Gn:YE0038,EnsemblGenomes-Tr:CAL10182,GOA:A1JHU9,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR013656,InterPro:IPR016032,UniProtKB/TrEMBL:A1JHU9,NCBI_GP:CAL10182.1;Name=CAL10182.1;Note=Similar to Pseudomonas aeruginosa probable transcriptional regulator PA1347 SWALL:Q9I3Z7 (EMBL:AE004564) (230 aa) fasta scores: E(): 1e-09%2C 31.28 id in 211 aa%2C and to the C-terminal region of Vibrio cholerae LuxR family transcriptional regulator VCA1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 4.1e-10%2C 27.94 38d in 229 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004564;product=LuxR family transcription regulatory protein;protein_id=CAL10182.1;transl_table=11
AM286415.1	EMBL	sequence_feature	47020	47217	.	+	.	ID=id80;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 46.4%2C E-value 4.3e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	47074	47139	.	+	.	ID=id81;Note=Predicted helix-turn-helix motif with score 1813.000%2C SD 5.36 at aa 166-187%2C sequence YSSKDIAKKLHLSARTVSNITQ;gbkey=misc_feature
AM286415.1	EMBL	repeat_region	47266	47965	.	+	.	ID=id82;Note=repeat unit encoding a LuxR-family transcriptional regulator;gbkey=repeat_region
AM286415.1	EMBL	gene	47294	47980	.	+	.	ID=gene42;Name=YE0039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0039
AM286415.1	EMBL	CDS	47294	47980	.	+	0	ID=cds38;Parent=gene42;Dbxref=EnsemblGenomes-Gn:YE0039,EnsemblGenomes-Tr:CAL10183,GOA:A1JHV0,InterPro:IPR000014,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR013656,InterPro:IPR016032,UniProtKB/TrEMBL:A1JHV0,NCBI_GP:CAL10183.1;Name=CAL10183.1;Note=Similar to Pseudomonas aeruginosa probable transcriptional regulator PA1347 SWALL:Q9I3Z7 (EMBL:AE004564) (230 aa) fasta scores: E(): 3.8e-08%2C29.04 38d in 210 aa%2C and to Vibrio cholerae LuxR family transcriptional regulator VCA1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 2.9e-10%2C 28.5 id in 214 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004564;product=LuxR family transcription regulatory protein;protein_id=CAL10183.1;transl_table=11
AM286415.1	EMBL	sequence_feature	47735	47932	.	+	.	ID=id83;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 43.2%2C E-value 3.9e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	47789	47854	.	+	.	ID=id84;Note=Predicted helix-turn-helix motif with score 2197.000%2C SD 6.67 at aa 166-187%2C sequence YSSKDLAEKLHLSPRTVSNIIQ;gbkey=misc_feature
AM286415.1	EMBL	gene	48077	49786	.	-	.	ID=gene43;Name=YE0040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0040
AM286415.1	EMBL	CDS	48077	49786	.	-	0	ID=cds39;Parent=gene43;Dbxref=EnsemblGenomes-Gn:YE0040,EnsemblGenomes-Tr:CAL10184,InterPro:IPR007844,UniProtKB/TrEMBL:A1JHV1,NCBI_GP:CAL10184.1;Name=CAL10184.1;gbkey=CDS;product=possible exported protein;protein_id=CAL10184.1;transl_table=11
AM286415.1	EMBL	sequence_feature	49700	49768	.	-	.	ID=id85;Note=1 probable transmembrane helix predicted for YE0040 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	49933	51318	.	-	.	ID=gene44;Name=YE0041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0041
AM286415.1	EMBL	CDS	49933	51318	.	-	0	ID=cds40;Parent=gene44;Dbxref=EnsemblGenomes-Gn:YE0041,EnsemblGenomes-Tr:CAL10185,GOA:A1JHV2,InterPro:IPR006042,InterPro:IPR006043,UniProtKB/TrEMBL:A1JHV2,NCBI_GP:CAL10185.1;Name=CAL10185.1;gbkey=CDS;product=putative membrane permease;protein_id=CAL10185.1;transl_table=11
AM286415.1	EMBL	sequence_feature	51127	51195	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	50971	51039	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	50875	50943	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	50788	50856	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	50686	50745	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	50599	50667	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	50473	50541	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	50203	50271	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	50122	50190	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	50035	50103	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	49948	50007	.	-	.	ID=id86;Note=11 probable transmembrane helices predicted for YE0041 by TMHMM2.0 at aa 42-64%2C 94-116%2C 126-148%2C 155-177%2C192-211%2C 218-240%2C 260-282%2C 350-372%2C 377-399%2C 406-428 and 438-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	50038	51225	.	-	.	ID=id87;Note=Pfam match to entry PF00860 xan_ur_permease%2CPermease family%2C score 528.7%2C E-value 2.8e-156;gbkey=misc_feature;inference=protein motif:PFAM:PF00860
AM286415.1	EMBL	sequence_feature	50137	50199	.	-	.	ID=id88;Note=PS01116 Xanthine/uracil permeases family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01116
AM286415.1	EMBL	sequence_feature	50689	50736	.	-	.	ID=id89;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00038
AM286415.1	EMBL	sequence_feature	50899	50931	.	-	.	ID=id90;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	51202	51234	.	-	.	ID=id91;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	51557	52771	.	+	.	ID=gene45;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;gene_synonym=gltC;locus_tag=YE0042
AM286415.1	EMBL	CDS	51557	52771	.	+	0	ID=cds41;Parent=gene45;Dbxref=EnsemblGenomes-Gn:YE0042,EnsemblGenomes-Tr:CAL10186,GOA:A1JHV3,InterPro:IPR004445,UniProtKB/TrEMBL:A1JHV3,NCBI_GP:CAL10186.1;Name=CAL10186.1;gbkey=CDS;gene=gltS;product=sodium/glutamate symport carrier protein;protein_id=CAL10186.1;transl_table=11
AM286415.1	EMBL	sequence_feature	51560	52654	.	+	.	ID=id92;Note=Pfam match to entry PF03616 Glt_symporter%2CSodium/glutamate symporter%2C score 808.3%2C E-value 1.8e-240;gbkey=misc_feature;gene=gltS;inference=protein motif:PFAM:PF03616
AM286415.1	EMBL	sequence_feature	51566	51619	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	51653	51706	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	51764	51817	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	51836	51904	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	52025	52093	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	52193	52261	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	52289	52357	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	52376	52432	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	52460	52528	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	52562	52630	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	52658	52726	.	+	.	ID=id93;Note=11 probable transmembrane helices predicted for YE0042 by TMHMM2.0 at aa 4-21%2C 33-50%2C 70-87%2C 94-116%2C157-179%2C 213-235%2C 245-267%2C 274-292%2C 302-324%2C 336-358 and 368-390;gbkey=misc_feature;gene=gltS;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	52840	54921	.	-	.	ID=gene46;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=YE0043
AM286415.1	EMBL	CDS	52840	54921	.	-	0	ID=cds42;Parent=gene46;Dbxref=EnsemblGenomes-Gn:YE0043,EnsemblGenomes-Tr:CAL10187,GOA:A1JHV4,InterPro:IPR001650,InterPro:IPR004365,InterPro:IPR004609,InterPro:IPR011545,InterPro:IPR012340,InterPro:IPR014001,InterPro:IPR027417,UniProtKB/TrEMBL:A1JHV4,NCBI_GP:CAL10187.1;Name=CAL10187.1;gbkey=CDS;gene=recG;product=ATP-dependent DNA helicase;protein_id=CAL10187.1;transl_table=11
AM286415.1	EMBL	sequence_feature	53155	53373	.	-	.	ID=id94;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 79.9%2C E-value 3.4e-21;gbkey=misc_feature;gene=recG;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	53545	54147	.	-	.	ID=id95;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 123.2%2C E-value 3.1e-34;gbkey=misc_feature;gene=recG;inference=protein motif:PFAM:PF00270
AM286415.1	EMBL	sequence_feature	54013	54036	.	-	.	ID=id96;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=recG;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	54514	54738	.	-	.	ID=id97;Note=Pfam match to entry PF01336 tRNA_anti%2C OB-fold nucleic acid binding domain%2C score 34.6%2C E-value 1.5e-07;gbkey=misc_feature;gene=recG;inference=protein motif:PFAM:PF01336
AM286415.1	EMBL	gene	54922	55614	.	-	.	ID=gene47;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;gene_synonym=spoU;locus_tag=YE0044
AM286415.1	EMBL	CDS	54922	55614	.	-	0	ID=cds43;Parent=gene47;Dbxref=EnsemblGenomes-Gn:YE0044,EnsemblGenomes-Tr:CAL10188,GOA:A1JHV5,InterPro:IPR001537,InterPro:IPR022724,InterPro:IPR029026,InterPro:IPR029028,UniProtKB/TrEMBL:A1JHV5,NCBI_GP:CAL10188.1;Name=CAL10188.1;gbkey=CDS;gene=trmH;product=tRNA (guanosine-2'-O-)-methyltransferase;protein_id=CAL10188.1;transl_table=11
AM286415.1	EMBL	sequence_feature	55138	55560	.	-	.	ID=id98;Note=Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family%2C score 188.6%2C E-value 6.6e-54;gbkey=misc_feature;gene=trmH;inference=protein motif:PFAM:PF00588
AM286415.1	EMBL	gene	55620	57722	.	-	.	ID=gene48;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=YE0045
AM286415.1	EMBL	CDS	55620	57722	.	-	0	ID=cds44;Parent=gene48;Dbxref=EnsemblGenomes-Gn:YE0045,EnsemblGenomes-Tr:CAL10189,GOA:A1JHV6,InterPro:IPR002912,InterPro:IPR003607,InterPro:IPR004095,InterPro:IPR004811,InterPro:IPR007685,InterPro:IPR012675,InterPro:IPR012676,UniProtKB/TrEMBL:A1JHV6,NCBI_GP:CAL10189.1;Name=CAL10189.1;gbkey=CDS;gene=spoT;product=guanosine-3'%2C5'-bisbis(diphosphate) 3'-pyrophosphydrolase;protein_id=CAL10189.1;transl_table=11
AM286415.1	EMBL	sequence_feature	55629	55850	.	-	.	ID=id99;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 15.3%2C E-value 0.097;gbkey=misc_feature;gene=spoT;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	sequence_feature	56382	56573	.	-	.	ID=id100;Note=Pfam match to entry PF02824 TGS%2C TGS domain%2C score 110.2%2C E-value 2.6e-30;gbkey=misc_feature;gene=spoT;inference=protein motif:PFAM:PF02824
AM286415.1	EMBL	sequence_feature	57291	57590	.	-	.	ID=id101;Note=Pfam match to entry PF01966 HD%2C HD domain%2C score 74.5%2C E-value 1.4e-19;gbkey=misc_feature;gene=spoT;inference=protein motif:PFAM:PF01966
AM286415.1	EMBL	sequence_feature	57561	57593	.	-	.	ID=id102;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=spoT;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	57741	58016	.	-	.	ID=gene49;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=YE0046
AM286415.1	EMBL	CDS	57741	58016	.	-	0	ID=cds45;Parent=gene49;Dbxref=EnsemblGenomes-Gn:YE0046,EnsemblGenomes-Tr:CAL10190,GOA:A1JHV7,InterPro:IPR003716,InterPro:IPR006110,InterPro:IPR012293,NCBI_GP:CAL10190.1;Name=CAL10190.1;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase%2C omega chain;protein_id=CAL10190.1;transl_table=11
AM286415.1	EMBL	sequence_feature	57822	57983	.	-	.	ID=id103;Note=Pfam match to entry PF01192 RNA_pol_Rpb6%2C RNA polymerase Rpb6%2C score 78.8%2C E-value 7.6e-21;gbkey=misc_feature;gene=rpoZ;inference=protein motif:PFAM:PF01192
AM286415.1	EMBL	gene	58071	58694	.	-	.	ID=gene50;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;gene_synonym=spoR;locus_tag=YE0047
AM286415.1	EMBL	CDS	58071	58694	.	-	0	ID=cds46;Parent=gene50;Dbxref=EnsemblGenomes-Gn:YE0047,EnsemblGenomes-Tr:CAL10191,GOA:A1JHV8,InterPro:IPR008144,InterPro:IPR008145,InterPro:IPR017665,InterPro:IPR020590,InterPro:IPR027417,UniProtKB/TrEMBL:A1JHV8,NCBI_GP:CAL10191.1;Name=CAL10191.1;gbkey=CDS;gene=gmk;product=guanylate kinase;protein_id=CAL10191.1;transl_table=11
AM286415.1	EMBL	sequence_feature	58260	58574	.	-	.	ID=id104;Note=Pfam match to entry PF00625 Guanylate_kin%2CGuanylate kinase%2C score 198.3%2C E-value 7.9e-57;gbkey=misc_feature;gene=gmk;inference=protein motif:PFAM:PF00625
AM286415.1	EMBL	sequence_feature	58524	58577	.	-	.	ID=id105;Note=PS00856 Guanylate kinase signature.;gbkey=misc_feature;gene=gmk;inference=protein motif:Prosite:PS00856
AM286415.1	EMBL	sequence_feature	58641	58664	.	-	.	ID=id106;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=gmk;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	58977	60674	.	+	.	ID=gene51;Name=YE0048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0048
AM286415.1	EMBL	CDS	58977	60674	.	+	0	ID=cds47;Parent=gene51;Dbxref=EnsemblGenomes-Gn:YE0048,EnsemblGenomes-Tr:CAL10192,GOA:A1JHV9,InterPro:IPR003583,InterPro:IPR004150,InterPro:IPR010994,InterPro:IPR012340,InterPro:IPR013839,InterPro:IPR013840,InterPro:IPR020923,NCBI_GP:CAL10192.1;Name=CAL10192.1;gbkey=CDS;product=putative DNA ligase;protein_id=CAL10192.1;transl_table=11
AM286415.1	EMBL	sequence_feature	59073	59918	.	+	.	ID=id107;Note=Pfam match to entry PF01653 DNA_ligase_N%2CNAD-dependent DNA ligase adenylation domain%2C score 109.4%2CE-value 4.4e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF01653
AM286415.1	EMBL	sequence_feature	59922	60176	.	+	.	ID=id108;Note=Pfam match to entry PF03120 DNA_ligase_OB%2CNAD-dependent DNA ligase OB-fold domain%2C score 73.6%2CE-value 2.7e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF03120
AM286415.1	EMBL	gene	60692	61309	.	-	.	ID=gene52;Name=YE0049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0049
AM286415.1	EMBL	CDS	60692	61309	.	-	0	ID=cds48;Parent=gene52;Dbxref=EnsemblGenomes-Gn:YE0049,EnsemblGenomes-Tr:CAL10193,InterPro:IPR005115,UniProtKB/TrEMBL:A1JHW0,NCBI_GP:CAL10193.1;Name=CAL10193.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10193.1;transl_table=11
AM286415.1	EMBL	sequence_feature	61244	61297	.	-	.	ID=id109;Note=7 probable transmembrane helices predicted for YE0049 by TMHMM2.0 at aa 5-22%2C 29-51%2C 64-81%2C 88-107%2C111-133%2C 140-162 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	61157	61225	.	-	.	ID=id109;Note=7 probable transmembrane helices predicted for YE0049 by TMHMM2.0 at aa 5-22%2C 29-51%2C 64-81%2C 88-107%2C111-133%2C 140-162 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	61067	61120	.	-	.	ID=id109;Note=7 probable transmembrane helices predicted for YE0049 by TMHMM2.0 at aa 5-22%2C 29-51%2C 64-81%2C 88-107%2C111-133%2C 140-162 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	60989	61048	.	-	.	ID=id109;Note=7 probable transmembrane helices predicted for YE0049 by TMHMM2.0 at aa 5-22%2C 29-51%2C 64-81%2C 88-107%2C111-133%2C 140-162 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	60911	60979	.	-	.	ID=id109;Note=7 probable transmembrane helices predicted for YE0049 by TMHMM2.0 at aa 5-22%2C 29-51%2C 64-81%2C 88-107%2C111-133%2C 140-162 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	60824	60892	.	-	.	ID=id109;Note=7 probable transmembrane helices predicted for YE0049 by TMHMM2.0 at aa 5-22%2C 29-51%2C 64-81%2C 88-107%2C111-133%2C 140-162 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	60743	60796	.	-	.	ID=id109;Note=7 probable transmembrane helices predicted for YE0049 by TMHMM2.0 at aa 5-22%2C 29-51%2C 64-81%2C 88-107%2C111-133%2C 140-162 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	60791	61045	.	-	.	ID=id110;Note=Pfam match to entry PF03458 UPF0126%2C UPF0126 domain%2C score 130.6%2C E-value 1.9e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF03458
AM286415.1	EMBL	sequence_feature	61046	61303	.	-	.	ID=id111;Note=Pfam match to entry PF03458 UPF0126%2C UPF0126 domain%2C score 138.7%2C E-value 6.7e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF03458
AM286415.1	EMBL	gene	61529	62080	.	+	.	ID=gene53;Name=YE0050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0050
AM286415.1	EMBL	CDS	61529	62080	.	+	0	ID=cds49;Parent=gene53;Dbxref=EnsemblGenomes-Gn:YE0050,EnsemblGenomes-Tr:CAL10194,InterPro:IPR021957,UniProtKB/TrEMBL:A1JHW1,NCBI_GP:CAL10194.1;Name=CAL10194.1;Note=Poor database matches. Similar to an internal region of Halobacterium sp. hypothetical protein VNG2239c SWALL:Q9HN60 (EMBL:AE005109) (308 aa) fasta scores: E(): 2.7%2C 29.37 38d in 143 aa. Possible alternative translational start sites;gbkey=CDS;inference=similar to sequence:INSDC:AE005109;product=putative membrane protein;protein_id=CAL10194.1;transl_table=11
AM286415.1	EMBL	sequence_feature	61565	61624	.	+	.	ID=id112;Note=2 probable transmembrane helices predicted for YE0050 by TMHMM2.0 at aa 13-32 and 36-58;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	61634	61702	.	+	.	ID=id112;Note=2 probable transmembrane helices predicted for YE0050 by TMHMM2.0 at aa 13-32 and 36-58;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	62176	63360	.	-	.	ID=gene54;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;gene_synonym=cru;locus_tag=YE0051
AM286415.1	EMBL	CDS	62176	63360	.	-	0	ID=cds50;Parent=gene54;Dbxref=EnsemblGenomes-Gn:YE0051,EnsemblGenomes-Tr:CAL10195,GOA:A1JHW2,InterPro:IPR002668,InterPro:IPR008276,InterPro:IPR011657,UniProtKB/TrEMBL:A1JHW2,NCBI_GP:CAL10195.1;Name=CAL10195.1;Note=Similar to Escherichia coli nucleoside permease NupC or Cru SWALL:NUPC_ECOLI (SWALL:P33031) (400 aa) fasta scores: E(): 4.2e-106%2C 71.75 38d in 400 aa%2C and to Salmonella typhi nucleoside permease STY2650 SWALL:Q8Z4X4 (EMBL:AL627274) (400 aa) fasta scores: E(): 7.5e-106%2C71.75 38d in 400 aa;gbkey=CDS;gene=nupC;inference=similar to sequence:UniProtKB:P33031;product=nucleoside permease;protein_id=CAL10195.1;transl_table=11
AM286415.1	EMBL	sequence_feature	62179	63357	.	-	.	ID=id113;Note=Pfam match to entry PF01773 Nucleoside_tra2%2C Na+ dependent nucleoside transporter%2C score 597.4%2C E-value 5.8e-177;gbkey=misc_feature;gene=nupC;inference=protein motif:PFAM:PF01773
AM286415.1	EMBL	sequence_feature	63292	63351	.	-	.	ID=id114;Note=9 probable transmembrane helices predicted for YE0051 by TMHMM2.0 at aa 4-23%2C 30-49%2C 86-108%2C 167-189%2C193-215%2C 241-263%2C 273-295%2C 334-356 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	63214	63273	.	-	.	ID=id114;Note=9 probable transmembrane helices predicted for YE0051 by TMHMM2.0 at aa 4-23%2C 30-49%2C 86-108%2C 167-189%2C193-215%2C 241-263%2C 273-295%2C 334-356 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	63037	63105	.	-	.	ID=id114;Note=9 probable transmembrane helices predicted for YE0051 by TMHMM2.0 at aa 4-23%2C 30-49%2C 86-108%2C 167-189%2C193-215%2C 241-263%2C 273-295%2C 334-356 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	62794	62862	.	-	.	ID=id114;Note=9 probable transmembrane helices predicted for YE0051 by TMHMM2.0 at aa 4-23%2C 30-49%2C 86-108%2C 167-189%2C193-215%2C 241-263%2C 273-295%2C 334-356 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	62716	62784	.	-	.	ID=id114;Note=9 probable transmembrane helices predicted for YE0051 by TMHMM2.0 at aa 4-23%2C 30-49%2C 86-108%2C 167-189%2C193-215%2C 241-263%2C 273-295%2C 334-356 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	62572	62640	.	-	.	ID=id114;Note=9 probable transmembrane helices predicted for YE0051 by TMHMM2.0 at aa 4-23%2C 30-49%2C 86-108%2C 167-189%2C193-215%2C 241-263%2C 273-295%2C 334-356 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	62476	62544	.	-	.	ID=id114;Note=9 probable transmembrane helices predicted for YE0051 by TMHMM2.0 at aa 4-23%2C 30-49%2C 86-108%2C 167-189%2C193-215%2C 241-263%2C 273-295%2C 334-356 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	62293	62361	.	-	.	ID=id114;Note=9 probable transmembrane helices predicted for YE0051 by TMHMM2.0 at aa 4-23%2C 30-49%2C 86-108%2C 167-189%2C193-215%2C 241-263%2C 273-295%2C 334-356 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	62182	62250	.	-	.	ID=id114;Note=9 probable transmembrane helices predicted for YE0051 by TMHMM2.0 at aa 4-23%2C 30-49%2C 86-108%2C 167-189%2C193-215%2C 241-263%2C 273-295%2C 334-356 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	63619	64512	.	+	.	ID=gene55;Name=YE0052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0052
AM286415.1	EMBL	CDS	63619	64512	.	+	0	ID=cds51;Parent=gene55;Dbxref=EnsemblGenomes-Gn:YE0052,EnsemblGenomes-Tr:CAL10196,GOA:A1JHW3,InterPro:IPR001753,InterPro:IPR029045,UniProtKB/TrEMBL:A1JHW3,NCBI_GP:CAL10196.1;Name=CAL10196.1;Note=Similar to Escherichia coli probable enoyl-CoA hydratase PaaF SWALL:PAAF_ECOLI (SWALL:P76082) (255 aa) fasta scores: E(): 2.5e-06%2C 27.66 38d in 253 aa%2C and to Xanthomonas campestris RpfF protein%2C mutants of which are unable to produce a diffusible extracellular factor which regulates synthesis of extracellular enzymes and modulates virulence SWALL:O05175 (EMBL:Y09701) (289 aa) fasta scores: E(): 1.2e-27%2C 34.02 38d in 288 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76082;product=enoyl-CoA hydratase/isomerase family protein;protein_id=CAL10196.1;transl_table=11
AM286415.1	EMBL	sequence_feature	63745	64269	.	+	.	ID=id115;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 25.7%2C E-value 2.7e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00378
AM286415.1	EMBL	gene	64538	66532	.	-	.	ID=gene56;Name=YE0053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0053
AM286415.1	EMBL	CDS	64538	66532	.	-	0	ID=cds52;Parent=gene56;Dbxref=EnsemblGenomes-Gn:YE0053,EnsemblGenomes-Tr:CAL10197,GOA:A1JHW4,InterPro:IPR000014,InterPro:IPR000160,InterPro:IPR001633,InterPro:IPR029787,UniProtKB/TrEMBL:A1JHW4,NCBI_GP:CAL10197.1;Name=CAL10197.1;Note=Similar to Escherichia coli hypothetical protein YciR SWALL:YCIR_ECOLI (SWALL:P77334) (661 aa) fasta scores: E(): 3.9e-156%2C 60.61 38d in 650 aa%2C and to Salmonella typhi hypothetical protein STY1349 SWALL:Q8Z7D0 (EMBL:AL627270) (660 aa) fasta scores: E(): 1.3e-152%2C60.24 38d in 654 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77334;product=putative signalling protein;protein_id=CAL10197.1;transl_table=11
AM286415.1	EMBL	sequence_feature	64586	65323	.	-	.	ID=id116;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score 401.0%2C E-value 7.4e-118;gbkey=misc_feature;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	sequence_feature	65363	65839	.	-	.	ID=id117;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 195.5%2C E-value 5.2e-56;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	66056	66205	.	-	.	ID=id118;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 22.5%2C E-value 8.3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	gene	67055	67885	.	-	.	ID=gene57;Name=YE0055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0055
AM286415.1	EMBL	CDS	67055	67885	.	-	0	ID=cds53;Parent=gene57;Dbxref=EnsemblGenomes-Gn:YE0055,EnsemblGenomes-Tr:CAL10198,InterPro:IPR001279,UniProtKB/TrEMBL:A1JHW5,NCBI_GP:CAL10198.1;Name=CAL10198.1;Note=Similar to Methanosarcina acetivorans metallo-beta-lactamase superfamily protein MA1962 SWALL:AAM05365 (EMBL:AE010879) (280 aa) fasta scores: E(): 3e-44%2C 44.84 38d in 281 aa%2C and to Clostridium acetobutylicum metal-dependent hydrolase of the beta-lactamase superfamily II CAC0535 SWALL:Q97LM2 (EMBL:AE007569) (268 aa) fasta scores: E(): 2.8e-41%2C41.66 38d in 276 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE010879;product=metallo-beta-lactamase superfamily protein;protein_id=CAL10198.1;transl_table=11
AM286415.1	EMBL	sequence_feature	67139	67837	.	-	.	ID=id119;Note=Pfam match to entry PF00753 lactamase_B%2CMetallo-beta-lactamase superfamily%2C score 11.7%2C E-value 0.00023;gbkey=misc_feature;inference=protein motif:PFAM:PF00753
AM286415.1	EMBL	sequence_feature	67406	67429	.	-	.	ID=id120;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	68287	69150	.	-	.	ID=gene58;Name=YE0057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0057
AM286415.1	EMBL	CDS	68287	69150	.	-	0	ID=cds54;Parent=gene58;Dbxref=EnsemblGenomes-Gn:YE0057,EnsemblGenomes-Tr:CAL10199,InterPro:IPR005229,InterPro:IPR013527,InterPro:IPR013551,UniProtKB/TrEMBL:A1JHW6,NCBI_GP:CAL10199.1;Name=CAL10199.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10199.1;transl_table=11
AM286415.1	EMBL	sequence_feature	68686	69147	.	-	.	ID=id121;Note=Pfam match to entry PF03755 YicC_N-term%2C YicC-like family%2C N-terminal region%2C score 272.9%2C E-value 2.8e-79;gbkey=misc_feature;inference=protein motif:PFAM:PF03755
AM286415.1	EMBL	gene	69277	69993	.	+	.	ID=gene59;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=YE0058
AM286415.1	EMBL	CDS	69277	69993	.	+	0	ID=cds55;Parent=gene59;Dbxref=EnsemblGenomes-Gn:YE0058,EnsemblGenomes-Tr:CAL10200,GOA:A1JHW7,InterPro:IPR001247,InterPro:IPR002381,InterPro:IPR015847,InterPro:IPR018336,InterPro:IPR020568,InterPro:IPR027408,NCBI_GP:CAL10200.1;Name=CAL10200.1;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=CAL10200.1;transl_table=11
AM286415.1	EMBL	sequence_feature	69304	69705	.	+	.	ID=id122;Note=Pfam match to entry PF01138 RNase_PH%2C 3' exoribonuclease family%2C domain 1%2C score 196.1%2C E-value 3.5e-56;gbkey=misc_feature;gene=rph;inference=protein motif:PFAM:PF01138
AM286415.1	EMBL	sequence_feature	69622	69660	.	+	.	ID=id123;Note=PS01277 Ribonuclease PH signature.;gbkey=misc_feature;gene=rph;inference=protein motif:Prosite:PS01277
AM286415.1	EMBL	sequence_feature	69745	69948	.	+	.	ID=id124;Note=Pfam match to entry PF03725 RNase_PH_C%2C 3' exoribonuclease family%2C domain 2%2C score 73.9%2C E-value 2.2e-19;gbkey=misc_feature;gene=rph;inference=protein motif:PFAM:PF03725
AM286415.1	EMBL	gene	70145	70786	.	+	.	ID=gene60;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=YE0059
AM286415.1	EMBL	CDS	70145	70786	.	+	0	ID=cds56;Parent=gene60;Dbxref=EnsemblGenomes-Gn:YE0059,EnsemblGenomes-Tr:CAL10201,GOA:A1JHW8,InterPro:IPR000836,InterPro:IPR004467,InterPro:IPR023031,InterPro:IPR029057,NCBI_GP:CAL10201.1;Name=CAL10201.1;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=CAL10201.1;transl_table=11
AM286415.1	EMBL	sequence_feature	70238	70699	.	+	.	ID=id125;Note=Pfam match to entry PF00156 Pribosyltran%2CPhosphoribosyl transferase domain%2C score 103.2%2C E-value 3.2e-28;gbkey=misc_feature;gene=pyrE;inference=protein motif:PFAM:PF00156
AM286415.1	EMBL	sequence_feature	70502	70540	.	+	.	ID=id126;Note=PS00103 Purine/pyrimidine phosphoribosyl transferases signature.;gbkey=misc_feature;gene=pyrE;inference=protein motif:Prosite:PS00103
AM286415.1	EMBL	gene	70864	71460	.	-	.	ID=gene61;Name=ttk;gbkey=Gene;gene=ttk;gene_biotype=protein_coding;locus_tag=YE0060
AM286415.1	EMBL	CDS	70864	71460	.	-	0	ID=cds57;Parent=gene61;Dbxref=EnsemblGenomes-Gn:YE0060,EnsemblGenomes-Tr:CAL10202,GOA:A1JHW9,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR015893,InterPro:IPR023769,InterPro:IPR023772,NCBI_GP:CAL10202.1;Name=CAL10202.1;gbkey=CDS;gene=ttk;product=TetR-family regulatory protein;protein_id=CAL10202.1;transl_table=11
AM286415.1	EMBL	sequence_feature	71275	71418	.	-	.	ID=id127;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 41.0%2C E-value 1.7e-09;gbkey=misc_feature;gene=ttk;inference=protein motif:PFAM:PF00440
AM286415.1	EMBL	sequence_feature	71287	71379	.	-	.	ID=id128;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;gbkey=misc_feature;gene=ttk;inference=protein motif:Prosite:PS01081
AM286415.1	EMBL	sequence_feature	71302	71367	.	-	.	ID=id129;Note=Predicted helix-turn-helix motif with score 1905.000%2C SD 5.68 at aa 32-53%2C sequence ITTAKLAANVGVSEAALYRHFP;gbkey=misc_feature;gene=ttk
AM286415.1	EMBL	gene	71581	72036	.	-	.	ID=gene62;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;gene_synonym=dnaS,sof;locus_tag=YE0061
AM286415.1	EMBL	CDS	71581	72036	.	-	0	ID=cds58;Parent=gene62;Dbxref=EnsemblGenomes-Gn:YE0061,EnsemblGenomes-Tr:CAL10203,GOA:A1JHX0,InterPro:IPR008180,InterPro:IPR008181,InterPro:IPR029054,NCBI_GP:CAL10203.1;Name=CAL10203.1;gbkey=CDS;gene=dut;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=CAL10203.1;transl_table=11
AM286415.1	EMBL	sequence_feature	71590	71994	.	-	.	ID=id130;Note=Pfam match to entry PF00692 dUTPase%2C dUTPase %2Cscore 180.9%2C E-value 1.3e-51;gbkey=misc_feature;gene=dut;inference=protein motif:PFAM:PF00692
AM286415.1	EMBL	gene	72017	73204	.	-	.	ID=gene63;Name=dfp;gbkey=Gene;gene=dfp;gene_biotype=protein_coding;locus_tag=YE0062
AM286415.1	EMBL	CDS	72017	73204	.	-	0	ID=cds59;Parent=gene63;Dbxref=EnsemblGenomes-Gn:YE0062,EnsemblGenomes-Tr:CAL10204,GOA:A1JHX1,InterPro:IPR003382,InterPro:IPR005252,InterPro:IPR007085,UniProtKB/TrEMBL:A1JHX1,NCBI_GP:CAL10204.1;Name=CAL10204.1;gbkey=CDS;gene=dfp;product=DNA/pantothenate metabolism flavoprotein;protein_id=CAL10204.1;transl_table=11
AM286415.1	EMBL	sequence_feature	72407	72439	.	-	.	ID=id131;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=dfp;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	72860	73201	.	-	.	ID=id132;Note=Pfam match to entry PF02441 Flavoprotein%2CFlavoprotein%2C score 147.6%2C E-value 1.5e-41;gbkey=misc_feature;gene=dfp;inference=protein motif:PFAM:PF02441
AM286415.1	EMBL	gene	73442	74110	.	+	.	ID=gene64;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=YE0063
AM286415.1	EMBL	CDS	73442	74110	.	+	0	ID=cds60;Parent=gene64;Dbxref=EnsemblGenomes-Gn:YE0063,EnsemblGenomes-Tr:CAL10205,InterPro:IPR001405,InterPro:IPR010994,InterPro:IPR020891,InterPro:IPR022820,InterPro:IPR025657,NCBI_GP:CAL10205.1;Name=CAL10205.1;gbkey=CDS;gene=radC;product=putative DNA repair protein;protein_id=CAL10205.1;transl_table=11
AM286415.1	EMBL	sequence_feature	73733	74107	.	+	.	ID=id133;Note=Pfam match to entry PF04002 RadC%2C RadC%2C DNA repair protein%2C score 263.4%2C E-value 2e-76;gbkey=misc_feature;gene=radC;inference=protein motif:PFAM:PF04002
AM286415.1	EMBL	sequence_feature	73952	73969	.	+	.	ID=id134;Note=PS01302 DNA repair protein radC family signature.;gbkey=misc_feature;gene=radC;inference=protein motif:Prosite:PS01302
AM286415.1	EMBL	gene	74374	74610	.	+	.	ID=gene65;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=YE0064
AM286415.1	EMBL	CDS	74374	74610	.	+	0	ID=cds61;Parent=gene65;Dbxref=EnsemblGenomes-Gn:YE0064,EnsemblGenomes-Tr:CAL10206,GOA:A1JHR2,InterPro:IPR001383,InterPro:IPR026569,NCBI_GP:CAL10206.1;Name=CAL10206.1;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=CAL10206.1;transl_table=11
AM286415.1	EMBL	sequence_feature	74380	74562	.	+	.	ID=id135;Note=Pfam match to entry PF00830 Ribosomal_L28%2CRibosomal L28 family%2C score 133.2%2C E-value 3.1e-37;gbkey=misc_feature;gene=rpmB;inference=protein motif:PFAM:PF00830
AM286415.1	EMBL	gene	74622	74789	.	+	.	ID=gene66;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=YE0065
AM286415.1	EMBL	CDS	74622	74789	.	+	0	ID=cds62;Parent=gene66;Dbxref=EnsemblGenomes-Gn:YE0065,EnsemblGenomes-Tr:CAL10207,GOA:A1JHR4,InterPro:IPR001705,InterPro:IPR011332,InterPro:IPR018264,NCBI_GP:CAL10207.1;Name=CAL10207.1;gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=CAL10207.1;transl_table=11
AM286415.1	EMBL	sequence_feature	74637	74780	.	+	.	ID=id136;Note=Pfam match to entry PF00471 Ribosomal_L33%2CRibosomal protein L33%2C score 94.5%2C E-value 1.3e-25;gbkey=misc_feature;gene=rpmG;inference=protein motif:PFAM:PF00471
AM286415.1	EMBL	sequence_feature	74682	74741	.	+	.	ID=id137;Note=PS00582 Ribosomal protein L33 signature.;gbkey=misc_feature;gene=rpmG;inference=protein motif:Prosite:PS00582
AM286415.1	EMBL	gene	74876	75685	.	+	.	ID=gene67;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;gene_synonym=fpg;locus_tag=YE0066
AM286415.1	EMBL	CDS	74876	75685	.	+	0	ID=cds63;Parent=gene67;Dbxref=EnsemblGenomes-Gn:YE0066,EnsemblGenomes-Tr:CAL10208,GOA:A1JHR7,InterPro:IPR000191,InterPro:IPR000214,InterPro:IPR010663,InterPro:IPR010979,InterPro:IPR012319,InterPro:IPR015886,InterPro:IPR015887,InterPro:IPR020629,NCBI_GP:CAL10208.1;Name=CAL10208.1;gbkey=CDS;gene=mutM;product=formamidopyrimidine-DNA glycosylase;protein_id=CAL10208.1;transl_table=11
AM286415.1	EMBL	sequence_feature	74876	75679	.	+	.	ID=id138;Note=Pfam match to entry PF01149 Fapy_DNA_glyco%2CFormamidopyrimidine-DNA glycosylase%2C score 483.1%2C E-value 1.4e-142;gbkey=misc_feature;gene=mutM;inference=protein motif:PFAM:PF01149
AM286415.1	EMBL	gene	75792	76271	.	-	.	ID=gene68;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;gene_synonym=kdtB;locus_tag=YE0067
AM286415.1	EMBL	CDS	75792	76271	.	-	0	ID=cds64;Parent=gene68;Dbxref=EnsemblGenomes-Gn:YE0067,EnsemblGenomes-Tr:CAL10209,GOA:A1JHR9,InterPro:IPR001980,InterPro:IPR004821,InterPro:IPR014729,NCBI_GP:CAL10209.1;Name=CAL10209.1;gbkey=CDS;gene=coaD;product=phosphopantetheine adenylyltransferase;protein_id=CAL10209.1;transl_table=11
AM286415.1	EMBL	sequence_feature	75870	76268	.	-	.	ID=id139;Note=Pfam match to entry PF01467 CTP_transf_2%2CCytidylyltransferase%2C score 151.3%2C E-value 1.1e-42;gbkey=misc_feature;gene=coaD;inference=protein motif:PFAM:PF01467
AM286415.1	EMBL	gene	76268	77050	.	-	.	ID=gene69;Name=kdtX;gbkey=Gene;gene=kdtX;gene_biotype=protein_coding;gene_synonym=waaE;locus_tag=YE0068
AM286415.1	EMBL	CDS	76268	77050	.	-	0	ID=cds65;Parent=gene69;Dbxref=EnsemblGenomes-Gn:YE0068,EnsemblGenomes-Tr:CAL10210,GOA:A1JHS0,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:A1JHS0,NCBI_GP:CAL10210.1;Name=CAL10210.1;gbkey=CDS;gene=kdtX;product=lipopolysaccharide core biosynthesis glycosyl transferase;protein_id=CAL10210.1;transl_table=11
AM286415.1	EMBL	sequence_feature	76565	77029	.	-	.	ID=id140;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 88.5%2C E-value 8.8e-24;gbkey=misc_feature;gene=kdtX;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	77051	78328	.	-	.	ID=gene70;Name=kdtA;gbkey=Gene;gene=kdtA;gene_biotype=protein_coding;gene_synonym=waaA;locus_tag=YE0069
AM286415.1	EMBL	CDS	77051	78328	.	-	0	ID=cds66;Parent=gene70;Dbxref=EnsemblGenomes-Gn:YE0069,EnsemblGenomes-Tr:CAL10211,GOA:A1JHX3,InterPro:IPR001296,InterPro:IPR007507,UniProtKB/TrEMBL:A1JHX3,NCBI_GP:CAL10211.1;Name=CAL10211.1;gbkey=CDS;gene=kdtA;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=CAL10211.1;transl_table=11
AM286415.1	EMBL	sequence_feature	77126	77638	.	-	.	ID=id141;Note=Pfam match to entry PF00534 Glycos_transf_1%2CGlycosyl transferases group 1%2C score 20.0%2C E-value 1.6e-06;gbkey=misc_feature;gene=kdtA;inference=protein motif:PFAM:PF00534
AM286415.1	EMBL	gene	78869	79834	.	-	.	ID=gene71;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;gene_synonym=rfa-2,waaC;locus_tag=YE0070
AM286415.1	EMBL	CDS	78869	79834	.	-	0	ID=cds67;Parent=gene71;Dbxref=EnsemblGenomes-Gn:YE0070,EnsemblGenomes-Tr:CAL10212,GOA:A1JHX4,InterPro:IPR002201,InterPro:IPR011908,UniProtKB/TrEMBL:A1JHX4,NCBI_GP:CAL10212.1;Name=CAL10212.1;gbkey=CDS;gene=rfaC;product=lipopolysaccharide heptosyltransferase-1;protein_id=CAL10212.1;transl_table=11
AM286415.1	EMBL	sequence_feature	78884	79612	.	-	.	ID=id142;Note=Pfam match to entry PF01075 Glyco_transf_9%2CGlycosyltransferase family 9 (heptosyltransferase)%2C score 316.4%2C E-value 2.1e-92;gbkey=misc_feature;gene=rfaC;inference=protein motif:PFAM:PF01075
AM286415.1	EMBL	gene	79834	80898	.	-	.	ID=gene72;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;gene_synonym=waaF;locus_tag=YE0071
AM286415.1	EMBL	CDS	79834	80898	.	-	0	ID=cds68;Parent=gene72;Dbxref=EnsemblGenomes-Gn:YE0071,EnsemblGenomes-Tr:CAL10213,GOA:A1JHX5,InterPro:IPR002201,InterPro:IPR011910,UniProtKB/TrEMBL:A1JHX5,NCBI_GP:CAL10213.1;Name=CAL10213.1;gbkey=CDS;gene=rfaF;product=ADP-heptose--LPS heptosyltransferase II;protein_id=CAL10213.1;transl_table=11
AM286415.1	EMBL	sequence_feature	79927	80694	.	-	.	ID=id143;Note=Pfam match to entry PF01075 Glyco_transf_9%2CGlycosyltransferase family 9 (heptosyltransferase)%2C score 372.2%2C E-value 3.5e-109;gbkey=misc_feature;gene=rfaF;inference=protein motif:PFAM:PF01075
AM286415.1	EMBL	gene	80929	81861	.	-	.	ID=gene73;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;gene_synonym=htrM;locus_tag=YE0072
AM286415.1	EMBL	CDS	80929	81861	.	-	0	ID=cds69;Parent=gene73;Dbxref=EnsemblGenomes-Gn:YE0072,EnsemblGenomes-Tr:CAL10214,GOA:A1JHX6,InterPro:IPR001509,InterPro:IPR011912,InterPro:IPR016040,NCBI_GP:CAL10214.1;Name=CAL10214.1;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=CAL10214.1;transl_table=11
AM286415.1	EMBL	sequence_feature	80932	81858	.	-	.	ID=id144;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score -1.0%2CE-value 2.2e-13;gbkey=misc_feature;gene=rfaD;inference=protein motif:PFAM:PF01370
AM286415.1	EMBL	gene	82105	83316	.	+	.	ID=gene74;Name=kbl;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=YE0073
AM286415.1	EMBL	CDS	82105	83316	.	+	0	ID=cds70;Parent=gene74;Dbxref=EnsemblGenomes-Gn:YE0073,EnsemblGenomes-Tr:CAL10215,GOA:A1JHX7,InterPro:IPR001917,InterPro:IPR004839,InterPro:IPR011282,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JHX7,NCBI_GP:CAL10215.1;Name=CAL10215.1;gbkey=CDS;gene=kbl;product=2-amino-3-ketobutyrate coenzyme A ligase;protein_id=CAL10215.1;transl_table=11
AM286415.1	EMBL	sequence_feature	82339	83283	.	+	.	ID=id145;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 260.1%2C E-value 1.9e-75;gbkey=misc_feature;gene=kbl;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	82840	82869	.	+	.	ID=id146;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=kbl;inference=protein motif:Prosite:PS00599
AM286415.1	EMBL	gene	83341	84366	.	+	.	ID=gene75;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=YE0074
AM286415.1	EMBL	CDS	83341	84366	.	+	0	ID=cds71;Parent=gene75;Dbxref=EnsemblGenomes-Gn:YE0074,EnsemblGenomes-Tr:CAL10216,GOA:A1JHX8,InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR004627,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR016040,NCBI_GP:CAL10216.1;Name=CAL10216.1;gbkey=CDS;gene=tdh;product=threonine 3-dehydrogenase;protein_id=CAL10216.1;transl_table=11
AM286415.1	EMBL	sequence_feature	83359	84360	.	+	.	ID=id147;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenase%2C score 375.2%2C E-value 4.2e-110;gbkey=misc_feature;gene=tdh;inference=protein motif:PFAM:PF00107
AM286415.1	EMBL	sequence_feature	83524	83568	.	+	.	ID=id148;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=misc_feature;gene=tdh;inference=protein motif:Prosite:PS00059
AM286415.1	EMBL	gene	84557	85582	.	-	.	ID=gene76;Name=YE0075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0075
AM286415.1	EMBL	CDS	84557	85582	.	-	0	ID=cds72;Parent=gene76;Dbxref=EnsemblGenomes-Gn:YE0075,EnsemblGenomes-Tr:CAL10217,GOA:A1JHX9,InterPro:IPR002509,InterPro:IPR006837,InterPro:IPR011330,UniProtKB/TrEMBL:A1JHX9,NCBI_GP:CAL10217.1;Name=CAL10217.1;Note=Similar to Escherichia coli hypothetical protein YibQ SWALL:YIBQ_ECOLI (SWALL:P37691) (319 aa) fasta scores: E(): 4e-63%2C 63.4 38d in 317 aa%2C and to Salmonella typhi putative exported protein STY4089 SWALL:Q8Z2F2 (EMBL:AL627280) (320 aa) fasta scores: E(): 1.3e-64%2C62.46 38d in 325 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37691;product=putative exported protein;protein_id=CAL10217.1;transl_table=11
AM286415.1	EMBL	sequence_feature	84800	84823	.	-	.	ID=id149;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	85606	86760	.	-	.	ID=gene77;Name=YE0076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0076
AM286415.1	EMBL	CDS	85606	86760	.	-	0	ID=cds73;Parent=gene77;Dbxref=EnsemblGenomes-Gn:YE0076,EnsemblGenomes-Tr:CAL10218,InterPro:IPR011055,InterPro:IPR016047,UniProtKB/TrEMBL:A1JHY0,NCBI_GP:CAL10218.1;Name=CAL10218.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10218.1;transl_table=11
AM286415.1	EMBL	sequence_feature	85618	85866	.	-	.	ID=id150;Note=Pfam match to entry PF01551 Peptidase_M37%2CPeptidase family M23/M37%2C score 118.8%2C E-value 6.8e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF01551
AM286415.1	EMBL	gene	86983	88530	.	-	.	ID=gene78;Name=YE0077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0077
AM286415.1	EMBL	CDS	86983	88530	.	-	0	ID=cds74;Parent=gene78;Dbxref=EnsemblGenomes-Gn:YE0077,EnsemblGenomes-Tr:CAL10219,GOA:A1JHY1,InterPro:IPR005995,InterPro:IPR006124,InterPro:IPR011258,InterPro:IPR017849,InterPro:IPR017850,NCBI_GP:CAL10219.1;Name=CAL10219.1;gbkey=CDS;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=CAL10219.1;transl_table=11
AM286415.1	EMBL	sequence_feature	87058	87411	.	-	.	ID=id151;Note=Pfam match to entry PF01676 Metalloenzyme%2CMetalloenzyme superfamily%2C score 186.2%2C E-value 3.5e-53;gbkey=misc_feature;inference=protein motif:PFAM:PF01676
AM286415.1	EMBL	gene	88772	89206	.	+	.	ID=gene79;Name=YE0078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0078
AM286415.1	EMBL	CDS	88772	89206	.	+	0	ID=cds75;Parent=gene79;Dbxref=EnsemblGenomes-Gn:YE0078,EnsemblGenomes-Tr:CAL10220,InterPro:IPR001763,UniProtKB/TrEMBL:A1JHY2,NCBI_GP:CAL10220.1;Name=CAL10220.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10220.1;transl_table=11
AM286415.1	EMBL	sequence_feature	88808	88864	.	+	.	ID=id152;Note=1 probable transmembrane helix predicted for YE0078 by TMHMM2.0 at aa 13-31;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	88895	89179	.	+	.	ID=id153;Note=Pfam match to entry PF00581 Rhodanese%2CRhodanese-like domain%2C score 76.3%2C E-value 4.1e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00581
AM286415.1	EMBL	gene	89256	89504	.	+	.	ID=gene80;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=YE0079
AM286415.1	EMBL	CDS	89256	89504	.	+	0	ID=cds76;Parent=gene80;Dbxref=EnsemblGenomes-Gn:YE0079,EnsemblGenomes-Tr:CAL10221,GOA:A1JHY3,InterPro:IPR002109,InterPro:IPR011767,InterPro:IPR011900,InterPro:IPR012336,InterPro:IPR014025,UniProtKB/TrEMBL:A1JHY3,NCBI_GP:CAL10221.1;Name=CAL10221.1;gbkey=CDS;gene=grxC;product=glutaredoxin;protein_id=CAL10221.1;transl_table=11
AM286415.1	EMBL	sequence_feature	89262	89435	.	+	.	ID=id154;Note=Pfam match to entry PF00462 glutaredoxin%2CGlutaredoxin%2C score 85.5%2C E-value 7.3e-23;gbkey=misc_feature;gene=grxC;inference=protein motif:PFAM:PF00462
AM286415.1	EMBL	sequence_feature	89271	89321	.	+	.	ID=id155;Note=PS00195 Glutaredoxin active site.;gbkey=misc_feature;gene=grxC;inference=protein motif:Prosite:PS00195
AM286415.1	EMBL	gene	89596	90066	.	+	.	ID=gene81;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=YE0080
AM286415.1	EMBL	CDS	89596	90066	.	+	0	ID=cds77;Parent=gene81;Dbxref=EnsemblGenomes-Gn:YE0080,EnsemblGenomes-Tr:CAL10222,GOA:A1JHY4,InterPro:IPR003708,NCBI_GP:CAL10222.1;Name=CAL10222.1;gbkey=CDS;gene=secB;product=protein-export protein;protein_id=CAL10222.1;transl_table=11
AM286415.1	EMBL	sequence_feature	89596	90033	.	+	.	ID=id156;Note=Pfam match to entry PF02556 SecB%2C Preprotein translocase subunit SecB%2C score 338.5%2C E-value 4.8e-99;gbkey=misc_feature;gene=secB;inference=protein motif:PFAM:PF02556
AM286415.1	EMBL	gene	90066	91085	.	+	.	ID=gene82;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=YE0081
AM286415.1	EMBL	CDS	90066	91085	.	+	0	ID=cds78;Parent=gene82;Dbxref=EnsemblGenomes-Gn:YE0081,EnsemblGenomes-Tr:CAL10223,GOA:A1JHY5,InterPro:IPR006109,InterPro:IPR006168,InterPro:IPR008927,InterPro:IPR011128,InterPro:IPR013328,InterPro:IPR016040,NCBI_GP:CAL10223.1;Name=CAL10223.1;gbkey=CDS;gene=gpsA;product=glycerol-3-phosphate dehydrogenase;protein_id=CAL10223.1;transl_table=11
AM286415.1	EMBL	sequence_feature	90078	91046	.	+	.	ID=id157;Note=Pfam match to entry PF01210 NAD_Gly3P_dh%2CNAD-dependent glycerol-3-phosphate dehydrogenase%2C score 543.4%2C E-value 1e-160;gbkey=misc_feature;gene=gpsA;inference=protein motif:PFAM:PF01210
AM286415.1	EMBL	sequence_feature	90639	90704	.	+	.	ID=id158;Note=PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature.;gbkey=misc_feature;gene=gpsA;inference=protein motif:Prosite:PS00957
AM286415.1	EMBL	gene	91211	92032	.	+	.	ID=gene83;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=YE0082
AM286415.1	EMBL	CDS	91211	92032	.	+	0	ID=cds79;Parent=gene83;Dbxref=EnsemblGenomes-Gn:YE0082,EnsemblGenomes-Tr:CAL10224,GOA:A1JHY6,InterPro:IPR001451,InterPro:IPR005881,InterPro:IPR010493,InterPro:IPR011004,InterPro:IPR018357,UniProtKB/TrEMBL:A1JHY6,NCBI_GP:CAL10224.1;Name=CAL10224.1;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=CAL10224.1;transl_table=11
AM286415.1	EMBL	sequence_feature	91613	91666	.	+	.	ID=id159;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 4.6%2CE-value 12;gbkey=misc_feature;gene=cysE;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	91709	91762	.	+	.	ID=id160;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 10.4%2CE-value 2.2;gbkey=misc_feature;gene=cysE;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	91787	91840	.	+	.	ID=id161;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 9.3%2CE-value 3;gbkey=misc_feature;gene=cysE;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	91814	91900	.	+	.	ID=id162;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;gbkey=misc_feature;gene=cysE;inference=protein motif:Prosite:PS00101
AM286415.1	EMBL	sequence_feature	91841	91894	.	+	.	ID=id163;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 11.9%2CE-value 1;gbkey=misc_feature;gene=cysE;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	gene	92213	92716	.	-	.	ID=gene84;Name=YE0083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0083
AM286415.1	EMBL	CDS	92213	92716	.	-	0	ID=cds80;Parent=gene84;Dbxref=EnsemblGenomes-Gn:YE0083,EnsemblGenomes-Tr:CAL10225,GOA:A1JHY7,InterPro:IPR001537,InterPro:IPR016914,InterPro:IPR029026,InterPro:IPR029028,UniProtKB/TrEMBL:A1JHY7,NCBI_GP:CAL10225.1;Name=CAL10225.1;gbkey=CDS;product=putative methyltransferase;protein_id=CAL10225.1;transl_table=11
AM286415.1	EMBL	sequence_feature	92261	92716	.	-	.	ID=id164;Note=Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family%2C score 180.0%2C E-value 2.6e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF00588
AM286415.1	EMBL	gene	92988	93986	.	+	.	ID=gene85;Name=YE0084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0084
AM286415.1	EMBL	CDS	92988	93986	.	+	0	ID=cds81;Parent=gene85;Dbxref=EnsemblGenomes-Gn:YE0084,EnsemblGenomes-Tr:CAL10226,GOA:A1JHY8,InterPro:IPR001497,InterPro:IPR004026,InterPro:IPR008332,InterPro:IPR009057,InterPro:IPR011991,InterPro:IPR014048,InterPro:IPR016221,InterPro:IPR018060,UniProtKB/TrEMBL:A1JHY8,NCBI_GP:CAL10226.1;Name=CAL10226.1;gbkey=CDS;product=bifunctional regulatory protein/DNA repair protein;protein_id=CAL10226.1;transl_table=11
AM286415.1	EMBL	sequence_feature	92991	93122	.	+	.	ID=id165;Note=Pfam match to entry PF02805 Ada_Zn_binding%2C Metal binding domain of Ada%2C score 56.3%2C E-value 4.3e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF02805
AM286415.1	EMBL	sequence_feature	93153	93284	.	+	.	ID=id166;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	93165	93299	.	+	.	ID=id167;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 47.7%2C E-value 1.7e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	93198	93263	.	+	.	ID=id168;Note=Predicted helix-turn-helix motif with score 1245.000%2C SD 3.43 at aa 71-92%2C sequence FTLDALAAELNLSTFHFHRLFK;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	93309	93446	.	+	.	ID=id169;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 15.0%2C E-value 0.062;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	93462	93698	.	+	.	ID=id170;Note=Pfam match to entry PF02870 Methyltransf_1N%2C6-O-methylguanine DNA methyltransferase%2C ribonuclease-like domain%2C score 25.9%2C E-value 6.2e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF02870
AM286415.1	EMBL	sequence_feature	93702	93968	.	+	.	ID=id171;Note=Pfam match to entry PF01035 Methyltransf_1%2C6-O-methylguanine DNA methyltransferase%2C DNA binding domain%2C score 172.2%2C E-value 5.7e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF01035
AM286415.1	EMBL	sequence_feature	93855	93875	.	+	.	ID=id172;Note=PS00374 Methylated-DNA--protein-cysteine methyltransferase active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00374
AM286415.1	EMBL	gene	94056	95432	.	-	.	ID=gene86;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=YE0085
AM286415.1	EMBL	CDS	94056	95432	.	-	0	ID=cds82;Parent=gene86;Dbxref=EnsemblGenomes-Gn:YE0085,EnsemblGenomes-Tr:CAL10227,GOA:A1JHY9,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB/TrEMBL:A1JHY9,NCBI_GP:CAL10227.1;Name=CAL10227.1;gbkey=CDS;gene=cpxA;product=two component sensor kinase;protein_id=CAL10227.1;transl_table=11
AM286415.1	EMBL	sequence_feature	94071	94400	.	-	.	ID=id173;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 133.2%2C E-value 3.1e-37;gbkey=misc_feature;gene=cpxA;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	94533	94721	.	-	.	ID=id174;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 65.3%2C E-value 8.7e-17;gbkey=misc_feature;gene=cpxA;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	94731	94943	.	-	.	ID=id175;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 52.4%2C E-value 6.6e-13;gbkey=misc_feature;gene=cpxA;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	95352	95420	.	-	.	ID=id176;Note=2 probable transmembrane helices predicted for YE0085 by TMHMM2.0 at aa 5-27 and 165-187;gbkey=misc_feature;gene=cpxA;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	94872	94940	.	-	.	ID=id176;Note=2 probable transmembrane helices predicted for YE0085 by TMHMM2.0 at aa 5-27 and 165-187;gbkey=misc_feature;gene=cpxA;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	95429	96127	.	-	.	ID=gene87;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=YE0086
AM286415.1	EMBL	CDS	95429	96127	.	-	0	ID=cds83;Parent=gene87;Dbxref=EnsemblGenomes-Gn:YE0086,EnsemblGenomes-Tr:CAL10228,GOA:A1JHZ0,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB/TrEMBL:A1JHZ0,NCBI_GP:CAL10228.1;Name=CAL10228.1;gbkey=CDS;gene=cpxR;product=two component system response regulatory protein;protein_id=CAL10228.1;transl_table=11
AM286415.1	EMBL	sequence_feature	95453	95671	.	-	.	ID=id177;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 110.2%2C E-value 2.5e-30;gbkey=misc_feature;gene=cpxR;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	sequence_feature	95771	96124	.	-	.	ID=id178;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 152.2%2C E-value 5.9e-43;gbkey=misc_feature;gene=cpxR;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	96348	96812	.	+	.	ID=gene88;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=YE0087
AM286415.1	EMBL	CDS	96348	96812	.	+	0	ID=cds84;Parent=gene88;Dbxref=EnsemblGenomes-Gn:YE0087,EnsemblGenomes-Tr:CAL10229,GOA:A1JHZ1,InterPro:IPR012899,UniProtKB/TrEMBL:A1JHZ1,NCBI_GP:CAL10229.1;Name=CAL10229.1;gbkey=CDS;gene=cpxP;product=putative exported protein;protein_id=CAL10229.1;transl_table=11
AM286415.1	EMBL	gene	96944	97846	.	+	.	ID=gene89;Name=YE0088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0088
AM286415.1	EMBL	CDS	96944	97846	.	+	0	ID=cds85;Parent=gene89;Dbxref=EnsemblGenomes-Gn:YE0088,EnsemblGenomes-Tr:CAL10230,GOA:A1JHZ2,InterPro:IPR002524,InterPro:IPR023783,InterPro:IPR027469,InterPro:IPR027470,NCBI_GP:CAL10230.1;Name=CAL10230.1;gbkey=CDS;product=putative integral membrane protein;protein_id=CAL10230.1;transl_table=11
AM286415.1	EMBL	sequence_feature	96977	97045	.	+	.	ID=id179;Note=6 probable transmembrane helices predicted for YE0088 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 117-139%2C158-175 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	97055	97123	.	+	.	ID=id179;Note=6 probable transmembrane helices predicted for YE0088 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 117-139%2C158-175 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	97181	97249	.	+	.	ID=id179;Note=6 probable transmembrane helices predicted for YE0088 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 117-139%2C158-175 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	97292	97360	.	+	.	ID=id179;Note=6 probable transmembrane helices predicted for YE0088 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 117-139%2C158-175 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	97415	97468	.	+	.	ID=id179;Note=6 probable transmembrane helices predicted for YE0088 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 117-139%2C158-175 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	97481	97540	.	+	.	ID=id179;Note=6 probable transmembrane helices predicted for YE0088 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 117-139%2C158-175 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	96980	97816	.	+	.	ID=id180;Note=Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family%2C score 354.0%2C E-value 1e-103;gbkey=misc_feature;inference=protein motif:PFAM:PF01545
AM286415.1	EMBL	gene	98096	99091	.	+	.	ID=gene90;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=YE0089
AM286415.1	EMBL	CDS	98096	99091	.	+	0	ID=cds86;Parent=gene90;Dbxref=EnsemblGenomes-Gn:YE0089,EnsemblGenomes-Tr:CAL10231,GOA:A1JHZ3,InterPro:IPR000023,InterPro:IPR012003,InterPro:IPR012828,InterPro:IPR015912,InterPro:IPR022953,NCBI_GP:CAL10231.1;Name=CAL10231.1;gbkey=CDS;gene=pfkA;product=6-phosphofructokinase;protein_id=CAL10231.1;transl_table=11
AM286415.1	EMBL	sequence_feature	98102	98932	.	+	.	ID=id181;Note=Pfam match to entry PF00365 PFK%2CPhosphofructokinase%2C score 607.0%2C E-value 7.1e-180;gbkey=misc_feature;gene=pfkA;inference=protein motif:PFAM:PF00365
AM286415.1	EMBL	sequence_feature	98627	98659	.	+	.	ID=id182;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pfkA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	98828	98884	.	+	.	ID=id183;Note=PS00433 Phosphofructokinase signature.;gbkey=misc_feature;gene=pfkA;inference=protein motif:Prosite:PS00433
AM286415.1	EMBL	repeat_region	99130	100556	.	-	.	ID=id184;Note=IS4-like insertion sequence element IS1660;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	99130	99145	.	+	.	ID=id185;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	stem_loop	99131	99162	.	-	.	ID=id186;gbkey=stem_loop
AM286415.1	EMBL	gene	99139	100473	.	-	.	ID=gene91;Name=YE0090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0090
AM286415.1	EMBL	CDS	99139	100473	.	-	0	ID=cds87;Parent=gene91;Dbxref=EnsemblGenomes-Gn:YE0090,EnsemblGenomes-Tr:CAL10232,GOA:A1JHZ4,InterPro:IPR002559,InterPro:IPR012337,InterPro:IPR024473,UniProtKB/TrEMBL:A1JHZ4,NCBI_GP:CAL10232.1;Name=CAL10232.1;Note=Highly similar to many transposases from the IS element IS4 including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 9.8e-166%2C89.54 38d in 440 aa and to Pantoea agglomerans insertion element protein SWALL:P71168 (EMBL:X81894) (440 aa) fasta scores: E(): 1.7e-86%2C 52.42 38d in 433 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1660;protein_id=CAL10232.1;transl_table=11
AM286415.1	EMBL	sequence_feature	99418	100095	.	-	.	ID=id187;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 160.8%2C E-value 1.5e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	INVERTED	100541	100556	.	-	.	ID=id188;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	100712	101701	.	+	.	ID=gene92;Name=sbp1;gbkey=Gene;gene=sbp1;gene_biotype=protein_coding;locus_tag=YE0091
AM286415.1	EMBL	CDS	100712	101701	.	+	0	ID=cds88;Parent=gene92;Dbxref=EnsemblGenomes-Gn:YE0091,EnsemblGenomes-Tr:CAL10233,GOA:A1JHZ5,InterPro:IPR000957,InterPro:IPR005669,UniProtKB/TrEMBL:A1JHZ5,NCBI_GP:CAL10233.1;Name=CAL10233.1;gbkey=CDS;gene=sbp1;product=exported sulfate-binding protein;protein_id=CAL10233.1;transl_table=11
AM286415.1	EMBL	sequence_feature	100712	101698	.	+	.	ID=id189;Note=Pfam match to entry PF01100 Sulphate_bind%2CProkaryotic sulphate- and thiosulphate-binding protein %2Cscore 761.1%2C E-value 2.9e-226;gbkey=misc_feature;gene=sbp1;inference=protein motif:PFAM:PF01100
AM286415.1	EMBL	sequence_feature	101144	101170	.	+	.	ID=id190;Note=PS00757 Prokaryotic sulfate-binding proteins signature 2.;gbkey=misc_feature;gene=sbp1;inference=protein motif:Prosite:PS00757
AM286415.1	EMBL	gene	101902	102093	.	+	.	ID=gene93;Name=YE0092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0092
AM286415.1	EMBL	CDS	101902	102093	.	+	0	ID=cds89;Parent=gene93;Dbxref=EnsemblGenomes-Gn:YE0092,EnsemblGenomes-Tr:CAL10234,UniProtKB/TrEMBL:A1JHZ6,NCBI_GP:CAL10234.1;Name=CAL10234.1;Note=Poor database matches. Weakly similar to the N-terminal region of Agrobacterium tumefaciens hypothetical protein AttU SWALL:Q9WWC8 (EMBL:U59485) (78 aa) fasta scores: E(): 9.2%2C 32.55 38d in 43 aa. Doubtful CDS;gbkey=CDS;inference=similar to sequence:INSDC:U59485;product=hypothetical protein;protein_id=CAL10234.1;transl_table=11
AM286415.1	EMBL	gene	102318	103085	.	-	.	ID=gene94;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;gene_synonym=tpi;locus_tag=YE0093
AM286415.1	EMBL	CDS	102318	103085	.	-	0	ID=cds90;Parent=gene94;Dbxref=EnsemblGenomes-Gn:YE0093,EnsemblGenomes-Tr:CAL10235,GOA:A1JHZ7,InterPro:IPR000652,InterPro:IPR013785,InterPro:IPR020861,InterPro:IPR022896,NCBI_GP:CAL10235.1;Name=CAL10235.1;gbkey=CDS;gene=tpiA;product=triosephosphate isomerase;protein_id=CAL10235.1;transl_table=11
AM286415.1	EMBL	sequence_feature	102330	103082	.	-	.	ID=id191;Note=Pfam match to entry PF00121 TIM%2C Triosephosphate isomerase%2C score 523.6%2C E-value 9.4e-155;gbkey=misc_feature;gene=tpiA;inference=protein motif:PFAM:PF00121
AM286415.1	EMBL	sequence_feature	102561	102593	.	-	.	ID=id192;Note=PS00171 Triosephosphate isomerase active site.;gbkey=misc_feature;gene=tpiA;inference=protein motif:Prosite:PS00171
AM286415.1	EMBL	gene	103214	103798	.	-	.	ID=gene95;Name=YE0094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0094
AM286415.1	EMBL	CDS	103214	103798	.	-	0	ID=cds91;Parent=gene95;Dbxref=EnsemblGenomes-Gn:YE0094,EnsemblGenomes-Tr:CAL10236,InterPro:IPR009918,UniProtKB/TrEMBL:A1JHZ8,NCBI_GP:CAL10236.1;Name=CAL10236.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10236.1;transl_table=11
AM286415.1	EMBL	gene	104103	104537	.	+	.	ID=gene96;Name=YE0095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0095
AM286415.1	EMBL	CDS	104103	104537	.	+	0	ID=cds92;Parent=gene96;Dbxref=EnsemblGenomes-Gn:YE0095,EnsemblGenomes-Tr:CAL10237,GOA:A1JHZ9,InterPro:IPR008523,UniProtKB/TrEMBL:A1JHZ9,NCBI_GP:CAL10237.1;Name=CAL10237.1;gbkey=CDS;product=conserved membrane protein;protein_id=CAL10237.1;transl_table=11
AM286415.1	EMBL	sequence_feature	104160	104213	.	+	.	ID=id193;Note=4 probable transmembrane helices predicted for YE0095 by TMHMM2.0 at aa 20-37%2C 41-63%2C 72-94 and 99-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	104223	104291	.	+	.	ID=id193;Note=4 probable transmembrane helices predicted for YE0095 by TMHMM2.0 at aa 20-37%2C 41-63%2C 72-94 and 99-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	104316	104384	.	+	.	ID=id193;Note=4 probable transmembrane helices predicted for YE0095 by TMHMM2.0 at aa 20-37%2C 41-63%2C 72-94 and 99-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	104397	104465	.	+	.	ID=id193;Note=4 probable transmembrane helices predicted for YE0095 by TMHMM2.0 at aa 20-37%2C 41-63%2C 72-94 and 99-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	104780	105526	.	-	.	ID=gene97;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;gene_synonym=mvrA;locus_tag=YE0096
AM286415.1	EMBL	CDS	104780	105526	.	-	0	ID=cds93;Parent=gene97;Dbxref=EnsemblGenomes-Gn:YE0096,EnsemblGenomes-Tr:CAL10238,GOA:A1JI00,InterPro:IPR001433,InterPro:IPR008333,InterPro:IPR017927,InterPro:IPR017938,UniProtKB/TrEMBL:A1JI00,NCBI_GP:CAL10238.1;Name=CAL10238.1;gbkey=CDS;gene=fpr;product=ferredoxin--NADP reductase;protein_id=CAL10238.1;transl_table=11
AM286415.1	EMBL	sequence_feature	104855	105211	.	-	.	ID=id194;Note=Pfam match to entry PF00175 NAD_binding_1%2COxidoreductase NAD-binding domain%2C score 82.4%2C E-value 6.1e-22;gbkey=misc_feature;gene=fpr;inference=protein motif:PFAM:PF00175
AM286415.1	EMBL	sequence_feature	105227	105511	.	-	.	ID=id195;Note=Pfam match to entry PF00970 FAD_binding_6%2COxidoreductase FAD-binding domain%2C score 25.6%2C E-value 3.3e-06;gbkey=misc_feature;gene=fpr;inference=protein motif:PFAM:PF00970
AM286415.1	EMBL	gene	105845	107029	.	+	.	ID=gene98;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=YE0097
AM286415.1	EMBL	CDS	105845	107029	.	+	0	ID=cds94;Parent=gene98;Dbxref=EnsemblGenomes-Gn:YE0097,EnsemblGenomes-Tr:CAL10239,GOA:A1JI01,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JI01,NCBI_GP:CAL10239.1;Name=CAL10239.1;Note=Similar to Escherichia coli multidrug resistance protein D EmrD SWALL:EMRD_ECOLI (SWALL:P31442) (394 aa) fasta scores: E(): 6.1e-104%2C 71.28 38d in 390 aa%2C and to Salmonella typhi multidrug resistance protein D STY3981 SWALL:Q8Z2L0 (EMBL:AL627280) (394 aa) fasta scores: E(): 2.3e-106%2C 72.33 38d in 394 aa;gbkey=CDS;gene=emrD;inference=similar to sequence:UniProtKB:P31442;product=multidrug resistance protein D;protein_id=CAL10239.1;transl_table=11
AM286415.1	EMBL	sequence_feature	105881	107017	.	+	.	ID=id196;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -92.8%2C E-value 0.00014;gbkey=misc_feature;gene=emrD;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	105986	106045	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	106064	106123	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	106136	106195	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	106253	106321	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	106334	106393	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	106451	106519	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	106562	106630	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	106667	106735	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	106745	106813	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	106832	106900	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	106928	106996	.	+	.	ID=id197;Note=12 probable transmembrane helices predicted for YE0097 by TMHMM2.0 at aa 7-28%2C 48-67%2C 74-93%2C 98-117%2C137-159%2C 164-183%2C 203-225%2C 240-262%2C 275-297%2C 301-323%2C330-352 and 362-384;gbkey=misc_feature;gene=emrD;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	107115	108125	.	-	.	ID=gene99;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=YE0098
AM286415.1	EMBL	CDS	107115	108125	.	-	0	ID=cds95;Parent=gene99;Dbxref=EnsemblGenomes-Gn:YE0098,EnsemblGenomes-Tr:CAL10240,GOA:A1JI02,InterPro:IPR004464,UniProtKB/TrEMBL:A1JI02,NCBI_GP:CAL10240.1;Name=CAL10240.1;Note=Similar to Escherichia coli putative fructose 1%2C6-bisphosphatase GlpX SWALL:GLPX_ECOLI (SWALL:P28860) (336 aa) fasta scores: E(): 6.2e-107%2C 86.01 38d in 336 aa%2C and to Shigella flexneri putative fructose 1%2C 6-bisphosphatase GlpX SWALL:GLPX_SHIFL (SWALL:P28900) (336 aa) fasta scores: E(): 2.2e-106%2C 85.71 38d in 336 aa;gbkey=CDS;gene=glpX;inference=similar to sequence:UniProtKB:P28900;product=putative fructose 1%2C 6-bisphosphatase;protein_id=CAL10240.1;transl_table=11
AM286415.1	EMBL	sequence_feature	107160	108122	.	-	.	ID=id198;Note=Pfam match to entry PF03320 FBPase_glpX%2C Bacterial fructose-1%2C6-bisphosphatase%2C glpX-encoded%2C score 788.7%2CE-value 1.4e-234;gbkey=misc_feature;gene=glpX;inference=protein motif:PFAM:PF03320
AM286415.1	EMBL	gene	108307	109830	.	-	.	ID=gene100;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=YE0099
AM286415.1	EMBL	CDS	108307	109830	.	-	0	ID=cds96;Parent=gene100;Dbxref=EnsemblGenomes-Gn:YE0099,EnsemblGenomes-Tr:CAL10241,GOA:A1JI03,InterPro:IPR005999,InterPro:IPR018483,InterPro:IPR018484,InterPro:IPR018485,UniProtKB/TrEMBL:A1JI03,NCBI_GP:CAL10241.1;Name=CAL10241.1;Note=Similar to Escherichia coli glycerol kinase GlpK SWALL:GLPK_ECOLI (SWALL:P08859) (501 aa) fasta scores: E(): 2e-178%2C 85.23 38d in 501 aa%2C and to Salmonella typhi glycerol kinase STY3784 SWALL:Q8Z2Y6 (EMBL:AL627279) (501 aa) fasta scores: E(): 1.6e-177%2C 85.17 38d in 499 aa;gbkey=CDS;gene=glpK;inference=similar to sequence:UniProtKB:P08859;product=glycerol kinase;protein_id=CAL10241.1;transl_table=11
AM286415.1	EMBL	sequence_feature	108373	109050	.	-	.	ID=id199;Note=Pfam match to entry PF02782 FGGY_C%2C FGGY family of carbohydrate kinases%2C C-terminal domain%2C score 353.3%2CE-value 1.7e-103;gbkey=misc_feature;gene=glpK;inference=protein motif:PFAM:PF02782
AM286415.1	EMBL	sequence_feature	108667	108729	.	-	.	ID=id200;Note=PS00445 FGGY family of carbohydrate kinases signature 2.;gbkey=misc_feature;gene=glpK;inference=protein motif:Prosite:PS00445
AM286415.1	EMBL	sequence_feature	109057	109800	.	-	.	ID=id201;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C N-terminal domain%2C score 452.8%2CE-value 1.9e-133;gbkey=misc_feature;gene=glpK;inference=protein motif:PFAM:PF00370
AM286415.1	EMBL	sequence_feature	109372	109410	.	-	.	ID=id202;Note=PS00933 FGGY family of carbohydrate kinases signature 1.;gbkey=misc_feature;gene=glpK;inference=protein motif:Prosite:PS00933
AM286415.1	EMBL	gene	109907	110755	.	-	.	ID=gene101;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=YE0100
AM286415.1	EMBL	CDS	109907	110755	.	-	0	ID=cds97;Parent=gene101;Dbxref=EnsemblGenomes-Gn:YE0100,EnsemblGenomes-Tr:CAL10242,GOA:A1JI04,InterPro:IPR000425,InterPro:IPR022357,InterPro:IPR023271,UniProtKB/TrEMBL:A1JI04,NCBI_GP:CAL10242.1;Name=CAL10242.1;gbkey=CDS;gene=glpF;product=glycerol uptake facilitator protein;protein_id=CAL10242.1;transl_table=11
AM286415.1	EMBL	sequence_feature	110660	110719	.	-	.	ID=id203;Note=6 probable transmembrane helices predicted for YE0100 by TMHMM2.0 at aa 13-32%2C 47-69%2C 89-111%2C 145-167%2C180-202 and 235-257;gbkey=misc_feature;gene=glpF;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	110549	110617	.	-	.	ID=id203;Note=6 probable transmembrane helices predicted for YE0100 by TMHMM2.0 at aa 13-32%2C 47-69%2C 89-111%2C 145-167%2C180-202 and 235-257;gbkey=misc_feature;gene=glpF;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	110423	110491	.	-	.	ID=id203;Note=6 probable transmembrane helices predicted for YE0100 by TMHMM2.0 at aa 13-32%2C 47-69%2C 89-111%2C 145-167%2C180-202 and 235-257;gbkey=misc_feature;gene=glpF;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	110255	110323	.	-	.	ID=id203;Note=6 probable transmembrane helices predicted for YE0100 by TMHMM2.0 at aa 13-32%2C 47-69%2C 89-111%2C 145-167%2C180-202 and 235-257;gbkey=misc_feature;gene=glpF;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	110150	110218	.	-	.	ID=id203;Note=6 probable transmembrane helices predicted for YE0100 by TMHMM2.0 at aa 13-32%2C 47-69%2C 89-111%2C 145-167%2C180-202 and 235-257;gbkey=misc_feature;gene=glpF;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	109985	110053	.	-	.	ID=id203;Note=6 probable transmembrane helices predicted for YE0100 by TMHMM2.0 at aa 13-32%2C 47-69%2C 89-111%2C 145-167%2C180-202 and 235-257;gbkey=misc_feature;gene=glpF;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	109997	110755	.	-	.	ID=id204;Note=Pfam match to entry PF00230 MIP%2C Major intrinsic protein%2C score 420.9%2C E-value 7.8e-124;gbkey=misc_feature;gene=glpF;inference=protein motif:PFAM:PF00230
AM286415.1	EMBL	sequence_feature	110510	110542	.	-	.	ID=id205;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=glpF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	110528	110554	.	-	.	ID=id206;Note=PS00221 MIP family signature.;gbkey=misc_feature;gene=glpF;inference=protein motif:Prosite:PS00221
AM286415.1	EMBL	sequence_feature	110666	110698	.	-	.	ID=id207;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=glpF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	111350	111589	.	+	.	ID=gene102;Name=YE0101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0101
AM286415.1	EMBL	CDS	111350	111589	.	+	0	ID=cds98;Parent=gene102;Dbxref=EnsemblGenomes-Gn:YE0101,EnsemblGenomes-Tr:CAL10243,GOA:A1JI05,InterPro:IPR009252,NCBI_GP:CAL10243.1;Name=CAL10243.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10243.1;transl_table=11
AM286415.1	EMBL	gene	111726	112211	.	-	.	ID=gene103;Name=menG;gbkey=Gene;gene=menG;gene_biotype=protein_coding;locus_tag=YE0102
AM286415.1	EMBL	CDS	111726	112211	.	-	0	ID=cds99;Parent=gene103;Dbxref=EnsemblGenomes-Gn:YE0102,EnsemblGenomes-Tr:CAL10244,GOA:A1JI06,InterPro:IPR005493,InterPro:IPR010203,InterPro:IPR014339,NCBI_GP:CAL10244.1;Name=CAL10244.1;gbkey=CDS;gene=menG;product=S-adenosylmethionine:2-demethylmenaquinone methyltransferase;protein_id=CAL10244.1;transl_table=11
AM286415.1	EMBL	sequence_feature	111753	112211	.	-	.	ID=id208;Note=Pfam match to entry PF03737 Methyltransf_6%2CDimethylmenaquinone methyltransferase%2C score 262.7%2CE-value 3.2e-76;gbkey=misc_feature;gene=menG;inference=protein motif:PFAM:PF03737
AM286415.1	EMBL	gene	112342	113196	.	-	.	ID=gene104;Name=menA;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=YE0103
AM286415.1	EMBL	CDS	112342	113196	.	-	0	ID=cds100;Parent=gene104;Dbxref=EnsemblGenomes-Gn:YE0103,EnsemblGenomes-Tr:CAL10245,GOA:A1JI07,InterPro:IPR000537,InterPro:IPR004657,InterPro:IPR026046,UniProtKB/TrEMBL:A1JI07,NCBI_GP:CAL10245.1;Name=CAL10245.1;gbkey=CDS;gene=menA;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=CAL10245.1;transl_table=11
AM286415.1	EMBL	sequence_feature	112345	113196	.	-	.	ID=id209;Note=Pfam match to entry PF01040 UbiA%2C UbiA prenyltransferase family%2C score 121.0%2C E-value 1.5e-33;gbkey=misc_feature;gene=menA;inference=protein motif:PFAM:PF01040
AM286415.1	EMBL	sequence_feature	113068	113127	.	-	.	ID=id210;Note=8 probable transmembrane helices predicted for YE0103 by TMHMM2.0 at aa 24-43%2C 77-99%2C 104-123%2C 136-155%2C160-182%2C 203-225%2C 230-249 and 261-283;gbkey=misc_feature;gene=menA;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	112900	112968	.	-	.	ID=id210;Note=8 probable transmembrane helices predicted for YE0103 by TMHMM2.0 at aa 24-43%2C 77-99%2C 104-123%2C 136-155%2C160-182%2C 203-225%2C 230-249 and 261-283;gbkey=misc_feature;gene=menA;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	112828	112887	.	-	.	ID=id210;Note=8 probable transmembrane helices predicted for YE0103 by TMHMM2.0 at aa 24-43%2C 77-99%2C 104-123%2C 136-155%2C160-182%2C 203-225%2C 230-249 and 261-283;gbkey=misc_feature;gene=menA;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	112732	112791	.	-	.	ID=id210;Note=8 probable transmembrane helices predicted for YE0103 by TMHMM2.0 at aa 24-43%2C 77-99%2C 104-123%2C 136-155%2C160-182%2C 203-225%2C 230-249 and 261-283;gbkey=misc_feature;gene=menA;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	112651	112719	.	-	.	ID=id210;Note=8 probable transmembrane helices predicted for YE0103 by TMHMM2.0 at aa 24-43%2C 77-99%2C 104-123%2C 136-155%2C160-182%2C 203-225%2C 230-249 and 261-283;gbkey=misc_feature;gene=menA;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	112522	112590	.	-	.	ID=id210;Note=8 probable transmembrane helices predicted for YE0103 by TMHMM2.0 at aa 24-43%2C 77-99%2C 104-123%2C 136-155%2C160-182%2C 203-225%2C 230-249 and 261-283;gbkey=misc_feature;gene=menA;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	112450	112509	.	-	.	ID=id210;Note=8 probable transmembrane helices predicted for YE0103 by TMHMM2.0 at aa 24-43%2C 77-99%2C 104-123%2C 136-155%2C160-182%2C 203-225%2C 230-249 and 261-283;gbkey=misc_feature;gene=menA;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	112348	112416	.	-	.	ID=id210;Note=8 probable transmembrane helices predicted for YE0103 by TMHMM2.0 at aa 24-43%2C 77-99%2C 104-123%2C 136-155%2C160-182%2C 203-225%2C 230-249 and 261-283;gbkey=misc_feature;gene=menA;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	112903	112935	.	-	.	ID=id211;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=menA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	113424	114755	.	-	.	ID=gene105;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=YE0104
AM286415.1	EMBL	CDS	113424	114755	.	-	0	ID=cds101;Parent=gene105;Dbxref=EnsemblGenomes-Gn:YE0104,EnsemblGenomes-Tr:CAL10246,GOA:A1JI08,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004491,InterPro:IPR019489,InterPro:IPR027417,NCBI_GP:CAL10246.1;Name=CAL10246.1;gbkey=CDS;gene=hslU;product=ATP-binding heat shock protein;protein_id=CAL10246.1;transl_table=11
AM286415.1	EMBL	sequence_feature	113607	114602	.	-	.	ID=id212;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 27.3%2C E-value 5.6e-07;gbkey=misc_feature;gene=hslU;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	114564	114587	.	-	.	ID=id213;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=hslU;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	114810	115334	.	-	.	ID=gene106;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=YE0105
AM286415.1	EMBL	CDS	114810	115334	.	-	0	ID=cds102;Parent=gene106;Dbxref=EnsemblGenomes-Gn:YE0105,EnsemblGenomes-Tr:CAL10247,GOA:A1JI09,InterPro:IPR001353,InterPro:IPR022281,InterPro:IPR023333,InterPro:IPR029055,NCBI_GP:CAL10247.1;Name=CAL10247.1;gbkey=CDS;gene=hslV;product=heat shock protein;protein_id=CAL10247.1;transl_table=11
AM286415.1	EMBL	sequence_feature	115164	115223	.	-	.	ID=id214;Note=1 probable transmembrane helix predicted for YE0105 by TMHMM2.0 at aa 38-57;gbkey=misc_feature;gene=hslV;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	115434	116297	.	-	.	ID=gene107;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;gene_synonym=msgA;locus_tag=YE0106
AM286415.1	EMBL	CDS	115434	116297	.	-	0	ID=cds103;Parent=gene107;Dbxref=EnsemblGenomes-Gn:YE0106,EnsemblGenomes-Tr:CAL10248,GOA:A1JI10,InterPro:IPR007730,InterPro:IPR011930,UniProtKB/TrEMBL:A1JI10,NCBI_GP:CAL10248.1;Name=CAL10248.1;gbkey=CDS;gene=ftsN;product=cell division protein;protein_id=CAL10248.1;transl_table=11
AM286415.1	EMBL	sequence_feature	116145	116213	.	-	.	ID=id215;Note=1 probable transmembrane helix predicted for YE0106 by TMHMM2.0 at aa 29-51;gbkey=misc_feature;gene=ftsN;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	116363	117391	.	-	.	ID=gene108;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=YE0107
AM286415.1	EMBL	CDS	116363	117391	.	-	0	ID=cds104;Parent=gene108;Dbxref=EnsemblGenomes-Gn:YE0107,EnsemblGenomes-Tr:CAL10249,GOA:A1JI11,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JI11,NCBI_GP:CAL10249.1;Name=CAL10249.1;gbkey=CDS;gene=cytR;product=transcriptional repressor;protein_id=CAL10249.1;transl_table=11
AM286415.1	EMBL	sequence_feature	116387	117193	.	-	.	ID=id216;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 116.6%2C E-value 3.1e-32;gbkey=misc_feature;gene=cytR;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	sequence_feature	117287	117370	.	-	.	ID=id217;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 53.4%2C E-value 3.2e-13;gbkey=misc_feature;gene=cytR;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	117299	117364	.	-	.	ID=id218;Note=Predicted helix-turn-helix motif with score 1874.000%2C SD 5.57 at aa 10-31%2C sequence ATMKDVAEMAGVSTATVSRALM;gbkey=misc_feature;gene=cytR
AM286415.1	EMBL	sequence_feature	117302	117358	.	-	.	ID=id219;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=cytR;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	gene	117622	119820	.	-	.	ID=gene109;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=YE0108
AM286415.1	EMBL	CDS	117622	119820	.	-	0	ID=cds105;Parent=gene109;Dbxref=EnsemblGenomes-Gn:YE0108,EnsemblGenomes-Tr:CAL10250,GOA:A1JI12,InterPro:IPR001650,InterPro:IPR005259,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR027417,UniProtKB/TrEMBL:A1JI12,NCBI_GP:CAL10250.1;Name=CAL10250.1;gbkey=CDS;gene=priA;product=primosomal protein n';protein_id=CAL10250.1;transl_table=11
AM286415.1	EMBL	sequence_feature	118054	118311	.	-	.	ID=id220;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 27.9%2C E-value 1.6e-05;gbkey=misc_feature;gene=priA;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	119128	119151	.	-	.	ID=id221;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=priA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	120213	120431	.	+	.	ID=gene110;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=YE0109
AM286415.1	EMBL	CDS	120213	120431	.	+	0	ID=cds106;Parent=gene110;Dbxref=EnsemblGenomes-Gn:YE0109,EnsemblGenomes-Tr:CAL10251,GOA:A1JI13,InterPro:IPR002150,InterPro:IPR027491,NCBI_GP:CAL10251.1;Name=CAL10251.1;gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=CAL10251.1;transl_table=11
AM286415.1	EMBL	sequence_feature	120213	120413	.	+	.	ID=id222;Note=Pfam match to entry PF01197 Ribosomal_L31%2CRibosomal protein L31%2C score 144.6%2C E-value 1.1e-40;gbkey=misc_feature;gene=rpmE;inference=protein motif:PFAM:PF01197
AM286415.1	EMBL	sequence_feature	120321	120338	.	+	.	ID=id223;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=rpmE;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	120333	120389	.	+	.	ID=id224;Note=PS01143 Ribosomal protein L31 signature.;gbkey=misc_feature;gene=rpmE;inference=protein motif:Prosite:PS01143
AM286415.1	EMBL	gene	120521	120838	.	-	.	ID=gene111;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=YE0110
AM286415.1	EMBL	CDS	120521	120838	.	-	0	ID=cds107;Parent=gene111;Dbxref=EnsemblGenomes-Gn:YE0110,EnsemblGenomes-Tr:CAL10252,GOA:A1JI14,InterPro:IPR002084,InterPro:IPR010985,InterPro:IPR023453,NCBI_GP:CAL10252.1;Name=CAL10252.1;gbkey=CDS;gene=metJ;product=transcriptional repressor protein;protein_id=CAL10252.1;transl_table=11
AM286415.1	EMBL	sequence_feature	120524	120835	.	-	.	ID=id225;Note=Pfam match to entry PF01340 MetJ%2C Met Apo-repressor%2C MetJ%2C score 292.2%2C E-value 4.2e-85;gbkey=misc_feature;gene=metJ;inference=protein motif:PFAM:PF01340
AM286415.1	EMBL	gene	121214	122371	.	+	.	ID=gene112;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=YE0111
AM286415.1	EMBL	CDS	121214	122371	.	+	0	ID=cds108;Parent=gene112;Dbxref=EnsemblGenomes-Gn:YE0111,EnsemblGenomes-Tr:CAL10253,GOA:A1JI15,InterPro:IPR000277,InterPro:IPR011821,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JI15,NCBI_GP:CAL10253.1;Name=CAL10253.1;gbkey=CDS;gene=metB;product=cystathionine gamma-synthase;protein_id=CAL10253.1;transl_table=11
AM286415.1	EMBL	sequence_feature	121229	122356	.	+	.	ID=id226;Note=Pfam match to entry PF01053 Cys_Met_Meta_PP%2CCys/Met metabolism PLP-dependent enzyme%2C score 708.0%2CE-value 2.9e-210;gbkey=misc_feature;gene=metB;inference=protein motif:PFAM:PF01053
AM286415.1	EMBL	sequence_feature	121781	121825	.	+	.	ID=id227;Note=PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=metB;inference=protein motif:Prosite:PS00868
AM286415.1	EMBL	gene	122379	124814	.	+	.	ID=gene113;Name=metL;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=YE0112
AM286415.1	EMBL	CDS	122379	124814	.	+	0	ID=cds109;Parent=gene113;Dbxref=EnsemblGenomes-Gn:YE0112,EnsemblGenomes-Tr:CAL10254,GOA:A1JI16,InterPro:IPR001048,InterPro:IPR001341,InterPro:IPR001342,InterPro:IPR005106,InterPro:IPR011147,InterPro:IPR016040,InterPro:IPR018042,InterPro:IPR019811,UniProtKB/TrEMBL:A1JI16,NCBI_GP:CAL10254.1;Name=CAL10254.1;gbkey=CDS;gene=metL;product=bifunctional aspartokinase/homoserine dehydrogenase II;protein_id=CAL10254.1;transl_table=11
AM286415.1	EMBL	sequence_feature	122412	123242	.	+	.	ID=id228;Note=Pfam match to entry PF00696 aakinase%2C Amino acid kinase family%2C score 162.5%2C E-value 4.7e-46;gbkey=misc_feature;gene=metL;inference=protein motif:PFAM:PF00696
AM286415.1	EMBL	sequence_feature	122421	122447	.	+	.	ID=id229;Note=PS00324 Aspartokinase signature.;gbkey=misc_feature;gene=metL;inference=protein motif:Prosite:PS00324
AM286415.1	EMBL	sequence_feature	123795	124199	.	+	.	ID=id230;Note=Pfam match to entry PF03447 NAD_binding_3%2CHomoserine dehydrogenase%2C NAD binding domain%2C score 167.0%2C E-value 2.1e-47;gbkey=misc_feature;gene=metL;inference=protein motif:PFAM:PF03447
AM286415.1	EMBL	sequence_feature	124203	124793	.	+	.	ID=id231;Note=Pfam match to entry PF00742 Homoserine_dh%2CHomoserine dehydrogenase%2C score 344.9%2C E-value 5.8e-101;gbkey=misc_feature;gene=metL;inference=protein motif:PFAM:PF00742
AM286415.1	EMBL	sequence_feature	124341	124409	.	+	.	ID=id232;Note=PS01042 Homoserine dehydrogenase signature.;gbkey=misc_feature;gene=metL;inference=protein motif:Prosite:PS01042
AM286415.1	EMBL	gene	124892	127000	.	-	.	ID=gene114;Name=YE0113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0113
AM286415.1	EMBL	CDS	124892	127000	.	-	0	ID=cds110;Parent=gene114;Dbxref=EnsemblGenomes-Gn:YE0113,EnsemblGenomes-Tr:CAL10255,UniProtKB/TrEMBL:A1JI17,NCBI_GP:CAL10255.1;Name=CAL10255.1;Note=Similar to several including: Clostridium acetobutylicum predicted permease Cac2003 SWALL:Q97HK8 (EMBL:AE007704) (832 aa) fasta scores: E(): 0.072%2C 24.67 id in 535 aa and Buchnera aphidicola OmpA-like protein precursor or bu332 SWALL:OMPA_BUCAI (SWALL:P57414) (349 aa) fasta scores: E(): 6.6%2C 24.17 38d in 273 aa. Note that this CDS lies within a localised low G+C region.;gbkey=CDS;inference=similar to sequence:UniProtKB:P57414;product=hypothetical protein;protein_id=CAL10255.1;transl_table=11
AM286415.1	EMBL	gene	127374	128258	.	+	.	ID=gene115;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=YE0114
AM286415.1	EMBL	CDS	127374	128258	.	+	0	ID=cds111;Parent=gene115;Dbxref=EnsemblGenomes-Gn:YE0114,EnsemblGenomes-Tr:CAL10256,GOA:A1JI18,InterPro:IPR003171,InterPro:IPR004620,InterPro:IPR029041,UniProtKB/TrEMBL:A1JI18,NCBI_GP:CAL10256.1;Name=CAL10256.1;gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=CAL10256.1;transl_table=11
AM286415.1	EMBL	sequence_feature	127404	128246	.	+	.	ID=id233;Note=Pfam match to entry PF02219 MTHFR%2CMethylenetetrahydrofolate reductase%2C score 555.3%2C E-value 2.6e-164;gbkey=misc_feature;gene=metF;inference=protein motif:PFAM:PF02219
AM286415.1	EMBL	gene	128578	129780	.	+	.	ID=gene116;Name=YE0115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0115
AM286415.1	EMBL	CDS	128578	129780	.	+	0	ID=cds112;Parent=gene116;Dbxref=EnsemblGenomes-Gn:YE0115,EnsemblGenomes-Tr:CAL10257,GOA:A1JI19,InterPro:IPR000768,UniProtKB/TrEMBL:A1JI19,NCBI_GP:CAL10257.1;Name=CAL10257.1;Note=Similar in parts to Campylobacter jejuni hypothetical protein Cj0849C SWALL:Q9PP74 (EMBL:AL139076) (719 aa) fasta scores: E(): 0.19%2C 22.86 38d in 258 aa and to Chlamydia pneumoniae phosphoenolpyruvate-protein phosphotransferase PtsI or Cpn0038 SWALL:PT1_CHLPN (SWALL:Q9Z9E3) (571 aa) fasta scores: E(): 3.5%2C 19.57 38d in 332 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9Z9E3;product=hypothetical protein;protein_id=CAL10257.1;transl_table=11
AM286415.1	EMBL	gene	129861	132500	.	-	.	ID=gene117;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;gene_synonym=glu;locus_tag=YE0116
AM286415.1	EMBL	CDS	129861	132500	.	-	0	ID=cds113;Parent=gene117;Dbxref=EnsemblGenomes-Gn:YE0116,EnsemblGenomes-Tr:CAL10258,GOA:A1JI20,InterPro:IPR015813,InterPro:IPR018129,InterPro:IPR021135,InterPro:IPR022805,NCBI_GP:CAL10258.1;Name=CAL10258.1;gbkey=CDS;gene=ppc;product=phosphoenolpyruvate carboxylase;protein_id=CAL10258.1;transl_table=11
AM286415.1	EMBL	sequence_feature	129864	132500	.	-	.	ID=id234;Note=Pfam match to entry PF00311 PEPcase%2CPhosphoenolpyruvate carboxylase%2C score 763.6%2C E-value 5.3e-227;gbkey=misc_feature;gene=ppc;inference=protein motif:PFAM:PF00311
AM286415.1	EMBL	sequence_feature	130857	130895	.	-	.	ID=id235;Note=PS00393 Phosphoenolpyruvate carboxylase active site 2.;gbkey=misc_feature;gene=ppc;inference=protein motif:Prosite:PS00393
AM286415.1	EMBL	sequence_feature	132069	132104	.	-	.	ID=id236;Note=PS00781 Phosphoenolpyruvate carboxylase active site 1.;gbkey=misc_feature;gene=ppc;inference=protein motif:Prosite:PS00781
AM286415.1	EMBL	gene	132848	134032	.	-	.	ID=gene118;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=YE0117
AM286415.1	EMBL	CDS	132848	134032	.	-	0	ID=cds114;Parent=gene118;Dbxref=EnsemblGenomes-Gn:YE0117,EnsemblGenomes-Tr:CAL10259,GOA:A1JI21,InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR010169,InterPro:IPR011650,UniProtKB/TrEMBL:A1JI21,NCBI_GP:CAL10259.1;Name=CAL10259.1;gbkey=CDS;gene=argE;product=acetylornithine deacetylase;protein_id=CAL10259.1;transl_table=11
AM286415.1	EMBL	sequence_feature	133004	133999	.	-	.	ID=id237;Note=Pfam match to entry PF01546 Peptidase_M20%2CPeptidase family M20/M25/M40%2C score 236.5%2C E-value 2.5e-68;gbkey=misc_feature;gene=argE;inference=protein motif:PFAM:PF01546
AM286415.1	EMBL	sequence_feature	133562	133675	.	-	.	ID=id238;Note=PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2.;gbkey=misc_feature;gene=argE;inference=protein motif:Prosite:PS00759
AM286415.1	EMBL	sequence_feature	133751	133780	.	-	.	ID=id239;Note=PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1.;gbkey=misc_feature;gene=argE;inference=protein motif:Prosite:PS00758
AM286415.1	EMBL	gene	134395	135399	.	+	.	ID=gene119;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=YE0119
AM286415.1	EMBL	CDS	134395	135399	.	+	0	ID=cds115;Parent=gene119;Dbxref=EnsemblGenomes-Gn:YE0119,EnsemblGenomes-Tr:CAL10260,GOA:A1JI22,InterPro:IPR000534,InterPro:IPR000706,InterPro:IPR012280,InterPro:IPR016040,InterPro:IPR023013,UniProtKB/TrEMBL:A1JI22,NCBI_GP:CAL10260.1;Name=CAL10260.1;gbkey=CDS;gene=argC;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=CAL10260.1;transl_table=11
AM286415.1	EMBL	sequence_feature	134395	134844	.	+	.	ID=id240;Note=Pfam match to entry PF01118 Semialdhyde_dh%2CSemialdehyde dehydrogenase%2C NAD binding domain%2C score 174.7%2C E-value 1e-49;gbkey=misc_feature;gene=argC;inference=protein motif:PFAM:PF01118
AM286415.1	EMBL	sequence_feature	134629	134658	.	+	.	ID=id241;Note=PS00142 Neutral zinc metallopeptidases%2Czinc-binding region signature.;gbkey=misc_feature;gene=argC;inference=protein motif:Prosite:PS00142
AM286415.1	EMBL	sequence_feature	134839	134889	.	+	.	ID=id242;Note=PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site.;gbkey=misc_feature;gene=argC;inference=protein motif:Prosite:PS01224
AM286415.1	EMBL	sequence_feature	134869	135327	.	+	.	ID=id243;Note=Pfam match to entry PF02774 Semialdhyde_dhC%2CSemialdehyde dehydrogenase%2C dimerisation domain%2C score 103.9%2C E-value 2e-28;gbkey=misc_feature;gene=argC;inference=protein motif:PFAM:PF02774
AM286415.1	EMBL	gene	135487	136251	.	+	.	ID=gene120;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=YE0120
AM286415.1	EMBL	CDS	135487	136251	.	+	0	ID=cds116;Parent=gene120;Dbxref=EnsemblGenomes-Gn:YE0120,EnsemblGenomes-Tr:CAL10261,GOA:A1JI23,InterPro:IPR001048,InterPro:IPR004662,NCBI_GP:CAL10261.1;Name=CAL10261.1;gbkey=CDS;gene=argB;product=acetylglutamate kinase;protein_id=CAL10261.1;transl_table=11
AM286415.1	EMBL	sequence_feature	135487	136182	.	+	.	ID=id244;Note=Pfam match to entry PF00696 aakinase%2C Amino acid kinase family%2C score 120.0%2C E-value 2.8e-33;gbkey=misc_feature;gene=argB;inference=protein motif:PFAM:PF00696
AM286415.1	EMBL	gene	136489	137862	.	+	.	ID=gene121;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=YE0121
AM286415.1	EMBL	CDS	136489	137862	.	+	0	ID=cds117;Parent=gene121;Dbxref=EnsemblGenomes-Gn:YE0121,EnsemblGenomes-Tr:CAL10262,GOA:A1JI24,InterPro:IPR000362,InterPro:IPR008948,InterPro:IPR009049,InterPro:IPR020557,InterPro:IPR022761,InterPro:IPR024083,InterPro:IPR029419,NCBI_GP:CAL10262.1;Name=CAL10262.1;gbkey=CDS;gene=argH;product=putative argininosuccinate lyase;protein_id=CAL10262.1;transl_table=11
AM286415.1	EMBL	sequence_feature	136504	137784	.	+	.	ID=id245;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 606.8%2C E-value 8.1e-180;gbkey=misc_feature;gene=argH;inference=protein motif:PFAM:PF00206
AM286415.1	EMBL	sequence_feature	137314	137343	.	+	.	ID=id246;Note=PS00163 Fumarate lyases signature.;gbkey=misc_feature;gene=argH;inference=protein motif:Prosite:PS00163
AM286415.1	EMBL	pseudogene	138428	140911	.	+	.	ID=gene122;Name=YE0122;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0122;pseudo=true
AM286415.1	EMBL	CDS	138428	140911	.	+	0	ID=cds118;Parent=gene122;Dbxref=PSEUDO:CAL10263.2;gbkey=CDS;product=putative TonB dependent receptor protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	140567	140908	.	+	.	ID=id247;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 31.5%2C E-value 1.3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	gene	141014	141649	.	+	.	ID=gene123;Name=YE0123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0123
AM286415.1	EMBL	CDS	141014	141649	.	+	0	ID=cds119;Parent=gene123;Dbxref=EnsemblGenomes-Gn:YE0123,EnsemblGenomes-Tr:CAL10264,InterPro:IPR010495,UniProtKB/TrEMBL:A1JI26,NCBI_GP:CAL10264.1;Name=CAL10264.1;gbkey=CDS;product=hemophore HasA;protein_id=CAL10264.1;transl_table=11
AM286415.1	EMBL	sequence_feature	141404	141427	.	+	.	ID=id248;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	141797	142450	.	+	.	ID=gene124;Name=YE0124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0124
AM286415.1	EMBL	CDS	141797	142450	.	+	0	ID=cds120;Parent=gene124;Dbxref=EnsemblGenomes-Gn:YE0124,EnsemblGenomes-Tr:CAL10265,InterPro:IPR010495,UniProtKB/TrEMBL:A1JI27,NCBI_GP:CAL10265.1;Name=CAL10265.1;Note=Similar to Yersinia pestis hemophore HasA or Ypo3922 SWALL:Q8ZA90 (EMBL:AJ414159) (205 aa) fasta scores: E(): 1.5e-05%2C 28.05 38d in 221 aa. Note the product of this CDS is also significantly similar to the CDS directly upstream and downstream%2C YE0123%2C YE0125 and YE0126.;gbkey=CDS;inference=similar to sequence:INSDC:AJ414159;product=probable hemophore;protein_id=CAL10265.1;transl_table=11
AM286415.1	EMBL	gene	142509	143150	.	+	.	ID=gene125;Name=YE0125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0125
AM286415.1	EMBL	CDS	142509	143150	.	+	0	ID=cds121;Parent=gene125;Dbxref=EnsemblGenomes-Gn:YE0125,EnsemblGenomes-Tr:CAL10266,InterPro:IPR010495,UniProtKB/TrEMBL:A1JI28,NCBI_GP:CAL10266.1;Name=CAL10266.1;Note=Similar to Yersinia pestis hemophore HasA or Ypo3922 SWALL:Q8ZA90 (EMBL:AJ414159) (205 aa) fasta scores: E(): 1.8e-08%2C 33.48 38d in 218 aa and Serratia marcescens hemophore HasA SWALL:HASA_SERMA (SWALL:Q54450) (188 aa) fasta scores: E(): 0.051%2C 23.38 38d in 201 aa. Note the product of this CDS is also significantly similar to the CDS directly upstream and downstream%2C YE0123%2CYE0124 and YE0126.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q54450;product=probable hemophore;protein_id=CAL10266.1;transl_table=11
AM286415.1	EMBL	gene	143211	143819	.	+	.	ID=gene126;Name=YE0126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0126
AM286415.1	EMBL	CDS	143211	143819	.	+	0	ID=cds122;Parent=gene126;Dbxref=EnsemblGenomes-Gn:YE0126,EnsemblGenomes-Tr:CAL10267,InterPro:IPR010495,UniProtKB/TrEMBL:A1JI29,NCBI_GP:CAL10267.1;Name=CAL10267.1;Note=Similar to Yersinia pestis hemophore HasA or Ypo3922 SWALL:Q8ZA90 (EMBL:AJ414159) (205 aa) fasta scores: E(): 2.1e-13%2C 28.23 38d in 209 aa. Note the product of this CDS is also significantly similar to the CDS directly upstream%2C YE0123%2C YE0124 and YE0125.;gbkey=CDS;inference=similar to sequence:INSDC:AJ414159;product=probable hemophore;protein_id=CAL10267.1;transl_table=11
AM286415.1	EMBL	gene	144005	145786	.	+	.	ID=gene127;Name=YE0127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0127
AM286415.1	EMBL	CDS	144005	145786	.	+	0	ID=cds123;Parent=gene127;Dbxref=EnsemblGenomes-Gn:YE0127,EnsemblGenomes-Tr:CAL10268,GOA:A1JI30,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010128,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JI30,NCBI_GP:CAL10268.1;Name=CAL10268.1;gbkey=CDS;product=ABC transporter protein;protein_id=CAL10268.1;transl_table=11
AM286415.1	EMBL	sequence_feature	144080	144148	.	+	.	ID=id249;Note=5 probable transmembrane helices predicted for YE0127 by TMHMM2.0 at aa 26-48%2C 63-85%2C 136-158%2C 162-184 and 264-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	144191	144259	.	+	.	ID=id249;Note=5 probable transmembrane helices predicted for YE0127 by TMHMM2.0 at aa 26-48%2C 63-85%2C 136-158%2C 162-184 and 264-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	144410	144478	.	+	.	ID=id249;Note=5 probable transmembrane helices predicted for YE0127 by TMHMM2.0 at aa 26-48%2C 63-85%2C 136-158%2C 162-184 and 264-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	144488	144556	.	+	.	ID=id249;Note=5 probable transmembrane helices predicted for YE0127 by TMHMM2.0 at aa 26-48%2C 63-85%2C 136-158%2C 162-184 and 264-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	144794	144862	.	+	.	ID=id249;Note=5 probable transmembrane helices predicted for YE0127 by TMHMM2.0 at aa 26-48%2C 63-85%2C 136-158%2C 162-184 and 264-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	144083	144883	.	+	.	ID=id250;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 19.6%2C E-value 4.6e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	145091	145645	.	+	.	ID=id251;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 204.6%2C E-value 1e-58;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	145112	145135	.	+	.	ID=id252;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	145421	145465	.	+	.	ID=id253;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	145917	147149	.	+	.	ID=gene128;Name=YE0128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0128
AM286415.1	EMBL	CDS	145917	147149	.	+	0	ID=cds124;Parent=gene128;Dbxref=EnsemblGenomes-Gn:YE0128,EnsemblGenomes-Tr:CAL10269,GOA:A1JI31,InterPro:IPR003997,InterPro:IPR006143,InterPro:IPR010129,UniProtKB/TrEMBL:A1JI31,NCBI_GP:CAL10269.1;Name=CAL10269.1;gbkey=CDS;product=HlyD family secretion protein;protein_id=CAL10269.1;transl_table=11
AM286415.1	EMBL	sequence_feature	146013	146948	.	+	.	ID=id254;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 152.6%2C E-value 4.5e-43;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	gene	147226	148026	.	+	.	ID=gene129;Name=YE0129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0129
AM286415.1	EMBL	CDS	147226	148026	.	+	0	ID=cds125;Parent=gene129;Dbxref=EnsemblGenomes-Gn:YE0129,EnsemblGenomes-Tr:CAL10270,GOA:A1JI32,InterPro:IPR006260,UniProtKB/TrEMBL:A1JI32,NCBI_GP:CAL10270.1;Name=CAL10270.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10270.1;transl_table=11
AM286415.1	EMBL	repeat_region	148088	149391	.	-	.	ID=id255;Note=IS1330;gbkey=repeat_region
AM286415.1	EMBL	gene	148114	149307	.	-	.	ID=gene130;Name=tpn1330;gbkey=Gene;gene=tpn1330;gene_biotype=protein_coding;locus_tag=YE0130
AM286415.1	EMBL	CDS	148114	149307	.	-	0	ID=cds126;Parent=gene130;Dbxref=EnsemblGenomes-Gn:YE0130,EnsemblGenomes-Tr:CAL10271,GOA:A1JI33,InterPro:IPR002559,InterPro:IPR012337,UniProtKB/TrEMBL:A1JI33,NCBI_GP:CAL10271.1;Name=CAL10271.1;Note=Previously sequenced as Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:Q8RSF5 (EMBL:AJ344215) (397 aa) fasta scores: E(): 2.6e-162%2C99.24 38d in 397 aa. Also similar to Escherichia coli%2C and Salmonella typhi IS 10 transposase SWALL:Q53371 (EMBL:S67119) (402 aa) fasta scores: E(): 2e-43%2C 35.27 38d in 394 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:S67119;product=transposase for IS1330;protein_id=CAL10271.1;transl_table=11
AM286415.1	EMBL	sequence_feature	148318	149037	.	-	.	ID=id256;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 52.8%2C E-value 4.8e-13;gbkey=misc_feature;gene=tpn1330;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	gene	149422	150870	.	-	.	ID=gene131;Name=YE0131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0131
AM286415.1	EMBL	CDS	149422	150870	.	-	0	ID=cds127;Parent=gene131;Dbxref=EnsemblGenomes-Gn:YE0131,EnsemblGenomes-Tr:CAL10272,GOA:A1JI34,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR013027,InterPro:IPR016156,InterPro:IPR023753,UniProtKB/TrEMBL:A1JI34,NCBI_GP:CAL10272.1;Name=CAL10272.1;gbkey=CDS;product=putative pyridine nucleotide-disulphide oxidoreductase;protein_id=CAL10272.1;transl_table=11
AM286415.1	EMBL	sequence_feature	149494	149826	.	-	.	ID=id257;Note=Pfam match to entry PF02852 pyr_redox_dim%2C Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%2C score 48.8%2C E-value 7.9e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF02852
AM286415.1	EMBL	sequence_feature	149908	150852	.	-	.	ID=id258;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 150.3%2CE-value 2.2e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF00070
AM286415.1	EMBL	gene	151070	151801	.	-	.	ID=gene132;Name=YE0132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0132
AM286415.1	EMBL	CDS	151070	151801	.	-	0	ID=cds128;Parent=gene132;Dbxref=EnsemblGenomes-Gn:YE0132,EnsemblGenomes-Tr:CAL10273,GOA:A1JI35,InterPro:IPR002109,InterPro:IPR011767,InterPro:IPR011906,InterPro:IPR012336,InterPro:IPR013740,InterPro:IPR014025,UniProtKB/TrEMBL:A1JI35,NCBI_GP:CAL10273.1;Name=CAL10273.1;gbkey=CDS;product=putative peroxiredoxin/glutaredoxin family protein;protein_id=CAL10273.1;transl_table=11
AM286415.1	EMBL	sequence_feature	151118	151288	.	-	.	ID=id259;Note=Pfam match to entry PF00462 glutaredoxin%2CGlutaredoxin%2C score 42.7%2C E-value 5.5e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00462
AM286415.1	EMBL	sequence_feature	151229	151279	.	-	.	ID=id260;Note=PS00195 Glutaredoxin active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00195
AM286415.1	EMBL	sequence_feature	151319	151786	.	-	.	ID=id261;Note=Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family%2C score 159.1%2C E-value 4.8e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF00578
AM286415.1	EMBL	gene	151949	152881	.	+	.	ID=gene133;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=YE0133
AM286415.1	EMBL	CDS	151949	152881	.	+	0	ID=cds129;Parent=gene133;Dbxref=EnsemblGenomes-Gn:YE0133,EnsemblGenomes-Tr:CAL10274,GOA:A1JI36,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JI36,NCBI_GP:CAL10274.1;Name=CAL10274.1;gbkey=CDS;gene=oxyR;product=oxidative stress transcriptional regulatory protein;protein_id=CAL10274.1;transl_table=11
AM286415.1	EMBL	sequence_feature	151955	152134	.	+	.	ID=id262;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 97.2%2C E-value 2.1e-26;gbkey=misc_feature;gene=oxyR;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	151994	152059	.	+	.	ID=id263;Note=Predicted helix-turn-helix motif with score 1674.000%2C SD 4.89 at aa 16-37%2C sequence RHFRRAADSCHVSQPTLSGQIR;gbkey=misc_feature;gene=oxyR
AM286415.1	EMBL	sequence_feature	151997	152089	.	+	.	ID=id264;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=oxyR;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	152204	152830	.	+	.	ID=id265;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 202.6%2C E-value 3.9e-58;gbkey=misc_feature;gene=oxyR;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	152864	154264	.	-	.	ID=gene134;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;gene_synonym=sth,udhA;locus_tag=YE0134
AM286415.1	EMBL	CDS	152864	154264	.	-	0	ID=cds130;Parent=gene134;Dbxref=EnsemblGenomes-Gn:YE0134,EnsemblGenomes-Tr:CAL10275,GOA:A1JI37,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR013027,InterPro:IPR016156,InterPro:IPR022962,InterPro:IPR023753,NCBI_GP:CAL10275.1;Name=CAL10275.1;gbkey=CDS;gene=sthA;product=soluble pyridine nucleotide transhydrogenase;protein_id=CAL10275.1;transl_table=11
AM286415.1	EMBL	sequence_feature	152891	153229	.	-	.	ID=id266;Note=Pfam match to entry PF02852 pyr_redox_dim%2C Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%2C score 134.6%2C E-value 1.2e-37;gbkey=misc_feature;gene=sthA;inference=protein motif:PFAM:PF02852
AM286415.1	EMBL	sequence_feature	153302	154243	.	-	.	ID=id267;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 251.7%2CE-value 6.7e-73;gbkey=misc_feature;gene=sthA;inference=protein motif:PFAM:PF00070
AM286415.1	EMBL	sequence_feature	153698	153730	.	-	.	ID=id268;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=sthA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	154470	155114	.	+	.	ID=gene135;Name=YE0135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0135
AM286415.1	EMBL	CDS	154470	155114	.	+	0	ID=cds131;Parent=gene135;Dbxref=EnsemblGenomes-Gn:YE0135,EnsemblGenomes-Tr:CAL10276,GOA:A1JI38,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR015893,InterPro:IPR023764,NCBI_GP:CAL10276.1;Name=CAL10276.1;gbkey=CDS;product=TetR-family transcriptional regulatory protein;protein_id=CAL10276.1;transl_table=11
AM286415.1	EMBL	sequence_feature	154524	154667	.	+	.	ID=id269;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 46.6%2C E-value 3.7e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00440
AM286415.1	EMBL	sequence_feature	154575	154640	.	+	.	ID=id270;Note=Predicted helix-turn-helix motif with score 1615.000%2C SD 4.69 at aa 36-57%2C sequence LSLREVSREAGIAPTSFYRHFR;gbkey=misc_feature
AM286415.1	EMBL	gene	155245	155607	.	+	.	ID=gene136;Name=yijD;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=YE0136
AM286415.1	EMBL	CDS	155245	155607	.	+	0	ID=cds132;Parent=gene136;Dbxref=EnsemblGenomes-Gn:YE0136,EnsemblGenomes-Tr:CAL10277,InterPro:IPR009867,UniProtKB/TrEMBL:A1JI39,NCBI_GP:CAL10277.1;Name=CAL10277.1;gbkey=CDS;gene=yijD;product=putative membrane protein;protein_id=CAL10277.1;transl_table=11
AM286415.1	EMBL	sequence_feature	155287	155355	.	+	.	ID=id271;Note=3 probable transmembrane helices predicted for YE0136 by TMHMM2.0 at aa 15-37%2C 49-68 and 72-94;gbkey=misc_feature;gene=yijD;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	155389	155448	.	+	.	ID=id271;Note=3 probable transmembrane helices predicted for YE0136 by TMHMM2.0 at aa 15-37%2C 49-68 and 72-94;gbkey=misc_feature;gene=yijD;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	155458	155526	.	+	.	ID=id271;Note=3 probable transmembrane helices predicted for YE0136 by TMHMM2.0 at aa 15-37%2C 49-68 and 72-94;gbkey=misc_feature;gene=yijD;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	155380	155412	.	+	.	ID=id272;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yijD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	155840	156943	.	-	.	ID=gene137;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=YE0138
AM286415.1	EMBL	CDS	155840	156943	.	-	0	ID=cds133;Parent=gene137;Dbxref=EnsemblGenomes-Gn:YE0138,EnsemblGenomes-Tr:CAL10278,GOA:A1JI40,InterPro:IPR010280,InterPro:IPR011869,InterPro:IPR029063,NCBI_GP:CAL10278.1;Name=CAL10278.1;gbkey=CDS;gene=trmA;product=tRNA (uracil-5)-methyltransferase;protein_id=CAL10278.1;transl_table=11
AM286415.1	EMBL	sequence_feature	155870	155902	.	-	.	ID=id273;Note=PS01231 RNA methyltransferase trmA family signature 2.;gbkey=misc_feature;gene=trmA;inference=protein motif:Prosite:PS01231
AM286415.1	EMBL	sequence_feature	155960	156049	.	-	.	ID=id274;Note=PS01230 RNA methyltransferase trmA family signature 1.;gbkey=misc_feature;gene=trmA;inference=protein motif:Prosite:PS01230
AM286415.1	EMBL	transcript	157085	157301	.	+	.	ID=rna6;Note=Cobalamin riboswitch (RF00174) as predicted by Rfam%2C score 104.18%2C positions 1 to 190;gbkey=misc_RNA
AM286415.1	EMBL	exon	157085	157301	.	+	.	ID=id275;Parent=rna6;Note=Cobalamin riboswitch (RF00174) as predicted by Rfam%2C score 104.18%2C positions 1 to 190;gbkey=misc_RNA
AM286415.1	EMBL	gene	157369	159267	.	+	.	ID=gene138;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=YE0139
AM286415.1	EMBL	CDS	157369	159267	.	+	0	ID=cds134;Parent=gene138;Dbxref=EnsemblGenomes-Gn:YE0139,EnsemblGenomes-Tr:CAL10279,GOA:A1JI41,InterPro:IPR000531,InterPro:IPR010101,InterPro:IPR010917,InterPro:IPR012910,UniProtKB/TrEMBL:A1JI41,NCBI_GP:CAL10279.1;Name=CAL10279.1;Note=Similar to Escherichia coli vitamin B12 receptor precursor Btub or Bfe or Cer or DcrC or B3966 SWALL:BTUB_ECOLI (SWALL:P06129) (614 aa) fasta scores: E(): 2.3e-123%2C 52.7 38d in 628 aa%2C and to Yersinia pestis putative vitamin B12 receptor protein Ypo3910 SWALL:Q8ZAA1 (EMBL:AJ414159) (625 aa) fasta scores: E(): 5.4e-144%2C58.45 38d in 633 aa;gbkey=CDS;gene=btuB;inference=similar to sequence:UniProtKB:P06129;product=exported vitamin B12 receptor protein;protein_id=CAL10279.1;transl_table=11
AM286415.1	EMBL	sequence_feature	158959	159264	.	+	.	ID=id276;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 71.2%2C E-value 1.4e-18;gbkey=misc_feature;gene=btuB;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	sequence_feature	159211	159264	.	+	.	ID=id277;Note=PS01156 TonB-dependent receptor proteins signature 2.;gbkey=misc_feature;gene=btuB;inference=protein motif:Prosite:PS01156
AM286415.1	EMBL	gene	159212	160075	.	+	.	ID=gene139;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;gene_synonym=dga,glr;locus_tag=YE0140
AM286415.1	EMBL	CDS	159212	160075	.	+	0	ID=cds135;Parent=gene139;Dbxref=EnsemblGenomes-Gn:YE0140,EnsemblGenomes-Tr:CAL10280,GOA:A1JI42,InterPro:IPR001920,InterPro:IPR004391,InterPro:IPR015942,InterPro:IPR018187,NCBI_GP:CAL10280.1;Name=CAL10280.1;gbkey=CDS;gene=murI;product=putative glutamate racemase;protein_id=CAL10280.1;transl_table=11
AM286415.1	EMBL	sequence_feature	159293	159943	.	+	.	ID=id278;Note=Pfam match to entry PF01177 Asp_Glu_race%2CAsp/Glu/Hydontoin racemase%2C score 337.7%2C E-value 8.3e-99;gbkey=misc_feature;gene=murI;inference=protein motif:PFAM:PF01177
AM286415.1	EMBL	sequence_feature	159488	159514	.	+	.	ID=id279;Note=PS00923 Aspartate and glutamate racemases signature 1.;gbkey=misc_feature;gene=murI;inference=protein motif:Prosite:PS00923
AM286415.1	EMBL	sequence_feature	159821	159853	.	+	.	ID=id280;Note=PS00924 Aspartate and glutamate racemases signature 2.;gbkey=misc_feature;gene=murI;inference=protein motif:Prosite:PS00924
AM286415.1	EMBL	gene	160552	162040	.	+	.	ID=gene140;Name=16S rRNA;gbkey=Gene;gene=16S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	160552	162040	.	+	.	ID=rna7;Parent=gene140;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	exon	160552	162040	.	+	.	ID=id281;Parent=rna7;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	gene	162169	162245	.	+	.	ID=gene141;Name=tRNA-Ile (GAT);gbkey=Gene;gene=tRNA-Ile (GAT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	162169	162245	.	+	.	ID=rna8;Parent=gene141;gbkey=tRNA;gene=tRNA-Ile (GAT);product=tRNA-Ile
AM286415.1	EMBL	exon	162169	162245	.	+	.	ID=id282;Parent=rna8;gbkey=tRNA;gene=tRNA-Ile (GAT);product=tRNA-Ile
AM286415.1	EMBL	gene	162320	162395	.	+	.	ID=gene142;Name=tRNA-Ala (TGC);gbkey=Gene;gene=tRNA-Ala (TGC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	162320	162395	.	+	.	ID=rna9;Parent=gene142;gbkey=tRNA;gene=tRNA-Ala (TGC);product=tRNA-Ala
AM286415.1	EMBL	exon	162320	162395	.	+	.	ID=id283;Parent=rna9;gbkey=tRNA;gene=tRNA-Ala (TGC);product=tRNA-Ala
AM286415.1	EMBL	gene	162741	165734	.	+	.	ID=gene143;Name=23S rRNA;gbkey=Gene;gene=23S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	162741	165734	.	+	.	ID=rna10;Parent=gene143;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	exon	162741	165734	.	+	.	ID=id284;Parent=rna10;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	gene	165734	165970	.	+	.	ID=gene144;Name=5S rRNA;gbkey=Gene;gene=5S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	165734	165970	.	+	.	ID=rna11;Parent=gene144;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	exon	165734	165970	.	+	.	ID=id285;Parent=rna11;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	gene	166090	166166	.	+	.	ID=gene145;Name=tRNA-Asp (GTC);gbkey=Gene;gene=tRNA-Asp (GTC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	166090	166166	.	+	.	ID=rna12;Parent=gene145;gbkey=tRNA;gene=tRNA-Asp (GTC);product=tRNA-Asp
AM286415.1	EMBL	exon	166090	166166	.	+	.	ID=id286;Parent=rna12;gbkey=tRNA;gene=tRNA-Asp (GTC);product=tRNA-Asp
AM286415.1	EMBL	gene	166220	166295	.	+	.	ID=gene146;Name=tRNA-Trp (CCA);gbkey=Gene;gene=tRNA-Trp (CCA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	166220	166295	.	+	.	ID=rna13;Parent=gene146;gbkey=tRNA;gene=tRNA-Trp (CCA);product=tRNA-Trp
AM286415.1	EMBL	exon	166220	166295	.	+	.	ID=id287;Parent=rna13;gbkey=tRNA;gene=tRNA-Trp (CCA);product=tRNA-Trp
AM286415.1	EMBL	gene	166814	167770	.	+	.	ID=gene147;Name=YE0141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0141
AM286415.1	EMBL	CDS	166814	167770	.	+	0	ID=cds136;Parent=gene147;Dbxref=EnsemblGenomes-Gn:YE0141,EnsemblGenomes-Tr:CAL10281,InterPro:IPR025997,InterPro:IPR028082,UniProtKB/TrEMBL:A1JI43,NCBI_GP:CAL10281.1;Name=CAL10281.1;gbkey=CDS;product=putative periplasmic protein precursor;protein_id=CAL10281.1;transl_table=11
AM286415.1	EMBL	sequence_feature	166826	166894	.	+	.	ID=id288;Note=1 probable transmembrane helix predicted for YE0141 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	166880	167743	.	+	.	ID=id289;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 2.7%2C E-value 1e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	167855	169345	.	+	.	ID=gene148;Name=YE0142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0142
AM286415.1	EMBL	CDS	167855	169345	.	+	0	ID=cds137;Parent=gene148;Dbxref=EnsemblGenomes-Gn:YE0142,EnsemblGenomes-Tr:CAL10282,GOA:A1JI44,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JI44,NCBI_GP:CAL10282.1;Name=CAL10282.1;gbkey=CDS;product=putative sugar transport system ATP-binding protein;protein_id=CAL10282.1;transl_table=11
AM286415.1	EMBL	sequence_feature	167942	168502	.	+	.	ID=id290;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 196.8%2C E-value 2.1e-56;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	167963	167986	.	+	.	ID=id291;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	168695	169273	.	+	.	ID=id292;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 101.9%2C E-value 8.2e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	169046	169090	.	+	.	ID=id293;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	169357	170376	.	+	.	ID=gene149;Name=YE0143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0143
AM286415.1	EMBL	CDS	169357	170376	.	+	0	ID=cds138;Parent=gene149;Dbxref=EnsemblGenomes-Gn:YE0143,EnsemblGenomes-Tr:CAL10283,GOA:A1JI45,InterPro:IPR001851,UniProtKB/TrEMBL:A1JI45,NCBI_GP:CAL10283.1;Name=CAL10283.1;gbkey=CDS;product=putative sugar transport system permease;protein_id=CAL10283.1;transl_table=11
AM286415.1	EMBL	sequence_feature	169432	169500	.	+	.	ID=id294;Note=9 probable transmembrane helices predicted for YE0143 by TMHMM2.0 at aa 26-48%2C 69-91%2C 111-133%2C 138-160%2C175-197%2C 225-247%2C 257-276%2C 283-305 and 315-335;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	169561	169629	.	+	.	ID=id294;Note=9 probable transmembrane helices predicted for YE0143 by TMHMM2.0 at aa 26-48%2C 69-91%2C 111-133%2C 138-160%2C175-197%2C 225-247%2C 257-276%2C 283-305 and 315-335;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	169687	169755	.	+	.	ID=id294;Note=9 probable transmembrane helices predicted for YE0143 by TMHMM2.0 at aa 26-48%2C 69-91%2C 111-133%2C 138-160%2C175-197%2C 225-247%2C 257-276%2C 283-305 and 315-335;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	169768	169836	.	+	.	ID=id294;Note=9 probable transmembrane helices predicted for YE0143 by TMHMM2.0 at aa 26-48%2C 69-91%2C 111-133%2C 138-160%2C175-197%2C 225-247%2C 257-276%2C 283-305 and 315-335;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	169879	169947	.	+	.	ID=id294;Note=9 probable transmembrane helices predicted for YE0143 by TMHMM2.0 at aa 26-48%2C 69-91%2C 111-133%2C 138-160%2C175-197%2C 225-247%2C 257-276%2C 283-305 and 315-335;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	170029	170097	.	+	.	ID=id294;Note=9 probable transmembrane helices predicted for YE0143 by TMHMM2.0 at aa 26-48%2C 69-91%2C 111-133%2C 138-160%2C175-197%2C 225-247%2C 257-276%2C 283-305 and 315-335;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	170125	170184	.	+	.	ID=id294;Note=9 probable transmembrane helices predicted for YE0143 by TMHMM2.0 at aa 26-48%2C 69-91%2C 111-133%2C 138-160%2C175-197%2C 225-247%2C 257-276%2C 283-305 and 315-335;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	170203	170271	.	+	.	ID=id294;Note=9 probable transmembrane helices predicted for YE0143 by TMHMM2.0 at aa 26-48%2C 69-91%2C 111-133%2C 138-160%2C175-197%2C 225-247%2C 257-276%2C 283-305 and 315-335;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	170299	170361	.	+	.	ID=id294;Note=9 probable transmembrane helices predicted for YE0143 by TMHMM2.0 at aa 26-48%2C 69-91%2C 111-133%2C 138-160%2C175-197%2C 225-247%2C 257-276%2C 283-305 and 315-335;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	170376	171344	.	+	.	ID=gene150;Name=YE0144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0144
AM286415.1	EMBL	CDS	170376	171344	.	+	0	ID=cds139;Parent=gene150;Dbxref=EnsemblGenomes-Gn:YE0144,EnsemblGenomes-Tr:CAL10284,GOA:A1JI46,InterPro:IPR001851,UniProtKB/TrEMBL:A1JI46,NCBI_GP:CAL10284.1;Name=CAL10284.1;gbkey=CDS;product=putative sugar transport system permease;protein_id=CAL10284.1;transl_table=11
AM286415.1	EMBL	sequence_feature	170466	171329	.	+	.	ID=id295;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score -43.8%2C E-value 0.00011;gbkey=misc_feature;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	sequence_feature	170946	170993	.	+	.	ID=id296;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00012
AM286415.1	EMBL	gene	171355	172236	.	-	.	ID=gene151;Name=YE0145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0145
AM286415.1	EMBL	CDS	171355	172236	.	-	0	ID=cds140;Parent=gene151;Dbxref=EnsemblGenomes-Gn:YE0145,EnsemblGenomes-Tr:CAL10285,GOA:A1JI47,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,InterPro:IPR020890,NCBI_GP:CAL10285.1;Name=CAL10285.1;gbkey=CDS;product=LysR-family transcriptional regulatory protein;protein_id=CAL10285.1;transl_table=11
AM286415.1	EMBL	sequence_feature	171376	171987	.	-	.	ID=id297;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 56.9%2C E-value 3e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	172051	172230	.	-	.	ID=id298;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 97.3%2C E-value 2e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	172096	172188	.	-	.	ID=id299;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	172126	172191	.	-	.	ID=id300;Note=Predicted helix-turn-helix motif with score 1285.000%2C SD 3.56 at aa 16-37%2C sequence RHFGRAAESLYLTQSAVSFRIR;gbkey=misc_feature
AM286415.1	EMBL	gene	172356	172694	.	+	.	ID=gene152;Name=YE0146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0146
AM286415.1	EMBL	CDS	172356	172694	.	+	0	ID=cds141;Parent=gene152;Dbxref=EnsemblGenomes-Gn:YE0146,EnsemblGenomes-Tr:CAL10286,InterPro:IPR007335,UniProtKB/TrEMBL:A1JI48,NCBI_GP:CAL10286.1;Name=CAL10286.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10286.1;transl_table=11
AM286415.1	EMBL	gene	172798	174321	.	-	.	ID=gene153;Name=YE0147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0147
AM286415.1	EMBL	CDS	172798	174321	.	-	0	ID=cds142;Parent=gene153;Dbxref=EnsemblGenomes-Gn:YE0147,EnsemblGenomes-Tr:CAL10287,GOA:A1JI49,InterPro:IPR000523,InterPro:IPR001208,InterPro:IPR003593,InterPro:IPR004482,InterPro:IPR014721,InterPro:IPR020568,InterPro:IPR025158,InterPro:IPR027417,UniProtKB/TrEMBL:A1JI49,NCBI_GP:CAL10287.1;Name=CAL10287.1;gbkey=CDS;product=putative magnesium chelatase family protein;protein_id=CAL10287.1;transl_table=11
AM286415.1	EMBL	sequence_feature	172921	172986	.	-	.	ID=id301;Note=Predicted helix-turn-helix motif with score 1104.000%2C SD 2.95 at aa 446-467%2C sequence VFLEQVLLKLGLSVRTWHHILK;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	173290	174267	.	-	.	ID=id302;Note=Pfam match to entry PF01078 Mg_chelatase%2C Magnesium chelatase%2C subunit ChlI%2C score 299.4%2C E-value 2.8e-87;gbkey=misc_feature;inference=protein motif:PFAM:PF01078
AM286415.1	EMBL	sequence_feature	173647	173670	.	-	.	ID=id303;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	174892	176538	.	+	.	ID=gene154;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=YE0148
AM286415.1	EMBL	CDS	174892	176538	.	+	0	ID=cds143;Parent=gene154;Dbxref=EnsemblGenomes-Gn:YE0148,EnsemblGenomes-Tr:CAL10288,GOA:A1JI50,InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012846,InterPro:IPR029035,InterPro:IPR029061,UniProtKB/TrEMBL:A1JI50,NCBI_GP:CAL10288.1;Name=CAL10288.1;gbkey=CDS;gene=ilvG;product=acetolactate synthase isozyme II large subunit;protein_id=CAL10288.1;transl_table=11
AM286415.1	EMBL	sequence_feature	174892	175401	.	+	.	ID=id304;Note=Pfam match to entry PF02776 TPP_enzymes_N%2C Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain %2Cscore 332.6%2C E-value 3e-97;gbkey=misc_feature;gene=ilvG;inference=protein motif:PFAM:PF02776
AM286415.1	EMBL	sequence_feature	175069	175161	.	+	.	ID=id305;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=ilvG;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	175435	175896	.	+	.	ID=id306;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzyme%2C central domain%2C score 229.7%2CE-value 2.7e-66;gbkey=misc_feature;gene=ilvG;inference=protein motif:PFAM:PF00205
AM286415.1	EMBL	sequence_feature	175933	176457	.	+	.	ID=id307;Note=Pfam match to entry PF02775 TPP_enzymes_C%2C Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain %2Cscore 300.1%2C E-value 1.7e-87;gbkey=misc_feature;gene=ilvG;inference=protein motif:PFAM:PF02775
AM286415.1	EMBL	sequence_feature	176122	176181	.	+	.	ID=id308;Note=PS00187 Thiamine pyrophosphate enzymes signature.;gbkey=misc_feature;gene=ilvG;inference=protein motif:Prosite:PS00187
AM286415.1	EMBL	gene	176535	176792	.	+	.	ID=gene155;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=YE0149
AM286415.1	EMBL	CDS	176535	176792	.	+	0	ID=cds144;Parent=gene155;Dbxref=EnsemblGenomes-Gn:YE0149,EnsemblGenomes-Tr:CAL10289,UniProtKB/TrEMBL:A1JI51,NCBI_GP:CAL10289.1;Name=CAL10289.1;gbkey=CDS;gene=ilvM;product=acetolactate synthase isozyme II small subunit;protein_id=CAL10289.1;transl_table=11
AM286415.1	EMBL	gene	176815	177741	.	+	.	ID=gene156;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=YE0150
AM286415.1	EMBL	CDS	176815	177741	.	+	0	ID=cds145;Parent=gene156;Dbxref=EnsemblGenomes-Gn:YE0150,EnsemblGenomes-Tr:CAL10290,GOA:A1JI52,InterPro:IPR001544,InterPro:IPR005785,InterPro:IPR018300,UniProtKB/TrEMBL:A1JI52,NCBI_GP:CAL10290.1;Name=CAL10290.1;gbkey=CDS;gene=ilvE;product=branched-chain amino acid aminotransferase;protein_id=CAL10290.1;transl_table=11
AM286415.1	EMBL	sequence_feature	176845	177681	.	+	.	ID=id309;Note=Pfam match to entry PF01063 aminotran_4%2CAminotransferase class IV%2C score 460.9%2C E-value 7e-136;gbkey=misc_feature;gene=ilvE;inference=protein motif:PFAM:PF01063
AM286415.1	EMBL	sequence_feature	177391	177480	.	+	.	ID=id310;Note=PS00770 Aminotransferases class-IV signature.;gbkey=misc_feature;gene=ilvE;inference=protein motif:Prosite:PS00770
AM286415.1	EMBL	gene	177853	179703	.	+	.	ID=gene157;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=YE0151
AM286415.1	EMBL	CDS	177853	179703	.	+	0	ID=cds146;Parent=gene157;Dbxref=EnsemblGenomes-Gn:YE0151,EnsemblGenomes-Tr:CAL10291,GOA:A1JI53,InterPro:IPR000581,InterPro:IPR004404,InterPro:IPR015928,InterPro:IPR020558,NCBI_GP:CAL10291.1;Name=CAL10291.1;gbkey=CDS;gene=ilvD;product=dihydroxy-acid dehydratase;protein_id=CAL10291.1;transl_table=11
AM286415.1	EMBL	sequence_feature	177952	179682	.	+	.	ID=id311;Note=Pfam match to entry PF00920 ILVD_EDD%2C Dehydratase family%2C score 1247.3%2C E-value 0;gbkey=misc_feature;gene=ilvD;inference=protein motif:PFAM:PF00920
AM286415.1	EMBL	sequence_feature	178216	178248	.	+	.	ID=id312;Note=PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1.;gbkey=misc_feature;gene=ilvD;inference=protein motif:Prosite:PS00886
AM286415.1	EMBL	sequence_feature	178288	178311	.	+	.	ID=id313;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ilvD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	179377	179412	.	+	.	ID=id314;Note=PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2.;gbkey=misc_feature;gene=ilvD;inference=protein motif:Prosite:PS00887
AM286415.1	EMBL	gene	179709	181253	.	+	.	ID=gene158;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=YE0152
AM286415.1	EMBL	CDS	179709	181253	.	+	0	ID=cds147;Parent=gene158;Dbxref=EnsemblGenomes-Gn:YE0152,EnsemblGenomes-Tr:CAL10292,GOA:A1JI54,InterPro:IPR000634,InterPro:IPR001721,InterPro:IPR001926,InterPro:IPR005787,UniProtKB/TrEMBL:A1JI54,NCBI_GP:CAL10292.1;Name=CAL10292.1;gbkey=CDS;gene=ilvA;product=threonine dehydratase;protein_id=CAL10292.1;transl_table=11
AM286415.1	EMBL	sequence_feature	179781	180659	.	+	.	ID=id315;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 318.7%2CE-value 4.4e-93;gbkey=misc_feature;gene=ilvA;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	sequence_feature	179865	179906	.	+	.	ID=id316;Note=PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=ilvA;inference=protein motif:Prosite:PS00165
AM286415.1	EMBL	sequence_feature	180693	180965	.	+	.	ID=id317;Note=Pfam match to entry PF00585 Thr_dehydrat_C%2CC-terminal regulatory domain of Threonine dehydratase %2Cscore 159.3%2C E-value 4.3e-45;gbkey=misc_feature;gene=ilvA;inference=protein motif:PFAM:PF00585
AM286415.1	EMBL	sequence_feature	180978	181244	.	+	.	ID=id318;Note=Pfam match to entry PF00585 Thr_dehydrat_C%2CC-terminal regulatory domain of Threonine dehydratase %2Cscore 151.2%2C E-value 1.2e-42;gbkey=misc_feature;gene=ilvA;inference=protein motif:PFAM:PF00585
AM286415.1	EMBL	gene	181439	182935	.	+	.	ID=gene159;Name=YE0153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0153
AM286415.1	EMBL	CDS	181439	182935	.	+	0	ID=cds148;Parent=gene159;Dbxref=EnsemblGenomes-Gn:YE0153,EnsemblGenomes-Tr:CAL10293,UniProtKB/TrEMBL:A1JI55,NCBI_GP:CAL10293.1;Name=CAL10293.1;Note=Similar in parts to many including: Plasmodium falciparum putative replication A protein Mal4p2.32 SWALL:Q9U0J0 (EMBL:AL035475) (1145 aa) fasta scores: E(): 0.55%2C 19.25 38d in 483 aa and Mycoplasma pulmonis hypothetical protein Mypu_4790 SWALL:Q98Q87 (EMBL:AL445564) (804 aa) fasta scores: E(): 2%2C 22.8 38d in 307 aa. Note the abundance of Asn residues in the predicted product of this CDS.;gbkey=CDS;inference=similar to sequence:INSDC:AL445564;product=putative membrane protein;protein_id=CAL10293.1;transl_table=11
AM286415.1	EMBL	sequence_feature	181457	181525	.	+	.	ID=id319;Note=1 probable transmembrane helix predicted for YE0153 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	182937	183818	.	-	.	ID=gene160;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=YE0154
AM286415.1	EMBL	CDS	182937	183818	.	-	0	ID=cds149;Parent=gene160;Dbxref=EnsemblGenomes-Gn:YE0154,EnsemblGenomes-Tr:CAL10294,GOA:A1JI56,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JI56,NCBI_GP:CAL10294.1;Name=CAL10294.1;gbkey=CDS;gene=ilvY;product=LysR-family transcriptional regulatory protein;protein_id=CAL10294.1;transl_table=11
AM286415.1	EMBL	sequence_feature	182940	183563	.	-	.	ID=id320;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 118.2%2C E-value 9.9e-33;gbkey=misc_feature;gene=ilvY;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	183633	183812	.	-	.	ID=id321;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 97.4%2C E-value 1.8e-26;gbkey=misc_feature;gene=ilvY;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	183678	183770	.	-	.	ID=id322;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=ilvY;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	183708	183773	.	-	.	ID=id323;Note=Predicted helix-turn-helix motif with score 1928.000%2C SD 5.75 at aa 16-37%2C sequence RHFGRSAKAMHVSPSTLSRQIQ;gbkey=misc_feature;gene=ilvY
AM286415.1	EMBL	gene	184071	185549	.	+	.	ID=gene161;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=YE0155
AM286415.1	EMBL	CDS	184071	185549	.	+	0	ID=cds150;Parent=gene161;Dbxref=EnsemblGenomes-Gn:YE0155,EnsemblGenomes-Tr:CAL10295,GOA:A1JI57,InterPro:IPR000506,InterPro:IPR008927,InterPro:IPR013023,InterPro:IPR013116,InterPro:IPR013328,InterPro:IPR014359,InterPro:IPR016040,NCBI_GP:CAL10295.1;Name=CAL10295.1;gbkey=CDS;gene=ilvC;product=ketol-acid reductoisomerase;protein_id=CAL10295.1;transl_table=11
AM286415.1	EMBL	sequence_feature	184698	185528	.	+	.	ID=id324;Note=Pfam match to entry PF01450 IlvC%2C Acetohydroxy acid isomeroreductase%2C catalytic domain%2C score 463.0%2C E-value 1.6e-136;gbkey=misc_feature;gene=ilvC;inference=protein motif:PFAM:PF01450
AM286415.1	EMBL	gene	185847	186524	.	-	.	ID=gene162;Name=YE0157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0157
AM286415.1	EMBL	CDS	185847	186524	.	-	0	ID=cds151;Parent=gene162;Dbxref=EnsemblGenomes-Gn:YE0157,EnsemblGenomes-Tr:CAL10296,GOA:A1JI58,InterPro:IPR001829,InterPro:IPR008962,InterPro:IPR016147,InterPro:IPR016148,InterPro:IPR018046,UniProtKB/TrEMBL:A1JI58,NCBI_GP:CAL10296.1;Name=CAL10296.1;gbkey=CDS;product=putative chaperone protein;protein_id=CAL10296.1;transl_table=11
AM286415.1	EMBL	sequence_feature	185859	186110	.	-	.	ID=id325;Note=Pfam match to entry PF02753 pili_assembly_C%2CGram-negative pili assembly chaperone%2C C-terminal domain %2Cscore 28.6%2C E-value 9.5e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF02753
AM286415.1	EMBL	sequence_feature	186120	186497	.	-	.	ID=id326;Note=Pfam match to entry PF00345 pili_assembly%2CGram-negative pili assembly chaperone%2C N-terminal domain %2Cscore 141.8%2C E-value 8.2e-40;gbkey=misc_feature;inference=protein motif:PFAM:PF00345
AM286415.1	EMBL	sequence_feature	186210	186263	.	-	.	ID=id327;Note=PS00635 Gram-negative pili assembly chaperone signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00635
AM286415.1	EMBL	gene	186571	187938	.	-	.	ID=gene163;Name=YE0158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0158
AM286415.1	EMBL	CDS	186571	187938	.	-	0	ID=cds152;Parent=gene163;Dbxref=EnsemblGenomes-Gn:YE0158,EnsemblGenomes-Tr:CAL10297,GOA:A1JI59,InterPro:IPR000259,InterPro:IPR008966,InterPro:IPR011228,UniProtKB/TrEMBL:A1JI59,NCBI_GP:CAL10297.1;Name=CAL10297.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10297.1;transl_table=11
AM286415.1	EMBL	sequence_feature	187801	187833	.	-	.	ID=id328;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	187956	190175	.	-	.	ID=gene164;Name=YE0159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0159
AM286415.1	EMBL	CDS	187956	190175	.	-	0	ID=cds153;Parent=gene164;Dbxref=EnsemblGenomes-Gn:YE0159,EnsemblGenomes-Tr:CAL10298,GOA:A1JI60,InterPro:IPR000015,InterPro:IPR018030,InterPro:IPR025885,InterPro:IPR025949,UniProtKB/TrEMBL:A1JI60,NCBI_GP:CAL10298.1;Name=CAL10298.1;gbkey=CDS;product=putative outer membrane usher protein;protein_id=CAL10298.1;transl_table=11
AM286415.1	EMBL	sequence_feature	188010	190172	.	-	.	ID=id329;Note=Pfam match to entry PF00577 Usher%2C Fimbrial Usher protein%2C score 734.3%2C E-value 3.4e-218;gbkey=misc_feature;inference=protein motif:PFAM:PF00577
AM286415.1	EMBL	sequence_feature	189582	189614	.	-	.	ID=id330;Note=PS01151 Fimbrial biogenesis outer membrane usher protein signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01151
AM286415.1	EMBL	gene	190653	191330	.	-	.	ID=gene165;Name=YE0160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0160
AM286415.1	EMBL	CDS	190653	191330	.	-	0	ID=cds154;Parent=gene165;Dbxref=EnsemblGenomes-Gn:YE0160,EnsemblGenomes-Tr:CAL10299,GOA:A1JI61,InterPro:IPR001829,InterPro:IPR008962,InterPro:IPR016147,InterPro:IPR016148,UniProtKB/TrEMBL:A1JI61,NCBI_GP:CAL10299.1;Name=CAL10299.1;gbkey=CDS;product=putative fimbrial chaperone;protein_id=CAL10299.1;transl_table=11
AM286415.1	EMBL	sequence_feature	190665	190928	.	-	.	ID=id331;Note=Pfam match to entry PF02753 pili_assembly_C%2CGram-negative pili assembly chaperone%2C C-terminal domain %2Cscore 33.8%2C E-value 2.6e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF02753
AM286415.1	EMBL	sequence_feature	190938	191306	.	-	.	ID=id332;Note=Pfam match to entry PF00345 pili_assembly%2CGram-negative pili assembly chaperone%2C N-terminal domain %2Cscore 179.4%2C E-value 3.7e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF00345
AM286415.1	EMBL	gene	191517	192047	.	-	.	ID=gene166;Name=YE0161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0161
AM286415.1	EMBL	CDS	191517	192047	.	-	0	ID=cds155;Parent=gene166;Dbxref=EnsemblGenomes-Gn:YE0161,EnsemblGenomes-Tr:CAL10300,GOA:A1JI62,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JI62,NCBI_GP:CAL10300.1;Name=CAL10300.1;gbkey=CDS;product=putative fimbrial protein;protein_id=CAL10300.1;transl_table=11
AM286415.1	EMBL	sequence_feature	191520	191978	.	-	.	ID=id333;Note=Pfam match to entry PF00419 Fimbrial%2C Fimbrial protein%2C score 26.4%2C E-value 3.4e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00419
AM286415.1	EMBL	gene	192664	192945	.	-	.	ID=gene167;Name=ppiC;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=YE0162
AM286415.1	EMBL	CDS	192664	192945	.	-	0	ID=cds156;Parent=gene167;Dbxref=EnsemblGenomes-Gn:YE0162,EnsemblGenomes-Tr:CAL10301,GOA:A1JI63,InterPro:IPR000297,UniProtKB/TrEMBL:A1JI63,NCBI_GP:CAL10301.1;Name=CAL10301.1;gbkey=CDS;gene=ppiC;product=peptidyl-prolyl cis-trans isomerase C;protein_id=CAL10301.1;transl_table=11
AM286415.1	EMBL	sequence_feature	192673	192942	.	-	.	ID=id334;Note=Pfam match to entry PF00639 Rotamase%2C PPIC-type PPIASE domain%2C score 132.4%2C E-value 5.3e-37;gbkey=misc_feature;gene=ppiC;inference=protein motif:PFAM:PF00639
AM286415.1	EMBL	gene	193159	195183	.	+	.	ID=gene168;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=YE0163
AM286415.1	EMBL	CDS	193159	195183	.	+	0	ID=cds157;Parent=gene168;Dbxref=EnsemblGenomes-Gn:YE0163,EnsemblGenomes-Tr:CAL10302,GOA:A1JI64,InterPro:IPR000212,InterPro:IPR005752,InterPro:IPR013986,InterPro:IPR014016,InterPro:IPR014017,InterPro:IPR027417,UniProtKB/TrEMBL:A1JI64,NCBI_GP:CAL10302.1;Name=CAL10302.1;gbkey=CDS;gene=rep;product=ATP-dependent DNA helicase Rep;protein_id=CAL10302.1;transl_table=11
AM286415.1	EMBL	sequence_feature	193165	194610	.	+	.	ID=id335;Note=Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase%2C score 718.8%2C E-value 1.6e-213;gbkey=misc_feature;gene=rep;inference=protein motif:PFAM:PF00580
AM286415.1	EMBL	sequence_feature	193222	193245	.	+	.	ID=id336;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=rep;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	195239	197065	.	-	.	ID=gene169;Name=pehX;gbkey=Gene;gene=pehX;gene_biotype=protein_coding;locus_tag=YE0164
AM286415.1	EMBL	CDS	195239	197065	.	-	0	ID=cds158;Parent=gene169;Dbxref=EnsemblGenomes-Gn:YE0164,EnsemblGenomes-Tr:CAL10303,GOA:A1JI65,InterPro:IPR000743,InterPro:IPR003961,InterPro:IPR011050,InterPro:IPR012334,InterPro:IPR013783,UniProtKB/TrEMBL:A1JI65,NCBI_GP:CAL10303.1;Name=CAL10303.1;Note=Highly similar to the plant pathogenic Erwinia chrysanthemi exo-poly-alpha-D-galacturonosidase PehX SWALL:PEHX_ERWCH (SWALL:P15922) (602 aa) fasta scores: E(): 3.6e-145%2C 61.23 38d in 601 aa. This CDS was previously sequenced as: Yersinia enterocolitica exopolygalacturonase SWALL:O68975 (EMBL:AF059505) (601 aa) fasta scores: E(): 0%2C 98.83 38d in 600 aa;gbkey=CDS;gene=pehX;inference=similar to sequence:UniProtKB:P15922;product=exo-poly-alpha-D-galacturonosidase precursor;protein_id=CAL10303.1;transl_table=11
AM286415.1	EMBL	sequence_feature	195356	196519	.	-	.	ID=id337;Note=Pfam match to entry PF00295 Glyco_hydro_28%2CPolygalacturonase (pectinase)%2C score -27.9%2C E-value 7.2e-09;gbkey=misc_feature;gene=pehX;inference=protein motif:PFAM:PF00295
AM286415.1	EMBL	sequence_feature	196556	196579	.	-	.	ID=id338;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=pehX;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	196637	196963	.	-	.	ID=id339;Note=Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C score 28.4%2C E-value 1.1e-05;gbkey=misc_feature;gene=pehX;inference=protein motif:PFAM:PF00041
AM286415.1	EMBL	sequence_feature	196979	197032	.	-	.	ID=id340;Note=1 probable transmembrane helix predicted for YE0164 by TMHMM2.0 at aa 12-29;gbkey=misc_feature;gene=pehX;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	197407	198903	.	-	.	ID=gene170;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=YE0165
AM286415.1	EMBL	CDS	197407	198903	.	-	0	ID=cds159;Parent=gene170;Dbxref=EnsemblGenomes-Gn:YE0165,EnsemblGenomes-Tr:CAL10304,GOA:A1JI66,InterPro:IPR003695,InterPro:IPR022371,InterPro:IPR023709,NCBI_GP:CAL10304.1;Name=CAL10304.1;gbkey=CDS;gene=gppA;product=guanosine-5'-triphosphate%2C3'-diphosphate pyrophosphatase;protein_id=CAL10304.1;transl_table=11
AM286415.1	EMBL	sequence_feature	197992	198840	.	-	.	ID=id341;Note=Pfam match to entry PF02541 Ppx-GppA%2C Ppx/GppA phosphatase family%2C score 427.6%2C E-value 7.2e-126;gbkey=misc_feature;gene=gppA;inference=protein motif:PFAM:PF02541
AM286415.1	EMBL	gene	198907	199983	.	-	.	ID=gene171;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;gene_synonym=mmrA;locus_tag=YE0166
AM286415.1	EMBL	CDS	198907	199983	.	-	0	ID=cds160;Parent=gene171;Dbxref=EnsemblGenomes-Gn:YE0166,EnsemblGenomes-Tr:CAL10305,GOA:A1JI67,InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR027417,UniProtKB/TrEMBL:A1JI67,NCBI_GP:CAL10305.1;Name=CAL10305.1;gbkey=CDS;gene=rhlB;product=putative DEAD-box helicase;protein_id=CAL10305.1;transl_table=11
AM286415.1	EMBL	sequence_feature	199141	199356	.	-	.	ID=id342;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 116.3%2C E-value 3.7e-32;gbkey=misc_feature;gene=rhlB;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	199492	199983	.	-	.	ID=id343;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 94.6%2C E-value 1.3e-25;gbkey=misc_feature;gene=rhlB;inference=protein motif:PFAM:PF00270
AM286415.1	EMBL	sequence_feature	199681	199707	.	-	.	ID=id344;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;gbkey=misc_feature;gene=rhlB;inference=protein motif:Prosite:PS00039
AM286415.1	EMBL	gene	200312	200638	.	+	.	ID=gene172;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;gene_synonym=fipA,tsnC;locus_tag=YE0167
AM286415.1	EMBL	CDS	200312	200638	.	+	0	ID=cds161;Parent=gene172;Dbxref=EnsemblGenomes-Gn:YE0167,EnsemblGenomes-Tr:CAL10306,GOA:A1JI68,InterPro:IPR005746,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017937,UniProtKB/TrEMBL:A1JI68,NCBI_GP:CAL10306.1;Name=CAL10306.1;gbkey=CDS;gene=trxA;product=thioredoxin 1;protein_id=CAL10306.1;transl_table=11
AM286415.1	EMBL	sequence_feature	200315	200635	.	+	.	ID=id345;Note=Pfam match to entry PF00085 thiored%2C Thioredoxin %2Cscore 168.2%2C E-value 8.7e-48;gbkey=misc_feature;gene=trxA;inference=protein motif:PFAM:PF00085
AM286415.1	EMBL	sequence_feature	200384	200440	.	+	.	ID=id346;Note=PS00194 Thioredoxin family active site.;gbkey=misc_feature;gene=trxA;inference=protein motif:Prosite:PS00194
AM286415.1	EMBL	gene	201295	202554	.	+	.	ID=gene173;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;gene_synonym=nitA,psuA,rnsC,sbaA,tsu;locus_tag=YE0168
AM286415.1	EMBL	CDS	201295	202554	.	+	0	ID=cds162;Parent=gene173;Dbxref=EnsemblGenomes-Gn:YE0168,EnsemblGenomes-Tr:CAL10307,GOA:A1JI69,InterPro:IPR000194,InterPro:IPR003593,InterPro:IPR004665,InterPro:IPR011112,InterPro:IPR011113,InterPro:IPR011129,InterPro:IPR012340,InterPro:IPR027417,UniProtKB/TrEMBL:A1JI69,NCBI_GP:CAL10307.1;Name=CAL10307.1;gbkey=CDS;gene=rho;product=transcription termination factor;protein_id=CAL10307.1;transl_table=11
AM286415.1	EMBL	sequence_feature	201523	202407	.	+	.	ID=id347;Note=Pfam match to entry PF00006 ATP-synt_ab%2C ATP synthase alpha/beta family%2C nucleotide-binding domain %2Cscore 290.0%2C E-value 1.9e-84;gbkey=misc_feature;gene=rho;inference=protein motif:PFAM:PF00006
AM286415.1	EMBL	sequence_feature	201724	201798	.	+	.	ID=id348;Note=PS00464 Ribosomal protein L22 signature.;gbkey=misc_feature;gene=rho;inference=protein motif:Prosite:PS00464
AM286415.1	EMBL	sequence_feature	201826	201849	.	+	.	ID=id349;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=rho;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	202836	203933	.	+	.	ID=gene174;Name=rfe;gbkey=Gene;gene=rfe;gene_biotype=protein_coding;gene_synonym=b3784;locus_tag=YE0169
AM286415.1	EMBL	CDS	202836	203933	.	+	0	ID=cds163;Parent=gene174;Dbxref=EnsemblGenomes-Gn:YE0169,EnsemblGenomes-Tr:CAL10308,GOA:A1JI70,InterPro:IPR000715,InterPro:IPR012750,UniProtKB/TrEMBL:A1JI70,NCBI_GP:CAL10308.1;Name=CAL10308.1;gbkey=CDS;gene=rfe;product=putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase;protein_id=CAL10308.1;transl_table=11
AM286415.1	EMBL	sequence_feature	202848	202907	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	202968	203036	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	203049	203102	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	203139	203198	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	203226	203294	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	203313	203372	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	203385	203453	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	203472	203540	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	203568	203624	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	203715	203768	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	203796	203849	.	+	.	ID=id350;Note=11 probable transmembrane helices predicted for YE0169 by TMHMM2.0 at aa 5-24%2C 45-67%2C 72-89%2C 102-121%2C131-153%2C 160-179%2C 184-206%2C 213-235%2C 245-263%2C 294-311 and 321-338;gbkey=misc_feature;gene=rfe;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	203052	203543	.	+	.	ID=id351;Note=Pfam match to entry PF00953 Glycos_transf_4%2CGlycosyl transferase%2C score 20.2%2C E-value 9.7e-08;gbkey=misc_feature;gene=rfe;inference=protein motif:PFAM:PF00953
AM286415.1	EMBL	gene	203969	205030	.	+	.	ID=gene175;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;gene_synonym=b3785,wzz;locus_tag=YE0170
AM286415.1	EMBL	CDS	203969	205030	.	+	0	ID=cds164;Parent=gene175;Dbxref=EnsemblGenomes-Gn:YE0170,EnsemblGenomes-Tr:CAL10309,GOA:A1JI71,InterPro:IPR003856,UniProtKB/TrEMBL:A1JI71,NCBI_GP:CAL10309.1;Name=CAL10309.1;gbkey=CDS;gene=wzzE;product=putative lipopolysaccharide biosynthesis protein;protein_id=CAL10309.1;transl_table=11
AM286415.1	EMBL	sequence_feature	204017	204520	.	+	.	ID=id352;Note=Pfam match to entry PF02706 wzz%2C Chain length determinant protein%2C score 45.5%2C E-value 7.8e-11;gbkey=misc_feature;gene=wzzE;inference=protein motif:PFAM:PF02706
AM286415.1	EMBL	sequence_feature	204059	204127	.	+	.	ID=id353;Note=2 probable transmembrane helices predicted for YE0170 by TMHMM2.0 at aa 31-53 and 327-346;gbkey=misc_feature;gene=wzzE;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	204947	205006	.	+	.	ID=id353;Note=2 probable transmembrane helices predicted for YE0170 by TMHMM2.0 at aa 31-53 and 327-346;gbkey=misc_feature;gene=wzzE;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	205110	206240	.	+	.	ID=gene176;Name=rffE;gbkey=Gene;gene=rffE;gene_biotype=protein_coding;gene_synonym=nfrC,wecB;locus_tag=YE0171
AM286415.1	EMBL	CDS	205110	206240	.	+	0	ID=cds165;Parent=gene176;Dbxref=EnsemblGenomes-Gn:YE0171,EnsemblGenomes-Tr:CAL10310,GOA:A1JI72,InterPro:IPR003331,InterPro:IPR029767,UniProtKB/TrEMBL:A1JI72,NCBI_GP:CAL10310.1;Name=CAL10310.1;gbkey=CDS;gene=rffE;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=CAL10310.1;transl_table=11
AM286415.1	EMBL	sequence_feature	205233	206219	.	+	.	ID=id354;Note=Pfam match to entry PF02350 Epimerase_2%2CUDP-N-acetylglucosamine 2-epimerase%2C score 723.5%2C E-value 6e-215;gbkey=misc_feature;gene=rffE;inference=protein motif:PFAM:PF02350
AM286415.1	EMBL	gene	206237	207499	.	+	.	ID=gene177;Name=rffD;gbkey=Gene;gene=rffD;gene_biotype=protein_coding;gene_synonym=b3787,wecC;locus_tag=YE0172
AM286415.1	EMBL	CDS	206237	207499	.	+	0	ID=cds166;Parent=gene177;Dbxref=EnsemblGenomes-Gn:YE0172,EnsemblGenomes-Tr:CAL10311,GOA:A1JI73,InterPro:IPR001732,InterPro:IPR008927,InterPro:IPR014026,InterPro:IPR014027,InterPro:IPR016040,InterPro:IPR017476,InterPro:IPR028359,UniProtKB/TrEMBL:A1JI73,NCBI_GP:CAL10311.1;Name=CAL10311.1;gbkey=CDS;gene=rffD;product=putative UDP-glucose/GDP-mannose dehydrogenase;protein_id=CAL10311.1;transl_table=11
AM286415.1	EMBL	sequence_feature	206246	206827	.	+	.	ID=id355;Note=Pfam match to entry PF03721 UDPG_MGDP_dh_N%2CUDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain%2C score 299.1%2C E-value 3.6e-87;gbkey=misc_feature;gene=rffD;inference=protein motif:PFAM:PF03721
AM286415.1	EMBL	sequence_feature	206849	207127	.	+	.	ID=id356;Note=Pfam match to entry PF00984 UDPG_MGDP_dh%2CUDP-glucose/GDP-mannose dehydrogenase family%2C central domain%2C score 153.9%2C E-value 1.9e-43;gbkey=misc_feature;gene=rffD;inference=protein motif:PFAM:PF00984
AM286415.1	EMBL	sequence_feature	207206	207481	.	+	.	ID=id357;Note=Pfam match to entry PF03720 UDPG_MGDP_dh_C%2CUDP-glucose/GDP-mannose dehydrogenase family%2C UDP binding domain%2C score 91.3%2C E-value 1.2e-24;gbkey=misc_feature;gene=rffD;inference=protein motif:PFAM:PF03720
AM286415.1	EMBL	gene	207496	208563	.	+	.	ID=gene178;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=YE0173
AM286415.1	EMBL	CDS	207496	208563	.	+	0	ID=cds167;Parent=gene178;Dbxref=EnsemblGenomes-Gn:YE0173,EnsemblGenomes-Tr:CAL10312,GOA:A1JI74,InterPro:IPR001509,InterPro:IPR005888,InterPro:IPR016040,UniProtKB/TrEMBL:A1JI74,NCBI_GP:CAL10312.1;Name=CAL10312.1;gbkey=CDS;gene=rffG;product=dTDP-D-glucose-4%2C6-dehydratase;protein_id=CAL10312.1;transl_table=11
AM286415.1	EMBL	sequence_feature	207505	208500	.	+	.	ID=id358;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 720.1%2CE-value 6.4e-214;gbkey=misc_feature;gene=rffG;inference=protein motif:PFAM:PF01370
AM286415.1	EMBL	gene	208794	209675	.	+	.	ID=gene179;Name=rffH;gbkey=Gene;gene=rffH;gene_biotype=protein_coding;locus_tag=YE0174
AM286415.1	EMBL	CDS	208794	209675	.	+	0	ID=cds168;Parent=gene179;Dbxref=EnsemblGenomes-Gn:YE0174,EnsemblGenomes-Tr:CAL10313,GOA:A1JI75,InterPro:IPR005835,InterPro:IPR005907,InterPro:IPR029044,UniProtKB/TrEMBL:A1JI75,NCBI_GP:CAL10313.1;Name=CAL10313.1;gbkey=CDS;gene=rffH;product=glucose-1-phosphate thymidylyltransferase;protein_id=CAL10313.1;transl_table=11
AM286415.1	EMBL	sequence_feature	208797	209513	.	+	.	ID=id359;Note=Pfam match to entry PF00483 NTP_transferase%2CNucleotidyl transferase%2C score 390.3%2C E-value 1.2e-114;gbkey=misc_feature;gene=rffH;inference=protein motif:PFAM:PF00483
AM286415.1	EMBL	gene	209764	210390	.	+	.	ID=gene180;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=b3790,wecD;locus_tag=YE0175
AM286415.1	EMBL	CDS	209764	210390	.	+	0	ID=cds169;Parent=gene180;Dbxref=EnsemblGenomes-Gn:YE0175,EnsemblGenomes-Tr:CAL10314,GOA:A1JI76,InterPro:IPR000182,InterPro:IPR012752,InterPro:IPR016181,UniProtKB/TrEMBL:A1JI76,NCBI_GP:CAL10314.1;Name=CAL10314.1;gbkey=CDS;gene=rffC;product=putative lipopolysaccharide biosynthesis protein;protein_id=CAL10314.1;transl_table=11
AM286415.1	EMBL	sequence_feature	210115	210354	.	+	.	ID=id360;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 73.5%2C E-value 2.9e-19;gbkey=misc_feature;gene=rffC;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	210392	211522	.	+	.	ID=gene181;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=b3791,wecE;locus_tag=YE0176
AM286415.1	EMBL	CDS	210392	211522	.	+	0	ID=cds170;Parent=gene181;Dbxref=EnsemblGenomes-Gn:YE0176,EnsemblGenomes-Tr:CAL10315,GOA:A1JI77,InterPro:IPR000653,InterPro:IPR012749,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JI77,NCBI_GP:CAL10315.1;Name=CAL10315.1;gbkey=CDS;gene=rffA;product=putative lipopolysaccharide biosynthesis protein;protein_id=CAL10315.1;transl_table=11
AM286415.1	EMBL	sequence_feature	210410	211507	.	+	.	ID=id361;Note=Pfam match to entry PF01041 DegT_DnrJ_EryC1%2CDegT/DnrJ/EryC1/StrS aminotransferase family%2C score 291.1%2C E-value 9.2e-85;gbkey=misc_feature;gene=rffA;inference=protein motif:PFAM:PF01041
AM286415.1	EMBL	sequence_feature	210758	210790	.	+	.	ID=id362;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=rffA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	211524	212780	.	+	.	ID=gene182;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;gene_synonym=b3792,wzx;locus_tag=YE0177
AM286415.1	EMBL	CDS	211524	212780	.	+	0	ID=cds171;Parent=gene182;Dbxref=EnsemblGenomes-Gn:YE0177,EnsemblGenomes-Tr:CAL10316,GOA:A1JI78,InterPro:IPR002797,UniProtKB/TrEMBL:A1JI78,NCBI_GP:CAL10316.1;Name=CAL10316.1;gbkey=CDS;gene=wzxE;product=putative lipopolysaccharide biosynthesis protein;protein_id=CAL10316.1;transl_table=11
AM286415.1	EMBL	sequence_feature	211530	212375	.	+	.	ID=id363;Note=Pfam match to entry PF01943 Polysacc_synt%2CPolysaccharide biosynthesis protein%2C score 36.7%2C E-value 3.4e-08;gbkey=misc_feature;gene=wzxE;inference=protein motif:PFAM:PF01943
AM286415.1	EMBL	sequence_feature	211560	211628	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	211656	211724	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	211761	211829	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	211872	211940	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	211959	212027	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	212040	212108	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	212169	212237	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	212280	212348	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	212409	212477	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	212520	212588	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	212607	212675	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	212685	212753	.	+	.	ID=id364;Note=12 probable transmembrane helices predicted for YE0177 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-102%2C 117-139%2C146-168%2C 173-195%2C 216-238%2C 253-275%2C 296-318%2C 333-355%2C362-384 and 388-410;gbkey=misc_feature;gene=wzxE;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	212712	212744	.	+	.	ID=id365;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=wzxE;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	212803	213888	.	+	.	ID=gene183;Name=YE0178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0178
AM286415.1	EMBL	CDS	212803	213888	.	+	0	ID=cds172;Parent=gene183;Dbxref=EnsemblGenomes-Gn:YE0178,EnsemblGenomes-Tr:CAL10317,GOA:A1JI79,InterPro:IPR009993,NCBI_GP:CAL10317.1;Name=CAL10317.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10317.1;transl_table=11
AM286415.1	EMBL	gene	213885	215261	.	+	.	ID=gene184;Name=wecF;gbkey=Gene;gene=wecF;gene_biotype=protein_coding;gene_synonym=rffT;locus_tag=YE0179
AM286415.1	EMBL	CDS	213885	215261	.	+	0	ID=cds173;Parent=gene184;Dbxref=EnsemblGenomes-Gn:YE0179,EnsemblGenomes-Tr:CAL10318,GOA:A1JI80,InterPro:IPR010691,UniProtKB/TrEMBL:A1JI80,NCBI_GP:CAL10318.1;Name=CAL10318.1;gbkey=CDS;gene=wecF;product=probable 4-alpha-L-fucosyltransferase;protein_id=CAL10318.1;transl_table=11
AM286415.1	EMBL	sequence_feature	213900	213959	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	213996	214064	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	214092	214151	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	214212	214280	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	214338	214406	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	214425	214484	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	214494	214553	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	214557	214616	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	214893	214961	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	215022	215075	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	215103	215171	.	+	.	ID=id366;Note=11 probable transmembrane helices predicted for YE0179 by TMHMM2.0 at aa 6-25%2C 38-60%2C 70-89%2C 110-132%2C152-174%2C 181-200%2C 204-223%2C 225-244%2C 337-359%2C 380-397 and 407-429;gbkey=misc_feature;gene=wecF;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	214716	214763	.	+	.	ID=id367;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;gene=wecF;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	sequence_feature	215106	215138	.	+	.	ID=id368;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=wecF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	215354	216028	.	+	.	ID=gene185;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;gene_synonym=rffM;locus_tag=YE0180
AM286415.1	EMBL	CDS	215354	216028	.	+	0	ID=cds174;Parent=gene185;Dbxref=EnsemblGenomes-Gn:YE0180,EnsemblGenomes-Tr:CAL10319,GOA:A1JI81,InterPro:IPR004629,UniProtKB/TrEMBL:A1JI81,NCBI_GP:CAL10319.1;Name=CAL10319.1;gbkey=CDS;gene=wecG;product=probable UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=CAL10319.1;transl_table=11
AM286415.1	EMBL	sequence_feature	215465	215980	.	+	.	ID=id369;Note=Pfam match to entry PF03808 Glyco_tran_WecB%2CGlycosyl transferase WecB/TagA/CpsF family%2C score 292.2%2CE-value 4.2e-85;gbkey=misc_feature;gene=wecG;inference=protein motif:PFAM:PF03808
AM286415.1	EMBL	gene	216379	217770	.	+	.	ID=gene186;Name=YE0181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0181
AM286415.1	EMBL	CDS	216379	217770	.	+	0	ID=cds175;Parent=gene186;Dbxref=EnsemblGenomes-Gn:YE0181,EnsemblGenomes-Tr:CAL10320,GOA:A1JI82,InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB/TrEMBL:A1JI82,NCBI_GP:CAL10320.1;Name=CAL10320.1;gbkey=CDS;product=putative permease protein;protein_id=CAL10320.1;transl_table=11
AM286415.1	EMBL	sequence_feature	216406	217737	.	+	.	ID=id370;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 500.3%2C E-value 9.3e-148;gbkey=misc_feature;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	216439	216492	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	216502	216561	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	216661	216729	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	216757	216825	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	216844	216912	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	216955	217023	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	217099	217167	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	217195	217263	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	217375	217443	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	217456	217524	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	217585	217653	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	217663	217731	.	+	.	ID=id371;Note=12 probable transmembrane helices predicted for YE0181 by TMHMM2.0 at aa 21-38%2C 42-61%2C 95-117%2C 127-149%2C156-178%2C 193-215%2C 241-263%2C 273-295%2C 333-355%2C 360-382%2C403-425 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	216505	216597	.	+	.	ID=id372;Note=PS00218 Amino acid permeases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00218
AM286415.1	EMBL	sequence_feature	217249	217281	.	+	.	ID=id373;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	217684	217716	.	+	.	ID=id374;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	217919	217995	.	+	.	ID=gene187;Name=tRNA-Arg (CCG);gbkey=Gene;gene=tRNA-Arg (CCG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	217919	217995	.	+	.	ID=rna14;Parent=gene187;gbkey=tRNA;gene=tRNA-Arg (CCG);product=tRNA-Arg
AM286415.1	EMBL	exon	217919	217995	.	+	.	ID=id375;Parent=rna14;gbkey=tRNA;gene=tRNA-Arg (CCG);product=tRNA-Arg
AM286415.1	EMBL	gene	218079	218154	.	+	.	ID=gene188;Name=tRNA-His (GTG);gbkey=Gene;gene=tRNA-His (GTG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	218079	218154	.	+	.	ID=rna15;Parent=gene188;gbkey=tRNA;gene=tRNA-His (GTG);product=tRNA-His
AM286415.1	EMBL	exon	218079	218154	.	+	.	ID=id376;Parent=rna15;gbkey=tRNA;gene=tRNA-His (GTG);product=tRNA-His
AM286415.1	EMBL	gene	218170	218256	.	+	.	ID=gene189;Name=tRNA-Leu (CAG);gbkey=Gene;gene=tRNA-Leu (CAG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	218170	218256	.	+	.	ID=rna16;Parent=gene189;gbkey=tRNA;gene=tRNA-Leu (CAG);product=tRNA-Leu
AM286415.1	EMBL	exon	218170	218256	.	+	.	ID=id377;Parent=rna16;gbkey=tRNA;gene=tRNA-Leu (CAG);product=tRNA-Leu
AM286415.1	EMBL	gene	218332	218408	.	+	.	ID=gene190;Name=tRNA-Pro (TGG);gbkey=Gene;gene=tRNA-Pro (TGG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	218332	218408	.	+	.	ID=rna17;Parent=gene190;gbkey=tRNA;gene=tRNA-Pro (TGG);product=tRNA-Pro
AM286415.1	EMBL	exon	218332	218408	.	+	.	ID=id378;Parent=rna17;gbkey=tRNA;gene=tRNA-Pro (TGG);product=tRNA-Pro
AM286415.1	EMBL	gene	219361	220560	.	-	.	ID=gene191;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=YE0184
AM286415.1	EMBL	CDS	219361	220560	.	-	0	ID=cds176;Parent=gene191;Dbxref=EnsemblGenomes-Gn:YE0184,EnsemblGenomes-Tr:CAL10321,GOA:A1JI83,InterPro:IPR005254,InterPro:IPR010817,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,UniProtKB/TrEMBL:A1JI83,NCBI_GP:CAL10321.1;Name=CAL10321.1;gbkey=CDS;gene=hemY;product=putative protoheme IX biogenesis protein;protein_id=CAL10321.1;transl_table=11
AM286415.1	EMBL	sequence_feature	220072	220101	.	-	.	ID=id379;Note=PS00215 Mitochondrial energy transfer proteins signature.;gbkey=misc_feature;gene=hemY;inference=protein motif:Prosite:PS00215
AM286415.1	EMBL	sequence_feature	220480	220548	.	-	.	ID=id380;Note=2 probable transmembrane helices predicted for YE0184 by TMHMM2.0 at aa 5-27 and 40-62;gbkey=misc_feature;gene=hemY;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	220375	220443	.	-	.	ID=id380;Note=2 probable transmembrane helices predicted for YE0184 by TMHMM2.0 at aa 5-27 and 40-62;gbkey=misc_feature;gene=hemY;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	220563	221687	.	-	.	ID=gene192;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=YE0185
AM286415.1	EMBL	CDS	220563	221687	.	-	0	ID=cds177;Parent=gene192;Dbxref=EnsemblGenomes-Gn:YE0185,EnsemblGenomes-Tr:CAL10322,GOA:A1JI84,InterPro:IPR007470,UniProtKB/TrEMBL:A1JI84,NCBI_GP:CAL10322.1;Name=CAL10322.1;gbkey=CDS;gene=hemX;product=putative uroporphyrin-III C-methyltransferase;protein_id=CAL10322.1;transl_table=11
AM286415.1	EMBL	sequence_feature	221517	221585	.	-	.	ID=id381;Note=1 probable transmembrane helix predicted for YE0185 by TMHMM2.0 at aa 35-57;gbkey=misc_feature;gene=hemX;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	221720	222466	.	-	.	ID=gene193;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=YE0186
AM286415.1	EMBL	CDS	221720	222466	.	-	0	ID=cds178;Parent=gene193;Dbxref=EnsemblGenomes-Gn:YE0186,EnsemblGenomes-Tr:CAL10323,GOA:A1JI85,InterPro:IPR003754,UniProtKB/TrEMBL:A1JI85,NCBI_GP:CAL10323.1;Name=CAL10323.1;gbkey=CDS;gene=hemD;product=uroporphyrinogen-III synthase;protein_id=CAL10323.1;transl_table=11
AM286415.1	EMBL	sequence_feature	221735	222439	.	-	.	ID=id382;Note=Pfam match to entry PF02602 HEM4%2CUroporphyrinogen-III synthase HemD%2C score 165.6%2C E-value 5.5e-47;gbkey=misc_feature;gene=hemD;inference=protein motif:PFAM:PF02602
AM286415.1	EMBL	gene	222463	223404	.	-	.	ID=gene194;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;gene_synonym=popE;locus_tag=YE0187
AM286415.1	EMBL	CDS	222463	223404	.	-	0	ID=cds179;Parent=gene194;Dbxref=EnsemblGenomes-Gn:YE0187,EnsemblGenomes-Tr:CAL10324,GOA:A1JI86,InterPro:IPR000860,InterPro:IPR022417,InterPro:IPR022418,InterPro:IPR022419,NCBI_GP:CAL10324.1;Name=CAL10324.1;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=CAL10324.1;transl_table=11
AM286415.1	EMBL	sequence_feature	222511	222732	.	-	.	ID=id383;Note=Pfam match to entry PF03900 Porphobil_deamC%2CPorphobilinogen deaminase%2C C-terminal domain%2C score 117.1%2C E-value 2.1e-32;gbkey=misc_feature;gene=hemC;inference=protein motif:PFAM:PF03900
AM286415.1	EMBL	sequence_feature	222664	222714	.	-	.	ID=id384;Note=PS00533 Porphobilinogen deaminase cofactor-binding site.;gbkey=misc_feature;gene=hemC;inference=protein motif:Prosite:PS00533
AM286415.1	EMBL	sequence_feature	222754	223392	.	-	.	ID=id385;Note=Pfam match to entry PF01379 Porphobil_deam%2CPorphobilinogen deaminase%2C dipyromethane cofactor binding domain%2C score 471.6%2C E-value 4.3e-139;gbkey=misc_feature;gene=hemC;inference=protein motif:PFAM:PF01379
AM286415.1	EMBL	gene	223809	226355	.	+	.	ID=gene195;Name=cyaA;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;gene_synonym=cya;locus_tag=YE0189
AM286415.1	EMBL	CDS	223809	226355	.	+	0	ID=cds180;Parent=gene195;Dbxref=EnsemblGenomes-Gn:YE0189,EnsemblGenomes-Tr:CAL10325,GOA:A1JI87,InterPro:IPR000274,InterPro:IPR024685,InterPro:IPR024686,UniProtKB/TrEMBL:A1JI87,NCBI_GP:CAL10325.1;Name=CAL10325.1;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=CAL10325.1;transl_table=11
AM286415.1	EMBL	sequence_feature	223809	226298	.	+	.	ID=id386;Note=Pfam match to entry PF01295 Adenylate_cycla%2CAdenylate cyclase%2C class-I%2C score 2160.8%2C E-value 0;gbkey=misc_feature;gene=cyaA;inference=protein motif:PFAM:PF01295
AM286415.1	EMBL	sequence_feature	224085	224102	.	+	.	ID=id387;Note=PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide.;gbkey=misc_feature;gene=cyaA;inference=protein motif:Prosite:PS00343
AM286415.1	EMBL	sequence_feature	224532	224567	.	+	.	ID=id388;Note=PS01092 Adenylate cyclases class-I signature 1.;gbkey=misc_feature;gene=cyaA;inference=protein motif:Prosite:PS01092
AM286415.1	EMBL	sequence_feature	225600	225644	.	+	.	ID=id389;Note=PS01093 Adenylate cyclases class-I signature 2.;gbkey=misc_feature;gene=cyaA;inference=protein motif:Prosite:PS01093
AM286415.1	EMBL	gene	226526	226846	.	-	.	ID=gene196;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=YE0190
AM286415.1	EMBL	CDS	226526	226846	.	-	0	ID=cds181;Parent=gene196;Dbxref=EnsemblGenomes-Gn:YE0190,EnsemblGenomes-Tr:CAL10326,GOA:A1JI88,InterPro:IPR002908,InterPro:IPR020895,NCBI_GP:CAL10326.1;Name=CAL10326.1;gbkey=CDS;gene=cyaY;product=frataxin-like protein;protein_id=CAL10326.1;transl_table=11
AM286415.1	EMBL	sequence_feature	226529	226846	.	-	.	ID=id390;Note=Pfam match to entry PF01491 Frataxin_Cyay%2CFrataxin-like domain%2C score 242.5%2C E-value 3.8e-70;gbkey=misc_feature;gene=cyaY;inference=protein motif:PFAM:PF01491
AM286415.1	EMBL	gene	226960	227163	.	+	.	ID=gene197;Name=YE0191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0191
AM286415.1	EMBL	CDS	226960	227163	.	+	0	ID=cds182;Parent=gene197;Dbxref=EnsemblGenomes-Gn:YE0191,EnsemblGenomes-Tr:CAL10327,UniProtKB/TrEMBL:A1JI89,NCBI_GP:CAL10327.1;Name=CAL10327.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL10327.1;transl_table=11
AM286415.1	EMBL	sequence_feature	226972	227040	.	+	.	ID=id391;Note=1 probable transmembrane helix predicted for YE0191 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	226987	227019	.	+	.	ID=id392;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	227252	228076	.	+	.	ID=gene198;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=YE0192
AM286415.1	EMBL	CDS	227252	228076	.	+	0	ID=cds183;Parent=gene198;Dbxref=EnsemblGenomes-Gn:YE0192,EnsemblGenomes-Tr:CAL10328,GOA:A1JI90,InterPro:IPR001653,InterPro:IPR018510,NCBI_GP:CAL10328.1;Name=CAL10328.1;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=CAL10328.1;transl_table=11
AM286415.1	EMBL	sequence_feature	227258	227623	.	+	.	ID=id393;Note=Pfam match to entry PF01678 DAP_epimerase%2CDiaminopimelate epimerase%2C score 179.5%2C E-value 3.5e-51;gbkey=misc_feature;gene=dapF;inference=protein motif:PFAM:PF01678
AM286415.1	EMBL	sequence_feature	227441	227485	.	+	.	ID=id394;Note=PS01326 Diaminopimelate epimerase signature.;gbkey=misc_feature;gene=dapF;inference=protein motif:Prosite:PS01326
AM286415.1	EMBL	sequence_feature	227702	228052	.	+	.	ID=id395;Note=Pfam match to entry PF01678 DAP_epimerase%2CDiaminopimelate epimerase%2C score 182.3%2C E-value 5.2e-52;gbkey=misc_feature;gene=dapF;inference=protein motif:PFAM:PF01678
AM286415.1	EMBL	gene	228170	228874	.	+	.	ID=gene199;Name=YE0193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0193
AM286415.1	EMBL	CDS	228170	228874	.	+	0	ID=cds184;Parent=gene199;Dbxref=EnsemblGenomes-Gn:YE0193,EnsemblGenomes-Tr:CAL10329,InterPro:IPR007435,UniProtKB/TrEMBL:A1JI91,NCBI_GP:CAL10329.1;Name=CAL10329.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10329.1;transl_table=11
AM286415.1	EMBL	gene	228871	229782	.	+	.	ID=gene200;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=YE0194
AM286415.1	EMBL	CDS	228871	229782	.	+	0	ID=cds185;Parent=gene200;Dbxref=EnsemblGenomes-Gn:YE0194,EnsemblGenomes-Tr:CAL10330,GOA:A1JI92,InterPro:IPR002104,InterPro:IPR004107,InterPro:IPR010998,InterPro:IPR011010,InterPro:IPR011931,InterPro:IPR013762,InterPro:IPR023009,InterPro:IPR023109,UniProtKB/TrEMBL:A1JI92,NCBI_GP:CAL10330.1;Name=CAL10330.1;gbkey=CDS;gene=xerC;product=putative integrase/recombinase;protein_id=CAL10330.1;transl_table=11
AM286415.1	EMBL	sequence_feature	228898	229158	.	+	.	ID=id396;Note=Pfam match to entry PF02899 Phage_integr_N%2C Phage integrase%2C N-terminal SAM-like domain%2C score 104.1%2CE-value 1.8e-28;gbkey=misc_feature;gene=xerC;inference=protein motif:PFAM:PF02899
AM286415.1	EMBL	sequence_feature	229222	229737	.	+	.	ID=id397;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 208.0%2C E-value 9.4e-60;gbkey=misc_feature;gene=xerC;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	229782	230498	.	+	.	ID=gene201;Name=YE0195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0195
AM286415.1	EMBL	CDS	229782	230498	.	+	0	ID=cds186;Parent=gene201;Dbxref=EnsemblGenomes-Gn:YE0195,EnsemblGenomes-Tr:CAL10331,GOA:A1JI93,InterPro:IPR006439,InterPro:IPR023214,UniProtKB/TrEMBL:A1JI93,NCBI_GP:CAL10331.1;Name=CAL10331.1;gbkey=CDS;product=putative haloacid dehalogenase-like hydrolase;protein_id=CAL10331.1;transl_table=11
AM286415.1	EMBL	sequence_feature	229809	230411	.	+	.	ID=id398;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 92.0%2C E-value 7.7e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	230599	232761	.	+	.	ID=gene202;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,pdeB,rad,recL;locus_tag=YE0196
AM286415.1	EMBL	CDS	230599	232761	.	+	0	ID=cds187;Parent=gene202;Dbxref=EnsemblGenomes-Gn:YE0196,EnsemblGenomes-Tr:CAL10332,GOA:A1JI94,InterPro:IPR000212,InterPro:IPR005753,InterPro:IPR013986,InterPro:IPR014016,InterPro:IPR014017,InterPro:IPR027417,UniProtKB/TrEMBL:A1JI94,NCBI_GP:CAL10332.1;Name=CAL10332.1;gbkey=CDS;gene=uvrD;product=DNA helicase II;protein_id=CAL10332.1;transl_table=11
AM286415.1	EMBL	sequence_feature	230626	232068	.	+	.	ID=id399;Note=Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase%2C score 747.8%2C E-value 2.9e-222;gbkey=misc_feature;gene=uvrD;inference=protein motif:PFAM:PF00580
AM286415.1	EMBL	sequence_feature	230683	230706	.	+	.	ID=id400;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=uvrD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	232705	232734	.	+	.	ID=id401;Note=PS00215 Mitochondrial energy transfer proteins signature.;gbkey=misc_feature;gene=uvrD;inference=protein motif:Prosite:PS00215
AM286415.1	EMBL	gene	233186	233758	.	-	.	ID=gene203;Name=YE0197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0197
AM286415.1	EMBL	CDS	233186	233758	.	-	0	ID=cds188;Parent=gene203;Dbxref=EnsemblGenomes-Gn:YE0197,EnsemblGenomes-Tr:CAL10333,GOA:A1JI95,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR015893,UniProtKB/TrEMBL:A1JI95,NCBI_GP:CAL10333.1;Name=CAL10333.1;gbkey=CDS;product=putative TetR-family regulatory protein;protein_id=CAL10333.1;transl_table=11
AM286415.1	EMBL	sequence_feature	233639	233719	.	-	.	ID=id402;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 22.2%2C E-value 3.4e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00440
AM286415.1	EMBL	sequence_feature	233666	233731	.	-	.	ID=id403;Note=Predicted helix-turn-helix motif with score 1464.000%2C SD 4.17 at aa 10-31%2C sequence PSIIEVANAAQLSRATAYRYFP;gbkey=misc_feature
AM286415.1	EMBL	gene	234065	235297	.	+	.	ID=gene204;Name=YE0198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0198
AM286415.1	EMBL	CDS	234065	235297	.	+	0	ID=cds189;Parent=gene204;Dbxref=EnsemblGenomes-Gn:YE0198,EnsemblGenomes-Tr:CAL10334,InterPro:IPR008322,UniProtKB/TrEMBL:A1JI96,NCBI_GP:CAL10334.1;Name=CAL10334.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10334.1;transl_table=11
AM286415.1	EMBL	sequence_feature	234704	234724	.	+	.	ID=id404;Note=PS00290 Immunoglobulins and major histocompatibility complex proteins signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00290
AM286415.1	EMBL	gene	235324	236154	.	+	.	ID=gene205;Name=YE0199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0199
AM286415.1	EMBL	CDS	235324	236154	.	+	0	ID=cds190;Parent=gene205;Dbxref=EnsemblGenomes-Gn:YE0199,EnsemblGenomes-Tr:CAL10335,GOA:A1JI97,InterPro:IPR009215,InterPro:IPR013785,InterPro:IPR015813,UniProtKB/TrEMBL:A1JI97,NCBI_GP:CAL10335.1;Name=CAL10335.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10335.1;transl_table=11
AM286415.1	EMBL	gene	236657	237607	.	+	.	ID=gene206;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=YE0200
AM286415.1	EMBL	CDS	236657	237607	.	+	0	ID=cds191;Parent=gene206;Dbxref=EnsemblGenomes-Gn:YE0200,EnsemblGenomes-Tr:CAL10336,GOA:A1JI98,InterPro:IPR002523,InterPro:IPR004488,UniProtKB/TrEMBL:A1JI98,NCBI_GP:CAL10336.1;Name=CAL10336.1;gbkey=CDS;gene=corA;product=magnesium and cobalt transport protein;protein_id=CAL10336.1;transl_table=11
AM286415.1	EMBL	sequence_feature	236717	237604	.	+	.	ID=id405;Note=Pfam match to entry PF01544 CorA%2C CorA-like Mg2+ transporter protein%2C score 394.8%2C E-value 5.5e-116;gbkey=misc_feature;gene=corA;inference=protein motif:PFAM:PF01544
AM286415.1	EMBL	sequence_feature	237419	237475	.	+	.	ID=id406;Note=2 probable transmembrane helices predicted for YE0200 by TMHMM2.0 at aa 255-273 and 288-310;gbkey=misc_feature;gene=corA;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	237518	237586	.	+	.	ID=id406;Note=2 probable transmembrane helices predicted for YE0200 by TMHMM2.0 at aa 255-273 and 288-310;gbkey=misc_feature;gene=corA;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	237795	238685	.	-	.	ID=gene207;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=YE0201
AM286415.1	EMBL	CDS	237795	238685	.	-	0	ID=cds192;Parent=gene207;Dbxref=EnsemblGenomes-Gn:YE0201,EnsemblGenomes-Tr:CAL10337,GOA:A1JI99,InterPro:IPR000620,InterPro:IPR004626,UniProtKB/TrEMBL:A1JI99,NCBI_GP:CAL10337.1;Name=CAL10337.1;gbkey=CDS;gene=rarD;product=putative membrane protein;protein_id=CAL10337.1;transl_table=11
AM286415.1	EMBL	sequence_feature	238602	238661	.	-	.	ID=id407;Note=10 probable transmembrane helices predicted for YE0201 by TMHMM2.0 at aa 9-28%2C 38-60%2C 73-95%2C 99-121%2C128-145%2C 150-167%2C 179-198%2C 208-230%2C 243-265 and 270-289;gbkey=misc_feature;gene=rarD;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	238506	238574	.	-	.	ID=id407;Note=10 probable transmembrane helices predicted for YE0201 by TMHMM2.0 at aa 9-28%2C 38-60%2C 73-95%2C 99-121%2C128-145%2C 150-167%2C 179-198%2C 208-230%2C 243-265 and 270-289;gbkey=misc_feature;gene=rarD;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	238401	238469	.	-	.	ID=id407;Note=10 probable transmembrane helices predicted for YE0201 by TMHMM2.0 at aa 9-28%2C 38-60%2C 73-95%2C 99-121%2C128-145%2C 150-167%2C 179-198%2C 208-230%2C 243-265 and 270-289;gbkey=misc_feature;gene=rarD;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	238323	238391	.	-	.	ID=id407;Note=10 probable transmembrane helices predicted for YE0201 by TMHMM2.0 at aa 9-28%2C 38-60%2C 73-95%2C 99-121%2C128-145%2C 150-167%2C 179-198%2C 208-230%2C 243-265 and 270-289;gbkey=misc_feature;gene=rarD;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	238251	238304	.	-	.	ID=id407;Note=10 probable transmembrane helices predicted for YE0201 by TMHMM2.0 at aa 9-28%2C 38-60%2C 73-95%2C 99-121%2C128-145%2C 150-167%2C 179-198%2C 208-230%2C 243-265 and 270-289;gbkey=misc_feature;gene=rarD;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	238185	238238	.	-	.	ID=id407;Note=10 probable transmembrane helices predicted for YE0201 by TMHMM2.0 at aa 9-28%2C 38-60%2C 73-95%2C 99-121%2C128-145%2C 150-167%2C 179-198%2C 208-230%2C 243-265 and 270-289;gbkey=misc_feature;gene=rarD;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	238092	238151	.	-	.	ID=id407;Note=10 probable transmembrane helices predicted for YE0201 by TMHMM2.0 at aa 9-28%2C 38-60%2C 73-95%2C 99-121%2C128-145%2C 150-167%2C 179-198%2C 208-230%2C 243-265 and 270-289;gbkey=misc_feature;gene=rarD;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	237996	238064	.	-	.	ID=id407;Note=10 probable transmembrane helices predicted for YE0201 by TMHMM2.0 at aa 9-28%2C 38-60%2C 73-95%2C 99-121%2C128-145%2C 150-167%2C 179-198%2C 208-230%2C 243-265 and 270-289;gbkey=misc_feature;gene=rarD;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	237891	237959	.	-	.	ID=id407;Note=10 probable transmembrane helices predicted for YE0201 by TMHMM2.0 at aa 9-28%2C 38-60%2C 73-95%2C 99-121%2C128-145%2C 150-167%2C 179-198%2C 208-230%2C 243-265 and 270-289;gbkey=misc_feature;gene=rarD;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	237819	237878	.	-	.	ID=id407;Note=10 probable transmembrane helices predicted for YE0201 by TMHMM2.0 at aa 9-28%2C 38-60%2C 73-95%2C 99-121%2C128-145%2C 150-167%2C 179-198%2C 208-230%2C 243-265 and 270-289;gbkey=misc_feature;gene=rarD;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	237831	238211	.	-	.	ID=id408;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 21.2%2C E-value 0.0016;gbkey=misc_feature;gene=rarD;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	238251	238634	.	-	.	ID=id409;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 53.9%2C E-value 2.3e-13;gbkey=misc_feature;gene=rarD;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	238765	239235	.	-	.	ID=gene208;Name=YE0202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0202
AM286415.1	EMBL	CDS	238765	239235	.	-	0	ID=cds193;Parent=gene208;Dbxref=EnsemblGenomes-Gn:YE0202,EnsemblGenomes-Tr:CAL10338,InterPro:IPR003736,InterPro:IPR006683,InterPro:IPR029069,UniProtKB/TrEMBL:A1JIA0,NCBI_GP:CAL10338.1;Name=CAL10338.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10338.1;transl_table=11
AM286415.1	EMBL	sequence_feature	238768	239181	.	-	.	ID=id410;Note=Pfam match to entry PF02584 DUF157%2C Uncharacterized protein PaaI%2C COG2050%2C score -2.7%2C E-value 0.00013;gbkey=misc_feature;inference=protein motif:PFAM:PF02584
AM286415.1	EMBL	gene	239416	240294	.	+	.	ID=gene209;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=YE0203
AM286415.1	EMBL	CDS	239416	240294	.	+	0	ID=cds194;Parent=gene209;Dbxref=EnsemblGenomes-Gn:YE0203,EnsemblGenomes-Tr:CAL10339,GOA:A1JIA1,InterPro:IPR003187,UniProtKB/TrEMBL:A1JIA1,NCBI_GP:CAL10339.1;Name=CAL10339.1;gbkey=CDS;gene=pldA;product=phospholipase A;protein_id=CAL10339.1;transl_table=11
AM286415.1	EMBL	sequence_feature	239479	240282	.	+	.	ID=id411;Note=Pfam match to entry PF02253 PLA1%2C Phospholipase A1%2C score 651.6%2C E-value 2.7e-193;gbkey=misc_feature;gene=pldA;inference=protein motif:PFAM:PF02253
AM286415.1	EMBL	gene	240371	242221	.	+	.	ID=gene210;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=YE0204
AM286415.1	EMBL	CDS	240371	242221	.	+	0	ID=cds195;Parent=gene210;Dbxref=EnsemblGenomes-Gn:YE0204,EnsemblGenomes-Tr:CAL10340,GOA:A1JIA2,InterPro:IPR001650,InterPro:IPR002121,InterPro:IPR004589,InterPro:IPR006293,InterPro:IPR010997,InterPro:IPR011545,InterPro:IPR011991,InterPro:IPR014001,InterPro:IPR018982,InterPro:IPR027417,UniProtKB/TrEMBL:A1JIA2,NCBI_GP:CAL10340.1;Name=CAL10340.1;gbkey=CDS;gene=recQ;product=ATP-dependent DNA helicase;protein_id=CAL10340.1;transl_table=11
AM286415.1	EMBL	sequence_feature	240416	241024	.	+	.	ID=id412;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 152.1%2C E-value 6.2e-43;gbkey=misc_feature;gene=recQ;inference=protein motif:PFAM:PF00270
AM286415.1	EMBL	sequence_feature	240620	240652	.	+	.	ID=id413;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=recQ;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	241148	241363	.	+	.	ID=id414;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 103.7%2C E-value 2.4e-28;gbkey=misc_feature;gene=recQ;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	241961	242203	.	+	.	ID=id415;Note=Pfam match to entry PF00570 HRDC%2C HRDC domain %2Cscore 116.3%2C E-value 3.7e-32;gbkey=misc_feature;gene=recQ;inference=protein motif:PFAM:PF00570
AM286415.1	EMBL	gene	242284	242904	.	+	.	ID=gene211;Name=rhtC;gbkey=Gene;gene=rhtC;gene_biotype=protein_coding;locus_tag=YE0205
AM286415.1	EMBL	CDS	242284	242904	.	+	0	ID=cds196;Parent=gene211;Dbxref=EnsemblGenomes-Gn:YE0205,EnsemblGenomes-Tr:CAL10341,GOA:A1JIA3,InterPro:IPR001123,InterPro:IPR004778,UniProtKB/TrEMBL:A1JIA3,NCBI_GP:CAL10341.1;Name=CAL10341.1;gbkey=CDS;gene=rhtC;product=threonine efflux protein;protein_id=CAL10341.1;transl_table=11
AM286415.1	EMBL	sequence_feature	242293	242361	.	+	.	ID=id416;Note=6 probable transmembrane helices predicted for YE0205 by TMHMM2.0 at aa 4-26%2C 42-64%2C 68-90%2C 119-141%2C151-173 and 186-205;gbkey=misc_feature;gene=rhtC;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	242407	242475	.	+	.	ID=id416;Note=6 probable transmembrane helices predicted for YE0205 by TMHMM2.0 at aa 4-26%2C 42-64%2C 68-90%2C 119-141%2C151-173 and 186-205;gbkey=misc_feature;gene=rhtC;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	242485	242553	.	+	.	ID=id416;Note=6 probable transmembrane helices predicted for YE0205 by TMHMM2.0 at aa 4-26%2C 42-64%2C 68-90%2C 119-141%2C151-173 and 186-205;gbkey=misc_feature;gene=rhtC;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	242638	242706	.	+	.	ID=id416;Note=6 probable transmembrane helices predicted for YE0205 by TMHMM2.0 at aa 4-26%2C 42-64%2C 68-90%2C 119-141%2C151-173 and 186-205;gbkey=misc_feature;gene=rhtC;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	242734	242802	.	+	.	ID=id416;Note=6 probable transmembrane helices predicted for YE0205 by TMHMM2.0 at aa 4-26%2C 42-64%2C 68-90%2C 119-141%2C151-173 and 186-205;gbkey=misc_feature;gene=rhtC;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	242839	242898	.	+	.	ID=id416;Note=6 probable transmembrane helices predicted for YE0205 by TMHMM2.0 at aa 4-26%2C 42-64%2C 68-90%2C 119-141%2C151-173 and 186-205;gbkey=misc_feature;gene=rhtC;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	242485	242811	.	+	.	ID=id417;Note=Pfam match to entry PF01810 LysE%2C LysE type translocator%2C score 115.7%2C E-value 5.8e-32;gbkey=misc_feature;gene=rhtC;inference=protein motif:PFAM:PF01810
AM286415.1	EMBL	gene	242954	243574	.	-	.	ID=gene212;Name=rhtB;gbkey=Gene;gene=rhtB;gene_biotype=protein_coding;locus_tag=YE0206
AM286415.1	EMBL	CDS	242954	243574	.	-	0	ID=cds197;Parent=gene212;Dbxref=EnsemblGenomes-Gn:YE0206,EnsemblGenomes-Tr:CAL10342,GOA:A1JIA4,InterPro:IPR001123,UniProtKB/TrEMBL:A1JIA4,NCBI_GP:CAL10342.1;Name=CAL10342.1;gbkey=CDS;gene=rhtB;product=putative homoserine/homoserine lactone efflux protein;protein_id=CAL10342.1;transl_table=11
AM286415.1	EMBL	sequence_feature	243500	243562	.	-	.	ID=id418;Note=6 probable transmembrane helices predicted for YE0206 by TMHMM2.0 at aa 5-25%2C 38-60%2C 64-86%2C 116-138%2C153-175 and 184-203;gbkey=misc_feature;gene=rhtB;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	243395	243463	.	-	.	ID=id418;Note=6 probable transmembrane helices predicted for YE0206 by TMHMM2.0 at aa 5-25%2C 38-60%2C 64-86%2C 116-138%2C153-175 and 184-203;gbkey=misc_feature;gene=rhtB;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	243317	243385	.	-	.	ID=id418;Note=6 probable transmembrane helices predicted for YE0206 by TMHMM2.0 at aa 5-25%2C 38-60%2C 64-86%2C 116-138%2C153-175 and 184-203;gbkey=misc_feature;gene=rhtB;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	243161	243229	.	-	.	ID=id418;Note=6 probable transmembrane helices predicted for YE0206 by TMHMM2.0 at aa 5-25%2C 38-60%2C 64-86%2C 116-138%2C153-175 and 184-203;gbkey=misc_feature;gene=rhtB;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	243050	243118	.	-	.	ID=id418;Note=6 probable transmembrane helices predicted for YE0206 by TMHMM2.0 at aa 5-25%2C 38-60%2C 64-86%2C 116-138%2C153-175 and 184-203;gbkey=misc_feature;gene=rhtB;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	242966	243025	.	-	.	ID=id418;Note=6 probable transmembrane helices predicted for YE0206 by TMHMM2.0 at aa 5-25%2C 38-60%2C 64-86%2C 116-138%2C153-175 and 184-203;gbkey=misc_feature;gene=rhtB;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	243056	243364	.	-	.	ID=id419;Note=Pfam match to entry PF01810 LysE%2C LysE type translocator%2C score 112.4%2C E-value 5.6e-31;gbkey=misc_feature;gene=rhtB;inference=protein motif:PFAM:PF01810
AM286415.1	EMBL	gene	243778	244833	.	+	.	ID=gene213;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=YE0207
AM286415.1	EMBL	CDS	243778	244833	.	+	0	ID=cds198;Parent=gene213;Dbxref=EnsemblGenomes-Gn:YE0207,EnsemblGenomes-Tr:CAL10343,InterPro:IPR022742,InterPro:IPR029058,UniProtKB/TrEMBL:A1JIA5,NCBI_GP:CAL10343.1;Name=CAL10343.1;gbkey=CDS;gene=pldB;product=putative lysophospholipase;protein_id=CAL10343.1;transl_table=11
AM286415.1	EMBL	sequence_feature	244027	244752	.	+	.	ID=id420;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 94.9%2C E-value 1e-25;gbkey=misc_feature;gene=pldB;inference=protein motif:PFAM:PF00561
AM286415.1	EMBL	gene	244845	245654	.	+	.	ID=gene214;Name=YE0208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0208
AM286415.1	EMBL	CDS	244845	245654	.	+	0	ID=cds199;Parent=gene214;Dbxref=EnsemblGenomes-Gn:YE0208,EnsemblGenomes-Tr:CAL10344,GOA:A1JIA6,InterPro:IPR000150,InterPro:IPR006379,InterPro:IPR023214,UniProtKB/TrEMBL:A1JIA6,NCBI_GP:CAL10344.1;Name=CAL10344.1;gbkey=CDS;product=putative haloacid dehalogenase-like hydrolase;protein_id=CAL10344.1;transl_table=11
AM286415.1	EMBL	sequence_feature	244848	245549	.	+	.	ID=id421;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 31.2%2C E-value 1.6e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	244854	244889	.	+	.	ID=id422;Note=PS01228 Hypothetical cof family signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS01228
AM286415.1	EMBL	gene	245866	246864	.	-	.	ID=gene215;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=YE0209
AM286415.1	EMBL	CDS	245866	246864	.	-	0	ID=cds200;Parent=gene215;Dbxref=EnsemblGenomes-Gn:YE0209,EnsemblGenomes-Tr:CAL10345,GOA:A1JIA7,InterPro:IPR004129,InterPro:IPR017946,UniProtKB/TrEMBL:A1JIA7,NCBI_GP:CAL10345.1;Name=CAL10345.1;gbkey=CDS;gene=glpQ;product=glycerophosphoryl diester phosphodiesterase;protein_id=CAL10345.1;transl_table=11
AM286415.1	EMBL	sequence_feature	245899	246852	.	-	.	ID=id423;Note=Pfam match to entry PF03009 GDPD%2C Glycerophosphoryl diester phosphodiesterase family%2C score 317.6%2C E-value 9.4e-93;gbkey=misc_feature;gene=glpQ;inference=protein motif:PFAM:PF03009
AM286415.1	EMBL	gene	247088	248452	.	-	.	ID=gene216;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=YE0210
AM286415.1	EMBL	CDS	247088	248452	.	-	0	ID=cds201;Parent=gene216;Dbxref=EnsemblGenomes-Gn:YE0210,EnsemblGenomes-Tr:CAL10346,GOA:A1JIA8,InterPro:IPR000849,InterPro:IPR005267,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,InterPro:IPR021159,UniProtKB/TrEMBL:A1JIA8,NCBI_GP:CAL10346.1;Name=CAL10346.1;Note=Highly similar to Escherichia coli glycerol-3-phosphate transporter glpT or b2240 SWALL:GLPT_ECOLI (SWALL:P08194) (452 aa) fasta scores: E(): 2.3e-165%2C 91.29 38d in 448 aa and to Salmonella typhimurium MFS family%2C Sn-glycerol-3-phosphate transport protein GlpT or stm2283 SWALL:Q8ZNG6 (EMBL:AE008802) (452 aa) fasta scores: E(): 2.8e-167%2C 92.58 38d in 445 aa;gbkey=CDS;gene=glpT;inference=similar to sequence:UniProtKB:P08194;product=glycerol-3-phosphate transporter;protein_id=CAL10346.1;transl_table=11
AM286415.1	EMBL	sequence_feature	247106	248368	.	-	.	ID=id424;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -109.0%2C E-value 0.00052;gbkey=misc_feature;gene=glpT;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	248318	248377	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	248192	248260	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	248105	248173	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	248027	248095	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	247904	247972	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	247832	247891	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	247634	247693	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	247517	247576	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	247430	247498	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	247334	247402	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	247229	247297	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	247142	247201	.	-	.	ID=id425;Note=12 probable transmembrane helices predicted for YE0210 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-116%2C 120-142%2C161-183%2C 188-207%2C 254-273%2C 293-312%2C 319-341%2C 351-373%2C386-408 and 418-437;gbkey=misc_feature;gene=glpT;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	247946	247996	.	-	.	ID=id426;Note=PS00942 glpT family of transporters signature.;gbkey=misc_feature;gene=glpT;inference=protein motif:Prosite:PS00942
AM286415.1	EMBL	gene	248974	250629	.	+	.	ID=gene217;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=YE0212
AM286415.1	EMBL	CDS	248974	250629	.	+	0	ID=cds202;Parent=gene217;Dbxref=EnsemblGenomes-Gn:YE0212,EnsemblGenomes-Tr:CAL10347,GOA:A1JIA9,InterPro:IPR000447,InterPro:IPR006076,InterPro:IPR007419,InterPro:IPR017752,UniProtKB/TrEMBL:A1JIA9,NCBI_GP:CAL10347.1;Name=CAL10347.1;gbkey=CDS;gene=glpA;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=CAL10347.1;transl_table=11
AM286415.1	EMBL	sequence_feature	249001	250074	.	+	.	ID=id427;Note=Pfam match to entry PF01266 DAO%2C FAD dependent oxidoreductase%2C score 408.8%2C E-value 3.2e-120;gbkey=misc_feature;gene=glpA;inference=protein motif:PFAM:PF01266
AM286415.1	EMBL	sequence_feature	249016	249069	.	+	.	ID=id428;Note=PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1.;gbkey=misc_feature;gene=glpA;inference=protein motif:Prosite:PS00977
AM286415.1	EMBL	sequence_feature	250030	250062	.	+	.	ID=id429;Note=PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2.;gbkey=misc_feature;gene=glpA;inference=protein motif:Prosite:PS00978
AM286415.1	EMBL	gene	250619	251893	.	+	.	ID=gene218;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=YE0213
AM286415.1	EMBL	CDS	250619	251893	.	+	0	ID=cds203;Parent=gene218;Dbxref=EnsemblGenomes-Gn:YE0213,EnsemblGenomes-Tr:CAL10348,GOA:A1JIB0,InterPro:IPR003953,InterPro:IPR009158,NCBI_GP:CAL10348.1;Name=CAL10348.1;gbkey=CDS;gene=glpB;product=putative anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=CAL10348.1;transl_table=11
AM286415.1	EMBL	gene	251932	253155	.	+	.	ID=gene219;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=YE0214
AM286415.1	EMBL	CDS	251932	253155	.	+	0	ID=cds204;Parent=gene219;Dbxref=EnsemblGenomes-Gn:YE0214,EnsemblGenomes-Tr:CAL10349,GOA:A1JIB1,InterPro:IPR004017,InterPro:IPR009051,InterPro:IPR017753,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JIB1,NCBI_GP:CAL10349.1;Name=CAL10349.1;gbkey=CDS;gene=glpC;product=anaerobic glycerol-3-phosphate dehydrogenase subunit C;protein_id=CAL10349.1;transl_table=11
AM286415.1	EMBL	sequence_feature	251959	251994	.	+	.	ID=id430;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=glpC;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	252079	252150	.	+	.	ID=id431;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 13.2%2C E-value 0.0015;gbkey=misc_feature;gene=glpC;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	252100	252135	.	+	.	ID=id432;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=glpC;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	252490	252681	.	+	.	ID=id433;Note=Pfam match to entry PF02754 DUF224%2C Domain of unknown function (DUF224)%2C score 35.2%2C E-value 9.6e-08;gbkey=misc_feature;gene=glpC;inference=protein motif:PFAM:PF02754
AM286415.1	EMBL	sequence_feature	252895	253083	.	+	.	ID=id434;Note=Pfam match to entry PF02754 DUF224%2C Domain of unknown function (DUF224)%2C score 61.2%2C E-value 1.5e-15;gbkey=misc_feature;gene=glpC;inference=protein motif:PFAM:PF02754
AM286415.1	EMBL	gene	253311	253754	.	-	.	ID=gene220;Name=dcrB;gbkey=Gene;gene=dcrB;gene_biotype=protein_coding;locus_tag=YE0215
AM286415.1	EMBL	CDS	253311	253754	.	-	0	ID=cds205;Parent=gene220;Dbxref=EnsemblGenomes-Gn:YE0215,EnsemblGenomes-Tr:CAL10350,UniProtKB/TrEMBL:A1JIB2,NCBI_GP:CAL10350.1;Name=CAL10350.1;gbkey=CDS;gene=dcrB;product=putative lipoprotein;protein_id=CAL10350.1;transl_table=11
AM286415.1	EMBL	gene	253896	254576	.	-	.	ID=gene221;Name=yhhQ;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;locus_tag=YE0216
AM286415.1	EMBL	CDS	253896	254576	.	-	0	ID=cds206;Parent=gene221;Dbxref=EnsemblGenomes-Gn:YE0216,EnsemblGenomes-Tr:CAL10351,InterPro:IPR003744,UniProtKB/TrEMBL:A1JIB3,NCBI_GP:CAL10351.1;Name=CAL10351.1;gbkey=CDS;gene=yhhQ;product=putative membrane protein;protein_id=CAL10351.1;transl_table=11
AM286415.1	EMBL	sequence_feature	253947	254564	.	-	.	ID=id435;Note=Pfam match to entry PF02592 DUF165%2C Uncharacterized ACR%2C YhhQ family COG1738%2C score 254.3%2C E-value 1.1e-73;gbkey=misc_feature;gene=yhhQ;inference=protein motif:PFAM:PF02592
AM286415.1	EMBL	sequence_feature	254472	254540	.	-	.	ID=id436;Note=6 probable transmembrane helices predicted for YE0216 by TMHMM2.0 at aa 13-35%2C 45-64%2C 71-93%2C 108-130%2C142-164 and 184-206;gbkey=misc_feature;gene=yhhQ;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	254385	254444	.	-	.	ID=id436;Note=6 probable transmembrane helices predicted for YE0216 by TMHMM2.0 at aa 13-35%2C 45-64%2C 71-93%2C 108-130%2C142-164 and 184-206;gbkey=misc_feature;gene=yhhQ;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	254298	254366	.	-	.	ID=id436;Note=6 probable transmembrane helices predicted for YE0216 by TMHMM2.0 at aa 13-35%2C 45-64%2C 71-93%2C 108-130%2C142-164 and 184-206;gbkey=misc_feature;gene=yhhQ;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	254187	254255	.	-	.	ID=id436;Note=6 probable transmembrane helices predicted for YE0216 by TMHMM2.0 at aa 13-35%2C 45-64%2C 71-93%2C 108-130%2C142-164 and 184-206;gbkey=misc_feature;gene=yhhQ;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	254085	254153	.	-	.	ID=id436;Note=6 probable transmembrane helices predicted for YE0216 by TMHMM2.0 at aa 13-35%2C 45-64%2C 71-93%2C 108-130%2C142-164 and 184-206;gbkey=misc_feature;gene=yhhQ;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	253959	254027	.	-	.	ID=id436;Note=6 probable transmembrane helices predicted for YE0216 by TMHMM2.0 at aa 13-35%2C 45-64%2C 71-93%2C 108-130%2C142-164 and 184-206;gbkey=misc_feature;gene=yhhQ;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	254823	255077	.	+	.	ID=gene222;Name=YE0217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0217
AM286415.1	EMBL	CDS	254823	255077	.	+	0	ID=cds207;Parent=gene222;Dbxref=EnsemblGenomes-Gn:YE0217,EnsemblGenomes-Tr:CAL10352,GOA:A1JIB4,InterPro:IPR001455,InterPro:IPR022931,NCBI_GP:CAL10352.1;Name=CAL10352.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10352.1;transl_table=11
AM286415.1	EMBL	sequence_feature	254838	255059	.	+	.	ID=id437;Note=Pfam match to entry PF01206 UPF0033%2CUncharacterized protein family UPF0033%2C score 136.2%2CE-value 3.8e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF01206
AM286415.1	EMBL	sequence_feature	254856	254894	.	+	.	ID=id438;Note=PS01148 Uncharacterized protein family UPF0033 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01148
AM286415.1	EMBL	gene	255099	257429	.	-	.	ID=gene223;Name=YE0218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0218
AM286415.1	EMBL	CDS	255099	257429	.	-	0	ID=cds208;Parent=gene223;Dbxref=EnsemblGenomes-Gn:YE0218,EnsemblGenomes-Tr:CAL10353,GOA:A1JIB5,InterPro:IPR001757,InterPro:IPR006121,InterPro:IPR008250,InterPro:IPR017969,InterPro:IPR018303,InterPro:IPR023214,InterPro:IPR023299,InterPro:IPR027256,UniProtKB/TrEMBL:A1JIB5,NCBI_GP:CAL10353.1;Name=CAL10353.1;gbkey=CDS;product=putative P-type cation-translocating membrane ATPase;protein_id=CAL10353.1;transl_table=11
AM286415.1	EMBL	sequence_feature	255138	255173	.	-	.	ID=id439;Note=PS00141 Eukaryotic and viral aspartyl proteases active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00141
AM286415.1	EMBL	sequence_feature	256875	256934	.	-	.	ID=id440;Note=6 probable transmembrane helices predicted for YE0218 by TMHMM2.0 at aa 166-185%2C 192-214%2C 229-251%2C388-410%2C 425-447 and 732-754;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	256788	256856	.	-	.	ID=id440;Note=6 probable transmembrane helices predicted for YE0218 by TMHMM2.0 at aa 166-185%2C 192-214%2C 229-251%2C388-410%2C 425-447 and 732-754;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	256677	256745	.	-	.	ID=id440;Note=6 probable transmembrane helices predicted for YE0218 by TMHMM2.0 at aa 166-185%2C 192-214%2C 229-251%2C388-410%2C 425-447 and 732-754;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	256200	256268	.	-	.	ID=id440;Note=6 probable transmembrane helices predicted for YE0218 by TMHMM2.0 at aa 166-185%2C 192-214%2C 229-251%2C388-410%2C 425-447 and 732-754;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	256089	256157	.	-	.	ID=id440;Note=6 probable transmembrane helices predicted for YE0218 by TMHMM2.0 at aa 166-185%2C 192-214%2C 229-251%2C388-410%2C 425-447 and 732-754;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	255168	255236	.	-	.	ID=id440;Note=6 probable transmembrane helices predicted for YE0218 by TMHMM2.0 at aa 166-185%2C 192-214%2C 229-251%2C388-410%2C 425-447 and 732-754;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	255357	256028	.	-	.	ID=id441;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 106.1%2C E-value 4.4e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	255360	255428	.	-	.	ID=id442;Note=PS01229 Hypothetical cof family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01229
AM286415.1	EMBL	sequence_feature	255990	256010	.	-	.	ID=id443;Note=PS00154 E1-E2 ATPases phosphorylation site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00154
AM286415.1	EMBL	sequence_feature	256038	256703	.	-	.	ID=id444;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 295.6%2C E-value 4e-86;gbkey=misc_feature;inference=protein motif:PFAM:PF00122
AM286415.1	EMBL	sequence_feature	256989	257180	.	-	.	ID=id445;Note=Pfam match to entry PF00403 HMA%2CHeavy-metal-associated domain%2C score 53.8%2C E-value 2.5e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00403
AM286415.1	EMBL	sequence_feature	257079	257168	.	-	.	ID=id446;Note=PS01047 Heavy-metal-associated domain.;gbkey=misc_feature;inference=protein motif:Prosite:PS01047
AM286415.1	EMBL	gene	257713	258339	.	-	.	ID=gene224;Name=yhhN;gbkey=Gene;gene=yhhN;gene_biotype=protein_coding;locus_tag=YE0219
AM286415.1	EMBL	CDS	257713	258339	.	-	0	ID=cds209;Parent=gene224;Dbxref=EnsemblGenomes-Gn:YE0219,EnsemblGenomes-Tr:CAL10354,GOA:A1JIB6,InterPro:IPR012506,UniProtKB/TrEMBL:A1JIB6,NCBI_GP:CAL10354.1;Name=CAL10354.1;gbkey=CDS;gene=yhhN;product=putative membrane protein;protein_id=CAL10354.1;transl_table=11
AM286415.1	EMBL	sequence_feature	258199	258258	.	-	.	ID=id447;Note=7 probable transmembrane helices predicted for YE0219 by TMHMM2.0 at aa 28-47%2C 52-71%2C 76-95%2C 100-122%2C129-147%2C 157-176 and 189-207;gbkey=misc_feature;gene=yhhN;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	258127	258186	.	-	.	ID=id447;Note=7 probable transmembrane helices predicted for YE0219 by TMHMM2.0 at aa 28-47%2C 52-71%2C 76-95%2C 100-122%2C129-147%2C 157-176 and 189-207;gbkey=misc_feature;gene=yhhN;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	258055	258114	.	-	.	ID=id447;Note=7 probable transmembrane helices predicted for YE0219 by TMHMM2.0 at aa 28-47%2C 52-71%2C 76-95%2C 100-122%2C129-147%2C 157-176 and 189-207;gbkey=misc_feature;gene=yhhN;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	257974	258042	.	-	.	ID=id447;Note=7 probable transmembrane helices predicted for YE0219 by TMHMM2.0 at aa 28-47%2C 52-71%2C 76-95%2C 100-122%2C129-147%2C 157-176 and 189-207;gbkey=misc_feature;gene=yhhN;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	257899	257955	.	-	.	ID=id447;Note=7 probable transmembrane helices predicted for YE0219 by TMHMM2.0 at aa 28-47%2C 52-71%2C 76-95%2C 100-122%2C129-147%2C 157-176 and 189-207;gbkey=misc_feature;gene=yhhN;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	257812	257871	.	-	.	ID=id447;Note=7 probable transmembrane helices predicted for YE0219 by TMHMM2.0 at aa 28-47%2C 52-71%2C 76-95%2C 100-122%2C129-147%2C 157-176 and 189-207;gbkey=misc_feature;gene=yhhN;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	257719	257775	.	-	.	ID=id447;Note=7 probable transmembrane helices predicted for YE0219 by TMHMM2.0 at aa 28-47%2C 52-71%2C 76-95%2C 100-122%2C129-147%2C 157-176 and 189-207;gbkey=misc_feature;gene=yhhN;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	258627	258947	.	+	.	ID=gene225;Name=YE0221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0221
AM286415.1	EMBL	CDS	258627	258947	.	+	0	ID=cds210;Parent=gene225;Dbxref=EnsemblGenomes-Gn:YE0221,EnsemblGenomes-Tr:CAL10355,InterPro:IPR014949,UniProtKB/TrEMBL:A1JIB7,NCBI_GP:CAL10355.1;Name=CAL10355.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10355.1;transl_table=11
AM286415.1	EMBL	gene	258986	259369	.	+	.	ID=gene226;Name=YE0222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0222
AM286415.1	EMBL	CDS	258986	259369	.	+	0	ID=cds211;Parent=gene226;Dbxref=EnsemblGenomes-Gn:YE0222,EnsemblGenomes-Tr:CAL10356,InterPro:IPR019635,UniProtKB/TrEMBL:A1JIB8,NCBI_GP:CAL10356.1;Name=CAL10356.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10356.1;transl_table=11
AM286415.1	EMBL	sequence_feature	258998	259057	.	+	.	ID=id448;Note=1 probable transmembrane helix predicted for YE0222 by TMHMM2.0 at aa 5-24;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	259410	259682	.	-	.	ID=gene227;Name=yhhL;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=YE0223
AM286415.1	EMBL	CDS	259410	259682	.	-	0	ID=cds212;Parent=gene227;Dbxref=EnsemblGenomes-Gn:YE0223,EnsemblGenomes-Tr:CAL10357,InterPro:IPR009525,UniProtKB/TrEMBL:A1JIB9,NCBI_GP:CAL10357.1;Name=CAL10357.1;gbkey=CDS;gene=yhhL;product=putative membrane protein;protein_id=CAL10357.1;transl_table=11
AM286415.1	EMBL	sequence_feature	259617	259670	.	-	.	ID=id449;Note=3 probable transmembrane helices predicted for YE0223 by TMHMM2.0 at aa 5-22%2C 29-51 and 61-80;gbkey=misc_feature;gene=yhhL;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	259530	259598	.	-	.	ID=id449;Note=3 probable transmembrane helices predicted for YE0223 by TMHMM2.0 at aa 5-22%2C 29-51 and 61-80;gbkey=misc_feature;gene=yhhL;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	259443	259502	.	-	.	ID=id449;Note=3 probable transmembrane helices predicted for YE0223 by TMHMM2.0 at aa 5-22%2C 29-51 and 61-80;gbkey=misc_feature;gene=yhhL;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	259672	260226	.	-	.	ID=gene228;Name=YE0224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0224
AM286415.1	EMBL	CDS	259672	260226	.	-	0	ID=cds213;Parent=gene228;Dbxref=EnsemblGenomes-Gn:YE0224,EnsemblGenomes-Tr:CAL10358,GOA:A1JIC0,InterPro:IPR002052,InterPro:IPR004398,InterPro:IPR029063,UniProtKB/TrEMBL:A1JIC0,NCBI_GP:CAL10358.1;Name=CAL10358.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10358.1;transl_table=11
AM286415.1	EMBL	sequence_feature	259738	260223	.	-	.	ID=id450;Note=Pfam match to entry PF03602 Cons_hypoth95%2CConserved hypothetical protein 95%2C score 223.8%2C E-value 1.6e-64;gbkey=misc_feature;inference=protein motif:PFAM:PF03602
AM286415.1	EMBL	sequence_feature	259912	259932	.	-	.	ID=id451;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	260574	262097	.	+	.	ID=gene229;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=YE0225
AM286415.1	EMBL	CDS	260574	262097	.	+	0	ID=cds214;Parent=gene229;Dbxref=EnsemblGenomes-Gn:YE0225,EnsemblGenomes-Tr:CAL10359,GOA:A1JIC1,InterPro:IPR000897,InterPro:IPR003593,InterPro:IPR004390,InterPro:IPR013822,InterPro:IPR027417,UniProtKB/TrEMBL:A1JIC1,NCBI_GP:CAL10359.1;Name=CAL10359.1;gbkey=CDS;gene=ftsY;product=cell division protein;protein_id=CAL10359.1;transl_table=11
AM286415.1	EMBL	sequence_feature	261198	261443	.	+	.	ID=id452;Note=Pfam match to entry PF02881 SRP54_N%2C SRP54-type protein%2C helical bundle domain%2C score 81.0%2C E-value 1.6e-21;gbkey=misc_feature;gene=ftsY;inference=protein motif:PFAM:PF02881
AM286415.1	EMBL	sequence_feature	261474	262088	.	+	.	ID=id453;Note=Pfam match to entry PF00448 SRP54%2C SRP54-type protein%2C GTPase domain%2C score 416.8%2C E-value 1.3e-122;gbkey=misc_feature;gene=ftsY;inference=protein motif:PFAM:PF00448
AM286415.1	EMBL	sequence_feature	261501	261524	.	+	.	ID=id454;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ftsY;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	262002	262043	.	+	.	ID=id455;Note=PS00300 SRP54-type proteins GTP-binding domain signature.;gbkey=misc_feature;gene=ftsY;inference=protein motif:Prosite:PS00300
AM286415.1	EMBL	gene	262103	262771	.	+	.	ID=gene230;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=YE0226
AM286415.1	EMBL	CDS	262103	262771	.	+	0	ID=cds215;Parent=gene230;Dbxref=EnsemblGenomes-Gn:YE0226,EnsemblGenomes-Tr:CAL10360,GOA:A1JIC2,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005286,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JIC2,NCBI_GP:CAL10360.1;Name=CAL10360.1;gbkey=CDS;gene=ftsE;product=cell division ATP-binding protein;protein_id=CAL10360.1;transl_table=11
AM286415.1	EMBL	sequence_feature	262184	262741	.	+	.	ID=id456;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 239.0%2C E-value 4.5e-69;gbkey=misc_feature;gene=ftsE;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	262205	262228	.	+	.	ID=id457;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ftsE;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	262514	262558	.	+	.	ID=id458;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=ftsE;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	262860	263720	.	+	.	ID=gene231;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;gene_synonym=ftsS;locus_tag=YE0227
AM286415.1	EMBL	CDS	262860	263720	.	+	0	ID=cds216;Parent=gene231;Dbxref=EnsemblGenomes-Gn:YE0227,EnsemblGenomes-Tr:CAL10361,GOA:A1JIC3,InterPro:IPR003838,InterPro:IPR004513,UniProtKB/TrEMBL:A1JIC3,NCBI_GP:CAL10361.1;Name=CAL10361.1;gbkey=CDS;gene=ftsX;product=cell division protein;protein_id=CAL10361.1;transl_table=11
AM286415.1	EMBL	sequence_feature	262878	262946	.	+	.	ID=id459;Note=4 probable transmembrane helices predicted for YE0227 by TMHMM2.0 at aa 7-29%2C 158-180%2C 201-223 and 258-277;gbkey=misc_feature;gene=ftsX;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	263331	263399	.	+	.	ID=id459;Note=4 probable transmembrane helices predicted for YE0227 by TMHMM2.0 at aa 7-29%2C 158-180%2C 201-223 and 258-277;gbkey=misc_feature;gene=ftsX;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	263460	263528	.	+	.	ID=id459;Note=4 probable transmembrane helices predicted for YE0227 by TMHMM2.0 at aa 7-29%2C 158-180%2C 201-223 and 258-277;gbkey=misc_feature;gene=ftsX;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	263631	263690	.	+	.	ID=id459;Note=4 probable transmembrane helices predicted for YE0227 by TMHMM2.0 at aa 7-29%2C 158-180%2C 201-223 and 258-277;gbkey=misc_feature;gene=ftsX;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	263310	263699	.	+	.	ID=id460;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score 74.6%2C E-value 1.4e-19;gbkey=misc_feature;gene=ftsX;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	gene	264131	264988	.	+	.	ID=gene232;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;gene_synonym=fam,hin,htpR;locus_tag=YE0228
AM286415.1	EMBL	CDS	264131	264988	.	+	0	ID=cds217;Parent=gene232;Dbxref=EnsemblGenomes-Gn:YE0228,EnsemblGenomes-Tr:CAL10362,GOA:A1JIC4,InterPro:IPR000943,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR009042,InterPro:IPR011991,InterPro:IPR012759,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,UniProtKB/TrEMBL:A1JIC4,NCBI_GP:CAL10362.1;Name=CAL10362.1;gbkey=CDS;gene=rpoH;product=RNA polymerase sigma-32 factor;protein_id=CAL10362.1;transl_table=11
AM286415.1	EMBL	sequence_feature	264359	264400	.	+	.	ID=id461;Note=PS00715 Sigma-70 factors family signature 1.;gbkey=misc_feature;gene=rpoH;inference=protein motif:Prosite:PS00715
AM286415.1	EMBL	sequence_feature	264884	264949	.	+	.	ID=id462;Note=Predicted helix-turn-helix motif with score 2068.000%2C SD 6.23 at aa 252-273%2C sequence STLQELADQYGVSAERVRQLEK;gbkey=misc_feature;gene=rpoH
AM286415.1	EMBL	sequence_feature	264887	264967	.	+	.	ID=id463;Note=PS00716 Sigma-70 factors family signature 2.;gbkey=misc_feature;gene=rpoH;inference=protein motif:Prosite:PS00716
AM286415.1	EMBL	gene	265084	265476	.	-	.	ID=gene233;Name=yhhK;gbkey=Gene;gene=yhhK;gene_biotype=protein_coding;locus_tag=YE0229
AM286415.1	EMBL	CDS	265084	265476	.	-	0	ID=cds218;Parent=gene233;Dbxref=EnsemblGenomes-Gn:YE0229,EnsemblGenomes-Tr:CAL10363,GOA:A1JIC5,InterPro:IPR000182,InterPro:IPR016181,InterPro:IPR024612,UniProtKB/TrEMBL:A1JIC5,NCBI_GP:CAL10363.1;Name=CAL10363.1;gbkey=CDS;gene=yhhK;product=putative acetyltransferase;protein_id=CAL10363.1;transl_table=11
AM286415.1	EMBL	sequence_feature	265111	265353	.	-	.	ID=id464;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 23.4%2C E-value 0.00035;gbkey=misc_feature;gene=yhhK;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	265898	267013	.	+	.	ID=gene234;Name=livK;gbkey=Gene;gene=livK;gene_biotype=protein_coding;gene_synonym=livJ;locus_tag=YE0230
AM286415.1	EMBL	CDS	265898	267013	.	+	0	ID=cds219;Parent=gene234;Dbxref=EnsemblGenomes-Gn:YE0230,EnsemblGenomes-Tr:CAL10364,GOA:A1JIC6,InterPro:IPR000709,InterPro:IPR028081,InterPro:IPR028082,UniProtKB/TrEMBL:A1JIC6,NCBI_GP:CAL10364.1;Name=CAL10364.1;gbkey=CDS;gene=livK;product=branched-chain amino acid-binding protein;protein_id=CAL10364.1;transl_table=11
AM286415.1	EMBL	sequence_feature	265958	267007	.	+	.	ID=id465;Note=Pfam match to entry PF01094 ANF_receptor%2C Receptor family ligand binding region%2C score 175.3%2C E-value 6.6e-50;gbkey=misc_feature;gene=livK;inference=protein motif:PFAM:PF01094
AM286415.1	EMBL	gene	267172	268098	.	+	.	ID=gene235;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=YE0231
AM286415.1	EMBL	CDS	267172	268098	.	+	0	ID=cds220;Parent=gene235;Dbxref=EnsemblGenomes-Gn:YE0231,EnsemblGenomes-Tr:CAL10365,GOA:A1JIC7,InterPro:IPR001851,UniProtKB/TrEMBL:A1JIC7,NCBI_GP:CAL10365.1;Name=CAL10365.1;gbkey=CDS;gene=livH;product=high-affinity branched-chain amino acid transport system%2C permease protein;protein_id=CAL10365.1;transl_table=11
AM286415.1	EMBL	sequence_feature	267193	268083	.	+	.	ID=id466;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score 323.1%2C E-value 2e-94;gbkey=misc_feature;gene=livH;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	sequence_feature	267214	267282	.	+	.	ID=id467;Note=8 probable transmembrane helices predicted for YE0231 by TMHMM2.0 at aa 15-37%2C 44-66%2C 70-92%2C 105-124%2C153-175%2C 207-229%2C 244-266 and 282-301;gbkey=misc_feature;gene=livH;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	267301	267369	.	+	.	ID=id467;Note=8 probable transmembrane helices predicted for YE0231 by TMHMM2.0 at aa 15-37%2C 44-66%2C 70-92%2C 105-124%2C153-175%2C 207-229%2C 244-266 and 282-301;gbkey=misc_feature;gene=livH;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	267379	267447	.	+	.	ID=id467;Note=8 probable transmembrane helices predicted for YE0231 by TMHMM2.0 at aa 15-37%2C 44-66%2C 70-92%2C 105-124%2C153-175%2C 207-229%2C 244-266 and 282-301;gbkey=misc_feature;gene=livH;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	267484	267543	.	+	.	ID=id467;Note=8 probable transmembrane helices predicted for YE0231 by TMHMM2.0 at aa 15-37%2C 44-66%2C 70-92%2C 105-124%2C153-175%2C 207-229%2C 244-266 and 282-301;gbkey=misc_feature;gene=livH;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	267628	267696	.	+	.	ID=id467;Note=8 probable transmembrane helices predicted for YE0231 by TMHMM2.0 at aa 15-37%2C 44-66%2C 70-92%2C 105-124%2C153-175%2C 207-229%2C 244-266 and 282-301;gbkey=misc_feature;gene=livH;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	267790	267858	.	+	.	ID=id467;Note=8 probable transmembrane helices predicted for YE0231 by TMHMM2.0 at aa 15-37%2C 44-66%2C 70-92%2C 105-124%2C153-175%2C 207-229%2C 244-266 and 282-301;gbkey=misc_feature;gene=livH;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	267901	267969	.	+	.	ID=id467;Note=8 probable transmembrane helices predicted for YE0231 by TMHMM2.0 at aa 15-37%2C 44-66%2C 70-92%2C 105-124%2C153-175%2C 207-229%2C 244-266 and 282-301;gbkey=misc_feature;gene=livH;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	268015	268074	.	+	.	ID=id467;Note=8 probable transmembrane helices predicted for YE0231 by TMHMM2.0 at aa 15-37%2C 44-66%2C 70-92%2C 105-124%2C153-175%2C 207-229%2C 244-266 and 282-301;gbkey=misc_feature;gene=livH;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	268095	269381	.	+	.	ID=gene236;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=YE0232
AM286415.1	EMBL	CDS	268095	269381	.	+	0	ID=cds221;Parent=gene236;Dbxref=EnsemblGenomes-Gn:YE0232,EnsemblGenomes-Tr:CAL10366,GOA:A1JIC8,InterPro:IPR001851,InterPro:IPR021807,UniProtKB/TrEMBL:A1JIC8,NCBI_GP:CAL10366.1;Name=CAL10366.1;gbkey=CDS;gene=livM;product=high-affinity branched-chain amino acid transport system%2C permease protein;protein_id=CAL10366.1;transl_table=11
AM286415.1	EMBL	sequence_feature	268113	268181	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	268224	268277	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	268365	268424	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	268434	268502	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	268506	268574	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	268584	268652	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	268671	268724	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	268875	268943	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	269037	269105	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	269148	269216	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	269235	269294	.	+	.	ID=id468;Note=11 probable transmembrane helices predicted for YE0232 by TMHMM2.0 at aa 7-29%2C 44-61%2C 91-110%2C 114-136%2C138-160%2C 164-186%2C 193-210%2C 261-283%2C 315-337%2C 352-374 and 381-400;gbkey=misc_feature;gene=livM;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	268314	269351	.	+	.	ID=id469;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score 357.7%2C E-value 8.3e-105;gbkey=misc_feature;gene=livM;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	gene	269378	270145	.	+	.	ID=gene237;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=YE0233
AM286415.1	EMBL	CDS	269378	270145	.	+	0	ID=cds222;Parent=gene237;Dbxref=EnsemblGenomes-Gn:YE0233,EnsemblGenomes-Tr:CAL10367,GOA:A1JIC9,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JIC9,NCBI_GP:CAL10367.1;Name=CAL10367.1;gbkey=CDS;gene=livG;product=high-affinity branched-chain amino acid transport%2C ATP-binding protein;protein_id=CAL10367.1;transl_table=11
AM286415.1	EMBL	sequence_feature	269471	270070	.	+	.	ID=id470;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 230.2%2C E-value 1.9e-66;gbkey=misc_feature;gene=livG;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	269492	269515	.	+	.	ID=id471;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=livG;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	269840	269884	.	+	.	ID=id472;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=livG;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	270190	270891	.	+	.	ID=gene238;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=YE0234
AM286415.1	EMBL	CDS	270190	270891	.	+	0	ID=cds223;Parent=gene238;Dbxref=EnsemblGenomes-Gn:YE0234,EnsemblGenomes-Tr:CAL10368,GOA:A1JID0,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JID0,NCBI_GP:CAL10368.1;Name=CAL10368.1;gbkey=CDS;gene=livF;product=high-affinity branched-chain amino acid transport%2C ATP-binding protein;protein_id=CAL10368.1;transl_table=11
AM286415.1	EMBL	sequence_feature	270268	270816	.	+	.	ID=id473;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 200.5%2C E-value 1.7e-57;gbkey=misc_feature;gene=livF;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	270289	270312	.	+	.	ID=id474;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=livF;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	270589	270633	.	+	.	ID=id475;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=livF;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	270952	272022	.	-	.	ID=gene239;Name=YE0235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0235
AM286415.1	EMBL	CDS	270952	272022	.	-	0	ID=cds224;Parent=gene239;Dbxref=EnsemblGenomes-Gn:YE0235,EnsemblGenomes-Tr:CAL10369,UniProtKB/TrEMBL:A1JID1,NCBI_GP:CAL10369.1;Name=CAL10369.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10369.1;transl_table=11
AM286415.1	EMBL	sequence_feature	271930	271998	.	-	.	ID=id476;Note=1 probable transmembrane helix predicted for YE0235 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	272084	272602	.	-	.	ID=gene240;Name=YE0236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0236
AM286415.1	EMBL	CDS	272084	272602	.	-	0	ID=cds225;Parent=gene240;Dbxref=EnsemblGenomes-Gn:YE0236,EnsemblGenomes-Tr:CAL10370,UniProtKB/TrEMBL:A1JID2,NCBI_GP:CAL10370.1;Name=CAL10370.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10370.1;transl_table=11
AM286415.1	EMBL	gene	272611	273240	.	-	.	ID=gene241;Name=YE0237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0237
AM286415.1	EMBL	CDS	272611	273240	.	-	0	ID=cds226;Parent=gene241;Dbxref=EnsemblGenomes-Gn:YE0237,EnsemblGenomes-Tr:CAL10371,InterPro:IPR008962,UniProtKB/TrEMBL:A1JID3,NCBI_GP:CAL10371.1;Name=CAL10371.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10371.1;transl_table=11
AM286415.1	EMBL	gene	273233	273919	.	-	.	ID=gene242;Name=YE0238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0238
AM286415.1	EMBL	CDS	273233	273919	.	-	0	ID=cds227;Parent=gene242;Dbxref=EnsemblGenomes-Gn:YE0238,EnsemblGenomes-Tr:CAL10372,InterPro:IPR008962,UniProtKB/TrEMBL:A1JID4,NCBI_GP:CAL10372.1;Name=CAL10372.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10372.1;transl_table=11
AM286415.1	EMBL	sequence_feature	273839	273907	.	-	.	ID=id477;Note=1 probable transmembrane helix predicted for YE0238 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	273937	276249	.	-	.	ID=gene243;Name=YE0239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0239
AM286415.1	EMBL	CDS	273937	276249	.	-	0	ID=cds228;Parent=gene243;Dbxref=EnsemblGenomes-Gn:YE0239,EnsemblGenomes-Tr:CAL10373,UniProtKB/TrEMBL:A1JID5,NCBI_GP:CAL10373.1;Name=CAL10373.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10373.1;transl_table=11
AM286415.1	EMBL	sequence_feature	273940	273951	.	-	.	ID=id478;Note=PS00294 Prenyl group binding site (CAAX box).;gbkey=misc_feature;inference=protein motif:Prosite:PS00294
AM286415.1	EMBL	sequence_feature	275722	275745	.	-	.	ID=id479;Note=PS00030 Eukaryotic putative RNA-binding region RNP-1 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00030
AM286415.1	EMBL	gene	276430	276906	.	-	.	ID=gene244;Name=YE0240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0240
AM286415.1	EMBL	CDS	276430	276906	.	-	0	ID=cds229;Parent=gene244;Dbxref=EnsemblGenomes-Gn:YE0240,EnsemblGenomes-Tr:CAL10374,GOA:A1JID6,InterPro:IPR007540,UniProtKB/TrEMBL:A1JID6,NCBI_GP:CAL10374.1;Name=CAL10374.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10374.1;transl_table=11
AM286415.1	EMBL	gene	277469	278788	.	+	.	ID=gene245;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=YE0241
AM286415.1	EMBL	CDS	277469	278788	.	+	0	ID=cds230;Parent=gene245;Dbxref=EnsemblGenomes-Gn:YE0241,EnsemblGenomes-Tr:CAL10375,GOA:A1JID7,InterPro:IPR006061,NCBI_GP:CAL10375.1;Name=CAL10375.1;gbkey=CDS;gene=ugpB;product=glycerol-3-phosphate-binding periplasmic protein;protein_id=CAL10375.1;transl_table=11
AM286415.1	EMBL	sequence_feature	277571	278731	.	+	.	ID=id480;Note=Pfam match to entry PF01547 SBP_bac_1%2C Bacterial extracellular solute-binding protein%2C score 217.0%2CE-value 1.9e-62;gbkey=misc_feature;gene=ugpB;inference=protein motif:PFAM:PF01547
AM286415.1	EMBL	sequence_feature	277892	277945	.	+	.	ID=id481;Note=PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature.;gbkey=misc_feature;gene=ugpB;inference=protein motif:Prosite:PS01037
AM286415.1	EMBL	gene	278898	279785	.	+	.	ID=gene246;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=YE0242
AM286415.1	EMBL	CDS	278898	279785	.	+	0	ID=cds231;Parent=gene246;Dbxref=EnsemblGenomes-Gn:YE0242,EnsemblGenomes-Tr:CAL10376,GOA:A1JID8,InterPro:IPR000515,NCBI_GP:CAL10376.1;Name=CAL10376.1;gbkey=CDS;gene=ugpA;product=sn-glycerol-3-phosphate transport system%2Cpermease protein;protein_id=CAL10376.1;transl_table=11
AM286415.1	EMBL	sequence_feature	278931	278999	.	+	.	ID=id482;Note=6 probable transmembrane helices predicted for YE0242 by TMHMM2.0 at aa 12-34%2C 72-94%2C 115-137%2C 157-179%2C206-228 and 266-288;gbkey=misc_feature;gene=ugpA;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	279111	279179	.	+	.	ID=id482;Note=6 probable transmembrane helices predicted for YE0242 by TMHMM2.0 at aa 12-34%2C 72-94%2C 115-137%2C 157-179%2C206-228 and 266-288;gbkey=misc_feature;gene=ugpA;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	279240	279308	.	+	.	ID=id482;Note=6 probable transmembrane helices predicted for YE0242 by TMHMM2.0 at aa 12-34%2C 72-94%2C 115-137%2C 157-179%2C206-228 and 266-288;gbkey=misc_feature;gene=ugpA;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	279366	279434	.	+	.	ID=id482;Note=6 probable transmembrane helices predicted for YE0242 by TMHMM2.0 at aa 12-34%2C 72-94%2C 115-137%2C 157-179%2C206-228 and 266-288;gbkey=misc_feature;gene=ugpA;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	279513	279581	.	+	.	ID=id482;Note=6 probable transmembrane helices predicted for YE0242 by TMHMM2.0 at aa 12-34%2C 72-94%2C 115-137%2C 157-179%2C206-228 and 266-288;gbkey=misc_feature;gene=ugpA;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	279693	279761	.	+	.	ID=id482;Note=6 probable transmembrane helices predicted for YE0242 by TMHMM2.0 at aa 12-34%2C 72-94%2C 115-137%2C 157-179%2C206-228 and 266-288;gbkey=misc_feature;gene=ugpA;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	279435	279662	.	+	.	ID=id483;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 73.6%2C E-value 2.7e-19;gbkey=misc_feature;gene=ugpA;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	279438	279524	.	+	.	ID=id484;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=ugpA;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	279782	280627	.	+	.	ID=gene247;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=YE0243
AM286415.1	EMBL	CDS	279782	280627	.	+	0	ID=cds232;Parent=gene247;Dbxref=EnsemblGenomes-Gn:YE0243,EnsemblGenomes-Tr:CAL10377,GOA:A1JID9,InterPro:IPR000515,NCBI_GP:CAL10377.1;Name=CAL10377.1;gbkey=CDS;gene=ugpE;product=sn-glycerol-3-phosphate transport system%2Cpermease protein;protein_id=CAL10377.1;transl_table=11
AM286415.1	EMBL	sequence_feature	279815	279883	.	+	.	ID=id485;Note=6 probable transmembrane helices predicted for YE0243 by TMHMM2.0 at aa 12-34%2C 82-104%2C 111-130%2C 145-167%2C188-210 and 251-273;gbkey=misc_feature;gene=ugpE;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	280025	280093	.	+	.	ID=id485;Note=6 probable transmembrane helices predicted for YE0243 by TMHMM2.0 at aa 12-34%2C 82-104%2C 111-130%2C 145-167%2C188-210 and 251-273;gbkey=misc_feature;gene=ugpE;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	280112	280171	.	+	.	ID=id485;Note=6 probable transmembrane helices predicted for YE0243 by TMHMM2.0 at aa 12-34%2C 82-104%2C 111-130%2C 145-167%2C188-210 and 251-273;gbkey=misc_feature;gene=ugpE;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	280214	280282	.	+	.	ID=id485;Note=6 probable transmembrane helices predicted for YE0243 by TMHMM2.0 at aa 12-34%2C 82-104%2C 111-130%2C 145-167%2C188-210 and 251-273;gbkey=misc_feature;gene=ugpE;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	280343	280411	.	+	.	ID=id485;Note=6 probable transmembrane helices predicted for YE0243 by TMHMM2.0 at aa 12-34%2C 82-104%2C 111-130%2C 145-167%2C188-210 and 251-273;gbkey=misc_feature;gene=ugpE;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	280532	280600	.	+	.	ID=id485;Note=6 probable transmembrane helices predicted for YE0243 by TMHMM2.0 at aa 12-34%2C 82-104%2C 111-130%2C 145-167%2C188-210 and 251-273;gbkey=misc_feature;gene=ugpE;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	280274	280510	.	+	.	ID=id486;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 64.6%2C E-value 1.4e-16;gbkey=misc_feature;gene=ugpE;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	280277	280363	.	+	.	ID=id487;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=ugpE;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	280634	281722	.	+	.	ID=gene248;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=YE0244
AM286415.1	EMBL	CDS	280634	281722	.	+	0	ID=cds233;Parent=gene248;Dbxref=EnsemblGenomes-Gn:YE0244,EnsemblGenomes-Tr:CAL10378,GOA:A1JIE0,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR012340,InterPro:IPR013611,InterPro:IPR017871,InterPro:IPR017922,InterPro:IPR027417,NCBI_GP:CAL10378.1;Name=CAL10378.1;gbkey=CDS;gene=ugpC;product=sn-glycerol-3-phosphate transport%2C ATP-binding protein;protein_id=CAL10378.1;transl_table=11
AM286415.1	EMBL	sequence_feature	280721	281266	.	+	.	ID=id488;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 223.4%2C E-value 2.2e-64;gbkey=misc_feature;gene=ugpC;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	280742	280765	.	+	.	ID=id489;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ugpC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	281036	281080	.	+	.	ID=id490;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=ugpC;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	281719	282459	.	+	.	ID=gene249;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=YE0245
AM286415.1	EMBL	CDS	281719	282459	.	+	0	ID=cds234;Parent=gene249;Dbxref=EnsemblGenomes-Gn:YE0245,EnsemblGenomes-Tr:CAL10379,GOA:A1JIE1,InterPro:IPR004129,InterPro:IPR017946,UniProtKB/TrEMBL:A1JIE1,NCBI_GP:CAL10379.1;Name=CAL10379.1;gbkey=CDS;gene=ugpQ;product=glycerophosphoryl diester phosphodiesterase;protein_id=CAL10379.1;transl_table=11
AM286415.1	EMBL	sequence_feature	281755	282447	.	+	.	ID=id491;Note=Pfam match to entry PF03009 GDPD%2C Glycerophosphoryl diester phosphodiesterase family%2C score 206.3%2C E-value 3e-59;gbkey=misc_feature;gene=ugpQ;inference=protein motif:PFAM:PF03009
AM286415.1	EMBL	gene	282591	283550	.	+	.	ID=gene250;Name=YE0246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0246
AM286415.1	EMBL	CDS	282591	283550	.	+	0	ID=cds235;Parent=gene250;Dbxref=EnsemblGenomes-Gn:YE0246,EnsemblGenomes-Tr:CAL10380,GOA:A1JIE2,InterPro:IPR004776,UniProtKB/TrEMBL:A1JIE2,NCBI_GP:CAL10380.1;Name=CAL10380.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10380.1;transl_table=11
AM286415.1	EMBL	sequence_feature	282624	282692	.	+	.	ID=id492;Note=9 probable transmembrane helices predicted for YE0246 by TMHMM2.0 at aa 12-34%2C 72-91%2C 104-126%2C 131-153%2C173-195%2C 205-227%2C 234-256%2C 260-282 and 295-317;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	282804	282863	.	+	.	ID=id492;Note=9 probable transmembrane helices predicted for YE0246 by TMHMM2.0 at aa 12-34%2C 72-91%2C 104-126%2C 131-153%2C173-195%2C 205-227%2C 234-256%2C 260-282 and 295-317;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	282900	282968	.	+	.	ID=id492;Note=9 probable transmembrane helices predicted for YE0246 by TMHMM2.0 at aa 12-34%2C 72-91%2C 104-126%2C 131-153%2C173-195%2C 205-227%2C 234-256%2C 260-282 and 295-317;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	282981	283049	.	+	.	ID=id492;Note=9 probable transmembrane helices predicted for YE0246 by TMHMM2.0 at aa 12-34%2C 72-91%2C 104-126%2C 131-153%2C173-195%2C 205-227%2C 234-256%2C 260-282 and 295-317;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	283107	283175	.	+	.	ID=id492;Note=9 probable transmembrane helices predicted for YE0246 by TMHMM2.0 at aa 12-34%2C 72-91%2C 104-126%2C 131-153%2C173-195%2C 205-227%2C 234-256%2C 260-282 and 295-317;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	283203	283271	.	+	.	ID=id492;Note=9 probable transmembrane helices predicted for YE0246 by TMHMM2.0 at aa 12-34%2C 72-91%2C 104-126%2C 131-153%2C173-195%2C 205-227%2C 234-256%2C 260-282 and 295-317;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	283290	283358	.	+	.	ID=id492;Note=9 probable transmembrane helices predicted for YE0246 by TMHMM2.0 at aa 12-34%2C 72-91%2C 104-126%2C 131-153%2C173-195%2C 205-227%2C 234-256%2C 260-282 and 295-317;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	283368	283436	.	+	.	ID=id492;Note=9 probable transmembrane helices predicted for YE0246 by TMHMM2.0 at aa 12-34%2C 72-91%2C 104-126%2C 131-153%2C173-195%2C 205-227%2C 234-256%2C 260-282 and 295-317;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	283473	283541	.	+	.	ID=id492;Note=9 probable transmembrane helices predicted for YE0246 by TMHMM2.0 at aa 12-34%2C 72-91%2C 104-126%2C 131-153%2C173-195%2C 205-227%2C 234-256%2C 260-282 and 295-317;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	282654	283043	.	+	.	ID=id493;Note=Pfam match to entry PF03547 Auxin_eff%2C Auxin Efflux Carrier%2C score 48.4%2C E-value 1e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF03547
AM286415.1	EMBL	gene	283705	284604	.	+	.	ID=gene251;Name=yigM;gbkey=Gene;gene=yigM;gene_biotype=protein_coding;locus_tag=YE0247
AM286415.1	EMBL	CDS	283705	284604	.	+	0	ID=cds236;Parent=gene251;Dbxref=EnsemblGenomes-Gn:YE0247,EnsemblGenomes-Tr:CAL10381,GOA:A1JIE3,InterPro:IPR000620,InterPro:IPR004779,UniProtKB/TrEMBL:A1JIE3,NCBI_GP:CAL10381.1;Name=CAL10381.1;gbkey=CDS;gene=yigM;product=putative membrane protein;protein_id=CAL10381.1;transl_table=11
AM286415.1	EMBL	sequence_feature	283708	283776	.	+	.	ID=id494;Note=10 probable transmembrane helices predicted for YE0247 by TMHMM2.0 at aa 2-24%2C 28-47%2C 52-74%2C 78-100%2C112-131%2C 136-158%2C 170-192%2C 202-224%2C 231-253 and 258-275;gbkey=misc_feature;gene=yigM;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	283786	283845	.	+	.	ID=id494;Note=10 probable transmembrane helices predicted for YE0247 by TMHMM2.0 at aa 2-24%2C 28-47%2C 52-74%2C 78-100%2C112-131%2C 136-158%2C 170-192%2C 202-224%2C 231-253 and 258-275;gbkey=misc_feature;gene=yigM;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	283858	283926	.	+	.	ID=id494;Note=10 probable transmembrane helices predicted for YE0247 by TMHMM2.0 at aa 2-24%2C 28-47%2C 52-74%2C 78-100%2C112-131%2C 136-158%2C 170-192%2C 202-224%2C 231-253 and 258-275;gbkey=misc_feature;gene=yigM;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	283936	284004	.	+	.	ID=id494;Note=10 probable transmembrane helices predicted for YE0247 by TMHMM2.0 at aa 2-24%2C 28-47%2C 52-74%2C 78-100%2C112-131%2C 136-158%2C 170-192%2C 202-224%2C 231-253 and 258-275;gbkey=misc_feature;gene=yigM;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	284038	284097	.	+	.	ID=id494;Note=10 probable transmembrane helices predicted for YE0247 by TMHMM2.0 at aa 2-24%2C 28-47%2C 52-74%2C 78-100%2C112-131%2C 136-158%2C 170-192%2C 202-224%2C 231-253 and 258-275;gbkey=misc_feature;gene=yigM;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	284110	284178	.	+	.	ID=id494;Note=10 probable transmembrane helices predicted for YE0247 by TMHMM2.0 at aa 2-24%2C 28-47%2C 52-74%2C 78-100%2C112-131%2C 136-158%2C 170-192%2C 202-224%2C 231-253 and 258-275;gbkey=misc_feature;gene=yigM;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	284212	284280	.	+	.	ID=id494;Note=10 probable transmembrane helices predicted for YE0247 by TMHMM2.0 at aa 2-24%2C 28-47%2C 52-74%2C 78-100%2C112-131%2C 136-158%2C 170-192%2C 202-224%2C 231-253 and 258-275;gbkey=misc_feature;gene=yigM;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	284308	284376	.	+	.	ID=id494;Note=10 probable transmembrane helices predicted for YE0247 by TMHMM2.0 at aa 2-24%2C 28-47%2C 52-74%2C 78-100%2C112-131%2C 136-158%2C 170-192%2C 202-224%2C 231-253 and 258-275;gbkey=misc_feature;gene=yigM;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	284395	284463	.	+	.	ID=id494;Note=10 probable transmembrane helices predicted for YE0247 by TMHMM2.0 at aa 2-24%2C 28-47%2C 52-74%2C 78-100%2C112-131%2C 136-158%2C 170-192%2C 202-224%2C 231-253 and 258-275;gbkey=misc_feature;gene=yigM;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	284476	284529	.	+	.	ID=id494;Note=10 probable transmembrane helices predicted for YE0247 by TMHMM2.0 at aa 2-24%2C 28-47%2C 52-74%2C 78-100%2C112-131%2C 136-158%2C 170-192%2C 202-224%2C 231-253 and 258-275;gbkey=misc_feature;gene=yigM;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	283729	284094	.	+	.	ID=id495;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 35.1%2C E-value 1.1e-07;gbkey=misc_feature;gene=yigM;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	284149	284535	.	+	.	ID=id496;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 47.3%2C E-value 2.2e-11;gbkey=misc_feature;gene=yigM;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	284492	285445	.	-	.	ID=gene252;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=YE0248
AM286415.1	EMBL	CDS	284492	285445	.	-	0	ID=cds237;Parent=gene252;Dbxref=EnsemblGenomes-Gn:YE0248,EnsemblGenomes-Tr:CAL10382,GOA:A1JIE4,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JIE4,NCBI_GP:CAL10382.1;Name=CAL10382.1;gbkey=CDS;gene=metR;product=lysR-family transcriptional regulatory protein;protein_id=CAL10382.1;transl_table=11
AM286415.1	EMBL	sequence_feature	284576	285196	.	-	.	ID=id497;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 159.7%2C E-value 3.3e-45;gbkey=misc_feature;gene=metR;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	285257	285436	.	-	.	ID=id498;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 84.8%2C E-value 1.1e-22;gbkey=misc_feature;gene=metR;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	285302	285394	.	-	.	ID=id499;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=metR;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	285332	285397	.	-	.	ID=id500;Note=Predicted helix-turn-helix motif with score 1683.000%2C SD 4.92 at aa 17-38%2C sequence GSLAAAATQLHQTQSALSHQFS;gbkey=misc_feature;gene=metR
AM286415.1	EMBL	gene	285551	287827	.	+	.	ID=gene253;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=YE0249
AM286415.1	EMBL	CDS	285551	287827	.	+	0	ID=cds238;Parent=gene253;Dbxref=EnsemblGenomes-Gn:YE0249,EnsemblGenomes-Tr:CAL10383,GOA:A1JIE5,InterPro:IPR002629,InterPro:IPR006276,InterPro:IPR013215,NCBI_GP:CAL10383.1;Name=CAL10383.1;gbkey=CDS;gene=metE;product=5-methyltetrahydropteroyltriglutamate--homocyst eine methyltransferase;protein_id=CAL10383.1;transl_table=11
AM286415.1	EMBL	sequence_feature	286835	287806	.	+	.	ID=id501;Note=Pfam match to entry PF01717 Methionine_synt%2CMethionine synthase%2C vitamin-B12 independent%2C score 769.0%2C E-value 1.3e-228;gbkey=misc_feature;gene=metE;inference=protein motif:PFAM:PF01717
AM286415.1	EMBL	gene	287893	288603	.	-	.	ID=gene254;Name=YE0250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0250
AM286415.1	EMBL	CDS	287893	288603	.	-	0	ID=cds239;Parent=gene254;Dbxref=EnsemblGenomes-Gn:YE0250,EnsemblGenomes-Tr:CAL10384,GOA:A1JIE6,InterPro:IPR002925,InterPro:IPR029058,UniProtKB/TrEMBL:A1JIE6,NCBI_GP:CAL10384.1;Name=CAL10384.1;gbkey=CDS;product=putative carboxymethylenebutenolidase;protein_id=CAL10384.1;transl_table=11
AM286415.1	EMBL	sequence_feature	287929	288603	.	-	.	ID=id502;Note=Pfam match to entry PF01738 DLH%2C Dienelactone hydrolase family%2C score 336.2%2C E-value 2.3e-98;gbkey=misc_feature;inference=protein motif:PFAM:PF01738
AM286415.1	EMBL	gene	289388	290149	.	+	.	ID=gene255;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=YE0251
AM286415.1	EMBL	CDS	289388	290149	.	+	0	ID=cds240;Parent=gene255;Dbxref=EnsemblGenomes-Gn:YE0251,EnsemblGenomes-Tr:CAL10385,GOA:A1JIE7,InterPro:IPR000845,InterPro:IPR010058,InterPro:IPR018016,InterPro:IPR018017,UniProtKB/TrEMBL:A1JIE7,NCBI_GP:CAL10385.1;Name=CAL10385.1;gbkey=CDS;gene=udp;product=uridine phosphorylase;protein_id=CAL10385.1;transl_table=11
AM286415.1	EMBL	sequence_feature	289445	290134	.	+	.	ID=id503;Note=Pfam match to entry PF01048 PNP_UDP_1%2CPhosphorylase family%2C score 375.3%2C E-value 4e-110;gbkey=misc_feature;gene=udp;inference=protein motif:PFAM:PF01048
AM286415.1	EMBL	sequence_feature	289583	289630	.	+	.	ID=id504;Note=PS01232 Purine and other phosphorylases family 1 signature.;gbkey=misc_feature;gene=udp;inference=protein motif:Prosite:PS01232
AM286415.1	EMBL	gene	290482	291279	.	+	.	ID=gene256;Name=YE0252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0252
AM286415.1	EMBL	CDS	290482	291279	.	+	0	ID=cds241;Parent=gene256;Dbxref=EnsemblGenomes-Gn:YE0252,EnsemblGenomes-Tr:CAL10386,InterPro:IPR025163,InterPro:IPR026893,InterPro:IPR029021,UniProtKB/TrEMBL:A1JIE8,NCBI_GP:CAL10386.1;Name=CAL10386.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10386.1;transl_table=11
AM286415.1	EMBL	gene	291621	293438	.	+	.	ID=gene257;Name=YE0253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0253
AM286415.1	EMBL	CDS	291621	293438	.	+	0	ID=cds242;Parent=gene257;Dbxref=EnsemblGenomes-Gn:YE0253,EnsemblGenomes-Tr:CAL10387,GOA:A1JIE9,InterPro:IPR003706,InterPro:IPR025299,UniProtKB/TrEMBL:A1JIE9,NCBI_GP:CAL10387.1;Name=CAL10387.1;gbkey=CDS;product=putative carbon starvation protein;protein_id=CAL10387.1;transl_table=11
AM286415.1	EMBL	sequence_feature	291630	291698	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/15
AM286415.1	EMBL	sequence_feature	291801	291869	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/15
AM286415.1	EMBL	sequence_feature	291882	291950	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/15
AM286415.1	EMBL	sequence_feature	292008	292076	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/15
AM286415.1	EMBL	sequence_feature	292104	292163	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/15
AM286415.1	EMBL	sequence_feature	292188	292247	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/15
AM286415.1	EMBL	sequence_feature	292290	292355	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/15
AM286415.1	EMBL	sequence_feature	292389	292457	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/15
AM286415.1	EMBL	sequence_feature	292500	292568	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/15
AM286415.1	EMBL	sequence_feature	292605	292673	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/15
AM286415.1	EMBL	sequence_feature	292857	292925	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/15
AM286415.1	EMBL	sequence_feature	293010	293069	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/15
AM286415.1	EMBL	sequence_feature	293097	293165	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/15
AM286415.1	EMBL	sequence_feature	293184	293252	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=14/15
AM286415.1	EMBL	sequence_feature	293295	293363	.	+	.	ID=id505;Note=15 probable transmembrane helices predicted for YE0253 by TMHMM2.0 at aa 4-26%2C 61-83%2C 88-110%2C 130-152%2C162-181%2C 190-209%2C 224-245%2C 257-279%2C 294-316%2C 329-351%2C413-435%2C 464-483%2C 493-515%2C 522-544 and 559-581;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=15/15
AM286415.1	EMBL	sequence_feature	291630	292781	.	+	.	ID=id506;Note=Pfam match to entry PF02554 CstA%2C Carbon starvation protein CstA%2C score 696.4%2C E-value 9.2e-207;gbkey=misc_feature;inference=protein motif:PFAM:PF02554
AM286415.1	EMBL	sequence_feature	291633	291665	.	+	.	ID=id507;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	291876	291908	.	+	.	ID=id508;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	292500	292532	.	+	.	ID=id509;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	293016	293048	.	+	.	ID=id510;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	293567	294097	.	+	.	ID=gene258;Name=YE0254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0254
AM286415.1	EMBL	CDS	293567	294097	.	+	0	ID=cds243;Parent=gene258;Dbxref=EnsemblGenomes-Gn:YE0254,EnsemblGenomes-Tr:CAL10388,InterPro:IPR015414,UniProtKB/TrEMBL:A1JIF0,NCBI_GP:CAL10388.1;Name=CAL10388.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10388.1;transl_table=11
AM286415.1	EMBL	sequence_feature	293633	294091	.	+	.	ID=id511;Note=Pfam match to entry PF00597 DedA%2C DedA family %2Cscore 72.7%2C E-value 4.9e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00597
AM286415.1	EMBL	sequence_feature	293636	293704	.	+	.	ID=id512;Note=4 probable transmembrane helices predicted for YE0254 by TMHMM2.0 at aa 24-46%2C 61-83%2C 115-137 and 152-174;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	293747	293815	.	+	.	ID=id512;Note=4 probable transmembrane helices predicted for YE0254 by TMHMM2.0 at aa 24-46%2C 61-83%2C 115-137 and 152-174;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	293909	293977	.	+	.	ID=id512;Note=4 probable transmembrane helices predicted for YE0254 by TMHMM2.0 at aa 24-46%2C 61-83%2C 115-137 and 152-174;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	294020	294088	.	+	.	ID=id512;Note=4 probable transmembrane helices predicted for YE0254 by TMHMM2.0 at aa 24-46%2C 61-83%2C 115-137 and 152-174;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	294370	295824	.	+	.	ID=gene259;Name=rumC;gbkey=Gene;gene=rumC;gene_biotype=protein_coding;locus_tag=YE0255
AM286415.1	EMBL	CDS	294370	295824	.	+	0	ID=cds244;Parent=gene259;Dbxref=EnsemblGenomes-Gn:YE0255,EnsemblGenomes-Tr:CAL10389,InterPro:IPR003798,UniProtKB/TrEMBL:A1JIF1,NCBI_GP:CAL10389.1;Name=CAL10389.1;gbkey=CDS;gene=rumC;product=putative DNA recombination protein;protein_id=CAL10389.1;transl_table=11
AM286415.1	EMBL	sequence_feature	294718	295770	.	+	.	ID=id513;Note=Pfam match to entry PF02646 DUF195%2C Uncharacterized BCR%2C YigN family%2C COG1322%2C score 615.2%2C E-value 2.4e-182;gbkey=misc_feature;gene=rumC;inference=protein motif:PFAM:PF02646
AM286415.1	EMBL	sequence_feature	295459	295524	.	+	.	ID=id514;Note=Predicted helix-turn-helix motif with score 998.000%2C SD 2.59 at aa 364-385%2C sequence RTITNLWRYEHQSQNAQRIAER;gbkey=misc_feature;gene=rumC
AM286415.1	EMBL	gene	295958	296713	.	+	.	ID=gene260;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=YE0256
AM286415.1	EMBL	CDS	295958	296713	.	+	0	ID=cds245;Parent=gene260;Dbxref=EnsemblGenomes-Gn:YE0256,EnsemblGenomes-Tr:CAL10390,GOA:A1JIF2,InterPro:IPR004033,InterPro:IPR023576,InterPro:IPR029063,NCBI_GP:CAL10390.1;Name=CAL10390.1;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis methyltransferase;protein_id=CAL10390.1;transl_table=11
AM286415.1	EMBL	sequence_feature	295997	296707	.	+	.	ID=id515;Note=Pfam match to entry PF01209 Ubie_methyltran%2CubiE/COQ5 methyltransferase family%2C score 531.6%2C E-value 3.6e-157;gbkey=misc_feature;gene=ubiE;inference=protein motif:PFAM:PF01209
AM286415.1	EMBL	sequence_feature	296063	296110	.	+	.	ID=id516;Note=PS01183 ubiE/COQ5 methyltransferase family signature 1.;gbkey=misc_feature;gene=ubiE;inference=protein motif:Prosite:PS01183
AM286415.1	EMBL	sequence_feature	296429	296473	.	+	.	ID=id517;Note=PS01184 ubiE/COQ5 methyltransferase family signature 2.;gbkey=misc_feature;gene=ubiE;inference=protein motif:Prosite:PS01184
AM286415.1	EMBL	gene	296757	297380	.	+	.	ID=gene261;Name=YE0257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0257
AM286415.1	EMBL	CDS	296757	297380	.	+	0	ID=cds246;Parent=gene261;Dbxref=EnsemblGenomes-Gn:YE0257,EnsemblGenomes-Tr:CAL10391,InterPro:IPR003033,UniProtKB/TrEMBL:A1JIF3,NCBI_GP:CAL10391.1;Name=CAL10391.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10391.1;transl_table=11
AM286415.1	EMBL	gene	297377	299008	.	+	.	ID=gene262;Name=aarF;gbkey=Gene;gene=aarF;gene_biotype=protein_coding;locus_tag=YE0258
AM286415.1	EMBL	CDS	297377	299008	.	+	0	ID=cds247;Parent=gene262;Dbxref=EnsemblGenomes-Gn:YE0258,EnsemblGenomes-Tr:CAL10392,GOA:A1JIF4,InterPro:IPR004147,InterPro:IPR010232,InterPro:IPR011009,NCBI_GP:CAL10392.1;Name=CAL10392.1;gbkey=CDS;gene=aarF;product=ubiquinone biosynthesis protein;protein_id=CAL10392.1;transl_table=11
AM286415.1	EMBL	sequence_feature	297707	298069	.	+	.	ID=id518;Note=Pfam match to entry PF03109 ABC1%2C ABC1 family %2Cscore 194.8%2C E-value 8.8e-56;gbkey=misc_feature;gene=aarF;inference=protein motif:PFAM:PF03109
AM286415.1	EMBL	sequence_feature	298925	298993	.	+	.	ID=id519;Note=1 probable transmembrane helix predicted for YE0258 by TMHMM2.0 at aa 517-539;gbkey=misc_feature;gene=aarF;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	299209	299475	.	+	.	ID=gene263;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;gene_synonym=b3836,mtta1;locus_tag=YE0259
AM286415.1	EMBL	CDS	299209	299475	.	+	0	ID=cds248;Parent=gene263;Dbxref=EnsemblGenomes-Gn:YE0259,EnsemblGenomes-Tr:CAL10393,GOA:A1JIF5,InterPro:IPR003369,InterPro:IPR006312,UniProtKB/TrEMBL:A1JIF5,NCBI_GP:CAL10393.1;Name=CAL10393.1;gbkey=CDS;gene=tatA;product=Sec-independent protein translocase protein TatA;protein_id=CAL10393.1;transl_table=11
AM286415.1	EMBL	sequence_feature	299218	299406	.	+	.	ID=id520;Note=Pfam match to entry PF02416 MttA_Hcf106%2CmttA/Hcf106 family%2C score 38.9%2C E-value 7.4e-09;gbkey=misc_feature;gene=tatA;inference=protein motif:PFAM:PF02416
AM286415.1	EMBL	sequence_feature	299218	299271	.	+	.	ID=id521;Note=1 probable transmembrane helix predicted for YE0259 by TMHMM2.0 at aa 4-21;gbkey=misc_feature;gene=tatA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	299479	300135	.	+	.	ID=gene264;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;gene_synonym=mtta2;locus_tag=YE0260
AM286415.1	EMBL	CDS	299479	300135	.	+	0	ID=cds249;Parent=gene264;Dbxref=EnsemblGenomes-Gn:YE0260,EnsemblGenomes-Tr:CAL10394,GOA:A1JIF6,InterPro:IPR003998,InterPro:IPR018448,NCBI_GP:CAL10394.1;Name=CAL10394.1;gbkey=CDS;gene=tatB;product=Sec-independent protein translocase protein TatB;protein_id=CAL10394.1;transl_table=11
AM286415.1	EMBL	sequence_feature	299488	299688	.	+	.	ID=id522;Note=Pfam match to entry PF02416 MttA_Hcf106%2CmttA/Hcf106 family%2C score 7.5%2C E-value 0.00068;gbkey=misc_feature;gene=tatB;inference=protein motif:PFAM:PF02416
AM286415.1	EMBL	gene	300138	300917	.	+	.	ID=gene265;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;gene_synonym=mttB;locus_tag=YE0261
AM286415.1	EMBL	CDS	300138	300917	.	+	0	ID=cds250;Parent=gene265;Dbxref=EnsemblGenomes-Gn:YE0261,EnsemblGenomes-Tr:CAL10395,GOA:A1JIF7,InterPro:IPR002033,InterPro:IPR019820,UniProtKB/TrEMBL:A1JIF7,NCBI_GP:CAL10395.1;Name=CAL10395.1;gbkey=CDS;gene=tatC;product=Sec-independent protein translocase protein TatC;protein_id=CAL10395.1;transl_table=11
AM286415.1	EMBL	sequence_feature	300189	300800	.	+	.	ID=id523;Note=Pfam match to entry PF00902 UPF0032%2C MttB family UPF0032%2C score 327.6%2C E-value 9.5e-96;gbkey=misc_feature;gene=tatC;inference=protein motif:PFAM:PF00902
AM286415.1	EMBL	sequence_feature	300195	300263	.	+	.	ID=id524;Note=6 probable transmembrane helices predicted for YE0261 by TMHMM2.0 at aa 20-42%2C 74-96%2C 116-138%2C 158-180%2C193-210 and 214-236;gbkey=misc_feature;gene=tatC;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	300357	300425	.	+	.	ID=id524;Note=6 probable transmembrane helices predicted for YE0261 by TMHMM2.0 at aa 20-42%2C 74-96%2C 116-138%2C 158-180%2C193-210 and 214-236;gbkey=misc_feature;gene=tatC;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	300483	300551	.	+	.	ID=id524;Note=6 probable transmembrane helices predicted for YE0261 by TMHMM2.0 at aa 20-42%2C 74-96%2C 116-138%2C 158-180%2C193-210 and 214-236;gbkey=misc_feature;gene=tatC;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	300609	300677	.	+	.	ID=id524;Note=6 probable transmembrane helices predicted for YE0261 by TMHMM2.0 at aa 20-42%2C 74-96%2C 116-138%2C 158-180%2C193-210 and 214-236;gbkey=misc_feature;gene=tatC;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	300714	300767	.	+	.	ID=id524;Note=6 probable transmembrane helices predicted for YE0261 by TMHMM2.0 at aa 20-42%2C 74-96%2C 116-138%2C 158-180%2C193-210 and 214-236;gbkey=misc_feature;gene=tatC;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	300777	300845	.	+	.	ID=id524;Note=6 probable transmembrane helices predicted for YE0261 by TMHMM2.0 at aa 20-42%2C 74-96%2C 116-138%2C 158-180%2C193-210 and 214-236;gbkey=misc_feature;gene=tatC;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	300597	300656	.	+	.	ID=id525;Note=PS01218 Uncharacterized protein family UPF0032 signature.;gbkey=misc_feature;gene=tatC;inference=protein motif:Prosite:PS01218
AM286415.1	EMBL	gene	300973	301755	.	+	.	ID=gene266;Name=tatD;gbkey=Gene;gene=tatD;gene_biotype=protein_coding;gene_synonym=mttC;locus_tag=YE0262
AM286415.1	EMBL	CDS	300973	301755	.	+	0	ID=cds251;Parent=gene266;Dbxref=EnsemblGenomes-Gn:YE0262,EnsemblGenomes-Tr:CAL10396,NCBI_GP:CAL10396.1;Name=CAL10396.1;gbkey=CDS;gene=tatD;product=deoxyribonuclease TatD (pseudogene);protein_id=CAL10396.1;transl_table=11
AM286415.1	EMBL	sequence_feature	300988	301746	.	+	.	ID=id526;Note=Pfam match to entry PF01026 TatD_DNase%2C TatD related DNase%2C score 331.5%2C E-value 6.2e-97;gbkey=misc_feature;gene=tatD;inference=protein motif:PFAM:PF01026
AM286415.1	EMBL	sequence_feature	301342	301374	.	+	.	ID=id527;Note=PS01090 Uncharacterized protein family UPF0006 signature 2.;gbkey=misc_feature;gene=tatD;inference=protein motif:Prosite:PS01090
AM286415.1	EMBL	sequence_feature	301540	301590	.	+	.	ID=id528;Note=PS01091 Uncharacterized protein family UPF0006 signature 3.;gbkey=misc_feature;gene=tatD;inference=protein motif:Prosite:PS01091
AM286415.1	EMBL	gene	301770	302792	.	+	.	ID=gene267;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;gene_synonym=ncf;locus_tag=YE0263
AM286415.1	EMBL	CDS	301770	302792	.	+	0	ID=cds252;Parent=gene267;Dbxref=EnsemblGenomes-Gn:YE0263,EnsemblGenomes-Tr:CAL10397,GOA:A1JIF9,InterPro:IPR001731,InterPro:IPR013785,UniProtKB/TrEMBL:A1JIF9,NCBI_GP:CAL10397.1;Name=CAL10397.1;gbkey=CDS;gene=hemB;product=delta-aminolevulinic acid dehydratase;protein_id=CAL10397.1;transl_table=11
AM286415.1	EMBL	sequence_feature	301779	302771	.	+	.	ID=id529;Note=Pfam match to entry PF00490 ALAD%2CDelta-aminolevulinic acid dehydratase%2C score 663.1%2CE-value 9.4e-197;gbkey=misc_feature;gene=hemB;inference=protein motif:PFAM:PF00490
AM286415.1	EMBL	sequence_feature	302523	302561	.	+	.	ID=id530;Note=PS00169 Delta-aminolevulinic acid dehydratase active site.;gbkey=misc_feature;gene=hemB;inference=protein motif:Prosite:PS00169
AM286415.1	EMBL	gene	302881	303369	.	-	.	ID=gene268;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;gene_synonym=hlyT,sfrB;locus_tag=YE0264
AM286415.1	EMBL	CDS	302881	303369	.	-	0	ID=cds253;Parent=gene268;Dbxref=EnsemblGenomes-Gn:YE0264,EnsemblGenomes-Tr:CAL10398,GOA:A1JIG0,InterPro:IPR005824,InterPro:IPR006645,InterPro:IPR010215,UniProtKB/TrEMBL:A1JIG0,NCBI_GP:CAL10398.1;Name=CAL10398.1;gbkey=CDS;gene=rfaH;product=putative regulatory protein;protein_id=CAL10398.1;transl_table=11
AM286415.1	EMBL	gene	303638	305134	.	+	.	ID=gene269;Name=YE0265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0265
AM286415.1	EMBL	CDS	303638	305134	.	+	0	ID=cds254;Parent=gene269;Dbxref=EnsemblGenomes-Gn:YE0265,EnsemblGenomes-Tr:CAL10399,GOA:A1JIG1,InterPro:IPR002830,InterPro:IPR012349,InterPro:IPR023677,NCBI_GP:CAL10399.1;Name=CAL10399.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10399.1;transl_table=11
AM286415.1	EMBL	sequence_feature	303674	304948	.	+	.	ID=id531;Note=Pfam match to entry PF01977 UPF0096%2C VdcC family %2Cscore 820.0%2C E-value 5.6e-244;gbkey=misc_feature;inference=protein motif:PFAM:PF01977
AM286415.1	EMBL	gene	305189	305890	.	+	.	ID=gene270;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;gene_synonym=flrD,fre,fsrC,ubiB;locus_tag=YE0266
AM286415.1	EMBL	CDS	305189	305890	.	+	0	ID=cds255;Parent=gene270;Dbxref=EnsemblGenomes-Gn:YE0266,EnsemblGenomes-Tr:CAL10400,GOA:A1JIG2,InterPro:IPR001221,InterPro:IPR001433,InterPro:IPR008333,InterPro:IPR017927,InterPro:IPR017938,UniProtKB/TrEMBL:A1JIG2,NCBI_GP:CAL10400.1;Name=CAL10400.1;gbkey=CDS;gene=fadI;product=NAD(P)H-flavin reductase;protein_id=CAL10400.1;transl_table=11
AM286415.1	EMBL	sequence_feature	305201	305479	.	+	.	ID=id532;Note=Pfam match to entry PF00970 FAD_binding_6%2COxidoreductase FAD-binding domain%2C score 11.9%2C E-value 6e-05;gbkey=misc_feature;gene=fadI;inference=protein motif:PFAM:PF00970
AM286415.1	EMBL	sequence_feature	305495	305827	.	+	.	ID=id533;Note=Pfam match to entry PF00175 NAD_binding_1%2COxidoreductase NAD-binding domain%2C score 125.7%2C E-value 5.5e-35;gbkey=misc_feature;gene=fadI;inference=protein motif:PFAM:PF00175
AM286415.1	EMBL	gene	305990	307153	.	-	.	ID=gene271;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;gene_synonym=oldA;locus_tag=YE0267
AM286415.1	EMBL	CDS	305990	307153	.	-	0	ID=cds256;Parent=gene271;Dbxref=EnsemblGenomes-Gn:YE0267,EnsemblGenomes-Tr:CAL10401,GOA:A1JIG3,InterPro:IPR002155,InterPro:IPR012805,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR020610,InterPro:IPR020613,InterPro:IPR020615,InterPro:IPR020616,InterPro:IPR020617,NCBI_GP:CAL10401.1;Name=CAL10401.1;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=CAL10401.1;transl_table=11
AM286415.1	EMBL	sequence_feature	305996	306379	.	-	.	ID=id534;Note=Pfam match to entry PF02803 thiolase_C%2C Thiolase%2CC-terminal domain%2C score 271.4%2C E-value 7.5e-79;gbkey=misc_feature;gene=fadA;inference=protein motif:PFAM:PF02803
AM286415.1	EMBL	sequence_feature	306011	306052	.	-	.	ID=id535;Note=PS00099 Thiolases active site.;gbkey=misc_feature;gene=fadA;inference=protein motif:Prosite:PS00099
AM286415.1	EMBL	sequence_feature	306107	306157	.	-	.	ID=id536;Note=PS00737 Thiolases signature 2.;gbkey=misc_feature;gene=fadA;inference=protein motif:Prosite:PS00737
AM286415.1	EMBL	sequence_feature	306392	307153	.	-	.	ID=id537;Note=Pfam match to entry PF00108 thiolase%2C Thiolase%2CN-terminal domain%2C score 432.9%2C E-value 1.8e-127;gbkey=misc_feature;gene=fadA;inference=protein motif:PFAM:PF00108
AM286415.1	EMBL	sequence_feature	306440	306472	.	-	.	ID=id538;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=fadA;inference=protein motif:Prosite:PS00178
AM286415.1	EMBL	sequence_feature	306839	306895	.	-	.	ID=id539;Note=PS00098 Thiolases acyl-enzyme intermediate signature.;gbkey=misc_feature;gene=fadA;inference=protein motif:Prosite:PS00098
AM286415.1	EMBL	gene	307165	309354	.	-	.	ID=gene272;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;gene_synonym=oldB;locus_tag=YE0268
AM286415.1	EMBL	CDS	307165	309354	.	-	0	ID=cds257;Parent=gene272;Dbxref=EnsemblGenomes-Gn:YE0268,EnsemblGenomes-Tr:CAL10402,GOA:A1JIG4,InterPro:IPR001753,InterPro:IPR006108,InterPro:IPR006176,InterPro:IPR006180,InterPro:IPR008927,InterPro:IPR012799,InterPro:IPR013328,InterPro:IPR016040,InterPro:IPR018376,InterPro:IPR029045,NCBI_GP:CAL10402.1;Name=CAL10402.1;gbkey=CDS;gene=fadB;product=fatty acid oxidation complex alpha subunit;protein_id=CAL10402.1;transl_table=11
AM286415.1	EMBL	sequence_feature	307579	307869	.	-	.	ID=id540;Note=Pfam match to entry PF00725 3HCDH%2C3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain%2C score 130.6%2C E-value 1.9e-36;gbkey=misc_feature;gene=fadB;inference=protein motif:PFAM:PF00725
AM286415.1	EMBL	sequence_feature	307804	307878	.	-	.	ID=id541;Note=PS00067 3-hydroxyacyl-CoA dehydrogenase signature.;gbkey=misc_feature;gene=fadB;inference=protein motif:Prosite:PS00067
AM286415.1	EMBL	sequence_feature	307873	308427	.	-	.	ID=id542;Note=Pfam match to entry PF02737 3HCDH_N%2C3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain %2Cscore 348.3%2C E-value 5.5e-102;gbkey=misc_feature;gene=fadB;inference=protein motif:PFAM:PF02737
AM286415.1	EMBL	sequence_feature	308788	309303	.	-	.	ID=id543;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 280.2%2C E-value 1.7e-81;gbkey=misc_feature;gene=fadB;inference=protein motif:PFAM:PF00378
AM286415.1	EMBL	sequence_feature	308977	309039	.	-	.	ID=id544;Note=PS00166 Enoyl-CoA hydratase/isomerase signature.;gbkey=misc_feature;gene=fadB;inference=protein motif:Prosite:PS00166
AM286415.1	EMBL	sequence_feature	309001	309033	.	-	.	ID=id545;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=fadB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	309626	310975	.	+	.	ID=gene273;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=YE0269
AM286415.1	EMBL	CDS	309626	310975	.	+	0	ID=cds258;Parent=gene273;Dbxref=EnsemblGenomes-Gn:YE0269,EnsemblGenomes-Tr:CAL10403,GOA:A1JIG5,InterPro:IPR000994,InterPro:IPR001131,InterPro:IPR022846,NCBI_GP:CAL10403.1;Name=CAL10403.1;gbkey=CDS;gene=pepQ;product=proline dipeptidase;protein_id=CAL10403.1;transl_table=11
AM286415.1	EMBL	sequence_feature	310103	310945	.	+	.	ID=id546;Note=Pfam match to entry PF00557 Peptidase_M24%2Cmetallopeptidase family M24%2C score 254.0%2C E-value 1.4e-73;gbkey=misc_feature;gene=pepQ;inference=protein motif:PFAM:PF00557
AM286415.1	EMBL	sequence_feature	310646	310684	.	+	.	ID=id547;Note=PS00491 Aminopeptidase P and proline dipeptidase signature.;gbkey=misc_feature;gene=pepQ;inference=protein motif:Prosite:PS00491
AM286415.1	EMBL	pseudogene	310975	311253	.	+	.	ID=gene274;Name=YE0270;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE0270;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	311257	311589	.	+	.	ID=gene274;Name=YE0270;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE0270;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	310975	311253	.	+	0	ID=cds259;Parent=gene274;Dbxref=PSEUDO:CAL10404.1;Note=Similar to many proteins of undefined function including: Escherichia coli hypothetical protein YigZ or b3848 SWALL:YIGZ_ECOLI (SWALL:P27862) (204 aa) fasta scores: E(): 3.1e-46%2C 62.25 38d in 204 aa and to Arabidopsis thaliana hypothetical protein SWALL:AAM63017 (EMBL:AY085801) (234 aa) fasta scores: E(): 1.7e-15%2C38.85 38d in 157 aa. Note this CDS contains a stop codon after codon 93.;gbkey=CDS;inference=similar to sequence:UniProtKB:P27862;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	311257	311589	.	+	0	ID=cds259;Parent=gene274;Dbxref=PSEUDO:CAL10404.1;Note=Similar to many proteins of undefined function including: Escherichia coli hypothetical protein YigZ or b3848 SWALL:YIGZ_ECOLI (SWALL:P27862) (204 aa) fasta scores: E(): 3.1e-46%2C 62.25 38d in 204 aa and to Arabidopsis thaliana hypothetical protein SWALL:AAM63017 (EMBL:AY085801) (234 aa) fasta scores: E(): 1.7e-15%2C38.85 38d in 157 aa. Note this CDS contains a stop codon after codon 93.;gbkey=CDS;inference=similar to sequence:UniProtKB:P27862;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	311023	311253	.	+	.	ID=id548;Note=Pfam match to entry PF01205 UPF0029%2CUncharacterized protein family UPF0029%2C score 56.0%2CE-value 5.4e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF01205
AM286415.1	EMBL	sequence_feature	311242	311253	.	+	.	ID=id549;Note=PS00294 Prenyl group binding site (CAAX box).;gbkey=misc_feature;inference=protein motif:Prosite:PS00294
AM286415.1	EMBL	sequence_feature	311269	311361	.	+	.	ID=id550;Note=Pfam match to entry PF01205 UPF0029%2CUncharacterized protein family UPF0029%2C score 48.1%2CE-value 1.5e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF01205
AM286415.1	EMBL	gene	311626	313077	.	+	.	ID=gene275;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=YE0272
AM286415.1	EMBL	CDS	311626	313077	.	+	0	ID=cds260;Parent=gene275;Dbxref=EnsemblGenomes-Gn:YE0272,EnsemblGenomes-Tr:CAL10405,GOA:A1JIG7,InterPro:IPR003445,InterPro:IPR004772,UniProtKB/TrEMBL:A1JIG7,NCBI_GP:CAL10405.1;Name=CAL10405.1;gbkey=CDS;gene=trkH;product=Trk system potassium uptake protein TrkH;protein_id=CAL10405.1;transl_table=11
AM286415.1	EMBL	sequence_feature	311650	311718	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	311728	311796	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	311830	311898	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	312022	312090	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	312178	312246	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	312337	312405	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	312442	312510	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	312616	312684	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	312811	312879	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	312889	312957	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	312991	313059	.	+	.	ID=id551;Note=11 probable transmembrane helices predicted for YE0272 by TMHMM2.0 at aa 9-31%2C 35-57%2C 69-91%2C 133-155%2C185-207%2C 238-260%2C 273-295%2C 331-353%2C 396-418%2C 422-444 and 456-478;gbkey=misc_feature;gene=trkH;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	311812	313068	.	+	.	ID=id552;Note=Pfam match to entry PF02386 TrkH%2C Cation transport protein%2C score 539.5%2C E-value 1.5e-159;gbkey=misc_feature;gene=trkH;inference=protein motif:PFAM:PF02386
AM286415.1	EMBL	sequence_feature	312181	312213	.	+	.	ID=id553;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=trkH;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	312346	312378	.	+	.	ID=id554;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=trkH;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	313099	313632	.	+	.	ID=gene276;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=YE0273
AM286415.1	EMBL	CDS	313099	313632	.	+	0	ID=cds261;Parent=gene276;Dbxref=EnsemblGenomes-Gn:YE0273,EnsemblGenomes-Tr:CAL10406,GOA:A1JIG8,InterPro:IPR001226,InterPro:IPR008254,InterPro:IPR026816,InterPro:IPR029039,UniProtKB/TrEMBL:A1JIG8,NCBI_GP:CAL10406.1;Name=CAL10406.1;gbkey=CDS;gene=hemG;product=protoporphyrinogen oxidase;protein_id=CAL10406.1;transl_table=11
AM286415.1	EMBL	sequence_feature	313102	313224	.	+	.	ID=id555;Note=Pfam match to entry PF00258 flavodoxin%2C Flavodoxin%2C score 18.4%2C E-value 1.9e-05;gbkey=misc_feature;gene=hemG;inference=protein motif:PFAM:PF00258
AM286415.1	EMBL	sequence_feature	313111	313161	.	+	.	ID=id556;Note=PS00201 Flavodoxin signature.;gbkey=misc_feature;gene=hemG;inference=protein motif:Prosite:PS00201
AM286415.1	EMBL	gene	314127	315615	.	+	.	ID=gene277;Name=16S rRNA;gbkey=Gene;gene=16S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	314127	315615	.	+	.	ID=rna18;Parent=gene277;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	exon	314127	315615	.	+	.	ID=id557;Parent=rna18;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	gene	315840	315915	.	+	.	ID=gene278;Name=tRNA-Glu (TTC);gbkey=Gene;gene=tRNA-Glu (TTC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	315840	315915	.	+	.	ID=rna19;Parent=gene278;gbkey=tRNA;gene=tRNA-Glu (TTC);product=tRNA-Glu
AM286415.1	EMBL	exon	315840	315915	.	+	.	ID=id558;Parent=rna19;gbkey=tRNA;gene=tRNA-Glu (TTC);product=tRNA-Glu
AM286415.1	EMBL	gene	316294	319287	.	+	.	ID=gene279;Name=23S rRNA;gbkey=Gene;gene=23S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	316294	319287	.	+	.	ID=rna20;Parent=gene279;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	exon	316294	319287	.	+	.	ID=id559;Parent=rna20;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	gene	319287	319527	.	+	.	ID=gene280;Name=5S rRNA;gbkey=Gene;gene=5S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	319287	319527	.	+	.	ID=rna21;Parent=gene280;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	exon	319287	319527	.	+	.	ID=id560;Parent=rna21;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	gene	319709	320746	.	+	.	ID=gene281;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=YE0274
AM286415.1	EMBL	CDS	319709	320746	.	+	0	ID=cds262;Parent=gene281;Dbxref=EnsemblGenomes-Gn:YE0274,EnsemblGenomes-Tr:CAL10407,GOA:A1JIG9,InterPro:IPR003170,InterPro:IPR006094,InterPro:IPR011601,InterPro:IPR016166,InterPro:IPR016167,InterPro:IPR016169,UniProtKB/TrEMBL:A1JIG9,NCBI_GP:CAL10407.1;Name=CAL10407.1;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=CAL10407.1;transl_table=11
AM286415.1	EMBL	sequence_feature	319766	320233	.	+	.	ID=id561;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score 34.7%2C E-value 1.4e-07;gbkey=misc_feature;gene=murB;inference=protein motif:PFAM:PF01565
AM286415.1	EMBL	sequence_feature	320324	320707	.	+	.	ID=id562;Note=Pfam match to entry PF02873 MurB_C%2CUDP-N-acetylenolpyruvoylglucosamine reductase%2C C-terminal domain%2C score 209.9%2C E-value 2.6e-60;gbkey=misc_feature;gene=murB;inference=protein motif:PFAM:PF02873
AM286415.1	EMBL	gene	320743	321702	.	+	.	ID=gene282;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;gene_synonym=bioR,dhbB;locus_tag=YE0275
AM286415.1	EMBL	CDS	320743	321702	.	+	0	ID=cds263;Parent=gene282;Dbxref=EnsemblGenomes-Gn:YE0275,EnsemblGenomes-Tr:CAL10408,GOA:A1JIH0,InterPro:IPR003142,InterPro:IPR004143,InterPro:IPR004408,InterPro:IPR004409,InterPro:IPR008988,InterPro:IPR011991,InterPro:IPR013196,UniProtKB/TrEMBL:A1JIH0,NCBI_GP:CAL10408.1;Name=CAL10408.1;gbkey=CDS;gene=birA;product=bifunctional protein BirA;protein_id=CAL10408.1;transl_table=11
AM286415.1	EMBL	sequence_feature	320800	320865	.	+	.	ID=id563;Note=Predicted helix-turn-helix motif with score 1520.000%2C SD 4.36 at aa 20-41%2C sequence HSGEQLGEMLGMSRAAINKHMH;gbkey=misc_feature;gene=birA
AM286415.1	EMBL	sequence_feature	320977	321387	.	+	.	ID=id564;Note=Pfam match to entry PF03099 BPL_LipA_LipB%2CBiotin/lipoate A/B protein ligase family%2C score 133.9%2CE-value 1.9e-37;gbkey=misc_feature;gene=birA;inference=protein motif:PFAM:PF03099
AM286415.1	EMBL	sequence_feature	321553	321693	.	+	.	ID=id565;Note=Pfam match to entry PF02237 BPL_C%2C Biotin protein ligase C terminal domain%2C score 63.5%2C E-value 2.9e-16;gbkey=misc_feature;gene=birA;inference=protein motif:PFAM:PF02237
AM286415.1	EMBL	gene	321742	322692	.	-	.	ID=gene283;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;gene_synonym=panK,rts;locus_tag=YE0276
AM286415.1	EMBL	CDS	321742	322692	.	-	0	ID=cds264;Parent=gene283;Dbxref=EnsemblGenomes-Gn:YE0276,EnsemblGenomes-Tr:CAL10409,GOA:A1JIH1,InterPro:IPR004566,InterPro:IPR006083,InterPro:IPR027417,NCBI_GP:CAL10409.1;Name=CAL10409.1;gbkey=CDS;gene=coaA;product=pantothenate kinase;protein_id=CAL10409.1;transl_table=11
AM286415.1	EMBL	sequence_feature	321754	322425	.	-	.	ID=id566;Note=Pfam match to entry PF00485 PRK%2CPhosphoribulokinase / Uridine kinase family%2C score -29.3%2CE-value 8.4e-07;gbkey=misc_feature;gene=coaA;inference=protein motif:PFAM:PF00485
AM286415.1	EMBL	sequence_feature	322387	322410	.	-	.	ID=id567;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=coaA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	322902	323453	.	-	.	ID=gene284;Name=YE0277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0277
AM286415.1	EMBL	CDS	322902	323453	.	-	0	ID=cds265;Parent=gene284;Dbxref=EnsemblGenomes-Gn:YE0277,EnsemblGenomes-Tr:CAL10410,GOA:A1JIH2,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JIH2,NCBI_GP:CAL10410.1;Name=CAL10410.1;gbkey=CDS;product=putative acetyltransferase;protein_id=CAL10410.1;transl_table=11
AM286415.1	EMBL	sequence_feature	323019	323267	.	-	.	ID=id568;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 43.5%2C E-value 3.1e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	323856	323931	.	+	.	ID=gene285;Name=tRNA-Thr (TGT);gbkey=Gene;gene=tRNA-Thr (TGT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	323856	323931	.	+	.	ID=rna22;Parent=gene285;gbkey=tRNA;gene=tRNA-Thr (TGT);product=tRNA-Thr
AM286415.1	EMBL	exon	323856	323931	.	+	.	ID=id569;Parent=rna22;gbkey=tRNA;gene=tRNA-Thr (TGT);product=tRNA-Thr
AM286415.1	EMBL	gene	323950	324034	.	+	.	ID=gene286;Name=tRNA-Tyr (GTA);gbkey=Gene;gene=tRNA-Tyr (GTA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	323950	324034	.	+	.	ID=rna23;Parent=gene286;gbkey=tRNA;gene=tRNA-Tyr (GTA);product=tRNA-Tyr
AM286415.1	EMBL	exon	323950	324034	.	+	.	ID=id570;Parent=rna23;gbkey=tRNA;gene=tRNA-Tyr (GTA);product=tRNA-Tyr
AM286415.1	EMBL	transcript	324050	324207	.	+	.	ID=rna24;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 100.37%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	exon	324050	324207	.	+	.	ID=id571;Parent=rna24;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 100.37%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	gene	324352	324426	.	+	.	ID=gene287;Name=tRNA-Gly (TCC);gbkey=Gene;gene=tRNA-Gly (TCC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	324352	324426	.	+	.	ID=rna25;Parent=gene287;gbkey=tRNA;gene=tRNA-Gly (TCC);product=tRNA-Gly
AM286415.1	EMBL	exon	324352	324426	.	+	.	ID=id572;Parent=rna25;gbkey=tRNA;gene=tRNA-Gly (TCC);product=tRNA-Gly
AM286415.1	EMBL	gene	324433	324508	.	+	.	ID=gene288;Name=tRNA-Thr (GGT);gbkey=Gene;gene=tRNA-Thr (GGT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	324433	324508	.	+	.	ID=rna26;Parent=gene288;gbkey=tRNA;gene=tRNA-Thr (GGT);product=tRNA-Thr
AM286415.1	EMBL	exon	324433	324508	.	+	.	ID=id573;Parent=rna26;gbkey=tRNA;gene=tRNA-Thr (GGT);product=tRNA-Thr
AM286415.1	EMBL	gene	324617	325801	.	+	.	ID=gene289;Name=tufA;gbkey=Gene;gene=tufA;gene_biotype=protein_coding;locus_tag=YE0278
AM286415.1	EMBL	CDS	324617	325801	.	+	0	ID=cds266;Parent=gene289;Dbxref=EnsemblGenomes-Gn:YE0278,EnsemblGenomes-Tr:CAL10411,GOA:A1JIH3,InterPro:IPR000795,InterPro:IPR004160,InterPro:IPR004161,InterPro:IPR004541,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009001,InterPro:IPR027417,NCBI_GP:CAL10411.1;Name=CAL10411.1;Note=Similar to Yersinia pestis elongation factor TU TufA or Ypo0203 SWALL:Q8ZJB2 (EMBL:AJ414141) (394 aa) fasta scores: E(): 1.4e-143%2C 97.2 38d in 393 aa and to Escherichia coli elongation factor TU (TufA or B3339) and (TufB or B3980) SWALL:EFTU_ECOLI (SWALL:P02990) (393 aa) fasta scores: E(): 2.6e-141%2C 94.64 38d in 392 aa;gbkey=CDS;gene=tufA;inference=similar to sequence:UniProtKB:P02990;product=elongation factor TU;protein_id=CAL10411.1;transl_table=11
AM286415.1	EMBL	sequence_feature	324644	325228	.	+	.	ID=id574;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu GTP binding domain%2C score 326.6%2C E-value 1.9e-95;gbkey=misc_feature;gene=tufA;inference=protein motif:PFAM:PF00009
AM286415.1	EMBL	sequence_feature	324671	324694	.	+	.	ID=id575;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=tufA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	324767	324814	.	+	.	ID=id576;Note=PS00301 GTP-binding elongation factors signature.;gbkey=misc_feature;gene=tufA;inference=protein motif:Prosite:PS00301
AM286415.1	EMBL	sequence_feature	325262	325498	.	+	.	ID=id577;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 109.0%2C E-value 5.9e-30;gbkey=misc_feature;gene=tufA;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	sequence_feature	325508	325795	.	+	.	ID=id578;Note=Pfam match to entry PF03143 GTP_EFTU_D3%2C Elongation factor Tu C-terminal domain%2C score 213.1%2C E-value 2.7e-61;gbkey=misc_feature;gene=tufA;inference=protein motif:PFAM:PF03143
AM286415.1	EMBL	gene	326041	326424	.	+	.	ID=gene290;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;gene_synonym=prlG;locus_tag=YE0279
AM286415.1	EMBL	CDS	326041	326424	.	+	0	ID=cds267;Parent=gene290;Dbxref=EnsemblGenomes-Gn:YE0279,EnsemblGenomes-Tr:CAL10412,GOA:A1JIH4,InterPro:IPR001901,InterPro:IPR005807,InterPro:IPR022943,UniProtKB/TrEMBL:A1JIH4,NCBI_GP:CAL10412.1;Name=CAL10412.1;gbkey=CDS;gene=secE;product=preprotein translocase SecE subunit;protein_id=CAL10412.1;transl_table=11
AM286415.1	EMBL	sequence_feature	326095	326148	.	+	.	ID=id579;Note=3 probable transmembrane helices predicted for YE0279 by TMHMM2.0 at aa 19-36%2C 41-63 and 94-116;gbkey=misc_feature;gene=secE;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	326161	326229	.	+	.	ID=id579;Note=3 probable transmembrane helices predicted for YE0279 by TMHMM2.0 at aa 19-36%2C 41-63 and 94-116;gbkey=misc_feature;gene=secE;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	326320	326388	.	+	.	ID=id579;Note=3 probable transmembrane helices predicted for YE0279 by TMHMM2.0 at aa 19-36%2C 41-63 and 94-116;gbkey=misc_feature;gene=secE;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	326239	326409	.	+	.	ID=id580;Note=Pfam match to entry PF00584 SecE%2C SecE/Sec61-gamma subunits of protein translocation complex%2C score 97.3%2CE-value 2e-26;gbkey=misc_feature;gene=secE;inference=protein motif:PFAM:PF00584
AM286415.1	EMBL	sequence_feature	326251	326337	.	+	.	ID=id581;Note=PS01067 Protein secE/sec61-gamma signature.;gbkey=misc_feature;gene=secE;inference=protein motif:Prosite:PS01067
AM286415.1	EMBL	gene	326426	326971	.	+	.	ID=gene291;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=YE0280
AM286415.1	EMBL	CDS	326426	326971	.	+	0	ID=cds268;Parent=gene291;Dbxref=EnsemblGenomes-Gn:YE0280,EnsemblGenomes-Tr:CAL10413,GOA:A1JIH5,InterPro:IPR001062,InterPro:IPR005824,InterPro:IPR006645,InterPro:IPR008991,InterPro:IPR014722,InterPro:IPR015869,UniProtKB/TrEMBL:A1JIH5,NCBI_GP:CAL10413.1;Name=CAL10413.1;gbkey=CDS;gene=nusG;product=transcription antitermination protein;protein_id=CAL10413.1;transl_table=11
AM286415.1	EMBL	sequence_feature	326441	326572	.	+	.	ID=id582;Note=Pfam match to entry PF02357 NusG%2C Transcription termination factor nusG%2C score 81.1%2C E-value 1.5e-21;gbkey=misc_feature;gene=nusG;inference=protein motif:PFAM:PF02357
AM286415.1	EMBL	sequence_feature	326807	326920	.	+	.	ID=id583;Note=Pfam match to entry PF00467 KOW%2C KOW motif%2C score 47.9%2C E-value 1.5e-11;gbkey=misc_feature;gene=nusG;inference=protein motif:PFAM:PF00467
AM286415.1	EMBL	sequence_feature	326915	326944	.	+	.	ID=id584;Note=PS01014 Transcription termination factor nusG signature.;gbkey=misc_feature;gene=nusG;inference=protein motif:Prosite:PS01014
AM286415.1	EMBL	gene	327165	327593	.	+	.	ID=gene292;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;gene_synonym=relC;locus_tag=YE0281
AM286415.1	EMBL	CDS	327165	327593	.	+	0	ID=cds269;Parent=gene292;Dbxref=EnsemblGenomes-Gn:YE0281,EnsemblGenomes-Tr:CAL10414,GOA:A1JIH6,InterPro:IPR000911,InterPro:IPR006519,InterPro:IPR020783,InterPro:IPR020784,InterPro:IPR020785,NCBI_GP:CAL10414.1;Name=CAL10414.1;gbkey=CDS;gene=rplK;product=50S ribosomal protein L11;protein_id=CAL10414.1;transl_table=11
AM286415.1	EMBL	sequence_feature	327186	327365	.	+	.	ID=id585;Note=Pfam match to entry PF03946 Ribosomal_L11_N%2CRibosomal protein L11%2C N-terminal domain%2C score 139.4%2CE-value 4.1e-39;gbkey=misc_feature;gene=rplK;inference=protein motif:PFAM:PF03946
AM286415.1	EMBL	sequence_feature	327378	327584	.	+	.	ID=id586;Note=Pfam match to entry PF00298 Ribosomal_L11%2CRibosomal protein L11%2C RNA binding domain%2C score 130.4%2CE-value 2.2e-36;gbkey=misc_feature;gene=rplK;inference=protein motif:PFAM:PF00298
AM286415.1	EMBL	sequence_feature	327543	327590	.	+	.	ID=id587;Note=PS00359 Ribosomal protein L11 signature.;gbkey=misc_feature;gene=rplK;inference=protein motif:Prosite:PS00359
AM286415.1	EMBL	gene	327597	328301	.	+	.	ID=gene293;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=YE0282
AM286415.1	EMBL	CDS	327597	328301	.	+	0	ID=cds270;Parent=gene293;Dbxref=EnsemblGenomes-Gn:YE0282,EnsemblGenomes-Tr:CAL10415,GOA:A1JIH7,InterPro:IPR002143,InterPro:IPR005878,InterPro:IPR016094,InterPro:IPR016095,InterPro:IPR023673,InterPro:IPR023674,InterPro:IPR028364,NCBI_GP:CAL10415.1;Name=CAL10415.1;gbkey=CDS;gene=rplA;product=50S ribosomal protein L1;protein_id=CAL10415.1;transl_table=11
AM286415.1	EMBL	sequence_feature	327639	328259	.	+	.	ID=id588;Note=Pfam match to entry PF00687 Ribosomal_L1%2C Ribosomal protein L1p/L10e family%2C score 432.6%2C E-value 2.3e-127;gbkey=misc_feature;gene=rplA;inference=protein motif:PFAM:PF00687
AM286415.1	EMBL	sequence_feature	327957	328013	.	+	.	ID=id589;Note=PS01199 Ribosomal protein L1 signature.;gbkey=misc_feature;gene=rplA;inference=protein motif:Prosite:PS01199
AM286415.1	EMBL	gene	328676	329179	.	+	.	ID=gene294;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=YE0283
AM286415.1	EMBL	CDS	328676	329179	.	+	0	ID=cds271;Parent=gene294;Dbxref=EnsemblGenomes-Gn:YE0283,EnsemblGenomes-Tr:CAL10416,GOA:A1JIH8,InterPro:IPR001790,InterPro:IPR002363,InterPro:IPR022973,NCBI_GP:CAL10416.1;Name=CAL10416.1;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=CAL10416.1;transl_table=11
AM286415.1	EMBL	sequence_feature	328682	328978	.	+	.	ID=id590;Note=Pfam match to entry PF00466 Ribosomal_L10%2CRibosomal protein L10%2C score 126.4%2C E-value 3.5e-35;gbkey=misc_feature;gene=rplJ;inference=protein motif:PFAM:PF00466
AM286415.1	EMBL	sequence_feature	328760	328801	.	+	.	ID=id591;Note=PS01109 Ribosomal protein L10 signature.;gbkey=misc_feature;gene=rplJ;inference=protein motif:Prosite:PS01109
AM286415.1	EMBL	gene	329248	329616	.	+	.	ID=gene295;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=YE0284
AM286415.1	EMBL	CDS	329248	329616	.	+	0	ID=cds272;Parent=gene295;Dbxref=EnsemblGenomes-Gn:YE0284,EnsemblGenomes-Tr:CAL10417,GOA:A1JIH9,InterPro:IPR000206,InterPro:IPR008932,InterPro:IPR013823,InterPro:IPR014719,NCBI_GP:CAL10417.1;Name=CAL10417.1;gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=CAL10417.1;transl_table=11
AM286415.1	EMBL	sequence_feature	329410	329613	.	+	.	ID=id592;Note=Pfam match to entry PF00542 Ribosomal_L12%2CRibosomal protein L7/L12 C-terminal domain%2C score 126.0%2CE-value 4.4e-35;gbkey=misc_feature;gene=rplL;inference=protein motif:PFAM:PF00542
AM286415.1	EMBL	gene	329960	333988	.	+	.	ID=gene296;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;gene_synonym=groN,nitB,rif,ron,stl,stv,tabD;locus_tag=YE0286
AM286415.1	EMBL	CDS	329960	333988	.	+	0	ID=cds273;Parent=gene296;Dbxref=EnsemblGenomes-Gn:YE0286,EnsemblGenomes-Tr:CAL10418,GOA:A1JII0,InterPro:IPR007120,InterPro:IPR007121,InterPro:IPR007641,InterPro:IPR007642,InterPro:IPR007644,InterPro:IPR007645,InterPro:IPR010243,InterPro:IPR014724,InterPro:IPR015712,InterPro:IPR019462,NCBI_GP:CAL10418.1;Name=CAL10418.1;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase beta chain;protein_id=CAL10418.1;transl_table=11
AM286415.1	EMBL	sequence_feature	330191	333856	.	+	.	ID=id593;Note=Pfam match to entry PF00562 RNA_pol_B%2C RNA polymerase beta subunit%2C score 2023.1%2C E-value 0;gbkey=misc_feature;gene=rpoB;inference=protein motif:PFAM:PF00562
AM286415.1	EMBL	sequence_feature	333146	333184	.	+	.	ID=id594;Note=PS01166 RNA polymerases beta chain signature.;gbkey=misc_feature;gene=rpoB;inference=protein motif:Prosite:PS01166
AM286415.1	EMBL	gene	334125	338345	.	+	.	ID=gene297;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;gene_synonym=tabB;locus_tag=YE0287
AM286415.1	EMBL	CDS	334125	338345	.	+	0	ID=cds274;Parent=gene297;Dbxref=EnsemblGenomes-Gn:YE0287,EnsemblGenomes-Tr:CAL10419,GOA:A1JII1,InterPro:IPR000722,InterPro:IPR006592,InterPro:IPR007066,InterPro:IPR007080,InterPro:IPR007081,InterPro:IPR007083,InterPro:IPR012754,NCBI_GP:CAL10419.1;Name=CAL10419.1;gbkey=CDS;gene=rpoC;product=DNA-directed RNA polymerase beta' chain;protein_id=CAL10419.1;transl_table=11
AM286415.1	EMBL	sequence_feature	334827	336617	.	+	.	ID=id595;Note=Pfam match to entry PF00623 RNA_pol_A%2C RNA polymerase alpha subunit%2C score 989.5%2C E-value 5.3e-295;gbkey=misc_feature;gene=rpoC;inference=protein motif:PFAM:PF00623
AM286415.1	EMBL	sequence_feature	336846	336950	.	+	.	ID=id596;Note=Pfam match to entry PF01854 RNA_pol_A2%2C RNA polymerase A/beta/A subunit%2C score 44.9%2C E-value 3.7e-13;gbkey=misc_feature;gene=rpoC;inference=protein motif:PFAM:PF01854
AM286415.1	EMBL	sequence_feature	338091	338213	.	+	.	ID=id597;Note=Pfam match to entry PF01854 RNA_pol_A2%2C RNA polymerase A/beta/A subunit%2C score 37.2%2C E-value 5.7e-11;gbkey=misc_feature;gene=rpoC;inference=protein motif:PFAM:PF01854
AM286415.1	EMBL	repeat_region	338388	339814	.	-	.	ID=id598;Note=IS4-like insertion sequence element IS1660;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	338388	338403	.	+	.	ID=id599;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	stem_loop	338389	338420	.	-	.	ID=id600;gbkey=stem_loop
AM286415.1	EMBL	gene	338397	339731	.	-	.	ID=gene298;Name=YE0288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0288
AM286415.1	EMBL	CDS	338397	339731	.	-	0	ID=cds275;Parent=gene298;Dbxref=EnsemblGenomes-Gn:YE0288,EnsemblGenomes-Tr:CAL10420,GOA:A1JII2,InterPro:IPR002559,InterPro:IPR012337,InterPro:IPR024473,UniProtKB/TrEMBL:A1JII2,NCBI_GP:CAL10420.1;Name=CAL10420.1;Note=Highly similar to many transposases from the IS element IS4 including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 6.4e-165%2C89.31 38d in 440 aa%2C and to Pantoea agglomerans insertion element protein SWALL:P71168 (EMBL:X81894) (440 aa) fasta scores: E(): 9.5e-86%2C 52.19 38d in 433 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1660;protein_id=CAL10420.1;transl_table=11
AM286415.1	EMBL	sequence_feature	338676	339353	.	-	.	ID=id601;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 155.9%2C E-value 4.6e-44;gbkey=misc_feature;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	INVERTED	339799	339814	.	-	.	ID=id602;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	339869	340999	.	-	.	ID=gene299;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=YE0289
AM286415.1	EMBL	CDS	339869	340999	.	-	0	ID=cds276;Parent=gene299;Dbxref=EnsemblGenomes-Gn:YE0289,EnsemblGenomes-Tr:CAL10421,GOA:A1JII3,InterPro:IPR007197,InterPro:IPR010722,InterPro:IPR012726,InterPro:IPR013785,UniProtKB/TrEMBL:A1JII3,NCBI_GP:CAL10421.1;Name=CAL10421.1;gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=CAL10421.1;transl_table=11
AM286415.1	EMBL	gene	340992	341780	.	-	.	ID=gene300;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=YE0290
AM286415.1	EMBL	CDS	340992	341780	.	-	0	ID=cds277;Parent=gene300;Dbxref=EnsemblGenomes-Gn:YE0290,EnsemblGenomes-Tr:CAL10422,GOA:A1JII4,InterPro:IPR008867,InterPro:IPR013785,NCBI_GP:CAL10422.1;Name=CAL10422.1;gbkey=CDS;gene=thiG;product=thiamine biosynthesis protein;protein_id=CAL10422.1;transl_table=11
AM286415.1	EMBL	gene	341782	341997	.	-	.	ID=gene301;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=YE0290A
AM286415.1	EMBL	CDS	341782	341997	.	-	0	ID=cds278;Parent=gene301;Dbxref=EnsemblGenomes-Gn:YE0290A,EnsemblGenomes-Tr:CAL10423,InterPro:IPR003749,InterPro:IPR010035,InterPro:IPR012675,InterPro:IPR016155,UniProtKB/TrEMBL:A1JII5,NCBI_GP:CAL10423.1;Name=CAL10423.1;gbkey=CDS;gene=thiS;product=thiamine biosynthesis protein;protein_id=CAL10423.1;transl_table=11
AM286415.1	EMBL	gene	341994	342776	.	-	.	ID=gene302;Name=thiF;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=YE0291
AM286415.1	EMBL	CDS	341994	342776	.	-	0	ID=cds279;Parent=gene302;Dbxref=EnsemblGenomes-Gn:YE0291,EnsemblGenomes-Tr:CAL10424,GOA:A1JII6,InterPro:IPR000594,InterPro:IPR007901,InterPro:IPR009036,InterPro:IPR016040,UniProtKB/TrEMBL:A1JII6,NCBI_GP:CAL10424.1;Name=CAL10424.1;gbkey=CDS;gene=thiF;product=thiamine biosynthesis protein;protein_id=CAL10424.1;transl_table=11
AM286415.1	EMBL	sequence_feature	342258	342482	.	-	.	ID=id603;Note=Pfam match to entry PF00899 ThiF%2C ThiF family %2Cscore 65.6%2C E-value 6.2e-18;gbkey=misc_feature;gene=thiF;inference=protein motif:PFAM:PF00899
AM286415.1	EMBL	gene	342760	343371	.	-	.	ID=gene303;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=YE0292
AM286415.1	EMBL	CDS	342760	343371	.	-	0	ID=cds280;Parent=gene303;Dbxref=EnsemblGenomes-Gn:YE0292,EnsemblGenomes-Tr:CAL10425,GOA:A1JII7,InterPro:IPR003733,InterPro:IPR013785,InterPro:IPR022998,UniProtKB/TrEMBL:A1JII7,NCBI_GP:CAL10425.1;Name=CAL10425.1;gbkey=CDS;gene=thiE;product=thiamine-phosphate pyrophosphorylase;protein_id=CAL10425.1;transl_table=11
AM286415.1	EMBL	sequence_feature	342796	343371	.	-	.	ID=id604;Note=Pfam match to entry PF02581 TMP-TENI%2C Thiamine monophosphate synthase/TENI%2C score 276.6%2C E-value 2.1e-80;gbkey=misc_feature;gene=thiE;inference=protein motif:PFAM:PF02581
AM286415.1	EMBL	sequence_feature	342889	342918	.	-	.	ID=id605;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=thiE;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	343427	345313	.	-	.	ID=gene304;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=YE0293
AM286415.1	EMBL	CDS	343427	345313	.	-	0	ID=cds281;Parent=gene304;Dbxref=EnsemblGenomes-Gn:YE0293,EnsemblGenomes-Tr:CAL10426,GOA:A1JII8,InterPro:IPR002817,InterPro:IPR025747,UniProtKB/TrEMBL:A1JII8,NCBI_GP:CAL10426.1;Name=CAL10426.1;gbkey=CDS;gene=thiC;product=thiamine biosynthesis protein ThiC;protein_id=CAL10426.1;transl_table=11
AM286415.1	EMBL	sequence_feature	343583	344935	.	-	.	ID=id606;Note=Pfam match to entry PF01964 ThiC%2C ThiC family %2Cscore 1170.5%2C E-value 0;gbkey=misc_feature;gene=thiC;inference=protein motif:PFAM:PF01964
AM286415.1	EMBL	sequence_feature	343907	343939	.	-	.	ID=id607;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=thiC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	transcript	345526	345651	.	-	.	ID=rna27;Note=TPP riboswitch (THI element) (RF00059) as predicted by Rfam%2C score 80.91%2C positions 1 to 105;gbkey=misc_RNA
AM286415.1	EMBL	exon	345526	345651	.	-	.	ID=id608;Parent=rna27;Note=TPP riboswitch (THI element) (RF00059) as predicted by Rfam%2C score 80.91%2C positions 1 to 105;gbkey=misc_RNA
AM286415.1	EMBL	gene	345825	346328	.	-	.	ID=gene305;Name=rsd;gbkey=Gene;gene=rsd;gene_biotype=protein_coding;locus_tag=YE0295
AM286415.1	EMBL	CDS	345825	346328	.	-	0	ID=cds282;Parent=gene305;Dbxref=EnsemblGenomes-Gn:YE0295,EnsemblGenomes-Tr:CAL10427,GOA:A1JII9,InterPro:IPR007448,InterPro:IPR023785,NCBI_GP:CAL10427.1;Name=CAL10427.1;gbkey=CDS;gene=rsd;product=regulator of sigma D;protein_id=CAL10427.1;transl_table=11
AM286415.1	EMBL	gene	346420	347205	.	+	.	ID=gene306;Name=YE0296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0296
AM286415.1	EMBL	CDS	346420	347205	.	+	0	ID=cds283;Parent=gene306;Dbxref=EnsemblGenomes-Gn:YE0296,EnsemblGenomes-Tr:CAL10428,GOA:A1JIJ0,InterPro:IPR000086,InterPro:IPR015375,InterPro:IPR015376,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR022925,NCBI_GP:CAL10428.1;Name=CAL10428.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10428.1;transl_table=11
AM286415.1	EMBL	sequence_feature	346738	346803	.	+	.	ID=id609;Note=Predicted helix-turn-helix motif with score 1040.000%2C SD 2.73 at aa 107-128%2C sequence ASRTEWACLCNHCRERYYPQIA;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	346798	347160	.	+	.	ID=id610;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 91.2%2C E-value 1.3e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	sequence_feature	346894	346953	.	+	.	ID=id611;Note=PS00893 mutT domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00893
AM286415.1	EMBL	gene	347286	348353	.	+	.	ID=gene307;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=YE0297
AM286415.1	EMBL	CDS	347286	348353	.	+	0	ID=cds284;Parent=gene307;Dbxref=EnsemblGenomes-Gn:YE0297,EnsemblGenomes-Tr:CAL10429,GOA:A1JIJ1,InterPro:IPR000257,InterPro:IPR006361,NCBI_GP:CAL10429.1;Name=CAL10429.1;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=CAL10429.1;transl_table=11
AM286415.1	EMBL	sequence_feature	347295	348329	.	+	.	ID=id612;Note=Pfam match to entry PF01208 URO-D%2C Uroporphyrinogen decarboxylase (URO-D)%2C score 699.3%2C E-value 1.2e-207;gbkey=misc_feature;gene=hemE;inference=protein motif:PFAM:PF01208
AM286415.1	EMBL	sequence_feature	347349	347378	.	+	.	ID=id613;Note=PS00906 Uroporphyrinogen decarboxylase signature 1.;gbkey=misc_feature;gene=hemE;inference=protein motif:Prosite:PS00906
AM286415.1	EMBL	sequence_feature	347712	347759	.	+	.	ID=id614;Note=PS00907 Uroporphyrinogen decarboxylase signature 2.;gbkey=misc_feature;gene=hemE;inference=protein motif:Prosite:PS00907
AM286415.1	EMBL	gene	348377	349081	.	+	.	ID=gene308;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=YE0298
AM286415.1	EMBL	CDS	348377	349081	.	+	0	ID=cds285;Parent=gene308;Dbxref=EnsemblGenomes-Gn:YE0298,EnsemblGenomes-Tr:CAL10430,GOA:A1JIJ2,InterPro:IPR007581,NCBI_GP:CAL10430.1;Name=CAL10430.1;gbkey=CDS;gene=nfi;product=endonuclease V;protein_id=CAL10430.1;transl_table=11
AM286415.1	EMBL	gene	349127	349717	.	+	.	ID=gene309;Name=YE0299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0299
AM286415.1	EMBL	CDS	349127	349717	.	+	0	ID=cds286;Parent=gene309;Dbxref=EnsemblGenomes-Gn:YE0299,EnsemblGenomes-Tr:CAL10431,InterPro:IPR007338,InterPro:IPR023381,UniProtKB/TrEMBL:A1JIJ3,NCBI_GP:CAL10431.1;Name=CAL10431.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10431.1;transl_table=11
AM286415.1	EMBL	gene	349906	350181	.	+	.	ID=gene310;Name=hupA;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=YE0300
AM286415.1	EMBL	CDS	349906	350181	.	+	0	ID=cds287;Parent=gene310;Dbxref=EnsemblGenomes-Gn:YE0300,EnsemblGenomes-Tr:CAL10432,GOA:A1JIJ4,InterPro:IPR000119,InterPro:IPR010992,InterPro:IPR020816,UniProtKB/TrEMBL:A1JIJ4,NCBI_GP:CAL10432.1;Name=CAL10432.1;gbkey=CDS;gene=hupA;product=DNA-binding protein HU-alpha;protein_id=CAL10432.1;transl_table=11
AM286415.1	EMBL	sequence_feature	349906	350175	.	+	.	ID=id615;Note=Pfam match to entry PF00216 Bac_DNA_binding%2CBacterial DNA-binding protein%2C score 179.7%2C E-value 3e-51;gbkey=misc_feature;gene=hupA;inference=protein motif:PFAM:PF00216
AM286415.1	EMBL	sequence_feature	350041	350100	.	+	.	ID=id616;Note=PS00045 Bacterial histone-like DNA-binding proteins signature.;gbkey=misc_feature;gene=hupA;inference=protein motif:Prosite:PS00045
AM286415.1	EMBL	gene	350186	350887	.	+	.	ID=gene311;Name=yjaH;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=YE0301
AM286415.1	EMBL	CDS	350186	350887	.	+	0	ID=cds288;Parent=gene311;Dbxref=EnsemblGenomes-Gn:YE0301,EnsemblGenomes-Tr:CAL10433,InterPro:IPR010858,InterPro:IPR016500,UniProtKB/TrEMBL:A1JIJ5,NCBI_GP:CAL10433.1;Name=CAL10433.1;gbkey=CDS;gene=yjaH;product=putative exported protein;protein_id=CAL10433.1;transl_table=11
AM286415.1	EMBL	sequence_feature	350252	350284	.	+	.	ID=id617;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yjaH;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	350982	352277	.	-	.	ID=gene312;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=YE0302
AM286415.1	EMBL	CDS	350982	352277	.	-	0	ID=cds289;Parent=gene312;Dbxref=EnsemblGenomes-Gn:YE0302,EnsemblGenomes-Tr:CAL10434,GOA:A1JIJ6,InterPro:IPR000115,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR016185,InterPro:IPR020559,InterPro:IPR020560,InterPro:IPR020561,InterPro:IPR020562,UniProtKB/TrEMBL:A1JIJ6,NCBI_GP:CAL10434.1;Name=CAL10434.1;gbkey=CDS;gene=purD;product=phosphoribosylamine--glycine ligase;protein_id=CAL10434.1;transl_table=11
AM286415.1	EMBL	sequence_feature	351003	351290	.	-	.	ID=id618;Note=Pfam match to entry PF02843 GARS_C%2CPhosphoribosylglycinamide synthetase%2C C domain%2C score 178.5%2C E-value 7.3e-51;gbkey=misc_feature;gene=purD;inference=protein motif:PFAM:PF02843
AM286415.1	EMBL	sequence_feature	351300	351719	.	-	.	ID=id619;Note=Pfam match to entry PF01071 GARS%2CPhosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%2C score 325.2%2C E-value 5e-95;gbkey=misc_feature;gene=purD;inference=protein motif:PFAM:PF01071
AM286415.1	EMBL	sequence_feature	351387	351410	.	-	.	ID=id620;Note=PS00184 Phosphoribosylglycinamide synthetase signature.;gbkey=misc_feature;gene=purD;inference=protein motif:Prosite:PS00184
AM286415.1	EMBL	sequence_feature	351720	351968	.	-	.	ID=id621;Note=Pfam match to entry PF02842 GARS_B%2CPhosphoribosylglycinamide synthetase%2C B domain%2C score 181.3%2C E-value 9.9e-52;gbkey=misc_feature;gene=purD;inference=protein motif:PFAM:PF02842
AM286415.1	EMBL	sequence_feature	351972	352277	.	-	.	ID=id622;Note=Pfam match to entry PF02844 GARS_N%2CPhosphoribosylglycinamide synthetase%2C N domain%2C score 212.4%2C E-value 4.3e-61;gbkey=misc_feature;gene=purD;inference=protein motif:PFAM:PF02844
AM286415.1	EMBL	gene	352303	353892	.	-	.	ID=gene313;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=YE0303
AM286415.1	EMBL	CDS	352303	353892	.	-	0	ID=cds290;Parent=gene313;Dbxref=EnsemblGenomes-Gn:YE0303,EnsemblGenomes-Tr:CAL10435,GOA:A1JIJ7,InterPro:IPR002695,InterPro:IPR011607,InterPro:IPR016193,InterPro:IPR024051,NCBI_GP:CAL10435.1;Name=CAL10435.1;gbkey=CDS;gene=purH;product=bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase;protein_id=CAL10435.1;transl_table=11
AM286415.1	EMBL	sequence_feature	352510	353484	.	-	.	ID=id623;Note=Pfam match to entry PF01808 AICARFT_IMPCHas%2CAICARFT/IMPCHase bienzyme%2C score 696.9%2C E-value 6.1e-207;gbkey=misc_feature;gene=purH;inference=protein motif:PFAM:PF01808
AM286415.1	EMBL	sequence_feature	353497	353865	.	-	.	ID=id624;Note=Pfam match to entry PF02142 MGS%2C MGS-like domain %2Cscore 194.5%2C E-value 1.1e-55;gbkey=misc_feature;gene=purH;inference=protein motif:PFAM:PF02142
AM286415.1	EMBL	gene	354706	356194	.	+	.	ID=gene314;Name=16S rRNA;gbkey=Gene;gene=16S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	354706	356194	.	+	.	ID=rna28;Parent=gene314;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	exon	354706	356194	.	+	.	ID=id625;Parent=rna28;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	gene	356419	356494	.	+	.	ID=gene315;Name=tRNA-Glu (TTC);gbkey=Gene;gene=tRNA-Glu (TTC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	356419	356494	.	+	.	ID=rna29;Parent=gene315;gbkey=tRNA;gene=tRNA-Glu (TTC);product=tRNA-Glu
AM286415.1	EMBL	exon	356419	356494	.	+	.	ID=id626;Parent=rna29;gbkey=tRNA;gene=tRNA-Glu (TTC);product=tRNA-Glu
AM286415.1	EMBL	gene	356873	359866	.	+	.	ID=gene316;Name=23S rRNA;gbkey=Gene;gene=23S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	356873	359866	.	+	.	ID=rna30;Parent=gene316;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	exon	356873	359866	.	+	.	ID=id627;Parent=rna30;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	gene	359866	360103	.	+	.	ID=gene317;Name=5S rRNA;gbkey=Gene;gene=5S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	359866	360103	.	+	.	ID=rna31;Parent=gene317;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	exon	359866	360103	.	+	.	ID=id628;Parent=rna31;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	repeat_region	360254	361556	.	+	.	ID=id629;Note=Insertion sequence element IS1669;gbkey=repeat_region
AM286415.1	EMBL	gene	360392	360706	.	+	.	ID=gene318;Name=YE0304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0304
AM286415.1	EMBL	CDS	360392	360706	.	+	0	ID=cds291;Parent=gene318;Dbxref=EnsemblGenomes-Gn:YE0304,EnsemblGenomes-Tr:CAL10436,GOA:A1JIJ8,InterPro:IPR009057,UniProtKB/TrEMBL:A1JIJ8,NCBI_GP:CAL10436.1;Name=CAL10436.1;Note=Similar to several including: Yersinia pestis hypothetical protein Ypo2009A SWALL:Q8ZEY6 (EMBL:AJ414151) (104 aa) fasta scores: E(): 6.5e-31%2C 87.5 38d in 104 aa%2Cand in part to Salmonella typhimurium putative cytoplasmic protein Stm0948 SWALL:Q8ZQE1 (EMBL:AE008740) (133 aa) fasta scores: E(): 3.8e-16%2C 53 38d in 100 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=IS1669 hypothetical protein;protein_id=CAL10436.1;transl_table=11
AM286415.1	EMBL	gene	360724	361521	.	+	.	ID=gene319;Name=YE0305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0305
AM286415.1	EMBL	CDS	360724	361521	.	+	0	ID=cds292;Parent=gene319;Dbxref=EnsemblGenomes-Gn:YE0305,EnsemblGenomes-Tr:CAL10437,GOA:A1JIJ9,InterPro:IPR001584,InterPro:IPR012337,UniProtKB/TrEMBL:A1JIJ9,NCBI_GP:CAL10437.1;Name=CAL10437.1;Note=Similar to Shigella sonnei insertion element IS600 hypothetical protein SWALL:YIS2_SHISO (SWALL:P16940) (272 aa) fasta scores: E(): 5.9e-25%2C 37.4 38d in 270 aa%2CPseudomonas aeruginosa hypothetical protein Pa0257 SWALL:Q9I6N2 (EMBL:AE004463) (263 aa) fasta scores: E(): 8.6e-70%2C 66.16 38d in 263 aa and to Porphyromonas gingivalis transposase Orf2 SWALL:Q9L796 (EMBL:AF224744) (312 aa) fasta scores: E(): 9.8e-27%2C 37.26 38d in 271 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P16940;product=putative transposase for insertion element IS1669;protein_id=CAL10437.1;transl_table=11
AM286415.1	EMBL	sequence_feature	361036	361512	.	+	.	ID=id630;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 121.4%2C E-value 1.1e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	361779	362948	.	+	.	ID=gene320;Name=YE0306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0306
AM286415.1	EMBL	CDS	361779	362948	.	+	0	ID=cds293;Parent=gene320;Dbxref=EnsemblGenomes-Gn:YE0306,EnsemblGenomes-Tr:CAL10438,GOA:A1JIK0,InterPro:IPR025890,InterPro:IPR029058,UniProtKB/TrEMBL:A1JIK0,NCBI_GP:CAL10438.1;Name=CAL10438.1;gbkey=CDS;product=putative hydrolase;protein_id=CAL10438.1;transl_table=11
AM286415.1	EMBL	sequence_feature	361791	361859	.	+	.	ID=id631;Note=1 probable transmembrane helix predicted for YE0306 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	362472	362600	.	+	.	ID=id632;Note=Pfam match to entry PF01738 DLH%2C Dienelactone hydrolase family%2C score 25.8%2C E-value 1.6e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF01738
AM286415.1	EMBL	gene	362987	364642	.	-	.	ID=gene321;Name=YE0307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0307
AM286415.1	EMBL	CDS	362987	364642	.	-	0	ID=cds294;Parent=gene321;Dbxref=EnsemblGenomes-Gn:YE0307,EnsemblGenomes-Tr:CAL10439,GOA:A1JIK1,InterPro:IPR001734,InterPro:IPR014083,InterPro:IPR018212,InterPro:IPR019900,NCBI_GP:CAL10439.1;Name=CAL10439.1;gbkey=CDS;product=putative transmembrane transport protein;protein_id=CAL10439.1;transl_table=11
AM286415.1	EMBL	sequence_feature	364475	364543	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	364346	364414	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	364265	364333	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	364136	364204	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	364040	364108	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	363959	364027	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	363782	363850	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	363677	363745	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	363488	363556	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	363368	363427	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	363287	363355	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	363182	363250	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	363086	363139	.	-	.	ID=id633;Note=13 probable transmembrane helices predicted for YE0307 by TMHMM2.0 at aa 34-56%2C 77-99%2C 104-126%2C 147-169%2C179-201%2C 206-228%2C 265-287%2C 300-322%2C 363-385%2C 406-425%2C430-452%2C 465-487 and 502-519;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	sequence_feature	363227	363289	.	-	.	ID=id634;Note=PS00457 Sodium:solute symporter family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00457
AM286415.1	EMBL	sequence_feature	363233	364453	.	-	.	ID=id635;Note=Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family%2C score 603.9%2C E-value 6.2e-179;gbkey=misc_feature;inference=protein motif:PFAM:PF00474
AM286415.1	EMBL	sequence_feature	363311	363343	.	-	.	ID=id636;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	364031	364108	.	-	.	ID=id637;Note=PS00456 Sodium:solute symporter family signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00456
AM286415.1	EMBL	gene	364639	364950	.	-	.	ID=gene322;Name=YE0308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0308
AM286415.1	EMBL	CDS	364639	364950	.	-	0	ID=cds295;Parent=gene322;Dbxref=EnsemblGenomes-Gn:YE0308,EnsemblGenomes-Tr:CAL10440,InterPro:IPR007436,UniProtKB/TrEMBL:A1JIK2,NCBI_GP:CAL10440.1;Name=CAL10440.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10440.1;transl_table=11
AM286415.1	EMBL	sequence_feature	364813	364881	.	-	.	ID=id638;Note=2 probable transmembrane helices predicted for YE0308 by TMHMM2.0 at aa 24-46 and 61-83;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	364702	364770	.	-	.	ID=id638;Note=2 probable transmembrane helices predicted for YE0308 by TMHMM2.0 at aa 24-46 and 61-83;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	365004	366962	.	-	.	ID=gene323;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=YE0309
AM286415.1	EMBL	CDS	365004	366962	.	-	0	ID=cds296;Parent=gene323;Dbxref=EnsemblGenomes-Gn:YE0309,EnsemblGenomes-Tr:CAL10441,GOA:A1JIK3,InterPro:IPR000873,InterPro:IPR011904,InterPro:IPR020845,InterPro:IPR025110,NCBI_GP:CAL10441.1;Name=CAL10441.1;gbkey=CDS;gene=acs;product=acetyl-coenzyme A synthetase;protein_id=CAL10441.1;transl_table=11
AM286415.1	EMBL	sequence_feature	365322	366638	.	-	.	ID=id639;Note=Pfam match to entry PF00501 AMP-binding%2CAMP-binding enzyme%2C score 458.8%2C E-value 3e-135;gbkey=misc_feature;gene=acs;inference=protein motif:PFAM:PF00501
AM286415.1	EMBL	sequence_feature	366147	366182	.	-	.	ID=id640;Note=PS00455 Putative AMP-binding domain signature.;gbkey=misc_feature;gene=acs;inference=protein motif:Prosite:PS00455
AM286415.1	EMBL	gene	367882	369195	.	+	.	ID=gene324;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=YE0310
AM286415.1	EMBL	CDS	367882	369195	.	+	0	ID=cds297;Parent=gene324;Dbxref=EnsemblGenomes-Gn:YE0310,EnsemblGenomes-Tr:CAL10442,GOA:A1JIK4,InterPro:IPR001991,InterPro:IPR018107,UniProtKB/TrEMBL:A1JIK4,NCBI_GP:CAL10442.1;Name=CAL10442.1;gbkey=CDS;gene=gltP;product=proton glutamate symport protein;protein_id=CAL10442.1;transl_table=11
AM286415.1	EMBL	sequence_feature	367900	367968	.	+	.	ID=id641;Note=8 probable transmembrane helices predicted for YE0310 by TMHMM2.0 at aa 7-29%2C 49-71%2C 84-106%2C 160-177%2C206-228%2C 233-255%2C 326-348 and 363-385;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	368026	368094	.	+	.	ID=id641;Note=8 probable transmembrane helices predicted for YE0310 by TMHMM2.0 at aa 7-29%2C 49-71%2C 84-106%2C 160-177%2C206-228%2C 233-255%2C 326-348 and 363-385;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	368131	368199	.	+	.	ID=id641;Note=8 probable transmembrane helices predicted for YE0310 by TMHMM2.0 at aa 7-29%2C 49-71%2C 84-106%2C 160-177%2C206-228%2C 233-255%2C 326-348 and 363-385;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	368359	368412	.	+	.	ID=id641;Note=8 probable transmembrane helices predicted for YE0310 by TMHMM2.0 at aa 7-29%2C 49-71%2C 84-106%2C 160-177%2C206-228%2C 233-255%2C 326-348 and 363-385;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	368497	368565	.	+	.	ID=id641;Note=8 probable transmembrane helices predicted for YE0310 by TMHMM2.0 at aa 7-29%2C 49-71%2C 84-106%2C 160-177%2C206-228%2C 233-255%2C 326-348 and 363-385;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	368578	368646	.	+	.	ID=id641;Note=8 probable transmembrane helices predicted for YE0310 by TMHMM2.0 at aa 7-29%2C 49-71%2C 84-106%2C 160-177%2C206-228%2C 233-255%2C 326-348 and 363-385;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	368857	368925	.	+	.	ID=id641;Note=8 probable transmembrane helices predicted for YE0310 by TMHMM2.0 at aa 7-29%2C 49-71%2C 84-106%2C 160-177%2C206-228%2C 233-255%2C 326-348 and 363-385;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	368968	369036	.	+	.	ID=id641;Note=8 probable transmembrane helices predicted for YE0310 by TMHMM2.0 at aa 7-29%2C 49-71%2C 84-106%2C 160-177%2C206-228%2C 233-255%2C 326-348 and 363-385;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	367903	369114	.	+	.	ID=id642;Note=Pfam match to entry PF00375 SDF%2CSodium:dicarboxylate symporter family%2C score 723.0%2CE-value 8.8e-215;gbkey=misc_feature;gene=gltP;inference=protein motif:PFAM:PF00375
AM286415.1	EMBL	sequence_feature	368008	368055	.	+	.	ID=id643;Note=PS00713 Sodium:dicarboxylate symporter family signature 1.;gbkey=misc_feature;gene=gltP;inference=protein motif:Prosite:PS00713
AM286415.1	EMBL	sequence_feature	368797	368868	.	+	.	ID=id644;Note=PS00714 Sodium:dicarboxylate symporter family signature 2.;gbkey=misc_feature;gene=gltP;inference=protein motif:Prosite:PS00714
AM286415.1	EMBL	gene	369338	369970	.	-	.	ID=gene325;Name=YE0311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0311
AM286415.1	EMBL	CDS	369338	369970	.	-	0	ID=cds298;Parent=gene325;Dbxref=EnsemblGenomes-Gn:YE0311,EnsemblGenomes-Tr:CAL10443,GOA:A1JIK5,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JIK5,NCBI_GP:CAL10443.1;Name=CAL10443.1;gbkey=CDS;product=putative two-component response regulator;protein_id=CAL10443.1;transl_table=11
AM286415.1	EMBL	sequence_feature	369344	369535	.	-	.	ID=id645;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 73.5%2C E-value 3e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	369401	369484	.	-	.	ID=id646;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	sequence_feature	369599	369964	.	-	.	ID=id647;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 125.8%2C E-value 5.3e-35;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	370458	371078	.	+	.	ID=gene326;Name=YE0312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0312
AM286415.1	EMBL	CDS	370458	371078	.	+	0	ID=cds299;Parent=gene326;Dbxref=EnsemblGenomes-Gn:YE0312,EnsemblGenomes-Tr:CAL10444,GOA:A1JIK6,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR020449,UniProtKB/TrEMBL:A1JIK6,NCBI_GP:CAL10444.1;Name=CAL10444.1;gbkey=CDS;product=putative AraC-family regulatory protein;protein_id=CAL10444.1;transl_table=11
AM286415.1	EMBL	sequence_feature	370779	370916	.	+	.	ID=id648;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 6.5%2C E-value 0.53;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	370935	371066	.	+	.	ID=id649;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 31.5%2C E-value 1.3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	pseudogene	371296	372123	.	+	.	ID=gene327;Name=YE0313;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0313;pseudo=true
AM286415.1	EMBL	CDS	371296	372123	.	+	0	ID=cds300;Parent=gene327;Dbxref=PSEUDO:CAL10445.2;Note=The 5' end of this CDS appears to have been deleted;gbkey=CDS;product=inner membrane protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	371353	371421	.	+	.	ID=id650;Note=7 probable transmembrane helices predicted for YE0313 by TMHMM2.0 at aa 20-42%2C 68-87%2C 92-109%2C 130-152%2C157-179%2C 192-212 and 232-254;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	371497	371556	.	+	.	ID=id650;Note=7 probable transmembrane helices predicted for YE0313 by TMHMM2.0 at aa 20-42%2C 68-87%2C 92-109%2C 130-152%2C157-179%2C 192-212 and 232-254;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	371569	371622	.	+	.	ID=id650;Note=7 probable transmembrane helices predicted for YE0313 by TMHMM2.0 at aa 20-42%2C 68-87%2C 92-109%2C 130-152%2C157-179%2C 192-212 and 232-254;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	371683	371751	.	+	.	ID=id650;Note=7 probable transmembrane helices predicted for YE0313 by TMHMM2.0 at aa 20-42%2C 68-87%2C 92-109%2C 130-152%2C157-179%2C 192-212 and 232-254;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	371764	371832	.	+	.	ID=id650;Note=7 probable transmembrane helices predicted for YE0313 by TMHMM2.0 at aa 20-42%2C 68-87%2C 92-109%2C 130-152%2C157-179%2C 192-212 and 232-254;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	371869	371931	.	+	.	ID=id650;Note=7 probable transmembrane helices predicted for YE0313 by TMHMM2.0 at aa 20-42%2C 68-87%2C 92-109%2C 130-152%2C157-179%2C 192-212 and 232-254;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	371989	372057	.	+	.	ID=id650;Note=7 probable transmembrane helices predicted for YE0313 by TMHMM2.0 at aa 20-42%2C 68-87%2C 92-109%2C 130-152%2C157-179%2C 192-212 and 232-254;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	372183	372404	.	+	.	ID=gene328;Name=YE0314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0314
AM286415.1	EMBL	CDS	372183	372404	.	+	0	ID=cds301;Parent=gene328;Dbxref=EnsemblGenomes-Gn:YE0314,EnsemblGenomes-Tr:CAL10446,InterPro:IPR001455,UniProtKB/TrEMBL:A1JIK7,NCBI_GP:CAL10446.1;Name=CAL10446.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10446.1;transl_table=11
AM286415.1	EMBL	sequence_feature	372183	372401	.	+	.	ID=id651;Note=Pfam match to entry PF01206 UPF0033%2CUncharacterized protein family UPF0033%2C score 145.4%2CE-value 6.5e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF01206
AM286415.1	EMBL	sequence_feature	372198	372236	.	+	.	ID=id652;Note=PS01148 Uncharacterized protein family UPF0033 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01148
AM286415.1	EMBL	gene	372693	373490	.	-	.	ID=gene329;Name=YE0315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0315
AM286415.1	EMBL	CDS	372693	373490	.	-	0	ID=cds302;Parent=gene329;Dbxref=EnsemblGenomes-Gn:YE0315,EnsemblGenomes-Tr:CAL10447,GOA:A1JIK8,InterPro:IPR006260,UniProtKB/TrEMBL:A1JIK8,NCBI_GP:CAL10447.1;Name=CAL10447.1;Note=Similar to many TonB membrane transport proteins: Pseudomonas putida TonB protein SWALL:TONB_PSEPU (SWALL:Q05613) (243 aa) fasta scores: E(): 2.3e-17%2C 36.88 id in 244 aa%2C Pseudomonas putida TonB SWALL:Q93PQ7 (EMBL:AF315582) (243 aa) fasta scores: E(): 4.6e-18%2C36.88 38d in 244 aa%2C and to Salmonella typhimurium TonB or Stm1737 SWALL:TONB_SALTY (SWALL:P25945) (242 aa) fasta scores: E(): 0.00013%2C 28.94 38d in 228 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q05613;product=putative membrane protein;protein_id=CAL10447.1;transl_table=11
AM286415.1	EMBL	sequence_feature	373356	373424	.	-	.	ID=id653;Note=1 probable transmembrane helix predicted for YE0315 by TMHMM2.0 at aa 23-45;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	373868	374410	.	+	.	ID=gene330;Name=YE0316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0316
AM286415.1	EMBL	CDS	373868	374410	.	+	0	ID=cds303;Parent=gene330;Dbxref=EnsemblGenomes-Gn:YE0316,EnsemblGenomes-Tr:CAL10448,GOA:A1JIK9,InterPro:IPR007627,InterPro:IPR011991,InterPro:IPR013249,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,UniProtKB/TrEMBL:A1JIK9,NCBI_GP:CAL10448.1;Name=CAL10448.1;Note=Similar to many proposed RNA polymerase sigma factors including: Escherichia coli probable FecI or b4293 SWALL:FECI_ECOLI (SWALL:P23484) (173 aa) fasta scores: E(): 1e-11%2C 31.84 38d in 179 aa%2C Pseudomonas aeruginosa putative Pa1300 SWALL:Q9I444 (EMBL:AE004559) (175 aa) fasta scores: E(): 2.5e-29%2C 51.72 38d in 174 aa and Shigella flexneri 2a FecI SWALL:AAL08458 (EMBL:AF326777) (173 aa) fasta scores: E(): 1e-11%2C 31.84 38d in 179 aa. Also similar to several Iron uptake regulators including:Bordetella pertussis heme uptake regulator HurI SWALL:AAM34715 (EMBL:AF508979) (169 aa) fasta scores: E(): 3.8e-11%2C 32.51 38d in 163 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P23484;product=putative DNA-binding protein;protein_id=CAL10448.1;transl_table=11
AM286415.1	EMBL	sequence_feature	374282	374347	.	+	.	ID=id654;Note=Predicted helix-turn-helix motif with score 1853.000%2C SD 5.50 at aa 181-202%2C sequence LSQIEVAERMGISVSMVEKHIA;gbkey=misc_feature
AM286415.1	EMBL	gene	374403	375368	.	+	.	ID=gene331;Name=YE0317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0317
AM286415.1	EMBL	CDS	374403	375368	.	+	0	ID=cds304;Parent=gene331;Dbxref=EnsemblGenomes-Gn:YE0317,EnsemblGenomes-Tr:CAL10449,InterPro:IPR006860,InterPro:IPR012373,UniProtKB/TrEMBL:A1JIL0,NCBI_GP:CAL10449.1;Name=CAL10449.1;Note=Similar to many two-component system sensor proteins including: Escherichia coli protein FecR controlling iron dicitrate transport SWALL:FECR_ECOLI (SWALL:P23485) (317 aa) fasta scores: E(): 3.5e-10%2C 24.24 id in 297 aa%2C and to Pseudomonas aeruginosa probable transmembrane sensor Pa1301 SWALL:Q9I443 (EMBL:AE004559) (327 aa) fasta scores: E(): 3.1e-37%2C 39.74 38d in 312 aa%2Cand to Agrobacterium tumefaciens transmembrane sensor Atu5310 or agr_pat_bx251 SWALL:Q8UK14 (EMBL:AE008953) (311 aa) fasta scores: E(): 5.5e-17%2C 27.5 38d in 309 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P23485;product=putative two-component system sensor protein;protein_id=CAL10449.1;transl_table=11
AM286415.1	EMBL	gene	375471	378245	.	+	.	ID=gene332;Name=YE0318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0318
AM286415.1	EMBL	CDS	375471	378245	.	+	0	ID=cds305;Parent=gene332;Dbxref=EnsemblGenomes-Gn:YE0318,EnsemblGenomes-Tr:CAL10450,GOA:A1JIL1,InterPro:IPR000531,InterPro:IPR011662,InterPro:IPR012910,UniProtKB/TrEMBL:A1JIL1,NCBI_GP:CAL10450.1;Name=CAL10450.1;Note=Similar to many including: Pseudomonas putida ferric-pseudobactin 358 receptor precursor PupA SWALL:PUPA_PSEPU (SWALL:P25184) (819 aa) fasta scores: E(): 2.8e-05%2C 22.09 38d in 543 aa%2C Haemophilus influenzae hypothetical protein Hi1369 SWALL:YDDB_HAEIN (SWALL:P45182) (839 aa) fasta scores: E(): 2e-41%2C 28.09 id in 833 aa and Escherichia coli hypothetical protein YddB or b1495 SWALL:YDDB_ECOLI (SWALL:P31827) (790 aa) fasta scores: E(): 3.5e-25%2C 29.04 38d in 785 aa.;gbkey=CDS;inference=similar to sequence:UniProtKB:P45182;product=putative exported iron receptor protein;protein_id=CAL10450.1;transl_table=11
AM286415.1	EMBL	sequence_feature	377583	377630	.	+	.	ID=id655;Note=PS00036 bZIP transcription factors basic domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00036
AM286415.1	EMBL	signal_peptide	378334	378483	.	+	.	ID=id656;Note=Signal peptide predicted for YE0319 by SignalP 2.0 HMM (Signal peptide probabilty 0.676) with cleavage site probability 0.417 between residues 50 and 51;gbkey=sig_peptide
AM286415.1	EMBL	gene	378373	380079	.	+	.	ID=gene333;Name=YE0319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0319
AM286415.1	EMBL	CDS	378373	380079	.	+	0	ID=cds306;Parent=gene333;Dbxref=EnsemblGenomes-Gn:YE0319,EnsemblGenomes-Tr:CAL10451,GOA:A1JIL2,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010509,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JIL2,NCBI_GP:CAL10451.1;Name=CAL10451.1;Note=Similar to Haemophilus influenzae high-affinity zinc uptake system ATP-binding protein ZnuC or hi0408 SWALL:ZNUC_HAEIN (SWALL:P44692) (268 aa) fasta scores: E(): 5.3e-08%2C 35.59 38d in 177 aa%2C and to Escherichia coli O157:H7 putative ATP-binding component of a transport system YddA or z2212 or ecs2101 SWALL:Q8XAW0 (EMBL:AE005355) (561 aa) fasta scores: E(): 3.4e-53%2C35.29 38d in 544 aa%2C and to Escherichia coli%2C and Escherichia coli O157:H7 high-affinity zinc uptake system ATP-binding protein znuc znuc or b1858 or z2910 or ecs2568 SWALL:ZNUC_ECOLI (SWALL:P52648) (251 aa) fasta scores: E(): 1.8e-06%2C 34.48 38d in 174 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P52648;product=putative membrane transport protein ATP-binding component;protein_id=CAL10451.1;transl_table=11
AM286415.1	EMBL	sequence_feature	378430	378498	.	+	.	ID=id657;Note=5 probable transmembrane helices predicted for YE0319 by TMHMM2.0 at aa 33-55%2C 75-97%2C 159-181%2C 196-218 and 281-303;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	378556	378624	.	+	.	ID=id657;Note=5 probable transmembrane helices predicted for YE0319 by TMHMM2.0 at aa 33-55%2C 75-97%2C 159-181%2C 196-218 and 281-303;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	378808	378876	.	+	.	ID=id657;Note=5 probable transmembrane helices predicted for YE0319 by TMHMM2.0 at aa 33-55%2C 75-97%2C 159-181%2C 196-218 and 281-303;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	378919	378987	.	+	.	ID=id657;Note=5 probable transmembrane helices predicted for YE0319 by TMHMM2.0 at aa 33-55%2C 75-97%2C 159-181%2C 196-218 and 281-303;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	379174	379242	.	+	.	ID=id657;Note=5 probable transmembrane helices predicted for YE0319 by TMHMM2.0 at aa 33-55%2C 75-97%2C 159-181%2C 196-218 and 281-303;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	379528	380034	.	+	.	ID=id658;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 149.5%2C E-value 3.8e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	379549	379572	.	+	.	ID=id659;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	379813	379857	.	+	.	ID=id660;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	380064	382850	.	+	.	ID=gene334;Name=YE0320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0320
AM286415.1	EMBL	CDS	380064	382850	.	+	0	ID=cds307;Parent=gene334;Dbxref=EnsemblGenomes-Gn:YE0320,EnsemblGenomes-Tr:CAL10452,GOA:A1JIL3,InterPro:IPR001431,InterPro:IPR007863,InterPro:IPR011237,InterPro:IPR011249,InterPro:IPR011765,UniProtKB/TrEMBL:A1JIL3,NCBI_GP:CAL10452.1;Name=CAL10452.1;Note=Similar to many proposed Zinc proteases including: Escherichia coli probable zinc protease PqqL or b1494 SWALL:PQQL_ECOLI (SWALL:P31828) (931 aa) fasta scores: E(): 6.4e-50%2C 26.11 38d in 938 aa and Haemophilus influenzae probable zinc protease PqqL or hi1368 SWALL:PQQL_HAEIN (SWALL:P45181) (926 aa) fasta scores: E(): 3.6e-52%2C 24.01 38d in 937 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45181;product=probable exported Zinc protease;protein_id=CAL10452.1;transl_table=11
AM286415.1	EMBL	sequence_feature	380190	380621	.	+	.	ID=id661;Note=Pfam match to entry PF00675 Peptidase_M16%2CInsulinase (Peptidase family M16)%2C score 83.6%2C E-value 2.5e-22;gbkey=misc_feature;inference=protein motif:PFAM:PF00675
AM286415.1	EMBL	sequence_feature	380253	380324	.	+	.	ID=id662;Note=PS00143 Insulinase family%2C zinc-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00143
AM286415.1	EMBL	gene	382982	383233	.	+	.	ID=gene335;Name=YE0321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0321
AM286415.1	EMBL	CDS	382982	383233	.	+	0	ID=cds308;Parent=gene335;Dbxref=EnsemblGenomes-Gn:YE0321,EnsemblGenomes-Tr:CAL10453,InterPro:IPR006442,UniProtKB/TrEMBL:A1JIL4,NCBI_GP:CAL10453.1;Name=CAL10453.1;Note=Similar to Escherichia coli hypothetical protein YefM or b2017 SWALL:YEFM_ECOLI (SWALL:P46147) (83 aa) fasta scores: E(): 2.8e-23%2C 76.54 38d in 81 aa and to Rhodococcus erythropolis hypothetical protein SWALL:AAK11726 (EMBL:AY026386) (85 aa) fasta scores: E(): 1.5e-11%2C 44.44 38d in 81 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P46147;product=conserved hypothetical protein;protein_id=CAL10453.1;transl_table=11
AM286415.1	EMBL	sequence_feature	382985	383227	.	+	.	ID=id663;Note=Pfam match to entry PF02604 DUF172%2C Uncharacterized ACR%2C COG2161%2C score 126.1%2C E-value 4.3e-35;gbkey=misc_feature;inference=protein motif:PFAM:PF02604
AM286415.1	EMBL	gene	383508	386036	.	-	.	ID=gene336;Name=YE0322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0322
AM286415.1	EMBL	CDS	383508	386036	.	-	0	ID=cds309;Parent=gene336;Dbxref=EnsemblGenomes-Gn:YE0322,EnsemblGenomes-Tr:CAL10454,GOA:A1JIL5,InterPro:IPR006685,InterPro:IPR010920,InterPro:IPR011014,InterPro:IPR011066,InterPro:IPR022249,UniProtKB/TrEMBL:A1JIL5,NCBI_GP:CAL10454.1;Name=CAL10454.1;Note=Similar to several proposed proteins of unknown function and efflux proteins including: Escherichia coli potassium efflux system KefA or b0465 SWALL:KEFA_ECOLI (SWALL:P77338) (1120 aa) fasta scores: E(): 3.1e-19%2C24.28 38d in 803 aa and to Pseudomonas aeruginosa hypothetical protein Pa1408 pa1408 SWALL:Q9I3T6 (EMBL:AE004570) (807 aa) fasta scores: E(): 4.7e-100%2C41.48 38d in 793 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77338;product=putative inner-membrane transport protein;protein_id=CAL10454.1;transl_table=11
AM286415.1	EMBL	sequence_feature	383547	384152	.	-	.	ID=id664;Note=Pfam match to entry PF00924 MS_channel%2CMechanosensitive ion channel%2C score 164.9%2C E-value 8.9e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF00924
AM286415.1	EMBL	sequence_feature	385950	386018	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	385839	385907	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	385359	385412	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	385206	385274	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	385077	385145	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	384966	385034	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	384759	384827	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	384618	384686	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	384531	384599	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	384336	384404	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	384219	384287	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	384093	384161	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	384015	384074	.	-	.	ID=id665;Note=13 probable transmembrane helices predicted for YE0322 by TMHMM2.0 at aa 7-29%2C 44-66%2C 209-226%2C 255-277%2C298-320%2C 335-357%2C 404-426%2C 451-473%2C 480-502%2C 545-567%2C584-606%2C 626-648 and 655-674;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	gene	386263	388395	.	+	.	ID=gene337;Name=foxA;gbkey=Gene;gene=foxA;gene_biotype=protein_coding;locus_tag=YE0323
AM286415.1	EMBL	CDS	386263	388395	.	+	0	ID=cds310;Parent=gene337;Dbxref=EnsemblGenomes-Gn:YE0323,EnsemblGenomes-Tr:CAL10455,GOA:A1JIL6,InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR010917,InterPro:IPR012910,UniProtKB/TrEMBL:A1JIL6,NCBI_GP:CAL10455.1;Name=CAL10455.1;Note=Previously sequenced as Yersinia enterocolitica ferrioxamine receptor precursor FoxA SWALL:FOXA_YEREN (SWALL:Q01674) (710 aa) fasta scores: E(): 0%2C 99.29 38d in 710 aa. Also highly similar to Salmonella typhimurium ferrioxamine B receptor precursor FoxA or stm0364 SWALL:FOXA_SALTY (SWALL:Q56145) (702 aa) fasta scores: E(): 4.3e-96%2C 41.33 38d in 704 aa and to Erwinia chrysanthemi ferrichrysobactin receptor precursor Fct SWALL:FCT_ERWCH (SWALL:Q47162) (735 aa) fasta scores: E(): 5.3e-70%2C 37.08 38d in 728 aa;gbkey=CDS;gene=foxA;inference=similar to sequence:UniProtKB:Q56145;product=ferrioxamine receptor precursor;protein_id=CAL10455.1;transl_table=11
AM286415.1	EMBL	sequence_feature	386263	386367	.	+	.	ID=id666;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;gene=foxA;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	sequence_feature	388066	388392	.	+	.	ID=id667;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 130.0%2CE-value 2.9e-36;gbkey=misc_feature;gene=foxA;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	sequence_feature	388339	388392	.	+	.	ID=id668;Note=PS01156 TonB-dependent receptor proteins signature 2.;gbkey=misc_feature;gene=foxA;inference=protein motif:Prosite:PS01156
AM286415.1	EMBL	gene	388865	390373	.	+	.	ID=gene338;Name=YE0324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0324
AM286415.1	EMBL	CDS	388865	390373	.	+	0	ID=cds311;Parent=gene338;Dbxref=EnsemblGenomes-Gn:YE0324,EnsemblGenomes-Tr:CAL10456,GOA:A1JIL7,InterPro:IPR000524,InterPro:IPR004839,InterPro:IPR011991,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JIL7,NCBI_GP:CAL10456.1;Name=CAL10456.1;Note=Similar to many including: Pseudomonas aeruginosa probable transcriptional regulator Pa2032 SWALL:Q9I283 (EMBL:AE004629) (474 aa) fasta scores: E(): 1.2e-119%2C64.25 38d in 470 aa%2C Escherichia coli O157:H7 putative regulator YjiR or z5941 or ecs5302 SWALL:Q8XB83 (EMBL:AE005665) (470 aa) fasta scores: E(): 2.9e-104%2C56.47 38d in 471 aa%2C and Escherichia coli hypothetical protein YdcR or b1439 SWALL:YDCR_ECOLI (SWALL:P77730) (468 aa) fasta scores: E(): 2.9e-47%2C 33.68 38d in 472 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77730;product=putative ATP/GTP-binding protein;protein_id=CAL10456.1;transl_table=11
AM286415.1	EMBL	sequence_feature	388883	389062	.	+	.	ID=id669;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 55.3%2C E-value 8.5e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	sequence_feature	389333	390247	.	+	.	ID=id670;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 28.0%2C E-value 3.2e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	390233	390256	.	+	.	ID=id671;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	390519	391319	.	-	.	ID=gene339;Name=hemV;gbkey=Gene;gene=hemV;gene_biotype=protein_coding;locus_tag=YE0327
AM286415.1	EMBL	CDS	390519	391319	.	-	0	ID=cds312;Parent=gene339;Dbxref=EnsemblGenomes-Gn:YE0327,EnsemblGenomes-Tr:CAL10457,GOA:A1JIL8,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR015863,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JIL8,NCBI_GP:CAL10457.1;Name=CAL10457.1;gbkey=CDS;gene=hemV;product=hemin transport system ATP-binding protein;protein_id=CAL10457.1;transl_table=11
AM286415.1	EMBL	sequence_feature	390648	391211	.	-	.	ID=id672;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 136.0%2C E-value 4.4e-38;gbkey=misc_feature;gene=hemV;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	390852	390896	.	-	.	ID=id673;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=hemV;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	391167	391190	.	-	.	ID=id674;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=hemV;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	391312	392316	.	-	.	ID=gene340;Name=hemU;gbkey=Gene;gene=hemU;gene_biotype=protein_coding;locus_tag=YE0328
AM286415.1	EMBL	CDS	391312	392316	.	-	0	ID=cds313;Parent=gene340;Dbxref=EnsemblGenomes-Gn:YE0328,EnsemblGenomes-Tr:CAL10458,GOA:A1JIL9,InterPro:IPR000522,InterPro:IPR029022,UniProtKB/TrEMBL:A1JIL9,NCBI_GP:CAL10458.1;Name=CAL10458.1;gbkey=CDS;gene=hemU;product=hemin transport system permease protein HmuU;protein_id=CAL10458.1;transl_table=11
AM286415.1	EMBL	sequence_feature	391336	392232	.	-	.	ID=id675;Note=Pfam match to entry PF01032 FecCD%2C FecCD transport family%2C score 495.9%2C E-value 2e-146;gbkey=misc_feature;gene=hemU;inference=protein motif:PFAM:PF01032
AM286415.1	EMBL	sequence_feature	392215	392283	.	-	.	ID=id676;Note=8 probable transmembrane helices predicted for YE0328 by TMHMM2.0 at aa 12-34%2C 54-76%2C 89-108%2C 113-135%2C148-170%2C 190-212%2C 239-261 and 307-326;gbkey=misc_feature;gene=hemU;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	392089	392157	.	-	.	ID=id676;Note=8 probable transmembrane helices predicted for YE0328 by TMHMM2.0 at aa 12-34%2C 54-76%2C 89-108%2C 113-135%2C148-170%2C 190-212%2C 239-261 and 307-326;gbkey=misc_feature;gene=hemU;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	391993	392052	.	-	.	ID=id676;Note=8 probable transmembrane helices predicted for YE0328 by TMHMM2.0 at aa 12-34%2C 54-76%2C 89-108%2C 113-135%2C148-170%2C 190-212%2C 239-261 and 307-326;gbkey=misc_feature;gene=hemU;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	391912	391980	.	-	.	ID=id676;Note=8 probable transmembrane helices predicted for YE0328 by TMHMM2.0 at aa 12-34%2C 54-76%2C 89-108%2C 113-135%2C148-170%2C 190-212%2C 239-261 and 307-326;gbkey=misc_feature;gene=hemU;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	391807	391875	.	-	.	ID=id676;Note=8 probable transmembrane helices predicted for YE0328 by TMHMM2.0 at aa 12-34%2C 54-76%2C 89-108%2C 113-135%2C148-170%2C 190-212%2C 239-261 and 307-326;gbkey=misc_feature;gene=hemU;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	391681	391749	.	-	.	ID=id676;Note=8 probable transmembrane helices predicted for YE0328 by TMHMM2.0 at aa 12-34%2C 54-76%2C 89-108%2C 113-135%2C148-170%2C 190-212%2C 239-261 and 307-326;gbkey=misc_feature;gene=hemU;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	391534	391602	.	-	.	ID=id676;Note=8 probable transmembrane helices predicted for YE0328 by TMHMM2.0 at aa 12-34%2C 54-76%2C 89-108%2C 113-135%2C148-170%2C 190-212%2C 239-261 and 307-326;gbkey=misc_feature;gene=hemU;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	391339	391398	.	-	.	ID=id676;Note=8 probable transmembrane helices predicted for YE0328 by TMHMM2.0 at aa 12-34%2C 54-76%2C 89-108%2C 113-135%2C148-170%2C 190-212%2C 239-261 and 307-326;gbkey=misc_feature;gene=hemU;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	391450	391482	.	-	.	ID=id677;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hemU;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	392313	393152	.	-	.	ID=gene341;Name=hemT;gbkey=Gene;gene=hemT;gene_biotype=protein_coding;locus_tag=YE0329
AM286415.1	EMBL	CDS	392313	393152	.	-	0	ID=cds314;Parent=gene341;Dbxref=EnsemblGenomes-Gn:YE0329,EnsemblGenomes-Tr:CAL10459,InterPro:IPR002491,UniProtKB/TrEMBL:A1JIM0,NCBI_GP:CAL10459.1;Name=CAL10459.1;gbkey=CDS;gene=hemT;product=hemin-binding periplasmic protein;protein_id=CAL10459.1;transl_table=11
AM286415.1	EMBL	sequence_feature	392388	393083	.	-	.	ID=id678;Note=Pfam match to entry PF01497 Peripla_BP_2%2CPeriplasmic binding protein%2C score 210.7%2C E-value 1.4e-60;gbkey=misc_feature;gene=hemT;inference=protein motif:PFAM:PF01497
AM286415.1	EMBL	sequence_feature	393102	393134	.	-	.	ID=id679;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hemT;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	393149	394186	.	-	.	ID=gene342;Name=hemS;gbkey=Gene;gene=hemS;gene_biotype=protein_coding;locus_tag=YE0330
AM286415.1	EMBL	CDS	393149	394186	.	-	0	ID=cds315;Parent=gene342;Dbxref=EnsemblGenomes-Gn:YE0330,EnsemblGenomes-Tr:CAL10460,GOA:A1JIM1,InterPro:IPR007845,UniProtKB/TrEMBL:A1JIM1,NCBI_GP:CAL10460.1;Name=CAL10460.1;gbkey=CDS;gene=hemS;product=hemin transport protein;protein_id=CAL10460.1;transl_table=11
AM286415.1	EMBL	gene	394303	396366	.	-	.	ID=gene343;Name=hemR;gbkey=Gene;gene=hemR;gene_biotype=protein_coding;locus_tag=YE0331
AM286415.1	EMBL	CDS	394303	396366	.	-	0	ID=cds316;Parent=gene343;Dbxref=EnsemblGenomes-Gn:YE0331,EnsemblGenomes-Tr:CAL10461,GOA:A1JIM2,InterPro:IPR000531,InterPro:IPR010916,InterPro:IPR010949,InterPro:IPR011276,InterPro:IPR012910,UniProtKB/TrEMBL:A1JIM2,NCBI_GP:CAL10461.1;Name=CAL10461.1;gbkey=CDS;gene=hemR;product=hemin receptor precursor;protein_id=CAL10461.1;transl_table=11
AM286415.1	EMBL	sequence_feature	394306	394611	.	-	.	ID=id680;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 76.4%2C E-value 3.9e-20;gbkey=misc_feature;gene=hemR;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	sequence_feature	396214	396366	.	-	.	ID=id681;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;gene=hemR;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	gene	396539	396784	.	-	.	ID=gene344;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=YE0332
AM286415.1	EMBL	CDS	396539	396784	.	-	0	ID=cds317;Parent=gene344;Dbxref=EnsemblGenomes-Gn:YE0332,EnsemblGenomes-Tr:CAL10462,InterPro:IPR019600,UniProtKB/TrEMBL:A1JIM3,NCBI_GP:CAL10462.1;Name=CAL10462.1;Note=Previously sequenced as: Yersinia enterocolitica hemin uptake protein HemP SWALL:HEMP_YEREN (SWALL:P31516) (81 aa) fasta scores: E(): 1.3e-31%2C 100 38d in 81 aa. Also similar to Salmonella typhimurium%2C and Salmonella typhi putative cytoplasmic protein YdiE or stm1346 or sty1764 SWALL:Q8XGW6 (EMBL:AE008758) (63 aa) fasta scores: E(): 0.019%2C 41.27 38d in 63 aa;gbkey=CDS;gene=hemP;inference=similar to sequence:UniProtKB:P31516;product=hemin uptake protein;protein_id=CAL10462.1;transl_table=11
AM286415.1	EMBL	gene	396816	397466	.	-	.	ID=gene345;Name=YE0333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0333
AM286415.1	EMBL	CDS	396816	397466	.	-	0	ID=cds318;Parent=gene345;Dbxref=EnsemblGenomes-Gn:YE0333,EnsemblGenomes-Tr:CAL10463,InterPro:IPR016040,UniProtKB/TrEMBL:A1JIM4,NCBI_GP:CAL10463.1;Name=CAL10463.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10463.1;transl_table=11
AM286415.1	EMBL	gene	397463	398008	.	-	.	ID=gene346;Name=YE0334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0334
AM286415.1	EMBL	CDS	397463	398008	.	-	0	ID=cds319;Parent=gene346;Dbxref=EnsemblGenomes-Gn:YE0334,EnsemblGenomes-Tr:CAL10464,InterPro:IPR010413,UniProtKB/TrEMBL:A1JIM5,NCBI_GP:CAL10464.1;Name=CAL10464.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10464.1;transl_table=11
AM286415.1	EMBL	gene	398005	399318	.	-	.	ID=gene347;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=YE0335
AM286415.1	EMBL	CDS	398005	399318	.	-	0	ID=cds320;Parent=gene347;Dbxref=EnsemblGenomes-Gn:YE0335,EnsemblGenomes-Tr:CAL10465,GOA:A1JIM6,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR023404,InterPro:IPR026332,UniProtKB/TrEMBL:A1JIM6,NCBI_GP:CAL10465.1;Name=CAL10465.1;gbkey=CDS;gene=hemN;product=putative coproporphyrinogen III oxidase;protein_id=CAL10465.1;transl_table=11
AM286415.1	EMBL	sequence_feature	398287	399018	.	-	.	ID=id682;Note=Pfam match to entry PF02473 Coprogen_an_ox%2COxygen-independent Coproporphyrinogen III oxidase%2C score -17.3%2C E-value 2.3e-14;gbkey=misc_feature;gene=hemN;inference=protein motif:PFAM:PF02473
AM286415.1	EMBL	gene	399955	400947	.	+	.	ID=gene348;Name=tdcB;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=YE0336
AM286415.1	EMBL	CDS	399955	400947	.	+	0	ID=cds321;Parent=gene348;Dbxref=EnsemblGenomes-Gn:YE0336,EnsemblGenomes-Tr:CAL10466,GOA:A1JIM7,InterPro:IPR000634,InterPro:IPR001926,InterPro:IPR005789,UniProtKB/TrEMBL:A1JIM7,NCBI_GP:CAL10466.1;Name=CAL10466.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 threonine dehydratase catabolic TdcB or b3117 or z4469 or ecs3997 SWALL:THD2_ECOLI (SWALL:P05792) (329 aa) fasta scores: E(): 1.1e-96%2C 78.83 38d in 326 aa%2C and to Salmonella typhimurium threonine dehydratase catabolic TdcB or stm3244 SWALL:THD2_SALTY (SWALL:P11954) (329 aa) fasta scores: E(): 1.5e-96%2C 79.14 38d in 326 aa;gbkey=CDS;gene=tdcB;inference=similar to sequence:UniProtKB:P11954;product=threonine dehydratase catabolic;protein_id=CAL10466.1;transl_table=11
AM286415.1	EMBL	sequence_feature	400015	400893	.	+	.	ID=id683;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 299.5%2CE-value 2.6e-87;gbkey=misc_feature;gene=tdcB;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	sequence_feature	400099	400140	.	+	.	ID=id684;Note=PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=tdcB;inference=protein motif:Prosite:PS00165
AM286415.1	EMBL	sequence_feature	400204	400236	.	+	.	ID=id685;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=tdcB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	400972	402300	.	+	.	ID=gene349;Name=tdcC;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=YE0337
AM286415.1	EMBL	CDS	400972	402300	.	+	0	ID=cds322;Parent=gene349;Dbxref=EnsemblGenomes-Gn:YE0337,EnsemblGenomes-Tr:CAL10467,GOA:A1JIM8,InterPro:IPR004694,InterPro:IPR013057,InterPro:IPR023726,NCBI_GP:CAL10467.1;Name=CAL10467.1;Note=Highly similar to many threonine/serine transporters including: Escherichia coli%2C and Escherichia coli O157:H7 threonine/serine transporter TdcC or b3116 or z4468 or ecs3996 SWALL:TDCC_ECOLI (SWALL:P11867) (443 aa) fasta scores: E(): 1.4e-148%2C 85.64 38d in 439 aa and Salmonella typhimurium haaap family%2C L-threonine/ l-serine permease%2C anaerobically inducible TdcC or stm3243 SWALL:Q8ZLW1 (EMBL:AE008849) (443 aa) fasta scores: E(): 3.4e-148%2C 85.64 38d in 439 aa;gbkey=CDS;gene=tdcC;inference=similar to sequence:UniProtKB:P11867;product=threonine/serine transporter;protein_id=CAL10467.1;transl_table=11
AM286415.1	EMBL	sequence_feature	401032	401100	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	401113	401181	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	401257	401325	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	401368	401436	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	401455	401523	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	401602	401670	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	401731	401799	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	401917	401985	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	402043	402111	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	402139	402198	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	402235	402288	.	+	.	ID=id686;Note=11 probable transmembrane helices predicted for YE0337 by TMHMM2.0 at aa 21-43%2C 48-70%2C 96-118%2C 133-155%2C162-184%2C 211-233%2C 254-276%2C 316-338%2C 358-380%2C 390-409 and 422-439;gbkey=misc_feature;gene=tdcC;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	401758	401790	.	+	.	ID=id687;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=tdcC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	402319	403575	.	+	.	ID=gene350;Name=tdcD;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=YE0338
AM286415.1	EMBL	CDS	402319	403575	.	+	0	ID=cds323;Parent=gene350;Dbxref=EnsemblGenomes-Gn:YE0338,EnsemblGenomes-Tr:CAL10468,GOA:A1JIM9,InterPro:IPR000890,InterPro:IPR004372,InterPro:IPR023865,InterPro:IPR024917,NCBI_GP:CAL10468.1;Name=CAL10468.1;Note=Similar to many kinases including: Escherichia coli propionate kinase TdcD or b3115 SWALL:TDCD_ECOLI (SWALL:P11868) (402 aa) fasta scores: E(): 6.3e-102%2C66.83 38d in 389 aa%2C Salmonella typhimurium propionate kinase TdcD or oxd-2 or stm3242 SWALL:TDCD_SALTY (SWALL:O06961) (402 aa) fasta scores: E(): 1.1e-101%2C66.83 38d in 389 aa and Neisseria meningitidis acetate kinase AckA1 or nma1718 SWALL:Q9JTM0 (EMBL:AL162756) (408 aa) fasta scores: E(): 2.3e-69%2C 47.16 38d in 405 aa;gbkey=CDS;gene=tdcD;inference=similar to sequence:UniProtKB:P11868;product=propionate kinase;protein_id=CAL10468.1;transl_table=11
AM286415.1	EMBL	sequence_feature	402370	403515	.	+	.	ID=id688;Note=Pfam match to entry PF00871 Acetate_kinase%2CAcetokinase family%2C score 653.9%2C E-value 5.4e-194;gbkey=misc_feature;gene=tdcD;inference=protein motif:PFAM:PF00871
AM286415.1	EMBL	sequence_feature	402373	402408	.	+	.	ID=id689;Note=PS01075 Acetate and butyrate kinases family signature 1.;gbkey=misc_feature;gene=tdcD;inference=protein motif:Prosite:PS01075
AM286415.1	EMBL	sequence_feature	402577	402618	.	+	.	ID=id690;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=tdcD;inference=protein motif:Prosite:PS00105
AM286415.1	EMBL	sequence_feature	402949	403002	.	+	.	ID=id691;Note=PS01076 Acetate and butyrate kinases family signature 2.;gbkey=misc_feature;gene=tdcD;inference=protein motif:Prosite:PS01076
AM286415.1	EMBL	gene	403626	405920	.	+	.	ID=gene351;Name=tdcE;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=YE0339
AM286415.1	EMBL	CDS	403626	405920	.	+	0	ID=cds324;Parent=gene351;Dbxref=EnsemblGenomes-Gn:YE0339,EnsemblGenomes-Tr:CAL10469,GOA:A1JIN0,InterPro:IPR001150,InterPro:IPR004184,InterPro:IPR005949,InterPro:IPR019777,UniProtKB/TrEMBL:A1JIN0,NCBI_GP:CAL10469.1;Name=CAL10469.1;Note=Highly similar to many including: Escherichia coli keto-acid formate acetyltransferase TdcE or b3114 SWALL:TDCE_ECOLI (SWALL:P42632) (746 aa) fasta scores: E(): 0%2C 85.83 38d in 741 aa and to Yersinia pestis formate acetyltransferase 1 PflB or ypo1383 SWALL:Q8ZGC0 (EMBL:AJ414148) (760 aa) fasta scores: E(): 0%2C 75.92 38d in 756 aa;gbkey=CDS;gene=tdcE;inference=similar to sequence:UniProtKB:P42632;product=keto-acid formate acetyltransferase;protein_id=CAL10469.1;transl_table=11
AM286415.1	EMBL	sequence_feature	403812	405479	.	+	.	ID=id692;Note=Pfam match to entry PF02901 PFL%2C Pyruvate formate lyase%2C score 1026.8%2C E-value 0;gbkey=misc_feature;gene=tdcE;inference=protein motif:PFAM:PF02901
AM286415.1	EMBL	sequence_feature	405525	405863	.	+	.	ID=id693;Note=Pfam match to entry PF01228 Gly_radical%2C Glycine radical%2C score 212.3%2C E-value 4.7e-61;gbkey=misc_feature;gene=tdcE;inference=protein motif:PFAM:PF01228
AM286415.1	EMBL	gene	406648	407421	.	-	.	ID=gene352;Name=YE0341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0341
AM286415.1	EMBL	CDS	406648	407421	.	-	0	ID=cds325;Parent=gene352;Dbxref=EnsemblGenomes-Gn:YE0341,EnsemblGenomes-Tr:CAL10471,GOA:A1JIN2,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,UniProtKB/TrEMBL:A1JIN2,NCBI_GP:CAL10471.1;Name=CAL10471.1;Note=Similar to many putative oxidoreductases: Rhizobium loti glucose dehydrogenase Mlr5280 SWALL:Q98C63 (EMBL:AP003006) (250 aa) fasta scores: E(): 1.2e-39%2C44.98 38d in 249 aa and Streptomyces coelicolor putative dehydrogenase/reductase Sco2651 or sc8e4a.21C SWALL:Q9L1Y4 (EMBL:AL138662) (245 aa) fasta scores: E(): 3.2e-29%2C38.55 38d in 249 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003006;product=putative dehydrogenase/reductase;protein_id=CAL10471.1;transl_table=11
AM286415.1	EMBL	sequence_feature	406675	407403	.	-	.	ID=id694;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 217.1%2C E-value 1.7e-62;gbkey=misc_feature;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	gene	407491	408471	.	-	.	ID=gene353;Name=YE0342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0342
AM286415.1	EMBL	CDS	407491	408471	.	-	0	ID=cds326;Parent=gene353;Dbxref=EnsemblGenomes-Gn:YE0342,EnsemblGenomes-Tr:CAL10472,GOA:A1JIN3,InterPro:IPR001395,InterPro:IPR020471,InterPro:IPR023210,UniProtKB/TrEMBL:A1JIN3,NCBI_GP:CAL10472.1;Name=CAL10472.1;Note=Similar to Yersinia pestis putative aldo/keto reductase Ypo2806 SWALL:Q8ZCZ6 (EMBL:AJ414153) (329 aa) fasta scores: E(): 1.1e-80%2C 67.47 38d in 329 aa%2C and to Xanthomonas campestris pv. campestris str. ATCC 33913 oxidoreductase Xcc2679 SWALL:AAM41951 (EMBL:AE012380) (327 aa) fasta scores: E(): 1.7e-76%2C 62.69 38d in 327 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414153;product=putative aldo/keto reductase;protein_id=CAL10472.1;transl_table=11
AM286415.1	EMBL	sequence_feature	407545	408453	.	-	.	ID=id695;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 214.2%2C E-value 1.2e-61;gbkey=misc_feature;inference=protein motif:PFAM:PF00248
AM286415.1	EMBL	gene	408604	409497	.	+	.	ID=gene354;Name=YE0343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0343
AM286415.1	EMBL	CDS	408604	409497	.	+	0	ID=cds327;Parent=gene354;Dbxref=EnsemblGenomes-Gn:YE0343,EnsemblGenomes-Tr:CAL10473,GOA:A1JIN4,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JIN4,NCBI_GP:CAL10473.1;Name=CAL10473.1;Note=Similar to many proposed LysR-family transcriptional regulators including: Yersinia pestis putative LysR-family transcriptional regulatory protein PtxR or Ypo2807 SWALL:Q8ZCZ5 (EMBL:AJ414153) (297 aa) fasta scores: E(): 1.2e-63%2C 54.23 38d in 295 aa%2C and to Ralstonia solanacearum probable transcription regulator protein rsp1471 or rs03073 SWALL:Q8XQ15 (EMBL:AL646085) (297 aa) fasta scores: E(): 5.8e-71%2C 59.18 38d in 294 aa%2Cand to Xanthomonas axonopodis pv. citri str. 306 transcriptional regulator lysr family xac0302 SWALL:AAM35194 (EMBL:AE011655) (317 aa) fasta scores: E(): 4.1e-66%2C 56.27 38d in 295 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646085;product=putative lysr-family transcriptional regulatory protein;protein_id=CAL10473.1;transl_table=11
AM286415.1	EMBL	sequence_feature	408619	408798	.	+	.	ID=id696;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 109.9%2C E-value 3.3e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	408658	408723	.	+	.	ID=id697;Note=Predicted helix-turn-helix motif with score 1902.000%2C SD 5.66 at aa 19-40%2C sequence KSFTRAAAHLGVSQSAISHSIR;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	408661	408753	.	+	.	ID=id698;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	408868	409494	.	+	.	ID=id699;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 133.3%2C E-value 2.9e-37;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	pseudogene	410078	411052	.	+	.	ID=gene355;Name=YE0344;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0344;pseudo=true
AM286415.1	EMBL	CDS	410078	411052	.	+	0	ID=cds328;Parent=gene355;Note=Similar in part to Escherichia coli microcin h47 secretion protein MchE SWALL:MCHE_ECOLI (SWALL:Q9EXN6) (424 aa) fasta scores: E(): 1.4e-80%2C 70.46 38d in 325 aa and to Pasteurella haemolytica leukotoxin secretion protein D LktD SWALL:HLYD_PASHA (SWALL:P16534) (478 aa) fasta scores: E(): 4e-05%2C 25.24 38d in 313 aa. This CDS appears to lack both 5' and 3' regions and is thought to be a gene remnant.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9EXN6;product=putative HlyD-family secretion protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	410135	411061	.	+	.	ID=id700;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 32.4%2C E-value 6.9e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	pseudogene	411054	411212	.	+	.	ID=gene356;Name=YE0345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0345;pseudo=true
AM286415.1	EMBL	CDS	411054	411212	.	+	0	ID=cds329;Parent=gene356;Note=Similar to in parts to Yersinia pestis integrase Ypo0961 SWALL:Q8ZHD9 (EMBL:AJ414145) (102 aa) fasta scores: E(): 2.7e-16%2C 94.34 38d in 53 aa and Pseudomonas aeruginosa XerC SWALL:Q9F771 (EMBL:AF285416) (427 aa) fasta scores: E(): 0.0049%2C 44.18 38d in 43 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=integrase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	411468	411543	.	-	.	ID=gene357;Name=tRNA-Phe (GAA);gbkey=Gene;gene=tRNA-Phe (GAA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	411468	411543	.	-	.	ID=rna32;Parent=gene357;gbkey=tRNA;gene=tRNA-Phe (GAA);product=tRNA-Phe
AM286415.1	EMBL	exon	411468	411543	.	-	.	ID=id701;Parent=rna32;gbkey=tRNA;gene=tRNA-Phe (GAA);product=tRNA-Phe
AM286415.1	EMBL	gene	411687	412262	.	-	.	ID=gene358;Name=YE0346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0346
AM286415.1	EMBL	CDS	411687	412262	.	-	0	ID=cds330;Parent=gene358;Dbxref=EnsemblGenomes-Gn:YE0346,EnsemblGenomes-Tr:CAL10476,GOA:A1JIN5,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR015893,UniProtKB/TrEMBL:A1JIN5,NCBI_GP:CAL10476.1;Name=CAL10476.1;gbkey=CDS;product=putative TetR-family regulatory protein;protein_id=CAL10476.1;transl_table=11
AM286415.1	EMBL	sequence_feature	412077	412124	.	-	.	ID=id702;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	sequence_feature	412107	412247	.	-	.	ID=id703;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 21.9%2C E-value 4.3e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00440
AM286415.1	EMBL	gene	412574	413737	.	+	.	ID=gene359;Name=glxK;gbkey=Gene;gene=glxK;gene_biotype=protein_coding;locus_tag=YE0347
AM286415.1	EMBL	CDS	412574	413737	.	+	0	ID=cds331;Parent=gene359;Dbxref=EnsemblGenomes-Gn:YE0347,EnsemblGenomes-Tr:CAL10477,GOA:A1JIN6,InterPro:IPR004381,InterPro:IPR018193,UniProtKB/TrEMBL:A1JIN6,NCBI_GP:CAL10477.1;Name=CAL10477.1;gbkey=CDS;gene=glxK;product=putative glycerate kinase;protein_id=CAL10477.1;transl_table=11
AM286415.1	EMBL	sequence_feature	412574	413707	.	+	.	ID=id704;Note=Pfam match to entry PF02595 DUF168%2C Uncharacterized BCR%2C COG1929%2C score 795.4%2C E-value 1.4e-236;gbkey=misc_feature;gene=glxK;inference=protein motif:PFAM:PF02595
AM286415.1	EMBL	gene	413785	415521	.	-	.	ID=gene360;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;gene_synonym=cycZ;locus_tag=YE0348
AM286415.1	EMBL	CDS	413785	415521	.	-	0	ID=cds332;Parent=gene360;Dbxref=EnsemblGenomes-Gn:YE0348,EnsemblGenomes-Tr:CAL10478,GOA:A1JIN7,InterPro:IPR003834,InterPro:IPR012336,InterPro:IPR017937,InterPro:IPR022910,InterPro:IPR028250,NCBI_GP:CAL10478.1;Name=CAL10478.1;gbkey=CDS;gene=dsbD;product=thiol:disulfide interchange protein;protein_id=CAL10478.1;transl_table=11
AM286415.1	EMBL	sequence_feature	414013	414069	.	-	.	ID=id705;Note=PS00194 Thioredoxin family active site.;gbkey=misc_feature;gene=dsbD;inference=protein motif:Prosite:PS00194
AM286415.1	EMBL	sequence_feature	415441	415509	.	-	.	ID=id706;Note=9 probable transmembrane helices predicted for YE0348 by TMHMM2.0 at aa 5-27%2C 184-206%2C 219-241%2C 256-278%2C300-322%2C 342-364%2C 377-394%2C 398-417 and 424-441;gbkey=misc_feature;gene=dsbD;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	414904	414972	.	-	.	ID=id706;Note=9 probable transmembrane helices predicted for YE0348 by TMHMM2.0 at aa 5-27%2C 184-206%2C 219-241%2C 256-278%2C300-322%2C 342-364%2C 377-394%2C 398-417 and 424-441;gbkey=misc_feature;gene=dsbD;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	414799	414867	.	-	.	ID=id706;Note=9 probable transmembrane helices predicted for YE0348 by TMHMM2.0 at aa 5-27%2C 184-206%2C 219-241%2C 256-278%2C300-322%2C 342-364%2C 377-394%2C 398-417 and 424-441;gbkey=misc_feature;gene=dsbD;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	414688	414756	.	-	.	ID=id706;Note=9 probable transmembrane helices predicted for YE0348 by TMHMM2.0 at aa 5-27%2C 184-206%2C 219-241%2C 256-278%2C300-322%2C 342-364%2C 377-394%2C 398-417 and 424-441;gbkey=misc_feature;gene=dsbD;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	414556	414624	.	-	.	ID=id706;Note=9 probable transmembrane helices predicted for YE0348 by TMHMM2.0 at aa 5-27%2C 184-206%2C 219-241%2C 256-278%2C300-322%2C 342-364%2C 377-394%2C 398-417 and 424-441;gbkey=misc_feature;gene=dsbD;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	414430	414498	.	-	.	ID=id706;Note=9 probable transmembrane helices predicted for YE0348 by TMHMM2.0 at aa 5-27%2C 184-206%2C 219-241%2C 256-278%2C300-322%2C 342-364%2C 377-394%2C 398-417 and 424-441;gbkey=misc_feature;gene=dsbD;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	414340	414393	.	-	.	ID=id706;Note=9 probable transmembrane helices predicted for YE0348 by TMHMM2.0 at aa 5-27%2C 184-206%2C 219-241%2C 256-278%2C300-322%2C 342-364%2C 377-394%2C 398-417 and 424-441;gbkey=misc_feature;gene=dsbD;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	414271	414330	.	-	.	ID=id706;Note=9 probable transmembrane helices predicted for YE0348 by TMHMM2.0 at aa 5-27%2C 184-206%2C 219-241%2C 256-278%2C300-322%2C 342-364%2C 377-394%2C 398-417 and 424-441;gbkey=misc_feature;gene=dsbD;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	414199	414252	.	-	.	ID=id706;Note=9 probable transmembrane helices predicted for YE0348 by TMHMM2.0 at aa 5-27%2C 184-206%2C 219-241%2C 256-278%2C300-322%2C 342-364%2C 377-394%2C 398-417 and 424-441;gbkey=misc_feature;gene=dsbD;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	414349	414975	.	-	.	ID=id707;Note=Pfam match to entry PF02683 DsbD%2C Cytochrome C biogenesis protein transmembrane region%2C score 36.8%2CE-value 3.3e-08;gbkey=misc_feature;gene=dsbD;inference=protein motif:PFAM:PF02683
AM286415.1	EMBL	gene	415497	415799	.	-	.	ID=gene361;Name=YE0349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0349
AM286415.1	EMBL	CDS	415497	415799	.	-	0	ID=cds333;Parent=gene361;Dbxref=EnsemblGenomes-Gn:YE0349,EnsemblGenomes-Tr:CAL10479,GOA:A1JIN8,InterPro:IPR004323,InterPro:IPR011322,UniProtKB/TrEMBL:A1JIN8,NCBI_GP:CAL10479.1;Name=CAL10479.1;gbkey=CDS;product=putative cation tolerance protein;protein_id=CAL10479.1;transl_table=11
AM286415.1	EMBL	sequence_feature	415500	415799	.	-	.	ID=id708;Note=Pfam match to entry PF03091 CutA1%2C CutA1 divalent ion tolerance protein%2C score 158.3%2C E-value 8.4e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF03091
AM286415.1	EMBL	gene	416005	417306	.	-	.	ID=gene362;Name=dcuA;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;gene_synonym=b4138,genA;locus_tag=YE0350
AM286415.1	EMBL	CDS	416005	417306	.	-	0	ID=cds334;Parent=gene362;Dbxref=EnsemblGenomes-Gn:YE0350,EnsemblGenomes-Tr:CAL10480,GOA:A1JIN9,InterPro:IPR004668,UniProtKB/TrEMBL:A1JIN9,NCBI_GP:CAL10480.1;Name=CAL10480.1;gbkey=CDS;gene=dcuA;product=anaerobic C4-dicarboxylate transporter;protein_id=CAL10480.1;transl_table=11
AM286415.1	EMBL	sequence_feature	417196	417264	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	417091	417159	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	416980	417048	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	416851	416919	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	416740	416808	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	416578	416631	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	416497	416565	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	416392	416460	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	416266	416334	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	416137	416205	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	416011	416079	.	-	.	ID=id709;Note=11 probable transmembrane helices predicted for YE0350 by TMHMM2.0 at aa 15-37%2C 50-72%2C 87-109%2C 130-152%2C167-189%2C 226-243%2C 248-270%2C 283-305%2C 325-347%2C 368-390 and 410-432;gbkey=misc_feature;gene=dcuA;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	416212	417294	.	-	.	ID=id710;Note=Pfam match to entry PF03605 Dcu%2C Anaerobic c4-dicarboxylate membrane transporter%2C score 746.3%2CE-value 8.5e-222;gbkey=misc_feature;gene=dcuA;inference=protein motif:PFAM:PF03605
AM286415.1	EMBL	gene	417426	418862	.	-	.	ID=gene363;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=YE0351
AM286415.1	EMBL	CDS	417426	418862	.	-	0	ID=cds335;Parent=gene363;Dbxref=EnsemblGenomes-Gn:YE0351,EnsemblGenomes-Tr:CAL10481,GOA:A1JIP0,InterPro:IPR000362,InterPro:IPR004708,InterPro:IPR008948,InterPro:IPR018951,InterPro:IPR020557,InterPro:IPR022761,InterPro:IPR024083,UniProtKB/TrEMBL:A1JIP0,NCBI_GP:CAL10481.1;Name=CAL10481.1;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=CAL10481.1;transl_table=11
AM286415.1	EMBL	sequence_feature	417483	418826	.	-	.	ID=id711;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 705.1%2C E-value 2.1e-209;gbkey=misc_feature;gene=aspA;inference=protein motif:PFAM:PF00206
AM286415.1	EMBL	sequence_feature	417876	417905	.	-	.	ID=id712;Note=PS00163 Fumarate lyases signature.;gbkey=misc_feature;gene=aspA;inference=protein motif:Prosite:PS00163
AM286415.1	EMBL	gene	419304	419831	.	+	.	ID=gene364;Name=YE0352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0352
AM286415.1	EMBL	CDS	419304	419831	.	+	0	ID=cds336;Parent=gene364;Dbxref=EnsemblGenomes-Gn:YE0352,EnsemblGenomes-Tr:CAL10482,GOA:A1JIP1,InterPro:IPR007313,UniProtKB/TrEMBL:A1JIP1,NCBI_GP:CAL10482.1;Name=CAL10482.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10482.1;transl_table=11
AM286415.1	EMBL	sequence_feature	419313	419366	.	+	.	ID=id713;Note=3 probable transmembrane helices predicted for YE0352 by TMHMM2.0 at aa 4-21%2C 26-48 and 79-101;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	419379	419447	.	+	.	ID=id713;Note=3 probable transmembrane helices predicted for YE0352 by TMHMM2.0 at aa 4-21%2C 26-48 and 79-101;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	419538	419606	.	+	.	ID=id713;Note=3 probable transmembrane helices predicted for YE0352 by TMHMM2.0 at aa 4-21%2C 26-48 and 79-101;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	419394	419426	.	+	.	ID=id714;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	420084	420377	.	+	.	ID=gene365;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;gene_synonym=crpB,hsp10;locus_tag=YE0353
AM286415.1	EMBL	CDS	420084	420377	.	+	0	ID=cds337;Parent=gene365;Dbxref=EnsemblGenomes-Gn:YE0353,EnsemblGenomes-Tr:CAL10483,GOA:A1JIP2,InterPro:IPR011032,InterPro:IPR018369,InterPro:IPR020818,NCBI_GP:CAL10483.1;Name=CAL10483.1;gbkey=CDS;gene=groES;product=10 kDa chaperonin;protein_id=CAL10483.1;transl_table=11
AM286415.1	EMBL	sequence_feature	420084	420371	.	+	.	ID=id715;Note=Pfam match to entry PF00166 cpn10%2C Chaperonin 10 Kd subunit%2C score 184.5%2C E-value 1.1e-52;gbkey=misc_feature;gene=groES;inference=protein motif:PFAM:PF00166
AM286415.1	EMBL	sequence_feature	420090	420164	.	+	.	ID=id716;Note=PS00681 Chaperonins cpn10 signature.;gbkey=misc_feature;gene=groES;inference=protein motif:Prosite:PS00681
AM286415.1	EMBL	gene	420434	422086	.	+	.	ID=gene366;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;gene_synonym=crpA,hsp60,mopA;locus_tag=YE0354
AM286415.1	EMBL	CDS	420434	422086	.	+	0	ID=cds338;Parent=gene366;Dbxref=EnsemblGenomes-Gn:YE0354,EnsemblGenomes-Tr:CAL10484,GOA:A1JIP3,InterPro:IPR001844,InterPro:IPR002423,InterPro:IPR018370,InterPro:IPR027409,InterPro:IPR027413,NCBI_GP:CAL10484.1;Name=CAL10484.1;gbkey=CDS;gene=groEL;product=60 kDa chaperonin;protein_id=CAL10484.1;transl_table=11
AM286415.1	EMBL	sequence_feature	420500	422014	.	+	.	ID=id717;Note=Pfam match to entry PF00118 cpn60_TCP1%2C TCP-1/cpn60 chaperonin family%2C score 629.8%2C E-value 9.8e-187;gbkey=misc_feature;gene=groEL;inference=protein motif:PFAM:PF00118
AM286415.1	EMBL	sequence_feature	421646	421681	.	+	.	ID=id718;Note=PS00296 Chaperonins cpn60 signature.;gbkey=misc_feature;gene=groEL;inference=protein motif:Prosite:PS00296
AM286415.1	EMBL	gene	422468	422806	.	+	.	ID=gene367;Name=YE0355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0355
AM286415.1	EMBL	CDS	422468	422806	.	+	0	ID=cds339;Parent=gene367;Dbxref=EnsemblGenomes-Gn:YE0355,EnsemblGenomes-Tr:CAL10485,InterPro:IPR025294,UniProtKB/TrEMBL:A1JIP4,NCBI_GP:CAL10485.1;Name=CAL10485.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL10485.1;transl_table=11
AM286415.1	EMBL	sequence_feature	422489	422521	.	+	.	ID=id719;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	422874	423911	.	-	.	ID=gene368;Name=YE0356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0356
AM286415.1	EMBL	CDS	422874	423911	.	-	0	ID=cds340;Parent=gene368;Dbxref=EnsemblGenomes-Gn:YE0356,EnsemblGenomes-Tr:CAL10486,GOA:A1JIP5,InterPro:IPR003739,InterPro:IPR007197,InterPro:IPR013785,InterPro:IPR022462,UniProtKB/TrEMBL:A1JIP5,NCBI_GP:CAL10486.1;Name=CAL10486.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10486.1;transl_table=11
AM286415.1	EMBL	sequence_feature	422910	423857	.	-	.	ID=id720;Note=Pfam match to entry PF02587 DUF160%2C Radical SAM superfamily protein (COG1509)%2C score 553.1%2C E-value 1.2e-163;gbkey=misc_feature;inference=protein motif:PFAM:PF02587
AM286415.1	EMBL	gene	423947	424513	.	+	.	ID=gene369;Name=efP;gbkey=Gene;gene=efP;gene_biotype=protein_coding;gene_synonym=b4147;locus_tag=YE0357
AM286415.1	EMBL	CDS	423947	424513	.	+	0	ID=cds341;Parent=gene369;Dbxref=EnsemblGenomes-Gn:YE0357,EnsemblGenomes-Tr:CAL10487,GOA:A1JIP6,InterPro:IPR001059,InterPro:IPR008991,InterPro:IPR011768,InterPro:IPR012340,InterPro:IPR013185,InterPro:IPR013852,InterPro:IPR014722,InterPro:IPR015365,InterPro:IPR020599,NCBI_GP:CAL10487.1;Name=CAL10487.1;gbkey=CDS;gene=efP;product=elongation factor P;protein_id=CAL10487.1;transl_table=11
AM286415.1	EMBL	sequence_feature	423953	424507	.	+	.	ID=id721;Note=Pfam match to entry PF01132 EFP%2C Elongation factor P (EF-P)%2C score 395.7%2C E-value 3e-116;gbkey=misc_feature;gene=efP;inference=protein motif:PFAM:PF01132
AM286415.1	EMBL	sequence_feature	424400	424459	.	+	.	ID=id722;Note=PS01275 Elongation factor P signature.;gbkey=misc_feature;gene=efP;inference=protein motif:Prosite:PS01275
AM286415.1	EMBL	gene	424699	424830	.	+	.	ID=gene370;Name=ecnB;gbkey=Gene;gene=ecnB;gene_biotype=protein_coding;locus_tag=YE0358
AM286415.1	EMBL	CDS	424699	424830	.	+	0	ID=cds342;Parent=gene370;Dbxref=EnsemblGenomes-Gn:YE0358,EnsemblGenomes-Tr:CAL10488,GOA:A1JIP7,InterPro:IPR012556,UniProtKB/TrEMBL:A1JIP7,NCBI_GP:CAL10488.1;Name=CAL10488.1;Note=Similar to Citrobacter freundii entericidin B precursor EcnB SWALL:ECNB_CITFR (SWALL:P56550) (48 aa) fasta scores: E(): 1.2e-07%2C 64.1 38d in 39 aa and to Escherichia coli%2C and Escherichia coli O157:H7 entericidin B precursor EcnB or b4147.2 or z5754 or ecs5128.2 SWALL:ECNB_ECOLI (SWALL:P56549) (48 aa) fasta scores: E(): 3.3e-07%2C 55.81 38d in 43 aa;gbkey=CDS;gene=ecnB;inference=similar to sequence:UniProtKB:P56550;product=entericidin B precursor;protein_id=CAL10488.1;transl_table=11
AM286415.1	EMBL	sequence_feature	424729	424761	.	+	.	ID=id723;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ecnB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	425009	425323	.	+	.	ID=gene371;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=YE0359
AM286415.1	EMBL	CDS	425009	425323	.	+	0	ID=cds343;Parent=gene371;Dbxref=EnsemblGenomes-Gn:YE0359,EnsemblGenomes-Tr:CAL10489,GOA:A1JIP8,InterPro:IPR000390,UniProtKB/TrEMBL:A1JIP8,NCBI_GP:CAL10489.1;Name=CAL10489.1;gbkey=CDS;gene=sugE;product=putative chaperone;protein_id=CAL10489.1;transl_table=11
AM286415.1	EMBL	sequence_feature	425009	425287	.	+	.	ID=id724;Note=Pfam match to entry PF00893 DUF7%2C Integral membrane protein DUF7%2C score 173.4%2C E-value 2.5e-49;gbkey=misc_feature;gene=sugE;inference=protein motif:PFAM:PF00893
AM286415.1	EMBL	sequence_feature	425012	425065	.	+	.	ID=id725;Note=4 probable transmembrane helices predicted for YE0359 by TMHMM2.0 at aa 2-19%2C 29-48%2C 55-77 and 82-100;gbkey=misc_feature;gene=sugE;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	425093	425152	.	+	.	ID=id725;Note=4 probable transmembrane helices predicted for YE0359 by TMHMM2.0 at aa 2-19%2C 29-48%2C 55-77 and 82-100;gbkey=misc_feature;gene=sugE;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	425171	425239	.	+	.	ID=id725;Note=4 probable transmembrane helices predicted for YE0359 by TMHMM2.0 at aa 2-19%2C 29-48%2C 55-77 and 82-100;gbkey=misc_feature;gene=sugE;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	425252	425308	.	+	.	ID=id725;Note=4 probable transmembrane helices predicted for YE0359 by TMHMM2.0 at aa 2-19%2C 29-48%2C 55-77 and 82-100;gbkey=misc_feature;gene=sugE;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	425325	425864	.	-	.	ID=gene372;Name=YE0360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0360
AM286415.1	EMBL	CDS	425325	425864	.	-	0	ID=cds344;Parent=gene372;Dbxref=EnsemblGenomes-Gn:YE0360,EnsemblGenomes-Tr:CAL10490,GOA:A1JIP9,InterPro:IPR000566,InterPro:IPR002446,InterPro:IPR011038,InterPro:IPR012674,InterPro:IPR022271,InterPro:IPR022272,UniProtKB/TrEMBL:A1JIP9,NCBI_GP:CAL10490.1;Name=CAL10490.1;Note=Similar to many lipoproteins including: Escherichia coli%2C and Escherichia coli O157:H7 outer membrane lipoprotein Blc precursor or b4149 or z5756 or ecs5130 SWALL:BLC_ECOLI (SWALL:P39281) (177 aa) fasta scores: E(): 6.4e-44%2C 61.49 38d in 174 aa and to Salmonella typhi putative lipoprotein Blc or sty4699 SWALL:Q8Z199 (EMBL:AL627283) (177 aa) fasta scores: E(): 5.8e-46%2C63.79 38d in 174 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P39281;product=lipoprotein;protein_id=CAL10490.1;transl_table=11
AM286415.1	EMBL	sequence_feature	425808	425840	.	-	.	ID=id726;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	426013	426369	.	-	.	ID=gene373;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;gene_synonym=b4151;locus_tag=YE0361
AM286415.1	EMBL	CDS	426013	426369	.	-	0	ID=cds345;Parent=gene373;Dbxref=EnsemblGenomes-Gn:YE0361,EnsemblGenomes-Tr:CAL10491,GOA:A1JIQ0,InterPro:IPR003418,UniProtKB/TrEMBL:A1JIQ0,NCBI_GP:CAL10491.1;Name=CAL10491.1;gbkey=CDS;gene=frdD;product=fumarate reductase hydrophobic protein;protein_id=CAL10491.1;transl_table=11
AM286415.1	EMBL	sequence_feature	426019	426369	.	-	.	ID=id727;Note=Pfam match to entry PF02313 Fumarate_red_D%2CFumarate reductase subunit D%2C score 279.8%2C E-value 2.3e-81;gbkey=misc_feature;gene=frdD;inference=protein motif:PFAM:PF02313
AM286415.1	EMBL	sequence_feature	426265	426333	.	-	.	ID=id728;Note=3 probable transmembrane helices predicted for YE0361 by TMHMM2.0 at aa 13-35%2C 55-77 and 98-117;gbkey=misc_feature;gene=frdD;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	426139	426207	.	-	.	ID=id728;Note=3 probable transmembrane helices predicted for YE0361 by TMHMM2.0 at aa 13-35%2C 55-77 and 98-117;gbkey=misc_feature;gene=frdD;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	426019	426078	.	-	.	ID=id728;Note=3 probable transmembrane helices predicted for YE0361 by TMHMM2.0 at aa 13-35%2C 55-77 and 98-117;gbkey=misc_feature;gene=frdD;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	426386	426778	.	-	.	ID=gene374;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;gene_synonym=b4152;locus_tag=YE0362
AM286415.1	EMBL	CDS	426386	426778	.	-	0	ID=cds346;Parent=gene374;Dbxref=EnsemblGenomes-Gn:YE0362,EnsemblGenomes-Tr:CAL10492,GOA:A1JIQ1,InterPro:IPR003510,NCBI_GP:CAL10492.1;Name=CAL10492.1;gbkey=CDS;gene=frdC;product=fumarate reductase hydrophobic protein;protein_id=CAL10492.1;transl_table=11
AM286415.1	EMBL	sequence_feature	426389	426775	.	-	.	ID=id729;Note=Pfam match to entry PF02300 Fumarate_red_C%2CFumarate reductase subunit C%2C score 286.8%2C E-value 1.8e-83;gbkey=misc_feature;gene=frdC;inference=protein motif:PFAM:PF02300
AM286415.1	EMBL	sequence_feature	426629	426688	.	-	.	ID=id730;Note=3 probable transmembrane helices predicted for YE0362 by TMHMM2.0 at aa 31-50%2C 60-82 and 112-129;gbkey=misc_feature;gene=frdC;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	426533	426601	.	-	.	ID=id730;Note=3 probable transmembrane helices predicted for YE0362 by TMHMM2.0 at aa 31-50%2C 60-82 and 112-129;gbkey=misc_feature;gene=frdC;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	426392	426445	.	-	.	ID=id730;Note=3 probable transmembrane helices predicted for YE0362 by TMHMM2.0 at aa 31-50%2C 60-82 and 112-129;gbkey=misc_feature;gene=frdC;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	426795	427529	.	-	.	ID=gene375;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;gene_synonym=b4153;locus_tag=YE0363
AM286415.1	EMBL	CDS	426795	427529	.	-	0	ID=cds347;Parent=gene375;Dbxref=EnsemblGenomes-Gn:YE0363,EnsemblGenomes-Tr:CAL10493,GOA:A1JIQ2,InterPro:IPR001041,InterPro:IPR004489,InterPro:IPR006058,InterPro:IPR009051,InterPro:IPR012675,InterPro:IPR017896,InterPro:IPR017900,InterPro:IPR025192,UniProtKB/TrEMBL:A1JIQ2,NCBI_GP:CAL10493.1;Name=CAL10493.1;gbkey=CDS;gene=frdB;product=fumarate reductase iron-sulfur protein;protein_id=CAL10493.1;transl_table=11
AM286415.1	EMBL	sequence_feature	427035	427106	.	-	.	ID=id731;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 16.6%2C E-value 0.00044;gbkey=misc_feature;gene=frdB;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	427050	427085	.	-	.	ID=id732;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=frdB;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	427278	427472	.	-	.	ID=id733;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domain%2C score 15.7%2C E-value 0.00081;gbkey=misc_feature;gene=frdB;inference=protein motif:PFAM:PF00111
AM286415.1	EMBL	sequence_feature	427332	427358	.	-	.	ID=id734;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=frdB;inference=protein motif:Prosite:PS00197
AM286415.1	EMBL	gene	427522	429345	.	-	.	ID=gene376;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;gene_synonym=b4154;locus_tag=YE0364
AM286415.1	EMBL	CDS	427522	429345	.	-	0	ID=cds348;Parent=gene376;Dbxref=EnsemblGenomes-Gn:YE0364,EnsemblGenomes-Tr:CAL10494,GOA:A1JIQ3,InterPro:IPR003952,InterPro:IPR003953,InterPro:IPR005884,InterPro:IPR013027,InterPro:IPR014006,InterPro:IPR015939,InterPro:IPR027477,UniProtKB/TrEMBL:A1JIQ3,NCBI_GP:CAL10494.1;Name=CAL10494.1;gbkey=CDS;gene=frdA;product=fumarate reductase flavoprotein subunit;protein_id=CAL10494.1;transl_table=11
AM286415.1	EMBL	sequence_feature	427603	427989	.	-	.	ID=id735;Note=Pfam match to entry PF02910 succ_DH_flav_C%2CFumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain%2C score 236.7%2C E-value 2.1e-68;gbkey=misc_feature;gene=frdA;inference=protein motif:PFAM:PF02910
AM286415.1	EMBL	sequence_feature	428047	429030	.	-	.	ID=id736;Note=Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain%2C score 675.6%2C E-value 1.7e-200;gbkey=misc_feature;gene=frdA;inference=protein motif:PFAM:PF00890
AM286415.1	EMBL	sequence_feature	429190	429219	.	-	.	ID=id737;Note=PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site.;gbkey=misc_feature;gene=frdA;inference=protein motif:Prosite:PS00504
AM286415.1	EMBL	gene	429789	430766	.	+	.	ID=gene377;Name=poxA;gbkey=Gene;gene=poxA;gene_biotype=protein_coding;gene_synonym=b4155,genX;locus_tag=YE0365
AM286415.1	EMBL	CDS	429789	430766	.	+	0	ID=cds349;Parent=gene377;Dbxref=EnsemblGenomes-Gn:YE0365,EnsemblGenomes-Tr:CAL10495,GOA:A1JIQ4,InterPro:IPR004364,InterPro:IPR004525,InterPro:IPR006195,InterPro:IPR018149,InterPro:IPR018150,NCBI_GP:CAL10495.1;Name=CAL10495.1;gbkey=CDS;gene=poxA;product=putative lysyl-tRNA synthetase;protein_id=CAL10495.1;transl_table=11
AM286415.1	EMBL	sequence_feature	429789	430763	.	+	.	ID=id738;Note=Pfam match to entry PF00152 tRNA-synt_2%2C tRNA synthetases class II (D%2C K and N)%2C score 449.3%2C E-value 2.2e-132;gbkey=misc_feature;gene=poxA;inference=protein motif:PFAM:PF00152
AM286415.1	EMBL	sequence_feature	430083	430136	.	+	.	ID=id739;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;gbkey=misc_feature;gene=poxA;inference=protein motif:Prosite:PS00179
AM286415.1	EMBL	sequence_feature	430680	430709	.	+	.	ID=id740;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=poxA;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	430861	434091	.	-	.	ID=gene378;Name=YE0366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0366
AM286415.1	EMBL	CDS	430861	434091	.	-	0	ID=cds350;Parent=gene378;Dbxref=EnsemblGenomes-Gn:YE0366,EnsemblGenomes-Tr:CAL10496,GOA:A1JIQ5,InterPro:IPR006685,InterPro:IPR006686,InterPro:IPR010920,InterPro:IPR011014,InterPro:IPR011066,InterPro:IPR024393,InterPro:IPR025692,UniProtKB/TrEMBL:A1JIQ5,NCBI_GP:CAL10496.1;Name=CAL10496.1;gbkey=CDS;product=putative membrane transport protein;protein_id=CAL10496.1;transl_table=11
AM286415.1	EMBL	sequence_feature	430948	431553	.	-	.	ID=id741;Note=Pfam match to entry PF00924 MS_channel%2CMechanosensitive ion channel%2C score 259.4%2C E-value 3.3e-75;gbkey=misc_feature;inference=protein motif:PFAM:PF00924
AM286415.1	EMBL	sequence_feature	431230	431334	.	-	.	ID=id742;Note=PS01246 Uncharacterized protein family UPF0003 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01246
AM286415.1	EMBL	sequence_feature	432697	432750	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	432541	432609	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	432445	432513	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	432325	432384	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	432229	432297	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	432100	432168	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	432019	432087	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	431755	431823	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	431629	431697	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	431479	431538	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	431383	431451	.	-	.	ID=id743;Note=11 probable transmembrane helices predicted for YE0366 by TMHMM2.0 at aa 448-465%2C 495-517%2C 527-549%2C570-589%2C 599-621%2C 642-664%2C 669-691%2C 757-779%2C 799-821%2C852-871 and 881-903;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	434261	435142	.	-	.	ID=gene379;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=YE0367
AM286415.1	EMBL	CDS	434261	435142	.	-	0	ID=cds351;Parent=gene379;Dbxref=EnsemblGenomes-Gn:YE0367,EnsemblGenomes-Tr:CAL10497,GOA:A1JIQ6,InterPro:IPR003817,NCBI_GP:CAL10497.1;Name=CAL10497.1;gbkey=CDS;gene=psd;product=phosphatidylserine decarboxylase proenzyme;protein_id=CAL10497.1;transl_table=11
AM286415.1	EMBL	sequence_feature	434288	434956	.	-	.	ID=id744;Note=Pfam match to entry PF02666 PS_Dcarbxylase%2CPhosphatidylserine decarboxylase%2C score 343.4%2C E-value 1.6e-100;gbkey=misc_feature;gene=psd;inference=protein motif:PFAM:PF02666
AM286415.1	EMBL	gene	435251	436303	.	-	.	ID=gene380;Name=YE0368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0368
AM286415.1	EMBL	CDS	435251	436303	.	-	0	ID=cds352;Parent=gene380;Dbxref=EnsemblGenomes-Gn:YE0368,EnsemblGenomes-Tr:CAL10498,GOA:A1JIQ7,InterPro:IPR004881,InterPro:IPR010914,InterPro:IPR027417,NCBI_GP:CAL10498.1;Name=CAL10498.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10498.1;transl_table=11
AM286415.1	EMBL	sequence_feature	435302	435769	.	-	.	ID=id745;Note=Pfam match to entry PF03193 DUF258%2C Protein of unknown function%2C DUF258%2C score 285.2%2C E-value 5.3e-83;gbkey=misc_feature;inference=protein motif:PFAM:PF03193
AM286415.1	EMBL	sequence_feature	435644	435667	.	-	.	ID=id746;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	436481	437026	.	+	.	ID=gene381;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;gene_synonym=b4162;locus_tag=YE0369
AM286415.1	EMBL	CDS	436481	437026	.	+	0	ID=cds353;Parent=gene381;Dbxref=EnsemblGenomes-Gn:YE0369,EnsemblGenomes-Tr:CAL10499,GOA:A1JIQ8,InterPro:IPR006055,InterPro:IPR012337,InterPro:IPR013520,InterPro:IPR022894,NCBI_GP:CAL10499.1;Name=CAL10499.1;gbkey=CDS;gene=orn;product=oligoribonuclease;protein_id=CAL10499.1;transl_table=11
AM286415.1	EMBL	sequence_feature	436502	437017	.	+	.	ID=id747;Note=Pfam match to entry PF00929 Exonuclease%2CExonuclease%2C score 130.2%2C E-value 2.5e-36;gbkey=misc_feature;gene=orn;inference=protein motif:PFAM:PF00929
AM286415.1	EMBL	gene	437336	437411	.	+	.	ID=gene382;Name=tRNA-Gly (GCC);gbkey=Gene;gene=tRNA-Gly (GCC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	437336	437411	.	+	.	ID=rna33;Parent=gene382;gbkey=tRNA;gene=tRNA-Gly (GCC);product=tRNA-Gly
AM286415.1	EMBL	exon	437336	437411	.	+	.	ID=id748;Parent=rna33;gbkey=tRNA;gene=tRNA-Gly (GCC);product=tRNA-Gly
AM286415.1	EMBL	gene	437503	437578	.	+	.	ID=gene383;Name=tRNA-Gly (GCC);gbkey=Gene;gene=tRNA-Gly (GCC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	437503	437578	.	+	.	ID=rna34;Parent=gene383;gbkey=tRNA;gene=tRNA-Gly (GCC);product=tRNA-Gly
AM286415.1	EMBL	exon	437503	437578	.	+	.	ID=id749;Parent=rna34;gbkey=tRNA;gene=tRNA-Gly (GCC);product=tRNA-Gly
AM286415.1	EMBL	gene	437653	437728	.	+	.	ID=gene384;Name=tRNA-Gly (GCC);gbkey=Gene;gene=tRNA-Gly (GCC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	437653	437728	.	+	.	ID=rna35;Parent=gene384;gbkey=tRNA;gene=tRNA-Gly (GCC);product=tRNA-Gly
AM286415.1	EMBL	exon	437653	437728	.	+	.	ID=id750;Parent=rna35;gbkey=tRNA;gene=tRNA-Gly (GCC);product=tRNA-Gly
AM286415.1	EMBL	gene	438071	439225	.	-	.	ID=gene385;Name=YE0371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0371
AM286415.1	EMBL	CDS	438071	439225	.	-	0	ID=cds354;Parent=gene385;Dbxref=EnsemblGenomes-Gn:YE0371,EnsemblGenomes-Tr:CAL10500,GOA:A1JIQ9,InterPro:IPR004453,InterPro:IPR009051,InterPro:IPR013542,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JIQ9,NCBI_GP:CAL10500.1;Name=CAL10500.1;gbkey=CDS;product=putative iron-sulfur cluster-binding protein;protein_id=CAL10500.1;transl_table=11
AM286415.1	EMBL	sequence_feature	438584	438655	.	-	.	ID=id751;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 15.8%2C E-value 0.00059;gbkey=misc_feature;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	438599	438634	.	-	.	ID=id752;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	439224	440738	.	+	.	ID=gene386;Name=YE0372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0372
AM286415.1	EMBL	CDS	439224	440738	.	+	0	ID=cds355;Parent=gene386;Dbxref=EnsemblGenomes-Gn:YE0372,EnsemblGenomes-Tr:CAL10501,InterPro:IPR000631,InterPro:IPR004443,InterPro:IPR029056,UniProtKB/TrEMBL:A1JIR0,NCBI_GP:CAL10501.1;Name=CAL10501.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10501.1;transl_table=11
AM286415.1	EMBL	sequence_feature	439323	439820	.	+	.	ID=id753;Note=Pfam match to entry PF03853 YjeF_N%2C YjeF-related protein N-terminus%2C score 199.2%2C E-value 4.3e-57;gbkey=misc_feature;inference=protein motif:PFAM:PF03853
AM286415.1	EMBL	sequence_feature	439476	439508	.	+	.	ID=id754;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	439992	440711	.	+	.	ID=id755;Note=Pfam match to entry PF01256 UPF0031%2CUncharacterized protein family UPF0031%2C score 311.7%2CE-value 5.8e-91;gbkey=misc_feature;inference=protein motif:PFAM:PF01256
AM286415.1	EMBL	gene	440749	441219	.	+	.	ID=gene387;Name=YE0373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0373
AM286415.1	EMBL	CDS	440749	441219	.	+	0	ID=cds356;Parent=gene387;Dbxref=EnsemblGenomes-Gn:YE0373,EnsemblGenomes-Tr:CAL10502,GOA:A1JIR1,InterPro:IPR003442,InterPro:IPR027417,UniProtKB/TrEMBL:A1JIR1,NCBI_GP:CAL10502.1;Name=CAL10502.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10502.1;transl_table=11
AM286415.1	EMBL	sequence_feature	440788	441156	.	+	.	ID=id756;Note=Pfam match to entry PF02367 UPF0079%2CUncharacterised P-loop hydrolase UPF0079%2C score 197.6%2CE-value 1.3e-56;gbkey=misc_feature;inference=protein motif:PFAM:PF02367
AM286415.1	EMBL	sequence_feature	440851	440874	.	+	.	ID=id757;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	441320	443182	.	+	.	ID=gene388;Name=YE0374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0374
AM286415.1	EMBL	CDS	441320	443182	.	+	0	ID=cds357;Parent=gene388;Dbxref=EnsemblGenomes-Gn:YE0374,EnsemblGenomes-Tr:CAL10503,GOA:A1JIR2,InterPro:IPR002508,InterPro:IPR018392,InterPro:IPR021731,UniProtKB/TrEMBL:A1JIR2,NCBI_GP:CAL10503.1;Name=CAL10503.1;gbkey=CDS;product=putative N-acetylmuramoyl-L-alanine amidase-family protein;protein_id=CAL10503.1;transl_table=11
AM286415.1	EMBL	sequence_feature	442157	442648	.	+	.	ID=id758;Note=Pfam match to entry PF01520 Amidase_3%2CN-acetylmuramoyl-L-alanine amidase%2C score 256.6%2C E-value 2.2e-74;gbkey=misc_feature;inference=protein motif:PFAM:PF01520
AM286415.1	EMBL	sequence_feature	442838	442966	.	+	.	ID=id759;Note=Pfam match to entry PF01476 LysM%2C LysM domain %2Cscore 54.6%2C E-value 1.5e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF01476
AM286415.1	EMBL	sequence_feature	443045	443173	.	+	.	ID=id760;Note=Pfam match to entry PF01476 LysM%2C LysM domain %2Cscore 71.0%2C E-value 1.6e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF01476
AM286415.1	EMBL	sequence_feature	443063	443128	.	+	.	ID=id761;Note=Predicted helix-turn-helix motif with score 1170.000%2C SD 3.17 at aa 582-603%2C sequence DTLSAIAARYGVSMSEIERANK;gbkey=misc_feature
AM286415.1	EMBL	gene	443198	445105	.	+	.	ID=gene389;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;gene_synonym=b4170;locus_tag=YE0375
AM286415.1	EMBL	CDS	443198	445105	.	+	0	ID=cds358;Parent=gene389;Dbxref=EnsemblGenomes-Gn:YE0375,EnsemblGenomes-Tr:CAL10504,GOA:A1JIR3,InterPro:IPR002099,InterPro:IPR003594,InterPro:IPR011186,InterPro:IPR013507,InterPro:IPR014721,InterPro:IPR014762,InterPro:IPR014790,InterPro:IPR020568,InterPro:IPR020667,NCBI_GP:CAL10504.1;Name=CAL10504.1;gbkey=CDS;gene=mutL;product=DNA mismatch repair protein;protein_id=CAL10504.1;transl_table=11
AM286415.1	EMBL	sequence_feature	443249	443542	.	+	.	ID=id762;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 38.8%2C E-value 8.2e-09;gbkey=misc_feature;gene=mutL;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	443474	443494	.	+	.	ID=id763;Note=PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature.;gbkey=misc_feature;gene=mutL;inference=protein motif:Prosite:PS00058
AM286415.1	EMBL	sequence_feature	443846	444187	.	+	.	ID=id764;Note=Pfam match to entry PF01119 DNA_mis_repair%2C DNA mismatch repair protein%2C C-terminal domain%2C score 149.4%2CE-value 4e-42;gbkey=misc_feature;gene=mutL;inference=protein motif:PFAM:PF01119
AM286415.1	EMBL	gene	445098	446039	.	+	.	ID=gene390;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;gene_synonym=b4171,trpX;locus_tag=YE0376
AM286415.1	EMBL	CDS	445098	446039	.	+	0	ID=cds359;Parent=gene390;Dbxref=EnsemblGenomes-Gn:YE0376,EnsemblGenomes-Tr:CAL10505,GOA:A1JIR4,InterPro:IPR002627,InterPro:IPR018022,InterPro:IPR027417,NCBI_GP:CAL10505.1;Name=CAL10505.1;gbkey=CDS;gene=miaA;product=tRNA delta(2)-isopentenylpyrophosphate transferase;protein_id=CAL10505.1;transl_table=11
AM286415.1	EMBL	sequence_feature	445146	445169	.	+	.	ID=id765;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=miaA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	445227	445991	.	+	.	ID=id766;Note=Pfam match to entry PF01715 IPPT%2C IPP transferase %2Cscore 529.6%2C E-value 1.4e-156;gbkey=misc_feature;gene=miaA;inference=protein motif:PFAM:PF01715
AM286415.1	EMBL	gene	446155	446460	.	+	.	ID=gene391;Name=ymr;gbkey=Gene;gene=ymr;gene_biotype=protein_coding;locus_tag=YE0377
AM286415.1	EMBL	CDS	446155	446460	.	+	0	ID=cds360;Parent=gene391;Dbxref=EnsemblGenomes-Gn:YE0377,EnsemblGenomes-Tr:CAL10506,GOA:A1JIR5,InterPro:IPR001163,InterPro:IPR005001,InterPro:IPR010920,NCBI_GP:CAL10506.1;Name=CAL10506.1;gbkey=CDS;gene=ymr;product=yersinia multiple regulator;protein_id=CAL10506.1;transl_table=11
AM286415.1	EMBL	sequence_feature	446167	446346	.	+	.	ID=id767;Note=Pfam match to entry PF03329 Hfq%2C Host factor Hfq %2Cscore 153.0%2C E-value 3.5e-43;gbkey=misc_feature;gene=ymr;inference=protein motif:PFAM:PF03329
AM286415.1	EMBL	gene	446559	447860	.	+	.	ID=gene392;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=YE0378
AM286415.1	EMBL	CDS	446559	447860	.	+	0	ID=cds361;Parent=gene392;Dbxref=EnsemblGenomes-Gn:YE0378,EnsemblGenomes-Tr:CAL10507,GOA:A1JIR6,InterPro:IPR006073,InterPro:IPR009022,InterPro:IPR016496,InterPro:IPR025121,InterPro:IPR027417,UniProtKB/TrEMBL:A1JIR6,NCBI_GP:CAL10507.1;Name=CAL10507.1;gbkey=CDS;gene=hflX;product=GTP-binding protein;protein_id=CAL10507.1;transl_table=11
AM286415.1	EMBL	sequence_feature	447168	447191	.	+	.	ID=id768;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=hflX;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	448234	449241	.	+	.	ID=gene393;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;gene_synonym=hflA;locus_tag=YE0379
AM286415.1	EMBL	CDS	448234	449241	.	+	0	ID=cds362;Parent=gene393;Dbxref=EnsemblGenomes-Gn:YE0379,EnsemblGenomes-Tr:CAL10508,GOA:A1JIR7,InterPro:IPR001107,InterPro:IPR001972,InterPro:IPR010201,UniProtKB/TrEMBL:A1JIR7,NCBI_GP:CAL10508.1;Name=CAL10508.1;gbkey=CDS;gene=hflK;product=putative membrane protein;protein_id=CAL10508.1;transl_table=11
AM286415.1	EMBL	sequence_feature	448255	448779	.	+	.	ID=id769;Note=Pfam match to entry PF01145 Band_7%2C SPFH domain / Band 7 family%2C score 181.4%2C E-value 9.4e-52;gbkey=misc_feature;gene=hflK;inference=protein motif:PFAM:PF01145
AM286415.1	EMBL	gene	449245	450249	.	+	.	ID=gene394;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;gene_synonym=hflA;locus_tag=YE0380
AM286415.1	EMBL	CDS	449245	450249	.	+	0	ID=cds363;Parent=gene394;Dbxref=EnsemblGenomes-Gn:YE0380,EnsemblGenomes-Tr:CAL10509,GOA:A1JIR8,InterPro:IPR001107,InterPro:IPR001972,InterPro:IPR010200,UniProtKB/TrEMBL:A1JIR8,NCBI_GP:CAL10509.1;Name=CAL10509.1;gbkey=CDS;gene=hflC;product=putative membrane protein;protein_id=CAL10509.1;transl_table=11
AM286415.1	EMBL	sequence_feature	449257	449316	.	+	.	ID=id770;Note=1 probable transmembrane helix predicted for YE0380 by TMHMM2.0 at aa 5-24;gbkey=misc_feature;gene=hflC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	449299	449970	.	+	.	ID=id771;Note=Pfam match to entry PF01145 Band_7%2C SPFH domain / Band 7 family%2C score 202.0%2C E-value 5.9e-58;gbkey=misc_feature;gene=hflC;inference=protein motif:PFAM:PF01145
AM286415.1	EMBL	gene	450388	450588	.	+	.	ID=gene395;Name=YE0381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0381
AM286415.1	EMBL	CDS	450388	450588	.	+	0	ID=cds364;Parent=gene395;Dbxref=EnsemblGenomes-Gn:YE0381,EnsemblGenomes-Tr:CAL10510,InterPro:IPR019201,UniProtKB/TrEMBL:A1JIR9,NCBI_GP:CAL10510.1;Name=CAL10510.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10510.1;transl_table=11
AM286415.1	EMBL	sequence_feature	450400	450468	.	+	.	ID=id772;Note=2 probable transmembrane helices predicted for YE0381 by TMHMM2.0 at aa 5-27 and 42-60;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	450511	450567	.	+	.	ID=id772;Note=2 probable transmembrane helices predicted for YE0381 by TMHMM2.0 at aa 5-27 and 42-60;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	450688	451986	.	+	.	ID=gene396;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;gene_synonym=adeK;locus_tag=YE0382
AM286415.1	EMBL	CDS	450688	451986	.	+	0	ID=cds365;Parent=gene396;Dbxref=EnsemblGenomes-Gn:YE0382,EnsemblGenomes-Tr:CAL10511,GOA:A1JIS0,InterPro:IPR001114,InterPro:IPR018220,InterPro:IPR027417,NCBI_GP:CAL10511.1;Name=CAL10511.1;gbkey=CDS;gene=purA;product=adenylosuccinate synthetase;protein_id=CAL10511.1;transl_table=11
AM286415.1	EMBL	sequence_feature	450694	451962	.	+	.	ID=id773;Note=Pfam match to entry PF00709 Adenylsucc_synt%2CAdenylosuccinate synthetase%2C score 1038.5%2C E-value 0;gbkey=misc_feature;gene=purA;inference=protein motif:PFAM:PF00709
AM286415.1	EMBL	sequence_feature	450718	450741	.	+	.	ID=id774;Note=PS01266 Adenylosuccinate synthetase GTP-binding site.;gbkey=misc_feature;gene=purA;inference=protein motif:Prosite:PS01266
AM286415.1	EMBL	sequence_feature	451084	451119	.	+	.	ID=id775;Note=PS00513 Adenylosuccinate synthetase active site.;gbkey=misc_feature;gene=purA;inference=protein motif:Prosite:PS00513
AM286415.1	EMBL	gene	452266	452691	.	+	.	ID=gene397;Name=YE0383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0383
AM286415.1	EMBL	CDS	452266	452691	.	+	0	ID=cds366;Parent=gene397;Dbxref=EnsemblGenomes-Gn:YE0383,EnsemblGenomes-Tr:CAL10512,GOA:A1JIS1,InterPro:IPR000944,InterPro:IPR011991,InterPro:IPR023761,NCBI_GP:CAL10512.1;Name=CAL10512.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10512.1;transl_table=11
AM286415.1	EMBL	sequence_feature	452266	452622	.	+	.	ID=id776;Note=Pfam match to entry PF02082 UPF0074%2CUncharacterized protein family UPF0074%2C score 201.5%2CE-value 8.6e-58;gbkey=misc_feature;inference=protein motif:PFAM:PF02082
AM286415.1	EMBL	sequence_feature	452341	452406	.	+	.	ID=id777;Note=Predicted helix-turn-helix motif with score 1116.000%2C SD 2.99 at aa 26-47%2C sequence TSISQVTEVYGVSRNHMVKIIN;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	452410	452466	.	+	.	ID=id778;Note=PS01332 Uncharacterized protein family UPF0074 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01332
AM286415.1	EMBL	gene	452871	455417	.	+	.	ID=gene398;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;gene_synonym=vacB;locus_tag=YE0384
AM286415.1	EMBL	CDS	452871	455417	.	+	0	ID=cds367;Parent=gene398;Dbxref=EnsemblGenomes-Gn:YE0384,EnsemblGenomes-Tr:CAL10513,GOA:A1JIS2,InterPro:IPR003029,InterPro:IPR004476,InterPro:IPR011129,InterPro:IPR011805,InterPro:IPR012340,InterPro:IPR013223,InterPro:IPR013668,InterPro:IPR022967,UniProtKB/TrEMBL:A1JIS2,NCBI_GP:CAL10513.1;Name=CAL10513.1;gbkey=CDS;gene=rnr;product=ribonuclease R;protein_id=CAL10513.1;transl_table=11
AM286415.1	EMBL	sequence_feature	453414	454520	.	+	.	ID=id779;Note=Pfam match to entry PF00773 RNB%2C RNB-like protein %2Cscore 474.4%2C E-value 6.2e-140;gbkey=misc_feature;gene=rnr;inference=protein motif:PFAM:PF00773
AM286415.1	EMBL	sequence_feature	454791	455048	.	+	.	ID=id780;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 68.4%2C E-value 9.5e-18;gbkey=misc_feature;gene=rnr;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	gene	455489	456229	.	+	.	ID=gene399;Name=YE0385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0385
AM286415.1	EMBL	CDS	455489	456229	.	+	0	ID=cds368;Parent=gene399;Dbxref=EnsemblGenomes-Gn:YE0385,EnsemblGenomes-Tr:CAL10514,GOA:A1JIS3,InterPro:IPR001537,InterPro:IPR004441,InterPro:IPR013123,InterPro:IPR024915,InterPro:IPR029026,InterPro:IPR029028,InterPro:IPR029064,UniProtKB/TrEMBL:A1JIS3,NCBI_GP:CAL10514.1;Name=CAL10514.1;gbkey=CDS;product=putative methylase;protein_id=CAL10514.1;transl_table=11
AM286415.1	EMBL	sequence_feature	455771	456196	.	+	.	ID=id781;Note=Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family%2C score 215.8%2C E-value 4.3e-62;gbkey=misc_feature;inference=protein motif:PFAM:PF00588
AM286415.1	EMBL	gene	456561	458204	.	+	.	ID=gene400;Name=aidB;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=YE0386
AM286415.1	EMBL	CDS	456561	458204	.	+	0	ID=cds369;Parent=gene400;Dbxref=EnsemblGenomes-Gn:YE0386,EnsemblGenomes-Tr:CAL10515,GOA:A1JIS4,InterPro:IPR006089,InterPro:IPR006091,InterPro:IPR009075,InterPro:IPR009100,UniProtKB/TrEMBL:A1JIS4,NCBI_GP:CAL10515.1;Name=CAL10515.1;gbkey=CDS;gene=aidB;product=putative acyl-CoA dehydrogenase;protein_id=CAL10515.1;transl_table=11
AM286415.1	EMBL	sequence_feature	456720	457115	.	+	.	ID=id782;Note=Pfam match to entry PF02771 Acyl-CoA_dh_N%2C Acyl-CoA dehydrogenase%2C N-terminal domain%2C score 120.8%2C E-value 1.7e-33;gbkey=misc_feature;gene=aidB;inference=protein motif:PFAM:PF02771
AM286415.1	EMBL	sequence_feature	457119	457427	.	+	.	ID=id783;Note=Pfam match to entry PF02770 Acyl-CoA_dh_M%2C Acyl-CoA dehydrogenase%2C middle domain%2C score 105.7%2C E-value 6e-29;gbkey=misc_feature;gene=aidB;inference=protein motif:PFAM:PF02770
AM286415.1	EMBL	sequence_feature	457119	457157	.	+	.	ID=id784;Note=PS00072 Acyl-CoA dehydrogenases signature 1.;gbkey=misc_feature;gene=aidB;inference=protein motif:Prosite:PS00072
AM286415.1	EMBL	sequence_feature	457437	457904	.	+	.	ID=id785;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C C-terminal domain%2C score 139.9%2C E-value 3e-39;gbkey=misc_feature;gene=aidB;inference=protein motif:PFAM:PF00441
AM286415.1	EMBL	gene	458229	458537	.	-	.	ID=gene401;Name=YE0387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0387
AM286415.1	EMBL	CDS	458229	458537	.	-	0	ID=cds370;Parent=gene401;Dbxref=EnsemblGenomes-Gn:YE0387,EnsemblGenomes-Tr:CAL10516,InterPro:IPR010854,InterPro:IPR025543,UniProtKB/TrEMBL:A1JIS5,NCBI_GP:CAL10516.1;Name=CAL10516.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL10516.1;transl_table=11
AM286415.1	EMBL	sequence_feature	458460	458519	.	-	.	ID=id786;Note=2 probable transmembrane helices predicted for YE0387 by TMHMM2.0 at aa 7-26 and 79-101;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	458235	458303	.	-	.	ID=id786;Note=2 probable transmembrane helices predicted for YE0387 by TMHMM2.0 at aa 7-26 and 79-101;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	458481	458513	.	-	.	ID=id787;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	458723	459472	.	+	.	ID=gene402;Name=YE0388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0388
AM286415.1	EMBL	CDS	458723	459472	.	+	0	ID=cds371;Parent=gene402;Dbxref=EnsemblGenomes-Gn:YE0388,EnsemblGenomes-Tr:CAL10517,InterPro:IPR029058,InterPro:IPR029059,UniProtKB/TrEMBL:A1JIS6,NCBI_GP:CAL10517.1;Name=CAL10517.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10517.1;transl_table=11
AM286415.1	EMBL	gene	459557	459844	.	-	.	ID=gene403;Name=YE0389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0389
AM286415.1	EMBL	CDS	459557	459844	.	-	0	ID=cds372;Parent=gene403;Dbxref=EnsemblGenomes-Gn:YE0389,EnsemblGenomes-Tr:CAL10518,InterPro:IPR010854,InterPro:IPR025543,UniProtKB/TrEMBL:A1JIS7,NCBI_GP:CAL10518.1;Name=CAL10518.1;Note=Similar to many exported proteins including: Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YjfY precursor b4199 or z5808 or ecs5175 SWALL:YJFY_ECOLI (SWALL:P39307) (91 aa) fasta scores: E(): 1.4e-06%2C 40 38d in 80 aa and to Salmonella typhimurium putative outer membrane protein YhcN or Stm3361 SWALL:Q8ZLP6 (EMBL:AE008855) (87 aa) fasta scores: E(): 2.8e-05%2C 43.95 38d in 91 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P39307;product=putative exported protein;protein_id=CAL10518.1;transl_table=11
AM286415.1	EMBL	gene	460435	460827	.	+	.	ID=gene404;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=YE0392
AM286415.1	EMBL	CDS	460435	460827	.	+	0	ID=cds373;Parent=gene404;Dbxref=EnsemblGenomes-Gn:YE0392,EnsemblGenomes-Tr:CAL10519,GOA:A1JIS8,InterPro:IPR000529,InterPro:IPR014717,InterPro:IPR020814,InterPro:IPR020815,NCBI_GP:CAL10519.1;Name=CAL10519.1;gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=CAL10519.1;transl_table=11
AM286415.1	EMBL	sequence_feature	460438	460710	.	+	.	ID=id788;Note=Pfam match to entry PF01250 Ribosomal_S6%2C Ribosomal protein S6%2C score 171.7%2C E-value 8.1e-49;gbkey=misc_feature;gene=rpsF;inference=protein motif:PFAM:PF01250
AM286415.1	EMBL	sequence_feature	460561	460590	.	+	.	ID=id789;Note=PS01048 Ribosomal protein S6 signature.;gbkey=misc_feature;gene=rpsF;inference=protein motif:Prosite:PS01048
AM286415.1	EMBL	gene	460832	461152	.	+	.	ID=gene405;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=YE0393
AM286415.1	EMBL	CDS	460832	461152	.	+	0	ID=cds374;Parent=gene405;Dbxref=EnsemblGenomes-Gn:YE0393,EnsemblGenomes-Tr:CAL10520,GOA:A1JIS9,InterPro:IPR000424,InterPro:IPR012340,InterPro:IPR023646,NCBI_GP:CAL10520.1;Name=CAL10520.1;gbkey=CDS;gene=priB;product=primosomal replication protein n;protein_id=CAL10520.1;transl_table=11
AM286415.1	EMBL	gene	461157	461384	.	+	.	ID=gene406;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=YE0394
AM286415.1	EMBL	CDS	461157	461384	.	+	0	ID=cds375;Parent=gene406;Dbxref=EnsemblGenomes-Gn:YE0394,EnsemblGenomes-Tr:CAL10521,GOA:A1JIT0,InterPro:IPR001648,InterPro:IPR018275,NCBI_GP:CAL10521.1;Name=CAL10521.1;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=CAL10521.1;transl_table=11
AM286415.1	EMBL	sequence_feature	461199	461360	.	+	.	ID=id790;Note=Pfam match to entry PF01084 Ribosomal_S18%2CRibosomal protein S18%2C score 110.3%2C E-value 2.4e-30;gbkey=misc_feature;gene=rpsR;inference=protein motif:PFAM:PF01084
AM286415.1	EMBL	sequence_feature	461217	461288	.	+	.	ID=id791;Note=PS00057 Ribosomal protein S18 signature.;gbkey=misc_feature;gene=rpsR;inference=protein motif:Prosite:PS00057
AM286415.1	EMBL	gene	461424	461876	.	+	.	ID=gene407;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=YE0395
AM286415.1	EMBL	CDS	461424	461876	.	+	0	ID=cds376;Parent=gene407;Dbxref=EnsemblGenomes-Gn:YE0395,EnsemblGenomes-Tr:CAL10522,GOA:A1JIT1,InterPro:IPR000244,InterPro:IPR009027,InterPro:IPR020069,InterPro:IPR020070,InterPro:IPR020594,NCBI_GP:CAL10522.1;Name=CAL10522.1;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=CAL10522.1;transl_table=11
AM286415.1	EMBL	sequence_feature	461424	461579	.	+	.	ID=id792;Note=Pfam match to entry PF01281 Ribosomal_L9_N%2CRibosomal protein L9%2C N-terminal domain%2C score 106.5%2CE-value 3.4e-29;gbkey=misc_feature;gene=rplI;inference=protein motif:PFAM:PF01281
AM286415.1	EMBL	sequence_feature	461460	461543	.	+	.	ID=id793;Note=PS00651 Ribosomal protein L9 signature.;gbkey=misc_feature;gene=rplI;inference=protein motif:Prosite:PS00651
AM286415.1	EMBL	sequence_feature	461607	461870	.	+	.	ID=id794;Note=Pfam match to entry PF03948 Ribosomal_L9_C%2CRibosomal protein L9%2C C-terminal domain%2C score 144.6%2CE-value 1.1e-40;gbkey=misc_feature;gene=rplI;inference=protein motif:PFAM:PF03948
AM286415.1	EMBL	gene	461952	462401	.	-	.	ID=gene408;Name=YE0396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0396
AM286415.1	EMBL	CDS	461952	462401	.	-	0	ID=cds377;Parent=gene408;Dbxref=EnsemblGenomes-Gn:YE0396,EnsemblGenomes-Tr:CAL10523,InterPro:IPR022231,UniProtKB/TrEMBL:A1JIT2,NCBI_GP:CAL10523.1;Name=CAL10523.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10523.1;transl_table=11
AM286415.1	EMBL	gene	462544	463317	.	-	.	ID=gene409;Name=YE0397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0397
AM286415.1	EMBL	CDS	462544	463317	.	-	0	ID=cds378;Parent=gene409;Dbxref=EnsemblGenomes-Gn:YE0397,EnsemblGenomes-Tr:CAL10524,InterPro:IPR007340,InterPro:IPR013731,UniProtKB/TrEMBL:A1JIT3,NCBI_GP:CAL10524.1;Name=CAL10524.1;Note=Similar to Yersinia pestis hypothetical protein Ypo3533 SWALL:Q8ZB86 (EMBL:AJ414157) (246 aa) fasta scores: E(): 2.3e-46%2C 71.76 38d in 255 aa and Escherichia coli hypothetical protein YtfB or b4206 SWALL:YTFB_ECOLI (SWALL:P39310) (212 aa) fasta scores: E(): 7.9e-15%2C 47.39 id in 211 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P39310;product=putative membrane protein;protein_id=CAL10524.1;transl_table=11
AM286415.1	EMBL	sequence_feature	462952	463005	.	-	.	ID=id795;Note=possible transmembrane domain;gbkey=misc_feature
AM286415.1	EMBL	gene	463604	464224	.	+	.	ID=gene410;Name=fklB;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=YE0398
AM286415.1	EMBL	CDS	463604	464224	.	+	0	ID=cds379;Parent=gene410;Dbxref=EnsemblGenomes-Gn:YE0398,EnsemblGenomes-Tr:CAL10525,GOA:A1JIT4,InterPro:IPR000774,InterPro:IPR001179,InterPro:IPR023566,UniProtKB/TrEMBL:A1JIT4,NCBI_GP:CAL10525.1;Name=CAL10525.1;gbkey=CDS;gene=fklB;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=CAL10525.1;transl_table=11
AM286415.1	EMBL	sequence_feature	463838	463861	.	+	.	ID=id796;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=fklB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	463853	463927	.	+	.	ID=id797;Note=Pfam match to entry PF01346 FKBP_N%2C Domain amino terminal to FKBP-type peptidyl-prolyl isomerase%2C score 22.7%2C E-value 1.9e-05;gbkey=misc_feature;gene=fklB;inference=protein motif:PFAM:PF01346
AM286415.1	EMBL	sequence_feature	463937	464212	.	+	.	ID=id798;Note=Pfam match to entry PF00254 FKBP%2C FKBP-type peptidyl-prolyl cis-trans isomerase%2C score 146.4%2C E-value 3.3e-41;gbkey=misc_feature;gene=fklB;inference=protein motif:PFAM:PF00254
AM286415.1	EMBL	sequence_feature	463976	464023	.	+	.	ID=id799;Note=PS00453 FKBP-type peptidyl-prolyl cis-trans isomerase signature 1.;gbkey=misc_feature;gene=fklB;inference=protein motif:Prosite:PS00453
AM286415.1	EMBL	gene	464296	466269	.	-	.	ID=gene411;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=YE0399
AM286415.1	EMBL	CDS	464296	466269	.	-	0	ID=cds380;Parent=gene411;Dbxref=EnsemblGenomes-Gn:YE0399,EnsemblGenomes-Tr:CAL10526,GOA:A1JIT5,InterPro:IPR004843,InterPro:IPR006146,InterPro:IPR006179,InterPro:IPR006294,InterPro:IPR008334,InterPro:IPR029052,UniProtKB/TrEMBL:A1JIT5,NCBI_GP:CAL10526.1;Name=CAL10526.1;gbkey=CDS;gene=cpdB;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase precursor;protein_id=CAL10526.1;transl_table=11
AM286415.1	EMBL	sequence_feature	464575	465180	.	-	.	ID=id800;Note=Pfam match to entry PF02872 5_nucleotidaseC%2C5'-nucleotidase%2C C-terminal domain%2C score 233.1%2C E-value 2.5e-67;gbkey=misc_feature;gene=cpdB;inference=protein motif:PFAM:PF02872
AM286415.1	EMBL	sequence_feature	465460	466173	.	-	.	ID=id801;Note=Pfam match to entry PF00149 Metallophos%2CCalcineurin-like phosphoesterase%2C score 65.4%2C E-value 7.9e-17;gbkey=misc_feature;gene=cpdB;inference=protein motif:PFAM:PF00149
AM286415.1	EMBL	sequence_feature	465883	465918	.	-	.	ID=id802;Note=PS00786 5'-nucleotidase signature 2.;gbkey=misc_feature;gene=cpdB;inference=protein motif:Prosite:PS00786
AM286415.1	EMBL	sequence_feature	466135	466173	.	-	.	ID=id803;Note=PS00785 5'-nucleotidase signature 1.;gbkey=misc_feature;gene=cpdB;inference=protein motif:Prosite:PS00785
AM286415.1	EMBL	gene	466745	467488	.	+	.	ID=gene412;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;gene_synonym=amtA;locus_tag=YE0400
AM286415.1	EMBL	CDS	466745	467488	.	+	0	ID=cds381;Parent=gene412;Dbxref=EnsemblGenomes-Gn:YE0400,EnsemblGenomes-Tr:CAL10527,GOA:A1JIT6,InterPro:IPR000760,InterPro:IPR006240,InterPro:IPR020550,InterPro:IPR020583,UniProtKB/TrEMBL:A1JIT6,NCBI_GP:CAL10527.1;Name=CAL10527.1;gbkey=CDS;gene=cysQ;product=inositol monophosphatase family protein;protein_id=CAL10527.1;transl_table=11
AM286415.1	EMBL	sequence_feature	466745	467482	.	+	.	ID=id804;Note=Pfam match to entry PF00459 inositol_P%2C Inositol monophosphatase family%2C score 225.0%2C E-value 7.1e-65;gbkey=misc_feature;gene=cysQ;inference=protein motif:PFAM:PF00459
AM286415.1	EMBL	sequence_feature	466754	466819	.	+	.	ID=id805;Note=Predicted helix-turn-helix motif with score 1151.000%2C SD 3.11 at aa 4-25%2C sequence EQICQLAREAGVAIMAVYQGEK;gbkey=misc_feature;gene=cysQ
AM286415.1	EMBL	sequence_feature	466985	467026	.	+	.	ID=id806;Note=PS00629 Inositol monophosphatase family signature 1.;gbkey=misc_feature;gene=cysQ;inference=protein motif:Prosite:PS00629
AM286415.1	EMBL	sequence_feature	467357	467401	.	+	.	ID=id807;Note=PS00630 Inositol monophosphatase family signature 2.;gbkey=misc_feature;gene=cysQ;inference=protein motif:Prosite:PS00630
AM286415.1	EMBL	gene	467491	468054	.	-	.	ID=gene413;Name=YE0401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0401
AM286415.1	EMBL	CDS	467491	468054	.	-	0	ID=cds382;Parent=gene413;Dbxref=EnsemblGenomes-Gn:YE0401,EnsemblGenomes-Tr:CAL10528,InterPro:IPR006513,InterPro:IPR012336,UniProtKB/TrEMBL:A1JIT7,NCBI_GP:CAL10528.1;Name=CAL10528.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10528.1;transl_table=11
AM286415.1	EMBL	gene	468378	468581	.	+	.	ID=gene414;Name=YE0402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0402
AM286415.1	EMBL	CDS	468378	468581	.	+	0	ID=cds383;Parent=gene414;Dbxref=EnsemblGenomes-Gn:YE0402,EnsemblGenomes-Tr:CAL10529,InterPro:IPR009491,UniProtKB/TrEMBL:A1JIT8,NCBI_GP:CAL10529.1;Name=CAL10529.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10529.1;transl_table=11
AM286415.1	EMBL	gene	468666	469997	.	-	.	ID=gene415;Name=YE0403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0403
AM286415.1	EMBL	CDS	468666	469997	.	-	0	ID=cds384;Parent=gene415;Dbxref=EnsemblGenomes-Gn:YE0403,EnsemblGenomes-Tr:CAL10530,GOA:A1JIT9,InterPro:IPR000644,InterPro:IPR002550,InterPro:IPR005170,InterPro:IPR016166,InterPro:IPR016169,UniProtKB/TrEMBL:A1JIT9,NCBI_GP:CAL10530.1;Name=CAL10530.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10530.1;transl_table=11
AM286415.1	EMBL	sequence_feature	468720	468962	.	-	.	ID=id808;Note=Pfam match to entry PF03471 CorC_HlyC%2C Transporter associated domain%2C score 101.9%2C E-value 8.4e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF03471
AM286415.1	EMBL	sequence_feature	468999	469160	.	-	.	ID=id809;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 28.1%2C E-value 1.3e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	469188	469352	.	-	.	ID=id810;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 28.9%2C E-value 7.6e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	469407	469994	.	-	.	ID=id811;Note=Pfam match to entry PF01595 DUF21%2C Domain of unknown function DUF21%2C score 238.9%2C E-value 4.8e-69;gbkey=misc_feature;inference=protein motif:PFAM:PF01595
AM286415.1	EMBL	sequence_feature	469917	469985	.	-	.	ID=id812;Note=4 probable transmembrane helices predicted for YE0403 by TMHMM2.0 at aa 5-27%2C 54-76%2C 96-117 and 144-161;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	469770	469838	.	-	.	ID=id812;Note=4 probable transmembrane helices predicted for YE0403 by TMHMM2.0 at aa 5-27%2C 54-76%2C 96-117 and 144-161;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	469647	469712	.	-	.	ID=id812;Note=4 probable transmembrane helices predicted for YE0403 by TMHMM2.0 at aa 5-27%2C 54-76%2C 96-117 and 144-161;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	469515	469568	.	-	.	ID=id812;Note=4 probable transmembrane helices predicted for YE0403 by TMHMM2.0 at aa 5-27%2C 54-76%2C 96-117 and 144-161;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	470285	470923	.	-	.	ID=gene416;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;gene_synonym=pms;locus_tag=YE0404
AM286415.1	EMBL	CDS	470285	470923	.	-	0	ID=cds385;Parent=gene416;Dbxref=EnsemblGenomes-Gn:YE0404,EnsemblGenomes-Tr:CAL10531,GOA:A1JIU0,InterPro:IPR002569,InterPro:IPR028427,NCBI_GP:CAL10531.1;Name=CAL10531.1;gbkey=CDS;gene=msrA;product=peptide methionine sulfoxide reductase;protein_id=CAL10531.1;transl_table=11
AM286415.1	EMBL	sequence_feature	470312	470794	.	-	.	ID=id813;Note=Pfam match to entry PF01625 PMSR%2C Peptide methionine sulfoxide reductase%2C score 315.2%2C E-value 5e-92;gbkey=misc_feature;gene=msrA;inference=protein motif:PFAM:PF01625
AM286415.1	EMBL	gene	471364	473064	.	+	.	ID=gene417;Name=YE0405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0405
AM286415.1	EMBL	CDS	471364	473064	.	+	0	ID=cds386;Parent=gene417;Dbxref=EnsemblGenomes-Gn:YE0405,EnsemblGenomes-Tr:CAL10532,GOA:A1JIU1,InterPro:IPR000184,InterPro:IPR010827,UniProtKB/TrEMBL:A1JIU1,NCBI_GP:CAL10532.1;Name=CAL10532.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10532.1;transl_table=11
AM286415.1	EMBL	sequence_feature	472843	472881	.	+	.	ID=id814;Note=PS00213 Lipocalin signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00213
AM286415.1	EMBL	gene	473166	476945	.	+	.	ID=gene418;Name=YE0406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0406
AM286415.1	EMBL	CDS	473166	476945	.	+	0	ID=cds387;Parent=gene418;Dbxref=EnsemblGenomes-Gn:YE0406,EnsemblGenomes-Tr:CAL10533,InterPro:IPR007452,UniProtKB/TrEMBL:A1JIU2,NCBI_GP:CAL10533.1;Name=CAL10533.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10533.1;transl_table=11
AM286415.1	EMBL	sequence_feature	473169	473237	.	+	.	ID=id815;Note=1 probable transmembrane helix predicted for YE0406 by TMHMM2.0 at aa 2-24;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	476948	477310	.	+	.	ID=gene419;Name=YE0407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0407
AM286415.1	EMBL	CDS	476948	477310	.	+	0	ID=cds388;Parent=gene419;Dbxref=EnsemblGenomes-Gn:YE0407,EnsemblGenomes-Tr:CAL10534,InterPro:IPR009288,InterPro:IPR013024,UniProtKB/TrEMBL:A1JIU3,NCBI_GP:CAL10534.1;Name=CAL10534.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10534.1;transl_table=11
AM286415.1	EMBL	sequence_feature	476975	477283	.	+	.	ID=id816;Note=Pfam match to entry PF03674 UPF0131%2CUncharacterised protein family (UPF0131)%2C score 110.6%2CE-value 2e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF03674
AM286415.1	EMBL	gene	477569	478096	.	-	.	ID=gene420;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=YE0408
AM286415.1	EMBL	CDS	477569	478096	.	-	0	ID=cds389;Parent=gene420;Dbxref=EnsemblGenomes-Gn:YE0408,EnsemblGenomes-Tr:CAL10535,GOA:A1JIU4,InterPro:IPR008162,UniProtKB/TrEMBL:A1JIU4,NCBI_GP:CAL10535.1;Name=CAL10535.1;gbkey=CDS;gene=ppa;product=inorganic pyrophosphatase;protein_id=CAL10535.1;transl_table=11
AM286415.1	EMBL	sequence_feature	477572	478048	.	-	.	ID=id817;Note=Pfam match to entry PF00719 Pyrophosphatase%2CInorganic pyrophosphatase%2C score 211.3%2C E-value 9.2e-61;gbkey=misc_feature;gene=ppa;inference=protein motif:PFAM:PF00719
AM286415.1	EMBL	sequence_feature	477881	477901	.	-	.	ID=id818;Note=PS00387 Inorganic pyrophosphatase signature.;gbkey=misc_feature;gene=ppa;inference=protein motif:Prosite:PS00387
AM286415.1	EMBL	gene	478386	479966	.	+	.	ID=gene421;Name=YE0409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0409
AM286415.1	EMBL	CDS	478386	479966	.	+	0	ID=cds390;Parent=gene421;Dbxref=EnsemblGenomes-Gn:YE0409,EnsemblGenomes-Tr:CAL10536,GOA:A1JIU5,InterPro:IPR000160,InterPro:IPR003122,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,UniProtKB/TrEMBL:A1JIU5,NCBI_GP:CAL10536.1;Name=CAL10536.1;Note=Similar to many including: Escherichia coli methyl-accepting chemotaxis protein I Tsr or ched or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 2e-58%2C 42.61 38d in 528 aa and to Salmonella typhimurium methyl-accepting chemotaxis protein I%2C serine sensor receptor Tsr or stm4533 SWALL:Q8ZJY4 (EMBL:AE008913) (553 aa) fasta scores: E(): 1.1e-59%2C42.39 38d in 526 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P02942;product=methyl-accepting chemotaxis protein;protein_id=CAL10536.1;transl_table=11
AM286415.1	EMBL	sequence_feature	478413	478481	.	+	.	ID=id819;Note=2 probable transmembrane helices predicted for YE0409 by TMHMM2.0 at aa 10-32 and 191-213;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	478956	479024	.	+	.	ID=id819;Note=2 probable transmembrane helices predicted for YE0409 by TMHMM2.0 at aa 10-32 and 191-213;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	478971	479180	.	+	.	ID=id820;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 50.9%2C E-value 1.8e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	479241	479939	.	+	.	ID=id821;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 352.2%2C E-value 3.7e-103;gbkey=misc_feature;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	gene	480178	481191	.	-	.	ID=gene422;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;gene_synonym=fdp;locus_tag=YE0410
AM286415.1	EMBL	CDS	480178	481191	.	-	0	ID=cds391;Parent=gene422;Dbxref=EnsemblGenomes-Gn:YE0410,EnsemblGenomes-Tr:CAL10537,GOA:A1JIU6,InterPro:IPR000146,InterPro:IPR020548,InterPro:IPR028343,NCBI_GP:CAL10537.1;Name=CAL10537.1;gbkey=CDS;gene=fbp;product=fructose-1%2C6-bisphosphatase;protein_id=CAL10537.1;transl_table=11
AM286415.1	EMBL	sequence_feature	480199	481188	.	-	.	ID=id822;Note=Pfam match to entry PF00316 FBPase%2CFructose-1-6-bisphosphatase%2C score 668.2%2C E-value 2.7e-198;gbkey=misc_feature;gene=fbp;inference=protein motif:PFAM:PF00316
AM286415.1	EMBL	sequence_feature	480346	480384	.	-	.	ID=id823;Note=PS00124 Fructose-1-6-bisphosphatase active site.;gbkey=misc_feature;gene=fbp;inference=protein motif:Prosite:PS00124
AM286415.1	EMBL	gene	481361	482746	.	+	.	ID=gene423;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=YE0411
AM286415.1	EMBL	CDS	481361	482746	.	+	0	ID=cds392;Parent=gene423;Dbxref=EnsemblGenomes-Gn:YE0411,EnsemblGenomes-Tr:CAL10538,GOA:A1JIU7,InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005757,InterPro:IPR013221,InterPro:IPR016040,UniProtKB/TrEMBL:A1JIU7,NCBI_GP:CAL10538.1;Name=CAL10538.1;gbkey=CDS;gene=mpl;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-m eso-diaminopimelate ligase;protein_id=CAL10538.1;transl_table=11
AM286415.1	EMBL	sequence_feature	481472	482269	.	+	.	ID=id824;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C catalytic domain%2C score 194.4%2C E-value 1.2e-55;gbkey=misc_feature;gene=mpl;inference=protein motif:PFAM:PF01225
AM286415.1	EMBL	sequence_feature	482291	482563	.	+	.	ID=id825;Note=Pfam match to entry PF02875 Mur_ligase_C%2C Mur ligase family%2C glutamate ligase domain%2C score 72.0%2CE-value 8.3e-19;gbkey=misc_feature;gene=mpl;inference=protein motif:PFAM:PF02875
AM286415.1	EMBL	gene	483000	483263	.	-	.	ID=gene424;Name=YE0412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0412
AM286415.1	EMBL	CDS	483000	483263	.	-	0	ID=cds393;Parent=gene424;Dbxref=EnsemblGenomes-Gn:YE0412,EnsemblGenomes-Tr:CAL10539,InterPro:IPR010854,InterPro:IPR025543,UniProtKB/TrEMBL:A1JIU8,NCBI_GP:CAL10539.1;Name=CAL10539.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10539.1;transl_table=11
AM286415.1	EMBL	gene	483677	484147	.	-	.	ID=gene425;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;gene_synonym=xerA;locus_tag=YE0413
AM286415.1	EMBL	CDS	483677	484147	.	-	0	ID=cds394;Parent=gene425;Dbxref=EnsemblGenomes-Gn:YE0413,EnsemblGenomes-Tr:CAL10540,GOA:A1JIU9,InterPro:IPR001669,InterPro:IPR011991,InterPro:IPR020899,InterPro:IPR020900,InterPro:IPR024946,NCBI_GP:CAL10540.1;Name=CAL10540.1;gbkey=CDS;gene=argR;product=arginine repressor;protein_id=CAL10540.1;transl_table=11
AM286415.1	EMBL	sequence_feature	483695	483907	.	-	.	ID=id826;Note=Pfam match to entry PF02863 Arg_repressor_C%2CArginine repressor%2C C-terminal domain%2C score 120.7%2CE-value 1.7e-33;gbkey=misc_feature;gene=argR;inference=protein motif:PFAM:PF02863
AM286415.1	EMBL	sequence_feature	483917	484141	.	-	.	ID=id827;Note=Pfam match to entry PF01316 Arg_repressor%2C Arginine repressor%2C DNA binding domain%2C score 119.0%2C E-value 5.8e-33;gbkey=misc_feature;gene=argR;inference=protein motif:PFAM:PF01316
AM286415.1	EMBL	gene	484611	485546	.	+	.	ID=gene426;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=YE0414
AM286415.1	EMBL	CDS	484611	485546	.	+	0	ID=cds395;Parent=gene426;Dbxref=EnsemblGenomes-Gn:YE0414,EnsemblGenomes-Tr:CAL10541,GOA:A1JIV0,InterPro:IPR001236,InterPro:IPR001252,InterPro:IPR001557,InterPro:IPR010097,InterPro:IPR015955,InterPro:IPR016040,InterPro:IPR022383,InterPro:IPR023958,NCBI_GP:CAL10541.1;Name=CAL10541.1;gbkey=CDS;gene=mdh;product=malate dehydrogenase;protein_id=CAL10541.1;transl_table=11
AM286415.1	EMBL	sequence_feature	484611	485045	.	+	.	ID=id828;Note=Pfam match to entry PF00056 ldh%2C lactate/malate dehydrogenase%2C NAD binding domain%2C score 230.0%2C E-value 2.2e-66;gbkey=misc_feature;gene=mdh;inference=protein motif:PFAM:PF00056
AM286415.1	EMBL	sequence_feature	485046	485084	.	+	.	ID=id829;Note=PS00068 Malate dehydrogenase active site signature.;gbkey=misc_feature;gene=mdh;inference=protein motif:Prosite:PS00068
AM286415.1	EMBL	sequence_feature	485049	485540	.	+	.	ID=id830;Note=Pfam match to entry PF02866 ldh_C%2C lactate/malate dehydrogenase%2C alpha/beta C-terminal domain%2C score 210.2%2CE-value 2e-60;gbkey=misc_feature;gene=mdh;inference=protein motif:PFAM:PF02866
AM286415.1	EMBL	gene	485623	485898	.	-	.	ID=gene427;Name=YE0415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0415
AM286415.1	EMBL	CDS	485623	485898	.	-	0	ID=cds396;Parent=gene427;Dbxref=EnsemblGenomes-Gn:YE0415,EnsemblGenomes-Tr:CCP19174,GOA:K8FC75,InterPro:IPR010982,UniProtKB/TrEMBL:K8FC75,NCBI_GP:CCP19174.1;Name=CCP19174.1;gbkey=CDS;product=putative sugar fermentation stimulation protein;protein_id=CCP19174.1;transl_table=11
AM286415.1	EMBL	pseudogene	486028	486057	.	+	.	ID=gene428;Name=YE0416;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE0416;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	486061	486429	.	+	.	ID=gene428;Name=YE0416;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE0416;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	486028	486057	.	+	0	ID=cds397;Parent=gene428;Dbxref=PSEUDO:CAL10542.1;Note=CDS contains a premature stop codon following codon 10;gbkey=CDS;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	486061	486429	.	+	0	ID=cds397;Parent=gene428;Dbxref=PSEUDO:CAL10542.1;Note=CDS contains a premature stop codon following codon 10;gbkey=CDS;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	486103	486240	.	+	.	ID=id831;Note=Pfam match to entry PF02316 Mu_DNA_bind%2C Mu DNA-binding domain%2C score 59.0%2C E-value 2.8e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF02316
AM286415.1	EMBL	gene	486490	487461	.	-	.	ID=gene429;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;gene_synonym=cel;locus_tag=YE0417
AM286415.1	EMBL	CDS	486490	487461	.	-	0	ID=cds398;Parent=gene429;Dbxref=EnsemblGenomes-Gn:YE0417,EnsemblGenomes-Tr:CAL10543,GOA:A1JIV2,InterPro:IPR000092,InterPro:IPR008949,InterPro:IPR017446,UniProtKB/TrEMBL:A1JIV2,NCBI_GP:CAL10543.1;Name=CAL10543.1;gbkey=CDS;gene=ispB;product=octaprenyl-diphosphate synthase;protein_id=CAL10543.1;transl_table=11
AM286415.1	EMBL	sequence_feature	486607	487371	.	-	.	ID=id832;Note=Pfam match to entry PF00348 polyprenyl_synt%2CPolyprenyl synthetase%2C score 393.7%2C E-value 1.2e-115;gbkey=misc_feature;gene=ispB;inference=protein motif:PFAM:PF00348
AM286415.1	EMBL	sequence_feature	486817	486855	.	-	.	ID=id833;Note=PS00444 Polyprenyl synthetases signature 2.;gbkey=misc_feature;gene=ispB;inference=protein motif:Prosite:PS00444
AM286415.1	EMBL	sequence_feature	487177	487221	.	-	.	ID=id834;Note=PS00723 Polyprenyl synthetases signature 1.;gbkey=misc_feature;gene=ispB;inference=protein motif:Prosite:PS00723
AM286415.1	EMBL	gene	487721	488032	.	+	.	ID=gene430;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=YE0418
AM286415.1	EMBL	CDS	487721	488032	.	+	0	ID=cds399;Parent=gene430;Dbxref=EnsemblGenomes-Gn:YE0418,EnsemblGenomes-Tr:CAL10544,GOA:A1JIV3,InterPro:IPR001787,InterPro:IPR018258,InterPro:IPR028909,NCBI_GP:CAL10544.1;Name=CAL10544.1;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=CAL10544.1;transl_table=11
AM286415.1	EMBL	sequence_feature	487721	488008	.	+	.	ID=id835;Note=Pfam match to entry PF00829 Ribosomal_L21p%2CRibosomal prokaryotic L21 protein%2C score 189.1%2C E-value 4.5e-54;gbkey=misc_feature;gene=rplU;inference=protein motif:PFAM:PF00829
AM286415.1	EMBL	sequence_feature	487934	488002	.	+	.	ID=id836;Note=PS01169 Ribosomal protein L21 signature.;gbkey=misc_feature;gene=rplU;inference=protein motif:Prosite:PS01169
AM286415.1	EMBL	gene	488052	488309	.	+	.	ID=gene431;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=YE0419
AM286415.1	EMBL	CDS	488052	488309	.	+	0	ID=cds400;Parent=gene431;Dbxref=EnsemblGenomes-Gn:YE0419,EnsemblGenomes-Tr:CAL10545,GOA:A1JIV4,InterPro:IPR001684,InterPro:IPR018261,NCBI_GP:CAL10545.1;Name=CAL10545.1;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=CAL10545.1;transl_table=11
AM286415.1	EMBL	sequence_feature	488055	488300	.	+	.	ID=id837;Note=Pfam match to entry PF01016 Ribosomal_L27%2CRibosomal L27 protein%2C score 197.7%2C E-value 1.2e-56;gbkey=misc_feature;gene=rpmA;inference=protein motif:PFAM:PF01016
AM286415.1	EMBL	sequence_feature	488151	488195	.	+	.	ID=id838;Note=PS00831 Ribosomal protein L27 signature.;gbkey=misc_feature;gene=rpmA;inference=protein motif:Prosite:PS00831
AM286415.1	EMBL	gene	488397	489356	.	+	.	ID=gene432;Name=YE0420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0420
AM286415.1	EMBL	CDS	488397	489356	.	+	0	ID=cds401;Parent=gene432;Dbxref=EnsemblGenomes-Gn:YE0420,EnsemblGenomes-Tr:CAL10546,GOA:A1JIV5,InterPro:IPR000620,UniProtKB/TrEMBL:A1JIV5,NCBI_GP:CAL10546.1;Name=CAL10546.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10546.1;transl_table=11
AM286415.1	EMBL	sequence_feature	488415	488480	.	+	.	ID=id839;Note=10 probable transmembrane helices predicted for YE0420 by TMHMM2.0 at aa 7-28%2C 38-60%2C 73-95%2C 105-122%2C131-150%2C 160-179%2C 192-214%2C 218-239%2C 251-273 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	488508	488576	.	+	.	ID=id839;Note=10 probable transmembrane helices predicted for YE0420 by TMHMM2.0 at aa 7-28%2C 38-60%2C 73-95%2C 105-122%2C131-150%2C 160-179%2C 192-214%2C 218-239%2C 251-273 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	488613	488681	.	+	.	ID=id839;Note=10 probable transmembrane helices predicted for YE0420 by TMHMM2.0 at aa 7-28%2C 38-60%2C 73-95%2C 105-122%2C131-150%2C 160-179%2C 192-214%2C 218-239%2C 251-273 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	488709	488762	.	+	.	ID=id839;Note=10 probable transmembrane helices predicted for YE0420 by TMHMM2.0 at aa 7-28%2C 38-60%2C 73-95%2C 105-122%2C131-150%2C 160-179%2C 192-214%2C 218-239%2C 251-273 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	488787	488846	.	+	.	ID=id839;Note=10 probable transmembrane helices predicted for YE0420 by TMHMM2.0 at aa 7-28%2C 38-60%2C 73-95%2C 105-122%2C131-150%2C 160-179%2C 192-214%2C 218-239%2C 251-273 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	488874	488933	.	+	.	ID=id839;Note=10 probable transmembrane helices predicted for YE0420 by TMHMM2.0 at aa 7-28%2C 38-60%2C 73-95%2C 105-122%2C131-150%2C 160-179%2C 192-214%2C 218-239%2C 251-273 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	488970	489038	.	+	.	ID=id839;Note=10 probable transmembrane helices predicted for YE0420 by TMHMM2.0 at aa 7-28%2C 38-60%2C 73-95%2C 105-122%2C131-150%2C 160-179%2C 192-214%2C 218-239%2C 251-273 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	489048	489113	.	+	.	ID=id839;Note=10 probable transmembrane helices predicted for YE0420 by TMHMM2.0 at aa 7-28%2C 38-60%2C 73-95%2C 105-122%2C131-150%2C 160-179%2C 192-214%2C 218-239%2C 251-273 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	489147	489215	.	+	.	ID=id839;Note=10 probable transmembrane helices predicted for YE0420 by TMHMM2.0 at aa 7-28%2C 38-60%2C 73-95%2C 105-122%2C131-150%2C 160-179%2C 192-214%2C 218-239%2C 251-273 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	489243	489311	.	+	.	ID=id839;Note=10 probable transmembrane helices predicted for YE0420 by TMHMM2.0 at aa 7-28%2C 38-60%2C 73-95%2C 105-122%2C131-150%2C 160-179%2C 192-214%2C 218-239%2C 251-273 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	488451	488834	.	+	.	ID=id840;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 105.9%2C E-value 5.2e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	488907	489299	.	+	.	ID=id841;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 48.7%2C E-value 8.5e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	489388	490560	.	+	.	ID=gene433;Name=YE0421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0421
AM286415.1	EMBL	CDS	489388	490560	.	+	0	ID=cds402;Parent=gene433;Dbxref=EnsemblGenomes-Gn:YE0421,EnsemblGenomes-Tr:CAL10547,GOA:A1JIV6,InterPro:IPR006073,InterPro:IPR006074,InterPro:IPR006169,InterPro:IPR014100,InterPro:IPR027417,NCBI_GP:CAL10547.1;Name=CAL10547.1;gbkey=CDS;product=putative GTP-binding protein;protein_id=CAL10547.1;transl_table=11
AM286415.1	EMBL	sequence_feature	489433	490251	.	+	.	ID=id842;Note=Pfam match to entry PF01018 GTP1_OBG%2C GTP1/OBG family%2C score 447.1%2C E-value 9.9e-132;gbkey=misc_feature;inference=protein motif:PFAM:PF01018
AM286415.1	EMBL	sequence_feature	489883	489906	.	+	.	ID=id843;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	490024	490065	.	+	.	ID=id844;Note=PS00905 GTP1/OBG family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00905
AM286415.1	EMBL	gene	490664	491725	.	-	.	ID=gene434;Name=basS;gbkey=Gene;gene=basS;gene_biotype=protein_coding;gene_synonym=pmrB;locus_tag=YE0422
AM286415.1	EMBL	CDS	490664	491725	.	-	0	ID=cds403;Parent=gene434;Dbxref=EnsemblGenomes-Gn:YE0422,EnsemblGenomes-Tr:CAL10548,GOA:A1JIV7,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB/TrEMBL:A1JIV7,NCBI_GP:CAL10548.1;Name=CAL10548.1;gbkey=CDS;gene=basS;product=two-component system sensor protein;protein_id=CAL10548.1;transl_table=11
AM286415.1	EMBL	sequence_feature	490676	491002	.	-	.	ID=id845;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 99.1%2C E-value 5.8e-27;gbkey=misc_feature;gene=basS;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	491138	491320	.	-	.	ID=id846;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 47.9%2C E-value 1.4e-11;gbkey=misc_feature;gene=basS;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	491330	491539	.	-	.	ID=id847;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 32.9%2C E-value 4.9e-07;gbkey=misc_feature;gene=basS;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	491639	491707	.	-	.	ID=id848;Note=2 probable transmembrane helices predicted for YE0422 by TMHMM2.0 at aa 7-29 and 64-86;gbkey=misc_feature;gene=basS;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	491468	491536	.	-	.	ID=id848;Note=2 probable transmembrane helices predicted for YE0422 by TMHMM2.0 at aa 7-29 and 64-86;gbkey=misc_feature;gene=basS;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	491725	492384	.	-	.	ID=gene435;Name=basR;gbkey=Gene;gene=basR;gene_biotype=protein_coding;gene_synonym=pmrA;locus_tag=YE0423
AM286415.1	EMBL	CDS	491725	492384	.	-	0	ID=cds404;Parent=gene435;Dbxref=EnsemblGenomes-Gn:YE0423,EnsemblGenomes-Tr:CAL10549,GOA:A1JIV8,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB/TrEMBL:A1JIV8,NCBI_GP:CAL10549.1;Name=CAL10549.1;gbkey=CDS;gene=basR;product=two-component system response regulator;protein_id=CAL10549.1;transl_table=11
AM286415.1	EMBL	sequence_feature	491746	491949	.	-	.	ID=id849;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 73.8%2C E-value 2.4e-19;gbkey=misc_feature;gene=basR;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	sequence_feature	492025	492384	.	-	.	ID=id850;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 133.5%2C E-value 2.5e-37;gbkey=misc_feature;gene=basR;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	492304	492336	.	-	.	ID=id851;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=basR;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	492390	493838	.	-	.	ID=gene436;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=YE0424
AM286415.1	EMBL	CDS	492390	493838	.	-	0	ID=cds405;Parent=gene436;Dbxref=EnsemblGenomes-Gn:YE0424,EnsemblGenomes-Tr:CAL10550,GOA:A1JIV9,InterPro:IPR000667,InterPro:IPR012338,UniProtKB/TrEMBL:A1JIV9,NCBI_GP:CAL10550.1;Name=CAL10550.1;gbkey=CDS;gene=dacB;product=penicillin-binding protein 4 precursor;protein_id=CAL10550.1;transl_table=11
AM286415.1	EMBL	sequence_feature	492486	493646	.	-	.	ID=id852;Note=Pfam match to entry PF02113 Peptidase_S13%2CD-Ala-D-Ala carboxypeptidase 3 (S13) family%2C score 676.7%2CE-value 7.8e-201;gbkey=misc_feature;gene=dacB;inference=protein motif:PFAM:PF02113
AM286415.1	EMBL	gene	494097	494573	.	+	.	ID=gene437;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=YE0425
AM286415.1	EMBL	CDS	494097	494573	.	+	0	ID=cds406;Parent=gene437;Dbxref=EnsemblGenomes-Gn:YE0425,EnsemblGenomes-Tr:CAL10551,GOA:A1JIW0,InterPro:IPR001437,InterPro:IPR006359,InterPro:IPR018151,InterPro:IPR022691,InterPro:IPR023459,InterPro:IPR028624,UniProtKB/TrEMBL:A1JIW0,NCBI_GP:CAL10551.1;Name=CAL10551.1;gbkey=CDS;gene=greA;product=transcription elongation factor;protein_id=CAL10551.1;transl_table=11
AM286415.1	EMBL	sequence_feature	494097	494318	.	+	.	ID=id853;Note=Pfam match to entry PF03449 GreA_GreB_N%2CProkaryotic transcription elongation factor%2C GreA/GreB%2CN-terminal domain%2C score 165.0%2C E-value 8.3e-47;gbkey=misc_feature;gene=greA;inference=protein motif:PFAM:PF03449
AM286415.1	EMBL	sequence_feature	494115	494240	.	+	.	ID=id854;Note=PS00829 Prokaryotic transcription elongation factors signature 1.;gbkey=misc_feature;gene=greA;inference=protein motif:Prosite:PS00829
AM286415.1	EMBL	sequence_feature	494334	494567	.	+	.	ID=id855;Note=Pfam match to entry PF01272 GreA_GreB%2C Prokaryotic transcription elongation factor%2C GreA/GreB%2C C-terminal domain%2C score 151.8%2C E-value 7.7e-43;gbkey=misc_feature;gene=greA;inference=protein motif:PFAM:PF01272
AM286415.1	EMBL	sequence_feature	494457	494507	.	+	.	ID=id856;Note=PS00830 Prokaryotic transcription elongation factors signature 2.;gbkey=misc_feature;gene=greA;inference=protein motif:Prosite:PS00830
AM286415.1	EMBL	gene	494702	494995	.	-	.	ID=gene438;Name=YE0426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0426
AM286415.1	EMBL	CDS	494702	494995	.	-	0	ID=cds407;Parent=gene438;Dbxref=EnsemblGenomes-Gn:YE0426,EnsemblGenomes-Tr:CAL10552,GOA:A1JIW1,InterPro:IPR001890,InterPro:IPR017924,UniProtKB/TrEMBL:A1JIW1,NCBI_GP:CAL10552.1;Name=CAL10552.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10552.1;transl_table=11
AM286415.1	EMBL	sequence_feature	494738	494950	.	-	.	ID=id857;Note=Pfam match to entry PF01985 UPF0044%2CUncharacterised protein family UPF0044%2C score 28.7%2CE-value 8.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01985
AM286415.1	EMBL	gene	495142	495771	.	+	.	ID=gene439;Name=ftsJ;gbkey=Gene;gene=ftsJ;gene_biotype=protein_coding;gene_synonym=mrsF,rrmJ;locus_tag=YE0427
AM286415.1	EMBL	CDS	495142	495771	.	+	0	ID=cds408;Parent=gene439;Dbxref=EnsemblGenomes-Gn:YE0427,EnsemblGenomes-Tr:CAL10553,GOA:A1JIW2,InterPro:IPR002877,InterPro:IPR004512,InterPro:IPR015507,InterPro:IPR029063,NCBI_GP:CAL10553.1;Name=CAL10553.1;gbkey=CDS;gene=ftsJ;product=ribosomal RNA large subunit methyltransferase J;protein_id=CAL10553.1;transl_table=11
AM286415.1	EMBL	sequence_feature	495232	495768	.	+	.	ID=id858;Note=Pfam match to entry PF01728 FtsJ%2C FtsJ-like methyltransferase%2C score 274.1%2C E-value 1.2e-79;gbkey=misc_feature;gene=ftsJ;inference=protein motif:PFAM:PF01728
AM286415.1	EMBL	gene	495828	497762	.	+	.	ID=gene440;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=hflB,mrsC,tolZ;locus_tag=YE0428
AM286415.1	EMBL	CDS	495828	497762	.	+	0	ID=cds409;Parent=gene440;Dbxref=EnsemblGenomes-Gn:YE0428,EnsemblGenomes-Tr:CAL10554,GOA:A1JIW3,InterPro:IPR000642,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR003960,InterPro:IPR005936,InterPro:IPR011546,InterPro:IPR027417,UniProtKB/TrEMBL:A1JIW3,NCBI_GP:CAL10554.1;Name=CAL10554.1;gbkey=CDS;gene=ftsH;product=cell division protein;protein_id=CAL10554.1;transl_table=11
AM286415.1	EMBL	sequence_feature	495840	495899	.	+	.	ID=id859;Note=2 probable transmembrane helices predicted for YE0428 by TMHMM2.0 at aa 5-24 and 97-119;gbkey=misc_feature;gene=ftsH;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	496116	496184	.	+	.	ID=id859;Note=2 probable transmembrane helices predicted for YE0428 by TMHMM2.0 at aa 5-24 and 97-119;gbkey=misc_feature;gene=ftsH;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	496215	496238	.	+	.	ID=id860;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ftsH;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	496386	496949	.	+	.	ID=id861;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 332.4%2C E-value 3.4e-97;gbkey=misc_feature;gene=ftsH;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	496401	496424	.	+	.	ID=id862;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ftsH;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	496698	496754	.	+	.	ID=id863;Note=PS00674 AAA-protein family signature.;gbkey=misc_feature;gene=ftsH;inference=protein motif:Prosite:PS00674
AM286415.1	EMBL	sequence_feature	496965	497603	.	+	.	ID=id864;Note=Pfam match to entry PF01434 Peptidase_M41%2CPeptidase family M41%2C score 437.2%2C E-value 9.5e-129;gbkey=misc_feature;gene=ftsH;inference=protein motif:PFAM:PF01434
AM286415.1	EMBL	gene	497847	498680	.	+	.	ID=gene441;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;gene_synonym=dhpS;locus_tag=YE0429
AM286415.1	EMBL	CDS	497847	498680	.	+	0	ID=cds410;Parent=gene441;Dbxref=EnsemblGenomes-Gn:YE0429,EnsemblGenomes-Tr:CAL10555,GOA:A1JIW4,InterPro:IPR000489,InterPro:IPR006390,InterPro:IPR011005,UniProtKB/TrEMBL:A1JIW4,NCBI_GP:CAL10555.1;Name=CAL10555.1;gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=CAL10555.1;transl_table=11
AM286415.1	EMBL	sequence_feature	497895	497942	.	+	.	ID=id865;Note=PS00792 Dihydropteroate synthase signature 1.;gbkey=misc_feature;gene=folP;inference=protein motif:Prosite:PS00792
AM286415.1	EMBL	sequence_feature	497904	498629	.	+	.	ID=id866;Note=Pfam match to entry PF00809 Pterin_bind%2C Pterin binding enzyme%2C score 400.9%2C E-value 8.1e-118;gbkey=misc_feature;gene=folP;inference=protein motif:PFAM:PF00809
AM286415.1	EMBL	sequence_feature	497997	498038	.	+	.	ID=id867;Note=PS00793 Dihydropteroate synthase signature 2.;gbkey=misc_feature;gene=folP;inference=protein motif:Prosite:PS00793
AM286415.1	EMBL	gene	498690	500030	.	+	.	ID=gene442;Name=mrsA;gbkey=Gene;gene=mrsA;gene_biotype=protein_coding;locus_tag=YE0430
AM286415.1	EMBL	CDS	498690	500030	.	+	0	ID=cds411;Parent=gene442;Dbxref=EnsemblGenomes-Gn:YE0430,EnsemblGenomes-Tr:CAL10556,GOA:A1JIW5,InterPro:IPR005841,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR006352,InterPro:IPR016055,InterPro:IPR016066,NCBI_GP:CAL10556.1;Name=CAL10556.1;gbkey=CDS;gene=mrsA;product=probable phosphoglucomutase/phosphomannomutase;protein_id=CAL10556.1;transl_table=11
AM286415.1	EMBL	sequence_feature	498690	499121	.	+	.	ID=id868;Note=Pfam match to entry PF02878 PGM_PMM_I%2CPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I%2C score 212.3%2C E-value 4.6e-61;gbkey=misc_feature;gene=mrsA;inference=protein motif:PFAM:PF02878
AM286415.1	EMBL	sequence_feature	498975	499019	.	+	.	ID=id869;Note=PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature.;gbkey=misc_feature;gene=mrsA;inference=protein motif:Prosite:PS00710
AM286415.1	EMBL	sequence_feature	499155	499457	.	+	.	ID=id870;Note=Pfam match to entry PF02879 PGM_PMM_II%2CPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%2C score 167.6%2C E-value 1.3e-47;gbkey=misc_feature;gene=mrsA;inference=protein motif:PFAM:PF02879
AM286415.1	EMBL	sequence_feature	499461	499796	.	+	.	ID=id871;Note=Pfam match to entry PF02880 PGM_PMM_III%2CPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%2C score 143.2%2C E-value 3e-40;gbkey=misc_feature;gene=mrsA;inference=protein motif:PFAM:PF02880
AM286415.1	EMBL	sequence_feature	499806	500021	.	+	.	ID=id872;Note=Pfam match to entry PF00408 PGM_PMM%2CPhosphoglucomutase/phosphomannomutase%2C C-terminal domain %2Cscore 53.0%2C E-value 4.3e-13;gbkey=misc_feature;gene=mrsA;inference=protein motif:PFAM:PF00408
AM286415.1	EMBL	gene	500254	500589	.	+	.	ID=gene443;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=YE0431
AM286415.1	EMBL	CDS	500254	500589	.	+	0	ID=cds412;Parent=gene443;Dbxref=EnsemblGenomes-Gn:YE0431,EnsemblGenomes-Tr:CAL10557,GOA:A1JIW6,InterPro:IPR004692,UniProtKB/TrEMBL:A1JIW6,NCBI_GP:CAL10557.1;Name=CAL10557.1;gbkey=CDS;gene=secG;product=protein-export membrane protein;protein_id=CAL10557.1;transl_table=11
AM286415.1	EMBL	sequence_feature	500257	500478	.	+	.	ID=id873;Note=Pfam match to entry PF03840 SecG%2C Preprotein translocase SecG subunit%2C score 121.4%2C E-value 1.1e-33;gbkey=misc_feature;gene=secG;inference=protein motif:PFAM:PF03840
AM286415.1	EMBL	sequence_feature	500266	500319	.	+	.	ID=id874;Note=2 probable transmembrane helices predicted for YE0431 by TMHMM2.0 at aa 5-22 and 51-70;gbkey=misc_feature;gene=secG;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	500404	500463	.	+	.	ID=id874;Note=2 probable transmembrane helices predicted for YE0431 by TMHMM2.0 at aa 5-22 and 51-70;gbkey=misc_feature;gene=secG;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	500681	500767	.	+	.	ID=gene444;Name=tRNA-Leu (GAG);gbkey=Gene;gene=tRNA-Leu (GAG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	500681	500767	.	+	.	ID=rna36;Parent=gene444;gbkey=tRNA;gene=tRNA-Leu (GAG);product=tRNA-Leu
AM286415.1	EMBL	exon	500681	500767	.	+	.	ID=id875;Parent=rna36;gbkey=tRNA;gene=tRNA-Leu (GAG);product=tRNA-Leu
AM286415.1	EMBL	gene	500828	500904	.	+	.	ID=gene445;Name=tRNA-Met (CAT);gbkey=Gene;gene=tRNA-Met (CAT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	500828	500904	.	+	.	ID=rna37;Parent=gene445;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	exon	500828	500904	.	+	.	ID=id876;Parent=rna37;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	gene	501114	501572	.	+	.	ID=gene446;Name=YE0432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0432
AM286415.1	EMBL	CDS	501114	501572	.	+	0	ID=cds413;Parent=gene446;Dbxref=EnsemblGenomes-Gn:YE0432,EnsemblGenomes-Tr:CAL10558,GOA:A1JIW7,InterPro:IPR003728,InterPro:IPR028989,InterPro:IPR028998,NCBI_GP:CAL10558.1;Name=CAL10558.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10558.1;transl_table=11
AM286415.1	EMBL	sequence_feature	501150	501557	.	+	.	ID=id877;Note=Pfam match to entry PF02576 DUF150%2C Uncharacterized BCR%2C YhbC family COG0779%2C score 260.0%2C E-value 2.1e-75;gbkey=misc_feature;inference=protein motif:PFAM:PF02576
AM286415.1	EMBL	gene	501594	503081	.	+	.	ID=gene447;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=YE0433
AM286415.1	EMBL	CDS	501594	503081	.	+	0	ID=cds414;Parent=gene447;Dbxref=EnsemblGenomes-Gn:YE0433,EnsemblGenomes-Tr:CAL10559,GOA:A1JIW8,InterPro:IPR003029,InterPro:IPR004087,InterPro:IPR004088,InterPro:IPR009019,InterPro:IPR010213,InterPro:IPR010214,InterPro:IPR010995,InterPro:IPR012340,InterPro:IPR013735,InterPro:IPR015946,InterPro:IPR022967,InterPro:IPR025249,InterPro:IPR028620,UniProtKB/TrEMBL:A1JIW8,NCBI_GP:CAL10559.1;Name=CAL10559.1;gbkey=CDS;gene=nusA;product=N utilization substance protein A;protein_id=CAL10559.1;transl_table=11
AM286415.1	EMBL	sequence_feature	501984	502187	.	+	.	ID=id878;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 42.8%2C E-value 5e-10;gbkey=misc_feature;gene=nusA;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	gene	503106	505784	.	+	.	ID=gene448;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;gene_synonym=ssyG;locus_tag=YE0434
AM286415.1	EMBL	CDS	503106	505784	.	+	0	ID=cds415;Parent=gene448;Dbxref=EnsemblGenomes-Gn:YE0434,EnsemblGenomes-Tr:CAL10560,GOA:A1JIW9,InterPro:IPR000178,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR006847,InterPro:IPR009000,InterPro:IPR009061,InterPro:IPR013575,InterPro:IPR015760,InterPro:IPR023115,InterPro:IPR027417,NCBI_GP:CAL10560.1;Name=CAL10560.1;gbkey=CDS;gene=infB;product=translation initiation factor IF2-2;protein_id=CAL10560.1;transl_table=11
AM286415.1	EMBL	sequence_feature	504276	504779	.	+	.	ID=id879;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu GTP binding domain%2C score 186.1%2C E-value 3.7e-53;gbkey=misc_feature;gene=infB;inference=protein motif:PFAM:PF00009
AM286415.1	EMBL	sequence_feature	504303	504326	.	+	.	ID=id880;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=infB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	504810	505037	.	+	.	ID=id881;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 65.2%2C E-value 8.9e-17;gbkey=misc_feature;gene=infB;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	sequence_feature	505512	505745	.	+	.	ID=id882;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 58.4%2C E-value 1e-14;gbkey=misc_feature;gene=infB;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	sequence_feature	505629	505697	.	+	.	ID=id883;Note=PS01176 Initiation factor 2 signature.;gbkey=misc_feature;gene=infB;inference=protein motif:Prosite:PS01176
AM286415.1	EMBL	gene	505851	506261	.	+	.	ID=gene449;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;gene_synonym=p15B;locus_tag=YE0435
AM286415.1	EMBL	CDS	505851	506261	.	+	0	ID=cds416;Parent=gene449;Dbxref=EnsemblGenomes-Gn:YE0435,EnsemblGenomes-Tr:CAL10561,GOA:A1JIX0,InterPro:IPR000238,InterPro:IPR015946,InterPro:IPR020053,InterPro:IPR023799,NCBI_GP:CAL10561.1;Name=CAL10561.1;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=CAL10561.1;transl_table=11
AM286415.1	EMBL	sequence_feature	505869	506198	.	+	.	ID=id884;Note=Pfam match to entry PF02033 RBFA%2C Ribosome-binding factor A%2C score 182.1%2C E-value 5.9e-52;gbkey=misc_feature;gene=rbfA;inference=protein motif:PFAM:PF02033
AM286415.1	EMBL	sequence_feature	506094	506159	.	+	.	ID=id885;Note=PS01319 Ribosome-binding factor A signature.;gbkey=misc_feature;gene=rbfA;inference=protein motif:Prosite:PS01319
AM286415.1	EMBL	gene	506261	507250	.	+	.	ID=gene450;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;gene_synonym=p35;locus_tag=YE0436
AM286415.1	EMBL	CDS	506261	507250	.	+	0	ID=cds417;Parent=gene450;Dbxref=EnsemblGenomes-Gn:YE0436,EnsemblGenomes-Tr:CAL10562,GOA:A1JIX1,InterPro:IPR002501,InterPro:IPR014780,InterPro:IPR015240,InterPro:IPR015947,InterPro:IPR020103,NCBI_GP:CAL10562.1;Name=CAL10562.1;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=CAL10562.1;transl_table=11
AM286415.1	EMBL	sequence_feature	506348	506800	.	+	.	ID=id886;Note=Pfam match to entry PF01509 TruB_N%2C TruB family pseudouridylate synthase (N terminal domain)%2C score 308.8%2C E-value 4.4e-90;gbkey=misc_feature;gene=truB;inference=protein motif:PFAM:PF01509
AM286415.1	EMBL	sequence_feature	506705	506746	.	+	.	ID=id887;Note=PS01109 Ribosomal protein L10 signature.;gbkey=misc_feature;gene=truB;inference=protein motif:Prosite:PS01109
AM286415.1	EMBL	transcript	507310	507428	.	+	.	ID=rna38;Note=Ribosomal S15 leader (RF00114) as predicted by Rfam%2C score 81.93%2C positions 1 to 119;gbkey=misc_RNA
AM286415.1	EMBL	exon	507310	507428	.	+	.	ID=id888;Parent=rna38;Note=Ribosomal S15 leader (RF00114) as predicted by Rfam%2C score 81.93%2C positions 1 to 119;gbkey=misc_RNA
AM286415.1	EMBL	gene	507372	507641	.	+	.	ID=gene451;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;gene_synonym=secC;locus_tag=YE0437
AM286415.1	EMBL	CDS	507372	507641	.	+	0	ID=cds418;Parent=gene451;Dbxref=EnsemblGenomes-Gn:YE0437,EnsemblGenomes-Tr:CAL10563,GOA:A1JIX2,InterPro:IPR000589,InterPro:IPR005290,InterPro:IPR009068,NCBI_GP:CAL10563.1;Name=CAL10563.1;gbkey=CDS;gene=rpsO;product=30S ribosomal protein S15;protein_id=CAL10563.1;transl_table=11
AM286415.1	EMBL	sequence_feature	507375	507635	.	+	.	ID=id889;Note=Pfam match to entry PF00312 Ribosomal_S15%2CRibosomal protein S15%2C score 160.0%2C E-value 2.7e-45;gbkey=misc_feature;gene=rpsO;inference=protein motif:PFAM:PF00312
AM286415.1	EMBL	sequence_feature	507486	507578	.	+	.	ID=id890;Note=PS00362 Ribosomal protein S15 signature.;gbkey=misc_feature;gene=rpsO;inference=protein motif:Prosite:PS00362
AM286415.1	EMBL	transcript	507658	507838	.	-	.	ID=rna39;Note=SraG RNA (RF00082) as predicted by Rfam%2C score 69.23%2C positions 1 to 176;gbkey=misc_RNA
AM286415.1	EMBL	exon	507658	507838	.	-	.	ID=id891;Parent=rna39;Note=SraG RNA (RF00082) as predicted by Rfam%2C score 69.23%2C positions 1 to 176;gbkey=misc_RNA
AM286415.1	EMBL	gene	507904	510024	.	+	.	ID=gene452;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=YE0438
AM286415.1	EMBL	CDS	507904	510024	.	+	0	ID=cds419;Parent=gene452;Dbxref=EnsemblGenomes-Gn:YE0438,EnsemblGenomes-Tr:CAL10564,GOA:A1JIX3,InterPro:IPR001247,InterPro:IPR003029,InterPro:IPR004087,InterPro:IPR004088,InterPro:IPR012162,InterPro:IPR012340,InterPro:IPR015847,InterPro:IPR015848,InterPro:IPR020568,InterPro:IPR022967,InterPro:IPR027408,NCBI_GP:CAL10564.1;Name=CAL10564.1;gbkey=CDS;gene=pnp;product=polyribonucleotide nucleotidyltransferase;protein_id=CAL10564.1;transl_table=11
AM286415.1	EMBL	sequence_feature	507937	508335	.	+	.	ID=id892;Note=Pfam match to entry PF01138 RNase_PH%2C 3' exoribonuclease family%2C domain 1%2C score 157.5%2C E-value 1.5e-44;gbkey=misc_feature;gene=pnp;inference=protein motif:PFAM:PF01138
AM286415.1	EMBL	sequence_feature	508342	508536	.	+	.	ID=id893;Note=Pfam match to entry PF03725 RNase_PH_C%2C 3' exoribonuclease family%2C domain 2%2C score 71.3%2C E-value 1.3e-18;gbkey=misc_feature;gene=pnp;inference=protein motif:PFAM:PF03725
AM286415.1	EMBL	sequence_feature	508627	508863	.	+	.	ID=id894;Note=Pfam match to entry PF03726 PNPase%2CPolyribonucleotide nucleotidyltransferase%2C RNA binding domain%2C score 135.3%2C E-value 6.9e-38;gbkey=misc_feature;gene=pnp;inference=protein motif:PFAM:PF03726
AM286415.1	EMBL	sequence_feature	508870	509271	.	+	.	ID=id895;Note=Pfam match to entry PF01138 RNase_PH%2C 3' exoribonuclease family%2C domain 1%2C score 184.0%2C E-value 1.5e-52;gbkey=misc_feature;gene=pnp;inference=protein motif:PFAM:PF01138
AM286415.1	EMBL	sequence_feature	509278	509490	.	+	.	ID=id896;Note=Pfam match to entry PF03725 RNase_PH_C%2C 3' exoribonuclease family%2C domain 2%2C score 83.3%2C E-value 3.2e-22;gbkey=misc_feature;gene=pnp;inference=protein motif:PFAM:PF03725
AM286415.1	EMBL	sequence_feature	509572	509712	.	+	.	ID=id897;Note=Pfam match to entry PF00013 KH%2C KH domain%2C score 47.1%2C E-value 2.6e-11;gbkey=misc_feature;gene=pnp;inference=protein motif:PFAM:PF00013
AM286415.1	EMBL	sequence_feature	509755	509973	.	+	.	ID=id898;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 100.5%2C E-value 2.1e-27;gbkey=misc_feature;gene=pnp;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	gene	510147	511031	.	+	.	ID=gene453;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=YE0439
AM286415.1	EMBL	CDS	510147	511031	.	+	0	ID=cds420;Parent=gene453;Dbxref=EnsemblGenomes-Gn:YE0439,EnsemblGenomes-Tr:CAL10565,GOA:A1JIX4,InterPro:IPR001440,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,InterPro:IPR023605,UniProtKB/TrEMBL:A1JIX4,NCBI_GP:CAL10565.1;Name=CAL10565.1;gbkey=CDS;gene=nlpI;product=lipoprotein NlpI;protein_id=CAL10565.1;transl_table=11
AM286415.1	EMBL	sequence_feature	510171	510203	.	+	.	ID=id899;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nlpI;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	510330	510431	.	+	.	ID=id900;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 26.1%2C E-value 5.4e-05;gbkey=misc_feature;gene=nlpI;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	sequence_feature	510432	510533	.	+	.	ID=id901;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 32.6%2C E-value 5.7e-07;gbkey=misc_feature;gene=nlpI;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	gene	511217	513190	.	+	.	ID=gene454;Name=deaD;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;gene_synonym=csdA,mssB;locus_tag=YE0440
AM286415.1	EMBL	CDS	511217	513190	.	+	0	ID=cds421;Parent=gene454;Dbxref=EnsemblGenomes-Gn:YE0440,EnsemblGenomes-Tr:CAL10566,GOA:A1JIX5,InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR005580,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR021046,InterPro:IPR027417,InterPro:IPR028618,UniProtKB/TrEMBL:A1JIX5,NCBI_GP:CAL10566.1;Name=CAL10566.1;gbkey=CDS;gene=deaD;product=cold-shock dead-box protein A;protein_id=CAL10566.1;transl_table=11
AM286415.1	EMBL	sequence_feature	511274	511888	.	+	.	ID=id902;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 300.5%2C E-value 1.3e-87;gbkey=misc_feature;gene=deaD;inference=protein motif:PFAM:PF00270
AM286415.1	EMBL	sequence_feature	511367	511390	.	+	.	ID=id903;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=deaD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	511679	511705	.	+	.	ID=id904;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;gbkey=misc_feature;gene=deaD;inference=protein motif:Prosite:PS00039
AM286415.1	EMBL	sequence_feature	512024	512239	.	+	.	ID=id905;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 121.5%2C E-value 1e-33;gbkey=misc_feature;gene=deaD;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	512666	512920	.	+	.	ID=id906;Note=Pfam match to entry PF03880 DbpA%2C DbpA RNA binding domain%2C score 144.0%2C E-value 1.8e-40;gbkey=misc_feature;gene=deaD;inference=protein motif:PFAM:PF03880
AM286415.1	EMBL	gene	513550	513822	.	+	.	ID=gene455;Name=YE0441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0441
AM286415.1	EMBL	CDS	513550	513822	.	+	0	ID=cds422;Parent=gene455;Dbxref=EnsemblGenomes-Gn:YE0441,EnsemblGenomes-Tr:CAL10567,UniProtKB/TrEMBL:A1JIX6,NCBI_GP:CAL10567.1;Name=CAL10567.1;Note=no significant database hits;gbkey=CDS;product=putative lipoprotein;protein_id=CAL10567.1;transl_table=11
AM286415.1	EMBL	sequence_feature	513571	513603	.	+	.	ID=id907;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	514238	515260	.	-	.	ID=gene456;Name=YE0442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0442
AM286415.1	EMBL	CDS	514238	515260	.	-	0	ID=cds423;Parent=gene456;Dbxref=EnsemblGenomes-Gn:YE0442,EnsemblGenomes-Tr:CAL10568,GOA:A1JIX7,InterPro:IPR011251,InterPro:IPR019949,UniProtKB/TrEMBL:A1JIX7,NCBI_GP:CAL10568.1;Name=CAL10568.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10568.1;transl_table=11
AM286415.1	EMBL	sequence_feature	514337	515233	.	-	.	ID=id908;Note=Pfam match to entry PF00296 bac_luciferase%2CLuciferase-like monooxygenase%2C score 119.0%2C E-value 6e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00296
AM286415.1	EMBL	gene	515727	516887	.	+	.	ID=gene457;Name=YE0443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0443
AM286415.1	EMBL	CDS	515727	516887	.	+	0	ID=cds424;Parent=gene457;Dbxref=EnsemblGenomes-Gn:YE0443,EnsemblGenomes-Tr:CAL10569,GOA:A1JIX8,InterPro:IPR006143,UniProtKB/TrEMBL:A1JIX8,NCBI_GP:CAL10569.1;Name=CAL10569.1;gbkey=CDS;product=multidrug efflux protein;protein_id=CAL10569.1;transl_table=11
AM286415.1	EMBL	sequence_feature	515745	515777	.	+	.	ID=id909;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	515892	516779	.	+	.	ID=id910;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 220.7%2C E-value 1.4e-63;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	gene	516891	520016	.	+	.	ID=gene458;Name=YE0444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0444
AM286415.1	EMBL	CDS	516891	520016	.	+	0	ID=cds425;Parent=gene458;Dbxref=EnsemblGenomes-Gn:YE0444,EnsemblGenomes-Tr:CAL10570,GOA:A1JIX9,InterPro:IPR001036,InterPro:IPR004764,InterPro:IPR027463,UniProtKB/TrEMBL:A1JIX9,NCBI_GP:CAL10570.1;Name=CAL10570.1;gbkey=CDS;product=multidrug efflux protein;protein_id=CAL10570.1;transl_table=11
AM286415.1	EMBL	sequence_feature	516894	519965	.	+	.	ID=id911;Note=Pfam match to entry PF00873 ACR_tran%2CAcrB/AcrD/AcrF family%2C score 1634.1%2C E-value 0;gbkey=misc_feature;inference=protein motif:PFAM:PF00873
AM286415.1	EMBL	sequence_feature	516903	516971	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	517911	517970	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	517989	518057	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	518067	518135	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	518205	518273	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	518316	518384	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	518508	518576	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	518709	518777	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	519495	519563	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	519573	519641	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	519798	519866	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	519894	519962	.	+	.	ID=id912;Note=12 probable transmembrane helices predicted for YE0444 by TMHMM2.0 at aa 5-27%2C 341-360%2C 367-389%2C 393-415%2C439-461%2C 476-498%2C 540-562%2C 607-629%2C 869-891%2C 895-917%2C970-992 and 1002-1024;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	520018	521424	.	+	.	ID=gene459;Name=ibeB;gbkey=Gene;gene=ibeB;gene_biotype=protein_coding;locus_tag=YE0445
AM286415.1	EMBL	CDS	520018	521424	.	+	0	ID=cds426;Parent=gene459;Dbxref=EnsemblGenomes-Gn:YE0445,EnsemblGenomes-Tr:CAL10571,GOA:A1JIY0,InterPro:IPR003423,InterPro:IPR010131,UniProtKB/TrEMBL:A1JIY0,NCBI_GP:CAL10571.1;Name=CAL10571.1;gbkey=CDS;gene=ibeB;product=probable outer membrane efflux lipoprotein;protein_id=CAL10571.1;transl_table=11
AM286415.1	EMBL	sequence_feature	520036	520068	.	+	.	ID=id913;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ibeB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	520192	520800	.	+	.	ID=id914;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 150.2%2C E-value 2.3e-42;gbkey=misc_feature;gene=ibeB;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	sequence_feature	520834	521421	.	+	.	ID=id915;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 184.9%2C E-value 8.2e-53;gbkey=misc_feature;gene=ibeB;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	gene	522019	523344	.	+	.	ID=gene460;Name=YE0447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0447
AM286415.1	EMBL	CDS	522019	523344	.	+	0	ID=cds427;Parent=gene460;Dbxref=EnsemblGenomes-Gn:YE0447,EnsemblGenomes-Tr:CAL10572,GOA:A1JIY1,UniProtKB/TrEMBL:A1JIY1,NCBI_GP:CAL10572.1;Name=CAL10572.1;gbkey=CDS;product=putative transmembrane transport protein;protein_id=CAL10572.1;transl_table=11
AM286415.1	EMBL	sequence_feature	522133	522201	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	522214	522282	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	522355	522423	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	522466	522534	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	522571	522639	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	522682	522750	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	522811	522879	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	522961	523029	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	523090	523158	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	523171	523239	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	523276	523335	.	+	.	ID=id916;Note=11 probable transmembrane helices predicted for YE0447 by TMHMM2.0 at aa 39-61%2C 66-88%2C 113-135%2C 150-172%2C185-207%2C 222-244%2C 265-287%2C 315-337%2C 358-380%2C 385-407 and 420-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	523189	523221	.	+	.	ID=id917;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	523394	524710	.	+	.	ID=gene461;Name=YE0448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0448
AM286415.1	EMBL	CDS	523394	524710	.	+	0	ID=cds428;Parent=gene461;Dbxref=EnsemblGenomes-Gn:YE0448,EnsemblGenomes-Tr:CAL10573,InterPro:IPR005130,InterPro:IPR021144,NCBI_GP:CAL10573.1;Name=CAL10573.1;Note=Similar to many proteins of undefined function including: Salmonella typhi hypothetical protein Sty3418 SWALL:Q8Z3K8 (EMBL:AL627278) (436 aa) fasta scores: E(): 1.7e-102%2C 64.98 38d in 437 aa%2C Escherichia coli hypothetical protein YhaM or b3108/b3109 SWALL:YHAM_ECOLI (SWALL:P42626) (437 aa) fasta scores: E(): 1.6e-101%2C65.36 38d in 436 aa and Streptococcus pneumoniae L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit sp0105 SWALL:Q97T50 (EMBL:AE007327) (290 aa) fasta scores: E(): 1.1%2C 26.87 38d in 227 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P42626;product=conserved hypothetical protein;protein_id=CAL10573.1;transl_table=11
AM286415.1	EMBL	gene	524772	525650	.	-	.	ID=gene462;Name=YE0449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0449
AM286415.1	EMBL	CDS	524772	525650	.	-	0	ID=cds429;Parent=gene462;Dbxref=EnsemblGenomes-Gn:YE0449,EnsemblGenomes-Tr:CAL10574,GOA:A1JIY3,InterPro:IPR001539,UniProtKB/TrEMBL:A1JIY3,NCBI_GP:CAL10574.1;Name=CAL10574.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10574.1;transl_table=11
AM286415.1	EMBL	gene	525662	526657	.	-	.	ID=gene463;Name=YE0450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0450
AM286415.1	EMBL	CDS	525662	526657	.	-	0	ID=cds430;Parent=gene463;Dbxref=EnsemblGenomes-Gn:YE0450,EnsemblGenomes-Tr:CAL10575,GOA:A1JIY4,InterPro:IPR001539,InterPro:IPR022998,UniProtKB/TrEMBL:A1JIY4,NCBI_GP:CAL10575.1;Name=CAL10575.1;gbkey=CDS;product=putative protease;protein_id=CAL10575.1;transl_table=11
AM286415.1	EMBL	sequence_feature	525665	526438	.	-	.	ID=id918;Note=Pfam match to entry PF01136 Peptidase_U32%2CPeptidase family U32%2C score 494.4%2C E-value 5.7e-146;gbkey=misc_feature;inference=protein motif:PFAM:PF01136
AM286415.1	EMBL	sequence_feature	526121	526177	.	-	.	ID=id919;Note=PS01276 Peptidase family U32 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01276
AM286415.1	EMBL	gene	526864	527385	.	+	.	ID=gene464;Name=YE0451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0451
AM286415.1	EMBL	CDS	526864	527385	.	+	0	ID=cds431;Parent=gene464;Dbxref=EnsemblGenomes-Gn:YE0451,EnsemblGenomes-Tr:CAL10576,InterPro:IPR003033,InterPro:IPR016830,UniProtKB/TrEMBL:A1JIY5,NCBI_GP:CAL10576.1;Name=CAL10576.1;gbkey=CDS;product=putative lipid carrier protein;protein_id=CAL10576.1;transl_table=11
AM286415.1	EMBL	sequence_feature	526951	527271	.	+	.	ID=id920;Note=Pfam match to entry PF02036 SCP2%2C SCP-2 sterol transfer family%2C score 89.5%2C E-value 4.4e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF02036
AM286415.1	EMBL	gene	527379	527882	.	+	.	ID=gene465;Name=YE0452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0452
AM286415.1	EMBL	CDS	527379	527882	.	+	0	ID=cds432;Parent=gene465;Dbxref=EnsemblGenomes-Gn:YE0452,EnsemblGenomes-Tr:CAL10577,GOA:A1JIY6,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JIY6,NCBI_GP:CAL10577.1;Name=CAL10577.1;gbkey=CDS;product=putative acetyltransferase;protein_id=CAL10577.1;transl_table=11
AM286415.1	EMBL	sequence_feature	527511	527747	.	+	.	ID=id921;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 49.1%2C E-value 6.2e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	527869	528162	.	-	.	ID=gene466;Name=YE0453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0453
AM286415.1	EMBL	CDS	527869	528162	.	-	0	ID=cds433;Parent=gene466;Dbxref=EnsemblGenomes-Gn:YE0453,EnsemblGenomes-Tr:CAL10578,GOA:A1JIY7,InterPro:IPR000305,InterPro:IPR022992,NCBI_GP:CAL10578.1;Name=CAL10578.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10578.1;transl_table=11
AM286415.1	EMBL	gene	528299	529615	.	-	.	ID=gene467;Name=YE0454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0454
AM286415.1	EMBL	CDS	528299	529615	.	-	0	ID=cds434;Parent=gene467;Dbxref=EnsemblGenomes-Gn:YE0454,EnsemblGenomes-Tr:CAL10579,GOA:A1JIY8,InterPro:IPR002293,InterPro:IPR004754,InterPro:IPR027566,UniProtKB/TrEMBL:A1JIY8,NCBI_GP:CAL10579.1;Name=CAL10579.1;gbkey=CDS;product=putative amino acid permease;protein_id=CAL10579.1;transl_table=11
AM286415.1	EMBL	sequence_feature	528308	529606	.	-	.	ID=id922;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -222.1%2C E-value 0.00023;gbkey=misc_feature;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	529523	529591	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	529442	529510	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	529289	529357	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	529193	529261	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	529106	529174	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	529004	529063	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	528875	528943	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	528749	528817	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	528590	528658	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	528494	528562	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	528404	528457	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	528332	528391	.	-	.	ID=id923;Note=12 probable transmembrane helices predicted for YE0454 by TMHMM2.0 at aa 9-31%2C 36-58%2C 87-109%2C 119-141%2C148-170%2C 185-204%2C 225-247%2C 267-289%2C 320-342%2C 352-374%2C387-404 and 409-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	529370	529393	.	-	.	ID=id924;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	529709	531874	.	-	.	ID=gene468;Name=speF;gbkey=Gene;gene=speF;gene_biotype=protein_coding;locus_tag=YE0455
AM286415.1	EMBL	CDS	529709	531874	.	-	0	ID=cds435;Parent=gene468;Dbxref=EnsemblGenomes-Gn:YE0455,EnsemblGenomes-Tr:CAL10580,GOA:A1JIY9,InterPro:IPR000310,InterPro:IPR005308,InterPro:IPR008286,InterPro:IPR011006,InterPro:IPR011193,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR027464,InterPro:IPR027568,UniProtKB/TrEMBL:A1JIY9,NCBI_GP:CAL10580.1;Name=CAL10580.1;Note=Similar to Escherichia coli ornithine decarboxylase%2C inducible SpeF or b0693 SWALL:DCOS_ECOLI (SWALL:P24169) (732 aa) fasta scores: E(): 0%2C 71.42 38d in 721 aa and to Yersinia pestis ornithine decarboxylase SpeC or Ypo0960 SWALL:Q8ZHE0 (EMBL:AJ414145) (720 aa) fasta scores: E(): 0%2C 76.32 38d in 718 aa;gbkey=CDS;gene=speF;inference=similar to sequence:UniProtKB:P24169;product=ornithine decarboxylase%2C inducible;protein_id=CAL10580.1;transl_table=11
AM286415.1	EMBL	sequence_feature	529748	530149	.	-	.	ID=id925;Note=Pfam match to entry PF03711 OKR_DC_1_C%2C Orn/Lys/Arg decarboxylase%2C C-terminal domain%2C score 254.6%2C E-value 8.8e-74;gbkey=misc_feature;gene=speF;inference=protein motif:PFAM:PF03711
AM286415.1	EMBL	sequence_feature	530171	531550	.	-	.	ID=id926;Note=Pfam match to entry PF01276 OKR_DC_1%2C Orn/Lys/Arg decarboxylase%2C major domain%2C score 1003.9%2C E-value 2.4e-299;gbkey=misc_feature;gene=speF;inference=protein motif:PFAM:PF01276
AM286415.1	EMBL	sequence_feature	530627	530650	.	-	.	ID=id927;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=speF;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	530783	530827	.	-	.	ID=id928;Note=PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site.;gbkey=misc_feature;gene=speF;inference=protein motif:Prosite:PS00703
AM286415.1	EMBL	sequence_feature	531470	531511	.	-	.	ID=id929;Note=PS00196 Type-1 copper (blue) proteins signature.;gbkey=misc_feature;gene=speF;inference=protein motif:Prosite:PS00196
AM286415.1	EMBL	sequence_feature	531566	531874	.	-	.	ID=id930;Note=Pfam match to entry PF03709 OKR_DC_1_N%2C Orn/Lys/Arg decarboxylase%2C N-terminal domain%2C score 117.6%2C E-value 1.5e-32;gbkey=misc_feature;gene=speF;inference=protein motif:PFAM:PF03709
AM286415.1	EMBL	gene	533021	535045	.	-	.	ID=gene469;Name=YE0458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0458
AM286415.1	EMBL	CDS	533021	535045	.	-	0	ID=cds436;Parent=gene469;Dbxref=EnsemblGenomes-Gn:YE0458,EnsemblGenomes-Tr:CAL10581,GOA:A1JIZ0,InterPro:IPR008397,InterPro:IPR008929,InterPro:IPR012480,UniProtKB/TrEMBL:A1JIZ0,NCBI_GP:CAL10581.1;Name=CAL10581.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10581.1;transl_table=11
AM286415.1	EMBL	gene	535068	536306	.	-	.	ID=gene470;Name=YE0459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0459
AM286415.1	EMBL	CDS	535068	536306	.	-	0	ID=cds437;Parent=gene470;Dbxref=EnsemblGenomes-Gn:YE0459,EnsemblGenomes-Tr:CAL10582,GOA:A1JIZ1,InterPro:IPR008397,InterPro:IPR008929,UniProtKB/TrEMBL:A1JIZ1,NCBI_GP:CAL10582.1;Name=CAL10582.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10582.1;transl_table=11
AM286415.1	EMBL	gene	536867	538180	.	+	.	ID=gene471;Name=YE0460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0460
AM286415.1	EMBL	CDS	536867	538180	.	+	0	ID=cds438;Parent=gene471;Dbxref=EnsemblGenomes-Gn:YE0460,EnsemblGenomes-Tr:CAL10583,GOA:A1JIZ2,InterPro:IPR006059,UniProtKB/TrEMBL:A1JIZ2,NCBI_GP:CAL10583.1;Name=CAL10583.1;gbkey=CDS;product=putative sugar binding protein;protein_id=CAL10583.1;transl_table=11
AM286415.1	EMBL	sequence_feature	536984	538111	.	+	.	ID=id931;Note=Pfam match to entry PF01547 SBP_bac_1%2C Bacterial extracellular solute-binding protein%2C score 174.5%2CE-value 1.2e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF01547
AM286415.1	EMBL	gene	538188	539072	.	+	.	ID=gene472;Name=YE0461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0461
AM286415.1	EMBL	CDS	538188	539072	.	+	0	ID=cds439;Parent=gene472;Dbxref=EnsemblGenomes-Gn:YE0461,EnsemblGenomes-Tr:CAL10584,GOA:A1JIZ3,InterPro:IPR000515,UniProtKB/TrEMBL:A1JIZ3,NCBI_GP:CAL10584.1;Name=CAL10584.1;gbkey=CDS;product=sugar transport system%2C permease protein;protein_id=CAL10584.1;transl_table=11
AM286415.1	EMBL	sequence_feature	538221	538289	.	+	.	ID=id932;Note=6 probable transmembrane helices predicted for YE0461 by TMHMM2.0 at aa 12-34%2C 74-96%2C 103-125%2C 164-186%2C206-228 and 265-287;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	538407	538475	.	+	.	ID=id932;Note=6 probable transmembrane helices predicted for YE0461 by TMHMM2.0 at aa 12-34%2C 74-96%2C 103-125%2C 164-186%2C206-228 and 265-287;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	538494	538562	.	+	.	ID=id932;Note=6 probable transmembrane helices predicted for YE0461 by TMHMM2.0 at aa 12-34%2C 74-96%2C 103-125%2C 164-186%2C206-228 and 265-287;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	538677	538745	.	+	.	ID=id932;Note=6 probable transmembrane helices predicted for YE0461 by TMHMM2.0 at aa 12-34%2C 74-96%2C 103-125%2C 164-186%2C206-228 and 265-287;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	538803	538871	.	+	.	ID=id932;Note=6 probable transmembrane helices predicted for YE0461 by TMHMM2.0 at aa 12-34%2C 74-96%2C 103-125%2C 164-186%2C206-228 and 265-287;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	538980	539048	.	+	.	ID=id932;Note=6 probable transmembrane helices predicted for YE0461 by TMHMM2.0 at aa 12-34%2C 74-96%2C 103-125%2C 164-186%2C206-228 and 265-287;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	538728	538949	.	+	.	ID=id933;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 49.9%2C E-value 3.6e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	539091	539930	.	+	.	ID=gene473;Name=YE0462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0462
AM286415.1	EMBL	CDS	539091	539930	.	+	0	ID=cds440;Parent=gene473;Dbxref=EnsemblGenomes-Gn:YE0462,EnsemblGenomes-Tr:CAL10585,GOA:A1JIZ4,InterPro:IPR000515,UniProtKB/TrEMBL:A1JIZ4,NCBI_GP:CAL10585.1;Name=CAL10585.1;gbkey=CDS;product=sugar transport system%2C permease protein;protein_id=CAL10585.1;transl_table=11
AM286415.1	EMBL	sequence_feature	539124	539192	.	+	.	ID=id934;Note=6 probable transmembrane helices predicted for YE0462 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 143-165%2C185-207 and 245-264;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	539304	539372	.	+	.	ID=id934;Note=6 probable transmembrane helices predicted for YE0462 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 143-165%2C185-207 and 245-264;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	539406	539474	.	+	.	ID=id934;Note=6 probable transmembrane helices predicted for YE0462 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 143-165%2C185-207 and 245-264;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	539517	539585	.	+	.	ID=id934;Note=6 probable transmembrane helices predicted for YE0462 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 143-165%2C185-207 and 245-264;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	539643	539711	.	+	.	ID=id934;Note=6 probable transmembrane helices predicted for YE0462 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 143-165%2C185-207 and 245-264;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	539823	539882	.	+	.	ID=id934;Note=6 probable transmembrane helices predicted for YE0462 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 143-165%2C185-207 and 245-264;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	539577	539801	.	+	.	ID=id935;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 70.5%2C E-value 2.4e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	539580	539666	.	+	.	ID=id936;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	539942	541057	.	+	.	ID=gene474;Name=YE0463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0463
AM286415.1	EMBL	CDS	539942	541057	.	+	0	ID=cds441;Parent=gene474;Dbxref=EnsemblGenomes-Gn:YE0463,EnsemblGenomes-Tr:CAL10586,GOA:A1JIZ5,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR012340,InterPro:IPR013611,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JIZ5,NCBI_GP:CAL10586.1;Name=CAL10586.1;gbkey=CDS;product=putative sugar ABC transporter%2C ATP-binding protein;protein_id=CAL10586.1;transl_table=11
AM286415.1	EMBL	sequence_feature	540026	540571	.	+	.	ID=id937;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 199.7%2C E-value 2.9e-57;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	540047	540070	.	+	.	ID=id938;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	540341	540385	.	+	.	ID=id939;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	540836	541012	.	+	.	ID=id940;Note=Pfam match to entry PF03459 TOBE%2C TOBE domain %2Cscore 33.3%2C E-value 3.6e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF03459
AM286415.1	EMBL	gene	541072	542238	.	+	.	ID=gene475;Name=YE0464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0464
AM286415.1	EMBL	CDS	541072	542238	.	+	0	ID=cds442;Parent=gene475;Dbxref=EnsemblGenomes-Gn:YE0464,EnsemblGenomes-Tr:CAL10587,GOA:A1JIZ6,InterPro:IPR008397,InterPro:IPR008929,UniProtKB/TrEMBL:A1JIZ6,NCBI_GP:CAL10587.1;Name=CAL10587.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10587.1;transl_table=11
AM286415.1	EMBL	gene	542336	542779	.	+	.	ID=gene476;Name=YE0465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0465
AM286415.1	EMBL	CDS	542336	542779	.	+	0	ID=cds443;Parent=gene476;Dbxref=EnsemblGenomes-Gn:YE0465,EnsemblGenomes-Tr:CAL10588,GOA:A1JIZ7,InterPro:IPR011194,InterPro:IPR012349,NCBI_GP:CAL10588.1;Name=CAL10588.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10588.1;transl_table=11
AM286415.1	EMBL	gene	543286	544275	.	+	.	ID=gene477;Name=YE0467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0467
AM286415.1	EMBL	CDS	543286	544275	.	+	0	ID=cds444;Parent=gene477;Dbxref=EnsemblGenomes-Gn:YE0467,EnsemblGenomes-Tr:CAL10589,UniProtKB/TrEMBL:A1JIZ8,NCBI_GP:CAL10589.1;Name=CAL10589.1;Note=Weakly similar to Lactococcus lactis GntR family transcriptional regulator BusR or ll1453 SWALL:Q9CFL6 (EMBL:AE006375) (206 aa) fasta scores: E(): 8.5%2C 25 38d in 184 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE006375;product=hypothetical protein;protein_id=CAL10589.1;transl_table=11
AM286415.1	EMBL	gene	544967	545596	.	+	.	ID=gene478;Name=YE0468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0468
AM286415.1	EMBL	CDS	544967	545596	.	+	0	ID=cds445;Parent=gene478;Dbxref=EnsemblGenomes-Gn:YE0468,EnsemblGenomes-Tr:CAL10590,InterPro:IPR016040,UniProtKB/TrEMBL:A1JIZ9,NCBI_GP:CAL10590.1;Name=CAL10590.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10590.1;transl_table=11
AM286415.1	EMBL	sequence_feature	544967	545029	.	+	.	ID=id941;Note=Pfam match to entry PF01118 Semialdhyde_dh%2CSemialdehyde dehydrogenase%2C NAD binding domain%2C score 19.3%2C E-value 2.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01118
AM286415.1	EMBL	gene	545597	546364	.	-	.	ID=gene479;Name=phnP;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=YE0469
AM286415.1	EMBL	CDS	545597	546364	.	-	0	ID=cds446;Parent=gene479;Dbxref=EnsemblGenomes-Gn:YE0469,EnsemblGenomes-Tr:CAL10591,GOA:A1JJ00,InterPro:IPR001279,InterPro:IPR017693,UniProtKB/TrEMBL:A1JJ00,NCBI_GP:CAL10591.1;Name=CAL10591.1;gbkey=CDS;gene=phnP;product=PhnP protein;protein_id=CAL10591.1;transl_table=11
AM286415.1	EMBL	sequence_feature	546116	546271	.	-	.	ID=id942;Note=Pfam match to entry PF00753 lactamase_B%2CMetallo-beta-lactamase superfamily%2C score 14.0%2C E-value 0.0003;gbkey=misc_feature;gene=phnP;inference=protein motif:PFAM:PF00753
AM286415.1	EMBL	gene	546355	546933	.	-	.	ID=gene480;Name=phnN;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=YE0470
AM286415.1	EMBL	CDS	546355	546933	.	-	0	ID=cds447;Parent=gene480;Dbxref=EnsemblGenomes-Gn:YE0470,EnsemblGenomes-Tr:CAL10592,GOA:A1JJ01,InterPro:IPR008144,InterPro:IPR008145,InterPro:IPR012699,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJ01,NCBI_GP:CAL10592.1;Name=CAL10592.1;gbkey=CDS;gene=phnN;product=PhnN protein;protein_id=CAL10592.1;transl_table=11
AM286415.1	EMBL	sequence_feature	546859	546900	.	-	.	ID=id943;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=phnN;inference=protein motif:Prosite:PS00105
AM286415.1	EMBL	gene	546933	548081	.	-	.	ID=gene481;Name=phnM;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=YE0471
AM286415.1	EMBL	CDS	546933	548081	.	-	0	ID=cds448;Parent=gene481;Dbxref=EnsemblGenomes-Gn:YE0471,EnsemblGenomes-Tr:CAL10593,GOA:A1JJ02,InterPro:IPR011059,InterPro:IPR012696,UniProtKB/TrEMBL:A1JJ02,NCBI_GP:CAL10593.1;Name=CAL10593.1;gbkey=CDS;gene=phnM;product=PhnM protein;protein_id=CAL10593.1;transl_table=11
AM286415.1	EMBL	sequence_feature	547011	547118	.	-	.	ID=id944;Note=Pfam match to entry PF01685 ATZ_TRZ%2CChlorohydrolase%2C score 25.7%2C E-value 8.7e-08;gbkey=misc_feature;gene=phnM;inference=protein motif:PFAM:PF01685
AM286415.1	EMBL	gene	548078	548752	.	-	.	ID=gene482;Name=phnL;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=YE0472
AM286415.1	EMBL	CDS	548078	548752	.	-	0	ID=cds449;Parent=gene482;Dbxref=EnsemblGenomes-Gn:YE0472,EnsemblGenomes-Tr:CAL10594,GOA:A1JJ03,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR012701,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJ03,NCBI_GP:CAL10594.1;Name=CAL10594.1;gbkey=CDS;gene=phnL;product=phosphonates transport ATP-binding protein;protein_id=CAL10594.1;transl_table=11
AM286415.1	EMBL	sequence_feature	548111	548686	.	-	.	ID=id945;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 181.7%2C E-value 8e-52;gbkey=misc_feature;gene=phnL;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	548294	548338	.	-	.	ID=id946;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=phnL;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	548642	548665	.	-	.	ID=id947;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=phnL;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	548826	549614	.	-	.	ID=gene483;Name=phnK;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=YE0473
AM286415.1	EMBL	CDS	548826	549614	.	-	0	ID=cds450;Parent=gene483;Dbxref=EnsemblGenomes-Gn:YE0473,EnsemblGenomes-Tr:CAL10595,GOA:A1JJ04,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR012700,InterPro:IPR013563,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJ04,NCBI_GP:CAL10595.1;Name=CAL10595.1;gbkey=CDS;gene=phnK;product=phosphonates transport ATP-binding protein;protein_id=CAL10595.1;transl_table=11
AM286415.1	EMBL	sequence_feature	548919	549509	.	-	.	ID=id948;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 201.5%2C E-value 8.7e-58;gbkey=misc_feature;gene=phnK;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	549105	549149	.	-	.	ID=id949;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=phnK;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	549465	549488	.	-	.	ID=id950;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=phnK;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	549629	550495	.	-	.	ID=gene484;Name=phnJ;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=YE0474
AM286415.1	EMBL	CDS	549629	550495	.	-	0	ID=cds451;Parent=gene484;Dbxref=EnsemblGenomes-Gn:YE0474,EnsemblGenomes-Tr:CAL10596,GOA:A1JJ05,InterPro:IPR010306,UniProtKB/TrEMBL:A1JJ05,NCBI_GP:CAL10596.1;Name=CAL10596.1;gbkey=CDS;gene=phnJ;product=PhnJ protein;protein_id=CAL10596.1;transl_table=11
AM286415.1	EMBL	gene	550488	551600	.	-	.	ID=gene485;Name=phnI;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=YE0475
AM286415.1	EMBL	CDS	550488	551600	.	-	0	ID=cds452;Parent=gene485;Dbxref=EnsemblGenomes-Gn:YE0475,EnsemblGenomes-Tr:CAL10597,GOA:A1JJ06,InterPro:IPR008773,UniProtKB/TrEMBL:A1JJ06,NCBI_GP:CAL10597.1;Name=CAL10597.1;gbkey=CDS;gene=phnI;product=PhnI protein;protein_id=CAL10597.1;transl_table=11
AM286415.1	EMBL	gene	551600	552181	.	-	.	ID=gene486;Name=phnH;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=YE0476
AM286415.1	EMBL	CDS	551600	552181	.	-	0	ID=cds453;Parent=gene486;Dbxref=EnsemblGenomes-Gn:YE0476,EnsemblGenomes-Tr:CAL10598,GOA:A1JJ07,InterPro:IPR008772,UniProtKB/TrEMBL:A1JJ07,NCBI_GP:CAL10598.1;Name=CAL10598.1;Note=Similar to Escherichia coli PhnH protein involved in phosphonate usage%2C b4100 SWALL:PHNH_ECOLI (SWALL:P16686) (194 aa) fasta scores: E(): 1.4e-38%2C 54.12 id in 194 aa%2C and to Yersinia pestis PhnH protein or ypo3458 SWALL:Q8ZBF8 (EMBL:AJ414157) (208 aa) fasta scores: E(): 1.3e-40%2C 63.46 38d in 208 aa;gbkey=CDS;gene=phnH;inference=similar to sequence:UniProtKB:P16686;product=PhnH protein;protein_id=CAL10598.1;transl_table=11
AM286415.1	EMBL	gene	552181	552657	.	-	.	ID=gene487;Name=phnG;gbkey=Gene;gene=phnG;gene_biotype=protein_coding;locus_tag=YE0477
AM286415.1	EMBL	CDS	552181	552657	.	-	0	ID=cds454;Parent=gene487;Dbxref=EnsemblGenomes-Gn:YE0477,EnsemblGenomes-Tr:CAL10599,GOA:A1JJ08,InterPro:IPR009609,UniProtKB/TrEMBL:A1JJ08,NCBI_GP:CAL10599.1;Name=CAL10599.1;gbkey=CDS;gene=phnG;product=PhnG protein;protein_id=CAL10599.1;transl_table=11
AM286415.1	EMBL	gene	552658	553383	.	-	.	ID=gene488;Name=phnF;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=YE0478
AM286415.1	EMBL	CDS	552658	553383	.	-	0	ID=cds455;Parent=gene488;Dbxref=EnsemblGenomes-Gn:YE0478,EnsemblGenomes-Tr:CAL10600,GOA:A1JJ09,InterPro:IPR000524,InterPro:IPR011663,InterPro:IPR011991,InterPro:IPR012702,InterPro:IPR028978,UniProtKB/TrEMBL:A1JJ09,NCBI_GP:CAL10600.1;Name=CAL10600.1;gbkey=CDS;gene=phnF;product=probable gntR-family transcriptional regulatory protein;protein_id=CAL10600.1;transl_table=11
AM286415.1	EMBL	sequence_feature	553159	553335	.	-	.	ID=id951;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 85.7%2C E-value 5.9e-23;gbkey=misc_feature;gene=phnF;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	sequence_feature	553207	553281	.	-	.	ID=id952;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=misc_feature;gene=phnF;inference=protein motif:Prosite:PS00043
AM286415.1	EMBL	sequence_feature	553213	553278	.	-	.	ID=id953;Note=Predicted helix-turn-helix motif with score 1189.000%2C SD 3.24 at aa 36-57%2C sequence PSEQQLAERYQVNRHTLRRAVD;gbkey=misc_feature;gene=phnF
AM286415.1	EMBL	gene	553768	554871	.	+	.	ID=gene489;Name=YE0479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0479
AM286415.1	EMBL	CDS	553768	554871	.	+	0	ID=cds456;Parent=gene489;Dbxref=EnsemblGenomes-Gn:YE0479,EnsemblGenomes-Tr:CAL10601,UniProtKB/TrEMBL:A1JJ10,NCBI_GP:CAL10601.1;Name=CAL10601.1;Note=Similar to many proteins which are rich in Glycine: Ralstonia solanacearum putative hemagglutinin-related transmembrane protein Rsp1094 SWALL:Q8XQX4 (EMBL:AL646082) (459 aa) fasta scores: E(): 1.3e-22%2C 35.71 38d in 392 aa and to Ralstonia solanacearum putative lipoprotein Rsp0116 or rs03006 SWALL:Q8XTJ2 (EMBL:AL646076) (427 aa) fasta scores: E(): 2e-21%2C 38.43 38d in 346 aa and to Arabidopsis thaliana putative glycine-rich protein f7k2.60 or at4g22480 SWALL:Q9SUX1 (EMBL:AL033545) (608 aa) fasta scores: E(): 4.8e-07%2C 31.56 38d in 377 aa. Note the high Glycine content of the predicted product of this CDS;gbkey=CDS;inference=similar to sequence:INSDC:AL646082;product=putative lipoprotein;protein_id=CAL10601.1;transl_table=11
AM286415.1	EMBL	sequence_feature	553810	553842	.	+	.	ID=id954;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	555105	556841	.	+	.	ID=gene490;Name=YE0480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0480
AM286415.1	EMBL	CDS	555105	556841	.	+	0	ID=cds457;Parent=gene490;Dbxref=EnsemblGenomes-Gn:YE0480,EnsemblGenomes-Tr:CAL10602,InterPro:IPR013686,UniProtKB/TrEMBL:A1JJ11,NCBI_GP:CAL10602.1;Name=CAL10602.1;Note=Similar to Haemophilus influenzae heme/hemopexin utilization protein B precursor HxuB or hi0263 SWALL:HXB1_HAEIN (SWALL:P44601) (565 aa) fasta scores: E(): 9.8e-06%2C 17.76 38d in 563 aa and to Ralstonia solanacearum probable activation/secretion signal peptide protein Rsp1095 or rs02601 SWALL:Q8XQX3 (EMBL:AL646082) (557 aa) fasta scores: E(): 5.6e-24%2C 31.85 38d in 565 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P44601;product=exported protein;protein_id=CAL10602.1;transl_table=11
AM286415.1	EMBL	gene	556986	557360	.	-	.	ID=gene491;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=YE0481
AM286415.1	EMBL	CDS	556986	557360	.	-	0	ID=cds458;Parent=gene491;Dbxref=EnsemblGenomes-Gn:YE0481,EnsemblGenomes-Tr:CAL10603,GOA:A1JJ12,InterPro:IPR012837,UniProtKB/TrEMBL:A1JJ12,NCBI_GP:CAL10603.1;Name=CAL10603.1;gbkey=CDS;gene=nrdG;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=CAL10603.1;transl_table=11
AM286415.1	EMBL	gene	557696	559834	.	-	.	ID=gene492;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=YE0482
AM286415.1	EMBL	CDS	557696	559834	.	-	0	ID=cds459;Parent=gene492;Dbxref=EnsemblGenomes-Gn:YE0482,EnsemblGenomes-Tr:CAL10604,GOA:A1JJ13,InterPro:IPR001150,InterPro:IPR005144,InterPro:IPR012833,InterPro:IPR019777,UniProtKB/TrEMBL:A1JJ13,NCBI_GP:CAL10604.1;Name=CAL10604.1;gbkey=CDS;gene=nrdD;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=CAL10604.1;transl_table=11
AM286415.1	EMBL	sequence_feature	557765	558094	.	-	.	ID=id955;Note=Pfam match to entry PF01228 Gly_radical%2C Glycine radical%2C score 187.4%2C E-value 1.5e-53;gbkey=misc_feature;gene=nrdD;inference=protein motif:PFAM:PF01228
AM286415.1	EMBL	sequence_feature	557783	557809	.	-	.	ID=id956;Note=PS00850 Glycine radical signature.;gbkey=misc_feature;gene=nrdD;inference=protein motif:Prosite:PS00850
AM286415.1	EMBL	sequence_feature	559559	559828	.	-	.	ID=id957;Note=Pfam match to entry PF03477 ATP-cone%2C ATP cone domain%2C score 93.9%2C E-value 2e-25;gbkey=misc_feature;gene=nrdD;inference=protein motif:PFAM:PF03477
AM286415.1	EMBL	gene	560118	561026	.	-	.	ID=gene493;Name=YE0483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0483
AM286415.1	EMBL	CDS	560118	561026	.	-	0	ID=cds460;Parent=gene493;Dbxref=EnsemblGenomes-Gn:YE0483,EnsemblGenomes-Tr:CAL10605,GOA:A1JJ14,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJ14,NCBI_GP:CAL10605.1;Name=CAL10605.1;Note=Similar to many proposed transcriptional regulatory proteins including: Pseudomonas aeruginosa probable transcriptional regulator Pa0181 SWALL:Q9I6V1 (EMBL:AE004456) (310 aa) fasta scores: E(): 6.8e-32%2C37.28 38d in 287 aa and Rhizobium meliloti putative LysR-family transcriptional regulator Ra0890 or Sma1632 SWALL:Q92YJ0 (EMBL:AE007275) (317 aa) fasta scores: E(): 6.8e-28%2C 32.3 38d in 291 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE007275;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL10605.1;transl_table=11
AM286415.1	EMBL	sequence_feature	560133	560756	.	-	.	ID=id958;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 180.4%2C E-value 1.9e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	560826	561005	.	-	.	ID=id959;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 61.8%2C E-value 9.7e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	560871	560963	.	-	.	ID=id960;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	560901	560966	.	-	.	ID=id961;Note=Predicted helix-turn-helix motif with score 1574.000%2C SD 4.55 at aa 21-42%2C sequence ENFSVAARQLGVTPAAISKNVR;gbkey=misc_feature
AM286415.1	EMBL	gene	561129	561653	.	+	.	ID=gene494;Name=YE0484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0484
AM286415.1	EMBL	CDS	561129	561653	.	+	0	ID=cds461;Parent=gene494;Dbxref=EnsemblGenomes-Gn:YE0484,EnsemblGenomes-Tr:CAL10606,InterPro:IPR003680,InterPro:IPR029039,UniProtKB/TrEMBL:A1JJ15,NCBI_GP:CAL10606.1;Name=CAL10606.1;Note=Similar to Bacillus subtilis general stress protein 14 YwrO SWALL:GS14_BACSU (SWALL:P80871) (175 aa) fasta scores: E(): 2.3e-26%2C 46.83 38d in 158 aa%2C Bacillus subtilis putative NAD(P)H oxidoreductase YrkL SWALL:YRKL_BACSU (SWALL:P54439) (174 aa) fasta scores: E(): 5e-23%2C 39.41 38d in 170 aa%2C and to Escherichia coli%2Cand Escherichia coli O157:H7 putative NAD(P)H oxidoreductase YheR or b3351 or z4712 or ecs4202 SWALL:YHER_ECOLI (SWALL:P45534) (184 aa) fasta scores: E(): 1.3e-21%2C 42.33 38d in 163 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P80871;product=putative oxidoreductase;protein_id=CAL10606.1;transl_table=11
AM286415.1	EMBL	sequence_feature	561132	561644	.	+	.	ID=id962;Note=Pfam match to entry PF02525 Flavodoxin_2%2CFlavodoxin-like fold%2C score 159.7%2C E-value 3.2e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF02525
AM286415.1	EMBL	gene	561756	562025	.	+	.	ID=gene495;Name=YE0485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0485
AM286415.1	EMBL	CDS	561756	562025	.	+	0	ID=cds462;Parent=gene495;Dbxref=EnsemblGenomes-Gn:YE0485,EnsemblGenomes-Tr:CAL10607,UniProtKB/TrEMBL:A1JJ18,NCBI_GP:CAL10607.1;Name=CAL10607.1;Note=Similar to Erwinia amylovora hypothetical 10.0 kDa protein SWALL:Q9ETK7 (EMBL:AF264950) (89 aa) fasta scores: E(): 1.3e-17%2C 60.67 38d in 89 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF264950;product=conserved hypothetical protein;protein_id=CAL10607.1;transl_table=11
AM286415.1	EMBL	gene	562119	562376	.	+	.	ID=gene496;Name=YE0486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0486
AM286415.1	EMBL	CDS	562119	562376	.	+	0	ID=cds463;Parent=gene496;Dbxref=EnsemblGenomes-Gn:YE0486,EnsemblGenomes-Tr:CAL10608,UniProtKB/TrEMBL:A1JJ19,NCBI_GP:CAL10608.1;Name=CAL10608.1;Note=Similar in parts to Erwinia amylovora hypothetical protein SWALL:Q9ETQ1 (EMBL:AF264950) (71 aa) fasta scores: E(): 2.6e-14%2C 56.33 38d in 71 aa and to Yersinia pestis hypothetical protein Y1074 or ypmt1.69 SWALL:Q9ZGZ3 (EMBL:AF074611) (108 aa) fasta scores: E(): 8.8%2C 33.33 38d in 42 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF264950;product=conserved hypothetical protein;protein_id=CAL10608.1;transl_table=11
AM286415.1	EMBL	gene	562432	563148	.	-	.	ID=gene497;Name=YE0487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0487
AM286415.1	EMBL	CDS	562432	563148	.	-	0	ID=cds464;Parent=gene497;Dbxref=EnsemblGenomes-Gn:YE0487,EnsemblGenomes-Tr:CAL10609,GOA:A1JJ20,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJ20,NCBI_GP:CAL10609.1;Name=CAL10609.1;Note=Similar to Yersinia pestis putative ABC transporter%2C ATP-binding protein Ypo3453 SWALL:Q8ZBG3 (EMBL:AJ414157) (233 aa) fasta scores: E(): 3.4e-69%2C 89.7 id in 233 aa and Agrobacterium tumefaciens ABC transporter%2C nucleotide binding/ATPase protein dppf or atu4620 or agr_l_526 SWALL:Q8U736 (EMBL:AE009390) (245 aa) fasta scores: E(): 2.7e-36%2C 51.28 38d in 234 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414157;product=putative ABC transporter%2C ATP-binding protein;protein_id=CAL10609.1;transl_table=11
AM286415.1	EMBL	sequence_feature	562492	562992	.	-	.	ID=id963;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 140.1%2C E-value 2.5e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	562678	562722	.	-	.	ID=id964;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	563135	564013	.	-	.	ID=gene498;Name=YE0488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0488
AM286415.1	EMBL	CDS	563135	564013	.	-	0	ID=cds465;Parent=gene498;Dbxref=EnsemblGenomes-Gn:YE0488,EnsemblGenomes-Tr:CAL10610,GOA:A1JJ21,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJ21,NCBI_GP:CAL10610.1;Name=CAL10610.1;gbkey=CDS;product=putative ABC transporter transporter%2CATP-binding protein;protein_id=CAL10610.1;transl_table=11
AM286415.1	EMBL	sequence_feature	563297	563926	.	-	.	ID=id965;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 186.4%2C E-value 2.9e-53;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	563618	563641	.	-	.	ID=id966;Note=PS00881 Protein splicing signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00881
AM286415.1	EMBL	sequence_feature	563882	563905	.	-	.	ID=id967;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	564006	564839	.	-	.	ID=gene499;Name=YE0489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0489
AM286415.1	EMBL	CDS	564006	564839	.	-	0	ID=cds466;Parent=gene499;Dbxref=EnsemblGenomes-Gn:YE0489,EnsemblGenomes-Tr:CAL10611,GOA:A1JJ22,InterPro:IPR000515,InterPro:IPR025966,UniProtKB/TrEMBL:A1JJ22,NCBI_GP:CAL10611.1;Name=CAL10611.1;gbkey=CDS;product=putative transporter%2C permease protein;protein_id=CAL10611.1;transl_table=11
AM286415.1	EMBL	sequence_feature	564735	564803	.	-	.	ID=id968;Note=5 probable transmembrane helices predicted for YE0489 by TMHMM2.0 at aa 13-35%2C 82-104%2C 125-147%2C 200-222 and 243-265;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	564528	564596	.	-	.	ID=id968;Note=5 probable transmembrane helices predicted for YE0489 by TMHMM2.0 at aa 13-35%2C 82-104%2C 125-147%2C 200-222 and 243-265;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	564399	564467	.	-	.	ID=id968;Note=5 probable transmembrane helices predicted for YE0489 by TMHMM2.0 at aa 13-35%2C 82-104%2C 125-147%2C 200-222 and 243-265;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	564174	564242	.	-	.	ID=id968;Note=5 probable transmembrane helices predicted for YE0489 by TMHMM2.0 at aa 13-35%2C 82-104%2C 125-147%2C 200-222 and 243-265;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	564045	564113	.	-	.	ID=id968;Note=5 probable transmembrane helices predicted for YE0489 by TMHMM2.0 at aa 13-35%2C 82-104%2C 125-147%2C 200-222 and 243-265;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	564126	564356	.	-	.	ID=id969;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 25.8%2C E-value 6.6e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	564841	565890	.	-	.	ID=gene500;Name=YE0490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0490
AM286415.1	EMBL	CDS	564841	565890	.	-	0	ID=cds467;Parent=gene500;Dbxref=EnsemblGenomes-Gn:YE0490,EnsemblGenomes-Tr:CAL10612,GOA:A1JJ23,InterPro:IPR000515,UniProtKB/TrEMBL:A1JJ23,NCBI_GP:CAL10612.1;Name=CAL10612.1;gbkey=CDS;product=putative transporter%2C permease protein;protein_id=CAL10612.1;transl_table=11
AM286415.1	EMBL	sequence_feature	565765	565833	.	-	.	ID=id970;Note=6 probable transmembrane helices predicted for YE0490 by TMHMM2.0 at aa 20-42%2C 114-136%2C 149-171%2C 208-230%2C263-285 and 311-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	565483	565551	.	-	.	ID=id970;Note=6 probable transmembrane helices predicted for YE0490 by TMHMM2.0 at aa 20-42%2C 114-136%2C 149-171%2C 208-230%2C263-285 and 311-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	565378	565446	.	-	.	ID=id970;Note=6 probable transmembrane helices predicted for YE0490 by TMHMM2.0 at aa 20-42%2C 114-136%2C 149-171%2C 208-230%2C263-285 and 311-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	565201	565269	.	-	.	ID=id970;Note=6 probable transmembrane helices predicted for YE0490 by TMHMM2.0 at aa 20-42%2C 114-136%2C 149-171%2C 208-230%2C263-285 and 311-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	565036	565104	.	-	.	ID=id970;Note=6 probable transmembrane helices predicted for YE0490 by TMHMM2.0 at aa 20-42%2C 114-136%2C 149-171%2C 208-230%2C263-285 and 311-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	564892	564960	.	-	.	ID=id970;Note=6 probable transmembrane helices predicted for YE0490 by TMHMM2.0 at aa 20-42%2C 114-136%2C 149-171%2C 208-230%2C263-285 and 311-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	564937	565170	.	-	.	ID=id971;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 49.4%2C E-value 5.1e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	566062	567630	.	-	.	ID=gene501;Name=YE0491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0491
AM286415.1	EMBL	CDS	566062	567630	.	-	0	ID=cds468;Parent=gene501;Dbxref=EnsemblGenomes-Gn:YE0491,EnsemblGenomes-Tr:CAL10613,GOA:A1JJ24,InterPro:IPR000914,UniProtKB/TrEMBL:A1JJ24,NCBI_GP:CAL10613.1;Name=CAL10613.1;Note=Similar to many putative ABC transport proteins including: Agrobacterium tumefaciens ABC transporter%2Csubstrate binding protein DppA or atu2518 or agr_c_4574 SWALL:Q8UCG9 (EMBL:AE009198) (570 aa) fasta scores: E(): 2.7e-66%2C 38.78 38d in 508 aa and Rhizobium meliloti putative dipeptide binding periplasmic protein DppA2 or r02413 or smc01525 SWALL:Q92N26 (EMBL:AL591790) (546 aa) fasta scores: E(): 1.9e-45%2C 41.07 38d in 521 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591790;product=ABC transporter%2C substrate binding protein;protein_id=CAL10613.1;transl_table=11
AM286415.1	EMBL	sequence_feature	566065	567618	.	-	.	ID=id972;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 75.6%2C E-value 6.8e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	gene	567965	568423	.	+	.	ID=gene502;Name=YE0492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0492
AM286415.1	EMBL	CDS	567965	568423	.	+	0	ID=cds469;Parent=gene502;Dbxref=EnsemblGenomes-Gn:YE0492,EnsemblGenomes-Tr:CAL10614,InterPro:IPR004375,UniProtKB/TrEMBL:A1JJ25,NCBI_GP:CAL10614.1;Name=CAL10614.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10614.1;transl_table=11
AM286415.1	EMBL	signal_peptide	568642	568713	.	-	.	ID=id973;Note=Signal peptide predicted for YE0493 by SignalP 2.0 HMM (Signal peptide probabilty 0.846) with cleavage site probability 0.840 between residues 24 and 25;gbkey=sig_peptide
AM286415.1	EMBL	gene	568754	569761	.	-	.	ID=gene503;Name=argI;gbkey=Gene;gene=argI;gene_biotype=protein_coding;locus_tag=YE0494
AM286415.1	EMBL	CDS	568754	569761	.	-	0	ID=cds470;Parent=gene503;Dbxref=EnsemblGenomes-Gn:YE0494,EnsemblGenomes-Tr:CAL10615,GOA:A1JJ26,InterPro:IPR002292,InterPro:IPR006130,InterPro:IPR006131,InterPro:IPR006132,InterPro:IPR024904,UniProtKB/TrEMBL:A1JJ26,NCBI_GP:CAL10615.1;Name=CAL10615.1;gbkey=CDS;gene=argI;product=ornithine carbamoyltransferase chain I;protein_id=CAL10615.1;transl_table=11
AM286415.1	EMBL	sequence_feature	568766	569302	.	-	.	ID=id974;Note=Pfam match to entry PF00185 OTCace%2CAspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain%2C score 332.2%2C E-value 3.7e-97;gbkey=misc_feature;gene=argI;inference=protein motif:PFAM:PF00185
AM286415.1	EMBL	sequence_feature	569315	569743	.	-	.	ID=id975;Note=Pfam match to entry PF02729 OTCace_N%2CAspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%2C score 288.8%2C E-value 4.4e-84;gbkey=misc_feature;gene=argI;inference=protein motif:PFAM:PF02729
AM286415.1	EMBL	sequence_feature	569585	569608	.	-	.	ID=id976;Note=PS00097 Aspartate and ornithine carbamoyltransferases signature.;gbkey=misc_feature;gene=argI;inference=protein motif:Prosite:PS00097
AM286415.1	EMBL	gene	569932	570363	.	+	.	ID=gene504;Name=YE0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0495
AM286415.1	EMBL	CDS	569932	570363	.	+	0	ID=cds471;Parent=gene504;Dbxref=EnsemblGenomes-Gn:YE0495,EnsemblGenomes-Tr:CAL10616,GOA:A1JJ27,InterPro:IPR009671,InterPro:IPR016716,UniProtKB/TrEMBL:A1JJ27,NCBI_GP:CAL10616.1;Name=CAL10616.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10616.1;transl_table=11
AM286415.1	EMBL	gene	570858	571361	.	-	.	ID=gene505;Name=YE0497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0497
AM286415.1	EMBL	CDS	570858	571361	.	-	0	ID=cds472;Parent=gene505;Dbxref=EnsemblGenomes-Gn:YE0497,EnsemblGenomes-Tr:CAL10617,GOA:A1JJ28,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JJ28,NCBI_GP:CAL10617.1;Name=CAL10617.1;gbkey=CDS;product=putative acetyltransferase;protein_id=CAL10617.1;transl_table=11
AM286415.1	EMBL	sequence_feature	570927	571175	.	-	.	ID=id977;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 75.8%2C E-value 5.7e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	571621	574518	.	-	.	ID=gene506;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=YE0498
AM286415.1	EMBL	CDS	571621	574518	.	-	0	ID=cds473;Parent=gene506;Dbxref=EnsemblGenomes-Gn:YE0498,EnsemblGenomes-Tr:CAL10618,GOA:A1JJ29,InterPro:IPR001412,InterPro:IPR002300,InterPro:IPR002303,InterPro:IPR009008,InterPro:IPR009080,InterPro:IPR010978,InterPro:IPR013155,InterPro:IPR014729,InterPro:IPR019499,UniProtKB/TrEMBL:A1JJ29,NCBI_GP:CAL10618.1;Name=CAL10618.1;gbkey=CDS;gene=valS;product=valyl-tRNA synthetase;protein_id=CAL10618.1;transl_table=11
AM286415.1	EMBL	sequence_feature	572584	574440	.	-	.	ID=id978;Note=Pfam match to entry PF00133 tRNA-synt_1%2C tRNA synthetases class I (I%2C L%2C M and V)%2C score 1129.9%2CE-value 0;gbkey=misc_feature;gene=valS;inference=protein motif:PFAM:PF00133
AM286415.1	EMBL	sequence_feature	574318	574353	.	-	.	ID=id979;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=valS;inference=protein motif:Prosite:PS00178
AM286415.1	EMBL	gene	574532	574981	.	-	.	ID=gene507;Name=holC;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=YE0499
AM286415.1	EMBL	CDS	574532	574981	.	-	0	ID=cds474;Parent=gene507;Dbxref=EnsemblGenomes-Gn:YE0499,EnsemblGenomes-Tr:CAL10619,GOA:A1JJ30,InterPro:IPR007459,UniProtKB/TrEMBL:A1JJ30,NCBI_GP:CAL10619.1;Name=CAL10619.1;gbkey=CDS;gene=holC;product=DNA polymerase III%2C chi subunit;protein_id=CAL10619.1;transl_table=11
AM286415.1	EMBL	gene	575141	576652	.	-	.	ID=gene508;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;gene_synonym=carP,xerB;locus_tag=YE0500
AM286415.1	EMBL	CDS	575141	576652	.	-	0	ID=cds475;Parent=gene508;Dbxref=EnsemblGenomes-Gn:YE0500,EnsemblGenomes-Tr:CAL10620,GOA:A1JJ31,InterPro:IPR000819,InterPro:IPR008283,InterPro:IPR011356,InterPro:IPR023042,NCBI_GP:CAL10620.1;Name=CAL10620.1;gbkey=CDS;gene=pepA;product=cytosol aminopeptidase;protein_id=CAL10620.1;transl_table=11
AM286415.1	EMBL	sequence_feature	575180	576103	.	-	.	ID=id980;Note=Pfam match to entry PF00883 Peptidase_M17%2C Cytosol aminopeptidase family%2C catalytic domain%2C score 678.5%2CE-value 2.2e-201;gbkey=misc_feature;gene=pepA;inference=protein motif:PFAM:PF00883
AM286415.1	EMBL	sequence_feature	575582	575605	.	-	.	ID=id981;Note=PS00631 Cytosol aminopeptidase signature.;gbkey=misc_feature;gene=pepA;inference=protein motif:Prosite:PS00631
AM286415.1	EMBL	sequence_feature	575684	575716	.	-	.	ID=id982;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pepA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	576212	576610	.	-	.	ID=id983;Note=Pfam match to entry PF02789 Peptidase_M17_N%2CCytosol aminopeptidase family%2C N-terminal domain%2C score 176.7%2C E-value 2.5e-50;gbkey=misc_feature;gene=pepA;inference=protein motif:PFAM:PF02789
AM286415.1	EMBL	gene	576932	578026	.	+	.	ID=gene509;Name=YE0501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0501
AM286415.1	EMBL	CDS	576932	578026	.	+	0	ID=cds476;Parent=gene509;Dbxref=EnsemblGenomes-Gn:YE0501,EnsemblGenomes-Tr:CAL10621,GOA:A1JJ32,InterPro:IPR005495,UniProtKB/TrEMBL:A1JJ32,NCBI_GP:CAL10621.1;Name=CAL10621.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10621.1;transl_table=11
AM286415.1	EMBL	sequence_feature	576944	577993	.	+	.	ID=id984;Note=Pfam match to entry PF03739 YjgP_YjgQ%2C Predicted permease YjgP/YjgQ family%2C score 292.0%2C E-value 4.7e-85;gbkey=misc_feature;inference=protein motif:PFAM:PF03739
AM286415.1	EMBL	sequence_feature	576980	577048	.	+	.	ID=id985;Note=6 probable transmembrane helices predicted for YE0501 by TMHMM2.0 at aa 17-39%2C 54-76%2C 97-119%2C 267-289%2C296-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	577091	577159	.	+	.	ID=id985;Note=6 probable transmembrane helices predicted for YE0501 by TMHMM2.0 at aa 17-39%2C 54-76%2C 97-119%2C 267-289%2C296-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	577220	577288	.	+	.	ID=id985;Note=6 probable transmembrane helices predicted for YE0501 by TMHMM2.0 at aa 17-39%2C 54-76%2C 97-119%2C 267-289%2C296-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	577730	577798	.	+	.	ID=id985;Note=6 probable transmembrane helices predicted for YE0501 by TMHMM2.0 at aa 17-39%2C 54-76%2C 97-119%2C 267-289%2C296-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	577817	577873	.	+	.	ID=id985;Note=6 probable transmembrane helices predicted for YE0501 by TMHMM2.0 at aa 17-39%2C 54-76%2C 97-119%2C 267-289%2C296-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	577916	577984	.	+	.	ID=id985;Note=6 probable transmembrane helices predicted for YE0501 by TMHMM2.0 at aa 17-39%2C 54-76%2C 97-119%2C 267-289%2C296-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	578026	579096	.	+	.	ID=gene510;Name=YE0502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0502
AM286415.1	EMBL	CDS	578026	579096	.	+	0	ID=cds477;Parent=gene510;Dbxref=EnsemblGenomes-Gn:YE0502,EnsemblGenomes-Tr:CAL10622,GOA:A1JJ33,InterPro:IPR005495,UniProtKB/TrEMBL:A1JJ33,NCBI_GP:CAL10622.1;Name=CAL10622.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10622.1;transl_table=11
AM286415.1	EMBL	sequence_feature	578044	579087	.	+	.	ID=id986;Note=Pfam match to entry PF03739 YjgP_YjgQ%2C Predicted permease YjgP/YjgQ family%2C score 317.0%2C E-value 1.5e-92;gbkey=misc_feature;inference=protein motif:PFAM:PF03739
AM286415.1	EMBL	sequence_feature	578059	578127	.	+	.	ID=id987;Note=6 probable transmembrane helices predicted for YE0502 by TMHMM2.0 at aa 12-34%2C 62-81%2C 102-124%2C 275-294%2C301-318 and 331-353;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	578209	578268	.	+	.	ID=id987;Note=6 probable transmembrane helices predicted for YE0502 by TMHMM2.0 at aa 12-34%2C 62-81%2C 102-124%2C 275-294%2C301-318 and 331-353;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	578329	578397	.	+	.	ID=id987;Note=6 probable transmembrane helices predicted for YE0502 by TMHMM2.0 at aa 12-34%2C 62-81%2C 102-124%2C 275-294%2C301-318 and 331-353;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	578848	578907	.	+	.	ID=id987;Note=6 probable transmembrane helices predicted for YE0502 by TMHMM2.0 at aa 12-34%2C 62-81%2C 102-124%2C 275-294%2C301-318 and 331-353;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	578926	578979	.	+	.	ID=id987;Note=6 probable transmembrane helices predicted for YE0502 by TMHMM2.0 at aa 12-34%2C 62-81%2C 102-124%2C 275-294%2C301-318 and 331-353;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	579016	579084	.	+	.	ID=id987;Note=6 probable transmembrane helices predicted for YE0502 by TMHMM2.0 at aa 12-34%2C 62-81%2C 102-124%2C 275-294%2C301-318 and 331-353;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	579198	579282	.	+	.	ID=gene511;Name=tRNA-Leu (CAA);gbkey=Gene;gene=tRNA-Leu (CAA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	579198	579282	.	+	.	ID=rna40;Parent=gene511;gbkey=tRNA;gene=tRNA-Leu (CAA);product=tRNA-Leu
AM286415.1	EMBL	exon	579198	579282	.	+	.	ID=id988;Parent=rna40;gbkey=tRNA;gene=tRNA-Leu (CAA);product=tRNA-Leu
AM286415.1	EMBL	pseudogene	579768	581027	.	+	.	ID=gene512;Name=YE0505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0505;pseudo=true
AM286415.1	EMBL	CDS	579768	581027	.	+	0	ID=cds478;Parent=gene512;Note=Similar to many P2-like integrases including: Photorhabdus luminescens IntB SWALL:Q9AI09 (EMBL:AF288080) (417 aa) fasta scores: E(): 7.1e-117%2C 66.82 38d in 416 aa%2CYersinia pestis integrase IntB or Ypo3438 SWALL:Q8ZBH6 (EMBL:AJ414157) (419 aa) fasta scores: E(): 2.2e-109%2C62.91 38d in 418 aa and to Bacteriophage P4 Integrase Int SWALL:VINT_BPP4 (SWALL:P08320) (439 aa) fasta scores: E(): 3.6e-99%2C 58.19 38d in 409 aa. Note this CDS contains a stop codon following codon 8;gbkey=CDS;inference=similar to sequence:UniProtKB:P08320;product=phage integrase (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	580377	580931	.	+	.	ID=id989;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 142.3%2C E-value 5.5e-40;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	581162	581530	.	-	.	ID=gene513;Name=YE0506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0506
AM286415.1	EMBL	CDS	581162	581530	.	-	0	ID=cds479;Parent=gene513;Dbxref=EnsemblGenomes-Gn:YE0506,EnsemblGenomes-Tr:CAL10624,InterPro:IPR025528,UniProtKB/TrEMBL:A1JJ34,NCBI_GP:CAL10624.1;Name=CAL10624.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10624.1;transl_table=11
AM286415.1	EMBL	gene	582024	582149	.	+	.	ID=gene514;Name=YE0507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0507
AM286415.1	EMBL	CDS	582024	582149	.	+	0	ID=cds480;Parent=gene514;Dbxref=EnsemblGenomes-Gn:YE0507,EnsemblGenomes-Tr:CAL10625,UniProtKB/TrEMBL:A1JJ35,NCBI_GP:CAL10625.1;Name=CAL10625.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10625.1;transl_table=11
AM286415.1	EMBL	sequence_feature	582066	582134	.	+	.	ID=id990;Note=1 probable transmembrane helix predicted for YE0507 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	582203	582331	.	-	.	ID=gene515;Name=YE0508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0508
AM286415.1	EMBL	CDS	582203	582331	.	-	0	ID=cds481;Parent=gene515;Dbxref=EnsemblGenomes-Gn:YE0508,EnsemblGenomes-Tr:CAL10626,UniProtKB/TrEMBL:A1JJ36,NCBI_GP:CAL10626.1;Name=CAL10626.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10626.1;transl_table=11
AM286415.1	EMBL	gene	582668	582922	.	+	.	ID=gene516;Name=relB;gbkey=Gene;gene=relB;gene_biotype=protein_coding;locus_tag=YE0510
AM286415.1	EMBL	CDS	582668	582922	.	+	0	ID=cds482;Parent=gene516;Dbxref=EnsemblGenomes-Gn:YE0510,EnsemblGenomes-Tr:CAL10627,InterPro:IPR007337,UniProtKB/TrEMBL:A1JJ37,NCBI_GP:CAL10627.1;Name=CAL10627.1;Note=Highly similar to Escherichia coli RelB protein which has undefined regulatory functions%2C SWALL:RELB_ECOLI (SWALL:P07007) (79 aa) fasta scores: E(): 8.1e-13%2C 50 38d in 84 aa. Also similar to Shigella flexneri 2a hypothetical 15.3 kDa protein C0193 SWALL:Q8VSE3 (EMBL:AF386526) (135 aa) fasta scores: E(): 0.0006%2C 35.82 id in 67 aa;gbkey=CDS;gene=relB;inference=similar to sequence:UniProtKB:P07007;product=RelB protein;protein_id=CAL10627.1;transl_table=11
AM286415.1	EMBL	gene	582912	583202	.	+	.	ID=gene517;Name=YE0510A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0510A
AM286415.1	EMBL	CDS	582912	583202	.	+	0	ID=cds483;Parent=gene517;Dbxref=EnsemblGenomes-Gn:YE0510A,EnsemblGenomes-Tr:CAL10628,InterPro:IPR007712,UniProtKB/TrEMBL:A1JJ38,NCBI_GP:CAL10628.1;Name=CAL10628.1;Note=Similar to Escherichia coli hypothetical RelE-like protein (b1563) SWALL:RELE_ECOLI (SWALL:P07008) (95 aa) fasta scores: E(): 1e-17%2C 55.78 38d in 95 aa and to Escherichia coli hypothetical RelE-like protein RelX SWALL:RELX_ECOLI (SWALL:Q60228) (95 aa) fasta scores: E(): 1.4e-18%2C 58.33 38d in 96 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q60228;product=conserved hypothetical protein;protein_id=CAL10628.1;transl_table=11
AM286415.1	EMBL	pseudogene	583381	583731	.	-	.	ID=gene518;Name=YE0511;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0511;pseudo=true
AM286415.1	EMBL	CDS	583381	583731	.	-	0	ID=cds484;Parent=gene518;Note=Similar to the very C-terminus of Yersinia pestis putative regulatory prophage protein Ypo1089 SWALL:Q8ZH24 (EMBL:AJ414146) (362 aa) fasta scores: E(): 1.7e-43%2C96.55 38d in 116 aa. This CDS appears to be a gene remnant.;gbkey=CDS;inference=similar to sequence:INSDC:AJ414146;product=putative phage-related protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	583769	584098	.	+	.	ID=gene519;Name=YE0512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0512
AM286415.1	EMBL	CDS	583769	584098	.	+	0	ID=cds485;Parent=gene519;Dbxref=EnsemblGenomes-Gn:YE0512,EnsemblGenomes-Tr:CAL10630,UniProtKB/TrEMBL:A1JJ39,NCBI_GP:CAL10630.1;Name=CAL10630.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10630.1;transl_table=11
AM286415.1	EMBL	gene	584459	584869	.	+	.	ID=gene520;Name=YE0513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0513
AM286415.1	EMBL	CDS	584459	584869	.	+	0	ID=cds486;Parent=gene520;Dbxref=EnsemblGenomes-Gn:YE0513,EnsemblGenomes-Tr:CAL10631,GOA:A1JJ40,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JJ40,NCBI_GP:CAL10631.1;Name=CAL10631.1;Note=Similar to many including: Pantoea agglomerans hypothetical 17.3 kDa protein SWALL:Q937I1 (EMBL:X99768) (149 aa) fasta scores: E(): 7.4e-16%2C 42.1 38d in 133 aa%2CSalmonella typhi putative acetyltransferase Sty1991 SWALL:Q8Z655 (EMBL:AL627272) (139 aa) fasta scores: E(): 8.8e-13%2C 40.58 38d in 138 aa and to Streptoverticillium sp. blasticidin S-acetyltransferase BlS SWALL:BLS_STRSJ (SWALL:P19997) (136 aa) fasta scores: E(): 2.4e-09%2C 35.08 id in 114 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P19997;product=putative acetyltransferase;protein_id=CAL10631.1;transl_table=11
AM286415.1	EMBL	sequence_feature	584573	584803	.	+	.	ID=id991;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 74.5%2C E-value 1.5e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	584895	585584	.	+	.	ID=gene521;Name=YE0514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0514
AM286415.1	EMBL	CDS	584895	585584	.	+	0	ID=cds487;Parent=gene521;Dbxref=EnsemblGenomes-Gn:YE0514,EnsemblGenomes-Tr:CAL10632,GOA:A1JJ41,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR013656,InterPro:IPR016032,UniProtKB/TrEMBL:A1JJ41,NCBI_GP:CAL10632.1;Name=CAL10632.1;Note=Similar to many including: Pseudomonas aeruginosa probable transcriptional regulator Pa1347 SWALL:Q9I3Z7 (EMBL:AE004564) (230 aa) fasta scores: E(): 8.4e-06%2C26.47 38d in 204 aa and Vibrio cholerae transcriptional regulator%2C LuxR family Vca1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 6.8e-05%2C22.42 38d in 223 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004564;product=putative transcriptional regulator;protein_id=CAL10632.1;transl_table=11
AM286415.1	EMBL	sequence_feature	585345	585551	.	+	.	ID=id992;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 21.4%2C E-value 1.9e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	585399	585464	.	+	.	ID=id993;Note=Predicted helix-turn-helix motif with score 1433.000%2C SD 4.07 at aa 169-190%2C sequence LSVKEIAKIYNISTKTIENRIY;gbkey=misc_feature
AM286415.1	EMBL	gene	585621	586928	.	+	.	ID=gene522;Name=YE0515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0515
AM286415.1	EMBL	CDS	585621	586928	.	+	0	ID=cds488;Parent=gene522;Dbxref=EnsemblGenomes-Gn:YE0515,EnsemblGenomes-Tr:CAL10633,GOA:A1JJ42,InterPro:IPR001248,UniProtKB/TrEMBL:A1JJ42,NCBI_GP:CAL10633.1;Name=CAL10633.1;gbkey=CDS;product=putative permease;protein_id=CAL10633.1;transl_table=11
AM286415.1	EMBL	sequence_feature	585651	586868	.	+	.	ID=id994;Note=Pfam match to entry PF02133 Transp_cyt_pur%2CPermease for cytosine/purines%2C uracil%2C thiamine%2C allantoin%2C score -9.7%2C E-value 2.6e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF02133
AM286415.1	EMBL	sequence_feature	585678	585746	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	585774	585842	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	585900	585968	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	586011	586070	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	586083	586151	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	586194	586262	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	586299	586367	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	586395	586463	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	586533	586601	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	586617	586685	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	586755	586808	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	586818	586886	.	+	.	ID=id995;Note=12 probable transmembrane helices predicted for YE0515 by TMHMM2.0 at aa 20-42%2C 52-74%2C 94-116%2C 131-150%2C155-177%2C 192-214%2C 227-249%2C 259-281%2C 305-327%2C 333-355%2C379-396 and 400-422;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	587027	587191	.	+	.	ID=gene523;Name=YE0516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0516
AM286415.1	EMBL	CDS	587027	587191	.	+	0	ID=cds489;Parent=gene523;Dbxref=EnsemblGenomes-Gn:YE0516,EnsemblGenomes-Tr:CAL10634,UniProtKB/TrEMBL:A1JJ43,NCBI_GP:CAL10634.1;Name=CAL10634.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=putative membrane protein;protein_id=CAL10634.1;transl_table=11
AM286415.1	EMBL	sequence_feature	587069	587137	.	+	.	ID=id996;Note=1 probable transmembrane helix predicted for YE0516 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	587567	587755	.	-	.	ID=gene524;Name=YE0517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0517
AM286415.1	EMBL	CDS	587567	587755	.	-	0	ID=cds490;Parent=gene524;Dbxref=EnsemblGenomes-Gn:YE0517,EnsemblGenomes-Tr:CAL10635,UniProtKB/TrEMBL:A1JJ44,NCBI_GP:CAL10635.1;Name=CAL10635.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=putative membrane protein;protein_id=CAL10635.1;transl_table=11
AM286415.1	EMBL	sequence_feature	587687	587746	.	-	.	ID=id997;Note=1 probable transmembrane helix predicted for YE0517 by TMHMM2.0 at aa 4-23;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	587957	589264	.	+	.	ID=gene525;Name=YE0518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0518
AM286415.1	EMBL	CDS	587957	589264	.	+	0	ID=cds491;Parent=gene525;Dbxref=EnsemblGenomes-Gn:YE0518,EnsemblGenomes-Tr:CAL10636,GOA:A1JJ45,InterPro:IPR001248,UniProtKB/TrEMBL:A1JJ45,NCBI_GP:CAL10636.1;Name=CAL10636.1;Note=Similar to Escherichia coli cytosine permease CodB or b0336 SWALL:CODB_ECOLI (SWALL:P25525) (419 aa) fasta scores: E(): 1.8e-23%2C 28.03 38d in 428 aa and Streptomyces coelicolor putative cytosine permease Sco0572 or Sc5g5.04C SWALL:Q93RZ8 (EMBL:AL591823) (466 aa) fasta scores: E(): 6.3e-51%2C 38.15 38d in 422 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P25525;product=putative permease;protein_id=CAL10636.1;transl_table=11
AM286415.1	EMBL	sequence_feature	588011	589210	.	+	.	ID=id998;Note=Pfam match to entry PF02133 Transp_cyt_pur%2CPermease for cytosine/purines%2C uracil%2C thiamine%2C allantoin%2C score -45.9%2C E-value 4e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF02133
AM286415.1	EMBL	sequence_feature	588026	588085	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	588113	588181	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	588218	588286	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	588344	588403	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	588422	588490	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	588533	588601	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	588638	588706	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	588734	588793	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	588869	588937	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	588953	589021	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	589091	589144	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	589154	589222	.	+	.	ID=id999;Note=12 probable transmembrane helices predicted for YE0518 by TMHMM2.0 at aa 7-26%2C 36-58%2C 71-93%2C 113-132%2C139-161%2C 176-198%2C 211-233%2C 243-262%2C 288-310%2C 316-338%2C362-379 and 383-405;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	589409	590173	.	+	.	ID=gene526;Name=YE0519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0519
AM286415.1	EMBL	CDS	589409	590173	.	+	0	ID=cds492;Parent=gene526;Dbxref=EnsemblGenomes-Gn:YE0519,EnsemblGenomes-Tr:CAL10637,InterPro:IPR003615,UniProtKB/TrEMBL:A1JJ46,NCBI_GP:CAL10637.1;Name=CAL10637.1;Note=Weakly similar to several e.g. Zymomonas mobilis hypothetical 36.8 kDa protein SWALL:Q9Z668 (EMBL:AF102543) (318 aa) fasta scores: E(): 8.1e-09%2C 28.34 38d in 254 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF102543;product=hypothetical protein;protein_id=CAL10637.1;transl_table=11
AM286415.1	EMBL	gene	590196	590498	.	-	.	ID=gene527;Name=YE0520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0520
AM286415.1	EMBL	CDS	590196	590498	.	-	0	ID=cds493;Parent=gene527;Dbxref=EnsemblGenomes-Gn:YE0520,EnsemblGenomes-Tr:CAL10638,UniProtKB/TrEMBL:A1JJ47,NCBI_GP:CAL10638.1;Name=CAL10638.1;Note=Weakly similar to Pseudomonas syringae putative RNA polymerase sigma factor HrpL SWALL:Q9R9F2 (EMBL:AB016369) (184 aa) fasta scores: E(): 4.2%2C 30.23 38d in 86 aa;gbkey=CDS;inference=similar to sequence:INSDC:AB016369;product=putative exported protein;protein_id=CAL10638.1;transl_table=11
AM286415.1	EMBL	gene	590732	591214	.	-	.	ID=gene528;Name=YE0521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0521
AM286415.1	EMBL	CDS	590732	591214	.	-	0	ID=cds494;Parent=gene528;Dbxref=EnsemblGenomes-Gn:YE0521,EnsemblGenomes-Tr:CAL10639,InterPro:IPR019637,UniProtKB/TrEMBL:A1JJ48,NCBI_GP:CAL10639.1;Name=CAL10639.1;Note=Similar to several including: Yersinia pestis putative exported protein Ypo0406 SWALL:Q8ZIT2 (EMBL:AJ414142) (163 aa) fasta scores: E(): 1.4e-40%2C77.91 38d in 163 aa%2C and to Escherichia coli hypothetical protein precursor YjjA or b4360 SWALL:YJJA_ECOLI (SWALL:P18390) (164 aa) fasta scores: E(): 1.8e-20%2C 45.39 id in 163 aa. Contains a possible N-terminal hydrophobic region.;gbkey=CDS;inference=similar to sequence:UniProtKB:P18390;product=conserved hypothetical protein;protein_id=CAL10639.1;transl_table=11
AM286415.1	EMBL	pseudogene	591339	591899	.	-	.	ID=gene529;Name=YE0522;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0522;pseudo=true
AM286415.1	EMBL	CDS	591339	591899	.	-	0	ID=cds495;Parent=gene529;Dbxref=PSEUDO:CAL10640.1;Note=no signiificant database hits;gbkey=CDS;product=putative exported protein;pseudo=true;transl_table=11
AM286415.1	EMBL	signal_peptide	591840	591899	.	-	.	ID=id1000;Note=Signal peptide predicted for YE0522 by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.964 between residues 20 and 21;gbkey=sig_peptide;pseudo=true
AM286415.1	EMBL	gene	592004	592294	.	-	.	ID=gene530;Name=YE0523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0523
AM286415.1	EMBL	CDS	592004	592294	.	-	0	ID=cds496;Parent=gene530;Dbxref=EnsemblGenomes-Gn:YE0523,EnsemblGenomes-Tr:CAL10641,GOA:A1JJ50,InterPro:IPR007138,InterPro:IPR011008,NCBI_GP:CAL10641.1;Name=CAL10641.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10641.1;transl_table=11
AM286415.1	EMBL	sequence_feature	592010	592294	.	-	.	ID=id1001;Note=Pfam match to entry PF02619 DUF176%2C Uncharacterized ACR%2C YneC family COG1359%2C score 131.7%2C E-value 8.8e-37;gbkey=misc_feature;inference=protein motif:PFAM:PF02619
AM286415.1	EMBL	gene	592356	593231	.	-	.	ID=gene531;Name=YE0524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0524
AM286415.1	EMBL	CDS	592356	593231	.	-	0	ID=cds497;Parent=gene531;Dbxref=EnsemblGenomes-Gn:YE0524,EnsemblGenomes-Tr:CAL10642,GOA:A1JJ51,InterPro:IPR002915,InterPro:IPR013785,NCBI_GP:CAL10642.1;Name=CAL10642.1;gbkey=CDS;product=putative aldolase;protein_id=CAL10642.1;transl_table=11
AM286415.1	EMBL	sequence_feature	592410	592667	.	-	.	ID=id1002;Note=Pfam match to entry PF01791 DeoC%2CDeoxyribose-phosphate aldolase%2C score 37.8%2C E-value 1.2e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF01791
AM286415.1	EMBL	sequence_feature	593028	593075	.	-	.	ID=id1003;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	gene	593287	594321	.	-	.	ID=gene532;Name=YE0525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0525
AM286415.1	EMBL	CDS	593287	594321	.	-	0	ID=cds498;Parent=gene532;Dbxref=EnsemblGenomes-Gn:YE0525,EnsemblGenomes-Tr:CAL10643,GOA:A1JJ52,InterPro:IPR025997,InterPro:IPR028082,NCBI_GP:CAL10643.1;Name=CAL10643.1;gbkey=CDS;product=putative periplasmic solute-binding protein;protein_id=CAL10643.1;transl_table=11
AM286415.1	EMBL	sequence_feature	594229	594297	.	-	.	ID=id1004;Note=1 probable transmembrane helix predicted for YE0525 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	594265	594297	.	-	.	ID=id1005;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	594378	595373	.	-	.	ID=gene533;Name=YE0526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0526
AM286415.1	EMBL	CDS	594378	595373	.	-	0	ID=cds499;Parent=gene533;Dbxref=EnsemblGenomes-Gn:YE0526,EnsemblGenomes-Tr:CAL10644,GOA:A1JJ53,InterPro:IPR001851,NCBI_GP:CAL10644.1;Name=CAL10644.1;gbkey=CDS;product=putative ABC transporter permease protein;protein_id=CAL10644.1;transl_table=11
AM286415.1	EMBL	sequence_feature	594402	595277	.	-	.	ID=id1006;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score -29.9%2C E-value 2.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	sequence_feature	595296	595355	.	-	.	ID=id1007;Note=9 probable transmembrane helices predicted for YE0526 by TMHMM2.0 at aa 7-26%2C 36-58%2C 65-86%2C 90-112%2C119-141%2C 161-183%2C 213-235%2C 250-281 and 294-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	595200	595268	.	-	.	ID=id1007;Note=9 probable transmembrane helices predicted for YE0526 by TMHMM2.0 at aa 7-26%2C 36-58%2C 65-86%2C 90-112%2C119-141%2C 161-183%2C 213-235%2C 250-281 and 294-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	595116	595181	.	-	.	ID=id1007;Note=9 probable transmembrane helices predicted for YE0526 by TMHMM2.0 at aa 7-26%2C 36-58%2C 65-86%2C 90-112%2C119-141%2C 161-183%2C 213-235%2C 250-281 and 294-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	595038	595106	.	-	.	ID=id1007;Note=9 probable transmembrane helices predicted for YE0526 by TMHMM2.0 at aa 7-26%2C 36-58%2C 65-86%2C 90-112%2C119-141%2C 161-183%2C 213-235%2C 250-281 and 294-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	594951	595019	.	-	.	ID=id1007;Note=9 probable transmembrane helices predicted for YE0526 by TMHMM2.0 at aa 7-26%2C 36-58%2C 65-86%2C 90-112%2C119-141%2C 161-183%2C 213-235%2C 250-281 and 294-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	594825	594893	.	-	.	ID=id1007;Note=9 probable transmembrane helices predicted for YE0526 by TMHMM2.0 at aa 7-26%2C 36-58%2C 65-86%2C 90-112%2C119-141%2C 161-183%2C 213-235%2C 250-281 and 294-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	594669	594737	.	-	.	ID=id1007;Note=9 probable transmembrane helices predicted for YE0526 by TMHMM2.0 at aa 7-26%2C 36-58%2C 65-86%2C 90-112%2C119-141%2C 161-183%2C 213-235%2C 250-281 and 294-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	594531	594626	.	-	.	ID=id1007;Note=9 probable transmembrane helices predicted for YE0526 by TMHMM2.0 at aa 7-26%2C 36-58%2C 65-86%2C 90-112%2C119-141%2C 161-183%2C 213-235%2C 250-281 and 294-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	594435	594494	.	-	.	ID=id1007;Note=9 probable transmembrane helices predicted for YE0526 by TMHMM2.0 at aa 7-26%2C 36-58%2C 65-86%2C 90-112%2C119-141%2C 161-183%2C 213-235%2C 250-281 and 294-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	595370	596359	.	-	.	ID=gene534;Name=YE0527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0527
AM286415.1	EMBL	CDS	595370	596359	.	-	0	ID=cds500;Parent=gene534;Dbxref=EnsemblGenomes-Gn:YE0527,EnsemblGenomes-Tr:CAL10645,GOA:A1JJ54,InterPro:IPR001851,NCBI_GP:CAL10645.1;Name=CAL10645.1;gbkey=CDS;product=putative ABC transporter permease protein;protein_id=CAL10645.1;transl_table=11
AM286415.1	EMBL	sequence_feature	595496	596338	.	-	.	ID=id1008;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score 12.0%2C E-value 3.2e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	sequence_feature	596255	596323	.	-	.	ID=id1009;Note=7 probable transmembrane helices predicted for YE0527 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 130-152%2C183-205%2C 225-247 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	596144	596212	.	-	.	ID=id1009;Note=7 probable transmembrane helices predicted for YE0527 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 130-152%2C183-205%2C 225-247 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	596057	596125	.	-	.	ID=id1009;Note=7 probable transmembrane helices predicted for YE0527 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 130-152%2C183-205%2C 225-247 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	595904	595972	.	-	.	ID=id1009;Note=7 probable transmembrane helices predicted for YE0527 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 130-152%2C183-205%2C 225-247 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	595745	595813	.	-	.	ID=id1009;Note=7 probable transmembrane helices predicted for YE0527 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 130-152%2C183-205%2C 225-247 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	595619	595687	.	-	.	ID=id1009;Note=7 probable transmembrane helices predicted for YE0527 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 130-152%2C183-205%2C 225-247 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	595532	595600	.	-	.	ID=id1009;Note=7 probable transmembrane helices predicted for YE0527 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 130-152%2C183-205%2C 225-247 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	596159	596191	.	-	.	ID=id1010;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	596446	598029	.	-	.	ID=gene535;Name=YE0528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0528
AM286415.1	EMBL	CDS	596446	598029	.	-	0	ID=cds501;Parent=gene535;Dbxref=EnsemblGenomes-Gn:YE0528,EnsemblGenomes-Tr:CAL10646,GOA:A1JJ55,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,NCBI_GP:CAL10646.1;Name=CAL10646.1;gbkey=CDS;product=putative ABC transporter ATP-binding protein;protein_id=CAL10646.1;transl_table=11
AM286415.1	EMBL	sequence_feature	596584	597156	.	-	.	ID=id1011;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 109.0%2C E-value 5.8e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	596767	596811	.	-	.	ID=id1012;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	597382	597921	.	-	.	ID=id1013;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 171.9%2C E-value 6.9e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	597877	597900	.	-	.	ID=id1014;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	598407	599384	.	+	.	ID=gene536;Name=YE0529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0529
AM286415.1	EMBL	CDS	598407	599384	.	+	0	ID=cds502;Parent=gene536;Dbxref=EnsemblGenomes-Gn:YE0529,EnsemblGenomes-Tr:CAL10647,GOA:A1JJ56,InterPro:IPR001808,InterPro:IPR007324,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJ56,NCBI_GP:CAL10647.1;Name=CAL10647.1;gbkey=CDS;product=putative transcriptional regulatory protein;protein_id=CAL10647.1;transl_table=11
AM286415.1	EMBL	sequence_feature	598518	598583	.	+	.	ID=id1015;Note=Predicted helix-turn-helix motif with score 1593.000%2C SD 4.61 at aa 38-59%2C sequence LTQGDIGELLGLTRLKVSRLLE;gbkey=misc_feature
AM286415.1	EMBL	gene	599707	601257	.	+	.	ID=gene537;Name=YE0530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0530
AM286415.1	EMBL	CDS	599707	601257	.	+	0	ID=cds503;Parent=gene537;Dbxref=EnsemblGenomes-Gn:YE0530,EnsemblGenomes-Tr:CAL10648,GOA:A1JJ57,InterPro:IPR018484,InterPro:IPR018485,NCBI_GP:CAL10648.1;Name=CAL10648.1;gbkey=CDS;product=putative carbohydrate kinase;protein_id=CAL10648.1;transl_table=11
AM286415.1	EMBL	sequence_feature	599710	600444	.	+	.	ID=id1016;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C N-terminal domain%2C score 149.0%2CE-value 5.4e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF00370
AM286415.1	EMBL	sequence_feature	600451	601161	.	+	.	ID=id1017;Note=Pfam match to entry PF02782 FGGY_C%2C FGGY family of carbohydrate kinases%2C C-terminal domain%2C score 36.3%2CE-value 5.2e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF02782
AM286415.1	EMBL	gene	601930	602877	.	+	.	ID=gene538;Name=YE0531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0531
AM286415.1	EMBL	CDS	601930	602877	.	+	0	ID=cds504;Parent=gene538;Dbxref=EnsemblGenomes-Gn:YE0531,EnsemblGenomes-Tr:CAL10649,GOA:A1JJ58,InterPro:IPR002201,InterPro:IPR011916,UniProtKB/TrEMBL:A1JJ58,NCBI_GP:CAL10649.1;Name=CAL10649.1;gbkey=CDS;product=putative lipopolysaccharide core biosynthesis protein;protein_id=CAL10649.1;transl_table=11
AM286415.1	EMBL	sequence_feature	602044	602814	.	+	.	ID=id1018;Note=Pfam match to entry PF01075 Glyco_transf_9%2CGlycosyltransferase family 9 (heptosyltransferase)%2C score 100.5%2C E-value 2.2e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF01075
AM286415.1	EMBL	gene	602964	604187	.	+	.	ID=gene539;Name=YE0532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0532
AM286415.1	EMBL	CDS	602964	604187	.	+	0	ID=cds505;Parent=gene539;Dbxref=EnsemblGenomes-Gn:YE0532,EnsemblGenomes-Tr:CAL10650,UniProtKB/TrEMBL:A1JJ59,NCBI_GP:CAL10650.1;Name=CAL10650.1;gbkey=CDS;product=putative O-antigen biosynthesis protein;protein_id=CAL10650.1;transl_table=11
AM286415.1	EMBL	sequence_feature	603000	603101	.	+	.	ID=id1019;Note=10 probable transmembrane helices predicted for YE0532 by TMHMM2.0 at aa 13-46%2C 61-83%2C 113-135%2C 150-172%2C179-198%2C 202-219%2C 224-241%2C 323-345%2C 352-374 and 379-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	603144	603212	.	+	.	ID=id1019;Note=10 probable transmembrane helices predicted for YE0532 by TMHMM2.0 at aa 13-46%2C 61-83%2C 113-135%2C 150-172%2C179-198%2C 202-219%2C 224-241%2C 323-345%2C 352-374 and 379-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	603300	603368	.	+	.	ID=id1019;Note=10 probable transmembrane helices predicted for YE0532 by TMHMM2.0 at aa 13-46%2C 61-83%2C 113-135%2C 150-172%2C179-198%2C 202-219%2C 224-241%2C 323-345%2C 352-374 and 379-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	603411	603479	.	+	.	ID=id1019;Note=10 probable transmembrane helices predicted for YE0532 by TMHMM2.0 at aa 13-46%2C 61-83%2C 113-135%2C 150-172%2C179-198%2C 202-219%2C 224-241%2C 323-345%2C 352-374 and 379-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	603498	603557	.	+	.	ID=id1019;Note=10 probable transmembrane helices predicted for YE0532 by TMHMM2.0 at aa 13-46%2C 61-83%2C 113-135%2C 150-172%2C179-198%2C 202-219%2C 224-241%2C 323-345%2C 352-374 and 379-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	603567	603620	.	+	.	ID=id1019;Note=10 probable transmembrane helices predicted for YE0532 by TMHMM2.0 at aa 13-46%2C 61-83%2C 113-135%2C 150-172%2C179-198%2C 202-219%2C 224-241%2C 323-345%2C 352-374 and 379-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	603633	603686	.	+	.	ID=id1019;Note=10 probable transmembrane helices predicted for YE0532 by TMHMM2.0 at aa 13-46%2C 61-83%2C 113-135%2C 150-172%2C179-198%2C 202-219%2C 224-241%2C 323-345%2C 352-374 and 379-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	603930	603998	.	+	.	ID=id1019;Note=10 probable transmembrane helices predicted for YE0532 by TMHMM2.0 at aa 13-46%2C 61-83%2C 113-135%2C 150-172%2C179-198%2C 202-219%2C 224-241%2C 323-345%2C 352-374 and 379-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	604017	604085	.	+	.	ID=id1019;Note=10 probable transmembrane helices predicted for YE0532 by TMHMM2.0 at aa 13-46%2C 61-83%2C 113-135%2C 150-172%2C179-198%2C 202-219%2C 224-241%2C 323-345%2C 352-374 and 379-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	604098	604151	.	+	.	ID=id1019;Note=10 probable transmembrane helices predicted for YE0532 by TMHMM2.0 at aa 13-46%2C 61-83%2C 113-135%2C 150-172%2C179-198%2C 202-219%2C 224-241%2C 323-345%2C 352-374 and 379-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	603501	603533	.	+	.	ID=id1020;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	605641	607149	.	+	.	ID=gene540;Name=arcD;gbkey=Gene;gene=arcD;gene_biotype=protein_coding;locus_tag=YE0534
AM286415.1	EMBL	CDS	605641	607149	.	+	0	ID=cds506;Parent=gene540;Dbxref=EnsemblGenomes-Gn:YE0534,EnsemblGenomes-Tr:CAL10651,GOA:A1JJ60,InterPro:IPR002293,UniProtKB/TrEMBL:A1JJ60,NCBI_GP:CAL10651.1;Name=CAL10651.1;Note=Similar to Pseudomonas aeruginosa arginine/ornithine antiporter ArcD or Pa5170 SWALL:ARCD_PSEAE (SWALL:P18275) (482 aa) fasta scores: E(): 1.1e-40%2C 52.06 38d in 509 aa and Rhizobium meliloti probable arcd1 arginine/ornithine antiporter ArcD1 or Ra0913 or sma1667 SWALL:Q92YG7 (EMBL:AE007277) (475 aa) fasta scores: E(): 1.9e-59%2C 59.11 38d in 499 aa;gbkey=CDS;gene=arcD;inference=similar to sequence:UniProtKB:P18275;product=arginine/ornithine antiporter;protein_id=CAL10651.1;transl_table=11
AM286415.1	EMBL	sequence_feature	605677	605745	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	605755	605823	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	605902	605970	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	606013	606081	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	606100	606168	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	606316	606384	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	606421	606489	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	606547	606615	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	606706	606774	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	606787	606855	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	606913	606966	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	606976	607029	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	607075	607143	.	+	.	ID=id1021;Note=13 probable transmembrane helices predicted for YE0534 by TMHMM2.0 at aa 13-35%2C 39-61%2C 88-110%2C 125-147%2C154-176%2C 226-248%2C 261-283%2C 303-325%2C 356-378%2C 383-405%2C425-442%2C 446-463 and 479-501;gbkey=misc_feature;gene=arcD;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	sequence_feature	605677	607038	.	+	.	ID=id1022;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -295.3%2C E-value 0.037;gbkey=misc_feature;gene=arcD;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	gene	607165	608448	.	+	.	ID=gene541;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=YE0535
AM286415.1	EMBL	CDS	607165	608448	.	+	0	ID=cds507;Parent=gene541;Dbxref=EnsemblGenomes-Gn:YE0535,EnsemblGenomes-Tr:CAL10652,GOA:A1JJ62,InterPro:IPR003198,InterPro:IPR003876,UniProtKB/TrEMBL:A1JJ62,NCBI_GP:CAL10652.1;Name=CAL10652.1;Note=Similar to Pseudomonas aeruginosa arginine deiminase ArcA or Pa5171 SWALL:ARCA_PSEAE (SWALL:P13981) (417 aa) fasta scores: E(): 4.1e-117%2C 66.02 38d in 418 aa and Rhizobium loti arginine deiminase Mll6733 SWALL:Q988I1 (EMBL:AP003010) (412 aa) fasta scores: E(): 5.4e-128%2C75.18 38d in 415 aa;gbkey=CDS;gene=arcA;inference=similar to sequence:UniProtKB:P13981;product=arginine deiminase;protein_id=CAL10652.1;transl_table=11
AM286415.1	EMBL	sequence_feature	607216	608430	.	+	.	ID=id1023;Note=Pfam match to entry PF02274 Amidinotransf%2CAmidinotransferase%2C score 594.6%2C E-value 4e-176;gbkey=misc_feature;gene=arcA;inference=protein motif:PFAM:PF02274
AM286415.1	EMBL	gene	608930	610012	.	+	.	ID=gene542;Name=YE0536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0536
AM286415.1	EMBL	CDS	608930	610012	.	+	0	ID=cds508;Parent=gene542;Dbxref=EnsemblGenomes-Gn:YE0536,EnsemblGenomes-Tr:CAL10653,GOA:A1JJ63,InterPro:IPR006143,UniProtKB/TrEMBL:A1JJ63,NCBI_GP:CAL10653.1;Name=CAL10653.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL10653.1;transl_table=11
AM286415.1	EMBL	sequence_feature	608951	608983	.	+	.	ID=id1024;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	610012	613098	.	+	.	ID=gene543;Name=YE0537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0537
AM286415.1	EMBL	CDS	610012	613098	.	+	0	ID=cds509;Parent=gene543;Dbxref=EnsemblGenomes-Gn:YE0537,EnsemblGenomes-Tr:CAL10654,GOA:A1JJ64,InterPro:IPR001036,InterPro:IPR027463,UniProtKB/TrEMBL:A1JJ64,NCBI_GP:CAL10654.1;Name=CAL10654.1;gbkey=CDS;product=putative multi-drug efflux protein;protein_id=CAL10654.1;transl_table=11
AM286415.1	EMBL	sequence_feature	610018	613053	.	+	.	ID=id1025;Note=Pfam match to entry PF00873 ACR_tran%2CAcrB/AcrD/AcrF family%2C score 279.8%2C E-value 2.2e-81;gbkey=misc_feature;inference=protein motif:PFAM:PF00873
AM286415.1	EMBL	sequence_feature	610054	610110	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	611014	611082	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	611092	611160	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	611179	611247	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	611305	611373	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	611410	611469	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	611581	611649	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	612601	612669	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	612712	612780	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	612886	612945	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	612973	613041	.	+	.	ID=id1026;Note=11 probable transmembrane helices predicted for YE0537 by TMHMM2.0 at aa 15-33%2C 335-357%2C 361-383%2C 390-412%2C432-454%2C 467-486%2C 524-546%2C 864-886%2C 901-923%2C 959-978 and 988-1010;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	613015	613047	.	+	.	ID=id1027;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	repeat_region	613146	614572	.	+	.	ID=id1028;Note=IS4-like insertion sequence element IS1660;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	613146	613161	.	+	.	ID=id1029;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	613229	614563	.	+	.	ID=gene544;Name=YE0538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0538
AM286415.1	EMBL	CDS	613229	614563	.	+	0	ID=cds510;Parent=gene544;Dbxref=EnsemblGenomes-Gn:YE0538,EnsemblGenomes-Tr:CAL10655,GOA:A1JHZ4,InterPro:IPR002559,InterPro:IPR012337,InterPro:IPR024473,UniProtKB/TrEMBL:A1JHZ4,NCBI_GP:CAL10655.1;Name=CAL10655.1;Note=Highly similar to many transposases from the IS element IS4 including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 9.8e-166%2C89.54 38d in 440 aa and to Pantoea agglomerans insertion element protein SWALL:P71168 (EMBL:X81894) (440 aa) fasta scores: E(): 1.7e-86%2C 52.42 38d in 433 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1660;protein_id=CAL10655.1;transl_table=11
AM286415.1	EMBL	sequence_feature	613607	614284	.	+	.	ID=id1030;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 160.8%2C E-value 1.5e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	stem_loop	614540	614571	.	+	.	ID=id1031;gbkey=stem_loop
AM286415.1	EMBL	INVERTED	614557	614572	.	-	.	ID=id1032;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	614850	615944	.	+	.	ID=gene545;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=YE0539
AM286415.1	EMBL	CDS	614850	615944	.	+	0	ID=cds511;Parent=gene545;Dbxref=EnsemblGenomes-Gn:YE0539,EnsemblGenomes-Tr:CAL10656,GOA:A1JJ66,InterPro:IPR001670,InterPro:IPR016205,InterPro:IPR018211,UniProtKB/TrEMBL:A1JJ66,NCBI_GP:CAL10656.1;Name=CAL10656.1;Note=Similar to Citrobacter freundii glycerol dehydrogenase DhaD SWALL:GLDA_CITFR (SWALL:P45511) (365 aa) fasta scores: E(): 3.2e-103%2C 73.82 38d in 363 aa and Escherichia coli glycerol dehydrogenase GldA or b3945 SWALL:GLDA_ECOLI (SWALL:P32665) (367 aa) fasta scores: E(): 6.4e-80%2C 58.12 38d in 363 aa;gbkey=CDS;gene=gldA;inference=similar to sequence:UniProtKB:P45511;product=glycerol dehydrogenase;protein_id=CAL10656.1;transl_table=11
AM286415.1	EMBL	sequence_feature	614871	615893	.	+	.	ID=id1033;Note=Pfam match to entry PF00465 Fe-ADH%2C Iron-containing alcohol dehydrogenase%2C score 352.0%2C E-value 4.2e-103;gbkey=misc_feature;gene=gldA;inference=protein motif:PFAM:PF00465
AM286415.1	EMBL	sequence_feature	615297	615383	.	+	.	ID=id1034;Note=PS00913 Iron-containing alcohol dehydrogenases signature 1.;gbkey=misc_feature;gene=gldA;inference=protein motif:Prosite:PS00913
AM286415.1	EMBL	sequence_feature	615570	615632	.	+	.	ID=id1035;Note=PS00060 Iron-containing alcohol dehydrogenases signature 2.;gbkey=misc_feature;gene=gldA;inference=protein motif:Prosite:PS00060
AM286415.1	EMBL	sequence_feature	615582	615605	.	+	.	ID=id1036;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=misc_feature;gene=gldA;inference=protein motif:Prosite:PS00687
AM286415.1	EMBL	gene	615982	617106	.	+	.	ID=gene546;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;gene_synonym=ycgT;locus_tag=YE0540
AM286415.1	EMBL	CDS	615982	617106	.	+	0	ID=cds512;Parent=gene546;Dbxref=EnsemblGenomes-Gn:YE0540,EnsemblGenomes-Tr:CAL10657,GOA:A1JJ67,InterPro:IPR004006,InterPro:IPR012736,UniProtKB/TrEMBL:A1JJ67,NCBI_GP:CAL10657.1;Name=CAL10657.1;gbkey=CDS;gene=dhaK;product=putative dihydroxyacetone kinase;protein_id=CAL10657.1;transl_table=11
AM286415.1	EMBL	sequence_feature	616066	617103	.	+	.	ID=id1037;Note=Pfam match to entry PF02733 Dak1%2C Dak1 domain %2Cscore 602.8%2C E-value 1.3e-178;gbkey=misc_feature;gene=dhaK;inference=protein motif:PFAM:PF02733
AM286415.1	EMBL	gene	617124	617756	.	+	.	ID=gene547;Name=YE0541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0541
AM286415.1	EMBL	CDS	617124	617756	.	+	0	ID=cds513;Parent=gene547;Dbxref=EnsemblGenomes-Gn:YE0541,EnsemblGenomes-Tr:CAL10658,GOA:A1JJ68,InterPro:IPR004007,InterPro:IPR012737,UniProtKB/TrEMBL:A1JJ68,NCBI_GP:CAL10658.1;Name=CAL10658.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10658.1;transl_table=11
AM286415.1	EMBL	sequence_feature	617214	617741	.	+	.	ID=id1038;Note=Pfam match to entry PF02734 Dak2%2C DAK2 domain %2Cscore 225.8%2C E-value 4.2e-65;gbkey=misc_feature;inference=protein motif:PFAM:PF02734
AM286415.1	EMBL	gene	617790	619223	.	+	.	ID=gene548;Name=YE0542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0542
AM286415.1	EMBL	CDS	617790	619223	.	+	0	ID=cds514;Parent=gene548;Dbxref=EnsemblGenomes-Gn:YE0542,EnsemblGenomes-Tr:CAL10659,GOA:A1JJ69,InterPro:IPR000032,InterPro:IPR001020,InterPro:IPR004701,InterPro:IPR008279,InterPro:IPR008731,InterPro:IPR012844,UniProtKB/TrEMBL:A1JJ69,NCBI_GP:CAL10659.1;Name=CAL10659.1;Note=Similar in the N-terminus to several phosphocarrier proteins e.g. Escherichia coli putative multiphosphoryl transfer protein PmpT SWALL:Q8VP39 (EMBL:AF289032) blast scores: E(): 2e-36%2C score: 387 41 38d. Similar in the C-terminal region to many PEP-binding proteins e.g. Caulobacter crescentus pts system%2C fructose-specific EIIA/Hpr/EI components Cc0537 SWALL:Q9AAQ9 (EMBL:AE005726) blast scores: E(): 8e-26%2C score: 296 29 38d. Similar over entire length to Escherichia coli O157:H7 putative pts system enzyme I Ycgc or z1969 or ecs1703 SWALL:Q8XDH6 (EMBL:AE005337) (473 aa) fasta scores: E(): 1.3e-62%2C47.87 38d in 447 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF289032;product=multifunctional PTS-system sugar transferase;protein_id=CAL10659.1;transl_table=11
AM286415.1	EMBL	sequence_feature	618249	618500	.	+	.	ID=id1039;Note=Pfam match to entry PF00381 PTS-HPr%2C PTS HPr component phosphorylation site%2C score 63.4%2C E-value 3.3e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00381
AM286415.1	EMBL	sequence_feature	618957	619205	.	+	.	ID=id1040;Note=Pfam match to entry PF00391 PEP-utilizers%2CPEP-utilizing enzyme%2C mobile domain%2C score 44.1%2C E-value 2.1e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00391
AM286415.1	EMBL	gene	619269	620474	.	-	.	ID=gene549;Name=YE0543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0543
AM286415.1	EMBL	CDS	619269	620474	.	-	0	ID=cds515;Parent=gene549;Dbxref=EnsemblGenomes-Gn:YE0543,EnsemblGenomes-Tr:CAL10660,GOA:A1JJ70,InterPro:IPR001296,UniProtKB/TrEMBL:A1JJ70,NCBI_GP:CAL10660.1;Name=CAL10660.1;Note=Similar to many possible glycosyltransferases e.g. Streptomyces lincolnensis LmbT protein SWALL:Q54374 (EMBL:X79146) (411 aa) fasta scores: E(): 1.3e-13%2C 25.94 id in 316 aa%2C and to Pyrobaculum aerophilum Pae0440 SWALL:Q8ZZ46 (EMBL:AE009767) (360 aa) fasta scores: E(): 1.9e-05%2C 26.77 38d in 310 aa;gbkey=CDS;inference=similar to sequence:INSDC:X79146;product=putative glycosyltransferase;protein_id=CAL10660.1;transl_table=11
AM286415.1	EMBL	sequence_feature	619350	619865	.	-	.	ID=id1041;Note=Pfam match to entry PF00534 Glycos_transf_1%2CGlycosyl transferases group 1%2C score 21.3%2C E-value 1.2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00534
AM286415.1	EMBL	gene	620654	622363	.	-	.	ID=gene550;Name=YE0544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0544
AM286415.1	EMBL	CDS	620654	622363	.	-	0	ID=cds516;Parent=gene550;Dbxref=EnsemblGenomes-Gn:YE0544,EnsemblGenomes-Tr:CAL10661,GOA:A1JJ71,InterPro:IPR003696,UniProtKB/TrEMBL:A1JJ71,NCBI_GP:CAL10661.1;Name=CAL10661.1;Note=Similar in parts to many transferases: Rhizobium sp. nodulation protein NolO or Y4hD SWALL:NOLO_RHISN (SWALL:P55474) (680 aa) fasta scores: E(): 1.1e-44%2C 32.94 id in 607 aa and Ralstonia solanacearum putative transferase protein Rsp0788 or rs01919 SWALL:Q8XRP3 (EMBL:AL646080) (581 aa) fasta scores: E(): 2.7e-42%2C35.71 38d in 490 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P55474;product=putative transferase;protein_id=CAL10661.1;transl_table=11
AM286415.1	EMBL	sequence_feature	620870	622051	.	-	.	ID=id1042;Note=Pfam match to entry PF02543 CmcH_NodU%2CCarbamoyltransferase%2C score 280.5%2C E-value 1.4e-81;gbkey=misc_feature;inference=protein motif:PFAM:PF02543
AM286415.1	EMBL	gene	622394	623896	.	-	.	ID=gene551;Name=YE0545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0545
AM286415.1	EMBL	CDS	622394	623896	.	-	0	ID=cds517;Parent=gene551;Dbxref=EnsemblGenomes-Gn:YE0545,EnsemblGenomes-Tr:CAL10662,UniProtKB/TrEMBL:A1JJ72,NCBI_GP:CAL10662.1;Name=CAL10662.1;Note=Similar to Streptomyces griseus NADH:N-amidino-scyllo-inosamine oxidoreductase lying within the streptomycin biosynthetic operon StsB SWALL:P72455 (EMBL:Y08763) (489 aa) fasta scores: E(): 2.8e-30%2C 31.45 38d in 461 aa;gbkey=CDS;inference=similar to sequence:INSDC:Y08763;product=putative oxidoreductase;protein_id=CAL10662.1;transl_table=11
AM286415.1	EMBL	gene	623925	625358	.	-	.	ID=gene552;Name=YE0546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0546
AM286415.1	EMBL	CDS	623925	625358	.	-	0	ID=cds518;Parent=gene552;Dbxref=EnsemblGenomes-Gn:YE0546,EnsemblGenomes-Tr:CAL10663,UniProtKB/TrEMBL:A1JJ73,NCBI_GP:CAL10663.1;Name=CAL10663.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10663.1;transl_table=11
AM286415.1	EMBL	gene	625375	626550	.	-	.	ID=gene553;Name=YE0547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0547
AM286415.1	EMBL	CDS	625375	626550	.	-	0	ID=cds519;Parent=gene553;Dbxref=EnsemblGenomes-Gn:YE0547,EnsemblGenomes-Tr:CAL10664,GOA:A1JJ74,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JJ74,NCBI_GP:CAL10664.1;Name=CAL10664.1;Note=Similar to many possible membrane transport proteins including: Rhizobium meliloti putative transport protein R03272 or smc03889 SWALL:Q92L18 (EMBL:AL591793) (379 aa) fasta scores: E(): 3.1e-24%2C 26.75 38d in 385 aa%2CYersinia pestis putative membrane protein Ypo1221 SWALL:Q8ZGR2 (EMBL:AJ414147) (384 aa) fasta scores: E(): 4e-19%2C 26.12 38d in 379 aa and to Borrelia burgdorferi multidrug-efflux transporter Bbi26 SWALL:O50880 (EMBL:AE000789) (392 aa) fasta scores: E(): 2e-05%2C 22.42 id in 388 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591793;product=putative membrane transport protein;protein_id=CAL10664.1;transl_table=11
AM286415.1	EMBL	sequence_feature	626458	626517	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	626362	626430	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	626275	626343	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	626179	626247	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	626074	626142	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	626002	626061	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	625855	625923	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	625759	625827	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	625672	625740	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	625594	625662	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	625489	625557	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	625399	625461	.	-	.	ID=id1043;Note=12 probable transmembrane helices predicted for YE0547 by TMHMM2.0 at aa 12-31%2C 41-63%2C 70-92%2C 102-124%2C137-159%2C 164-183%2C 210-232%2C 242-264%2C 271-293%2C 297-319%2C332-354 and 364-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	626577	627443	.	-	.	ID=gene554;Name=YE0548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0548
AM286415.1	EMBL	CDS	626577	627443	.	-	0	ID=cds520;Parent=gene554;Dbxref=EnsemblGenomes-Gn:YE0548,EnsemblGenomes-Tr:CAL10665,InterPro:IPR018724,UniProtKB/TrEMBL:A1JJ75,NCBI_GP:CAL10665.1;Name=CAL10665.1;Note=Similar to Anabaena sp. hypothetical protein All3084 all3084 SWALL:Q8YSK1 (EMBL:AP003591) (222 aa) fasta scores: E(): 1.2e-06%2C 29.24 38d in 212 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003591;product=conserved hypothetical protein;protein_id=CAL10665.1;transl_table=11
AM286415.1	EMBL	gene	627938	629023	.	+	.	ID=gene555;Name=YE0549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0549
AM286415.1	EMBL	CDS	627938	629023	.	+	0	ID=cds521;Parent=gene555;Dbxref=EnsemblGenomes-Gn:YE0549,EnsemblGenomes-Tr:CAL10666,GOA:A1JJ76,InterPro:IPR000070,InterPro:IPR011050,InterPro:IPR012334,PDB:3UW0,UniProtKB/TrEMBL:A1JJ76,NCBI_GP:CAL10666.1;Name=CAL10666.1;gbkey=CDS;product=putative pectinesterase;protein_id=CAL10666.1;transl_table=11
AM286415.1	EMBL	sequence_feature	627953	629008	.	+	.	ID=id1044;Note=Pfam match to entry PF01095 Pectinesterase%2CPectinesterase%2C score 386.1%2C E-value 2.3e-113;gbkey=misc_feature;inference=protein motif:PFAM:PF01095
AM286415.1	EMBL	gene	629026	630945	.	-	.	ID=gene556;Name=dhaR;gbkey=Gene;gene=dhaR;gene_biotype=protein_coding;locus_tag=YE0550
AM286415.1	EMBL	CDS	629026	630945	.	-	0	ID=cds522;Parent=gene556;Dbxref=EnsemblGenomes-Gn:YE0550,EnsemblGenomes-Tr:CAL10667,GOA:A1JJ77,InterPro:IPR000014,InterPro:IPR002078,InterPro:IPR002197,InterPro:IPR003018,InterPro:IPR009057,InterPro:IPR013767,InterPro:IPR025662,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJ77,NCBI_GP:CAL10667.1;Name=CAL10667.1;Note=Similar to Escherichia coli glycerol metabolism operon regulatory protein DhaR or b1201 SWALL:DHAR_ECOLI (SWALL:P76016) (639 aa) fasta scores: E(): 3.7e-126%2C52.08 38d in 624 aa and Citrobacter freundii glycerol metabolism operon regulatory protein DhaR SWALL:DHAR_CITFR (SWALL:P45512) (641 aa) fasta scores: E(): 1.2e-126%2C52.91 38d in 618 aa;gbkey=CDS;gene=dhaR;inference=similar to sequence:UniProtKB:P76016;product=glycerol metabolism operon regulatory protein;protein_id=CAL10667.1;transl_table=11
AM286415.1	EMBL	sequence_feature	629074	629196	.	-	.	ID=id1045;Note=Pfam match to entry PF02954 HTH_8%2C Bacterial regulatory protein%2C Fis family%2C score 41.8%2C E-value 9.8e-10;gbkey=misc_feature;gene=dhaR;inference=protein motif:PFAM:PF02954
AM286415.1	EMBL	sequence_feature	629080	629145	.	-	.	ID=id1046;Note=Predicted helix-turn-helix motif with score 1109.000%2C SD 2.96 at aa 601-622%2C sequence GQLNEMATLLGIGRTTLWRKVK;gbkey=misc_feature;gene=dhaR
AM286415.1	EMBL	sequence_feature	629326	629979	.	-	.	ID=id1047;Note=Pfam match to entry PF00158 Sigma54_activat%2CSigma-54 interaction domain%2C score 248.5%2C E-value 5.9e-72;gbkey=misc_feature;gene=dhaR;inference=protein motif:PFAM:PF00158
AM286415.1	EMBL	sequence_feature	629596	629643	.	-	.	ID=id1048;Note=PS00063 Aldo/keto reductase family putative active site signature.;gbkey=misc_feature;gene=dhaR;inference=protein motif:Prosite:PS00063
AM286415.1	EMBL	sequence_feature	629866	629907	.	-	.	ID=id1049;Note=PS00675 Sigma-54 interaction domain ATP-binding region A signature.;gbkey=misc_feature;gene=dhaR;inference=protein motif:Prosite:PS00675
AM286415.1	EMBL	sequence_feature	630160	630351	.	-	.	ID=id1050;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 36.2%2C E-value 4.9e-08;gbkey=misc_feature;gene=dhaR;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	gene	630932	631966	.	-	.	ID=gene557;Name=scrR;gbkey=Gene;gene=scrR;gene_biotype=protein_coding;locus_tag=YE0550A
AM286415.1	EMBL	CDS	630932	631966	.	-	0	ID=cds523;Parent=gene557;Dbxref=EnsemblGenomes-Gn:YE0550A,EnsemblGenomes-Tr:CAL10668,GOA:A1JJ78,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR012781,InterPro:IPR028082,UniProtKB/TrEMBL:A1JJ78,NCBI_GP:CAL10668.1;Name=CAL10668.1;Note=Similar to Klebsiella pneumoniae sucrose operon repressor ScrR SWALL:SCRR_KLEPN (SWALL:P37076) (334 aa) fasta scores: E(): 2e-87%2C 64.79 38d in 338 aa and Salmonella typhimurium sucrose operon repressor ScrR SWALL:SCRR_SALTY (SWALL:P37077) (334 aa) fasta scores: E(): 3.6e-87%2C 64.77 38d in 335 aa;gbkey=CDS;gene=scrR;inference=similar to sequence:UniProtKB:P37077;product=sucrose operon repressor;protein_id=CAL10668.1;transl_table=11
AM286415.1	EMBL	gene	632013	633422	.	-	.	ID=gene558;Name=scrB;gbkey=Gene;gene=scrB;gene_biotype=protein_coding;locus_tag=YE0551
AM286415.1	EMBL	CDS	632013	633422	.	-	0	ID=cds524;Parent=gene558;Dbxref=EnsemblGenomes-Gn:YE0551,EnsemblGenomes-Tr:CAL10669,GOA:A1JJ79,InterPro:IPR001362,InterPro:IPR006232,InterPro:IPR013148,InterPro:IPR013189,InterPro:IPR013320,InterPro:IPR018053,InterPro:IPR023296,UniProtKB/TrEMBL:A1JJ79,NCBI_GP:CAL10669.1;Name=CAL10669.1;Note=Similar to Klebsiella pneumoniae sucrose-6-phosphate hydrolase ScrB SWALL:SCRB_KLEPN (SWALL:P27217) (465 aa) fasta scores: E(): 1.2e-113%2C56.31 38d in 467 aa and Salmonella typhimurium sucrose-6-phosphate hydrolase ScrB SWALL:SCRB_SALTY (SWALL:P37075) (466 aa) fasta scores: E(): 5e-112%2C 54.58 id in 469 aa;gbkey=CDS;gene=scrB;inference=similar to sequence:UniProtKB:P37075;product=sucrose-6-phosphate hydrolase;protein_id=CAL10669.1;transl_table=11
AM286415.1	EMBL	sequence_feature	632127	633332	.	-	.	ID=id1051;Note=Pfam match to entry PF00251 Glyco_hydro_32%2CGlycosyl hydrolases family 32%2C score 558.1%2C E-value 3.9e-165;gbkey=misc_feature;gene=scrB;inference=protein motif:PFAM:PF00251
AM286415.1	EMBL	sequence_feature	633291	633332	.	-	.	ID=id1052;Note=PS00609 Glycosyl hydrolases family 32 active site.;gbkey=misc_feature;gene=scrB;inference=protein motif:Prosite:PS00609
AM286415.1	EMBL	gene	633422	634792	.	-	.	ID=gene559;Name=scrA;gbkey=Gene;gene=scrA;gene_biotype=protein_coding;locus_tag=YE0552
AM286415.1	EMBL	CDS	633422	634792	.	-	0	ID=cds525;Parent=gene559;Dbxref=EnsemblGenomes-Gn:YE0552,EnsemblGenomes-Tr:CAL10670,GOA:A1JJ80,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR004719,InterPro:IPR010973,InterPro:IPR013013,InterPro:IPR018113,UniProtKB/TrEMBL:A1JJ80,NCBI_GP:CAL10670.1;Name=CAL10670.1;Note=Similar to Salmonella typhimurium PTS system%2Csucrose-specific IIbc component ScrA SWALL:PTSB_SALTY (SWALL:P08470) (456 aa) fasta scores: E(): 1.7e-140%2C83.11 38d in 456 aa and Klebsiella pneumoniae PTS system%2Csucrose-specific IIbc component ScrA SWALL:PTSB_KLEPN (SWALL:P27219) (456 aa) fasta scores: E(): 1.9e-140%2C82.45 38d in 456 aa;gbkey=CDS;gene=scrA;inference=similar to sequence:UniProtKB:P27219;product=PTSsystem%2C sucrose-specific IIbc component;protein_id=CAL10670.1;transl_table=11
AM286415.1	EMBL	sequence_feature	634403	634471	.	-	.	ID=id1053;Note=10 probable transmembrane helices predicted for YE0552 by TMHMM2.0 at aa 108-130%2C 145-167%2C 174-196%2C211-233%2C 245-267%2C 282-304%2C 317-339%2C 359-381%2C 388-407 and 427-449;gbkey=misc_feature;gene=scrA;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	634292	634360	.	-	.	ID=id1053;Note=10 probable transmembrane helices predicted for YE0552 by TMHMM2.0 at aa 108-130%2C 145-167%2C 174-196%2C211-233%2C 245-267%2C 282-304%2C 317-339%2C 359-381%2C 388-407 and 427-449;gbkey=misc_feature;gene=scrA;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	634205	634273	.	-	.	ID=id1053;Note=10 probable transmembrane helices predicted for YE0552 by TMHMM2.0 at aa 108-130%2C 145-167%2C 174-196%2C211-233%2C 245-267%2C 282-304%2C 317-339%2C 359-381%2C 388-407 and 427-449;gbkey=misc_feature;gene=scrA;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	634094	634162	.	-	.	ID=id1053;Note=10 probable transmembrane helices predicted for YE0552 by TMHMM2.0 at aa 108-130%2C 145-167%2C 174-196%2C211-233%2C 245-267%2C 282-304%2C 317-339%2C 359-381%2C 388-407 and 427-449;gbkey=misc_feature;gene=scrA;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	633992	634060	.	-	.	ID=id1053;Note=10 probable transmembrane helices predicted for YE0552 by TMHMM2.0 at aa 108-130%2C 145-167%2C 174-196%2C211-233%2C 245-267%2C 282-304%2C 317-339%2C 359-381%2C 388-407 and 427-449;gbkey=misc_feature;gene=scrA;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	633881	633949	.	-	.	ID=id1053;Note=10 probable transmembrane helices predicted for YE0552 by TMHMM2.0 at aa 108-130%2C 145-167%2C 174-196%2C211-233%2C 245-267%2C 282-304%2C 317-339%2C 359-381%2C 388-407 and 427-449;gbkey=misc_feature;gene=scrA;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	633776	633844	.	-	.	ID=id1053;Note=10 probable transmembrane helices predicted for YE0552 by TMHMM2.0 at aa 108-130%2C 145-167%2C 174-196%2C211-233%2C 245-267%2C 282-304%2C 317-339%2C 359-381%2C 388-407 and 427-449;gbkey=misc_feature;gene=scrA;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	633650	633718	.	-	.	ID=id1053;Note=10 probable transmembrane helices predicted for YE0552 by TMHMM2.0 at aa 108-130%2C 145-167%2C 174-196%2C211-233%2C 245-267%2C 282-304%2C 317-339%2C 359-381%2C 388-407 and 427-449;gbkey=misc_feature;gene=scrA;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	633572	633631	.	-	.	ID=id1053;Note=10 probable transmembrane helices predicted for YE0552 by TMHMM2.0 at aa 108-130%2C 145-167%2C 174-196%2C211-233%2C 245-267%2C 282-304%2C 317-339%2C 359-381%2C 388-407 and 427-449;gbkey=misc_feature;gene=scrA;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	633446	633514	.	-	.	ID=id1053;Note=10 probable transmembrane helices predicted for YE0552 by TMHMM2.0 at aa 108-130%2C 145-167%2C 174-196%2C211-233%2C 245-267%2C 282-304%2C 317-339%2C 359-381%2C 388-407 and 427-449;gbkey=misc_feature;gene=scrA;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	633605	634468	.	-	.	ID=id1054;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 311.5%2C E-value 6.7e-91;gbkey=misc_feature;gene=scrA;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	sequence_feature	634154	634201	.	-	.	ID=id1055;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;gene=scrA;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	sequence_feature	634670	634774	.	-	.	ID=id1056;Note=Pfam match to entry PF00367 PTS_EIIB%2Cphosphotransferase system%2C EIIB%2C score 74.2%2C E-value 1.8e-19;gbkey=misc_feature;gene=scrA;inference=protein motif:PFAM:PF00367
AM286415.1	EMBL	sequence_feature	634685	634738	.	-	.	ID=id1057;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;gene=scrA;inference=protein motif:Prosite:PS01035
AM286415.1	EMBL	sequence_feature	634715	634732	.	-	.	ID=id1058;Note=PS00134 Serine proteases%2C trypsin family%2C histidine active site.;gbkey=misc_feature;gene=scrA;inference=protein motif:Prosite:PS00134
AM286415.1	EMBL	gene	634860	636398	.	-	.	ID=gene560;Name=scrY;gbkey=Gene;gene=scrY;gene_biotype=protein_coding;locus_tag=YE0553
AM286415.1	EMBL	CDS	634860	636398	.	-	0	ID=cds526;Parent=gene560;Dbxref=EnsemblGenomes-Gn:YE0553,EnsemblGenomes-Tr:CAL10671,GOA:A1JJ81,InterPro:IPR003192,InterPro:IPR021570,UniProtKB/TrEMBL:A1JJ81,NCBI_GP:CAL10671.1;Name=CAL10671.1;Note=Similar to Salmonella typhimurium sucrose porin precursor ScrY SWALL:SCRY_SALTY (SWALL:P22340) (505 aa) fasta scores: E(): 2.7e-129%2C 65.43 38d in 512 aa and Klebsiella pneumoniae sucrose porin precursor ScrY SWALL:SCRY_KLEPN (SWALL:P27218) (505 aa) fasta scores: E(): 2.7e-127%2C 64.85 38d in 515 aa;gbkey=CDS;gene=scrY;inference=similar to sequence:UniProtKB:P27218;product=sucrose porin;protein_id=CAL10671.1;transl_table=11
AM286415.1	EMBL	sequence_feature	634863	636101	.	-	.	ID=id1059;Note=Pfam match to entry PF02264 LamB%2C LamB porin %2Cscore 535.1%2C E-value 3.3e-158;gbkey=misc_feature;gene=scrY;inference=protein motif:PFAM:PF02264
AM286415.1	EMBL	sequence_feature	635394	635441	.	-	.	ID=id1060;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;gene=scrY;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	sequence_feature	636345	636377	.	-	.	ID=id1061;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=scrY;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	636697	637632	.	-	.	ID=gene561;Name=scrK;gbkey=Gene;gene=scrK;gene_biotype=protein_coding;locus_tag=YE0554
AM286415.1	EMBL	CDS	636697	637632	.	-	0	ID=cds527;Parent=gene561;Dbxref=EnsemblGenomes-Gn:YE0554,EnsemblGenomes-Tr:CAL10672,GOA:A1JJ82,InterPro:IPR002139,InterPro:IPR002173,InterPro:IPR011611,InterPro:IPR029056,UniProtKB/TrEMBL:A1JJ82,NCBI_GP:CAL10672.1;Name=CAL10672.1;Note=Similar to Klebsiella pneumoniae fructokinase ScrK SWALL:SCRK_KLEPN (SWALL:P26420) (307 aa) fasta scores: E(): 9.3e-69%2C 59.28 38d in 307 aa and Salmonella typhimurium fructokinase ScrK SWALL:SCRK_SALTY (SWALL:P26984) (307 aa) fasta scores: E(): 1e-66%2C 59.4 38d in 303 aa;gbkey=CDS;gene=scrK;inference=similar to sequence:UniProtKB:P26984;product=fructokinase;protein_id=CAL10672.1;transl_table=11
AM286415.1	EMBL	sequence_feature	636733	637629	.	-	.	ID=id1062;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 343.5%2C E-value 1.5e-100;gbkey=misc_feature;gene=scrK;inference=protein motif:PFAM:PF00294
AM286415.1	EMBL	sequence_feature	636859	636900	.	-	.	ID=id1063;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;gbkey=misc_feature;gene=scrK;inference=protein motif:Prosite:PS00584
AM286415.1	EMBL	sequence_feature	637477	637551	.	-	.	ID=id1064;Note=PS00583 pfkB family of carbohydrate kinases signature 1.;gbkey=misc_feature;gene=scrK;inference=protein motif:Prosite:PS00583
AM286415.1	EMBL	gene	637836	638981	.	+	.	ID=gene562;Name=YE0555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0555
AM286415.1	EMBL	CDS	637836	638981	.	+	0	ID=cds528;Parent=gene562;Dbxref=EnsemblGenomes-Gn:YE0555,EnsemblGenomes-Tr:CAL10673,InterPro:IPR002491,UniProtKB/TrEMBL:A1JJ83,NCBI_GP:CAL10673.1;Name=CAL10673.1;Note=Similar to many transport proteins including: Rhizobium meliloti putative transport transmembrane protein R02271 or smc01659 SWALL:Q92ND7 (EMBL:AL591790) (377 aa) fasta scores: E(): 3.3e-39%2C 32.79 38d in 372 aa and Methanosarcina acetivorans Fe FecC or ma2148 SWALL:AAM05546 (EMBL:AE010901) (389 aa) fasta scores: E(): 7.3e-37%2C 31.75 38d in 381 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591790;product=putative iron transporter;protein_id=CAL10673.1;transl_table=11
AM286415.1	EMBL	sequence_feature	637860	637928	.	+	.	ID=id1065;Note=1 probable transmembrane helix predicted for YE0555 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	638037	638837	.	+	.	ID=id1066;Note=Pfam match to entry PF01497 Peripla_BP_2%2CPeriplasmic binding protein%2C score -0.2%2C E-value 1.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01497
AM286415.1	EMBL	gene	639479	641635	.	+	.	ID=gene563;Name=YE0556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0556
AM286415.1	EMBL	CDS	639479	641635	.	+	0	ID=cds529;Parent=gene563;Dbxref=EnsemblGenomes-Gn:YE0556,EnsemblGenomes-Tr:CAL10674,GOA:A1JJ84,InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR010916,InterPro:IPR010917,InterPro:IPR012910,UniProtKB/TrEMBL:A1JJ84,NCBI_GP:CAL10674.1;Name=CAL10674.1;Note=Similar to Escherichia coli iron(III) dicitrate transport system FecA or b4291 SWALL:FECA_ECOLI (SWALL:P13036) (774 aa) fasta scores: E(): 8.4e-78%2C 44.65 id in 701 aa%2C and to Pseudomonas aeruginosa probable Tonb-dependent receptor Pa3268 SWALL:Q9HYX3 (EMBL:AE004749) (721 aa) fasta scores: E(): 1.4e-135%2C55.75 38d in 739 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P13036;product=putative iron transporter;protein_id=CAL10674.1;transl_table=11
AM286415.1	EMBL	sequence_feature	639479	639628	.	+	.	ID=id1067;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	sequence_feature	641279	641632	.	+	.	ID=id1068;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 50.3%2C E-value 2.7e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	sequence_feature	641579	641632	.	+	.	ID=id1069;Note=PS01156 TonB-dependent receptor proteins signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01156
AM286415.1	EMBL	gene	642071	643171	.	-	.	ID=gene564;Name=hmsT;gbkey=Gene;gene=hmsT;gene_biotype=protein_coding;locus_tag=YE0557
AM286415.1	EMBL	CDS	642071	643171	.	-	0	ID=cds530;Parent=gene564;Dbxref=EnsemblGenomes-Gn:YE0557,EnsemblGenomes-Tr:CAL10675,InterPro:IPR000160,InterPro:IPR029787,UniProtKB/TrEMBL:A1JJ85,NCBI_GP:CAL10675.1;Name=CAL10675.1;gbkey=CDS;gene=hmsT;product=HmsT protein;protein_id=CAL10675.1;transl_table=11
AM286415.1	EMBL	sequence_feature	642119	642598	.	-	.	ID=id1070;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 205.8%2C E-value 4.3e-59;gbkey=misc_feature;gene=hmsT;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	643040	643108	.	-	.	ID=id1071;Note=5 probable transmembrane helices predicted for YE0557 by TMHMM2.0 at aa 22-44%2C 49-71%2C 78-95%2C 110-132 and 149-171;gbkey=misc_feature;gene=hmsT;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	642959	643027	.	-	.	ID=id1071;Note=5 probable transmembrane helices predicted for YE0557 by TMHMM2.0 at aa 22-44%2C 49-71%2C 78-95%2C 110-132 and 149-171;gbkey=misc_feature;gene=hmsT;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	642887	642940	.	-	.	ID=id1071;Note=5 probable transmembrane helices predicted for YE0557 by TMHMM2.0 at aa 22-44%2C 49-71%2C 78-95%2C 110-132 and 149-171;gbkey=misc_feature;gene=hmsT;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	642776	642844	.	-	.	ID=id1071;Note=5 probable transmembrane helices predicted for YE0557 by TMHMM2.0 at aa 22-44%2C 49-71%2C 78-95%2C 110-132 and 149-171;gbkey=misc_feature;gene=hmsT;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	642659	642727	.	-	.	ID=id1071;Note=5 probable transmembrane helices predicted for YE0557 by TMHMM2.0 at aa 22-44%2C 49-71%2C 78-95%2C 110-132 and 149-171;gbkey=misc_feature;gene=hmsT;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	643558	643782	.	+	.	ID=gene565;Name=YE0558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0558
AM286415.1	EMBL	CDS	643558	643782	.	+	0	ID=cds531;Parent=gene565;Dbxref=EnsemblGenomes-Gn:YE0558,EnsemblGenomes-Tr:CAL10676,InterPro:IPR009885,UniProtKB/TrEMBL:A1JJ86,NCBI_GP:CAL10676.1;Name=CAL10676.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10676.1;transl_table=11
AM286415.1	EMBL	sequence_feature	643576	643629	.	+	.	ID=id1072;Note=3 probable transmembrane helices predicted for YE0558 by TMHMM2.0 at aa 7-24%2C 28-47 and 54-73;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	643639	643698	.	+	.	ID=id1072;Note=3 probable transmembrane helices predicted for YE0558 by TMHMM2.0 at aa 7-24%2C 28-47 and 54-73;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	643717	643776	.	+	.	ID=id1072;Note=3 probable transmembrane helices predicted for YE0558 by TMHMM2.0 at aa 7-24%2C 28-47 and 54-73;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	643860	643946	.	-	.	ID=gene566;Name=tRNA-Leu (CAG);gbkey=Gene;gene=tRNA-Leu (CAG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	643860	643946	.	-	.	ID=rna41;Parent=gene566;gbkey=tRNA;gene=tRNA-Leu (CAG);product=tRNA-Leu
AM286415.1	EMBL	exon	643860	643946	.	-	.	ID=id1073;Parent=rna41;gbkey=tRNA;gene=tRNA-Leu (CAG);product=tRNA-Leu
AM286415.1	EMBL	gene	644011	644097	.	-	.	ID=gene567;Name=tRNA-Leu (CAG);gbkey=Gene;gene=tRNA-Leu (CAG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	644011	644097	.	-	.	ID=rna42;Parent=gene567;gbkey=tRNA;gene=tRNA-Leu (CAG);product=tRNA-Leu
AM286415.1	EMBL	exon	644011	644097	.	-	.	ID=id1074;Parent=rna42;gbkey=tRNA;gene=tRNA-Leu (CAG);product=tRNA-Leu
AM286415.1	EMBL	gene	644247	645335	.	-	.	ID=gene568;Name=YE0559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0559
AM286415.1	EMBL	CDS	644247	645335	.	-	0	ID=cds532;Parent=gene568;Dbxref=EnsemblGenomes-Gn:YE0559,EnsemblGenomes-Tr:CAL10677,GOA:A1JJ87,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJ87,NCBI_GP:CAL10677.1;Name=CAL10677.1;gbkey=CDS;product=LysR-family regulatory protein;protein_id=CAL10677.1;transl_table=11
AM286415.1	EMBL	sequence_feature	644289	644915	.	-	.	ID=id1075;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 140.5%2C E-value 1.9e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	644985	645164	.	-	.	ID=id1076;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 80.7%2C E-value 1.9e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	645030	645122	.	-	.	ID=id1077;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	645060	645125	.	-	.	ID=id1078;Note=Predicted helix-turn-helix motif with score 1439.000%2C SD 4.09 at aa 71-92%2C sequence GSFSRAAEKLQLPRATVSHTLK;gbkey=misc_feature
AM286415.1	EMBL	gene	645290	646282	.	+	.	ID=gene569;Name=YE0560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0560
AM286415.1	EMBL	CDS	645290	646282	.	+	0	ID=cds533;Parent=gene569;Dbxref=EnsemblGenomes-Gn:YE0560,EnsemblGenomes-Tr:CAL10678,InterPro:IPR001395,InterPro:IPR023210,UniProtKB/TrEMBL:A1JJ88,NCBI_GP:CAL10678.1;Name=CAL10678.1;Note=Similar to many including: Pseudomonas aeruginosa probable oxidoreductase Pa2535 SWALL:Q9I0U9 (EMBL:AE004681) (331 aa) fasta scores: E(): 4.9e-90%2C68.48 38d in 330 aa and to Salmonella typhi putative aldo/keto reductase Sty0158 SWALL:Q8Z9G1 (EMBL:AL627265) (329 aa) fasta scores: E(): 2.8e-84%2C 65.04 38d in 329 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627265;product=putative oxidoreductase;protein_id=CAL10678.1;transl_table=11
AM286415.1	EMBL	sequence_feature	645308	646228	.	+	.	ID=id1079;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 225.8%2C E-value 4.1e-65;gbkey=misc_feature;inference=protein motif:PFAM:PF00248
AM286415.1	EMBL	gene	646301	647344	.	-	.	ID=gene570;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;gene_synonym=b4371;locus_tag=YE0561
AM286415.1	EMBL	CDS	646301	647344	.	-	0	ID=cds534;Parent=gene570;Dbxref=EnsemblGenomes-Gn:YE0561,EnsemblGenomes-Tr:CAL10679,GOA:A1JJ89,InterPro:IPR002052,InterPro:IPR007848,InterPro:IPR013675,InterPro:IPR023543,InterPro:IPR029063,NCBI_GP:CAL10679.1;Name=CAL10679.1;gbkey=CDS;gene=rsmC;product=ribosomal RNA small subunit methyltransferase C;protein_id=CAL10679.1;transl_table=11
AM286415.1	EMBL	sequence_feature	646532	646552	.	-	.	ID=id1080;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;gene=rsmC;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	647457	647894	.	+	.	ID=gene571;Name=holD;gbkey=Gene;gene=holD;gene_biotype=protein_coding;gene_synonym=b4372;locus_tag=YE0562
AM286415.1	EMBL	CDS	647457	647894	.	+	0	ID=cds535;Parent=gene571;Dbxref=EnsemblGenomes-Gn:YE0562,EnsemblGenomes-Tr:CAL10680,GOA:A1JJ90,InterPro:IPR004615,UniProtKB/TrEMBL:A1JJ90,NCBI_GP:CAL10680.1;Name=CAL10680.1;gbkey=CDS;gene=holD;product=DNA polymerase III%2C psi subunit;protein_id=CAL10680.1;transl_table=11
AM286415.1	EMBL	sequence_feature	647460	647768	.	+	.	ID=id1081;Note=Pfam match to entry PF03603 DNA_III_psi%2C DNA polymerase III psi subunit%2C score 141.7%2C E-value 8.2e-40;gbkey=misc_feature;gene=holD;inference=protein motif:PFAM:PF03603
AM286415.1	EMBL	gene	647839	648282	.	+	.	ID=gene572;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;gene_synonym=b4373;locus_tag=YE0563
AM286415.1	EMBL	CDS	647839	648282	.	+	0	ID=cds536;Parent=gene572;Dbxref=EnsemblGenomes-Gn:YE0563,EnsemblGenomes-Tr:CAL10681,GOA:A1JJ91,InterPro:IPR000182,InterPro:IPR006464,InterPro:IPR016181,UniProtKB/TrEMBL:A1JJ91,NCBI_GP:CAL10681.1;Name=CAL10681.1;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine acetyltransferase;protein_id=CAL10681.1;transl_table=11
AM286415.1	EMBL	sequence_feature	647965	648201	.	+	.	ID=id1082;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 72.8%2C E-value 4.6e-19;gbkey=misc_feature;gene=rimI;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	648533	650122	.	+	.	ID=gene573;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;gene_synonym=b4375,miaD,tos;locus_tag=YE0564
AM286415.1	EMBL	CDS	648533	650122	.	+	0	ID=cds537;Parent=gene573;Dbxref=EnsemblGenomes-Gn:YE0564,EnsemblGenomes-Tr:CAL10682,GOA:A1JJ92,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR004548,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009022,InterPro:IPR027417,NCBI_GP:CAL10682.1;Name=CAL10682.1;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=CAL10682.1;transl_table=11
AM286415.1	EMBL	sequence_feature	648563	649372	.	+	.	ID=id1083;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu GTP binding domain%2C score 211.6%2C E-value 7.7e-61;gbkey=misc_feature;gene=prfC;inference=protein motif:PFAM:PF00009
AM286415.1	EMBL	sequence_feature	648704	648751	.	+	.	ID=id1084;Note=PS00301 GTP-binding elongation factors signature.;gbkey=misc_feature;gene=prfC;inference=protein motif:Prosite:PS00301
AM286415.1	EMBL	sequence_feature	649424	649672	.	+	.	ID=id1085;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 71.1%2C E-value 1.5e-18;gbkey=misc_feature;gene=prfC;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	gene	650433	651047	.	+	.	ID=gene574;Name=osmY;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;gene_synonym=b4376;locus_tag=YE0565
AM286415.1	EMBL	CDS	650433	651047	.	+	0	ID=cds538;Parent=gene574;Dbxref=EnsemblGenomes-Gn:YE0565,EnsemblGenomes-Tr:CAL10683,InterPro:IPR007055,InterPro:IPR014004,UniProtKB/TrEMBL:A1JJ93,NCBI_GP:CAL10683.1;Name=CAL10683.1;gbkey=CDS;gene=osmY;product=osmotically inducible protein Y;protein_id=CAL10683.1;transl_table=11
AM286415.1	EMBL	gene	651616	652869	.	+	.	ID=gene575;Name=YE0567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0567
AM286415.1	EMBL	CDS	651616	652869	.	+	0	ID=cds539;Parent=gene575;Dbxref=EnsemblGenomes-Gn:YE0567,EnsemblGenomes-Tr:CAL10684,GOA:A1JJ94,InterPro:IPR002641,InterPro:IPR016035,UniProtKB/TrEMBL:A1JJ94,NCBI_GP:CAL10684.1;Name=CAL10684.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10684.1;transl_table=11
AM286415.1	EMBL	sequence_feature	651697	652206	.	+	.	ID=id1086;Note=Pfam match to entry PF01734 Patatin%2C Patatin-like phospholipase%2C score 97.5%2C E-value 1.7e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF01734
AM286415.1	EMBL	gene	652890	653687	.	+	.	ID=gene576;Name=YE0568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0568
AM286415.1	EMBL	CDS	652890	653687	.	+	0	ID=cds540;Parent=gene576;Dbxref=EnsemblGenomes-Gn:YE0568,EnsemblGenomes-Tr:CAL10685,GOA:A1JJ95,InterPro:IPR001130,InterPro:IPR018228,UniProtKB/TrEMBL:A1JJ95,NCBI_GP:CAL10685.1;Name=CAL10685.1;gbkey=CDS;product=putative metalloenzyme;protein_id=CAL10685.1;transl_table=11
AM286415.1	EMBL	sequence_feature	652899	652925	.	+	.	ID=id1087;Note=PS01137 Uncharacterized protein family UPF0006 signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS01137
AM286415.1	EMBL	sequence_feature	652914	653657	.	+	.	ID=id1088;Note=Pfam match to entry PF01026 TatD_DNase%2C TatD related DNase%2C score 289.4%2C E-value 3e-84;gbkey=misc_feature;inference=protein motif:PFAM:PF01026
AM286415.1	EMBL	sequence_feature	653334	653351	.	+	.	ID=id1089;Note=PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide.;gbkey=misc_feature;inference=protein motif:Prosite:PS00343
AM286415.1	EMBL	gene	653889	655160	.	+	.	ID=gene577;Name=YE0569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0569
AM286415.1	EMBL	CDS	653889	655160	.	+	0	ID=cds541;Parent=gene577;Dbxref=EnsemblGenomes-Gn:YE0569,EnsemblGenomes-Tr:CAL10686,GOA:A1JJ96,InterPro:IPR002668,InterPro:IPR008276,InterPro:IPR011642,InterPro:IPR011657,InterPro:IPR018270,UniProtKB/TrEMBL:A1JJ96,NCBI_GP:CAL10686.1;Name=CAL10686.1;gbkey=CDS;product=putative Na+ dependent nucleoside transporter-family protein;protein_id=CAL10686.1;transl_table=11
AM286415.1	EMBL	sequence_feature	653889	655151	.	+	.	ID=id1090;Note=Pfam match to entry PF01773 Nucleoside_tra2%2C Na+ dependent nucleoside transporter%2C score 773.0%2C E-value 7.9e-230;gbkey=misc_feature;inference=protein motif:PFAM:PF01773
AM286415.1	EMBL	sequence_feature	653901	653954	.	+	.	ID=id1091;Note=10 probable transmembrane helices predicted for YE0569 by TMHMM2.0 at aa 5-22%2C 27-49%2C 64-81%2C 94-116%2C171-190%2C 197-219%2C 265-287%2C 296-313%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	653967	654035	.	+	.	ID=id1091;Note=10 probable transmembrane helices predicted for YE0569 by TMHMM2.0 at aa 5-22%2C 27-49%2C 64-81%2C 94-116%2C171-190%2C 197-219%2C 265-287%2C 296-313%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	654078	654131	.	+	.	ID=id1091;Note=10 probable transmembrane helices predicted for YE0569 by TMHMM2.0 at aa 5-22%2C 27-49%2C 64-81%2C 94-116%2C171-190%2C 197-219%2C 265-287%2C 296-313%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	654168	654236	.	+	.	ID=id1091;Note=10 probable transmembrane helices predicted for YE0569 by TMHMM2.0 at aa 5-22%2C 27-49%2C 64-81%2C 94-116%2C171-190%2C 197-219%2C 265-287%2C 296-313%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	654399	654458	.	+	.	ID=id1091;Note=10 probable transmembrane helices predicted for YE0569 by TMHMM2.0 at aa 5-22%2C 27-49%2C 64-81%2C 94-116%2C171-190%2C 197-219%2C 265-287%2C 296-313%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	654477	654545	.	+	.	ID=id1091;Note=10 probable transmembrane helices predicted for YE0569 by TMHMM2.0 at aa 5-22%2C 27-49%2C 64-81%2C 94-116%2C171-190%2C 197-219%2C 265-287%2C 296-313%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	654681	654749	.	+	.	ID=id1091;Note=10 probable transmembrane helices predicted for YE0569 by TMHMM2.0 at aa 5-22%2C 27-49%2C 64-81%2C 94-116%2C171-190%2C 197-219%2C 265-287%2C 296-313%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	654774	654827	.	+	.	ID=id1091;Note=10 probable transmembrane helices predicted for YE0569 by TMHMM2.0 at aa 5-22%2C 27-49%2C 64-81%2C 94-116%2C171-190%2C 197-219%2C 265-287%2C 296-313%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	654975	655043	.	+	.	ID=id1091;Note=10 probable transmembrane helices predicted for YE0569 by TMHMM2.0 at aa 5-22%2C 27-49%2C 64-81%2C 94-116%2C171-190%2C 197-219%2C 265-287%2C 296-313%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	655080	655148	.	+	.	ID=id1091;Note=10 probable transmembrane helices predicted for YE0569 by TMHMM2.0 at aa 5-22%2C 27-49%2C 64-81%2C 94-116%2C171-190%2C 197-219%2C 265-287%2C 296-313%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	655540	656337	.	+	.	ID=gene578;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;gene_synonym=dra,thyR;locus_tag=YE0570
AM286415.1	EMBL	CDS	655540	656337	.	+	0	ID=cds542;Parent=gene578;Dbxref=EnsemblGenomes-Gn:YE0570,EnsemblGenomes-Tr:CAL10687,GOA:A1JJ97,InterPro:IPR002915,InterPro:IPR011343,InterPro:IPR013785,InterPro:IPR023649,UniProtKB/TrEMBL:A1JJ97,NCBI_GP:CAL10687.1;Name=CAL10687.1;gbkey=CDS;gene=deoC;product=deoxyribose-phosphate aldolase;protein_id=CAL10687.1;transl_table=11
AM286415.1	EMBL	sequence_feature	655582	656256	.	+	.	ID=id1092;Note=Pfam match to entry PF01791 DeoC%2CDeoxyribose-phosphate aldolase%2C score 304.5%2C E-value 8.4e-89;gbkey=misc_feature;gene=deoC;inference=protein motif:PFAM:PF01791
AM286415.1	EMBL	gene	656425	657747	.	+	.	ID=gene579;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=YE0571
AM286415.1	EMBL	CDS	656425	657747	.	+	0	ID=cds543;Parent=gene579;Dbxref=EnsemblGenomes-Gn:YE0571,EnsemblGenomes-Tr:CAL10688,GOA:A1JJ98,InterPro:IPR000053,InterPro:IPR000312,InterPro:IPR013102,InterPro:IPR013465,InterPro:IPR017459,InterPro:IPR017872,InterPro:IPR018090,NCBI_GP:CAL10688.1;Name=CAL10688.1;Note=Highly similar to Escherichia coli thymidine phosphorylase DeoA or B4382 SWALL:TYPH_ECOLI (SWALL:P07650) (440 aa) fasta scores: E(): 1.6e-140%2C84.31 38d in 440 aa and to Salmonella typhimurium and Salmonella typhi thymidine phosphorylase DeoA or Stm4568 or Sty4919 SWALL:Q8XF46 (EMBL:AE008915) (440 aa) fasta scores: E(): 2.8e-142%2C 86.36 38d in 440 aa;gbkey=CDS;gene=deoA;inference=similar to sequence:UniProtKB:P07650;product=thymidine phosphorylase;protein_id=CAL10688.1;transl_table=11
AM286415.1	EMBL	sequence_feature	656428	656628	.	+	.	ID=id1093;Note=Pfam match to entry PF02885 Glycos_trans_3N%2CGlycosyl transferase family%2C helical bundle domain%2C score 83.7%2C E-value 2.4e-22;gbkey=misc_feature;gene=deoA;inference=protein motif:PFAM:PF02885
AM286415.1	EMBL	sequence_feature	656656	657423	.	+	.	ID=id1094;Note=Pfam match to entry PF00591 Glycos_transf_3%2CGlycosyl transferase family%2C a/b domain%2C score 271.8%2CE-value 5.7e-79;gbkey=misc_feature;gene=deoA;inference=protein motif:PFAM:PF00591
AM286415.1	EMBL	sequence_feature	656761	656808	.	+	.	ID=id1095;Note=PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature.;gbkey=misc_feature;gene=deoA;inference=protein motif:Prosite:PS00647
AM286415.1	EMBL	gene	657801	659024	.	+	.	ID=gene580;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;gene_synonym=b4383,drm,thyR;locus_tag=YE0572
AM286415.1	EMBL	CDS	657801	659024	.	+	0	ID=cds544;Parent=gene580;Dbxref=EnsemblGenomes-Gn:YE0572,EnsemblGenomes-Tr:CAL10689,GOA:A1JJ99,InterPro:IPR006124,InterPro:IPR010045,InterPro:IPR017849,InterPro:IPR017850,InterPro:IPR024052,NCBI_GP:CAL10689.1;Name=CAL10689.1;gbkey=CDS;gene=deoB;product=phosphopentomutase;protein_id=CAL10689.1;transl_table=11
AM286415.1	EMBL	sequence_feature	658626	658955	.	+	.	ID=id1096;Note=Pfam match to entry PF01676 Metalloenzyme%2CMetalloenzyme superfamily%2C score 162.4%2C E-value 5e-46;gbkey=misc_feature;gene=deoB;inference=protein motif:PFAM:PF01676
AM286415.1	EMBL	gene	659248	659973	.	+	.	ID=gene581;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;gene_synonym=b4384,pup;locus_tag=YE0574
AM286415.1	EMBL	CDS	659248	659973	.	+	0	ID=cds545;Parent=gene581;Dbxref=EnsemblGenomes-Gn:YE0574,EnsemblGenomes-Tr:CAL10690,GOA:A1JJA0,InterPro:IPR000845,InterPro:IPR004402,InterPro:IPR018016,InterPro:IPR018017,NCBI_GP:CAL10690.1;Name=CAL10690.1;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=CAL10690.1;transl_table=11
AM286415.1	EMBL	sequence_feature	659290	659946	.	+	.	ID=id1097;Note=Pfam match to entry PF01048 PNP_UDP_1%2CPhosphorylase family%2C score 383.8%2C E-value 1.1e-112;gbkey=misc_feature;gene=deoD;inference=protein motif:PFAM:PF01048
AM286415.1	EMBL	sequence_feature	659431	659478	.	+	.	ID=id1098;Note=PS01232 Purine and other phosphorylases family 1 signature.;gbkey=misc_feature;gene=deoD;inference=protein motif:Prosite:PS01232
AM286415.1	EMBL	gene	660151	661494	.	+	.	ID=gene582;Name=YE0575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0575
AM286415.1	EMBL	CDS	660151	661494	.	+	0	ID=cds546;Parent=gene582;Dbxref=EnsemblGenomes-Gn:YE0575,EnsemblGenomes-Tr:CAL10691,GOA:A1JJA1,InterPro:IPR001845,InterPro:IPR011991,InterPro:IPR012893,InterPro:IPR012894,UniProtKB/TrEMBL:A1JJA1,NCBI_GP:CAL10691.1;Name=CAL10691.1;Note=Similar to Escherichia coli hypothetical protein YjjJ or B4385 SWALL:YJJJ_ECOLI (SWALL:P39410) (443 aa) fasta scores: E(): 7.3e-75%2C 46.56 38d in 451 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P39410;product=putative DNA-binding protein;protein_id=CAL10691.1;transl_table=11
AM286415.1	EMBL	sequence_feature	660187	660252	.	+	.	ID=id1099;Note=Predicted helix-turn-helix motif with score 1767.000%2C SD 5.21 at aa 13-34%2C sequence MTASSLAQALATSQPTISRQLT;gbkey=misc_feature
AM286415.1	EMBL	gene	661521	662198	.	-	.	ID=gene583;Name=smp;gbkey=Gene;gene=smp;gene_biotype=protein_coding;locus_tag=YE0576
AM286415.1	EMBL	CDS	661521	662198	.	-	0	ID=cds547;Parent=gene583;Dbxref=EnsemblGenomes-Gn:YE0576,EnsemblGenomes-Tr:CAL10692,InterPro:IPR019305,UniProtKB/TrEMBL:A1JJA2,NCBI_GP:CAL10692.1;Name=CAL10692.1;gbkey=CDS;gene=smp;product=putative membrane protein;protein_id=CAL10692.1;transl_table=11
AM286415.1	EMBL	sequence_feature	662094	662162	.	-	.	ID=id1100;Note=2 probable transmembrane helices predicted for YE0576 by TMHMM2.0 at aa 13-35 and 164-186;gbkey=misc_feature;gene=smp;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	661641	661709	.	-	.	ID=id1100;Note=2 probable transmembrane helices predicted for YE0576 by TMHMM2.0 at aa 13-35 and 164-186;gbkey=misc_feature;gene=smp;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	662434	663414	.	+	.	ID=gene584;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;gene_synonym=b4388;locus_tag=YE0578
AM286415.1	EMBL	CDS	662434	663414	.	+	0	ID=cds548;Parent=gene584;Dbxref=EnsemblGenomes-Gn:YE0578,EnsemblGenomes-Tr:CAL10693,GOA:A1JJA4,InterPro:IPR004469,InterPro:IPR006383,InterPro:IPR023190,InterPro:IPR023214,UniProtKB/TrEMBL:A1JJA4,NCBI_GP:CAL10693.1;Name=CAL10693.1;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=CAL10693.1;transl_table=11
AM286415.1	EMBL	sequence_feature	662764	663315	.	+	.	ID=id1101;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 93.6%2C E-value 2.6e-25;gbkey=misc_feature;gene=serB;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	663442	664827	.	+	.	ID=gene585;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;gene_synonym=b4389,sms;locus_tag=YE0579
AM286415.1	EMBL	CDS	663442	664827	.	+	0	ID=cds549;Parent=gene585;Dbxref=EnsemblGenomes-Gn:YE0579,EnsemblGenomes-Tr:CAL10694,GOA:A1JJA5,InterPro:IPR003593,InterPro:IPR004504,InterPro:IPR014721,InterPro:IPR020568,InterPro:IPR020588,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJA5,NCBI_GP:CAL10694.1;Name=CAL10694.1;gbkey=CDS;gene=radA;product=DNA repair protein RadA;protein_id=CAL10694.1;transl_table=11
AM286415.1	EMBL	sequence_feature	663748	663771	.	+	.	ID=id1102;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=radA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	664901	666184	.	+	.	ID=gene586;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;gene_synonym=b4390,nadI,pnuA;locus_tag=YE0580
AM286415.1	EMBL	CDS	664901	666184	.	+	0	ID=cds550;Parent=gene586;Dbxref=EnsemblGenomes-Gn:YE0580,EnsemblGenomes-Tr:CAL10695,GOA:A1JJA6,InterPro:IPR001387,InterPro:IPR004821,InterPro:IPR006417,InterPro:IPR010982,InterPro:IPR014729,InterPro:IPR016429,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJA6,NCBI_GP:CAL10695.1;Name=CAL10695.1;gbkey=CDS;gene=nadR;product=transcriptional regulator NadR;protein_id=CAL10695.1;transl_table=11
AM286415.1	EMBL	sequence_feature	664919	665086	.	+	.	ID=id1103;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 38.0%2C E-value 1.4e-08;gbkey=misc_feature;gene=nadR;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	664946	665011	.	+	.	ID=id1104;Note=Predicted helix-turn-helix motif with score 1877.000%2C SD 5.58 at aa 16-37%2C sequence CTLQQVADASGMTKGYLSQLLN;gbkey=misc_feature;gene=nadR
AM286415.1	EMBL	sequence_feature	665090	665206	.	+	.	ID=id1105;Note=Pfam match to entry PF01467 CTP_transf_2%2CCytidylyltransferase%2C score 28.3%2C E-value 1.5e-07;gbkey=misc_feature;gene=nadR;inference=protein motif:PFAM:PF01467
AM286415.1	EMBL	sequence_feature	665612	665635	.	+	.	ID=id1106;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=nadR;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	665615	665638	.	+	.	ID=id1107;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=misc_feature;gene=nadR;inference=protein motif:Prosite:PS00687
AM286415.1	EMBL	gene	666181	667182	.	-	.	ID=gene587;Name=YE0581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0581
AM286415.1	EMBL	CDS	666181	667182	.	-	0	ID=cds551;Parent=gene587;Dbxref=EnsemblGenomes-Gn:YE0581,EnsemblGenomes-Tr:CAL10696,GOA:A1JJA7,InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013154,InterPro:IPR014182,InterPro:IPR016040,UniProtKB/TrEMBL:A1JJA7,NCBI_GP:CAL10696.1;Name=CAL10696.1;Note=Similar to several including: Bacillus halodurans alginate lyase Bh0738 SWALL:Q9KEW1 (EMBL:AP001509) (339 aa) fasta scores: E(): 1.5e-53%2C 49.11 38d in 338 aa and to Pseudomonas aeruginosa probable oxidoreductase Pa3567 SWALL:Q9HY50 (EMBL:AE004777) (337 aa) fasta scores: E(): 4.9e-52%2C 46.13 38d in 336 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP001509;product=putative oxidoreductase;protein_id=CAL10696.1;transl_table=11
AM286415.1	EMBL	sequence_feature	666184	667161	.	-	.	ID=id1108;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenase%2C score 149.4%2C E-value 4e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF00107
AM286415.1	EMBL	gene	667345	668256	.	+	.	ID=gene588;Name=YE0582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0582
AM286415.1	EMBL	CDS	667345	668256	.	+	0	ID=cds552;Parent=gene588;Dbxref=EnsemblGenomes-Gn:YE0582,EnsemblGenomes-Tr:CAL10697,GOA:A1JJA8,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJA8,NCBI_GP:CAL10697.1;Name=CAL10697.1;Note=Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa3135 SWALL:Q9HZ90 (EMBL:AE004737) (306 aa) fasta scores: E(): 4.8e-32%2C 36.8 id in 307 aa%2C and to Rhizobium loti transcriptional regulator Mlr7606 SWALL:Q985M8 (EMBL:AP003012) (299 aa) fasta scores: E(): 4.8e-30%2C 37.11 38d in 291 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003012;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL10697.1;transl_table=11
AM286415.1	EMBL	sequence_feature	667357	667536	.	+	.	ID=id1109;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 85.5%2C E-value 7.1e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	667396	667461	.	+	.	ID=id1110;Note=Predicted helix-turn-helix motif with score 1537.000%2C SD 4.42 at aa 18-39%2C sequence GSFTRAAAMVGLPKSSVSQRIS;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	667399	667491	.	+	.	ID=id1111;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	667606	668217	.	+	.	ID=id1112;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 147.6%2C E-value 1.4e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	668337	669467	.	+	.	ID=gene589;Name=YE0583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0583
AM286415.1	EMBL	CDS	668337	669467	.	+	0	ID=cds553;Parent=gene589;Dbxref=EnsemblGenomes-Gn:YE0583,EnsemblGenomes-Tr:CAL10698,InterPro:IPR003812,InterPro:IPR011991,InterPro:IPR025230,UniProtKB/TrEMBL:A1JJA9,NCBI_GP:CAL10698.1;Name=CAL10698.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10698.1;transl_table=11
AM286415.1	EMBL	gene	669527	671173	.	-	.	ID=gene590;Name=YE0584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0584
AM286415.1	EMBL	CDS	669527	671173	.	-	0	ID=cds554;Parent=gene590;Dbxref=EnsemblGenomes-Gn:YE0584,EnsemblGenomes-Tr:CAL10699,GOA:A1JJB0,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR022374,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJB0,NCBI_GP:CAL10699.1;Name=CAL10699.1;Note=Similar to many ABC-family transport proteins including: Escherichia coli%2C and Escherichia coli O157:H7 ABC transporter ATP-binding protein YjjK or b4391 or z5993 or ecs5349 SWALL:YJJK_ECOLI (SWALL:P37797) (554 aa) fasta scores: E(): 2.3e-155%2C 89.96 38d in 548 aa and to Salmonella typhimurium putative ABC superfamily YjjK or Stm4581 SWALL:Q8ZJU9 (EMBL:AE008915) (555 aa) fasta scores: E(): 4e-155%2C 89.59 38d in 548 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37797;product=ABC transporter protein%2C ATP-binding component;protein_id=CAL10699.1;transl_table=11
AM286415.1	EMBL	sequence_feature	669644	670150	.	-	.	ID=id1113;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 172.4%2C E-value 4.8e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	670106	670129	.	-	.	ID=id1114;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	670490	671086	.	-	.	ID=id1115;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 172.3%2C E-value 5.3e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	670664	670708	.	-	.	ID=id1116;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	671057	671080	.	-	.	ID=id1117;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	671835	672344	.	-	.	ID=gene591;Name=YE0585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0585
AM286415.1	EMBL	CDS	671835	672344	.	-	0	ID=cds555;Parent=gene591;Dbxref=EnsemblGenomes-Gn:YE0585,EnsemblGenomes-Tr:CAL10700,GOA:A1JJB1,InterPro:IPR006664,InterPro:IPR006665,UniProtKB/TrEMBL:A1JJB1,NCBI_GP:CAL10700.1;Name=CAL10700.1;Note=Similar to many lipoproteins including: Yersinia pestis putative lipoprotein Ypo0448 SWALL:Q8ZIP6 (EMBL:AJ414142) (168 aa) fasta scores: E(): 7.5e-47%2C75.59 38d in 168 aa and to Escherichia coli putative lipoprotein YfiB or b2605 SWALL:YFIB_ECOLI (SWALL:P07021) (160 aa) fasta scores: E(): 8.2e-23%2C 47.29 38d in 148 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P07021;product=putative lipoprotein;protein_id=CAL10700.1;transl_table=11
AM286415.1	EMBL	sequence_feature	671865	672152	.	-	.	ID=id1118;Note=Pfam match to entry PF00691 OmpA%2C OmpA family %2Cscore 109.2%2C E-value 5.2e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF00691
AM286415.1	EMBL	sequence_feature	672283	672311	.	-	.	ID=id1119;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	672355	673578	.	-	.	ID=gene592;Name=YE0586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0586
AM286415.1	EMBL	CDS	672355	673578	.	-	0	ID=cds556;Parent=gene592;Dbxref=EnsemblGenomes-Gn:YE0586,EnsemblGenomes-Tr:CAL10701,GOA:A1JJB2,InterPro:IPR000160,InterPro:IPR003660,InterPro:IPR029787,UniProtKB/TrEMBL:A1JJB2,NCBI_GP:CAL10701.1;Name=CAL10701.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10701.1;transl_table=11
AM286415.1	EMBL	sequence_feature	672433	672918	.	-	.	ID=id1120;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 213.2%2C E-value 2.5e-61;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	672952	673164	.	-	.	ID=id1121;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 44.3%2C E-value 1.8e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	673501	673569	.	-	.	ID=id1122;Note=2 probable transmembrane helices predicted for YE0586 by TMHMM2.0 at aa 4-26 and 131-153;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	673120	673188	.	-	.	ID=id1122;Note=2 probable transmembrane helices predicted for YE0586 by TMHMM2.0 at aa 4-26 and 131-153;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	673677	674309	.	-	.	ID=gene593;Name=YE0587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0587
AM286415.1	EMBL	CDS	673677	674309	.	-	0	ID=cds557;Parent=gene593;Dbxref=EnsemblGenomes-Gn:YE0587,EnsemblGenomes-Tr:CAL10702,InterPro:IPR025293,UniProtKB/TrEMBL:A1JJB3,NCBI_GP:CAL10702.1;Name=CAL10702.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10702.1;transl_table=11
AM286415.1	EMBL	sequence_feature	674160	674228	.	-	.	ID=id1123;Note=1 probable transmembrane helix predicted for YE0587 by TMHMM2.0 at aa 28-50;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	674513	677158	.	-	.	ID=gene594;Name=YE0588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0588
AM286415.1	EMBL	CDS	674513	677158	.	-	0	ID=cds558;Parent=gene594;Dbxref=EnsemblGenomes-Gn:YE0588,EnsemblGenomes-Tr:CAL10703,GOA:A1JJB4,InterPro:IPR001757,InterPro:IPR004014,InterPro:IPR006068,InterPro:IPR008250,InterPro:IPR018303,InterPro:IPR023214,InterPro:IPR023298,InterPro:IPR023299,UniProtKB/TrEMBL:A1JJB4,NCBI_GP:CAL10703.1;Name=CAL10703.1;gbkey=CDS;product=putative cation-transporting P-type ATPase;protein_id=CAL10703.1;transl_table=11
AM286415.1	EMBL	sequence_feature	674531	674956	.	-	.	ID=id1124;Note=Pfam match to entry PF00689 Cation_ATPase_C%2C Cation transporting ATPase%2C C-terminus%2C score 80.3%2C E-value 2.6e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00689
AM286415.1	EMBL	sequence_feature	676973	677041	.	-	.	ID=id1125;Note=10 probable transmembrane helices predicted for YE0588 by TMHMM2.0 at aa 40-62%2C 66-88%2C 232-254%2C 264-286%2C677-699%2C 703-725%2C 748-770%2C 780-799%2C 812-834 and 849-868;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	676895	676963	.	-	.	ID=id1125;Note=10 probable transmembrane helices predicted for YE0588 by TMHMM2.0 at aa 40-62%2C 66-88%2C 232-254%2C 264-286%2C677-699%2C 703-725%2C 748-770%2C 780-799%2C 812-834 and 849-868;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	676397	676465	.	-	.	ID=id1125;Note=10 probable transmembrane helices predicted for YE0588 by TMHMM2.0 at aa 40-62%2C 66-88%2C 232-254%2C 264-286%2C677-699%2C 703-725%2C 748-770%2C 780-799%2C 812-834 and 849-868;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	676301	676369	.	-	.	ID=id1125;Note=10 probable transmembrane helices predicted for YE0588 by TMHMM2.0 at aa 40-62%2C 66-88%2C 232-254%2C 264-286%2C677-699%2C 703-725%2C 748-770%2C 780-799%2C 812-834 and 849-868;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	675062	675130	.	-	.	ID=id1125;Note=10 probable transmembrane helices predicted for YE0588 by TMHMM2.0 at aa 40-62%2C 66-88%2C 232-254%2C 264-286%2C677-699%2C 703-725%2C 748-770%2C 780-799%2C 812-834 and 849-868;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	674984	675052	.	-	.	ID=id1125;Note=10 probable transmembrane helices predicted for YE0588 by TMHMM2.0 at aa 40-62%2C 66-88%2C 232-254%2C 264-286%2C677-699%2C 703-725%2C 748-770%2C 780-799%2C 812-834 and 849-868;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	674849	674917	.	-	.	ID=id1125;Note=10 probable transmembrane helices predicted for YE0588 by TMHMM2.0 at aa 40-62%2C 66-88%2C 232-254%2C 264-286%2C677-699%2C 703-725%2C 748-770%2C 780-799%2C 812-834 and 849-868;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	674762	674821	.	-	.	ID=id1125;Note=10 probable transmembrane helices predicted for YE0588 by TMHMM2.0 at aa 40-62%2C 66-88%2C 232-254%2C 264-286%2C677-699%2C 703-725%2C 748-770%2C 780-799%2C 812-834 and 849-868;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	674657	674725	.	-	.	ID=id1125;Note=10 probable transmembrane helices predicted for YE0588 by TMHMM2.0 at aa 40-62%2C 66-88%2C 232-254%2C 264-286%2C677-699%2C 703-725%2C 748-770%2C 780-799%2C 812-834 and 849-868;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	674555	674614	.	-	.	ID=id1125;Note=10 probable transmembrane helices predicted for YE0588 by TMHMM2.0 at aa 40-62%2C 66-88%2C 232-254%2C 264-286%2C677-699%2C 703-725%2C 748-770%2C 780-799%2C 812-834 and 849-868;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	675242	676225	.	-	.	ID=id1126;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 92.6%2C E-value 5.3e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	676187	676207	.	-	.	ID=id1127;Note=PS00154 E1-E2 ATPases phosphorylation site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00154
AM286415.1	EMBL	sequence_feature	676235	676939	.	-	.	ID=id1128;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 296.3%2C E-value 2.4e-86;gbkey=misc_feature;inference=protein motif:PFAM:PF00122
AM286415.1	EMBL	sequence_feature	676955	677152	.	-	.	ID=id1129;Note=Pfam match to entry PF00690 Cation_ATPase_N%2C Cation transporter/ATPase%2C N-terminus%2C score 76.9%2C E-value 2.7e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00690
AM286415.1	EMBL	gene	677714	679633	.	+	.	ID=gene595;Name=slt;gbkey=Gene;gene=slt;gene_biotype=protein_coding;gene_synonym=sltY;locus_tag=YE0589
AM286415.1	EMBL	CDS	677714	679633	.	+	0	ID=cds559;Parent=gene595;Dbxref=EnsemblGenomes-Gn:YE0589,EnsemblGenomes-Tr:CAL10704,GOA:A1JJB5,InterPro:IPR000189,InterPro:IPR008258,InterPro:IPR008939,InterPro:IPR012289,InterPro:IPR016026,InterPro:IPR023346,UniProtKB/TrEMBL:A1JJB5,NCBI_GP:CAL10704.1;Name=CAL10704.1;gbkey=CDS;gene=slt;product=putative soluble lytic murein transglycosylase;protein_id=CAL10704.1;transl_table=11
AM286415.1	EMBL	sequence_feature	679139	679501	.	+	.	ID=id1130;Note=Pfam match to entry PF01464 SLT%2C Transglycosylase SLT domain%2C score 138.2%2C E-value 9.8e-39;gbkey=misc_feature;gene=slt;inference=protein motif:PFAM:PF01464
AM286415.1	EMBL	sequence_feature	679196	679282	.	+	.	ID=id1131;Note=PS00922 Prokaryotic transglycosylases signature.;gbkey=misc_feature;gene=slt;inference=protein motif:Prosite:PS00922
AM286415.1	EMBL	sequence_feature	679460	679495	.	+	.	ID=id1132;Note=PS01258 Apoptosis regulator%2C Bcl-2 family BH2 domain signature.;gbkey=misc_feature;gene=slt;inference=protein motif:Prosite:PS01258
AM286415.1	EMBL	gene	679880	680212	.	+	.	ID=gene596;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=YE0590
AM286415.1	EMBL	CDS	679880	680212	.	+	0	ID=cds560;Parent=gene596;Dbxref=EnsemblGenomes-Gn:YE0590,EnsemblGenomes-Tr:CAL10705,GOA:A1JJB6,InterPro:IPR000831,InterPro:IPR010921,InterPro:IPR013335,NCBI_GP:CAL10705.1;Name=CAL10705.1;Note=Similar to many proposed trp operon repressors including: Yersinia pestis TrpR or Ypo0453 or y3726 SWALL:TRPR_YERPE (SWALL:P58700) (125 aa) fasta scores: E(): 1e-34%2C 92.07 38d in 101 aa and to Salmonella typhimurium Stm4583 SWALL:TRPR_SALTY (SWALL:P37444) (108 aa) fasta scores: E(): 2.8e-25%2C 69.15 38d in 107 aa;gbkey=CDS;gene=trpR;inference=similar to sequence:UniProtKB:P58700;product=putative trp operon repressor;protein_id=CAL10705.1;transl_table=11
AM286415.1	EMBL	sequence_feature	679952	680191	.	+	.	ID=id1133;Note=Pfam match to entry PF01371 Trp_repressor%2C Trp repressor protein%2C score 159.0%2C E-value 5.2e-45;gbkey=misc_feature;gene=trpR;inference=protein motif:PFAM:PF01371
AM286415.1	EMBL	gene	680221	680748	.	-	.	ID=gene597;Name=YE0591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0591
AM286415.1	EMBL	CDS	680221	680748	.	-	0	ID=cds561;Parent=gene597;Dbxref=EnsemblGenomes-Gn:YE0591,EnsemblGenomes-Tr:CAL10706,GOA:A1JJB7,InterPro:IPR002786,InterPro:IPR026533,InterPro:IPR029001,NCBI_GP:CAL10706.1;Name=CAL10706.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10706.1;transl_table=11
AM286415.1	EMBL	sequence_feature	680239	680733	.	-	.	ID=id1134;Note=Pfam match to entry PF01931 DUF84%2C Protein of unknown function DUF84%2C score 210.1%2C E-value 2.2e-60;gbkey=misc_feature;inference=protein motif:PFAM:PF01931
AM286415.1	EMBL	gene	680805	681452	.	+	.	ID=gene598;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=YE0592
AM286415.1	EMBL	CDS	680805	681452	.	+	0	ID=cds562;Parent=gene598;Dbxref=EnsemblGenomes-Gn:YE0592,EnsemblGenomes-Tr:CAL10707,GOA:A1JJB8,InterPro:IPR001345,InterPro:IPR013078,InterPro:IPR023086,InterPro:IPR029033,NCBI_GP:CAL10707.1;Name=CAL10707.1;gbkey=CDS;gene=gpmB;product=putative phosphoglycerate mutase;protein_id=CAL10707.1;transl_table=11
AM286415.1	EMBL	sequence_feature	680808	681386	.	+	.	ID=id1135;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 210.1%2C E-value 2.2e-60;gbkey=misc_feature;gene=gpmB;inference=protein motif:PFAM:PF00300
AM286415.1	EMBL	sequence_feature	680820	680849	.	+	.	ID=id1136;Note=PS00175 Phosphoglycerate mutase family phosphohistidine signature.;gbkey=misc_feature;gene=gpmB;inference=protein motif:Prosite:PS00175
AM286415.1	EMBL	sequence_feature	681240	681272	.	+	.	ID=id1137;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=gpmB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	681449	682315	.	-	.	ID=gene599;Name=rob;gbkey=Gene;gene=rob;gene_biotype=protein_coding;locus_tag=YE0593
AM286415.1	EMBL	CDS	681449	682315	.	-	0	ID=cds563;Parent=gene599;Dbxref=EnsemblGenomes-Gn:YE0593,EnsemblGenomes-Tr:CAL10708,GOA:A1JJB9,InterPro:IPR009057,InterPro:IPR010499,InterPro:IPR011256,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR020449,InterPro:IPR029442,UniProtKB/TrEMBL:A1JJB9,NCBI_GP:CAL10708.1;Name=CAL10708.1;gbkey=CDS;gene=rob;product=putative right origin-binding protein;protein_id=CAL10708.1;transl_table=11
AM286415.1	EMBL	sequence_feature	682001	682132	.	-	.	ID=id1138;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 45.5%2C E-value 7.8e-11;gbkey=misc_feature;gene=rob;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	682016	682153	.	-	.	ID=id1139;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=rob;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	682151	682288	.	-	.	ID=id1140;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 43.2%2C E-value 3.8e-10;gbkey=misc_feature;gene=rob;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	682540	683010	.	+	.	ID=gene600;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=YE0594
AM286415.1	EMBL	CDS	682540	683010	.	+	0	ID=cds564;Parent=gene600;Dbxref=EnsemblGenomes-Gn:YE0594,EnsemblGenomes-Tr:CAL10709,InterPro:IPR010292,UniProtKB/TrEMBL:A1JJC0,NCBI_GP:CAL10709.1;Name=CAL10709.1;gbkey=CDS;gene=creA;product=putative exported protein;protein_id=CAL10709.1;transl_table=11
AM286415.1	EMBL	gene	683089	683805	.	-	.	ID=gene601;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;gene_synonym=cpxC,dye,fexA,msp,seg,sfrA;locus_tag=YE0595
AM286415.1	EMBL	CDS	683089	683805	.	-	0	ID=cds565;Parent=gene601;Dbxref=EnsemblGenomes-Gn:YE0595,EnsemblGenomes-Tr:CAL10710,GOA:A1JJC2,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JJC2,NCBI_GP:CAL10710.1;Name=CAL10710.1;gbkey=CDS;gene=arcA;product=aerobic respiration control protein;protein_id=CAL10710.1;transl_table=11
AM286415.1	EMBL	sequence_feature	683119	683337	.	-	.	ID=id1141;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 102.0%2C E-value 7.4e-28;gbkey=misc_feature;gene=arcA;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	sequence_feature	683440	683796	.	-	.	ID=id1142;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 121.6%2C E-value 9.7e-34;gbkey=misc_feature;gene=arcA;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	683908	684048	.	+	.	ID=gene602;Name=YE0596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0596
AM286415.1	EMBL	CDS	683908	684048	.	+	0	ID=cds566;Parent=gene602;Dbxref=EnsemblGenomes-Gn:YE0596,EnsemblGenomes-Tr:CAL10711,UniProtKB/TrEMBL:A1JJC3,NCBI_GP:CAL10711.1;Name=CAL10711.1;Note=Similar to Salmonella typhimurium%2C and Salmonella typhi putative inner membrane protein YjjY or stm4599 or sty4948 SWALL:Q8XFA6 (EMBL:AE008916) (46 aa) fasta scores: E(): 1.8e-07%2C 68.88 38d in 45 aa and Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YjjY or b4402 or z6005 or ecs5360 SWALL:YJJY_ECOLI (SWALL:P39412) (46 aa) fasta scores: E(): 1.8e-07%2C 68.88 38d in 45 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P39412;product=conserved hypothetical protein;protein_id=CAL10711.1;transl_table=11
AM286415.1	EMBL	repeat_region	684449	685327	.	-	.	ID=id1143;Note=IS4-like insertion sequence element IS1665;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	684449	684464	.	+	.	ID=id1144;Note=Inverted repeat for IS4-like element;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	stem_loop	684450	684481	.	-	.	ID=id1145;gbkey=stem_loop
AM286415.1	EMBL	gene	684795	685244	.	-	.	ID=gene603;Name=YE0598;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE0598;part=1/2
AM286415.1	EMBL	gene	684458	684793	.	-	.	ID=gene603;Name=YE0598;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE0598;part=2/2
AM286415.1	EMBL	CDS	684795	685244	.	-	0	ID=cds567;Parent=gene603;Dbxref=EnsemblGenomes-Gn:YE0598,EnsemblGenomes-Tr:CAL10712,InterPro:IPR024473,UniProtKB/TrEMBL:A1JJC4,NCBI_GP:CAL10712.1;Name=CAL10712.1;Note=Similar to the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 3.9e-52%2C 50.22 id in 440 aa and to Shigella flexneri IS4 S0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 3.9e-52%2C 48.81 38d in 422 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL10712.1;transl_table=11
AM286415.1	EMBL	CDS	684458	684793	.	-	0	ID=cds567;Parent=gene603;Dbxref=EnsemblGenomes-Gn:YE0598,EnsemblGenomes-Tr:CAL10712,InterPro:IPR024473,UniProtKB/TrEMBL:A1JJC4,NCBI_GP:CAL10712.1;Name=CAL10712.1;Note=Similar to the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 3.9e-52%2C 50.22 id in 440 aa and to Shigella flexneri IS4 S0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 3.9e-52%2C 48.81 38d in 422 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL10712.1;transl_table=11
AM286415.1	EMBL	sequence_feature	684788	684794	.	-	.	ID=id1146;Note=possible site of programmed ribosomal frameshifting;gbkey=misc_feature
AM286415.1	EMBL	gene	685300	686637	.	-	.	ID=gene604;Name=YE0599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0599
AM286415.1	EMBL	CDS	685300	686637	.	-	0	ID=cds568;Parent=gene604;Dbxref=EnsemblGenomes-Gn:YE0599,EnsemblGenomes-Tr:CAL10713,GOA:A1JJC5,InterPro:IPR002559,InterPro:IPR012337,InterPro:IPR024473,UniProtKB/TrEMBL:A1JJC5,NCBI_GP:CAL10713.1;Name=CAL10713.1;Note=Highly similar to many transposases from the IS element IS4 including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 2e-165%2C 89.72 id in 438 aa%2C and to Pantoea agglomerans nsertion element protein SWALL:P71168 (EMBL:X81894) (440 aa) fasta scores: E(): 1.8e-86%2C 52.42 38d in 433 aa. This IS element has been partially disrupted by the insertion of IS1665 removing 19 bp.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1660;protein_id=CAL10713.1;transl_table=11
AM286415.1	EMBL	sequence_feature	685582	686259	.	-	.	ID=id1147;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 160.8%2C E-value 1.5e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	repeat_region	685312	685327	.	-	.	ID=id1148;Note=alternate type inverted repeat for IS4-like element IS1660;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	685313	686720	.	-	.	ID=id1149;Note=IS4-like insertion sequence element IS1660;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	686705	686720	.	-	.	ID=id1150;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	transcript	687073	687191	.	+	.	ID=rna43;Note=Threonine operon leader (RF00506) as predicted by Rfam%2C score 127.28%2C positions 1 to 131;gbkey=misc_RNA
AM286415.1	EMBL	exon	687073	687191	.	+	.	ID=id1151;Parent=rna43;Note=Threonine operon leader (RF00506) as predicted by Rfam%2C score 127.28%2C positions 1 to 131;gbkey=misc_RNA
AM286415.1	EMBL	gene	687253	689712	.	+	.	ID=gene605;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;gene_synonym=thrA1,thrA2;locus_tag=YE0600
AM286415.1	EMBL	CDS	687253	689712	.	+	0	ID=cds569;Parent=gene605;Dbxref=EnsemblGenomes-Gn:YE0600,EnsemblGenomes-Tr:CAL10714,GOA:A1JJC6,InterPro:IPR001048,InterPro:IPR001341,InterPro:IPR001342,InterPro:IPR002912,InterPro:IPR005106,InterPro:IPR011147,InterPro:IPR016040,InterPro:IPR018042,InterPro:IPR019811,InterPro:IPR027795,UniProtKB/TrEMBL:A1JJC6,NCBI_GP:CAL10714.1;Name=CAL10714.1;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase/homoserine dehydrogenase I;protein_id=CAL10714.1;transl_table=11
AM286415.1	EMBL	sequence_feature	687253	688104	.	+	.	ID=id1152;Note=Pfam match to entry PF00696 aakinase%2C Amino acid kinase family%2C score 203.6%2C E-value 2e-58;gbkey=misc_feature;gene=thrA;inference=protein motif:PFAM:PF00696
AM286415.1	EMBL	sequence_feature	687259	687285	.	+	.	ID=id1153;Note=PS00324 Aspartokinase signature.;gbkey=misc_feature;gene=thrA;inference=protein motif:Prosite:PS00324
AM286415.1	EMBL	sequence_feature	688198	688407	.	+	.	ID=id1154;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 43.6%2C E-value 2.8e-10;gbkey=misc_feature;gene=thrA;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	sequence_feature	688441	688656	.	+	.	ID=id1155;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 40.0%2C E-value 3.6e-09;gbkey=misc_feature;gene=thrA;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	sequence_feature	688687	689088	.	+	.	ID=id1156;Note=Pfam match to entry PF03447 NAD_binding_3%2CHomoserine dehydrogenase%2C NAD binding domain%2C score 175.8%2C E-value 4.6e-50;gbkey=misc_feature;gene=thrA;inference=protein motif:PFAM:PF03447
AM286415.1	EMBL	sequence_feature	689092	689682	.	+	.	ID=id1157;Note=Pfam match to entry PF00742 Homoserine_dh%2CHomoserine dehydrogenase%2C score 342.9%2C E-value 2.3e-100;gbkey=misc_feature;gene=thrA;inference=protein motif:PFAM:PF00742
AM286415.1	EMBL	sequence_feature	689230	689298	.	+	.	ID=id1158;Note=PS01042 Homoserine dehydrogenase signature.;gbkey=misc_feature;gene=thrA;inference=protein motif:Prosite:PS01042
AM286415.1	EMBL	gene	689715	690644	.	+	.	ID=gene606;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=YE0601
AM286415.1	EMBL	CDS	689715	690644	.	+	0	ID=cds570;Parent=gene606;Dbxref=EnsemblGenomes-Gn:YE0601,EnsemblGenomes-Tr:CAL10715,GOA:A1JJC7,InterPro:IPR000870,InterPro:IPR006203,InterPro:IPR006204,InterPro:IPR013750,InterPro:IPR014721,InterPro:IPR020568,NCBI_GP:CAL10715.1;Name=CAL10715.1;gbkey=CDS;gene=thrB;product=homoserine kinase;protein_id=CAL10715.1;transl_table=11
AM286415.1	EMBL	sequence_feature	689715	690638	.	+	.	ID=id1159;Note=Pfam match to entry PF00288 GHMP_kinases%2C GHMP kinases putative ATP-binding protein%2C score 235.3%2CE-value 5.8e-68;gbkey=misc_feature;gene=thrB;inference=protein motif:PFAM:PF00288
AM286415.1	EMBL	sequence_feature	689982	690017	.	+	.	ID=id1160;Note=PS00627 GHMP kinases putative ATP-binding domain.;gbkey=misc_feature;gene=thrB;inference=protein motif:Prosite:PS00627
AM286415.1	EMBL	sequence_feature	689985	690017	.	+	.	ID=id1161;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=thrB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	690648	691937	.	+	.	ID=gene607;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=YE0602
AM286415.1	EMBL	CDS	690648	691937	.	+	0	ID=cds571;Parent=gene607;Dbxref=EnsemblGenomes-Gn:YE0602,EnsemblGenomes-Tr:CAL10716,GOA:A1JJC8,InterPro:IPR000634,InterPro:IPR001926,InterPro:IPR004450,InterPro:IPR029144,UniProtKB/TrEMBL:A1JJC8,NCBI_GP:CAL10716.1;Name=CAL10716.1;gbkey=CDS;gene=thrC;product=threonine synthase;protein_id=CAL10716.1;transl_table=11
AM286415.1	EMBL	sequence_feature	690876	691781	.	+	.	ID=id1162;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 135.2%2CE-value 7.7e-38;gbkey=misc_feature;gene=thrC;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	sequence_feature	690936	690980	.	+	.	ID=id1163;Note=PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=thrC;inference=protein motif:Prosite:PS00165
AM286415.1	EMBL	gene	692084	692860	.	-	.	ID=gene608;Name=YE0603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0603
AM286415.1	EMBL	CDS	692084	692860	.	-	0	ID=cds572;Parent=gene608;Dbxref=EnsemblGenomes-Gn:YE0603,EnsemblGenomes-Tr:CAL10717,InterPro:IPR005583,NCBI_GP:CAL10717.1;Name=CAL10717.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10717.1;transl_table=11
AM286415.1	EMBL	sequence_feature	692093	692860	.	-	.	ID=id1164;Note=Pfam match to entry PF03883 DUF328%2C Protein of unknown function (DUF328)%2C score 576.6%2C E-value 1e-170;gbkey=misc_feature;inference=protein motif:PFAM:PF03883
AM286415.1	EMBL	gene	693271	694224	.	+	.	ID=gene609;Name=talB;gbkey=Gene;gene=talB;gene_biotype=protein_coding;locus_tag=YE0604
AM286415.1	EMBL	CDS	693271	694224	.	+	0	ID=cds573;Parent=gene609;Dbxref=EnsemblGenomes-Gn:YE0604,EnsemblGenomes-Tr:CAL10718,GOA:A1JJD0,InterPro:IPR001585,InterPro:IPR004730,InterPro:IPR013785,InterPro:IPR018225,NCBI_GP:CAL10718.1;Name=CAL10718.1;gbkey=CDS;gene=talB;product=transaldolase B;protein_id=CAL10718.1;transl_table=11
AM286415.1	EMBL	sequence_feature	693307	694209	.	+	.	ID=id1165;Note=Pfam match to entry PF00923 Transaldolase%2CTransaldolase%2C score 584.9%2C E-value 3.2e-173;gbkey=misc_feature;gene=talB;inference=protein motif:PFAM:PF00923
AM286415.1	EMBL	sequence_feature	693361	693387	.	+	.	ID=id1166;Note=PS01054 Transaldolase signature 1.;gbkey=misc_feature;gene=talB;inference=protein motif:Prosite:PS01054
AM286415.1	EMBL	sequence_feature	693655	693708	.	+	.	ID=id1167;Note=PS00958 Transaldolase active site.;gbkey=misc_feature;gene=talB;inference=protein motif:Prosite:PS00958
AM286415.1	EMBL	gene	694381	694968	.	+	.	ID=gene610;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;gene_synonym=chlG,mog;locus_tag=YE0605
AM286415.1	EMBL	CDS	694381	694968	.	+	0	ID=cds574;Parent=gene610;Dbxref=EnsemblGenomes-Gn:YE0605,EnsemblGenomes-Tr:CAL10719,GOA:A1JJD1,InterPro:IPR001453,InterPro:IPR008284,InterPro:IPR020817,UniProtKB/TrEMBL:A1JJD1,NCBI_GP:CAL10719.1;Name=CAL10719.1;gbkey=CDS;gene=mogA;product=molybdopterin biosynthesis protein;protein_id=CAL10719.1;transl_table=11
AM286415.1	EMBL	sequence_feature	694387	694827	.	+	.	ID=id1168;Note=Pfam match to entry PF00994 MoCF_biosynth%2C Probable molybdopterin binding domain%2C score 144.5%2C E-value 1.2e-40;gbkey=misc_feature;gene=mogA;inference=protein motif:PFAM:PF00994
AM286415.1	EMBL	sequence_feature	694585	694626	.	+	.	ID=id1169;Note=PS01078 Molybdenum cofactor biosynthesis proteins signature 1.;gbkey=misc_feature;gene=mogA;inference=protein motif:Prosite:PS01078
AM286415.1	EMBL	gene	695097	696464	.	+	.	ID=gene611;Name=YE0606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0606
AM286415.1	EMBL	CDS	695097	696464	.	+	0	ID=cds575;Parent=gene611;Dbxref=EnsemblGenomes-Gn:YE0606,EnsemblGenomes-Tr:CAL10720,GOA:A1JJD2,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JJD2,NCBI_GP:CAL10720.1;Name=CAL10720.1;gbkey=CDS;product=putative transport protein;protein_id=CAL10720.1;transl_table=11
AM286415.1	EMBL	sequence_feature	695097	695162	.	+	.	ID=id1170;Note=Predicted helix-turn-helix motif with score 981.000%2C SD 2.53 at aa 1-22%2C sequence MPQEHNSSQVDLSQPHVAQQHN;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	695196	696428	.	+	.	ID=id1171;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 78.6%2C E-value 8.5e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	695199	695267	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	695325	695393	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	695430	695498	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	695511	695579	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	695604	695672	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	695715	695774	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	695877	695945	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	695988	696056	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	696075	696128	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	696156	696224	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	696258	696326	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	696336	696404	.	+	.	ID=id1172;Note=12 probable transmembrane helices predicted for YE0606 by TMHMM2.0 at aa 35-57%2C 77-99%2C 112-134%2C 139-161%2C170-192%2C 207-226%2C 261-283%2C 298-320%2C 327-344%2C 354-376%2C388-410 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	696003	696035	.	+	.	ID=id1173;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	696532	698982	.	-	.	ID=gene612;Name=YE0607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0607
AM286415.1	EMBL	CDS	696532	698982	.	-	0	ID=cds576;Parent=gene612;Dbxref=EnsemblGenomes-Gn:YE0607,EnsemblGenomes-Tr:CAL10721,InterPro:IPR001064,InterPro:IPR011024,InterPro:IPR016181,UniProtKB/TrEMBL:A1JJD3,NCBI_GP:CAL10721.1;Name=CAL10721.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10721.1;transl_table=11
AM286415.1	EMBL	sequence_feature	696550	696810	.	-	.	ID=id1174;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 19.1%2C E-value 0.0064;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	sequence_feature	698731	698778	.	-	.	ID=id1175;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	sequence_feature	698860	698907	.	-	.	ID=id1176;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	gene	699221	699814	.	-	.	ID=gene613;Name=yaaH;gbkey=Gene;gene=yaaH;gene_biotype=protein_coding;locus_tag=YE0608
AM286415.1	EMBL	CDS	699221	699814	.	-	0	ID=cds577;Parent=gene613;Dbxref=EnsemblGenomes-Gn:YE0608,EnsemblGenomes-Tr:CAL10722,GOA:A1JJD4,InterPro:IPR000791,UniProtKB/TrEMBL:A1JJD4,NCBI_GP:CAL10722.1;Name=CAL10722.1;gbkey=CDS;gene=yaaH;product=putative membrane protein;protein_id=CAL10722.1;transl_table=11
AM286415.1	EMBL	sequence_feature	699251	699814	.	-	.	ID=id1177;Note=Pfam match to entry PF01184 Grp1_Fun34_YaaH%2CGPR1/FUN34/yaaH family%2C score 322.5%2C E-value 3.1e-94;gbkey=misc_feature;gene=yaaH;inference=protein motif:PFAM:PF01184
AM286415.1	EMBL	sequence_feature	699656	699724	.	-	.	ID=id1178;Note=5 probable transmembrane helices predicted for YE0608 by TMHMM2.0 at aa 31-53%2C 63-85%2C 98-120%2C 124-141 and 148-170;gbkey=misc_feature;gene=yaaH;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	699560	699628	.	-	.	ID=id1178;Note=5 probable transmembrane helices predicted for YE0608 by TMHMM2.0 at aa 31-53%2C 63-85%2C 98-120%2C 124-141 and 148-170;gbkey=misc_feature;gene=yaaH;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	699455	699523	.	-	.	ID=id1178;Note=5 probable transmembrane helices predicted for YE0608 by TMHMM2.0 at aa 31-53%2C 63-85%2C 98-120%2C 124-141 and 148-170;gbkey=misc_feature;gene=yaaH;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	699392	699445	.	-	.	ID=id1178;Note=5 probable transmembrane helices predicted for YE0608 by TMHMM2.0 at aa 31-53%2C 63-85%2C 98-120%2C 124-141 and 148-170;gbkey=misc_feature;gene=yaaH;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	699305	699373	.	-	.	ID=id1178;Note=5 probable transmembrane helices predicted for YE0608 by TMHMM2.0 at aa 31-53%2C 63-85%2C 98-120%2C 124-141 and 148-170;gbkey=misc_feature;gene=yaaH;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	700187	702094	.	+	.	ID=gene614;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;gene_synonym=groP,grpF,seg;locus_tag=YE0609
AM286415.1	EMBL	CDS	700187	702094	.	+	0	ID=cds578;Parent=gene614;Dbxref=EnsemblGenomes-Gn:YE0609,EnsemblGenomes-Tr:CAL10723,GOA:A1JJD5,InterPro:IPR012725,InterPro:IPR013126,InterPro:IPR018181,InterPro:IPR029047,InterPro:IPR029048,NCBI_GP:CAL10723.1;Name=CAL10723.1;gbkey=CDS;gene=dnaK;product=chaperone protein DnaK;protein_id=CAL10723.1;transl_table=11
AM286415.1	EMBL	sequence_feature	700196	701998	.	+	.	ID=id1179;Note=Pfam match to entry PF00012 HSP70%2C Hsp70 protein %2Cscore 1352.3%2C E-value 0;gbkey=misc_feature;gene=dnaK;inference=protein motif:PFAM:PF00012
AM286415.1	EMBL	sequence_feature	700205	700228	.	+	.	ID=id1180;Note=PS00297 Heat shock hsp70 proteins family signature 1.;gbkey=misc_feature;gene=dnaK;inference=protein motif:Prosite:PS00297
AM286415.1	EMBL	sequence_feature	700760	700801	.	+	.	ID=id1181;Note=PS00329 Heat shock hsp70 proteins family signature 2.;gbkey=misc_feature;gene=dnaK;inference=protein motif:Prosite:PS00329
AM286415.1	EMBL	sequence_feature	701195	701239	.	+	.	ID=id1182;Note=PS01036 Heat shock hsp70 proteins family signature 3.;gbkey=misc_feature;gene=dnaK;inference=protein motif:Prosite:PS01036
AM286415.1	EMBL	gene	702206	703336	.	+	.	ID=gene615;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;gene_synonym=groP;locus_tag=YE0610
AM286415.1	EMBL	CDS	702206	703336	.	+	0	ID=cds579;Parent=gene615;Dbxref=EnsemblGenomes-Gn:YE0610,EnsemblGenomes-Tr:CAL10724,GOA:A1JJD6,InterPro:IPR001305,InterPro:IPR001623,InterPro:IPR002939,InterPro:IPR008971,InterPro:IPR012724,InterPro:IPR018253,NCBI_GP:CAL10724.1;Name=CAL10724.1;gbkey=CDS;gene=dnaJ;product=chaperone protein DnaJ;protein_id=CAL10724.1;transl_table=11
AM286415.1	EMBL	sequence_feature	702218	702415	.	+	.	ID=id1183;Note=Pfam match to entry PF00226 DnaJ%2C DnaJ domain %2Cscore 131.3%2C E-value 1.2e-36;gbkey=misc_feature;gene=dnaJ;inference=protein motif:PFAM:PF00226
AM286415.1	EMBL	sequence_feature	702344	702403	.	+	.	ID=id1184;Note=PS00636 Nt-dnaJ domain signature.;gbkey=misc_feature;gene=dnaJ;inference=protein motif:Prosite:PS00636
AM286415.1	EMBL	sequence_feature	702596	702838	.	+	.	ID=id1185;Note=Pfam match to entry PF00684 DnaJ_CXXCXGXG%2C DnaJ central domain (4 repeats)%2C score 161.7%2C E-value 8.3e-46;gbkey=misc_feature;gene=dnaJ;inference=protein motif:PFAM:PF00684
AM286415.1	EMBL	sequence_feature	702635	702709	.	+	.	ID=id1186;Note=PS00637 CXXCXGXG dnaJ domain signature.;gbkey=misc_feature;gene=dnaJ;inference=protein motif:Prosite:PS00637
AM286415.1	EMBL	sequence_feature	702635	702652	.	+	.	ID=id1187;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=dnaJ;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	702794	702811	.	+	.	ID=id1188;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=dnaJ;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	702875	703240	.	+	.	ID=id1189;Note=Pfam match to entry PF01556 DnaJ_C%2C DnaJ C terminal region%2C score 274.9%2C E-value 6.7e-80;gbkey=misc_feature;gene=dnaJ;inference=protein motif:PFAM:PF01556
AM286415.1	EMBL	gene	703567	704745	.	+	.	ID=gene616;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;gene_synonym=ant,b0019;locus_tag=YE0611
AM286415.1	EMBL	CDS	703567	704745	.	+	0	ID=cds580;Parent=gene616;Dbxref=EnsemblGenomes-Gn:YE0611,EnsemblGenomes-Tr:CAL10725,GOA:A1JJD7,InterPro:IPR004670,InterPro:IPR023171,NCBI_GP:CAL10725.1;Name=CAL10725.1;gbkey=CDS;gene=nhaA;product=sodium-proton antiporter;protein_id=CAL10725.1;transl_table=11
AM286415.1	EMBL	sequence_feature	703603	703671	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	703729	703797	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	703846	703914	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	703942	704001	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	704026	704094	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	704104	704172	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	704209	704277	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	704335	704403	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	704422	704490	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	704548	704616	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	704653	704721	.	+	.	ID=id1190;Note=11 probable transmembrane helices predicted for YE0611 by TMHMM2.0 at aa 13-35%2C 55-77%2C 94-116%2C 126-145%2C154-176%2C 180-202%2C 215-237%2C 257-279%2C 286-308%2C 328-350 and 363-385;gbkey=misc_feature;gene=nhaA;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	704895	705794	.	+	.	ID=gene617;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;gene_synonym=antO,b0020;locus_tag=YE0612
AM286415.1	EMBL	CDS	704895	705794	.	+	0	ID=cds581;Parent=gene617;Dbxref=EnsemblGenomes-Gn:YE0612,EnsemblGenomes-Tr:CAL10726,GOA:A1JJD8,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJD8,NCBI_GP:CAL10726.1;Name=CAL10726.1;gbkey=CDS;gene=nhaR;product=transcriptional activator protein NhaR;protein_id=CAL10726.1;transl_table=11
AM286415.1	EMBL	sequence_feature	704916	705095	.	+	.	ID=id1191;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 84.8%2C E-value 1.1e-22;gbkey=misc_feature;gene=nhaR;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	704958	705050	.	+	.	ID=id1192;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=nhaR;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	705162	705785	.	+	.	ID=id1193;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 24.2%2C E-value 2.3e-05;gbkey=misc_feature;gene=nhaR;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	705938	706201	.	-	.	ID=gene618;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;gene_synonym=b0023;locus_tag=YE0613
AM286415.1	EMBL	CDS	705938	706201	.	-	0	ID=cds582;Parent=gene618;Dbxref=EnsemblGenomes-Gn:YE0613,EnsemblGenomes-Tr:CAL10727,GOA:A1JJD9,InterPro:IPR002583,NCBI_GP:CAL10727.1;Name=CAL10727.1;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=CAL10727.1;transl_table=11
AM286415.1	EMBL	sequence_feature	705947	706198	.	-	.	ID=id1194;Note=Pfam match to entry PF01649 Ribosomal_S20p%2CRibosomal protein S20%2C score 162.6%2C E-value 4.4e-46;gbkey=misc_feature;gene=rpsT;inference=protein motif:PFAM:PF01649
AM286415.1	EMBL	gene	706615	707553	.	+	.	ID=gene619;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;gene_synonym=b0025;locus_tag=YE0615
AM286415.1	EMBL	CDS	706615	707553	.	+	0	ID=cds583;Parent=gene619;Dbxref=EnsemblGenomes-Gn:YE0615,EnsemblGenomes-Tr:CAL10728,GOA:A1JJE0,InterPro:IPR002606,InterPro:IPR004821,InterPro:IPR014729,InterPro:IPR015864,InterPro:IPR015865,InterPro:IPR023465,InterPro:IPR023468,UniProtKB/TrEMBL:A1JJE0,NCBI_GP:CAL10728.1;Name=CAL10728.1;gbkey=CDS;gene=ribF;product=riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase);protein_id=CAL10728.1;transl_table=11
AM286415.1	EMBL	sequence_feature	707161	707535	.	+	.	ID=id1195;Note=Pfam match to entry PF01687 FAD_Synth%2C Riboflavin kinase / FAD synthetase%2C score 221.2%2C E-value 9.9e-64;gbkey=misc_feature;gene=ribF;inference=protein motif:PFAM:PF01687
AM286415.1	EMBL	gene	707585	710401	.	+	.	ID=gene620;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;gene_synonym=b0026,ilvS;locus_tag=YE0616
AM286415.1	EMBL	CDS	707585	710401	.	+	0	ID=cds584;Parent=gene620;Dbxref=EnsemblGenomes-Gn:YE0616,EnsemblGenomes-Tr:CAL10729,GOA:A1JJE1,InterPro:IPR001412,InterPro:IPR002300,InterPro:IPR002301,InterPro:IPR009008,InterPro:IPR009080,InterPro:IPR010663,InterPro:IPR013155,InterPro:IPR014729,InterPro:IPR023585,NCBI_GP:CAL10729.1;Name=CAL10729.1;gbkey=CDS;gene=ileS;product=isoleucyl-tRNA synthetase;protein_id=CAL10729.1;transl_table=11
AM286415.1	EMBL	sequence_feature	707663	709507	.	+	.	ID=id1196;Note=Pfam match to entry PF00133 tRNA-synt_1%2C tRNA synthetases class I (I%2C L%2C M and V)%2C score 1087.6%2CE-value 0;gbkey=misc_feature;gene=ileS;inference=protein motif:PFAM:PF00133
AM286415.1	EMBL	sequence_feature	707756	707791	.	+	.	ID=id1197;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=ileS;inference=protein motif:Prosite:PS00178
AM286415.1	EMBL	gene	710401	710910	.	+	.	ID=gene621;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;gene_synonym=b0027;locus_tag=YE0617
AM286415.1	EMBL	CDS	710401	710910	.	+	0	ID=cds585;Parent=gene621;Dbxref=EnsemblGenomes-Gn:YE0617,EnsemblGenomes-Tr:CAL10730,GOA:A1JJE2,InterPro:IPR001872,NCBI_GP:CAL10730.1;Name=CAL10730.1;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=CAL10730.1;transl_table=11
AM286415.1	EMBL	sequence_feature	710428	710892	.	+	.	ID=id1198;Note=Pfam match to entry PF01252 Peptidase_A8%2C Signal peptidase (SPase) II%2C score 263.1%2C E-value 2.5e-76;gbkey=misc_feature;gene=lspA;inference=protein motif:PFAM:PF01252
AM286415.1	EMBL	sequence_feature	710437	710505	.	+	.	ID=id1199;Note=4 probable transmembrane helices predicted for YE0617 by TMHMM2.0 at aa 13-35%2C 66-88%2C 100-122 and 137-159;gbkey=misc_feature;gene=lspA;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	710596	710664	.	+	.	ID=id1199;Note=4 probable transmembrane helices predicted for YE0617 by TMHMM2.0 at aa 13-35%2C 66-88%2C 100-122 and 137-159;gbkey=misc_feature;gene=lspA;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	710698	710766	.	+	.	ID=id1199;Note=4 probable transmembrane helices predicted for YE0617 by TMHMM2.0 at aa 13-35%2C 66-88%2C 100-122 and 137-159;gbkey=misc_feature;gene=lspA;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	710809	710877	.	+	.	ID=id1199;Note=4 probable transmembrane helices predicted for YE0617 by TMHMM2.0 at aa 13-35%2C 66-88%2C 100-122 and 137-159;gbkey=misc_feature;gene=lspA;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	710716	710748	.	+	.	ID=id1200;Note=PS00855 Signal peptidases II signature.;gbkey=misc_feature;gene=lspA;inference=protein motif:Prosite:PS00855
AM286415.1	EMBL	gene	710960	711397	.	+	.	ID=gene622;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;gene_synonym=b0028,slpA;locus_tag=YE0618
AM286415.1	EMBL	CDS	710960	711397	.	+	0	ID=cds586;Parent=gene622;Dbxref=EnsemblGenomes-Gn:YE0618,EnsemblGenomes-Tr:CAL10731,GOA:A1JJE3,InterPro:IPR001179,UniProtKB/TrEMBL:A1JJE3,NCBI_GP:CAL10731.1;Name=CAL10731.1;gbkey=CDS;gene=fkpB;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=CAL10731.1;transl_table=11
AM286415.1	EMBL	sequence_feature	710963	711349	.	+	.	ID=id1201;Note=Pfam match to entry PF00254 FKBP%2C FKBP-type peptidyl-prolyl cis-trans isomerase%2C score 28.1%2C E-value 1.2e-08;gbkey=misc_feature;gene=fkpB;inference=protein motif:PFAM:PF00254
AM286415.1	EMBL	sequence_feature	710963	711010	.	+	.	ID=id1202;Note=PS00453 FKBP-type peptidyl-prolyl cis-trans isomerase signature 1.;gbkey=misc_feature;gene=fkpB;inference=protein motif:Prosite:PS00453
AM286415.1	EMBL	sequence_feature	711056	711142	.	+	.	ID=id1203;Note=PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2.;gbkey=misc_feature;gene=fkpB;inference=protein motif:Prosite:PS00454
AM286415.1	EMBL	gene	711378	712331	.	+	.	ID=gene623;Name=lytB;gbkey=Gene;gene=lytB;gene_biotype=protein_coding;gene_synonym=b0029;locus_tag=YE0619
AM286415.1	EMBL	CDS	711378	712331	.	+	0	ID=cds587;Parent=gene623;Dbxref=EnsemblGenomes-Gn:YE0619,EnsemblGenomes-Tr:CAL10732,GOA:A1JJE4,InterPro:IPR003451,NCBI_GP:CAL10732.1;Name=CAL10732.1;gbkey=CDS;gene=lytB;product=LytB protein;protein_id=CAL10732.1;transl_table=11
AM286415.1	EMBL	sequence_feature	711384	712235	.	+	.	ID=id1204;Note=Pfam match to entry PF02401 LYTB%2C LytB protein %2Cscore 601.1%2C E-value 4.2e-178;gbkey=misc_feature;gene=lytB;inference=protein motif:PFAM:PF02401
AM286415.1	EMBL	gene	712666	713487	.	+	.	ID=gene624;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;gene_synonym=b0031;locus_tag=YE0620
AM286415.1	EMBL	CDS	712666	713487	.	+	0	ID=cds588;Parent=gene624;Dbxref=EnsemblGenomes-Gn:YE0620,EnsemblGenomes-Tr:CAL10733,GOA:A1JJE5,InterPro:IPR000846,InterPro:IPR011770,InterPro:IPR016040,InterPro:IPR022663,InterPro:IPR022664,InterPro:IPR023940,NCBI_GP:CAL10733.1;Name=CAL10733.1;gbkey=CDS;gene=dapB;product=dihydrodipicolinate reductase;protein_id=CAL10733.1;transl_table=11
AM286415.1	EMBL	sequence_feature	712681	713253	.	+	.	ID=id1205;Note=Pfam match to entry PF01113 DapB%2CDihydrodipicolinate reductase%2C score 356.5%2C E-value 1.9e-104;gbkey=misc_feature;gene=dapB;inference=protein motif:PFAM:PF01113
AM286415.1	EMBL	sequence_feature	713125	713178	.	+	.	ID=id1206;Note=PS01298 Dihydrodipicolinate reductase signature.;gbkey=misc_feature;gene=dapB;inference=protein motif:Prosite:PS01298
AM286415.1	EMBL	gene	713960	715123	.	+	.	ID=gene625;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;gene_synonym=b0032,pyrA;locus_tag=YE0621
AM286415.1	EMBL	CDS	713960	715123	.	+	0	ID=cds589;Parent=gene625;Dbxref=EnsemblGenomes-Gn:YE0621,EnsemblGenomes-Tr:CAL10734,GOA:A1JJE6,InterPro:IPR002474,InterPro:IPR006274,InterPro:IPR017926,InterPro:IPR029062,UniProtKB/TrEMBL:A1JJE6,NCBI_GP:CAL10734.1;Name=CAL10734.1;gbkey=CDS;gene=carA;product=carbamoyl-phosphate synthase small chain;protein_id=CAL10734.1;transl_table=11
AM286415.1	EMBL	sequence_feature	713966	714412	.	+	.	ID=id1207;Note=Pfam match to entry PF00988 CPSase_sm_chain%2CCarbamoyl-phosphate synthase small chain%2C CPSase domain %2Cscore 309.2%2C E-value 3.2e-90;gbkey=misc_feature;gene=carA;inference=protein motif:PFAM:PF00988
AM286415.1	EMBL	sequence_feature	714542	715078	.	+	.	ID=id1208;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 251.9%2C E-value 5.6e-73;gbkey=misc_feature;gene=carA;inference=protein motif:PFAM:PF00117
AM286415.1	EMBL	sequence_feature	714749	714784	.	+	.	ID=id1209;Note=PS00442 Glutamine amidotransferases class-I active site.;gbkey=misc_feature;gene=carA;inference=protein motif:Prosite:PS00442
AM286415.1	EMBL	gene	715140	718373	.	+	.	ID=gene626;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;gene_synonym=b0033,pyrA;locus_tag=YE0622
AM286415.1	EMBL	CDS	715140	718373	.	+	0	ID=cds590;Parent=gene626;Dbxref=EnsemblGenomes-Gn:YE0622,EnsemblGenomes-Tr:CAL10735,GOA:A1JJE7,InterPro:IPR005479,InterPro:IPR005480,InterPro:IPR005481,InterPro:IPR005483,InterPro:IPR006275,InterPro:IPR011607,InterPro:IPR011761,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR016185,UniProtKB/TrEMBL:A1JJE7,NCBI_GP:CAL10735.1;Name=CAL10735.1;gbkey=CDS;gene=carB;product=carbamoyl-phosphate synthase large chain;protein_id=CAL10735.1;transl_table=11
AM286415.1	EMBL	sequence_feature	715155	715517	.	+	.	ID=id1210;Note=Pfam match to entry PF00289 CPSase_L_chain%2CCarbamoyl-phosphate synthase L chain%2C N-terminal domain %2Cscore 222.3%2C E-value 4.7e-64;gbkey=misc_feature;gene=carB;inference=protein motif:PFAM:PF00289
AM286415.1	EMBL	sequence_feature	715179	715211	.	+	.	ID=id1211;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=carB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	715521	716231	.	+	.	ID=id1212;Note=Pfam match to entry PF02786 CPSase_L_D2%2CCarbamoyl-phosphate synthase L chain%2C ATP binding domain %2Cscore 458.5%2C E-value 3.6e-135;gbkey=misc_feature;gene=carB;inference=protein motif:PFAM:PF02786
AM286415.1	EMBL	sequence_feature	715629	715673	.	+	.	ID=id1213;Note=PS00866 Carbamoyl-phosphate synthase subdomain signature 1.;gbkey=misc_feature;gene=carB;inference=protein motif:Prosite:PS00866
AM286415.1	EMBL	sequence_feature	716028	716051	.	+	.	ID=id1214;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2.;gbkey=misc_feature;gene=carB;inference=protein motif:Prosite:PS00867
AM286415.1	EMBL	sequence_feature	716409	716780	.	+	.	ID=id1215;Note=Pfam match to entry PF02787 CPSase_L_D3%2CCarbamoyl-phosphate synthetase large chain%2Coligomerisation domain%2C score 231.9%2C E-value 6e-67;gbkey=misc_feature;gene=carB;inference=protein motif:PFAM:PF02787
AM286415.1	EMBL	sequence_feature	716811	717155	.	+	.	ID=id1216;Note=Pfam match to entry PF00289 CPSase_L_chain%2CCarbamoyl-phosphate synthase L chain%2C N-terminal domain %2Cscore 91.1%2C E-value 1.4e-24;gbkey=misc_feature;gene=carB;inference=protein motif:PFAM:PF00289
AM286415.1	EMBL	sequence_feature	717159	717791	.	+	.	ID=id1217;Note=Pfam match to entry PF02786 CPSase_L_D2%2CCarbamoyl-phosphate synthase L chain%2C ATP binding domain %2Cscore 90.7%2C E-value 1.9e-24;gbkey=misc_feature;gene=carB;inference=protein motif:PFAM:PF02786
AM286415.1	EMBL	sequence_feature	717267	717311	.	+	.	ID=id1218;Note=PS00866 Carbamoyl-phosphate synthase subdomain signature 1.;gbkey=misc_feature;gene=carB;inference=protein motif:Prosite:PS00866
AM286415.1	EMBL	sequence_feature	717654	717677	.	+	.	ID=id1219;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2.;gbkey=misc_feature;gene=carB;inference=protein motif:Prosite:PS00867
AM286415.1	EMBL	sequence_feature	717972	718265	.	+	.	ID=id1220;Note=Pfam match to entry PF02142 MGS%2C MGS-like domain %2Cscore 121.7%2C E-value 8.8e-34;gbkey=misc_feature;gene=carB;inference=protein motif:PFAM:PF02142
AM286415.1	EMBL	gene	718571	719185	.	-	.	ID=gene627;Name=YE0623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0623
AM286415.1	EMBL	CDS	718571	719185	.	-	0	ID=cds591;Parent=gene627;Dbxref=EnsemblGenomes-Gn:YE0623,EnsemblGenomes-Tr:CAL10736,GOA:A1JJE8,InterPro:IPR001123,UniProtKB/TrEMBL:A1JJE8,NCBI_GP:CAL10736.1;Name=CAL10736.1;gbkey=CDS;product=putative LysE type translocator;protein_id=CAL10736.1;transl_table=11
AM286415.1	EMBL	sequence_feature	718658	718984	.	-	.	ID=id1221;Note=Pfam match to entry PF01810 LysE%2C LysE type translocator%2C score 62.0%2C E-value 8.5e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF01810
AM286415.1	EMBL	sequence_feature	719105	719173	.	-	.	ID=id1222;Note=5 probable transmembrane helices predicted for YE0623 by TMHMM2.0 at aa 5-27%2C 43-65%2C 69-91%2C 112-134 and 149-171;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	718991	719059	.	-	.	ID=id1222;Note=5 probable transmembrane helices predicted for YE0623 by TMHMM2.0 at aa 5-27%2C 43-65%2C 69-91%2C 112-134 and 149-171;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	718913	718981	.	-	.	ID=id1222;Note=5 probable transmembrane helices predicted for YE0623 by TMHMM2.0 at aa 5-27%2C 43-65%2C 69-91%2C 112-134 and 149-171;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	718784	718852	.	-	.	ID=id1222;Note=5 probable transmembrane helices predicted for YE0623 by TMHMM2.0 at aa 5-27%2C 43-65%2C 69-91%2C 112-134 and 149-171;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	718673	718741	.	-	.	ID=id1222;Note=5 probable transmembrane helices predicted for YE0623 by TMHMM2.0 at aa 5-27%2C 43-65%2C 69-91%2C 112-134 and 149-171;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	719338	720135	.	+	.	ID=gene628;Name=yjjP;gbkey=Gene;gene=yjjP;gene_biotype=protein_coding;gene_synonym=b4364;locus_tag=YE0624
AM286415.1	EMBL	CDS	719338	720135	.	+	0	ID=cds592;Parent=gene628;Dbxref=EnsemblGenomes-Gn:YE0624,EnsemblGenomes-Tr:CAL10737,InterPro:IPR010619,UniProtKB/TrEMBL:A1JJE9,NCBI_GP:CAL10737.1;Name=CAL10737.1;gbkey=CDS;gene=yjjP;product=putative membrane protein;protein_id=CAL10737.1;transl_table=11
AM286415.1	EMBL	sequence_feature	719716	719748	.	+	.	ID=id1223;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yjjP;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	719770	719829	.	+	.	ID=id1224;Note=4 probable transmembrane helices predicted for YE0624 by TMHMM2.0 at aa 145-164%2C 176-198%2C 202-224 and 236-258;gbkey=misc_feature;gene=yjjP;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	719863	719931	.	+	.	ID=id1224;Note=4 probable transmembrane helices predicted for YE0624 by TMHMM2.0 at aa 145-164%2C 176-198%2C 202-224 and 236-258;gbkey=misc_feature;gene=yjjP;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	719941	720009	.	+	.	ID=id1224;Note=4 probable transmembrane helices predicted for YE0624 by TMHMM2.0 at aa 145-164%2C 176-198%2C 202-224 and 236-258;gbkey=misc_feature;gene=yjjP;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	720043	720111	.	+	.	ID=id1224;Note=4 probable transmembrane helices predicted for YE0624 by TMHMM2.0 at aa 145-164%2C 176-198%2C 202-224 and 236-258;gbkey=misc_feature;gene=yjjP;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	720135	720599	.	+	.	ID=gene629;Name=YE0625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0625
AM286415.1	EMBL	CDS	720135	720599	.	+	0	ID=cds593;Parent=gene629;Dbxref=EnsemblGenomes-Gn:YE0625,EnsemblGenomes-Tr:CAL10738,GOA:A1JJF0,InterPro:IPR020914,InterPro:IPR024528,NCBI_GP:CAL10738.1;Name=CAL10738.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10738.1;transl_table=11
AM286415.1	EMBL	sequence_feature	720147	720215	.	+	.	ID=id1225;Note=5 probable transmembrane helices predicted for YE0625 by TMHMM2.0 at aa 5-27%2C 34-53%2C 58-80%2C 87-109 and 129-148;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	720234	720293	.	+	.	ID=id1225;Note=5 probable transmembrane helices predicted for YE0625 by TMHMM2.0 at aa 5-27%2C 34-53%2C 58-80%2C 87-109 and 129-148;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	720306	720374	.	+	.	ID=id1225;Note=5 probable transmembrane helices predicted for YE0625 by TMHMM2.0 at aa 5-27%2C 34-53%2C 58-80%2C 87-109 and 129-148;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	720393	720461	.	+	.	ID=id1225;Note=5 probable transmembrane helices predicted for YE0625 by TMHMM2.0 at aa 5-27%2C 34-53%2C 58-80%2C 87-109 and 129-148;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	720519	720578	.	+	.	ID=id1225;Note=5 probable transmembrane helices predicted for YE0625 by TMHMM2.0 at aa 5-27%2C 34-53%2C 58-80%2C 87-109 and 129-148;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	720773	721234	.	+	.	ID=gene630;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;gene_synonym=tmrA;locus_tag=YE0626
AM286415.1	EMBL	CDS	720773	721234	.	+	0	ID=cds594;Parent=gene630;Dbxref=EnsemblGenomes-Gn:YE0626,EnsemblGenomes-Tr:CAL10739,GOA:A1JJF1,InterPro:IPR001796,InterPro:IPR012259,InterPro:IPR017925,InterPro:IPR024072,UniProtKB/TrEMBL:A1JJF1,NCBI_GP:CAL10739.1;Name=CAL10739.1;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=CAL10739.1;transl_table=11
AM286415.1	EMBL	sequence_feature	720773	721228	.	+	.	ID=id1226;Note=Pfam match to entry PF00186 DiHfolate_red%2CDihydrofolate reductase%2C score 189.7%2C E-value 3.1e-54;gbkey=misc_feature;gene=folA;inference=protein motif:PFAM:PF00186
AM286415.1	EMBL	sequence_feature	720791	720859	.	+	.	ID=id1227;Note=PS00075 Dihydrofolate reductase signature.;gbkey=misc_feature;gene=folA;inference=protein motif:Prosite:PS00075
AM286415.1	EMBL	gene	721382	722260	.	-	.	ID=gene631;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;gene_synonym=b0049;locus_tag=YE0628
AM286415.1	EMBL	CDS	721382	722260	.	-	0	ID=cds595;Parent=gene631;Dbxref=EnsemblGenomes-Gn:YE0628,EnsemblGenomes-Tr:CAL10740,GOA:A1JJF2,InterPro:IPR004617,InterPro:IPR004843,InterPro:IPR029052,NCBI_GP:CAL10740.1;Name=CAL10740.1;gbkey=CDS;gene=apaH;product=bis(5'nucleosyl)-tetraphosphatase;protein_id=CAL10740.1;transl_table=11
AM286415.1	EMBL	sequence_feature	721568	722260	.	-	.	ID=id1228;Note=Pfam match to entry PF00149 Metallophos%2CCalcineurin-like phosphoesterase%2C score 66.3%2C E-value 4.3e-17;gbkey=misc_feature;gene=apaH;inference=protein motif:PFAM:PF00149
AM286415.1	EMBL	gene	722275	722652	.	-	.	ID=gene632;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;gene_synonym=corD;locus_tag=YE0629
AM286415.1	EMBL	CDS	722275	722652	.	-	0	ID=cds596;Parent=gene632;Dbxref=EnsemblGenomes-Gn:YE0629,EnsemblGenomes-Tr:CAL10741,InterPro:IPR007474,InterPro:IPR023065,NCBI_GP:CAL10741.1;Name=CAL10741.1;gbkey=CDS;gene=apaG;product=ApaG protein homologue;protein_id=CAL10741.1;transl_table=11
AM286415.1	EMBL	gene	722666	723484	.	-	.	ID=gene633;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;gene_synonym=b0051,rsmA;locus_tag=YE0630
AM286415.1	EMBL	CDS	722666	723484	.	-	0	ID=cds597;Parent=gene633;Dbxref=EnsemblGenomes-Gn:YE0630,EnsemblGenomes-Tr:CAL10742,GOA:A1JJF4,InterPro:IPR001737,InterPro:IPR011530,InterPro:IPR020596,InterPro:IPR020598,InterPro:IPR023165,InterPro:IPR029063,NCBI_GP:CAL10742.1;Name=CAL10742.1;gbkey=CDS;gene=ksgA;product=dimethyladenosine transferase;protein_id=CAL10742.1;transl_table=11
AM286415.1	EMBL	sequence_feature	722699	723436	.	-	.	ID=id1229;Note=Pfam match to entry PF00398 RrnaAD%2C Ribosomal RNA adenine dimethylase%2C score 343.6%2C E-value 1.4e-100;gbkey=misc_feature;gene=ksgA;inference=protein motif:PFAM:PF00398
AM286415.1	EMBL	sequence_feature	723281	723364	.	-	.	ID=id1230;Note=PS01131 Ribosomal RNA adenine dimethylases signature.;gbkey=misc_feature;gene=ksgA;inference=protein motif:Prosite:PS01131
AM286415.1	EMBL	gene	723477	724472	.	-	.	ID=gene634;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=YE0631
AM286415.1	EMBL	CDS	723477	724472	.	-	0	ID=cds598;Parent=gene634;Dbxref=EnsemblGenomes-Gn:YE0631,EnsemblGenomes-Tr:CAL10743,GOA:A1JJF5,InterPro:IPR005255,InterPro:IPR024084,NCBI_GP:CAL10743.1;Name=CAL10743.1;gbkey=CDS;gene=pdxA;product=pyridoxal phosphate biosynthetic protein;protein_id=CAL10743.1;transl_table=11
AM286415.1	EMBL	gene	724456	725760	.	-	.	ID=gene635;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;gene_synonym=b0053;locus_tag=YE0632
AM286415.1	EMBL	CDS	724456	725760	.	-	0	ID=cds599;Parent=gene635;Dbxref=EnsemblGenomes-Gn:YE0632,EnsemblGenomes-Tr:CAL10744,GOA:A1JJF6,InterPro:IPR000297,InterPro:IPR015391,InterPro:IPR023034,InterPro:IPR027304,UniProtKB/TrEMBL:A1JJF6,NCBI_GP:CAL10744.1;Name=CAL10744.1;gbkey=CDS;gene=surA;product=survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase);protein_id=CAL10744.1;transl_table=11
AM286415.1	EMBL	sequence_feature	724615	724917	.	-	.	ID=id1231;Note=Pfam match to entry PF00639 Rotamase%2C PPIC-type PPIASE domain%2C score 171.7%2C E-value 7.9e-49;gbkey=misc_feature;gene=surA;inference=protein motif:PFAM:PF00639
AM286415.1	EMBL	sequence_feature	724945	725250	.	-	.	ID=id1232;Note=Pfam match to entry PF00639 Rotamase%2C PPIC-type PPIASE domain%2C score 130.2%2C E-value 2.5e-36;gbkey=misc_feature;gene=surA;inference=protein motif:PFAM:PF00639
AM286415.1	EMBL	sequence_feature	725065	725127	.	-	.	ID=id1233;Note=PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature.;gbkey=misc_feature;gene=surA;inference=protein motif:Prosite:PS01096
AM286415.1	EMBL	gene	725828	728194	.	-	.	ID=gene636;Name=imp;gbkey=Gene;gene=imp;gene_biotype=protein_coding;gene_synonym=b0054,ostA;locus_tag=YE0633
AM286415.1	EMBL	CDS	725828	728194	.	-	0	ID=cds600;Parent=gene636;Dbxref=EnsemblGenomes-Gn:YE0633,EnsemblGenomes-Tr:CAL10745,GOA:A1JJF7,InterPro:IPR005653,InterPro:IPR007543,InterPro:IPR020889,NCBI_GP:CAL10745.1;Name=CAL10745.1;gbkey=CDS;gene=imp;product=organic solvent tolerance protein precursor;protein_id=CAL10745.1;transl_table=11
AM286415.1	EMBL	sequence_feature	727913	728047	.	-	.	ID=id1234;Note=Pfam match to entry PF03968 OstA%2C OstA-like protein%2C score 21.6%2C E-value 5.4e-06;gbkey=misc_feature;gene=imp;inference=protein motif:PFAM:PF03968
AM286415.1	EMBL	gene	728454	729206	.	+	.	ID=gene637;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;gene_synonym=b0055;locus_tag=YE0634
AM286415.1	EMBL	CDS	728454	729206	.	+	0	ID=cds601;Parent=gene637;Dbxref=EnsemblGenomes-Gn:YE0634,EnsemblGenomes-Tr:CAL10746,InterPro:IPR001623,InterPro:IPR007791,InterPro:IPR029024,UniProtKB/TrEMBL:A1JJF8,NCBI_GP:CAL10746.1;Name=CAL10746.1;gbkey=CDS;gene=djlA;product=DnaJ-like protein;protein_id=CAL10746.1;transl_table=11
AM286415.1	EMBL	sequence_feature	729003	729203	.	+	.	ID=id1235;Note=Pfam match to entry PF00226 DnaJ%2C DnaJ domain %2Cscore 50.8%2C E-value 2e-12;gbkey=misc_feature;gene=djlA;inference=protein motif:PFAM:PF00226
AM286415.1	EMBL	gene	729292	729882	.	-	.	ID=gene638;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=YE0635
AM286415.1	EMBL	CDS	729292	729882	.	-	0	ID=cds602;Parent=gene638;Dbxref=EnsemblGenomes-Gn:YE0635,EnsemblGenomes-Tr:CAL10747,GOA:A1JJF9,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR020103,UniProtKB/TrEMBL:A1JJF9,NCBI_GP:CAL10747.1;Name=CAL10747.1;gbkey=CDS;gene=rluA;product=ribosomal large subunit pseudouridine synthase A;protein_id=CAL10747.1;transl_table=11
AM286415.1	EMBL	sequence_feature	729442	729882	.	-	.	ID=id1236;Note=Pfam match to entry PF00849 PseudoU_synth_2%2C RNA pseudouridylate synthase%2C score 177.4%2C E-value 1.5e-50;gbkey=misc_feature;gene=rluA;inference=protein motif:PFAM:PF00849
AM286415.1	EMBL	sequence_feature	729523	729588	.	-	.	ID=id1237;Note=Predicted helix-turn-helix motif with score 991.000%2C SD 2.56 at aa 99-120%2C sequence RPKQKVCYETGKSSQTQYQVLS;gbkey=misc_feature;gene=rluA
AM286415.1	EMBL	sequence_feature	729730	729774	.	-	.	ID=id1238;Note=PS01129 Rlu family of pseudouridine synthase signature.;gbkey=misc_feature;gene=rluA;inference=protein motif:Prosite:PS01129
AM286415.1	EMBL	gene	730023	732929	.	-	.	ID=gene639;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;gene_synonym=hepA;locus_tag=YE0636
AM286415.1	EMBL	CDS	730023	732929	.	-	0	ID=cds603;Parent=gene639;Dbxref=EnsemblGenomes-Gn:YE0636,EnsemblGenomes-Tr:CAL10748,GOA:A1JJG0,InterPro:IPR000330,InterPro:IPR001650,InterPro:IPR014001,InterPro:IPR022737,InterPro:IPR023949,InterPro:IPR027417,NCBI_GP:CAL10748.1;Name=CAL10748.1;gbkey=CDS;gene=rapA;product=RNA polymerase associated helicase;protein_id=CAL10748.1;transl_table=11
AM286415.1	EMBL	sequence_feature	731127	731348	.	-	.	ID=id1239;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 60.8%2C E-value 1.9e-15;gbkey=misc_feature;gene=rapA;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	731568	732461	.	-	.	ID=id1240;Note=Pfam match to entry PF00176 SNF2_N%2C SNF2 family N-terminal domain%2C score 222.8%2C E-value 3.4e-64;gbkey=misc_feature;gene=rapA;inference=protein motif:PFAM:PF00176
AM286415.1	EMBL	gene	733066	735438	.	-	.	ID=gene640;Name=polB;gbkey=Gene;gene=polB;gene_biotype=protein_coding;gene_synonym=dinA;locus_tag=YE0637
AM286415.1	EMBL	CDS	733066	735438	.	-	0	ID=cds604;Parent=gene640;Dbxref=EnsemblGenomes-Gn:YE0637,EnsemblGenomes-Tr:CAL10749,GOA:A1JJG1,InterPro:IPR006133,InterPro:IPR006134,InterPro:IPR006172,InterPro:IPR012337,InterPro:IPR017964,InterPro:IPR023211,UniProtKB/TrEMBL:A1JJG1,NCBI_GP:CAL10749.1;Name=CAL10749.1;gbkey=CDS;gene=polB;product=DNA polymerase II;protein_id=CAL10749.1;transl_table=11
AM286415.1	EMBL	sequence_feature	733069	734319	.	-	.	ID=id1241;Note=Pfam match to entry PF00136 DNA_pol_B%2C DNA polymerase family B%2C score 254.9%2C E-value 7.1e-74;gbkey=misc_feature;gene=polB;inference=protein motif:PFAM:PF00136
AM286415.1	EMBL	sequence_feature	733768	733794	.	-	.	ID=id1242;Note=PS00116 DNA polymerase family B signature.;gbkey=misc_feature;gene=polB;inference=protein motif:Prosite:PS00116
AM286415.1	EMBL	sequence_feature	733897	733929	.	-	.	ID=id1243;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=polB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	734602	735411	.	-	.	ID=id1244;Note=Pfam match to entry PF03104 DNA_pol_B_exo%2C DNA polymerase family B%2C exonuclease domain%2C score 44.1%2CE-value 2.1e-10;gbkey=misc_feature;gene=polB;inference=protein motif:PFAM:PF03104
AM286415.1	EMBL	gene	735879	736649	.	+	.	ID=gene641;Name=YE0639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0639
AM286415.1	EMBL	CDS	735879	736649	.	+	0	ID=cds605;Parent=gene641;Dbxref=EnsemblGenomes-Gn:YE0639,EnsemblGenomes-Tr:CAL10750,InterPro:IPR015414,UniProtKB/TrEMBL:A1JJG2,NCBI_GP:CAL10750.1;Name=CAL10750.1;gbkey=CDS;product=putative DedA-family membrane protein;protein_id=CAL10750.1;transl_table=11
AM286415.1	EMBL	sequence_feature	735915	735983	.	+	.	ID=id1245;Note=5 probable transmembrane helices predicted for YE0639 by TMHMM2.0 at aa 13-35%2C 55-77%2C 140-162%2C 177-199 and 220-242;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	736041	736109	.	+	.	ID=id1245;Note=5 probable transmembrane helices predicted for YE0639 by TMHMM2.0 at aa 13-35%2C 55-77%2C 140-162%2C 177-199 and 220-242;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	736296	736364	.	+	.	ID=id1245;Note=5 probable transmembrane helices predicted for YE0639 by TMHMM2.0 at aa 13-35%2C 55-77%2C 140-162%2C 177-199 and 220-242;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	736407	736475	.	+	.	ID=id1245;Note=5 probable transmembrane helices predicted for YE0639 by TMHMM2.0 at aa 13-35%2C 55-77%2C 140-162%2C 177-199 and 220-242;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	736536	736604	.	+	.	ID=id1245;Note=5 probable transmembrane helices predicted for YE0639 by TMHMM2.0 at aa 13-35%2C 55-77%2C 140-162%2C 177-199 and 220-242;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	735930	736412	.	+	.	ID=id1246;Note=Pfam match to entry PF00597 DedA%2C DedA family %2Cscore 166.7%2C E-value 2.5e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF00597
AM286415.1	EMBL	sequence_feature	736047	736079	.	+	.	ID=id1247;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	736422	736454	.	+	.	ID=id1248;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	736636	737292	.	-	.	ID=gene642;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=YE0640
AM286415.1	EMBL	CDS	736636	737292	.	-	0	ID=cds606;Parent=gene642;Dbxref=EnsemblGenomes-Gn:YE0640,EnsemblGenomes-Tr:CAL10751,GOA:A1JJG3,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005968,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJG3,NCBI_GP:CAL10751.1;Name=CAL10751.1;gbkey=CDS;gene=thiQ;product=thiamine transport ATP-binding protein;protein_id=CAL10751.1;transl_table=11
AM286415.1	EMBL	sequence_feature	736720	737265	.	-	.	ID=id1249;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 219.5%2C E-value 3.2e-63;gbkey=misc_feature;gene=thiQ;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	736906	736950	.	-	.	ID=id1250;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=thiQ;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	737188	737256	.	-	.	ID=id1251;Note=1 probable transmembrane helix predicted for YE0640 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;gene=thiQ;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	737221	737244	.	-	.	ID=id1252;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=thiQ;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	737324	738871	.	-	.	ID=gene643;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=YE0641
AM286415.1	EMBL	CDS	737324	738871	.	-	0	ID=cds607;Parent=gene643;Dbxref=EnsemblGenomes-Gn:YE0641,EnsemblGenomes-Tr:CAL10752,GOA:A1JJG4,InterPro:IPR000515,InterPro:IPR005947,UniProtKB/TrEMBL:A1JJG4,NCBI_GP:CAL10752.1;Name=CAL10752.1;gbkey=CDS;gene=thiP;product=thiamine transport system permease protein;protein_id=CAL10752.1;transl_table=11
AM286415.1	EMBL	sequence_feature	738815	738868	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	738698	738757	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	738593	738661	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	738455	738523	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	738278	738346	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	738152	738220	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	737999	738067	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	737873	737941	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	737747	737815	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	737660	737719	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	737480	737548	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	737357	737410	.	-	.	ID=id1253;Note=12 probable transmembrane helices predicted for YE0641 by TMHMM2.0 at aa 2-19%2C 39-58%2C 71-93%2C 117-139%2C176-198%2C 218-240%2C 269-291%2C 311-333%2C 353-375%2C 385-404%2C442-464 and 488-505;gbkey=misc_feature;gene=thiP;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	738227	738451	.	-	.	ID=id1254;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 24.4%2C E-value 0.00018;gbkey=misc_feature;gene=thiP;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	738368	738433	.	-	.	ID=id1255;Note=Predicted helix-turn-helix motif with score 1426.000%2C SD 4.04 at aa 147-168%2C sequence VEQRQLAAQLGMNGWQHFRWVE;gbkey=misc_feature;gene=thiP
AM286415.1	EMBL	gene	738907	739869	.	-	.	ID=gene644;Name=tbpA;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=YE0642
AM286415.1	EMBL	CDS	738907	739869	.	-	0	ID=cds608;Parent=gene644;Dbxref=EnsemblGenomes-Gn:YE0642,EnsemblGenomes-Tr:CAL10753,GOA:A1JJG5,InterPro:IPR005948,InterPro:IPR005967,UniProtKB/TrEMBL:A1JJG5,NCBI_GP:CAL10753.1;Name=CAL10753.1;gbkey=CDS;gene=tbpA;product=thiamine-binding periplasmic protein;protein_id=CAL10753.1;transl_table=11
AM286415.1	EMBL	sequence_feature	738910	739794	.	-	.	ID=id1256;Note=Pfam match to entry PF01547 SBP_bac_1%2C Bacterial extracellular solute-binding protein%2C score 44.4%2C E-value 1.6e-10;gbkey=misc_feature;gene=tbpA;inference=protein motif:PFAM:PF01547
AM286415.1	EMBL	transcript	739972	740050	.	-	.	ID=rna44;Note=TPP riboswitch (THI element) (RF00059) as predicted by Rfam%2C score 32.08%2C positions 1 to 105;gbkey=misc_RNA
AM286415.1	EMBL	exon	739972	740050	.	-	.	ID=id1257;Parent=rna44;Note=TPP riboswitch (THI element) (RF00059) as predicted by Rfam%2C score 32.08%2C positions 1 to 105;gbkey=misc_RNA
AM286415.1	EMBL	gene	740349	741152	.	+	.	ID=gene645;Name=YE0643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0643
AM286415.1	EMBL	CDS	740349	741152	.	+	0	ID=cds609;Parent=gene645;Dbxref=EnsemblGenomes-Gn:YE0643,EnsemblGenomes-Tr:CAL10754,InterPro:IPR025320,UniProtKB/TrEMBL:A1JJG6,NCBI_GP:CAL10754.1;Name=CAL10754.1;Note=Weakly similar to Yersinia pestis hypothetical protein Ypo2963 SWALL:Q8ZCL9 (EMBL:AJ414154) (282 aa) fasta scores: E(): 3.7e-12%2C 27.02 38d in 259 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414154;product=putative membrane protein;protein_id=CAL10754.1;transl_table=11
AM286415.1	EMBL	sequence_feature	740688	740756	.	+	.	ID=id1258;Note=1 probable transmembrane helix predicted for YE0643 by TMHMM2.0 at aa 114-136;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	741654	743315	.	-	.	ID=gene646;Name=YE0644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0644
AM286415.1	EMBL	CDS	741654	743315	.	-	0	ID=cds610;Parent=gene646;Dbxref=EnsemblGenomes-Gn:YE0644,EnsemblGenomes-Tr:CAL10755,GOA:A1JJG7,InterPro:IPR000914,InterPro:IPR011991,InterPro:IPR023767,InterPro:IPR025370,NCBI_GP:CAL10755.1;Name=CAL10755.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10755.1;transl_table=11
AM286415.1	EMBL	sequence_feature	741672	743051	.	-	.	ID=id1259;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score -155.9%2C E-value 7.8e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	sequence_feature	743181	743246	.	-	.	ID=id1260;Note=Predicted helix-turn-helix motif with score 1676.000%2C SD 4.90 at aa 24-45%2C sequence TTLQELAEVLCCSRRHVRSLLG;gbkey=misc_feature
AM286415.1	EMBL	gene	743440	744339	.	+	.	ID=gene647;Name=YE0645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0645
AM286415.1	EMBL	CDS	743440	744339	.	+	0	ID=cds611;Parent=gene647;Dbxref=EnsemblGenomes-Gn:YE0645,EnsemblGenomes-Tr:CAL10756,GOA:A1JJG8,InterPro:IPR001989,InterPro:IPR007197,InterPro:IPR012839,InterPro:IPR017896,UniProtKB/TrEMBL:A1JJG8,NCBI_GP:CAL10756.1;Name=CAL10756.1;Note=Similar to many pyruvate formate-lyase 3 activating enzymes including: Escherichia coli putative YbiY or b0824 SWALL:PFLE_ECOLI (SWALL:P75794) (308 aa) fasta scores: E(): 6.9e-78%2C 63.88 38d in 299 aa and to Salmonella typhi putative YbiY or Sty0883 SWALL:Q8Z867 (EMBL:AL627268) (299 aa) fasta scores: E(): 3.2e-79%2C64.54 38d in 299 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75794;product=putative pyruvate formate-lyase 3 activating enzyme;protein_id=CAL10756.1;transl_table=11
AM286415.1	EMBL	sequence_feature	743443	743538	.	+	.	ID=id1261;Note=Pfam match to entry PF02143 Radical_activat%2CRadical activating enzyme%2C score 55.5%2C E-value 7.3e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF02143
AM286415.1	EMBL	sequence_feature	743476	743541	.	+	.	ID=id1262;Note=PS01087 Radical activating enzymes signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01087
AM286415.1	EMBL	gene	744344	746776	.	+	.	ID=gene648;Name=YE0646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0646
AM286415.1	EMBL	CDS	744344	746776	.	+	0	ID=cds612;Parent=gene648;Dbxref=EnsemblGenomes-Gn:YE0646,EnsemblGenomes-Tr:CAL10757,GOA:A1JJG9,InterPro:IPR001150,InterPro:IPR004184,InterPro:IPR010098,InterPro:IPR019777,UniProtKB/TrEMBL:A1JJG9,NCBI_GP:CAL10757.1;Name=CAL10757.1;Note=Similar to Escherichia coli putative formate acetyltransferase 3 YbiW or b0823 SWALL:PFLF_ECOLI (SWALL:P75793) (810 aa) fasta scores: E(): 0%2C 84.56 38d in 810 aa%2C and to Salmonella typhimurium putative pyruvate formate lyase pflf or stm0843 SWALL:Q8ZQM6 (EMBL:AE008735) (810 aa) fasta scores: E(): 0%2C 84.44 38d in 810 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75793;product=putative formate acetyltransferase;protein_id=CAL10757.1;transl_table=11
AM286415.1	EMBL	sequence_feature	744365	746356	.	+	.	ID=id1263;Note=Pfam match to entry PF02901 PFL%2C Pyruvate formate lyase%2C score 1027.8%2C E-value 0;gbkey=misc_feature;inference=protein motif:PFAM:PF02901
AM286415.1	EMBL	sequence_feature	746402	746728	.	+	.	ID=id1264;Note=Pfam match to entry PF01228 Gly_radical%2C Glycine radical%2C score 66.1%2C E-value 4.7e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF01228
AM286415.1	EMBL	sequence_feature	746684	746710	.	+	.	ID=id1265;Note=PS00850 Glycine radical signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00850
AM286415.1	EMBL	gene	746972	747175	.	+	.	ID=gene649;Name=YE0647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0647
AM286415.1	EMBL	CDS	746972	747175	.	+	0	ID=cds613;Parent=gene649;Dbxref=EnsemblGenomes-Gn:YE0647,EnsemblGenomes-Tr:CAL10758,InterPro:IPR007337,UniProtKB/TrEMBL:A1JJH0,NCBI_GP:CAL10758.1;Name=CAL10758.1;gbkey=CDS;product=putative DNA-damage-inducible protein;protein_id=CAL10758.1;transl_table=11
AM286415.1	EMBL	gene	747546	748727	.	+	.	ID=gene650;Name=setA;gbkey=Gene;gene=setA;gene_biotype=protein_coding;gene_synonym=sotA;locus_tag=YE0648
AM286415.1	EMBL	CDS	747546	748727	.	+	0	ID=cds614;Parent=gene650;Dbxref=EnsemblGenomes-Gn:YE0648,EnsemblGenomes-Tr:CAL10759,GOA:A1JJH1,InterPro:IPR004750,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JJH1,NCBI_GP:CAL10759.1;Name=CAL10759.1;gbkey=CDS;gene=setA;product=sugar efflux transporter;protein_id=CAL10759.1;transl_table=11
AM286415.1	EMBL	sequence_feature	747558	748724	.	+	.	ID=id1266;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -101.0%2C E-value 0.00027;gbkey=misc_feature;gene=setA;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	747582	747650	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	747693	747752	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	747789	747842	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	747858	747926	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	747987	748043	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	748053	748121	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	748197	748256	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	748299	748367	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	748401	748457	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	748467	748535	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	748572	748631	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	748659	748715	.	+	.	ID=id1267;Note=12 probable transmembrane helices predicted for YE0648 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-99%2C 105-127%2C148-166%2C 170-192%2C 218-237%2C 252-274%2C 286-304%2C 308-330%2C343-362 and 372-390;gbkey=misc_feature;gene=setA;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	748884	750146	.	-	.	ID=gene651;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=YE0649
AM286415.1	EMBL	CDS	748884	750146	.	-	0	ID=cds615;Parent=gene651;Dbxref=EnsemblGenomes-Gn:YE0649,EnsemblGenomes-Tr:CAL10760,GOA:A1JJH2,InterPro:IPR002091,InterPro:IPR013059,InterPro:IPR018227,UniProtKB/TrEMBL:A1JJH2,NCBI_GP:CAL10760.1;Name=CAL10760.1;Note=Similar to Escherichia coli tryptophan-specific transport protein Mtr or b3161 SWALL:MTR_ECOLI (SWALL:P22306) (414 aa) fasta scores: E(): 6.2e-122%2C75.98 38d in 404 aa and to Salmonella typhimurium haaap family%2C tryptophan-specific transport protein Mtr or Stm3279 SWALL:Q8ZLT5 (EMBL:AE008851) (414 aa) fasta scores: E(): 7.6e-123%2C 76.73 38d in 404 aa;gbkey=CDS;gene=mtr;inference=similar to sequence:UniProtKB:P22306;product=tryptophan-specific transport protein;protein_id=CAL10760.1;transl_table=11
AM286415.1	EMBL	sequence_feature	748920	750101	.	-	.	ID=id1268;Note=Pfam match to entry PF03222 Trp_Tyr_perm%2CTryptophan/tyrosine permease family%2C score 737.3%2C E-value 4.3e-219;gbkey=misc_feature;gene=mtr;inference=protein motif:PFAM:PF03222
AM286415.1	EMBL	sequence_feature	750021	750089	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	749943	750011	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	749799	749867	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	749688	749756	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	749601	749669	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	749490	749558	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	749385	749453	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	749208	749276	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	749106	749174	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	749028	749096	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	748926	748994	.	-	.	ID=id1269;Note=11 probable transmembrane helices predicted for YE0649 by TMHMM2.0 at aa 20-42%2C 46-68%2C 94-116%2C 131-153%2C160-182%2C 197-219%2C 232-254%2C 291-313%2C 325-347%2C 351-373 and 385-407;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	750255	751655	.	-	.	ID=gene652;Name=tnaA;gbkey=Gene;gene=tnaA;gene_biotype=protein_coding;locus_tag=YE0650
AM286415.1	EMBL	CDS	750255	751655	.	-	0	ID=cds616;Parent=gene652;Dbxref=EnsemblGenomes-Gn:YE0650,EnsemblGenomes-Tr:CAL10761,GOA:A1JJH3,InterPro:IPR001597,InterPro:IPR011166,InterPro:IPR013440,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR018176,NCBI_GP:CAL10761.1;Name=CAL10761.1;Note=Similar to many including: Enterobacter aerogenes tryptophanase TnaA SWALL:TNAA_ENTAE (SWALL:Q59342) (462 aa) fasta scores: E(): 2e-166%2C 85.83 38d in 466 aa and to Proteus vulgaris tryptophanase TnaA SWALL:TNAA_PROVU (SWALL:P28796) (467 aa) fasta scores: E(): 3.1e-138%2C71.39 38d in 465 aa;gbkey=CDS;gene=tnaA;inference=similar to sequence:UniProtKB:Q59342;product=tryptophanase;protein_id=CAL10761.1;transl_table=11
AM286415.1	EMBL	sequence_feature	750261	751652	.	-	.	ID=id1270;Note=Pfam match to entry PF01212 Beta_elim_lyase%2CBeta-eliminating lyase%2C score 1275.8%2C E-value 0;gbkey=misc_feature;gene=tnaA;inference=protein motif:PFAM:PF01212
AM286415.1	EMBL	sequence_feature	750837	750893	.	-	.	ID=id1271;Note=PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=tnaA;inference=protein motif:Prosite:PS00853
AM286415.1	EMBL	gene	752330	752893	.	-	.	ID=gene653;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=YE0651
AM286415.1	EMBL	CDS	752330	752893	.	-	0	ID=cds617;Parent=gene653;Dbxref=EnsemblGenomes-Gn:YE0651,EnsemblGenomes-Tr:CAL10762,GOA:A1JJH4,InterPro:IPR000573,InterPro:IPR004431,InterPro:IPR015928,InterPro:IPR015937,UniProtKB/TrEMBL:A1JJH4,NCBI_GP:CAL10762.1;Name=CAL10762.1;gbkey=CDS;gene=leuD;product=3-isopropylmalate dehydratase small subunit;protein_id=CAL10762.1;transl_table=11
AM286415.1	EMBL	sequence_feature	752423	752890	.	-	.	ID=id1272;Note=Pfam match to entry PF00694 Aconitase_C%2C Aconitase C-terminal domain%2C score 254.2%2C E-value 1.1e-73;gbkey=misc_feature;gene=leuD;inference=protein motif:PFAM:PF00694
AM286415.1	EMBL	gene	752965	754395	.	-	.	ID=gene654;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=YE0652
AM286415.1	EMBL	CDS	752965	754395	.	-	0	ID=cds618;Parent=gene654;Dbxref=EnsemblGenomes-Gn:YE0652,EnsemblGenomes-Tr:CAL10763,GOA:A1JJH5,InterPro:IPR001030,InterPro:IPR004430,InterPro:IPR015931,InterPro:IPR015932,InterPro:IPR015937,InterPro:IPR018136,NCBI_GP:CAL10763.1;Name=CAL10763.1;gbkey=CDS;gene=leuC;product=3-isopropylmalate dehydratase large subunit;protein_id=CAL10763.1;transl_table=11
AM286415.1	EMBL	sequence_feature	753007	754368	.	-	.	ID=id1273;Note=Pfam match to entry PF00330 aconitase%2C Aconitase family (aconitate hydratase)%2C score 916.2%2C E-value 6e-273;gbkey=misc_feature;gene=leuC;inference=protein motif:PFAM:PF00330
AM286415.1	EMBL	sequence_feature	753142	753183	.	-	.	ID=id1274;Note=PS01244 Aconitase family signature 2.;gbkey=misc_feature;gene=leuC;inference=protein motif:Prosite:PS01244
AM286415.1	EMBL	sequence_feature	753313	753363	.	-	.	ID=id1275;Note=PS00450 Aconitase family signature 1.;gbkey=misc_feature;gene=leuC;inference=protein motif:Prosite:PS00450
AM286415.1	EMBL	gene	754397	755494	.	-	.	ID=gene655;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=YE0653
AM286415.1	EMBL	CDS	754397	755494	.	-	0	ID=cds619;Parent=gene655;Dbxref=EnsemblGenomes-Gn:YE0653,EnsemblGenomes-Tr:CAL10764,GOA:A1JJH6,InterPro:IPR001804,InterPro:IPR004429,InterPro:IPR019818,InterPro:IPR024084,UniProtKB/TrEMBL:A1JJH6,NCBI_GP:CAL10764.1;Name=CAL10764.1;gbkey=CDS;gene=leuB;product=3-isopropylmalate dehydrogenase;protein_id=CAL10764.1;transl_table=11
AM286415.1	EMBL	sequence_feature	754424	755473	.	-	.	ID=id1276;Note=Pfam match to entry PF00180 isodh%2CIsocitrate/isopropylmalate dehydrogenase%2C score 718.1%2CE-value 2.7e-213;gbkey=misc_feature;gene=leuB;inference=protein motif:PFAM:PF00180
AM286415.1	EMBL	sequence_feature	754691	754750	.	-	.	ID=id1277;Note=PS00470 Isocitrate and isopropylmalate dehydrogenases signature.;gbkey=misc_feature;gene=leuB;inference=protein motif:Prosite:PS00470
AM286415.1	EMBL	sequence_feature	755294	755326	.	-	.	ID=id1278;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=leuB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	755491	757053	.	-	.	ID=gene656;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=YE0654
AM286415.1	EMBL	CDS	755491	757053	.	-	0	ID=cds620;Parent=gene656;Dbxref=EnsemblGenomes-Gn:YE0654,EnsemblGenomes-Tr:CAL10765,GOA:A1JJH7,InterPro:IPR000891,InterPro:IPR002034,InterPro:IPR005671,InterPro:IPR013709,InterPro:IPR013785,NCBI_GP:CAL10765.1;Name=CAL10765.1;gbkey=CDS;gene=leuA;product=2-isopropylmalate synthase;protein_id=CAL10765.1;transl_table=11
AM286415.1	EMBL	sequence_feature	756187	757023	.	-	.	ID=id1279;Note=Pfam match to entry PF00682 HMGL-like%2C HMGL-like %2Cscore 506.9%2C E-value 1e-149;gbkey=misc_feature;gene=leuA;inference=protein motif:PFAM:PF00682
AM286415.1	EMBL	sequence_feature	756418	756459	.	-	.	ID=id1280;Note=PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2.;gbkey=misc_feature;gene=leuA;inference=protein motif:Prosite:PS00816
AM286415.1	EMBL	sequence_feature	756970	757020	.	-	.	ID=id1281;Note=PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1.;gbkey=misc_feature;gene=leuA;inference=protein motif:Prosite:PS00815
AM286415.1	EMBL	gene	758158	759114	.	+	.	ID=gene657;Name=leuO;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=YE0655
AM286415.1	EMBL	CDS	758158	759114	.	+	0	ID=cds621;Parent=gene657;Dbxref=EnsemblGenomes-Gn:YE0655,EnsemblGenomes-Tr:CAL10766,GOA:A1JJH8,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJH8,NCBI_GP:CAL10766.1;Name=CAL10766.1;gbkey=CDS;gene=leuO;product=LysR-family transcriptional regulator LeuO;protein_id=CAL10766.1;transl_table=11
AM286415.1	EMBL	sequence_feature	758236	758415	.	+	.	ID=id1282;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 88.2%2C E-value 1.1e-23;gbkey=misc_feature;gene=leuO;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	758275	758340	.	+	.	ID=id1283;Note=Predicted helix-turn-helix motif with score 1654.000%2C SD 4.82 at aa 40-61%2C sequence HNVTRAAQSLGMSQPAVSNAVA;gbkey=misc_feature;gene=leuO
AM286415.1	EMBL	sequence_feature	758278	758370	.	+	.	ID=id1284;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=leuO;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	758485	759102	.	+	.	ID=id1285;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 53.1%2C E-value 4e-13;gbkey=misc_feature;gene=leuO;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	759447	761246	.	+	.	ID=gene658;Name=YE0656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0656
AM286415.1	EMBL	CDS	759447	761246	.	+	0	ID=cds622;Parent=gene658;Dbxref=EnsemblGenomes-Gn:YE0656,EnsemblGenomes-Tr:CAL10767,GOA:A1JJH9,InterPro:IPR000873,InterPro:IPR020845,UniProtKB/TrEMBL:A1JJH9,NCBI_GP:CAL10767.1;Name=CAL10767.1;gbkey=CDS;product=putative AMP-binding enzyme-family protein;protein_id=CAL10767.1;transl_table=11
AM286415.1	EMBL	sequence_feature	759561	760928	.	+	.	ID=id1286;Note=Pfam match to entry PF00501 AMP-binding%2CAMP-binding enzyme%2C score 289.9%2C E-value 2.1e-84;gbkey=misc_feature;inference=protein motif:PFAM:PF00501
AM286415.1	EMBL	sequence_feature	759999	760034	.	+	.	ID=id1287;Note=PS00455 Putative AMP-binding domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00455
AM286415.1	EMBL	gene	761712	763439	.	+	.	ID=gene659;Name=ilvI;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=YE0658
AM286415.1	EMBL	CDS	761712	763439	.	+	0	ID=cds623;Parent=gene659;Dbxref=EnsemblGenomes-Gn:YE0658,EnsemblGenomes-Tr:CAL10768,GOA:A1JJI0,InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012846,InterPro:IPR029035,InterPro:IPR029061,UniProtKB/TrEMBL:A1JJI0,NCBI_GP:CAL10768.1;Name=CAL10768.1;gbkey=CDS;gene=ilvI;product=acetolactate synthase isozyme III large subunit;protein_id=CAL10768.1;transl_table=11
AM286415.1	EMBL	sequence_feature	761715	762233	.	+	.	ID=id1288;Note=Pfam match to entry PF02776 TPP_enzymes_N%2C Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain %2Cscore 351.5%2C E-value 5.9e-103;gbkey=misc_feature;gene=ilvI;inference=protein motif:PFAM:PF02776
AM286415.1	EMBL	sequence_feature	761901	761993	.	+	.	ID=id1289;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=ilvI;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	762285	762773	.	+	.	ID=id1290;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzyme%2C central domain%2C score 232.8%2CE-value 3.2e-67;gbkey=misc_feature;gene=ilvI;inference=protein motif:PFAM:PF00205
AM286415.1	EMBL	sequence_feature	762813	763343	.	+	.	ID=id1291;Note=Pfam match to entry PF02775 TPP_enzymes_C%2C Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain %2Cscore 324.6%2C E-value 7.5e-95;gbkey=misc_feature;gene=ilvI;inference=protein motif:PFAM:PF02775
AM286415.1	EMBL	sequence_feature	763002	763061	.	+	.	ID=id1292;Note=PS00187 Thiamine pyrophosphate enzymes signature.;gbkey=misc_feature;gene=ilvI;inference=protein motif:Prosite:PS00187
AM286415.1	EMBL	gene	763442	763936	.	+	.	ID=gene660;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=YE0659
AM286415.1	EMBL	CDS	763442	763936	.	+	0	ID=cds624;Parent=gene660;Dbxref=EnsemblGenomes-Gn:YE0659,EnsemblGenomes-Tr:CAL10769,GOA:A1JJI1,InterPro:IPR002912,InterPro:IPR004789,InterPro:IPR019455,UniProtKB/TrEMBL:A1JJI1,NCBI_GP:CAL10769.1;Name=CAL10769.1;gbkey=CDS;gene=ilvH;product=acetolactate synthase isozyme III small subunit;protein_id=CAL10769.1;transl_table=11
AM286415.1	EMBL	sequence_feature	763442	763558	.	+	.	ID=id1293;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;gene=ilvH;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	sequence_feature	763451	763672	.	+	.	ID=id1294;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 64.1%2C E-value 1.9e-16;gbkey=misc_feature;gene=ilvH;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	gene	764279	765283	.	+	.	ID=gene661;Name=fruR;gbkey=Gene;gene=fruR;gene_biotype=protein_coding;gene_synonym=cra,fruC,shl;locus_tag=YE0661
AM286415.1	EMBL	CDS	764279	765283	.	+	0	ID=cds625;Parent=gene661;Dbxref=EnsemblGenomes-Gn:YE0661,EnsemblGenomes-Tr:CAL10770,GOA:A1JJI2,InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,InterPro:IPR012781,InterPro:IPR028082,UniProtKB/TrEMBL:A1JJI2,NCBI_GP:CAL10770.1;Name=CAL10770.1;gbkey=CDS;gene=fruR;product=putative fructose repressor;protein_id=CAL10770.1;transl_table=11
AM286415.1	EMBL	sequence_feature	764279	764356	.	+	.	ID=id1295;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 35.3%2C E-value 8.9e-08;gbkey=misc_feature;gene=fruR;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	764279	764344	.	+	.	ID=id1296;Note=Predicted helix-turn-helix motif with score 1821.000%2C SD 5.39 at aa 1-22%2C sequence MKLDEIARLAGVSRTTASYVIN;gbkey=misc_feature;gene=fruR
AM286415.1	EMBL	sequence_feature	764285	764341	.	+	.	ID=id1297;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=fruR;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	sequence_feature	764459	765265	.	+	.	ID=id1298;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 20.5%2C E-value 7.8e-07;gbkey=misc_feature;gene=fruR;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	765339	765785	.	-	.	ID=gene662;Name=YE0662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0662
AM286415.1	EMBL	CDS	765339	765785	.	-	0	ID=cds626;Parent=gene662;Dbxref=EnsemblGenomes-Gn:YE0662,EnsemblGenomes-Tr:CAL10771,GOA:A1JJI3,InterPro:IPR010574,UniProtKB/TrEMBL:A1JJI3,NCBI_GP:CAL10771.1;Name=CAL10771.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10771.1;transl_table=11
AM286415.1	EMBL	sequence_feature	765681	765749	.	-	.	ID=id1299;Note=4 probable transmembrane helices predicted for YE0662 by TMHMM2.0 at aa 13-35%2C 45-64%2C 85-107 and 113-135;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	765594	765653	.	-	.	ID=id1299;Note=4 probable transmembrane helices predicted for YE0662 by TMHMM2.0 at aa 13-35%2C 45-64%2C 85-107 and 113-135;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	765465	765533	.	-	.	ID=id1299;Note=4 probable transmembrane helices predicted for YE0662 by TMHMM2.0 at aa 13-35%2C 45-64%2C 85-107 and 113-135;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	765381	765449	.	-	.	ID=id1299;Note=4 probable transmembrane helices predicted for YE0662 by TMHMM2.0 at aa 13-35%2C 45-64%2C 85-107 and 113-135;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	766702	767160	.	+	.	ID=gene663;Name=YE0663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0663
AM286415.1	EMBL	CDS	766702	767160	.	+	0	ID=cds627;Parent=gene663;Dbxref=EnsemblGenomes-Gn:YE0663,EnsemblGenomes-Tr:CAL10772,GOA:A1JJI4,InterPro:IPR003444,InterPro:IPR020603,NCBI_GP:CAL10772.1;Name=CAL10772.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10772.1;transl_table=11
AM286415.1	EMBL	sequence_feature	766702	766929	.	+	.	ID=id1300;Note=Pfam match to entry PF02381 UPF0040%2C Domain of unknown function UPF0040 family%2C score 97.5%2C E-value 1.7e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF02381
AM286415.1	EMBL	sequence_feature	766930	767151	.	+	.	ID=id1301;Note=Pfam match to entry PF02381 UPF0040%2C Domain of unknown function UPF0040 family%2C score 85.9%2C E-value 5.5e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF02381
AM286415.1	EMBL	gene	767163	768125	.	+	.	ID=gene664;Name=YE0664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0664
AM286415.1	EMBL	CDS	767163	768125	.	+	0	ID=cds628;Parent=gene664;Dbxref=EnsemblGenomes-Gn:YE0664,EnsemblGenomes-Tr:CAL10773,GOA:A1JJI5,InterPro:IPR002903,InterPro:IPR023397,InterPro:IPR029063,NCBI_GP:CAL10773.1;Name=CAL10773.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10773.1;transl_table=11
AM286415.1	EMBL	sequence_feature	767196	768116	.	+	.	ID=id1302;Note=Pfam match to entry PF01795 Methyltransf_5%2C MraW methylase family%2C score 583.2%2C E-value 1.1e-172;gbkey=misc_feature;inference=protein motif:PFAM:PF01795
AM286415.1	EMBL	gene	768122	768442	.	+	.	ID=gene665;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;gene_synonym=mraR;locus_tag=YE0665
AM286415.1	EMBL	CDS	768122	768442	.	+	0	ID=cds629;Parent=gene665;Dbxref=EnsemblGenomes-Gn:YE0665,EnsemblGenomes-Tr:CAL10774,GOA:A1JJI6,InterPro:IPR011922,UniProtKB/TrEMBL:A1JJI6,NCBI_GP:CAL10774.1;Name=CAL10774.1;gbkey=CDS;gene=ftsL;product=putative cell division protein;protein_id=CAL10774.1;transl_table=11
AM286415.1	EMBL	sequence_feature	768188	768247	.	+	.	ID=id1303;Note=1 probable transmembrane helix predicted for YE0665 by TMHMM2.0 at aa 23-42;gbkey=misc_feature;gene=ftsL;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	768503	770266	.	+	.	ID=gene666;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;gene_synonym=pbpB;locus_tag=YE0666
AM286415.1	EMBL	CDS	768503	770266	.	+	0	ID=cds630;Parent=gene666;Dbxref=EnsemblGenomes-Gn:YE0666,EnsemblGenomes-Tr:CAL10775,GOA:A1JJI7,InterPro:IPR001460,InterPro:IPR005311,InterPro:IPR012338,UniProtKB/TrEMBL:A1JJI7,NCBI_GP:CAL10775.1;Name=CAL10775.1;gbkey=CDS;gene=ftsI;product=penicillin-binding protein 3;protein_id=CAL10775.1;transl_table=11
AM286415.1	EMBL	sequence_feature	768563	768631	.	+	.	ID=id1304;Note=1 probable transmembrane helix predicted for YE0666 by TMHMM2.0 at aa 21-43;gbkey=misc_feature;gene=ftsI;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	768695	769165	.	+	.	ID=id1305;Note=Pfam match to entry PF03717 PBP_dimer%2CPenicillin-binding Protein dimerisation domain%2C score 212.4%2C E-value 4.3e-61;gbkey=misc_feature;gene=ftsI;inference=protein motif:PFAM:PF03717
AM286415.1	EMBL	sequence_feature	769211	770155	.	+	.	ID=id1306;Note=Pfam match to entry PF00905 Transpeptidase%2CPenicillin binding protein transpeptidase domain%2C score 435.0%2C E-value 4.3e-128;gbkey=misc_feature;gene=ftsI;inference=protein motif:PFAM:PF00905
AM286415.1	EMBL	gene	770268	771740	.	+	.	ID=gene667;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=YE0667
AM286415.1	EMBL	CDS	770268	771740	.	+	0	ID=cds631;Parent=gene667;Dbxref=EnsemblGenomes-Gn:YE0667,EnsemblGenomes-Tr:CAL10776,GOA:A1JJI8,InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005761,InterPro:IPR013221,UniProtKB/TrEMBL:A1JJI8,NCBI_GP:CAL10776.1;Name=CAL10776.1;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-dia minopimelate ligase;protein_id=CAL10776.1;transl_table=11
AM286415.1	EMBL	sequence_feature	770268	770279	.	+	.	ID=id1307;Note=PS00228 Tubulin-beta mRNA autoregulation signal.;gbkey=misc_feature;gene=murE;inference=protein motif:Prosite:PS00228
AM286415.1	EMBL	sequence_feature	770376	771245	.	+	.	ID=id1308;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C catalytic domain%2C score 269.0%2C E-value 3.9e-78;gbkey=misc_feature;gene=murE;inference=protein motif:PFAM:PF01225
AM286415.1	EMBL	sequence_feature	771267	771533	.	+	.	ID=id1309;Note=Pfam match to entry PF02875 Mur_ligase_C%2C Mur ligase family%2C glutamate ligase domain%2C score 138.8%2CE-value 6.3e-39;gbkey=misc_feature;gene=murE;inference=protein motif:PFAM:PF02875
AM286415.1	EMBL	gene	771737	773101	.	+	.	ID=gene668;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;gene_synonym=mra;locus_tag=YE0668
AM286415.1	EMBL	CDS	771737	773101	.	+	0	ID=cds632;Parent=gene668;Dbxref=EnsemblGenomes-Gn:YE0668,EnsemblGenomes-Tr:CAL10777,GOA:A1JJI9,InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005863,InterPro:IPR013221,UniProtKB/TrEMBL:A1JJI9,NCBI_GP:CAL10777.1;Name=CAL10777.1;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diami nopimelate--D-alanyl-D-alanyl ligase;protein_id=CAL10777.1;transl_table=11
AM286415.1	EMBL	sequence_feature	771845	772657	.	+	.	ID=id1310;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C catalytic domain%2C score 258.0%2C E-value 8.2e-75;gbkey=misc_feature;gene=murF;inference=protein motif:PFAM:PF01225
AM286415.1	EMBL	sequence_feature	772679	772948	.	+	.	ID=id1311;Note=Pfam match to entry PF02875 Mur_ligase_C%2C Mur ligase family%2C glutamate ligase domain%2C score 73.9%2CE-value 2.2e-19;gbkey=misc_feature;gene=murF;inference=protein motif:PFAM:PF02875
AM286415.1	EMBL	gene	773095	774177	.	+	.	ID=gene669;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;gene_synonym=murX;locus_tag=YE0669
AM286415.1	EMBL	CDS	773095	774177	.	+	0	ID=cds633;Parent=gene669;Dbxref=EnsemblGenomes-Gn:YE0669,EnsemblGenomes-Tr:CAL10778,GOA:A1JJJ0,InterPro:IPR000715,InterPro:IPR003524,InterPro:IPR018480,NCBI_GP:CAL10778.1;Name=CAL10778.1;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide-transfera se;protein_id=CAL10778.1;transl_table=11
AM286415.1	EMBL	sequence_feature	773170	773238	.	+	.	ID=id1312;Note=10 probable transmembrane helices predicted for YE0669 by TMHMM2.0 at aa 26-48%2C 75-92%2C 97-114%2C 134-151%2C171-193%2C 200-219%2C 234-256%2C 263-285%2C 289-311 and 338-357;gbkey=misc_feature;gene=mraY;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	773317	773370	.	+	.	ID=id1312;Note=10 probable transmembrane helices predicted for YE0669 by TMHMM2.0 at aa 26-48%2C 75-92%2C 97-114%2C 134-151%2C171-193%2C 200-219%2C 234-256%2C 263-285%2C 289-311 and 338-357;gbkey=misc_feature;gene=mraY;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	773383	773436	.	+	.	ID=id1312;Note=10 probable transmembrane helices predicted for YE0669 by TMHMM2.0 at aa 26-48%2C 75-92%2C 97-114%2C 134-151%2C171-193%2C 200-219%2C 234-256%2C 263-285%2C 289-311 and 338-357;gbkey=misc_feature;gene=mraY;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	773494	773547	.	+	.	ID=id1312;Note=10 probable transmembrane helices predicted for YE0669 by TMHMM2.0 at aa 26-48%2C 75-92%2C 97-114%2C 134-151%2C171-193%2C 200-219%2C 234-256%2C 263-285%2C 289-311 and 338-357;gbkey=misc_feature;gene=mraY;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	773605	773673	.	+	.	ID=id1312;Note=10 probable transmembrane helices predicted for YE0669 by TMHMM2.0 at aa 26-48%2C 75-92%2C 97-114%2C 134-151%2C171-193%2C 200-219%2C 234-256%2C 263-285%2C 289-311 and 338-357;gbkey=misc_feature;gene=mraY;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	773692	773751	.	+	.	ID=id1312;Note=10 probable transmembrane helices predicted for YE0669 by TMHMM2.0 at aa 26-48%2C 75-92%2C 97-114%2C 134-151%2C171-193%2C 200-219%2C 234-256%2C 263-285%2C 289-311 and 338-357;gbkey=misc_feature;gene=mraY;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	773794	773862	.	+	.	ID=id1312;Note=10 probable transmembrane helices predicted for YE0669 by TMHMM2.0 at aa 26-48%2C 75-92%2C 97-114%2C 134-151%2C171-193%2C 200-219%2C 234-256%2C 263-285%2C 289-311 and 338-357;gbkey=misc_feature;gene=mraY;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	773881	773949	.	+	.	ID=id1312;Note=10 probable transmembrane helices predicted for YE0669 by TMHMM2.0 at aa 26-48%2C 75-92%2C 97-114%2C 134-151%2C171-193%2C 200-219%2C 234-256%2C 263-285%2C 289-311 and 338-357;gbkey=misc_feature;gene=mraY;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	773959	774027	.	+	.	ID=id1312;Note=10 probable transmembrane helices predicted for YE0669 by TMHMM2.0 at aa 26-48%2C 75-92%2C 97-114%2C 134-151%2C171-193%2C 200-219%2C 234-256%2C 263-285%2C 289-311 and 338-357;gbkey=misc_feature;gene=mraY;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	774106	774165	.	+	.	ID=id1312;Note=10 probable transmembrane helices predicted for YE0669 by TMHMM2.0 at aa 26-48%2C 75-92%2C 97-114%2C 134-151%2C171-193%2C 200-219%2C 234-256%2C 263-285%2C 289-311 and 338-357;gbkey=misc_feature;gene=mraY;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	773386	773964	.	+	.	ID=id1313;Note=Pfam match to entry PF00953 Glycos_transf_4%2CGlycosyl transferase%2C score 288.5%2C E-value 5.4e-84;gbkey=misc_feature;gene=mraY;inference=protein motif:PFAM:PF00953
AM286415.1	EMBL	gene	774180	775514	.	+	.	ID=gene670;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=YE0670
AM286415.1	EMBL	CDS	774180	775514	.	+	0	ID=cds634;Parent=gene670;Dbxref=EnsemblGenomes-Gn:YE0670,EnsemblGenomes-Tr:CAL10779,GOA:A1JJJ1,InterPro:IPR004101,InterPro:IPR005762,InterPro:IPR013221,InterPro:IPR016040,UniProtKB/TrEMBL:A1JJJ1,NCBI_GP:CAL10779.1;Name=CAL10779.1;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=CAL10779.1;transl_table=11
AM286415.1	EMBL	sequence_feature	774204	774272	.	+	.	ID=id1314;Note=1 probable transmembrane helix predicted for YE0670 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;gene=murD;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	774210	774242	.	+	.	ID=id1315;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=murD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	774303	775073	.	+	.	ID=id1316;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C catalytic domain%2C score 204.8%2C E-value 8.4e-59;gbkey=misc_feature;gene=murD;inference=protein motif:PFAM:PF01225
AM286415.1	EMBL	sequence_feature	774513	774560	.	+	.	ID=id1317;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=murD;inference=protein motif:Prosite:PS00012
AM286415.1	EMBL	sequence_feature	775095	775334	.	+	.	ID=id1318;Note=Pfam match to entry PF02875 Mur_ligase_C%2C Mur ligase family%2C glutamate ligase domain%2C score 52.1%2CE-value 8e-13;gbkey=misc_feature;gene=murD;inference=protein motif:PFAM:PF02875
AM286415.1	EMBL	gene	775514	776716	.	+	.	ID=gene671;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=YE0671
AM286415.1	EMBL	CDS	775514	776716	.	+	0	ID=cds635;Parent=gene671;Dbxref=EnsemblGenomes-Gn:YE0671,EnsemblGenomes-Tr:CAL10780,GOA:A1JJJ2,InterPro:IPR001182,InterPro:IPR013437,InterPro:IPR018365,UniProtKB/TrEMBL:A1JJJ2,NCBI_GP:CAL10780.1;Name=CAL10780.1;gbkey=CDS;gene=ftsW;product=cell division protein FtsW;protein_id=CAL10780.1;transl_table=11
AM286415.1	EMBL	sequence_feature	775607	776680	.	+	.	ID=id1319;Note=Pfam match to entry PF01098 FTSW_RODA_SPOVE%2C Cell cycle protein%2C score 592.7%2C E-value 1.4e-175;gbkey=misc_feature;gene=ftsW;inference=protein motif:PFAM:PF01098
AM286415.1	EMBL	sequence_feature	775616	775684	.	+	.	ID=id1320;Note=8 probable transmembrane helices predicted for YE0671 by TMHMM2.0 at aa 35-57%2C 72-89%2C 96-118%2C 170-192%2C205-227%2C 293-315%2C 327-349 and 359-381;gbkey=misc_feature;gene=ftsW;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	775727	775780	.	+	.	ID=id1320;Note=8 probable transmembrane helices predicted for YE0671 by TMHMM2.0 at aa 35-57%2C 72-89%2C 96-118%2C 170-192%2C205-227%2C 293-315%2C 327-349 and 359-381;gbkey=misc_feature;gene=ftsW;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	775799	775867	.	+	.	ID=id1320;Note=8 probable transmembrane helices predicted for YE0671 by TMHMM2.0 at aa 35-57%2C 72-89%2C 96-118%2C 170-192%2C205-227%2C 293-315%2C 327-349 and 359-381;gbkey=misc_feature;gene=ftsW;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	776021	776089	.	+	.	ID=id1320;Note=8 probable transmembrane helices predicted for YE0671 by TMHMM2.0 at aa 35-57%2C 72-89%2C 96-118%2C 170-192%2C205-227%2C 293-315%2C 327-349 and 359-381;gbkey=misc_feature;gene=ftsW;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	776126	776194	.	+	.	ID=id1320;Note=8 probable transmembrane helices predicted for YE0671 by TMHMM2.0 at aa 35-57%2C 72-89%2C 96-118%2C 170-192%2C205-227%2C 293-315%2C 327-349 and 359-381;gbkey=misc_feature;gene=ftsW;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	776390	776458	.	+	.	ID=id1320;Note=8 probable transmembrane helices predicted for YE0671 by TMHMM2.0 at aa 35-57%2C 72-89%2C 96-118%2C 170-192%2C205-227%2C 293-315%2C 327-349 and 359-381;gbkey=misc_feature;gene=ftsW;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	776492	776560	.	+	.	ID=id1320;Note=8 probable transmembrane helices predicted for YE0671 by TMHMM2.0 at aa 35-57%2C 72-89%2C 96-118%2C 170-192%2C205-227%2C 293-315%2C 327-349 and 359-381;gbkey=misc_feature;gene=ftsW;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	776588	776656	.	+	.	ID=id1320;Note=8 probable transmembrane helices predicted for YE0671 by TMHMM2.0 at aa 35-57%2C 72-89%2C 96-118%2C 170-192%2C205-227%2C 293-315%2C 327-349 and 359-381;gbkey=misc_feature;gene=ftsW;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	776546	776620	.	+	.	ID=id1321;Note=PS00428 Cell cycle proteins ftsW / rodA / spoVE signature.;gbkey=misc_feature;gene=ftsW;inference=protein motif:Prosite:PS00428
AM286415.1	EMBL	gene	776713	777780	.	+	.	ID=gene672;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=YE0672
AM286415.1	EMBL	CDS	776713	777780	.	+	0	ID=cds636;Parent=gene672;Dbxref=EnsemblGenomes-Gn:YE0672,EnsemblGenomes-Tr:CAL10781,GOA:A1JJJ3,InterPro:IPR004276,InterPro:IPR006009,InterPro:IPR007235,NCBI_GP:CAL10781.1;Name=CAL10781.1;gbkey=CDS;gene=murG;product=UDP-N-acetylglucosamine:N-acetylmuramyl-(pentap eptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=CAL10781.1;transl_table=11
AM286415.1	EMBL	sequence_feature	776734	777543	.	+	.	ID=id1322;Note=Pfam match to entry PF03033 Glyco_transf_28%2CGlycosyltransferase family 28 N-terminal domain%2C score 442.7%2C E-value 2e-130;gbkey=misc_feature;gene=murG;inference=protein motif:PFAM:PF03033
AM286415.1	EMBL	gene	777854	779329	.	+	.	ID=gene673;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=YE0673
AM286415.1	EMBL	CDS	777854	779329	.	+	0	ID=cds637;Parent=gene673;Dbxref=EnsemblGenomes-Gn:YE0673,EnsemblGenomes-Tr:CAL10782,GOA:A1JJJ4,InterPro:IPR000713,InterPro:IPR004101,InterPro:IPR005758,InterPro:IPR013221,InterPro:IPR016040,NCBI_GP:CAL10782.1;Name=CAL10782.1;gbkey=CDS;gene=murC;product=UDP-N-acetylmuramate--alanine ligase;protein_id=CAL10782.1;transl_table=11
AM286415.1	EMBL	sequence_feature	777914	777973	.	+	.	ID=id1323;Note=1 probable transmembrane helix predicted for YE0673 by TMHMM2.0 at aa 21-40;gbkey=misc_feature;gene=murC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	778016	778801	.	+	.	ID=id1324;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C catalytic domain%2C score 239.3%2C E-value 3.6e-69;gbkey=misc_feature;gene=murC;inference=protein motif:PFAM:PF01225
AM286415.1	EMBL	sequence_feature	778823	779119	.	+	.	ID=id1325;Note=Pfam match to entry PF02875 Mur_ligase_C%2C Mur ligase family%2C glutamate ligase domain%2C score 91.7%2CE-value 9.4e-25;gbkey=misc_feature;gene=murC;inference=protein motif:PFAM:PF02875
AM286415.1	EMBL	gene	779322	780242	.	+	.	ID=gene674;Name=ddlB;gbkey=Gene;gene=ddlB;gene_biotype=protein_coding;gene_synonym=ddl;locus_tag=YE0674
AM286415.1	EMBL	CDS	779322	780242	.	+	0	ID=cds638;Parent=gene674;Dbxref=EnsemblGenomes-Gn:YE0674,EnsemblGenomes-Tr:CAL10783,GOA:A1JJJ5,InterPro:IPR000291,InterPro:IPR005905,InterPro:IPR011095,InterPro:IPR011127,InterPro:IPR011761,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR016185,UniProtKB/TrEMBL:A1JJJ5,NCBI_GP:CAL10783.1;Name=CAL10783.1;gbkey=CDS;gene=ddlB;product=D-alanine--D-alanine ligase B;protein_id=CAL10783.1;transl_table=11
AM286415.1	EMBL	sequence_feature	779328	780230	.	+	.	ID=id1326;Note=Pfam match to entry PF01820 Dala_Dala_ligas%2C D-ala D-ala ligase%2C score 508.3%2C E-value 3.7e-150;gbkey=misc_feature;gene=ddlB;inference=protein motif:PFAM:PF01820
AM286415.1	EMBL	sequence_feature	779508	779543	.	+	.	ID=id1327;Note=PS00843 D-alanine--D-alanine ligase signature 1.;gbkey=misc_feature;gene=ddlB;inference=protein motif:Prosite:PS00843
AM286415.1	EMBL	sequence_feature	779562	779579	.	+	.	ID=id1328;Note=PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide.;gbkey=misc_feature;gene=ddlB;inference=protein motif:Prosite:PS00343
AM286415.1	EMBL	sequence_feature	780063	780149	.	+	.	ID=id1329;Note=PS00844 D-alanine--D-alanine ligase signature 2.;gbkey=misc_feature;gene=ddlB;inference=protein motif:Prosite:PS00844
AM286415.1	EMBL	gene	780244	781101	.	+	.	ID=gene675;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=YE0675
AM286415.1	EMBL	CDS	780244	781101	.	+	0	ID=cds639;Parent=gene675;Dbxref=EnsemblGenomes-Gn:YE0675,EnsemblGenomes-Tr:CAL10784,GOA:A1JJJ6,InterPro:IPR005548,InterPro:IPR013685,InterPro:IPR026579,PDB:2VH2,UniProtKB/TrEMBL:A1JJJ6,NCBI_GP:CAL10784.1;Name=CAL10784.1;gbkey=CDS;gene=ftsQ;product=cell division protein FtsQ;protein_id=CAL10784.1;transl_table=11
AM286415.1	EMBL	sequence_feature	780319	780387	.	+	.	ID=id1330;Note=1 probable transmembrane helix predicted for YE0675 by TMHMM2.0 at aa 26-48;gbkey=misc_feature;gene=ftsQ;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	780322	780975	.	+	.	ID=id1331;Note=Pfam match to entry PF03799 FtsQ%2C Cell division protein FtsQ%2C score 220.9%2C E-value 1.2e-63;gbkey=misc_feature;gene=ftsQ;inference=protein motif:PFAM:PF03799
AM286415.1	EMBL	gene	781098	782354	.	+	.	ID=gene676;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;gene_synonym=divA;locus_tag=YE0676
AM286415.1	EMBL	CDS	781098	782354	.	+	0	ID=cds640;Parent=gene676;Dbxref=EnsemblGenomes-Gn:YE0676,EnsemblGenomes-Tr:CAL10785,GOA:A1JJJ7,InterPro:IPR003494,InterPro:IPR020823,UniProtKB/TrEMBL:A1JJJ7,NCBI_GP:CAL10785.1;Name=CAL10785.1;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=CAL10785.1;transl_table=11
AM286415.1	EMBL	sequence_feature	781125	781688	.	+	.	ID=id1332;Note=Pfam match to entry PF02491 FtsA%2C Cell division protein FtsA%2C score 252.6%2C E-value 3.6e-73;gbkey=misc_feature;gene=ftsA;inference=protein motif:PFAM:PF02491
AM286415.1	EMBL	sequence_feature	781188	781220	.	+	.	ID=id1333;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ftsA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	781692	782246	.	+	.	ID=id1334;Note=Pfam match to entry PF02491 FtsA%2C Cell division protein FtsA%2C score 236.8%2C E-value 2e-68;gbkey=misc_feature;gene=ftsA;inference=protein motif:PFAM:PF02491
AM286415.1	EMBL	gene	782427	783578	.	+	.	ID=gene677;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;gene_synonym=sfiB,sulB;locus_tag=YE0677
AM286415.1	EMBL	CDS	782427	783578	.	+	0	ID=cds641;Parent=gene677;Dbxref=EnsemblGenomes-Gn:YE0677,EnsemblGenomes-Tr:CAL10786,GOA:A1JJJ8,InterPro:IPR000158,InterPro:IPR003008,InterPro:IPR008280,InterPro:IPR018316,InterPro:IPR020805,InterPro:IPR024757,UniProtKB/TrEMBL:A1JJJ8,NCBI_GP:CAL10786.1;Name=CAL10786.1;gbkey=CDS;gene=ftsZ;product=cell division protein FtsZ;protein_id=CAL10786.1;transl_table=11
AM286415.1	EMBL	sequence_feature	782457	783038	.	+	.	ID=id1335;Note=Pfam match to entry PF00091 tubulin%2C Tubulin/FtsZ family%2C GTPase domain%2C score 308.5%2C E-value 5.2e-90;gbkey=misc_feature;gene=ftsZ;inference=protein motif:PFAM:PF00091
AM286415.1	EMBL	sequence_feature	782553	782657	.	+	.	ID=id1336;Note=PS01134 FtsZ protein signature 1.;gbkey=misc_feature;gene=ftsZ;inference=protein motif:Prosite:PS01134
AM286415.1	EMBL	sequence_feature	782712	782777	.	+	.	ID=id1337;Note=PS01135 FtsZ protein signature 2.;gbkey=misc_feature;gene=ftsZ;inference=protein motif:Prosite:PS01135
AM286415.1	EMBL	sequence_feature	783042	783422	.	+	.	ID=id1338;Note=Pfam match to entry PF03953 tubulin_C%2C Tubulin/FtsZ family%2C C-terminal domain%2C score 155.8%2C E-value 4.7e-44;gbkey=misc_feature;gene=ftsZ;inference=protein motif:PFAM:PF03953
AM286415.1	EMBL	sequence_feature	783087	783119	.	+	.	ID=id1339;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ftsZ;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	783664	784599	.	+	.	ID=gene678;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;gene_synonym=asmB,envA;locus_tag=YE0678
AM286415.1	EMBL	CDS	783664	784599	.	+	0	ID=cds642;Parent=gene678;Dbxref=EnsemblGenomes-Gn:YE0678,EnsemblGenomes-Tr:CAL10787,GOA:A1JJJ9,InterPro:IPR004463,InterPro:IPR011334,InterPro:IPR015870,InterPro:IPR020568,PDB:3NZK,UniProtKB/TrEMBL:A1JJJ9,NCBI_GP:CAL10787.1;Name=CAL10787.1;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=CAL10787.1;transl_table=11
AM286415.1	EMBL	sequence_feature	783682	784518	.	+	.	ID=id1340;Note=Pfam match to entry PF03331 LpxC%2C UDP-3-O-acyl N-acetylglycosamine deacetylase%2C score 643.8%2C E-value 6.1e-191;gbkey=misc_feature;gene=lpxC;inference=protein motif:PFAM:PF03331
AM286415.1	EMBL	gene	784809	785339	.	-	.	ID=gene679;Name=YE0679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0679
AM286415.1	EMBL	CDS	784809	785339	.	-	0	ID=cds643;Parent=gene679;Dbxref=EnsemblGenomes-Gn:YE0679,EnsemblGenomes-Tr:CAL10788,InterPro:IPR007922,UniProtKB/TrEMBL:A1JJK0,NCBI_GP:CAL10788.1;Name=CAL10788.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10788.1;transl_table=11
AM286415.1	EMBL	gene	785362	785895	.	+	.	ID=gene680;Name=YE0680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0680
AM286415.1	EMBL	CDS	785362	785895	.	+	0	ID=cds644;Parent=gene680;Dbxref=EnsemblGenomes-Gn:YE0680,EnsemblGenomes-Tr:CAL10789,GOA:A1JJK1,InterPro:IPR009502,NCBI_GP:CAL10789.1;Name=CAL10789.1;gbkey=CDS;product=putative exported protein;protein_id=CAL10789.1;transl_table=11
AM286415.1	EMBL	gene	785973	788687	.	+	.	ID=gene681;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,pea,prlD;locus_tag=YE0681
AM286415.1	EMBL	CDS	785973	788687	.	+	0	ID=cds645;Parent=gene681;Dbxref=EnsemblGenomes-Gn:YE0681,EnsemblGenomes-Tr:CAL10790,GOA:A1JJK2,InterPro:IPR000185,InterPro:IPR004027,InterPro:IPR011115,InterPro:IPR011116,InterPro:IPR011130,InterPro:IPR014018,InterPro:IPR020937,InterPro:IPR027417,NCBI_GP:CAL10790.1;Name=CAL10790.1;gbkey=CDS;gene=secA;product=preprotein translocase SecA;protein_id=CAL10790.1;transl_table=11
AM286415.1	EMBL	sequence_feature	785988	787286	.	+	.	ID=id1341;Note=Pfam match to entry PF01043 SecA_protein%2C SecA protein%2C amino terminal region%2C score 1100.4%2C E-value 0;gbkey=misc_feature;gene=secA;inference=protein motif:PFAM:PF01043
AM286415.1	EMBL	sequence_feature	787470	787517	.	+	.	ID=id1342;Note=PS01312 Protein secA signatures.;gbkey=misc_feature;gene=secA;inference=protein motif:Prosite:PS01312
AM286415.1	EMBL	sequence_feature	788622	788684	.	+	.	ID=id1343;Note=Pfam match to entry PF02810 SEC-C%2C SEC-C motif %2Cscore 46.5%2C E-value 3.9e-11;gbkey=misc_feature;gene=secA;inference=protein motif:PFAM:PF02810
AM286415.1	EMBL	gene	788821	789207	.	+	.	ID=gene682;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=YE0682
AM286415.1	EMBL	CDS	788821	789207	.	+	0	ID=cds646;Parent=gene682;Dbxref=EnsemblGenomes-Gn:YE0682,EnsemblGenomes-Tr:CAL10791,GOA:A1JJK3,InterPro:IPR000086,InterPro:IPR003561,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR020476,UniProtKB/TrEMBL:A1JJK3,NCBI_GP:CAL10791.1;Name=CAL10791.1;gbkey=CDS;gene=mutT;product=mutator protein MutT;protein_id=CAL10791.1;transl_table=11
AM286415.1	EMBL	sequence_feature	788830	789204	.	+	.	ID=id1344;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 104.8%2C E-value 1.1e-28;gbkey=misc_feature;gene=mutT;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	sequence_feature	788932	788991	.	+	.	ID=id1345;Note=PS00893 mutT domain signature.;gbkey=misc_feature;gene=mutT;inference=protein motif:Prosite:PS00893
AM286415.1	EMBL	gene	789279	789485	.	-	.	ID=gene683;Name=YE0683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0683
AM286415.1	EMBL	CDS	789279	789485	.	-	0	ID=cds647;Parent=gene683;Dbxref=EnsemblGenomes-Gn:YE0683,EnsemblGenomes-Tr:CAL10792,GOA:A1JJK4,InterPro:IPR005584,InterPro:IPR013088,NCBI_GP:CAL10792.1;Name=CAL10792.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10792.1;transl_table=11
AM286415.1	EMBL	sequence_feature	789291	789470	.	-	.	ID=id1346;Note=Pfam match to entry PF03884 DUF329%2C Domain of unknown function (DUF329)%2C score 121.6%2C E-value 9.4e-34;gbkey=misc_feature;inference=protein motif:PFAM:PF03884
AM286415.1	EMBL	gene	789530	790282	.	-	.	ID=gene684;Name=YE0684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0684
AM286415.1	EMBL	CDS	789530	790282	.	-	0	ID=cds648;Parent=gene684;Dbxref=EnsemblGenomes-Gn:YE0684,EnsemblGenomes-Tr:CAL10793,GOA:A1JJK6,InterPro:IPR009777,InterPro:IPR027462,NCBI_GP:CAL10793.1;Name=CAL10793.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10793.1;transl_table=11
AM286415.1	EMBL	gene	790279	790899	.	-	.	ID=gene685;Name=YE0685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0685
AM286415.1	EMBL	CDS	790279	790899	.	-	0	ID=cds649;Parent=gene685;Dbxref=EnsemblGenomes-Gn:YE0685,EnsemblGenomes-Tr:CAL10794,GOA:A1JJK7,InterPro:IPR001977,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJK7,NCBI_GP:CAL10794.1;Name=CAL10794.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10794.1;transl_table=11
AM286415.1	EMBL	sequence_feature	790360	790893	.	-	.	ID=id1347;Note=Pfam match to entry PF01121 CoaE%2C Dephospho-CoA kinase%2C score 341.7%2C E-value 5.1e-100;gbkey=misc_feature;inference=protein motif:PFAM:PF01121
AM286415.1	EMBL	sequence_feature	790624	790713	.	-	.	ID=id1348;Note=PS01294 Uncharacterized protein family UPF0038 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01294
AM286415.1	EMBL	sequence_feature	790852	790875	.	-	.	ID=id1349;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	791193	792236	.	+	.	ID=gene686;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=YE0686
AM286415.1	EMBL	CDS	791193	792236	.	+	0	ID=cds650;Parent=gene686;Dbxref=EnsemblGenomes-Gn:YE0686,EnsemblGenomes-Tr:CAL10795,GOA:A1JJK8,InterPro:IPR001093,InterPro:IPR005993,InterPro:IPR013785,InterPro:IPR015875,NCBI_GP:CAL10795.1;Name=CAL10795.1;gbkey=CDS;gene=guaC;product=GMP reductase;protein_id=CAL10795.1;transl_table=11
AM286415.1	EMBL	sequence_feature	791199	792230	.	+	.	ID=id1350;Note=Pfam match to entry PF00478 IMPDH%2C IMP dehydrogenase / GMP reductase%2C score 450.6%2C E-value 9e-133;gbkey=misc_feature;gene=guaC;inference=protein motif:PFAM:PF00478
AM286415.1	EMBL	sequence_feature	791718	791756	.	+	.	ID=id1351;Note=PS00487 IMP dehydrogenase / GMP reductase signature.;gbkey=misc_feature;gene=guaC;inference=protein motif:Prosite:PS00487
AM286415.1	EMBL	gene	792555	793754	.	-	.	ID=gene687;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;gene_synonym=hopC;locus_tag=YE0688
AM286415.1	EMBL	CDS	792555	793754	.	-	0	ID=cds651;Parent=gene687;Dbxref=EnsemblGenomes-Gn:YE0688,EnsemblGenomes-Tr:CAL10796,GOA:A1JJK9,InterPro:IPR001992,InterPro:IPR003004,InterPro:IPR018076,UniProtKB/TrEMBL:A1JJK9,NCBI_GP:CAL10796.1;Name=CAL10796.1;gbkey=CDS;gene=hofC;product=putative type II secretion system protein;protein_id=CAL10796.1;transl_table=11
AM286415.1	EMBL	sequence_feature	792573	793562	.	-	.	ID=id1352;Note=Pfam match to entry PF00482 GSPII_F%2C Bacterial type II secretion system protein F domain%2C score 364.8%2CE-value 5.7e-107;gbkey=misc_feature;gene=hofC;inference=protein motif:PFAM:PF00482
AM286415.1	EMBL	sequence_feature	793185	793253	.	-	.	ID=id1353;Note=3 probable transmembrane helices predicted for YE0688 by TMHMM2.0 at aa 168-190%2C 213-235 and 370-392;gbkey=misc_feature;gene=hofC;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	793050	793118	.	-	.	ID=id1353;Note=3 probable transmembrane helices predicted for YE0688 by TMHMM2.0 at aa 168-190%2C 213-235 and 370-392;gbkey=misc_feature;gene=hofC;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	792579	792647	.	-	.	ID=id1353;Note=3 probable transmembrane helices predicted for YE0688 by TMHMM2.0 at aa 168-190%2C 213-235 and 370-392;gbkey=misc_feature;gene=hofC;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	793194	793280	.	-	.	ID=id1354;Note=PS00874 Bacterial type II secretion system protein F signature.;gbkey=misc_feature;gene=hofC;inference=protein motif:Prosite:PS00874
AM286415.1	EMBL	gene	793751	795205	.	-	.	ID=gene688;Name=hofC;gbkey=Gene;gene=hofC;gene_biotype=protein_coding;locus_tag=YE0689
AM286415.1	EMBL	CDS	793751	795205	.	-	0	ID=cds652;Parent=gene688;Dbxref=EnsemblGenomes-Gn:YE0689,EnsemblGenomes-Tr:CAL10797,GOA:A1JJL0,InterPro:IPR001482,InterPro:IPR007831,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJL0,NCBI_GP:CAL10797.1;Name=CAL10797.1;Note=Similar to Yersinia pestis putative type II secretion system protein HofB or Ypo3426 SWALL:Q8ZBI4 (EMBL:AJ414157) (512 aa) fasta scores: E(): 2.8e-109%2C 71 id in 500 aa and to Escherichia coli protein transport protein HofB or b0107 SWALL:HOFB_ECOLI (SWALL:P36645) (461 aa) fasta scores: E(): 2.4e-70%2C 49.03 38d in 467 aa;gbkey=CDS;gene=hofC;inference=similar to sequence:UniProtKB:P36645;product=HofC protein;protein_id=CAL10797.1;transl_table=11
AM286415.1	EMBL	sequence_feature	793994	794026	.	-	.	ID=id1355;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hofC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	794075	794872	.	-	.	ID=id1356;Note=Pfam match to entry PF00437 GSPII_E%2C Type II/IV secretion system protein%2C score 489.6%2C E-value 1.6e-144;gbkey=misc_feature;gene=hofC;inference=protein motif:PFAM:PF00437
AM286415.1	EMBL	sequence_feature	794264	794308	.	-	.	ID=id1357;Note=PS00662 Bacterial type II secretion system protein E signature.;gbkey=misc_feature;gene=hofC;inference=protein motif:Prosite:PS00662
AM286415.1	EMBL	sequence_feature	794462	794485	.	-	.	ID=id1358;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=hofC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	795222	795656	.	-	.	ID=gene689;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=YE0690
AM286415.1	EMBL	CDS	795222	795656	.	-	0	ID=cds653;Parent=gene689;Dbxref=EnsemblGenomes-Gn:YE0690,EnsemblGenomes-Tr:CAL10798,GOA:A1JJL1,InterPro:IPR001082,InterPro:IPR012902,UniProtKB/TrEMBL:A1JJL1,NCBI_GP:CAL10798.1;Name=CAL10798.1;gbkey=CDS;gene=ppdD;product=putative prepilin peptidase dependent protein D precursor;protein_id=CAL10798.1;transl_table=11
AM286415.1	EMBL	sequence_feature	795249	795638	.	-	.	ID=id1359;Note=Pfam match to entry PF00114 pilin%2C Pilin (bacterial filament)%2C score 9.2%2C E-value 4.8e-07;gbkey=misc_feature;gene=ppdD;inference=protein motif:PFAM:PF00114
AM286415.1	EMBL	sequence_feature	795582	795644	.	-	.	ID=id1360;Note=PS00409 Prokaryotic N-terminal methylation site.;gbkey=misc_feature;gene=ppdD;inference=protein motif:Prosite:PS00409
AM286415.1	EMBL	gene	795861	796769	.	-	.	ID=gene690;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=YE0691
AM286415.1	EMBL	CDS	795861	796769	.	-	0	ID=cds654;Parent=gene690;Dbxref=EnsemblGenomes-Gn:YE0691,EnsemblGenomes-Tr:CAL10799,GOA:A1JJL2,InterPro:IPR002638,InterPro:IPR004393,InterPro:IPR013785,InterPro:IPR022412,InterPro:IPR027277,UniProtKB/TrEMBL:A1JJL2,NCBI_GP:CAL10799.1;Name=CAL10799.1;gbkey=CDS;gene=nadC;product=nicotinate-nucleotide pyrophosphorylase [carboxylating];protein_id=CAL10799.1;transl_table=11
AM286415.1	EMBL	sequence_feature	795870	796382	.	-	.	ID=id1361;Note=Pfam match to entry PF01729 QRPTase%2C Quinolinate phosphoribosyl transferase%2C C-terminal domain%2C score 304.8%2C E-value 6.9e-89;gbkey=misc_feature;gene=nadC;inference=protein motif:PFAM:PF01729
AM286415.1	EMBL	sequence_feature	796386	796652	.	-	.	ID=id1362;Note=Pfam match to entry PF02749 QRPTase_N%2C Quinolinate phosphoribosyl transferase%2C N-terminal domain%2C score 121.3%2C E-value 1.2e-33;gbkey=misc_feature;gene=nadC;inference=protein motif:PFAM:PF02749
AM286415.1	EMBL	gene	796999	797463	.	+	.	ID=gene691;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=YE0692
AM286415.1	EMBL	CDS	796999	797463	.	+	0	ID=cds655;Parent=gene691;Dbxref=EnsemblGenomes-Gn:YE0692,EnsemblGenomes-Tr:CAL10800,GOA:A1JJL3,InterPro:IPR002502,UniProtKB/TrEMBL:A1JJL3,NCBI_GP:CAL10800.1;Name=CAL10800.1;gbkey=CDS;gene=ampD;product=putative signalling protein in beta-lactamase regulation;protein_id=CAL10800.1;transl_table=11
AM286415.1	EMBL	sequence_feature	797017	797424	.	+	.	ID=id1363;Note=Pfam match to entry PF01510 Amidase_2%2CN-acetylmuramoyl-L-alanine amidase%2C score 179.4%2C E-value 3.8e-51;gbkey=misc_feature;gene=ampD;inference=protein motif:PFAM:PF01510
AM286415.1	EMBL	gene	797608	798462	.	+	.	ID=gene692;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=YE0693
AM286415.1	EMBL	CDS	797608	798462	.	+	0	ID=cds656;Parent=gene692;Dbxref=EnsemblGenomes-Gn:YE0693,EnsemblGenomes-Tr:CAL10801,GOA:A1JJL4,InterPro:IPR011527,UniProtKB/TrEMBL:A1JJL4,NCBI_GP:CAL10801.1;Name=CAL10801.1;gbkey=CDS;gene=ampE;product=putative membrane-bound sensory transducer in beta-lactamase regulation;protein_id=CAL10801.1;transl_table=11
AM286415.1	EMBL	sequence_feature	797719	797787	.	+	.	ID=id1364;Note=4 probable transmembrane helices predicted for YE0693 by TMHMM2.0 at aa 38-60%2C 65-87%2C 146-168 and 261-283;gbkey=misc_feature;gene=ampE;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	797800	797868	.	+	.	ID=id1364;Note=4 probable transmembrane helices predicted for YE0693 by TMHMM2.0 at aa 38-60%2C 65-87%2C 146-168 and 261-283;gbkey=misc_feature;gene=ampE;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	798043	798111	.	+	.	ID=id1364;Note=4 probable transmembrane helices predicted for YE0693 by TMHMM2.0 at aa 38-60%2C 65-87%2C 146-168 and 261-283;gbkey=misc_feature;gene=ampE;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	798388	798456	.	+	.	ID=id1364;Note=4 probable transmembrane helices predicted for YE0693 by TMHMM2.0 at aa 38-60%2C 65-87%2C 146-168 and 261-283;gbkey=misc_feature;gene=ampE;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	798922	806376	.	+	.	ID=gene693;Name=YE0694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0694
AM286415.1	EMBL	CDS	798922	806376	.	+	0	ID=cds657;Parent=gene693;Dbxref=EnsemblGenomes-Gn:YE0694,EnsemblGenomes-Tr:CAL10802,InterPro:IPR003343,InterPro:IPR003344,InterPro:IPR008964,InterPro:IPR018392,InterPro:IPR024519,UniProtKB/TrEMBL:A1JJL5,NCBI_GP:CAL10802.1;Name=CAL10802.1;Note=Similar to many adhesins including: Escherichia coli O127:H6 intimin Eae or EaeA SWALL:EAE_ECO27 (SWALL:P19809) (939 aa) fasta scores: E(): 1.3e-57%2C 34.3 id in 720 aa and Yersinia pestis putative invasin Ypo3944 SWALL:Q8ZA73 (EMBL:AJ414159) (3013 aa) fasta scores: E(): 2.8e-74%2C 28.71 38d in 2173 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P19809;product=putative adhesin;protein_id=CAL10802.1;transl_table=11
AM286415.1	EMBL	sequence_feature	798979	799047	.	+	.	ID=id1365;Note=1 probable transmembrane helix predicted for YE0694 by TMHMM2.0 at aa 20-42;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	799102	799248	.	+	.	ID=id1366;Note=Pfam match to entry PF01476 LysM%2C LysM domain %2Cscore 25.3%2C E-value 9e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01476
AM286415.1	EMBL	sequence_feature	801112	801384	.	+	.	ID=id1367;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 21.7%2C E-value 7.3e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	801385	801696	.	+	.	ID=id1368;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 26.2%2C E-value 2.9e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	801721	802023	.	+	.	ID=id1369;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 57.5%2C E-value 1.9e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	802036	802320	.	+	.	ID=id1370;Note=Pfam match to entry PF02368 Big_2%2C Bacterial Ig-like domain (group 2)%2C score 6.1%2C E-value 0.1;gbkey=misc_feature;inference=protein motif:PFAM:PF02368
AM286415.1	EMBL	sequence_feature	802042	802329	.	+	.	ID=id1371;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 34.6%2C E-value 1.5e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	802666	802947	.	+	.	ID=id1372;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 34.7%2C E-value 1.4e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	802966	803244	.	+	.	ID=id1373;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 47.2%2C E-value 2.4e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	803554	803856	.	+	.	ID=id1374;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 38.0%2C E-value 1.4e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	803866	804162	.	+	.	ID=id1375;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 15.0%2C E-value 0.00027;gbkey=misc_feature;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	804163	804456	.	+	.	ID=id1376;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 42.1%2C E-value 8e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	804340	804363	.	+	.	ID=id1377;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	804466	804768	.	+	.	ID=id1378;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 16.2%2C E-value 0.00021;gbkey=misc_feature;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	804778	805011	.	+	.	ID=id1379;Note=Pfam match to entry PF02368 Big_2%2C Bacterial Ig-like domain (group 2)%2C score 16.4%2C E-value 0.014;gbkey=misc_feature;inference=protein motif:PFAM:PF02368
AM286415.1	EMBL	sequence_feature	805018	805290	.	+	.	ID=id1380;Note=Pfam match to entry PF02368 Big_2%2C Bacterial Ig-like domain (group 2)%2C score 7.2%2C E-value 0.082;gbkey=misc_feature;inference=protein motif:PFAM:PF02368
AM286415.1	EMBL	gene	806465	807838	.	-	.	ID=gene694;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=YE0695
AM286415.1	EMBL	CDS	806465	807838	.	-	0	ID=cds658;Parent=gene694;Dbxref=EnsemblGenomes-Gn:YE0695,EnsemblGenomes-Tr:CAL10803,GOA:A1JJL6,InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB/TrEMBL:A1JJL6,NCBI_GP:CAL10803.1;Name=CAL10803.1;gbkey=CDS;gene=aroP;product=aromatic amino acid transport protein;protein_id=CAL10803.1;transl_table=11
AM286415.1	EMBL	sequence_feature	806495	807811	.	-	.	ID=id1381;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 671.5%2C E-value 2.8e-199;gbkey=misc_feature;gene=aroP;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	807719	807778	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	807656	807709	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	807479	807547	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	807401	807469	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	807314	807382	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	807179	807247	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	807053	807121	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	806927	806995	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	806780	806848	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	806702	806770	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	806576	806644	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	806504	806566	.	-	.	ID=id1382;Note=12 probable transmembrane helices predicted for YE0695 by TMHMM2.0 at aa 21-40%2C 44-61%2C 98-120%2C 124-146%2C153-175%2C 198-220%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-445;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	807620	807712	.	-	.	ID=id1383;Note=PS00218 Amino acid permeases signature.;gbkey=misc_feature;gene=aroP;inference=protein motif:Prosite:PS00218
AM286415.1	EMBL	gene	808535	809299	.	+	.	ID=gene695;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;gene_synonym=aceC,genA;locus_tag=YE0698
AM286415.1	EMBL	CDS	808535	809299	.	+	0	ID=cds659;Parent=gene695;Dbxref=EnsemblGenomes-Gn:YE0698,EnsemblGenomes-Tr:CAL10804,GOA:A1JJL7,InterPro:IPR000524,InterPro:IPR008920,InterPro:IPR011711,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJL7,NCBI_GP:CAL10804.1;Name=CAL10804.1;gbkey=CDS;gene=pdhR;product=pyruvate dehydrogenase complex repressor;protein_id=CAL10804.1;transl_table=11
AM286415.1	EMBL	sequence_feature	808577	808756	.	+	.	ID=id1384;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 107.3%2C E-value 2e-29;gbkey=misc_feature;gene=pdhR;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	sequence_feature	808634	808708	.	+	.	ID=id1385;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=misc_feature;gene=pdhR;inference=protein motif:Prosite:PS00043
AM286415.1	EMBL	sequence_feature	808637	808702	.	+	.	ID=id1386;Note=Predicted helix-turn-helix motif with score 1517.000%2C SD 4.35 at aa 35-56%2C sequence LPERELAKQFDVSRPSLREAIQ;gbkey=misc_feature;gene=pdhR
AM286415.1	EMBL	gene	809476	812139	.	+	.	ID=gene696;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=YE0699
AM286415.1	EMBL	CDS	809476	812139	.	+	0	ID=cds660;Parent=gene696;Dbxref=EnsemblGenomes-Gn:YE0699,EnsemblGenomes-Tr:CAL10805,GOA:A1JJL8,InterPro:IPR004660,InterPro:IPR005474,InterPro:IPR009014,InterPro:IPR029061,UniProtKB/TrEMBL:A1JJL8,NCBI_GP:CAL10805.1;Name=CAL10805.1;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase E1 component;protein_id=CAL10805.1;transl_table=11
AM286415.1	EMBL	sequence_feature	809707	810906	.	+	.	ID=id1387;Note=Pfam match to entry PF00456 transketolase%2CTransketolase%2C thiamine diphosphate binding domain%2C score -146.8%2C E-value 1.2e-06;gbkey=misc_feature;gene=aceE;inference=protein motif:PFAM:PF00456
AM286415.1	EMBL	gene	812153	814030	.	+	.	ID=gene697;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=YE0701
AM286415.1	EMBL	CDS	812153	814030	.	+	0	ID=cds661;Parent=gene697;Dbxref=EnsemblGenomes-Gn:YE0701,EnsemblGenomes-Tr:CAL10806,GOA:A1JJL9,InterPro:IPR000089,InterPro:IPR001078,InterPro:IPR003016,InterPro:IPR004167,InterPro:IPR006256,InterPro:IPR011053,InterPro:IPR023213,UniProtKB/TrEMBL:A1JJL9,NCBI_GP:CAL10806.1;Name=CAL10806.1;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex;protein_id=CAL10806.1;transl_table=11
AM286415.1	EMBL	sequence_feature	812159	812374	.	+	.	ID=id1388;Note=Pfam match to entry PF00364 biotin_lipoyl%2CBiotin-requiring enzyme%2C score 102.1%2C E-value 7e-28;gbkey=misc_feature;gene=aceF;inference=protein motif:PFAM:PF00364
AM286415.1	EMBL	sequence_feature	812213	812374	.	+	.	ID=id1389;Note=Pfam match to entry PF00364 biotin_lipoyl%2CBiotin-requiring enzyme%2C score 57.2%2C E-value 2.4e-14;gbkey=misc_feature;gene=aceF;inference=protein motif:PFAM:PF00364
AM286415.1	EMBL	sequence_feature	812225	812314	.	+	.	ID=id1390;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.;gbkey=misc_feature;gene=aceF;inference=protein motif:Prosite:PS00189
AM286415.1	EMBL	sequence_feature	812465	812680	.	+	.	ID=id1391;Note=Pfam match to entry PF00364 biotin_lipoyl%2CBiotin-requiring enzyme%2C score 102.1%2C E-value 6.9e-28;gbkey=misc_feature;gene=aceF;inference=protein motif:PFAM:PF00364
AM286415.1	EMBL	sequence_feature	812531	812620	.	+	.	ID=id1392;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.;gbkey=misc_feature;gene=aceF;inference=protein motif:Prosite:PS00189
AM286415.1	EMBL	sequence_feature	812762	812977	.	+	.	ID=id1393;Note=Pfam match to entry PF00364 biotin_lipoyl%2CBiotin-requiring enzyme%2C score 98.7%2C E-value 7.4e-27;gbkey=misc_feature;gene=aceF;inference=protein motif:PFAM:PF00364
AM286415.1	EMBL	sequence_feature	812828	812917	.	+	.	ID=id1394;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.;gbkey=misc_feature;gene=aceF;inference=protein motif:Prosite:PS00189
AM286415.1	EMBL	sequence_feature	813113	813229	.	+	.	ID=id1395;Note=Pfam match to entry PF02817 e3_binding%2C e3 binding domain%2C score 74.2%2C E-value 1.7e-19;gbkey=misc_feature;gene=aceF;inference=protein motif:PFAM:PF02817
AM286415.1	EMBL	sequence_feature	813326	814027	.	+	.	ID=id1396;Note=Pfam match to entry PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain) %2Cscore 367.1%2C E-value 1.2e-107;gbkey=misc_feature;gene=aceF;inference=protein motif:PFAM:PF00198
AM286415.1	EMBL	gene	814406	815833	.	+	.	ID=gene698;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;gene_synonym=lpd;locus_tag=YE0702
AM286415.1	EMBL	CDS	814406	815833	.	+	0	ID=cds662;Parent=gene698;Dbxref=EnsemblGenomes-Gn:YE0702,EnsemblGenomes-Tr:CAL10807,GOA:A1JJM0,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR006258,InterPro:IPR012999,InterPro:IPR013027,InterPro:IPR016156,InterPro:IPR023753,UniProtKB/TrEMBL:A1JJM0,NCBI_GP:CAL10807.1;Name=CAL10807.1;gbkey=CDS;gene=lpdA;product=dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex;protein_id=CAL10807.1;transl_table=11
AM286415.1	EMBL	sequence_feature	814430	815377	.	+	.	ID=id1397;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 327.5%2CE-value 9.8e-96;gbkey=misc_feature;gene=lpdA;inference=protein motif:PFAM:PF00070
AM286415.1	EMBL	sequence_feature	814532	814564	.	+	.	ID=id1398;Note=PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.;gbkey=misc_feature;gene=lpdA;inference=protein motif:Prosite:PS00076
AM286415.1	EMBL	sequence_feature	815447	815776	.	+	.	ID=id1399;Note=Pfam match to entry PF02852 pyr_redox_dim%2C Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%2C score 185.4%2C E-value 6e-53;gbkey=misc_feature;gene=lpdA;inference=protein motif:PFAM:PF02852
AM286415.1	EMBL	gene	816140	817153	.	-	.	ID=gene699;Name=YE0703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0703
AM286415.1	EMBL	CDS	816140	817153	.	-	0	ID=cds663;Parent=gene699;Dbxref=EnsemblGenomes-Gn:YE0703,EnsemblGenomes-Tr:CAL10808,GOA:A1JJM1,InterPro:IPR009057,InterPro:IPR018060,UniProtKB/TrEMBL:A1JJM1,NCBI_GP:CAL10808.1;Name=CAL10808.1;Note=Similar to several AraC-family transcriptional regulators: Salmonella typhi Sty0395 SWALL:Q8Z909 (EMBL:AL627266) (334 aa) fasta scores: E(): 4.3e-16%2C 28 id in 325 aa and Brucella melitensis Bmeii0104 SWALL:Q8YDS1 (EMBL:AE009648) (233 aa) fasta scores: E(): 2.2e-14%2C 29.85 38d in 201 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627266;product=AraC-family transcriptional regulator;protein_id=CAL10808.1;transl_table=11
AM286415.1	EMBL	sequence_feature	816161	816292	.	-	.	ID=id1400;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 30.9%2C E-value 1.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	816311	816448	.	-	.	ID=id1401;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 39.6%2C E-value 4.5e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	816347	816412	.	-	.	ID=id1402;Note=Predicted helix-turn-helix motif with score 2251.000%2C SD 6.85 at aa 248-269%2C sequence LSMGELARLVNMSQSTLQRRFR;gbkey=misc_feature
AM286415.1	EMBL	gene	817425	819674	.	+	.	ID=gene700;Name=YE0704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0704
AM286415.1	EMBL	CDS	817425	819674	.	+	0	ID=cds664;Parent=gene700;Dbxref=EnsemblGenomes-Gn:YE0704,EnsemblGenomes-Tr:CAL10809,GOA:A1JJM2,InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR010917,InterPro:IPR012910,UniProtKB/TrEMBL:A1JJM2,NCBI_GP:CAL10809.1;Name=CAL10809.1;Note=Similar to many siderophores including: Pseudomonas aeruginosa ferric enterobactin receptor precursor PfeA or Pa2688 SWALL:PFEA_PSEAE (SWALL:Q05098) (746 aa) fasta scores: E(): 1.7e-198%2C 68.07 38d in 708 aa and Escherichia coli ferrienterobactin receptor precursor FepA or fep or FeuB or b0584 SWALL:FEPA_ECOLI (SWALL:P05825) (746 aa) fasta scores: E(): 1.4e-194%2C 65.88 38d in 727 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q05098;product=putative siderophore;protein_id=CAL10809.1;transl_table=11
AM286415.1	EMBL	sequence_feature	817425	817574	.	+	.	ID=id1403;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	sequence_feature	819306	819671	.	+	.	ID=id1404;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 107.9%2CE-value 1.3e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	sequence_feature	819618	819671	.	+	.	ID=id1405;Note=PS01156 TonB-dependent receptor proteins signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01156
AM286415.1	EMBL	gene	820247	822844	.	+	.	ID=gene701;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=YE0705
AM286415.1	EMBL	CDS	820247	822844	.	+	0	ID=cds665;Parent=gene701;Dbxref=EnsemblGenomes-Gn:YE0705,EnsemblGenomes-Tr:CAL10810,GOA:A1JJM3,InterPro:IPR001030,InterPro:IPR004406,InterPro:IPR015928,InterPro:IPR015929,InterPro:IPR015931,InterPro:IPR015932,InterPro:IPR015933,InterPro:IPR015937,InterPro:IPR018136,UniProtKB/TrEMBL:A1JJM3,NCBI_GP:CAL10810.1;Name=CAL10810.1;gbkey=CDS;gene=acnB;product=aconitate hydratase 2;protein_id=CAL10810.1;transl_table=11
AM286415.1	EMBL	sequence_feature	821393	822700	.	+	.	ID=id1406;Note=Pfam match to entry PF00330 aconitase%2C Aconitase family (aconitate hydratase)%2C score -92.7%2C E-value 1.1e-08;gbkey=misc_feature;gene=acnB;inference=protein motif:PFAM:PF00330
AM286415.1	EMBL	sequence_feature	822350	822403	.	+	.	ID=id1407;Note=PS00450 Aconitase family signature 1.;gbkey=misc_feature;gene=acnB;inference=protein motif:Prosite:PS00450
AM286415.1	EMBL	sequence_feature	822527	822568	.	+	.	ID=id1408;Note=PS01244 Aconitase family signature 2.;gbkey=misc_feature;gene=acnB;inference=protein motif:Prosite:PS01244
AM286415.1	EMBL	gene	823034	823396	.	+	.	ID=gene702;Name=YE0706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0706
AM286415.1	EMBL	CDS	823034	823396	.	+	0	ID=cds666;Parent=gene702;Dbxref=EnsemblGenomes-Gn:YE0706,EnsemblGenomes-Tr:CAL10811,InterPro:IPR008249,NCBI_GP:CAL10811.1;Name=CAL10811.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10811.1;transl_table=11
AM286415.1	EMBL	gene	823440	824327	.	-	.	ID=gene703;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=YE0707
AM286415.1	EMBL	CDS	823440	824327	.	-	0	ID=cds667;Parent=gene703;Dbxref=EnsemblGenomes-Gn:YE0707,EnsemblGenomes-Tr:CAL10812,GOA:A1JJM5,InterPro:IPR000620,UniProtKB/TrEMBL:A1JJM5,NCBI_GP:CAL10812.1;Name=CAL10812.1;gbkey=CDS;gene=yddG;product=putative membrane protein;protein_id=CAL10812.1;transl_table=11
AM286415.1	EMBL	sequence_feature	824256	824309	.	-	.	ID=id1409;Note=10 probable transmembrane helices predicted for YE0707 by TMHMM2.0 at aa 7-24%2C 29-51%2C 63-85%2C 90-112%2C119-141%2C 156-175%2C 182-204%2C 214-236%2C 243-265 and 269-288;gbkey=misc_feature;gene=yddG;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	824175	824243	.	-	.	ID=id1409;Note=10 probable transmembrane helices predicted for YE0707 by TMHMM2.0 at aa 7-24%2C 29-51%2C 63-85%2C 90-112%2C119-141%2C 156-175%2C 182-204%2C 214-236%2C 243-265 and 269-288;gbkey=misc_feature;gene=yddG;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	824073	824141	.	-	.	ID=id1409;Note=10 probable transmembrane helices predicted for YE0707 by TMHMM2.0 at aa 7-24%2C 29-51%2C 63-85%2C 90-112%2C119-141%2C 156-175%2C 182-204%2C 214-236%2C 243-265 and 269-288;gbkey=misc_feature;gene=yddG;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	823992	824060	.	-	.	ID=id1409;Note=10 probable transmembrane helices predicted for YE0707 by TMHMM2.0 at aa 7-24%2C 29-51%2C 63-85%2C 90-112%2C119-141%2C 156-175%2C 182-204%2C 214-236%2C 243-265 and 269-288;gbkey=misc_feature;gene=yddG;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	823905	823973	.	-	.	ID=id1409;Note=10 probable transmembrane helices predicted for YE0707 by TMHMM2.0 at aa 7-24%2C 29-51%2C 63-85%2C 90-112%2C119-141%2C 156-175%2C 182-204%2C 214-236%2C 243-265 and 269-288;gbkey=misc_feature;gene=yddG;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	823803	823862	.	-	.	ID=id1409;Note=10 probable transmembrane helices predicted for YE0707 by TMHMM2.0 at aa 7-24%2C 29-51%2C 63-85%2C 90-112%2C119-141%2C 156-175%2C 182-204%2C 214-236%2C 243-265 and 269-288;gbkey=misc_feature;gene=yddG;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	823716	823784	.	-	.	ID=id1409;Note=10 probable transmembrane helices predicted for YE0707 by TMHMM2.0 at aa 7-24%2C 29-51%2C 63-85%2C 90-112%2C119-141%2C 156-175%2C 182-204%2C 214-236%2C 243-265 and 269-288;gbkey=misc_feature;gene=yddG;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	823620	823688	.	-	.	ID=id1409;Note=10 probable transmembrane helices predicted for YE0707 by TMHMM2.0 at aa 7-24%2C 29-51%2C 63-85%2C 90-112%2C119-141%2C 156-175%2C 182-204%2C 214-236%2C 243-265 and 269-288;gbkey=misc_feature;gene=yddG;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	823533	823601	.	-	.	ID=id1409;Note=10 probable transmembrane helices predicted for YE0707 by TMHMM2.0 at aa 7-24%2C 29-51%2C 63-85%2C 90-112%2C119-141%2C 156-175%2C 182-204%2C 214-236%2C 243-265 and 269-288;gbkey=misc_feature;gene=yddG;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	823464	823523	.	-	.	ID=id1409;Note=10 probable transmembrane helices predicted for YE0707 by TMHMM2.0 at aa 7-24%2C 29-51%2C 63-85%2C 90-112%2C119-141%2C 156-175%2C 182-204%2C 214-236%2C 243-265 and 269-288;gbkey=misc_feature;gene=yddG;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	823467	823832	.	-	.	ID=id1410;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 43.9%2C E-value 2.4e-10;gbkey=misc_feature;gene=yddG;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	823752	823784	.	-	.	ID=id1411;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yddG;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	823917	824288	.	-	.	ID=id1412;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 13.7%2C E-value 0.011;gbkey=misc_feature;gene=yddG;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	824685	825149	.	+	.	ID=gene704;Name=YE0708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0708
AM286415.1	EMBL	CDS	824685	825149	.	+	0	ID=cds668;Parent=gene704;Dbxref=EnsemblGenomes-Gn:YE0708,EnsemblGenomes-Tr:CAL10813,InterPro:IPR011050,InterPro:IPR012334,UniProtKB/TrEMBL:A1JJM6,NCBI_GP:CAL10813.1;Name=CAL10813.1;Note=Weakly similar in parts to several hemagglutinin-related proteins: Ralstonia solanacearum Rsc0887 or Rs06116 SWALL:Q8Y106 (EMBL:AL646061) (3501 aa) fasta scores: E(): 0.00012%2C 32.11 38d in 109 aa and Neisseria meningitidis hemagglutinin/hemolysin-related protein Nmb1779 SWALL:Q9JY23 (EMBL:AE002527) (1995 aa) fasta scores: E(): 0.00032%2C 35.92 38d in 103 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646061;product=hypothetical protein;protein_id=CAL10813.1;transl_table=11
AM286415.1	EMBL	gene	825271	826065	.	-	.	ID=gene705;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=YE0709
AM286415.1	EMBL	CDS	825271	826065	.	-	0	ID=cds669;Parent=gene705;Dbxref=EnsemblGenomes-Gn:YE0709,EnsemblGenomes-Tr:CAL10814,GOA:A1JJM7,InterPro:IPR003826,InterPro:IPR009165,InterPro:IPR016067,NCBI_GP:CAL10814.1;Name=CAL10814.1;gbkey=CDS;gene=speD;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=CAL10814.1;transl_table=11
AM286415.1	EMBL	gene	826090	826953	.	-	.	ID=gene706;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=YE0710
AM286415.1	EMBL	CDS	826090	826953	.	-	0	ID=cds670;Parent=gene706;Dbxref=EnsemblGenomes-Gn:YE0710,EnsemblGenomes-Tr:CAL10815,GOA:A1JJM8,InterPro:IPR001045,InterPro:IPR029063,NCBI_GP:CAL10815.1;Name=CAL10815.1;gbkey=CDS;gene=speE;product=spermidine synthase;protein_id=CAL10815.1;transl_table=11
AM286415.1	EMBL	sequence_feature	826231	826938	.	-	.	ID=id1413;Note=Pfam match to entry PF01564 Spermine_synth%2CSpermine/spermidine synthase%2C score 422.2%2C E-value 3.1e-124;gbkey=misc_feature;gene=speE;inference=protein motif:PFAM:PF01564
AM286415.1	EMBL	sequence_feature	826672	826713	.	-	.	ID=id1414;Note=PS01330 Spermidine/spermine synthases family signature.;gbkey=misc_feature;gene=speE;inference=protein motif:Prosite:PS01330
AM286415.1	EMBL	gene	827068	827415	.	-	.	ID=gene707;Name=yacC;gbkey=Gene;gene=yacC;gene_biotype=protein_coding;locus_tag=YE0711
AM286415.1	EMBL	CDS	827068	827415	.	-	0	ID=cds671;Parent=gene707;Dbxref=EnsemblGenomes-Gn:YE0711,EnsemblGenomes-Tr:CAL10816,InterPro:IPR019114,UniProtKB/TrEMBL:A1JJM9,NCBI_GP:CAL10816.1;Name=CAL10816.1;gbkey=CDS;gene=yacC;product=putative exported protein;protein_id=CAL10816.1;transl_table=11
AM286415.1	EMBL	gene	827646	829247	.	+	.	ID=gene708;Name=yacK;gbkey=Gene;gene=yacK;gene_biotype=protein_coding;locus_tag=YE0712
AM286415.1	EMBL	CDS	827646	829247	.	+	0	ID=cds672;Parent=gene708;Dbxref=EnsemblGenomes-Gn:YE0712,EnsemblGenomes-Tr:CAL10817,GOA:A1JJN0,InterPro:IPR001117,InterPro:IPR002355,InterPro:IPR006311,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,UniProtKB/TrEMBL:A1JJN0,NCBI_GP:CAL10817.1;Name=CAL10817.1;gbkey=CDS;gene=yacK;product=putative exported protein;protein_id=CAL10817.1;transl_table=11
AM286415.1	EMBL	sequence_feature	828165	828620	.	+	.	ID=id1415;Note=Pfam match to entry PF00394 Cu-oxidase%2C Multicopper oxidase%2C score 1.8%2C E-value 0.0051;gbkey=misc_feature;gene=yacK;inference=protein motif:PFAM:PF00394
AM286415.1	EMBL	sequence_feature	829185	829220	.	+	.	ID=id1416;Note=PS00080 Multicopper oxidases signature 2.;gbkey=misc_feature;gene=yacK;inference=protein motif:Prosite:PS00080
AM286415.1	EMBL	gene	829362	829898	.	+	.	ID=gene709;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;gene_synonym=b0125;locus_tag=YE0713
AM286415.1	EMBL	CDS	829362	829898	.	+	0	ID=cds673;Parent=gene709;Dbxref=EnsemblGenomes-Gn:YE0713,EnsemblGenomes-Tr:CAL10818,GOA:A1JJN1,InterPro:IPR000836,InterPro:IPR005904,InterPro:IPR029057,UniProtKB/TrEMBL:A1JJN1,NCBI_GP:CAL10818.1;Name=CAL10818.1;gbkey=CDS;gene=hpt;product=hypoxanthine phosphoribosyltransferase;protein_id=CAL10818.1;transl_table=11
AM286415.1	EMBL	sequence_feature	829362	829826	.	+	.	ID=id1417;Note=Pfam match to entry PF00156 Pribosyltran%2CPhosphoribosyl transferase domain%2C score 117.3%2C E-value 1.8e-32;gbkey=misc_feature;gene=hpt;inference=protein motif:PFAM:PF00156
AM286415.1	EMBL	sequence_feature	829644	829682	.	+	.	ID=id1418;Note=PS00103 Purine/pyrimidine phosphoribosyl transferases signature.;gbkey=misc_feature;gene=hpt;inference=protein motif:Prosite:PS00103
AM286415.1	EMBL	gene	830007	830669	.	-	.	ID=gene710;Name=yadF;gbkey=Gene;gene=yadF;gene_biotype=protein_coding;locus_tag=YE0714
AM286415.1	EMBL	CDS	830007	830669	.	-	0	ID=cds674;Parent=gene710;Dbxref=EnsemblGenomes-Gn:YE0714,EnsemblGenomes-Tr:CAL10819,GOA:A1JJN2,InterPro:IPR001765,InterPro:IPR015892,UniProtKB/TrEMBL:A1JJN2,NCBI_GP:CAL10819.1;Name=CAL10819.1;gbkey=CDS;gene=yadF;product=putative carbonic anhydrase;protein_id=CAL10819.1;transl_table=11
AM286415.1	EMBL	sequence_feature	830109	830630	.	-	.	ID=id1419;Note=Pfam match to entry PF00484 Pro_CA%2C Carbonic anhydrase%2C score 270.0%2C E-value 2e-78;gbkey=misc_feature;gene=yadF;inference=protein motif:PFAM:PF00484
AM286415.1	EMBL	sequence_feature	830364	830426	.	-	.	ID=id1420;Note=PS00705 Prokaryotic-type carbonic anhydrases signature 2.;gbkey=misc_feature;gene=yadF;inference=protein motif:Prosite:PS00705
AM286415.1	EMBL	sequence_feature	830523	830546	.	-	.	ID=id1421;Note=PS00704 Prokaryotic-type carbonic anhydrases signature 1.;gbkey=misc_feature;gene=yadF;inference=protein motif:Prosite:PS00704
AM286415.1	EMBL	gene	830904	831830	.	+	.	ID=gene711;Name=yadG;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=YE0715
AM286415.1	EMBL	CDS	830904	831830	.	+	0	ID=cds675;Parent=gene711;Dbxref=EnsemblGenomes-Gn:YE0715,EnsemblGenomes-Tr:CAL10820,GOA:A1JJN3,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJN3,NCBI_GP:CAL10820.1;Name=CAL10820.1;gbkey=CDS;gene=yadG;product=putative ABC transporter%2C ATP-binding protein;protein_id=CAL10820.1;transl_table=11
AM286415.1	EMBL	sequence_feature	830994	831539	.	+	.	ID=id1422;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 197.0%2C E-value 1.9e-56;gbkey=misc_feature;gene=yadG;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	831015	831038	.	+	.	ID=id1423;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=yadG;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	831312	831356	.	+	.	ID=id1424;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=yadG;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	831827	832597	.	+	.	ID=gene712;Name=yadH;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=YE0716
AM286415.1	EMBL	CDS	831827	832597	.	+	0	ID=cds676;Parent=gene712;Dbxref=EnsemblGenomes-Gn:YE0716,EnsemblGenomes-Tr:CAL10821,GOA:A1JJN4,InterPro:IPR000412,InterPro:IPR013525,UniProtKB/TrEMBL:A1JJN4,NCBI_GP:CAL10821.1;Name=CAL10821.1;gbkey=CDS;gene=yadH;product=putative ABC transporter%2C integral membrane protein;protein_id=CAL10821.1;transl_table=11
AM286415.1	EMBL	sequence_feature	831833	832588	.	+	.	ID=id1425;Note=Pfam match to entry PF01061 ABC2_membrane%2C ABC-2 type transporter%2C score -21.9%2C E-value 3.2e-06;gbkey=misc_feature;gene=yadH;inference=protein motif:PFAM:PF01061
AM286415.1	EMBL	sequence_feature	831884	831952	.	+	.	ID=id1426;Note=6 probable transmembrane helices predicted for YE0716 by TMHMM2.0 at aa 20-42%2C 62-84%2C 104-126%2C 141-163%2C170-192 and 226-248;gbkey=misc_feature;gene=yadH;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	832010	832078	.	+	.	ID=id1426;Note=6 probable transmembrane helices predicted for YE0716 by TMHMM2.0 at aa 20-42%2C 62-84%2C 104-126%2C 141-163%2C170-192 and 226-248;gbkey=misc_feature;gene=yadH;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	832136	832204	.	+	.	ID=id1426;Note=6 probable transmembrane helices predicted for YE0716 by TMHMM2.0 at aa 20-42%2C 62-84%2C 104-126%2C 141-163%2C170-192 and 226-248;gbkey=misc_feature;gene=yadH;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	832247	832315	.	+	.	ID=id1426;Note=6 probable transmembrane helices predicted for YE0716 by TMHMM2.0 at aa 20-42%2C 62-84%2C 104-126%2C 141-163%2C170-192 and 226-248;gbkey=misc_feature;gene=yadH;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	832334	832402	.	+	.	ID=id1426;Note=6 probable transmembrane helices predicted for YE0716 by TMHMM2.0 at aa 20-42%2C 62-84%2C 104-126%2C 141-163%2C170-192 and 226-248;gbkey=misc_feature;gene=yadH;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	832502	832570	.	+	.	ID=id1426;Note=6 probable transmembrane helices predicted for YE0716 by TMHMM2.0 at aa 20-42%2C 62-84%2C 104-126%2C 141-163%2C170-192 and 226-248;gbkey=misc_feature;gene=yadH;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	832358	832471	.	+	.	ID=id1427;Note=PS00890 ABC-2 type transport system integral membrane proteins signature.;gbkey=misc_feature;gene=yadH;inference=protein motif:Prosite:PS00890
AM286415.1	EMBL	gene	833072	834262	.	+	.	ID=gene713;Name=YE0717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0717
AM286415.1	EMBL	CDS	833072	834262	.	+	0	ID=cds677;Parent=gene713;Dbxref=EnsemblGenomes-Gn:YE0717,EnsemblGenomes-Tr:CAL10822,GOA:A1JJN5,InterPro:IPR002509,InterPro:IPR011330,UniProtKB/TrEMBL:A1JJN5,NCBI_GP:CAL10822.1;Name=CAL10822.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10822.1;transl_table=11
AM286415.1	EMBL	sequence_feature	833684	833818	.	+	.	ID=id1428;Note=Pfam match to entry PF01522 Polysacc_deacet%2CPolysaccharide deacetylase%2C score 19.3%2C E-value 1.3e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01522
AM286415.1	EMBL	gene	834502	834882	.	-	.	ID=gene714;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=YE0718
AM286415.1	EMBL	CDS	834502	834882	.	-	0	ID=cds678;Parent=gene714;Dbxref=EnsemblGenomes-Gn:YE0718,EnsemblGenomes-Tr:CAL10823,GOA:A1JJN6,InterPro:IPR003190,InterPro:IPR009010,NCBI_GP:CAL10823.1;Name=CAL10823.1;gbkey=CDS;gene=panD;product=aspartate 1-decarboxylase precursor;protein_id=CAL10823.1;transl_table=11
AM286415.1	EMBL	sequence_feature	834535	834882	.	-	.	ID=id1429;Note=Pfam match to entry PF02261 Asp_decarbox%2C Aspartate decarboxylase%2C score 272.2%2C E-value 4.3e-79;gbkey=misc_feature;gene=panD;inference=protein motif:PFAM:PF02261
AM286415.1	EMBL	gene	835040	835894	.	-	.	ID=gene715;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=YE0719
AM286415.1	EMBL	CDS	835040	835894	.	-	0	ID=cds679;Parent=gene715;Dbxref=EnsemblGenomes-Gn:YE0719,EnsemblGenomes-Tr:CAL10824,GOA:A1JJN7,InterPro:IPR003721,InterPro:IPR014729,NCBI_GP:CAL10824.1;Name=CAL10824.1;gbkey=CDS;gene=panC;product=pantoate--beta-alanine ligase;protein_id=CAL10824.1;transl_table=11
AM286415.1	EMBL	sequence_feature	835055	835891	.	-	.	ID=id1430;Note=Pfam match to entry PF02569 Pantoate_ligase%2CPantoate-beta-alanine ligase%2C score 500.0%2C E-value 1.2e-147;gbkey=misc_feature;gene=panC;inference=protein motif:PFAM:PF02569
AM286415.1	EMBL	gene	836068	836868	.	-	.	ID=gene716;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=YE0720
AM286415.1	EMBL	CDS	836068	836868	.	-	0	ID=cds680;Parent=gene716;Dbxref=EnsemblGenomes-Gn:YE0720,EnsemblGenomes-Tr:CAL10825,GOA:A1JJN8,InterPro:IPR003700,InterPro:IPR015813,NCBI_GP:CAL10825.1;Name=CAL10825.1;gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=CAL10825.1;transl_table=11
AM286415.1	EMBL	sequence_feature	836083	836862	.	-	.	ID=id1431;Note=Pfam match to entry PF02548 Pantoate_transf%2CKetopantoate hydroxymethyltransferase%2C score 548.5%2CE-value 3e-162;gbkey=misc_feature;gene=panB;inference=protein motif:PFAM:PF02548
AM286415.1	EMBL	gene	837102	837581	.	-	.	ID=gene717;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=YE0722
AM286415.1	EMBL	CDS	837102	837581	.	-	0	ID=cds681;Parent=gene717;Dbxref=EnsemblGenomes-Gn:YE0722,EnsemblGenomes-Tr:CAL10826,GOA:A1JJN9,InterPro:IPR000550,UniProtKB/TrEMBL:A1JJN9,NCBI_GP:CAL10826.1;Name=CAL10826.1;gbkey=CDS;gene=folK;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase;protein_id=CAL10826.1;transl_table=11
AM286415.1	EMBL	sequence_feature	837183	837575	.	-	.	ID=id1432;Note=Pfam match to entry PF01288 HPPK%2C7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)%2C score 240.8%2C E-value 1.3e-69;gbkey=misc_feature;gene=folK;inference=protein motif:PFAM:PF01288
AM286415.1	EMBL	sequence_feature	837282	837317	.	-	.	ID=id1433;Note=PS00794 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature.;gbkey=misc_feature;gene=folK;inference=protein motif:Prosite:PS00794
AM286415.1	EMBL	gene	837590	838912	.	-	.	ID=gene718;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=YE0723
AM286415.1	EMBL	CDS	837590	838912	.	-	0	ID=cds682;Parent=gene718;Dbxref=EnsemblGenomes-Gn:YE0723,EnsemblGenomes-Tr:CAL10827,GOA:A1JJP0,InterPro:IPR002646,InterPro:IPR010206,InterPro:IPR025866,UniProtKB/TrEMBL:A1JJP0,NCBI_GP:CAL10827.1;Name=CAL10827.1;gbkey=CDS;gene=pcnB;product=poly(A) polymerase;protein_id=CAL10827.1;transl_table=11
AM286415.1	EMBL	sequence_feature	838133	838639	.	-	.	ID=id1434;Note=Pfam match to entry PF01743 PolyA_pol%2C Poly A polymerase family%2C score 255.4%2C E-value 5e-74;gbkey=misc_feature;gene=pcnB;inference=protein motif:PFAM:PF01743
AM286415.1	EMBL	gene	839209	840069	.	-	.	ID=gene719;Name=yadB;gbkey=Gene;gene=yadB;gene_biotype=protein_coding;locus_tag=YE0724
AM286415.1	EMBL	CDS	839209	840069	.	-	0	ID=cds683;Parent=gene719;Dbxref=EnsemblGenomes-Gn:YE0724,EnsemblGenomes-Tr:CAL10828,GOA:A1JJP1,InterPro:IPR000924,InterPro:IPR014729,InterPro:IPR020058,InterPro:IPR022380,UniProtKB/TrEMBL:A1JJP1,NCBI_GP:CAL10828.1;Name=CAL10828.1;gbkey=CDS;gene=yadB;product=putative glutamyl-tRNA synthetase;protein_id=CAL10828.1;transl_table=11
AM286415.1	EMBL	sequence_feature	839230	840066	.	-	.	ID=id1435;Note=Pfam match to entry PF00749 tRNA-synt_1c%2C tRNA synthetases class I (E and Q)%2C catalytic domain%2C score 31.8%2C E-value 2.4e-17;gbkey=misc_feature;gene=yadB;inference=protein motif:PFAM:PF00749
AM286415.1	EMBL	gene	840279	840734	.	-	.	ID=gene720;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=YE0725
AM286415.1	EMBL	CDS	840279	840734	.	-	0	ID=cds684;Parent=gene720;Dbxref=EnsemblGenomes-Gn:YE0725,EnsemblGenomes-Tr:CAL10829,GOA:A1JJP2,InterPro:IPR000962,InterPro:IPR012784,InterPro:IPR020458,InterPro:IPR020460,UniProtKB/TrEMBL:A1JJP2,NCBI_GP:CAL10829.1;Name=CAL10829.1;gbkey=CDS;gene=dksA;product=DnaK suppressor protein homologue;protein_id=CAL10829.1;transl_table=11
AM286415.1	EMBL	sequence_feature	840297	840509	.	-	.	ID=id1436;Note=Pfam match to entry PF01258 zf_dskA_traR%2CProkaryotic dksA/traR C4-type zinc finger%2C score 127.0%2CE-value 2.3e-35;gbkey=misc_feature;gene=dksA;inference=protein motif:PFAM:PF01258
AM286415.1	EMBL	sequence_feature	840321	840395	.	-	.	ID=id1437;Note=PS01102 Prokaryotic dksA/traR C4-type zinc finger.;gbkey=misc_feature;gene=dksA;inference=protein motif:Prosite:PS01102
AM286415.1	EMBL	gene	840914	841639	.	-	.	ID=gene721;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;gene_synonym=sfs1;locus_tag=YE0726
AM286415.1	EMBL	CDS	840914	841639	.	-	0	ID=cds685;Parent=gene721;Dbxref=EnsemblGenomes-Gn:YE0726,EnsemblGenomes-Tr:CAL10830,InterPro:IPR005224,NCBI_GP:CAL10830.1;Name=CAL10830.1;gbkey=CDS;gene=sfsA;product=sugar fermentation stimulation protein;protein_id=CAL10830.1;transl_table=11
AM286415.1	EMBL	sequence_feature	840944	841600	.	-	.	ID=id1438;Note=Pfam match to entry PF03749 SfsA%2C Sugar fermentation stimulation protein%2C score 352.7%2C E-value 2.6e-103;gbkey=misc_feature;gene=sfsA;inference=protein motif:PFAM:PF03749
AM286415.1	EMBL	sequence_feature	841505	841537	.	-	.	ID=id1439;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=sfsA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	841669	842226	.	-	.	ID=gene722;Name=ligT;gbkey=Gene;gene=ligT;gene_biotype=protein_coding;locus_tag=YE0727
AM286415.1	EMBL	CDS	841669	842226	.	-	0	ID=cds686;Parent=gene722;Dbxref=EnsemblGenomes-Gn:YE0727,EnsemblGenomes-Tr:CAL10831,GOA:A1JJP4,InterPro:IPR004175,InterPro:IPR009097,InterPro:IPR014051,UniProtKB/TrEMBL:A1JJP4,NCBI_GP:CAL10831.1;Name=CAL10831.1;gbkey=CDS;gene=ligT;product=putative 2'-5' RNA ligase;protein_id=CAL10831.1;transl_table=11
AM286415.1	EMBL	sequence_feature	841930	841962	.	-	.	ID=id1440;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ligT;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	841939	842175	.	-	.	ID=id1441;Note=Pfam match to entry PF02834 2_5_ligase%2C 2'%2C5' RNA ligase family%2C score 31.1%2C E-value 1.6e-06;gbkey=misc_feature;gene=ligT;inference=protein motif:PFAM:PF02834
AM286415.1	EMBL	gene	842483	844789	.	+	.	ID=gene723;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=YE0728
AM286415.1	EMBL	CDS	842483	844789	.	+	0	ID=cds687;Parent=gene723;Dbxref=EnsemblGenomes-Gn:YE0728,EnsemblGenomes-Tr:CAL10832,GOA:A1JJP5,InterPro:IPR001650,InterPro:IPR007502,InterPro:IPR010225,InterPro:IPR011545,InterPro:IPR013689,InterPro:IPR014001,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJP5,NCBI_GP:CAL10832.1;Name=CAL10832.1;gbkey=CDS;gene=hrpB;product=ATP-dependent helicase;protein_id=CAL10832.1;transl_table=11
AM286415.1	EMBL	sequence_feature	842636	842911	.	+	.	ID=id1442;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 20.5%2C E-value 1.6e-06;gbkey=misc_feature;gene=hrpB;inference=protein motif:PFAM:PF00270
AM286415.1	EMBL	sequence_feature	843059	843328	.	+	.	ID=id1443;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 56.0%2C E-value 5.5e-14;gbkey=misc_feature;gene=hrpB;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	gene	844897	847401	.	+	.	ID=gene724;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=b0149,pbpF,ponB;locus_tag=YE0729
AM286415.1	EMBL	CDS	844897	847401	.	+	0	ID=cds688;Parent=gene724;Dbxref=EnsemblGenomes-Gn:YE0729,EnsemblGenomes-Tr:CAL10833,GOA:A1JJP6,InterPro:IPR001264,InterPro:IPR001460,InterPro:IPR011813,InterPro:IPR012338,InterPro:IPR023346,InterPro:IPR027417,InterPro:IPR028166,UniProtKB/TrEMBL:A1JJP6,NCBI_GP:CAL10833.1;Name=CAL10833.1;gbkey=CDS;gene=mrcB;product=penicillin-binding protein 1B;protein_id=CAL10833.1;transl_table=11
AM286415.1	EMBL	sequence_feature	845131	845199	.	+	.	ID=id1444;Note=1 probable transmembrane helix predicted for YE0729 by TMHMM2.0 at aa 79-101;gbkey=misc_feature;gene=mrcB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	845521	846039	.	+	.	ID=id1445;Note=Pfam match to entry PF00912 Transglycosyl%2CTransglycosylase%2C score 337.8%2C E-value 8.1e-99;gbkey=misc_feature;gene=mrcB;inference=protein motif:PFAM:PF00912
AM286415.1	EMBL	sequence_feature	846268	847179	.	+	.	ID=id1446;Note=Pfam match to entry PF00905 Transpeptidase%2CPenicillin binding protein transpeptidase domain%2C score 17.9%2C E-value 1.5e-11;gbkey=misc_feature;gene=mrcB;inference=protein motif:PFAM:PF00905
AM286415.1	EMBL	gene	847658	848452	.	+	.	ID=gene725;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=YE0730
AM286415.1	EMBL	CDS	847658	848452	.	+	0	ID=cds689;Parent=gene725;Dbxref=EnsemblGenomes-Gn:YE0730,EnsemblGenomes-Tr:CAL10834,GOA:A1JJP7,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJP7,NCBI_GP:CAL10834.1;Name=CAL10834.1;gbkey=CDS;gene=fhuC;product=ferrichrome transport ATP-binding protein FhuC;protein_id=CAL10834.1;transl_table=11
AM286415.1	EMBL	sequence_feature	847763	848326	.	+	.	ID=id1447;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 205.0%2C E-value 7.3e-59;gbkey=misc_feature;gene=fhuC;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	847784	847807	.	+	.	ID=id1448;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=fhuC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	848096	848140	.	+	.	ID=id1449;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=fhuC;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	848599	849381	.	+	.	ID=gene726;Name=fhuD;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=YE0731
AM286415.1	EMBL	CDS	848599	849381	.	+	0	ID=cds690;Parent=gene726;Dbxref=EnsemblGenomes-Gn:YE0731,EnsemblGenomes-Tr:CAL10835,InterPro:IPR002491,InterPro:IPR008091,UniProtKB/TrEMBL:A1JJP8,NCBI_GP:CAL10835.1;Name=CAL10835.1;gbkey=CDS;gene=fhuD;product=ferrichrome-binding periplasmic protein precursor;protein_id=CAL10835.1;transl_table=11
AM286415.1	EMBL	sequence_feature	848599	849306	.	+	.	ID=id1450;Note=Pfam match to entry PF01497 Peripla_BP_2%2CPeriplasmic binding protein%2C score 44.0%2C E-value 2.2e-10;gbkey=misc_feature;gene=fhuD;inference=protein motif:PFAM:PF01497
AM286415.1	EMBL	sequence_feature	849151	849180	.	+	.	ID=id1451;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=fhuD;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	849378	851375	.	+	.	ID=gene727;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=YE0732
AM286415.1	EMBL	CDS	849378	851375	.	+	0	ID=cds691;Parent=gene727;Dbxref=EnsemblGenomes-Gn:YE0732,EnsemblGenomes-Tr:CAL10836,GOA:A1JJP9,InterPro:IPR000522,InterPro:IPR029022,UniProtKB/TrEMBL:A1JJP9,NCBI_GP:CAL10836.1;Name=CAL10836.1;gbkey=CDS;gene=fhuB;product=ferrichrome transport system permease protein FhuB;protein_id=CAL10836.1;transl_table=11
AM286415.1	EMBL	sequence_feature	849402	849470	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=1/20
AM286415.1	EMBL	sequence_feature	849573	849626	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=2/20
AM286415.1	EMBL	sequence_feature	849660	849719	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=3/20
AM286415.1	EMBL	sequence_feature	849747	849806	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=4/20
AM286415.1	EMBL	sequence_feature	849825	849893	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=5/20
AM286415.1	EMBL	sequence_feature	849969	850028	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=6/20
AM286415.1	EMBL	sequence_feature	850065	850133	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=7/20
AM286415.1	EMBL	sequence_feature	850143	850202	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=8/20
AM286415.1	EMBL	sequence_feature	850221	850289	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=9/20
AM286415.1	EMBL	sequence_feature	850317	850370	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=10/20
AM286415.1	EMBL	sequence_feature	850431	850499	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=11/20
AM286415.1	EMBL	sequence_feature	850557	850625	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=12/20
AM286415.1	EMBL	sequence_feature	850662	850718	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=13/20
AM286415.1	EMBL	sequence_feature	850728	850796	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=14/20
AM286415.1	EMBL	sequence_feature	850833	850892	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=15/20
AM286415.1	EMBL	sequence_feature	850935	851003	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=16/20
AM286415.1	EMBL	sequence_feature	851022	851081	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=17/20
AM286415.1	EMBL	sequence_feature	851091	851159	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=18/20
AM286415.1	EMBL	sequence_feature	851193	851261	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=19/20
AM286415.1	EMBL	sequence_feature	851289	851357	.	+	.	ID=id1452;Note=20 probable transmembrane helices predicted for YE0732 by TMHMM2.0 at aa 9-31%2C 66-83%2C 95-114%2C 124-143%2C150-172%2C 198-217%2C 230-252%2C 256-275%2C 282-304%2C 314-331%2C352-374%2C 394-416%2C 429-447%2C 451-473%2C 486-505%2C 520-542%2C549-568%2C 572-594%2C 606-628 and 638-660;gbkey=misc_feature;gene=fhuB;inference=protein motif:TMHMM:2.0;part=20/20
AM286415.1	EMBL	sequence_feature	849474	850367	.	+	.	ID=id1453;Note=Pfam match to entry PF01032 FecCD%2C FecCD transport family%2C score 156.6%2C E-value 2.8e-44;gbkey=misc_feature;gene=fhuB;inference=protein motif:PFAM:PF01032
AM286415.1	EMBL	sequence_feature	850482	851363	.	+	.	ID=id1454;Note=Pfam match to entry PF01032 FecCD%2C FecCD transport family%2C score 198.4%2C E-value 7.3e-57;gbkey=misc_feature;gene=fhuB;inference=protein motif:PFAM:PF01032
AM286415.1	EMBL	gene	851651	853042	.	-	.	ID=gene728;Name=nark;gbkey=Gene;gene=nark;gene_biotype=protein_coding;locus_tag=YE0733
AM286415.1	EMBL	CDS	851651	853042	.	-	0	ID=cds692;Parent=gene728;Dbxref=EnsemblGenomes-Gn:YE0733,EnsemblGenomes-Tr:CAL10837,GOA:A1JJQ0,InterPro:IPR004737,InterPro:IPR011701,InterPro:IPR016196,UniProtKB/TrEMBL:A1JJQ0,NCBI_GP:CAL10837.1;Name=CAL10837.1;Note=Similar to members of the major facilitator superfamily of transport proteins: Escherichia coli nitrite extrusion protein 1 Nark or b1223 SWALL:NARK_ECOLI (SWALL:P10903) (463 aa) fasta scores: E(): 9.4e-115%2C61.13 38d in 458 aa and Salmonella typhi nitrite extrusion protein Sty1287 SWALL:Q8Z7G0 (EMBL:AL627269) (465 aa) fasta scores: E(): 8.2e-115%2C 61.35 38d in 458 aa;gbkey=CDS;gene=nark;inference=similar to sequence:UniProtKB:P10903;product=nitrite extrusion protein;protein_id=CAL10837.1;transl_table=11
AM286415.1	EMBL	sequence_feature	852860	852928	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	852749	852817	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	852671	852730	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	852575	852643	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	852446	852514	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	852335	852403	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	852206	852274	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	852110	852178	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	852029	852097	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	851933	852001	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	851780	851833	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	851669	851737	.	-	.	ID=id1455;Note=12 probable transmembrane helices predicted for YE0733 by TMHMM2.0 at aa 39-61%2C 76-98%2C 105-124%2C 134-156%2C177-199%2C 214-236%2C 257-279%2C 289-311%2C 316-338%2C 348-370%2C404-421 and 436-458;gbkey=misc_feature;gene=nark;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	853456	854736	.	-	.	ID=gene729;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;gene_synonym=gsa,popC;locus_tag=YE0734
AM286415.1	EMBL	CDS	853456	854736	.	-	0	ID=cds693;Parent=gene729;Dbxref=EnsemblGenomes-Gn:YE0734,EnsemblGenomes-Tr:CAL10838,GOA:A1JJQ1,InterPro:IPR004639,InterPro:IPR005814,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,NCBI_GP:CAL10838.1;Name=CAL10838.1;gbkey=CDS;gene=hemL;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=CAL10838.1;transl_table=11
AM286415.1	EMBL	sequence_feature	853459	854670	.	-	.	ID=id1456;Note=Pfam match to entry PF00202 aminotran_3%2CAminotransferase class-III%2C score 391.6%2C E-value 5.1e-115;gbkey=misc_feature;gene=hemL;inference=protein motif:PFAM:PF00202
AM286415.1	EMBL	sequence_feature	853804	853836	.	-	.	ID=id1457;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hemL;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	853927	854037	.	-	.	ID=id1458;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=hemL;inference=protein motif:Prosite:PS00600
AM286415.1	EMBL	gene	855114	856436	.	+	.	ID=gene730;Name=yadQ;gbkey=Gene;gene=yadQ;gene_biotype=protein_coding;locus_tag=YE0735
AM286415.1	EMBL	CDS	855114	856436	.	+	0	ID=cds694;Parent=gene730;Dbxref=EnsemblGenomes-Gn:YE0735,EnsemblGenomes-Tr:CAL10839,GOA:A1JJQ2,InterPro:IPR001807,InterPro:IPR014743,UniProtKB/TrEMBL:A1JJQ2,NCBI_GP:CAL10839.1;Name=CAL10839.1;gbkey=CDS;gene=yadQ;product=putative chloride channel protein;protein_id=CAL10839.1;transl_table=11
AM286415.1	EMBL	sequence_feature	855225	855293	.	+	.	ID=id1459;Note=10 probable transmembrane helices predicted for YE0735 by TMHMM2.0 at aa 38-60%2C 87-109%2C 142-164%2C 173-195%2C215-237%2C 254-276%2C 280-302%2C 309-331%2C 353-375 and 382-404;gbkey=misc_feature;gene=yadQ;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	855372	855440	.	+	.	ID=id1459;Note=10 probable transmembrane helices predicted for YE0735 by TMHMM2.0 at aa 38-60%2C 87-109%2C 142-164%2C 173-195%2C215-237%2C 254-276%2C 280-302%2C 309-331%2C 353-375 and 382-404;gbkey=misc_feature;gene=yadQ;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	855537	855605	.	+	.	ID=id1459;Note=10 probable transmembrane helices predicted for YE0735 by TMHMM2.0 at aa 38-60%2C 87-109%2C 142-164%2C 173-195%2C215-237%2C 254-276%2C 280-302%2C 309-331%2C 353-375 and 382-404;gbkey=misc_feature;gene=yadQ;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	855630	855698	.	+	.	ID=id1459;Note=10 probable transmembrane helices predicted for YE0735 by TMHMM2.0 at aa 38-60%2C 87-109%2C 142-164%2C 173-195%2C215-237%2C 254-276%2C 280-302%2C 309-331%2C 353-375 and 382-404;gbkey=misc_feature;gene=yadQ;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	855756	855824	.	+	.	ID=id1459;Note=10 probable transmembrane helices predicted for YE0735 by TMHMM2.0 at aa 38-60%2C 87-109%2C 142-164%2C 173-195%2C215-237%2C 254-276%2C 280-302%2C 309-331%2C 353-375 and 382-404;gbkey=misc_feature;gene=yadQ;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	855873	855941	.	+	.	ID=id1459;Note=10 probable transmembrane helices predicted for YE0735 by TMHMM2.0 at aa 38-60%2C 87-109%2C 142-164%2C 173-195%2C215-237%2C 254-276%2C 280-302%2C 309-331%2C 353-375 and 382-404;gbkey=misc_feature;gene=yadQ;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	855951	856019	.	+	.	ID=id1459;Note=10 probable transmembrane helices predicted for YE0735 by TMHMM2.0 at aa 38-60%2C 87-109%2C 142-164%2C 173-195%2C215-237%2C 254-276%2C 280-302%2C 309-331%2C 353-375 and 382-404;gbkey=misc_feature;gene=yadQ;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	856038	856106	.	+	.	ID=id1459;Note=10 probable transmembrane helices predicted for YE0735 by TMHMM2.0 at aa 38-60%2C 87-109%2C 142-164%2C 173-195%2C215-237%2C 254-276%2C 280-302%2C 309-331%2C 353-375 and 382-404;gbkey=misc_feature;gene=yadQ;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	856170	856238	.	+	.	ID=id1459;Note=10 probable transmembrane helices predicted for YE0735 by TMHMM2.0 at aa 38-60%2C 87-109%2C 142-164%2C 173-195%2C215-237%2C 254-276%2C 280-302%2C 309-331%2C 353-375 and 382-404;gbkey=misc_feature;gene=yadQ;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	856257	856325	.	+	.	ID=id1459;Note=10 probable transmembrane helices predicted for YE0735 by TMHMM2.0 at aa 38-60%2C 87-109%2C 142-164%2C 173-195%2C215-237%2C 254-276%2C 280-302%2C 309-331%2C 353-375 and 382-404;gbkey=misc_feature;gene=yadQ;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	855255	856322	.	+	.	ID=id1460;Note=Pfam match to entry PF00654 voltage_CLC%2C Voltage gated chloride channel%2C score 371.2%2C E-value 7.1e-109;gbkey=misc_feature;gene=yadQ;inference=protein motif:PFAM:PF00654
AM286415.1	EMBL	sequence_feature	855519	855551	.	+	.	ID=id1461;Note=PS00639 Eukaryotic thiol (cysteine) proteases histidine active site.;gbkey=misc_feature;gene=yadQ;inference=protein motif:Prosite:PS00639
AM286415.1	EMBL	sequence_feature	856095	856127	.	+	.	ID=id1462;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yadQ;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	856554	856898	.	+	.	ID=gene731;Name=YE0736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0736
AM286415.1	EMBL	CDS	856554	856898	.	+	0	ID=cds695;Parent=gene731;Dbxref=EnsemblGenomes-Gn:YE0736,EnsemblGenomes-Tr:CAL10840,GOA:A1JJQ3,InterPro:IPR000361,InterPro:IPR016092,InterPro:IPR017870,InterPro:IPR023063,NCBI_GP:CAL10840.1;Name=CAL10840.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10840.1;transl_table=11
AM286415.1	EMBL	sequence_feature	856575	856892	.	+	.	ID=id1463;Note=Pfam match to entry PF01521 HesB-like%2C HesB-like domain%2C score 201.0%2C E-value 1.2e-57;gbkey=misc_feature;inference=protein motif:PFAM:PF01521
AM286415.1	EMBL	sequence_feature	856836	856889	.	+	.	ID=id1464;Note=PS01152 Hypothetical hesB/yadR/yfhF family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01152
AM286415.1	EMBL	gene	857611	858222	.	-	.	ID=gene732;Name=yadS;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=YE0737
AM286415.1	EMBL	CDS	857611	858222	.	-	0	ID=cds696;Parent=gene732;Dbxref=EnsemblGenomes-Gn:YE0737,EnsemblGenomes-Tr:CAL10841,InterPro:IPR005115,UniProtKB/TrEMBL:A1JJQ4,NCBI_GP:CAL10841.1;Name=CAL10841.1;gbkey=CDS;gene=yadS;product=putative membrane protein;protein_id=CAL10841.1;transl_table=11
AM286415.1	EMBL	sequence_feature	858154	858213	.	-	.	ID=id1465;Note=7 probable transmembrane helices predicted for YE0737 by TMHMM2.0 at aa 4-23%2C 30-52%2C 62-79%2C 88-105%2C115-137%2C 149-168 and 172-191;gbkey=misc_feature;gene=yadS;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	858067	858135	.	-	.	ID=id1465;Note=7 probable transmembrane helices predicted for YE0737 by TMHMM2.0 at aa 4-23%2C 30-52%2C 62-79%2C 88-105%2C115-137%2C 149-168 and 172-191;gbkey=misc_feature;gene=yadS;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	857986	858039	.	-	.	ID=id1465;Note=7 probable transmembrane helices predicted for YE0737 by TMHMM2.0 at aa 4-23%2C 30-52%2C 62-79%2C 88-105%2C115-137%2C 149-168 and 172-191;gbkey=misc_feature;gene=yadS;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	857908	857961	.	-	.	ID=id1465;Note=7 probable transmembrane helices predicted for YE0737 by TMHMM2.0 at aa 4-23%2C 30-52%2C 62-79%2C 88-105%2C115-137%2C 149-168 and 172-191;gbkey=misc_feature;gene=yadS;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	857812	857880	.	-	.	ID=id1465;Note=7 probable transmembrane helices predicted for YE0737 by TMHMM2.0 at aa 4-23%2C 30-52%2C 62-79%2C 88-105%2C115-137%2C 149-168 and 172-191;gbkey=misc_feature;gene=yadS;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	857719	857778	.	-	.	ID=id1465;Note=7 probable transmembrane helices predicted for YE0737 by TMHMM2.0 at aa 4-23%2C 30-52%2C 62-79%2C 88-105%2C115-137%2C 149-168 and 172-191;gbkey=misc_feature;gene=yadS;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	857650	857709	.	-	.	ID=id1465;Note=7 probable transmembrane helices predicted for YE0737 by TMHMM2.0 at aa 4-23%2C 30-52%2C 62-79%2C 88-105%2C115-137%2C 149-168 and 172-191;gbkey=misc_feature;gene=yadS;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	857698	857955	.	-	.	ID=id1466;Note=Pfam match to entry PF03458 UPF0126%2C UPF0126 domain%2C score 121.8%2C E-value 8.1e-34;gbkey=misc_feature;gene=yadS;inference=protein motif:PFAM:PF03458
AM286415.1	EMBL	sequence_feature	857959	858216	.	-	.	ID=id1467;Note=Pfam match to entry PF03458 UPF0126%2C UPF0126 domain%2C score 129.2%2C E-value 4.8e-36;gbkey=misc_feature;gene=yadS;inference=protein motif:PFAM:PF03458
AM286415.1	EMBL	gene	858222	859025	.	-	.	ID=gene733;Name=yadT;gbkey=Gene;gene=yadT;gene_biotype=protein_coding;gene_synonym=btuF;locus_tag=YE0738
AM286415.1	EMBL	CDS	858222	859025	.	-	0	ID=cds697;Parent=gene733;Dbxref=EnsemblGenomes-Gn:YE0738,EnsemblGenomes-Tr:CAL10842,GOA:A1JJQ5,InterPro:IPR002491,InterPro:IPR023544,UniProtKB/TrEMBL:A1JJQ5,NCBI_GP:CAL10842.1;Name=CAL10842.1;gbkey=CDS;gene=yadT;product=putative priplasmic metal binding protein;protein_id=CAL10842.1;transl_table=11
AM286415.1	EMBL	sequence_feature	858315	858989	.	-	.	ID=id1468;Note=Pfam match to entry PF01497 Peripla_BP_2%2CPeriplasmic binding protein%2C score 136.2%2C E-value 3.8e-38;gbkey=misc_feature;gene=yadT;inference=protein motif:PFAM:PF01497
AM286415.1	EMBL	gene	859085	859786	.	-	.	ID=gene734;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;gene_synonym=pfs;locus_tag=YE0739
AM286415.1	EMBL	CDS	859085	859786	.	-	0	ID=cds698;Parent=gene734;Dbxref=EnsemblGenomes-Gn:YE0739,EnsemblGenomes-Tr:CAL10843,GOA:A1JJQ6,InterPro:IPR000845,InterPro:IPR010049,InterPro:IPR018017,NCBI_GP:CAL10843.1;Name=CAL10843.1;gbkey=CDS;gene=mtnN;product=MTA/SAH nucleosidase;protein_id=CAL10843.1;transl_table=11
AM286415.1	EMBL	sequence_feature	859109	859783	.	-	.	ID=id1469;Note=Pfam match to entry PF01048 PNP_UDP_1%2CPhosphorylase family%2C score 327.0%2C E-value 1.4e-95;gbkey=misc_feature;gene=mtnN;inference=protein motif:PFAM:PF01048
AM286415.1	EMBL	gene	859995	861512	.	+	.	ID=gene735;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=YE0740
AM286415.1	EMBL	CDS	859995	861512	.	+	0	ID=cds699;Parent=gene735;Dbxref=EnsemblGenomes-Gn:YE0740,EnsemblGenomes-Tr:CAL10844,GOA:A1JJQ7,InterPro:IPR003607,InterPro:IPR006261,InterPro:IPR006674,InterPro:IPR020779,InterPro:IPR023293,InterPro:IPR026875,InterPro:IPR027432,NCBI_GP:CAL10844.1;Name=CAL10844.1;gbkey=CDS;gene=dgt;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=CAL10844.1;transl_table=11
AM286415.1	EMBL	sequence_feature	860190	860552	.	+	.	ID=id1470;Note=Pfam match to entry PF01966 HD%2C HD domain%2C score 24.0%2C E-value 0.00011;gbkey=misc_feature;gene=dgt;inference=protein motif:PFAM:PF01966
AM286415.1	EMBL	gene	861811	863247	.	+	.	ID=gene736;Name=gsrA;gbkey=Gene;gene=gsrA;gene_biotype=protein_coding;gene_synonym=degP,htrA,ptd;locus_tag=YE0741
AM286415.1	EMBL	CDS	861811	863247	.	+	0	ID=cds700;Parent=gene736;Dbxref=EnsemblGenomes-Gn:YE0741,EnsemblGenomes-Tr:CAL10845,GOA:A1JJQ8,InterPro:IPR001478,InterPro:IPR001940,InterPro:IPR009003,InterPro:IPR011782,UniProtKB/TrEMBL:A1JJQ8,NCBI_GP:CAL10845.1;Name=CAL10845.1;gbkey=CDS;gene=gsrA;product=global stress requirement protein GsrA;protein_id=CAL10845.1;transl_table=11
AM286415.1	EMBL	sequence_feature	861823	861891	.	+	.	ID=id1471;Note=1 probable transmembrane helix predicted for YE0741 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;gene=gsrA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	862078	862647	.	+	.	ID=id1472;Note=Pfam match to entry PF00089 trypsin%2C Trypsin %2Cscore 110.6%2C E-value 2e-30;gbkey=misc_feature;gene=gsrA;inference=protein motif:PFAM:PF00089
AM286415.1	EMBL	sequence_feature	862651	862926	.	+	.	ID=id1473;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF)%2C score 74.2%2C E-value 1.8e-19;gbkey=misc_feature;gene=gsrA;inference=protein motif:PFAM:PF00595
AM286415.1	EMBL	sequence_feature	862969	863217	.	+	.	ID=id1474;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF)%2C score 65.3%2C E-value 8.3e-17;gbkey=misc_feature;gene=gsrA;inference=protein motif:PFAM:PF00595
AM286415.1	EMBL	gene	863360	866194	.	-	.	ID=gene737;Name=barA;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=YE0742
AM286415.1	EMBL	CDS	863360	866194	.	-	0	ID=cds701;Parent=gene737;Dbxref=EnsemblGenomes-Gn:YE0742,EnsemblGenomes-Tr:CAL10846,GOA:A1JJQ9,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR008207,InterPro:IPR009082,InterPro:IPR011006,InterPro:IPR019247,UniProtKB/TrEMBL:A1JJQ9,NCBI_GP:CAL10846.1;Name=CAL10846.1;gbkey=CDS;gene=barA;product=two-component regulatory protein;protein_id=CAL10846.1;transl_table=11
AM286415.1	EMBL	sequence_feature	863372	863638	.	-	.	ID=id1475;Note=Pfam match to entry PF01627 Hpt%2C Hpt domain%2C score 20.9%2C E-value 1.8e-06;gbkey=misc_feature;gene=barA;inference=protein motif:PFAM:PF01627
AM286415.1	EMBL	sequence_feature	863828	864193	.	-	.	ID=id1476;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 129.4%2C E-value 4.1e-36;gbkey=misc_feature;gene=barA;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	864641	864988	.	-	.	ID=id1477;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 139.5%2C E-value 3.8e-39;gbkey=misc_feature;gene=barA;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	865127	865324	.	-	.	ID=id1478;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 88.9%2C E-value 6.6e-24;gbkey=misc_feature;gene=barA;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	865451	865660	.	-	.	ID=id1479;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 52.6%2C E-value 5.6e-13;gbkey=misc_feature;gene=barA;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	866099	866167	.	-	.	ID=id1480;Note=2 probable transmembrane helices predicted for YE0742 by TMHMM2.0 at aa 10-32 and 176-198;gbkey=misc_feature;gene=barA;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	865601	865669	.	-	.	ID=id1480;Note=2 probable transmembrane helices predicted for YE0742 by TMHMM2.0 at aa 10-32 and 176-198;gbkey=misc_feature;gene=barA;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	866251	867582	.	+	.	ID=gene738;Name=rumA;gbkey=Gene;gene=rumA;gene_biotype=protein_coding;locus_tag=YE0743
AM286415.1	EMBL	CDS	866251	867582	.	+	0	ID=cds702;Parent=gene738;Dbxref=EnsemblGenomes-Gn:YE0743,EnsemblGenomes-Tr:CAL10847,GOA:A1JJR0,InterPro:IPR001566,InterPro:IPR002792,InterPro:IPR010280,InterPro:IPR012340,InterPro:IPR029063,NCBI_GP:CAL10847.1;Name=CAL10847.1;Note=Highly similar to Escherichia coli 23s rRNA (uracil-5-)-methyltransferase RumA or b2785 SWALL:RUMA_ECOLI (SWALL:P55135) (432 aa) fasta scores: E(): 8.6e-104%2C 61.52 38d in 434 aa%2C and to Vibrio cholerae 23s rRNA (uracil-5-)-methyltransferase RumA or vc2452 SWALL:RUMA_VIBCH (SWALL:Q9KPC1) (440 aa) fasta scores: E(): 7.9e-83%2C 50.68 38d in 440 aa;gbkey=CDS;gene=rumA;inference=similar to sequence:UniProtKB:Q9KPC1;product=23s rRNA (uracil-5-)-methyltransferase;protein_id=CAL10847.1;transl_table=11
AM286415.1	EMBL	sequence_feature	866278	866454	.	+	.	ID=id1481;Note=Pfam match to entry PF01938 TRAM%2C TRAM domain %2Cscore 59.7%2C E-value 4e-15;gbkey=misc_feature;gene=rumA;inference=protein motif:PFAM:PF01938
AM286415.1	EMBL	sequence_feature	867118	867213	.	+	.	ID=id1482;Note=Pfam match to entry PF02475 Met_10%2C Met-10+ like-protein%2C score 21.7%2C E-value 1.8e-06;gbkey=misc_feature;gene=rumA;inference=protein motif:PFAM:PF02475
AM286415.1	EMBL	sequence_feature	867355	867447	.	+	.	ID=id1483;Note=PS01230 RNA methyltransferase trmA family signature 1.;gbkey=misc_feature;gene=rumA;inference=protein motif:Prosite:PS01230
AM286415.1	EMBL	sequence_feature	867508	867540	.	+	.	ID=id1484;Note=PS01231 RNA methyltransferase trmA family signature 2.;gbkey=misc_feature;gene=rumA;inference=protein motif:Prosite:PS01231
AM286415.1	EMBL	gene	867592	869826	.	+	.	ID=gene739;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=YE0744
AM286415.1	EMBL	CDS	867592	869826	.	+	0	ID=cds703;Parent=gene739;Dbxref=EnsemblGenomes-Gn:YE0744,EnsemblGenomes-Tr:CAL10848,GOA:A1JJR1,InterPro:IPR002912,InterPro:IPR004095,InterPro:IPR004811,InterPro:IPR007685,InterPro:IPR012675,InterPro:IPR012676,UniProtKB/TrEMBL:A1JJR1,NCBI_GP:CAL10848.1;Name=CAL10848.1;gbkey=CDS;gene=relA;product=GTP pyrophosphokinase;protein_id=CAL10848.1;transl_table=11
AM286415.1	EMBL	sequence_feature	868792	868983	.	+	.	ID=id1485;Note=Pfam match to entry PF02824 TGS%2C TGS domain%2C score 116.3%2C E-value 3.7e-32;gbkey=misc_feature;gene=relA;inference=protein motif:PFAM:PF02824
AM286415.1	EMBL	sequence_feature	869590	869814	.	+	.	ID=id1486;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 56.3%2C E-value 4.2e-14;gbkey=misc_feature;gene=relA;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	gene	870102	870944	.	+	.	ID=gene740;Name=YE0745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0745
AM286415.1	EMBL	CDS	870102	870944	.	+	0	ID=cds704;Parent=gene740;Dbxref=EnsemblGenomes-Gn:YE0745,EnsemblGenomes-Tr:CAL10849,InterPro:IPR004518,InterPro:IPR011551,UniProtKB/TrEMBL:A1JJR2,NCBI_GP:CAL10849.1;Name=CAL10849.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10849.1;transl_table=11
AM286415.1	EMBL	sequence_feature	870162	870845	.	+	.	ID=id1487;Note=Pfam match to entry PF03819 MazG%2C MazG family protein%2C score 472.9%2C E-value 1.6e-139;gbkey=misc_feature;inference=protein motif:PFAM:PF03819
AM286415.1	EMBL	gene	871156	872793	.	+	.	ID=gene741;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=YE0746
AM286415.1	EMBL	CDS	871156	872793	.	+	0	ID=cds705;Parent=gene741;Dbxref=EnsemblGenomes-Gn:YE0746,EnsemblGenomes-Tr:CAL10850,GOA:A1JJR3,InterPro:IPR004468,InterPro:IPR017456,InterPro:IPR017926,InterPro:IPR027417,InterPro:IPR029062,NCBI_GP:CAL10850.1;Name=CAL10850.1;gbkey=CDS;gene=pyrG;product=CTP synthase;protein_id=CAL10850.1;transl_table=11
AM286415.1	EMBL	sequence_feature	871174	871242	.	+	.	ID=id1488;Note=1 probable transmembrane helix predicted for YE0746 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=pyrG;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	872053	872760	.	+	.	ID=id1489;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 271.6%2C E-value 6.7e-79;gbkey=misc_feature;gene=pyrG;inference=protein motif:PFAM:PF00117
AM286415.1	EMBL	sequence_feature	872275	872310	.	+	.	ID=id1490;Note=PS00442 Glutamine amidotransferases class-I active site.;gbkey=misc_feature;gene=pyrG;inference=protein motif:Prosite:PS00442
AM286415.1	EMBL	gene	872873	874168	.	+	.	ID=gene742;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=YE0747
AM286415.1	EMBL	CDS	872873	874168	.	+	0	ID=cds706;Parent=gene742;Dbxref=EnsemblGenomes-Gn:YE0747,EnsemblGenomes-Tr:CAL10851,GOA:A1JJR4,InterPro:IPR000941,InterPro:IPR020809,InterPro:IPR020810,InterPro:IPR020811,InterPro:IPR029017,InterPro:IPR029065,NCBI_GP:CAL10851.1;Name=CAL10851.1;gbkey=CDS;gene=eno;product=enolase;protein_id=CAL10851.1;transl_table=11
AM286415.1	EMBL	sequence_feature	872879	873274	.	+	.	ID=id1491;Note=Pfam match to entry PF03952 enolase_N%2C Enolase%2CN-terminal domain%2C score 242.7%2C E-value 3.3e-70;gbkey=misc_feature;gene=eno;inference=protein motif:PFAM:PF03952
AM286415.1	EMBL	sequence_feature	873299	874165	.	+	.	ID=id1492;Note=Pfam match to entry PF00113 enolase%2C Enolase%2CC-terminal TIM barrel domain%2C score 625.5%2C E-value 1.9e-185;gbkey=misc_feature;gene=eno;inference=protein motif:PFAM:PF00113
AM286415.1	EMBL	sequence_feature	873887	873928	.	+	.	ID=id1493;Note=PS00164 Enolase signature.;gbkey=misc_feature;gene=eno;inference=protein motif:Prosite:PS00164
AM286415.1	EMBL	repeat_region	874220	875569	.	+	.	ID=id1494;Note=insertion element IS1328;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	874220	874239	.	+	.	ID=id1495;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	874288	875292	.	+	.	ID=gene743;Name=YE0748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0748
AM286415.1	EMBL	CDS	874288	875292	.	+	0	ID=cds707;Parent=gene743;Dbxref=EnsemblGenomes-Gn:YE0748,EnsemblGenomes-Tr:CAL10852,GOA:A1JJR5,InterPro:IPR002525,InterPro:IPR003346,UniProtKB/TrEMBL:A1JJR5,NCBI_GP:CAL10852.1;Name=CAL10852.1;Note=Previously sequenced as Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 1.7e-131%2C 98.8 38d in 334 aa. Also similar to Shigella flexneri 2A IS1328 transposase SWALL:Q93EZ2 (EMBL:AF326777) (334 aa) fasta scores: E(): 8e-98%2C 73.78 id in 328 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=transposase for insertion sequence element IS1328;protein_id=CAL10852.1;transl_table=11
AM286415.1	EMBL	sequence_feature	874480	874758	.	+	.	ID=id1496;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 20.1%2C E-value 8.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	sequence_feature	874840	875178	.	+	.	ID=id1497;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 165.2%2CE-value 7e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	INVERTED	875550	875569	.	+	.	ID=id1498;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	875707	876336	.	+	.	ID=gene744;Name=YE0749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0749
AM286415.1	EMBL	CDS	875707	876336	.	+	0	ID=cds708;Parent=gene744;Dbxref=EnsemblGenomes-Gn:YE0749,EnsemblGenomes-Tr:CAL10853,UniProtKB/TrEMBL:A1JJR6,NCBI_GP:CAL10853.1;Name=CAL10853.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10853.1;transl_table=11
AM286415.1	EMBL	gene	876504	877382	.	+	.	ID=gene745;Name=YE0750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0750
AM286415.1	EMBL	CDS	876504	877382	.	+	0	ID=cds709;Parent=gene745;Dbxref=EnsemblGenomes-Gn:YE0750,EnsemblGenomes-Tr:CAL10854,UniProtKB/TrEMBL:A1JJR7,NCBI_GP:CAL10854.1;Name=CAL10854.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10854.1;transl_table=11
AM286415.1	EMBL	gene	877460	877783	.	+	.	ID=gene746;Name=YE0751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0751
AM286415.1	EMBL	CDS	877460	877783	.	+	0	ID=cds710;Parent=gene746;Dbxref=EnsemblGenomes-Gn:YE0751,EnsemblGenomes-Tr:CAL10855,UniProtKB/TrEMBL:A1JJR8,NCBI_GP:CAL10855.1;Name=CAL10855.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10855.1;transl_table=11
AM286415.1	EMBL	gene	877988	878512	.	+	.	ID=gene747;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=YE0752
AM286415.1	EMBL	CDS	877988	878512	.	+	0	ID=cds711;Parent=gene747;Dbxref=EnsemblGenomes-Gn:YE0752,EnsemblGenomes-Tr:CAL10856,GOA:A1JJR9,InterPro:IPR001424,InterPro:IPR018152,UniProtKB/TrEMBL:A1JJR9,NCBI_GP:CAL10856.1;Name=CAL10856.1;Note=Similar to many including: Salmonella typhimurium superoxide dismutase [cu-zn] 2 precursor SodC or Stm1440 SWALL:SODC_SALTY (SWALL:O68901) (177 aa) fasta scores: E(): 1.8e-45%2C 71.59 38d in 169 aa and to Brucella melitensis superoxide dismutase [cu-zn] precursor SodC or Bmeii0581 SWALL:SODC_BRUME (SWALL:P58645) (174 aa) fasta scores: E(): 4e-36%2C 57.47 38d in 174 aa;gbkey=CDS;gene=sodC;inference=similar to sequence:UniProtKB:P58645;product=superoxide dismutase [cu-zn];protein_id=CAL10856.1;transl_table=11
AM286415.1	EMBL	sequence_feature	878057	878509	.	+	.	ID=id1499;Note=Pfam match to entry PF00080 sodcu%2C Copper/zinc superoxide dismutase (SODC)%2C score 182.3%2C E-value 5.2e-52;gbkey=misc_feature;gene=sodC;inference=protein motif:PFAM:PF00080
AM286415.1	EMBL	sequence_feature	878180	878212	.	+	.	ID=id1500;Note=PS00087 Copper/Zinc superoxide dismutase signature 1.;gbkey=misc_feature;gene=sodC;inference=protein motif:Prosite:PS00087
AM286415.1	EMBL	sequence_feature	878471	878506	.	+	.	ID=id1501;Note=PS00332 Copper/Zinc superoxide dismutase signature 2.;gbkey=misc_feature;gene=sodC;inference=protein motif:Prosite:PS00332
AM286415.1	EMBL	gene	878616	879287	.	+	.	ID=gene748;Name=YE0753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0753
AM286415.1	EMBL	CDS	878616	879287	.	+	0	ID=cds712;Parent=gene748;Dbxref=EnsemblGenomes-Gn:YE0753,EnsemblGenomes-Tr:CAL10857,GOA:A1JJS0,InterPro:IPR007197,InterPro:IPR013785,InterPro:IPR024924,InterPro:IPR027609,UniProtKB/TrEMBL:A1JJS0,NCBI_GP:CAL10857.1;Name=CAL10857.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10857.1;transl_table=11
AM286415.1	EMBL	sequence_feature	878622	878732	.	+	.	ID=id1502;Note=Pfam match to entry PF02143 Radical_activat%2CRadical activating enzyme%2C score 40.2%2C E-value 3.1e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF02143
AM286415.1	EMBL	gene	879523	879882	.	-	.	ID=gene749;Name=ygcM;gbkey=Gene;gene=ygcM;gene_biotype=protein_coding;locus_tag=YE0754
AM286415.1	EMBL	CDS	879523	879882	.	-	0	ID=cds713;Parent=gene749;Dbxref=EnsemblGenomes-Gn:YE0754,EnsemblGenomes-Tr:CAL10858,GOA:A1JJS1,InterPro:IPR007115,UniProtKB/TrEMBL:A1JJS1,NCBI_GP:CAL10858.1;Name=CAL10858.1;gbkey=CDS;gene=ygcM;product=putative 6-pyruvoyl tetrahydrobiopterin synthase family protein;protein_id=CAL10858.1;transl_table=11
AM286415.1	EMBL	sequence_feature	879526	879882	.	-	.	ID=id1503;Note=Pfam match to entry PF01242 PTPS%2C 6-pyruvoyl tetrahydropterin synthase%2C score 234.9%2C E-value 7.3e-68;gbkey=misc_feature;gene=ygcM;inference=protein motif:PFAM:PF01242
AM286415.1	EMBL	gene	880250	882055	.	+	.	ID=gene750;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=YE0755
AM286415.1	EMBL	CDS	880250	882055	.	+	0	ID=cds714;Parent=gene750;Dbxref=EnsemblGenomes-Gn:YE0755,EnsemblGenomes-Tr:CAL10859,GOA:A1JJS2,InterPro:IPR001094,InterPro:IPR001433,InterPro:IPR001709,InterPro:IPR003097,InterPro:IPR008254,InterPro:IPR010199,InterPro:IPR017927,InterPro:IPR017938,InterPro:IPR023173,InterPro:IPR029039,InterPro:IPR029758,NCBI_GP:CAL10859.1;Name=CAL10859.1;gbkey=CDS;gene=cysJ;product=sulfite reductase [NADPH] flavoprotein alpha-component;protein_id=CAL10859.1;transl_table=11
AM286415.1	EMBL	sequence_feature	880436	880864	.	+	.	ID=id1504;Note=Pfam match to entry PF00258 flavodoxin%2C Flavodoxin%2C score 146.9%2C E-value 2.4e-41;gbkey=misc_feature;gene=cysJ;inference=protein motif:PFAM:PF00258
AM286415.1	EMBL	sequence_feature	880940	881527	.	+	.	ID=id1505;Note=Pfam match to entry PF00667 FAD_binding_1%2C FAD binding domain%2C score 197.5%2C E-value 1.4e-56;gbkey=misc_feature;gene=cysJ;inference=protein motif:PFAM:PF00667
AM286415.1	EMBL	sequence_feature	881609	881950	.	+	.	ID=id1506;Note=Pfam match to entry PF00175 NAD_binding_1%2COxidoreductase NAD-binding domain%2C score 148.2%2C E-value 9.5e-42;gbkey=misc_feature;gene=cysJ;inference=protein motif:PFAM:PF00175
AM286415.1	EMBL	gene	882055	883785	.	+	.	ID=gene751;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=YE0756
AM286415.1	EMBL	CDS	882055	883785	.	+	0	ID=cds715;Parent=gene751;Dbxref=EnsemblGenomes-Gn:YE0756,EnsemblGenomes-Tr:CAL10860,GOA:A1JJS3,InterPro:IPR005117,InterPro:IPR006066,InterPro:IPR006067,InterPro:IPR011786,NCBI_GP:CAL10860.1;Name=CAL10860.1;gbkey=CDS;gene=cysI;product=sulfite reductase [NADPH] hemoprotein beta-component;protein_id=CAL10860.1;transl_table=11
AM286415.1	EMBL	sequence_feature	882262	882474	.	+	.	ID=id1507;Note=Pfam match to entry PF03460 NIR_SIR_ferr%2CNitrite/Sulfite reductase ferredoxin-like half domain %2Cscore 81.2%2C E-value 1.4e-21;gbkey=misc_feature;gene=cysI;inference=protein motif:PFAM:PF03460
AM286415.1	EMBL	sequence_feature	883090	883308	.	+	.	ID=id1508;Note=Pfam match to entry PF03460 NIR_SIR_ferr%2CNitrite/Sulfite reductase ferredoxin-like half domain %2Cscore 75.3%2C E-value 8.1e-20;gbkey=misc_feature;gene=cysI;inference=protein motif:PFAM:PF03460
AM286415.1	EMBL	sequence_feature	883342	883551	.	+	.	ID=id1509;Note=Pfam match to entry PF01077 NIR_SIR%2C Nitrite and sulphite reductase 4Fe-4S domain%2C score 111.8%2C E-value 8.3e-31;gbkey=misc_feature;gene=cysI;inference=protein motif:PFAM:PF01077
AM286415.1	EMBL	sequence_feature	883486	883536	.	+	.	ID=id1510;Note=PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site.;gbkey=misc_feature;gene=cysI;inference=protein motif:Prosite:PS00365
AM286415.1	EMBL	gene	883782	884516	.	+	.	ID=gene752;Name=cysH;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=YE0757
AM286415.1	EMBL	CDS	883782	884516	.	+	0	ID=cds716;Parent=gene752;Dbxref=EnsemblGenomes-Gn:YE0757,EnsemblGenomes-Tr:CAL10861,GOA:A1JJS4,InterPro:IPR002500,InterPro:IPR004511,InterPro:IPR011800,InterPro:IPR014729,NCBI_GP:CAL10861.1;Name=CAL10861.1;Note=Similar to many including: Escherichia coli phosphoadenosine phosphosulfate reductase CysH or b2762 SWALL:CYSH_ECOLI (SWALL:P17854) (243 aa) fasta scores: E(): 3.4e-81%2C 78.92 38d in 242 aa%2C and to Salmonella typhi phosphoadenosine phosphosulfate reductase CysH or Sty3074 SWALL:Q8Z460 (EMBL:AL627276) (244 aa) fasta scores: E(): 2.2e-84%2C 82.3 38d in 243 aa;gbkey=CDS;gene=cysH;inference=similar to sequence:UniProtKB:P17854;product=phosphoadenosine phosphosulfate reductase;protein_id=CAL10861.1;transl_table=11
AM286415.1	EMBL	sequence_feature	883926	884507	.	+	.	ID=id1511;Note=Pfam match to entry PF01507 PAPS_reduct%2CPhosphoadenosine phosphosulfate reductase family%2C score 282.2%2C E-value 4.3e-82;gbkey=misc_feature;gene=cysH;inference=protein motif:PFAM:PF01507
AM286415.1	EMBL	gene	884629	885036	.	-	.	ID=gene753;Name=YE0758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0758
AM286415.1	EMBL	CDS	884629	885036	.	-	0	ID=cds717;Parent=gene753;Dbxref=EnsemblGenomes-Gn:YE0758,EnsemblGenomes-Tr:CAL10862,GOA:A1JJS5,InterPro:IPR005357,InterPro:IPR013321,UniProtKB/TrEMBL:A1JJS5,NCBI_GP:CAL10862.1;Name=CAL10862.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10862.1;transl_table=11
AM286415.1	EMBL	sequence_feature	884845	885036	.	-	.	ID=id1512;Note=Pfam match to entry PF03681 UPF0150%2CUncharacterised protein family (UPF0150)%2C score 41.9%2CE-value 9.5e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF03681
AM286415.1	EMBL	gene	885164	885364	.	-	.	ID=gene754;Name=YE0759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0759
AM286415.1	EMBL	CDS	885164	885364	.	-	0	ID=cds718;Parent=gene754;Dbxref=EnsemblGenomes-Gn:YE0759,EnsemblGenomes-Tr:CAL10863,GOA:A1JJS6,InterPro:IPR012933,InterPro:IPR015146,UniProtKB/TrEMBL:A1JJS6,NCBI_GP:CAL10863.1;Name=CAL10863.1;Note=Similar to Rhizobium meliloti hypothetical protein R02039 or Smc04441 SWALL:Q92K60 (EMBL:AL591789) (62 aa) fasta scores: E(): 0.00019%2C 36.92 38d in 65 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591789;product=conserved hypothetical protein;protein_id=CAL10863.1;transl_table=11
AM286415.1	EMBL	gene	885551	886585	.	-	.	ID=gene755;Name=YE0760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0760
AM286415.1	EMBL	CDS	885551	886585	.	-	0	ID=cds719;Parent=gene755;Dbxref=EnsemblGenomes-Gn:YE0760,EnsemblGenomes-Tr:CAL10864,InterPro:IPR007484,UniProtKB/TrEMBL:A1JJS7,NCBI_GP:CAL10864.1;Name=CAL10864.1;Note=Similar to many peptidases including: Escherichia coli alkaline phosphatase isozyme conversion protein precursor Iap or B2753 SWALL:IAP_ECOLI (SWALL:P10423) (345 aa) fasta scores: E(): 2.7e-68%2C 53.84 38d in 351 aa and to Salmonella typhimurium aminopeptidase in alkaline phosphatase isozyme conversion Iap or Stm2936 SWALL:Q8ZMF4 (EMBL:AE008834) (348 aa) fasta scores: E(): 1.1e-70%2C55.55 38d in 342 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P10423;product=peptidase;protein_id=CAL10864.1;transl_table=11
AM286415.1	EMBL	sequence_feature	886004	886150	.	-	.	ID=id1513;Note=Pfam match to entry PF01546 Peptidase_M20%2CPeptidase family M20/M25/M40%2C score 15.7%2C E-value 9.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01546
AM286415.1	EMBL	gene	886878	888296	.	+	.	ID=gene756;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YE0761
AM286415.1	EMBL	CDS	886878	888296	.	+	0	ID=cds720;Parent=gene756;Dbxref=EnsemblGenomes-Gn:YE0761,EnsemblGenomes-Tr:CAL10865,GOA:A1JJS8,InterPro:IPR000878,InterPro:IPR003043,InterPro:IPR006366,InterPro:IPR006367,InterPro:IPR012409,InterPro:IPR014776,InterPro:IPR014777,InterPro:IPR016040,InterPro:IPR019478,NCBI_GP:CAL10865.1;Name=CAL10865.1;gbkey=CDS;gene=cysG;product=siroheme synthase;protein_id=CAL10865.1;transl_table=11
AM286415.1	EMBL	sequence_feature	887523	888158	.	+	.	ID=id1514;Note=Pfam match to entry PF00590 TP_methylase%2CTetrapyrrole (Corrin/Porphyrin) Methylases%2C score 317.8%2CE-value 8.1e-93;gbkey=misc_feature;gene=cysG;inference=protein motif:PFAM:PF00590
AM286415.1	EMBL	sequence_feature	887535	887579	.	+	.	ID=id1515;Note=PS00839 Uroporphyrin-III C-methyltransferase signature 1.;gbkey=misc_feature;gene=cysG;inference=protein motif:Prosite:PS00839
AM286415.1	EMBL	sequence_feature	887760	887861	.	+	.	ID=id1516;Note=PS00840 Uroporphyrin-III C-methyltransferase signature 2.;gbkey=misc_feature;gene=cysG;inference=protein motif:Prosite:PS00840
AM286415.1	EMBL	gene	888307	889215	.	+	.	ID=gene757;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=YE0762
AM286415.1	EMBL	CDS	888307	889215	.	+	0	ID=cds721;Parent=gene757;Dbxref=EnsemblGenomes-Gn:YE0762,EnsemblGenomes-Tr:CAL10866,GOA:A1JJS9,InterPro:IPR002500,InterPro:IPR011784,InterPro:IPR014729,NCBI_GP:CAL10866.1;Name=CAL10866.1;gbkey=CDS;gene=cysD;product=sulfate adenylyltransferase subunit 2;protein_id=CAL10866.1;transl_table=11
AM286415.1	EMBL	sequence_feature	888397	889047	.	+	.	ID=id1517;Note=Pfam match to entry PF01507 PAPS_reduct%2CPhosphoadenosine phosphosulfate reductase family%2C score 324.6%2C E-value 7.5e-95;gbkey=misc_feature;gene=cysD;inference=protein motif:PFAM:PF01507
AM286415.1	EMBL	gene	889289	890725	.	+	.	ID=gene758;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=YE0763
AM286415.1	EMBL	CDS	889289	890725	.	+	0	ID=cds722;Parent=gene758;Dbxref=EnsemblGenomes-Gn:YE0763,EnsemblGenomes-Tr:CAL10867,GOA:A1JJT0,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009001,InterPro:IPR011779,InterPro:IPR027417,NCBI_GP:CAL10867.1;Name=CAL10867.1;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=CAL10867.1;transl_table=11
AM286415.1	EMBL	sequence_feature	889370	890014	.	+	.	ID=id1518;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu GTP binding domain%2C score 242.5%2C E-value 3.9e-70;gbkey=misc_feature;gene=cysN;inference=protein motif:PFAM:PF00009
AM286415.1	EMBL	sequence_feature	889397	889420	.	+	.	ID=id1519;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=cysN;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	889544	889591	.	+	.	ID=id1520;Note=PS00301 GTP-binding elongation factors signature.;gbkey=misc_feature;gene=cysN;inference=protein motif:Prosite:PS00301
AM286415.1	EMBL	sequence_feature	890048	890272	.	+	.	ID=id1521;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 43.4%2C E-value 3.2e-10;gbkey=misc_feature;gene=cysN;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	gene	890811	891377	.	+	.	ID=gene759;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=YE0764
AM286415.1	EMBL	CDS	890811	891377	.	+	0	ID=cds723;Parent=gene759;Dbxref=EnsemblGenomes-Gn:YE0764,EnsemblGenomes-Tr:CAL10868,GOA:A1JJT1,InterPro:IPR002891,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJT1,NCBI_GP:CAL10868.1;Name=CAL10868.1;gbkey=CDS;gene=cysC;product=adenylylsulfate kinase;protein_id=CAL10868.1;transl_table=11
AM286415.1	EMBL	sequence_feature	890850	891317	.	+	.	ID=id1522;Note=Pfam match to entry PF01583 APS_kinase%2CAdenylylsulfate kinase%2C score 385.5%2C E-value 3.5e-113;gbkey=misc_feature;gene=cysC;inference=protein motif:PFAM:PF01583
AM286415.1	EMBL	sequence_feature	890874	890897	.	+	.	ID=id1523;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=cysC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	891572	891889	.	+	.	ID=gene760;Name=ygbE;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=YE0766
AM286415.1	EMBL	CDS	891572	891889	.	+	0	ID=cds724;Parent=gene760;Dbxref=EnsemblGenomes-Gn:YE0766,EnsemblGenomes-Tr:CAL10869,InterPro:IPR022721,UniProtKB/TrEMBL:A1JJT2,NCBI_GP:CAL10869.1;Name=CAL10869.1;gbkey=CDS;gene=ygbE;product=putative membrane protein;protein_id=CAL10869.1;transl_table=11
AM286415.1	EMBL	sequence_feature	891632	891700	.	+	.	ID=id1524;Note=3 probable transmembrane helices predicted for YE0766 by TMHMM2.0 at aa 21-43%2C 53-75 and 80-102;gbkey=misc_feature;gene=ygbE;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	891728	891796	.	+	.	ID=id1524;Note=3 probable transmembrane helices predicted for YE0766 by TMHMM2.0 at aa 21-43%2C 53-75 and 80-102;gbkey=misc_feature;gene=ygbE;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	891809	891877	.	+	.	ID=id1524;Note=3 probable transmembrane helices predicted for YE0766 by TMHMM2.0 at aa 21-43%2C 53-75 and 80-102;gbkey=misc_feature;gene=ygbE;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	892316	892639	.	+	.	ID=gene761;Name=YE0768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0768
AM286415.1	EMBL	CDS	892316	892639	.	+	0	ID=cds725;Parent=gene761;Dbxref=EnsemblGenomes-Gn:YE0768,EnsemblGenomes-Tr:CAL10870,GOA:A1JJT3,InterPro:IPR007060,InterPro:IPR023081,NCBI_GP:CAL10870.1;Name=CAL10870.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10870.1;transl_table=11
AM286415.1	EMBL	gene	892757	893401	.	+	.	ID=gene762;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;gene_synonym=b2747;locus_tag=YE0769
AM286415.1	EMBL	CDS	892757	893401	.	+	0	ID=cds726;Parent=gene762;Dbxref=EnsemblGenomes-Gn:YE0769,EnsemblGenomes-Tr:CAL10871,GOA:A1JJT4,InterPro:IPR001228,InterPro:IPR018294,InterPro:IPR029044,UniProtKB/TrEMBL:A1JJT4,NCBI_GP:CAL10871.1;Name=CAL10871.1;gbkey=CDS;gene=ispD;product=4-diphosphocytidyl-2C-methyl-D-erythritol synthase;protein_id=CAL10871.1;transl_table=11
AM286415.1	EMBL	sequence_feature	892757	893383	.	+	.	ID=id1525;Note=Pfam match to entry PF01128 IspD%2C Uncharacterized protein family UPF0007%2C score 339.4%2C E-value 2.7e-99;gbkey=misc_feature;gene=ispD;inference=protein motif:PFAM:PF01128
AM286415.1	EMBL	sequence_feature	893000	893023	.	+	.	ID=id1526;Note=PS01295 Uncharacterized protein family UPF0007 signature.;gbkey=misc_feature;gene=ispD;inference=protein motif:Prosite:PS01295
AM286415.1	EMBL	gene	893416	893904	.	+	.	ID=gene763;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;gene_synonym=b2746,mecS;locus_tag=YE0770
AM286415.1	EMBL	CDS	893416	893904	.	+	0	ID=cds727;Parent=gene763;Dbxref=EnsemblGenomes-Gn:YE0770,EnsemblGenomes-Tr:CAL10872,GOA:A1JJT5,InterPro:IPR003526,InterPro:IPR020555,NCBI_GP:CAL10872.1;Name=CAL10872.1;gbkey=CDS;gene=ispF;product=2C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=CAL10872.1;transl_table=11
AM286415.1	EMBL	sequence_feature	893416	893892	.	+	.	ID=id1527;Note=Pfam match to entry PF02542 YgbB%2C YgbB family %2Cscore 335.1%2C E-value 5.1e-98;gbkey=misc_feature;gene=ispF;inference=protein motif:PFAM:PF02542
AM286415.1	EMBL	gene	893915	894964	.	+	.	ID=gene764;Name=YE0771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0771
AM286415.1	EMBL	CDS	893915	894964	.	+	0	ID=cds728;Parent=gene764;Dbxref=EnsemblGenomes-Gn:YE0771,EnsemblGenomes-Tr:CAL10873,GOA:A1JJT6,InterPro:IPR001656,InterPro:IPR011760,InterPro:IPR020103,InterPro:IPR020119,NCBI_GP:CAL10873.1;Name=CAL10873.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10873.1;transl_table=11
AM286415.1	EMBL	sequence_feature	893915	894940	.	+	.	ID=id1528;Note=Pfam match to entry PF01142 UPF0024%2CUncharacterized protein family UPF0024%2C score 367.4%2CE-value 9.8e-108;gbkey=misc_feature;inference=protein motif:PFAM:PF01142
AM286415.1	EMBL	sequence_feature	894140	894181	.	+	.	ID=id1529;Note=PS01268 Uncharacterized protein family UPF0024 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01268
AM286415.1	EMBL	gene	894942	895694	.	+	.	ID=gene765;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=YE0772
AM286415.1	EMBL	CDS	894942	895694	.	+	0	ID=cds729;Parent=gene765;Dbxref=EnsemblGenomes-Gn:YE0772,EnsemblGenomes-Tr:CAL10874,GOA:A1JJT7,InterPro:IPR002828,NCBI_GP:CAL10874.1;Name=CAL10874.1;gbkey=CDS;gene=surE;product=stationary-phase survival protein;protein_id=CAL10874.1;transl_table=11
AM286415.1	EMBL	sequence_feature	894945	895499	.	+	.	ID=id1530;Note=Pfam match to entry PF01975 SurE%2C Survival protein SurE%2C score 345.8%2C E-value 3e-101;gbkey=misc_feature;gene=surE;inference=protein motif:PFAM:PF01975
AM286415.1	EMBL	gene	895716	896342	.	+	.	ID=gene766;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=YE0773
AM286415.1	EMBL	CDS	895716	896342	.	+	0	ID=cds730;Parent=gene766;Dbxref=EnsemblGenomes-Gn:YE0773,EnsemblGenomes-Tr:CAL10875,GOA:A1JJT8,InterPro:IPR000682,InterPro:IPR029063,NCBI_GP:CAL10875.1;Name=CAL10875.1;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=CAL10875.1;transl_table=11
AM286415.1	EMBL	sequence_feature	895725	896336	.	+	.	ID=id1531;Note=Pfam match to entry PF01135 PCMT%2CProtein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)%2C score 377.7%2C E-value 7.7e-111;gbkey=misc_feature;gene=pcm;inference=protein motif:PFAM:PF01135
AM286415.1	EMBL	sequence_feature	896013	896042	.	+	.	ID=id1532;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=pcm;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	896518	897501	.	+	.	ID=gene767;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=YE0774
AM286415.1	EMBL	CDS	896518	897501	.	+	0	ID=cds731;Parent=gene767;Dbxref=EnsemblGenomes-Gn:YE0774,EnsemblGenomes-Tr:CAL10876,InterPro:IPR011055,InterPro:IPR016047,InterPro:IPR018392,UniProtKB/TrEMBL:A1JJT9,NCBI_GP:CAL10876.1;Name=CAL10876.1;gbkey=CDS;gene=nlpD;product=lipoprotein;protein_id=CAL10876.1;transl_table=11
AM286415.1	EMBL	sequence_feature	896563	896595	.	+	.	ID=id1533;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nlpD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	896752	896883	.	+	.	ID=id1534;Note=Pfam match to entry PF01476 LysM%2C LysM domain %2Cscore 47.9%2C E-value 1.5e-11;gbkey=misc_feature;gene=nlpD;inference=protein motif:PFAM:PF01476
AM286415.1	EMBL	sequence_feature	897238	897486	.	+	.	ID=id1535;Note=Pfam match to entry PF01551 Peptidase_M37%2CPeptidase family M23/M37%2C score 151.0%2C E-value 1.3e-42;gbkey=misc_feature;gene=nlpD;inference=protein motif:PFAM:PF01551
AM286415.1	EMBL	gene	897556	898554	.	+	.	ID=gene768;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;gene_synonym=appR,katF,nur,otsX,sigS;locus_tag=YE0775
AM286415.1	EMBL	CDS	897556	898554	.	+	0	ID=cds732;Parent=gene768;Dbxref=EnsemblGenomes-Gn:YE0775,EnsemblGenomes-Tr:CAL10877,GOA:A1JJU0,InterPro:IPR000943,InterPro:IPR007624,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR009042,InterPro:IPR011991,InterPro:IPR012761,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,UniProtKB/TrEMBL:A1JJU0,NCBI_GP:CAL10877.1;Name=CAL10877.1;gbkey=CDS;gene=rpoS;product=RNA polymerase sigma factor RpoS;protein_id=CAL10877.1;transl_table=11
AM286415.1	EMBL	sequence_feature	897724	897834	.	+	.	ID=id1536;Note=Pfam match to entry PF00140 sigma70_r1_2%2C Sigma-70 factor%2C region 1.2%2C score 49.0%2C E-value 7e-12;gbkey=misc_feature;gene=rpoS;inference=protein motif:PFAM:PF00140
AM286415.1	EMBL	sequence_feature	897913	897954	.	+	.	ID=id1537;Note=PS00715 Sigma-70 factors family signature 1.;gbkey=misc_feature;gene=rpoS;inference=protein motif:Prosite:PS00715
AM286415.1	EMBL	sequence_feature	898417	898482	.	+	.	ID=id1538;Note=Predicted helix-turn-helix motif with score 1306.000%2C SD 3.64 at aa 288-309%2C sequence ATLEDVGREIGLTRERVRQIQV;gbkey=misc_feature;gene=rpoS
AM286415.1	EMBL	sequence_feature	898420	898500	.	+	.	ID=id1539;Note=PS00716 Sigma-70 factors family signature 2.;gbkey=misc_feature;gene=rpoS;inference=protein motif:Prosite:PS00716
AM286415.1	EMBL	gene	898643	901198	.	-	.	ID=gene769;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;gene_synonym=fdv;locus_tag=YE0776
AM286415.1	EMBL	CDS	898643	901198	.	-	0	ID=cds733;Parent=gene769;Dbxref=EnsemblGenomes-Gn:YE0776,EnsemblGenomes-Tr:CAL10878,GOA:A1JJU1,InterPro:IPR000432,InterPro:IPR005748,InterPro:IPR007695,InterPro:IPR007696,InterPro:IPR007860,InterPro:IPR007861,InterPro:IPR016151,InterPro:IPR027417,NCBI_GP:CAL10878.1;Name=CAL10878.1;gbkey=CDS;gene=mutS;product=DNA mismatch repair protein MutS;protein_id=CAL10878.1;transl_table=11
AM286415.1	EMBL	sequence_feature	898832	899554	.	-	.	ID=id1540;Note=Pfam match to entry PF00488 MutS_C%2C DNA mismatch repair proteins%2C mutS family%2C score 579.4%2C E-value 1.5e-171;gbkey=misc_feature;gene=mutS;inference=protein motif:PFAM:PF00488
AM286415.1	EMBL	sequence_feature	899087	899137	.	-	.	ID=id1541;Note=PS00486 DNA mismatch repair proteins mutS family signature.;gbkey=misc_feature;gene=mutS;inference=protein motif:Prosite:PS00486
AM286415.1	EMBL	sequence_feature	899336	899359	.	-	.	ID=id1542;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=mutS;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	899780	901162	.	-	.	ID=id1543;Note=Pfam match to entry PF01624 MutS_N%2C MutS family%2CN-terminal putative DNA binding domain%2C score 738.4%2CE-value 2e-219;gbkey=misc_feature;gene=mutS;inference=protein motif:PFAM:PF01624
AM286415.1	EMBL	sequence_feature	900755	900778	.	-	.	ID=id1544;Note=PS00030 Eukaryotic putative RNA-binding region RNP-1 signature.;gbkey=misc_feature;gene=mutS;inference=protein motif:Prosite:PS00030
AM286415.1	EMBL	gene	901357	903021	.	-	.	ID=gene770;Name=YE0777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0777
AM286415.1	EMBL	CDS	901357	903021	.	-	0	ID=cds734;Parent=gene770;Dbxref=EnsemblGenomes-Gn:YE0777,EnsemblGenomes-Tr:CAL10879,InterPro:IPR021797,UniProtKB/TrEMBL:A1JJU2,NCBI_GP:CAL10879.1;Name=CAL10879.1;Note=Similar to Aeromonas hydrophila hypothetical protein SWALL:AAM22558 (EMBL:AF343089) (571 aa) fasta scores: E(): 7.3e-35%2C 30.51 38d in 544 aa and Vibrio cholerae hypothetical protein Vc0393 SWALL:Q9KUW6 (EMBL:AE004127) (597 aa) fasta scores: E(): 2e-18%2C 30.36 id in 573 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF343089;product=putative inner membrane protein;protein_id=CAL10879.1;transl_table=11
AM286415.1	EMBL	sequence_feature	902914	902970	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	902818	902871	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	902722	902781	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	902644	902712	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	902542	902610	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	902431	902499	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	902353	902412	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	902290	902343	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	902203	902271	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	901942	902010	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	901849	901917	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	901678	901746	.	-	.	ID=id1545;Note=12 probable transmembrane helices predicted for YE0777 by TMHMM2.0 at aa 30-48%2C 63-80%2C 93-112%2C 116-138%2C150-172%2C 187-209%2C 216-235%2C 239-256%2C 263-285%2C 350-372%2C381-403 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	903126	903389	.	-	.	ID=gene771;Name=YE0778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0778
AM286415.1	EMBL	CDS	903126	903389	.	-	0	ID=cds735;Parent=gene771;Dbxref=EnsemblGenomes-Gn:YE0778,EnsemblGenomes-Tr:CAL10880,GOA:A1JJU3,InterPro:IPR006793,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJU3,NCBI_GP:CAL10880.1;Name=CAL10880.1;Note=Note the differing N-terminus compared to the other Yersinia orthologues;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10880.1;transl_table=11
AM286415.1	EMBL	gene	904320	904844	.	+	.	ID=gene772;Name=mrpA;gbkey=Gene;gene=mrpA;gene_biotype=protein_coding;gene_synonym=smfA;locus_tag=YE0779
AM286415.1	EMBL	CDS	904320	904844	.	+	0	ID=cds736;Parent=gene772;Dbxref=EnsemblGenomes-Gn:YE0779,EnsemblGenomes-Tr:CAL10881,GOA:A1JJU4,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JJU4,NCBI_GP:CAL10881.1;Name=CAL10881.1;gbkey=CDS;gene=mrpA;product=putative mannose-resistant/Proteus-like fimbrial protein;protein_id=CAL10881.1;transl_table=11
AM286415.1	EMBL	sequence_feature	904401	904841	.	+	.	ID=id1546;Note=Pfam match to entry PF00419 Fimbrial%2C Fimbrial protein%2C score 165.5%2C E-value 5.7e-47;gbkey=misc_feature;gene=mrpA;inference=protein motif:PFAM:PF00419
AM286415.1	EMBL	sequence_feature	904500	904523	.	+	.	ID=id1547;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=mrpA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	904929	905474	.	+	.	ID=gene773;Name=mrfB;gbkey=Gene;gene=mrfB;gene_biotype=protein_coding;locus_tag=YE0780
AM286415.1	EMBL	CDS	904929	905474	.	+	0	ID=cds737;Parent=gene773;Dbxref=EnsemblGenomes-Gn:YE0780,EnsemblGenomes-Tr:CAL10882,GOA:A1JJU5,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JJU5,NCBI_GP:CAL10882.1;Name=CAL10882.1;Note=Similar to Escherichia coli PRS fimbrial minor pilin protein precursor PrsH SWALL:PRSH_ECOLI (SWALL:P42185) (195 aa) fasta scores: E(): 8.7e-14%2C 35.94 id in 153 aa%2C and to Photorhabdus luminescens MrfB SWALL:Q93MT5 (EMBL:AF396083) (183 aa) fasta scores: E(): 8.8e-28%2C 45.35 38d in 183 aa;gbkey=CDS;gene=mrfB;inference=similar to sequence:UniProtKB:P42185;product=exported minor pilin protein;protein_id=CAL10882.1;transl_table=11
AM286415.1	EMBL	sequence_feature	905025	905471	.	+	.	ID=id1548;Note=Pfam match to entry PF00419 Fimbrial%2C Fimbrial protein%2C score 68.7%2C E-value 7.8e-18;gbkey=misc_feature;gene=mrfB;inference=protein motif:PFAM:PF00419
AM286415.1	EMBL	gene	905480	908041	.	+	.	ID=gene774;Name=mrfC;gbkey=Gene;gene=mrfC;gene_biotype=protein_coding;locus_tag=YE0781
AM286415.1	EMBL	CDS	905480	908041	.	+	0	ID=cds738;Parent=gene774;Dbxref=EnsemblGenomes-Gn:YE0781,EnsemblGenomes-Tr:CAL10883,GOA:A1JJU6,InterPro:IPR000015,InterPro:IPR018030,InterPro:IPR025885,InterPro:IPR025949,UniProtKB/TrEMBL:A1JJU6,NCBI_GP:CAL10883.1;Name=CAL10883.1;gbkey=CDS;gene=mrfC;product=fimbrial outer membrane usher protein;protein_id=CAL10883.1;transl_table=11
AM286415.1	EMBL	sequence_feature	905612	907960	.	+	.	ID=id1549;Note=Pfam match to entry PF00577 Usher%2C Fimbrial Usher protein%2C score 1116.0%2C E-value 0;gbkey=misc_feature;gene=mrfC;inference=protein motif:PFAM:PF00577
AM286415.1	EMBL	sequence_feature	906446	906478	.	+	.	ID=id1550;Note=PS01151 Fimbrial biogenesis outer membrane usher protein signature.;gbkey=misc_feature;gene=mrfC;inference=protein motif:Prosite:PS01151
AM286415.1	EMBL	gene	908141	908908	.	+	.	ID=gene775;Name=mrfD;gbkey=Gene;gene=mrfD;gene_biotype=protein_coding;locus_tag=YE0782
AM286415.1	EMBL	CDS	908141	908908	.	+	0	ID=cds739;Parent=gene775;Dbxref=EnsemblGenomes-Gn:YE0782,EnsemblGenomes-Tr:CAL10884,GOA:A1JJU7,InterPro:IPR001829,InterPro:IPR008962,InterPro:IPR016147,InterPro:IPR016148,InterPro:IPR018046,UniProtKB/TrEMBL:A1JJU7,NCBI_GP:CAL10884.1;Name=CAL10884.1;Note=Similar to Photorhabdus luminescens mannose resistant fimbriae MrfD SWALL:Q93MT3 (EMBL:AF396083) (249 aa) fasta scores: E(): 1.3e-67%2C 69.91 38d in 246 aa%2C and to Escherichia coli chaperone protein PapD precursor papD SWALL:PAPD_ECOLI (SWALL:P15319) (239 aa) fasta scores: E(): 6.6e-42%2C 48.1 38d in 237 aa;gbkey=CDS;gene=mrfD;inference=similar to sequence:UniProtKB:P15319;product=pili chaperone protein;protein_id=CAL10884.1;transl_table=11
AM286415.1	EMBL	sequence_feature	908462	908515	.	+	.	ID=id1551;Note=PS00635 Gram-negative pili assembly chaperone signature.;gbkey=misc_feature;gene=mrfD;inference=protein motif:Prosite:PS00635
AM286415.1	EMBL	sequence_feature	908468	908593	.	+	.	ID=id1552;Note=Pfam match to entry PF00345 pili_assembly%2CGram-negative pili assembly chaperone%2C N-terminal domain %2Cscore 67.2%2C E-value 2e-19;gbkey=misc_feature;gene=mrfD;inference=protein motif:PFAM:PF00345
AM286415.1	EMBL	sequence_feature	908615	908887	.	+	.	ID=id1553;Note=Pfam match to entry PF02753 pili_assembly_C%2CGram-negative pili assembly chaperone%2C C-terminal domain %2Cscore 36.4%2C E-value 4.3e-08;gbkey=misc_feature;gene=mrfD;inference=protein motif:PFAM:PF02753
AM286415.1	EMBL	gene	908962	909498	.	+	.	ID=gene776;Name=mrfF;gbkey=Gene;gene=mrfF;gene_biotype=protein_coding;locus_tag=YE0783
AM286415.1	EMBL	CDS	908962	909498	.	+	0	ID=cds740;Parent=gene776;Dbxref=EnsemblGenomes-Gn:YE0783,EnsemblGenomes-Tr:CAL10885,GOA:A1JJU8,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JJU8,NCBI_GP:CAL10885.1;Name=CAL10885.1;Note=Similar to Photorhabdus luminescens mannose resistant fimbriae protein%2C MrfF SWALL:Q93MT1 (EMBL:AF396083) (188 aa) fasta scores: E(): 7.3e-25%2C 49 id in 151 aa%2C and to Proteus mirabilis MrpE protein SWALL:Q51906 (EMBL:Z32686) (181 aa) fasta scores: E(): 1.4e-17%2C 39.25 38d in 135 aa;gbkey=CDS;gene=mrfF;inference=similar to sequence:INSDC:Z32686;product=exported pilin protein;protein_id=CAL10885.1;transl_table=11
AM286415.1	EMBL	sequence_feature	909004	909072	.	+	.	ID=id1554;Note=1 probable transmembrane helix predicted for YE0783 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;gene=mrfF;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	909498	909992	.	+	.	ID=gene777;Name=mrfG;gbkey=Gene;gene=mrfG;gene_biotype=protein_coding;locus_tag=YE0784
AM286415.1	EMBL	CDS	909498	909992	.	+	0	ID=cds741;Parent=gene777;Dbxref=EnsemblGenomes-Gn:YE0784,EnsemblGenomes-Tr:CAL10886,GOA:A1JJU9,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JJU9,NCBI_GP:CAL10886.1;Name=CAL10886.1;Note=Similar to Photorhabdus luminescens mannose resistant fimbriae protein MrfG SWALL:Q93MT0 (EMBL:AF396083) (163 aa) fasta scores: E(): 8e-25%2C 47.56 id in 164 aa%2C and to Salmonella typhimurium minor fimbrial subunit stff stff or stm0199 SWALL:O87661 (EMBL:AF093503) (158 aa) fasta scores: E(): 1.9e-24%2C 48.07 38d in 156 aa;gbkey=CDS;gene=mrfG;inference=similar to sequence:INSDC:AF396083;product=minor pili exported protein;protein_id=CAL10886.1;transl_table=11
AM286415.1	EMBL	sequence_feature	909576	909989	.	+	.	ID=id1555;Note=Pfam match to entry PF00419 Fimbrial%2C Fimbrial protein%2C score -18.7%2C E-value 8.2e-05;gbkey=misc_feature;gene=mrfG;inference=protein motif:PFAM:PF00419
AM286415.1	EMBL	gene	910002	910547	.	+	.	ID=gene778;Name=mrfH;gbkey=Gene;gene=mrfH;gene_biotype=protein_coding;locus_tag=YE0785
AM286415.1	EMBL	CDS	910002	910547	.	+	0	ID=cds742;Parent=gene778;Dbxref=EnsemblGenomes-Gn:YE0785,EnsemblGenomes-Tr:CAL10887,GOA:A1JJV0,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JJV0,NCBI_GP:CAL10887.1;Name=CAL10887.1;Note=Similar to Photorhabdus luminescens mannose resistant fimbriae protein%2C MrfH SWALL:Q93MS9 (EMBL:AF396083) (181 aa) fasta scores: E(): 6.7e-29%2C50.84 38d in 177 aa%2C and to Serratia marcescens fimbria a protein precursor smfA SWALL:FMA_SERMA (SWALL:P13421) (174 aa) fasta scores: E(): 6.8e-10%2C 28.65 38d in 178 aa;gbkey=CDS;gene=mrfH;inference=similar to sequence:UniProtKB:P13421;product=exported pilin protein;protein_id=CAL10887.1;transl_table=11
AM286415.1	EMBL	sequence_feature	910098	910544	.	+	.	ID=id1556;Note=Pfam match to entry PF00419 Fimbrial%2C Fimbrial protein%2C score 62.8%2C E-value 4.8e-16;gbkey=misc_feature;gene=mrfH;inference=protein motif:PFAM:PF00419
AM286415.1	EMBL	gene	910632	911459	.	+	.	ID=gene779;Name=mrfJ;gbkey=Gene;gene=mrfJ;gene_biotype=protein_coding;locus_tag=YE0786
AM286415.1	EMBL	CDS	910632	911459	.	+	0	ID=cds743;Parent=gene779;Dbxref=EnsemblGenomes-Gn:YE0786,EnsemblGenomes-Tr:CAL10888,UniProtKB/TrEMBL:A1JJV1,NCBI_GP:CAL10888.1;Name=CAL10888.1;Note=Similar to Photorhabdus luminescens mannose resistant fimbriae protein%2C MrfJ SWALL:Q93MS8 (EMBL:AF396083) (271 aa) fasta scores: E(): 1.7e-10%2C 27.3 id in 271 aa and Proteus mirabilis MrpH protein mrpH SWALL:Q9R6Q8 (EMBL:Z32686) (275 aa) fasta scores: E(): 2.2e-12%2C 26.43 38d in 261 aa;gbkey=CDS;gene=mrfJ;inference=similar to sequence:INSDC:Z32686;product=exported pilin protein;protein_id=CAL10888.1;transl_table=11
AM286415.1	EMBL	gene	911488	911667	.	+	.	ID=gene780;Name=YE0787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0787
AM286415.1	EMBL	CDS	911488	911667	.	+	0	ID=cds744;Parent=gene780;Dbxref=EnsemblGenomes-Gn:YE0787,EnsemblGenomes-Tr:CAL10889,UniProtKB/TrEMBL:A1JJV2,NCBI_GP:CAL10889.1;Name=CAL10889.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10889.1;transl_table=11
AM286415.1	EMBL	gene	911785	911973	.	+	.	ID=gene781;Name=YE0788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0788
AM286415.1	EMBL	CDS	911785	911973	.	+	0	ID=cds745;Parent=gene781;Dbxref=EnsemblGenomes-Gn:YE0788,EnsemblGenomes-Tr:CAL10890,UniProtKB/TrEMBL:A1JJV3,NCBI_GP:CAL10890.1;Name=CAL10890.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10890.1;transl_table=11
AM286415.1	EMBL	gene	912248	912874	.	+	.	ID=gene782;Name=YE0789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0789
AM286415.1	EMBL	CDS	912248	912874	.	+	0	ID=cds746;Parent=gene782;Dbxref=EnsemblGenomes-Gn:YE0789,EnsemblGenomes-Tr:CAL10891,GOA:A1JJV4,InterPro:IPR001853,InterPro:IPR012336,UniProtKB/TrEMBL:A1JJV4,NCBI_GP:CAL10891.1;Name=CAL10891.1;Note=Similar to Legionella pneumophila thiol:disulfide interchange protein DsbA precursor SWALL:DSBA_LEGPN (SWALL:P50024) (204 aa) fasta scores: E(): 1.6e-05%2C 21.07 id in 204 aa and Azotobacter vinelandii thiol:disulfide interchange protein DsbA precursor SWALL:DSBA_AZOVI (SWALL:Q44504) (214 aa) fasta scores: E(): 2.5e-05%2C 23.52 id in 136 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q44504;product=putative thiol:disulfide interchange protein;protein_id=CAL10891.1;transl_table=11
AM286415.1	EMBL	gene	912874	913830	.	+	.	ID=gene783;Name=YE0790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0790
AM286415.1	EMBL	CDS	912874	913830	.	+	0	ID=cds747;Parent=gene783;Dbxref=EnsemblGenomes-Gn:YE0790,EnsemblGenomes-Tr:CAL10892,GOA:A1JJV5,InterPro:IPR004960,UniProtKB/TrEMBL:A1JJV5,NCBI_GP:CAL10892.1;Name=CAL10892.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10892.1;transl_table=11
AM286415.1	EMBL	gene	913856	916006	.	+	.	ID=gene784;Name=YE0791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0791
AM286415.1	EMBL	CDS	913856	916006	.	+	0	ID=cds748;Parent=gene784;Dbxref=EnsemblGenomes-Gn:YE0791,EnsemblGenomes-Tr:CAL10893,GOA:A1JJV6,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005074,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJV6,NCBI_GP:CAL10893.1;Name=CAL10893.1;Note=Similar to Escherichia coli MtfB SWALL:Q46973 (EMBL:U47048) (707 aa) fasta scores: E(): 6.5e-39%2C 27.75 id in 717 aa and to Xylella fastidiosa colicin v secretion ABC transporter ATP-binding protein xf1220 SWALL:Q9PE08 (EMBL:AE003955) (707 aa) fasta scores: E(): 9.5e-39%2C29.58 38d in 720 aa;gbkey=CDS;inference=similar to sequence:INSDC:U47048;product=ABC transporter%2C ATP-binding component;protein_id=CAL10893.1;transl_table=11
AM286415.1	EMBL	sequence_feature	913913	914260	.	+	.	ID=id1557;Note=Pfam match to entry PF03412 Peptidase_C39%2CPeptidase C39 family%2C score 32.0%2C E-value 3.8e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF03412
AM286415.1	EMBL	sequence_feature	914354	915160	.	+	.	ID=id1558;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 15.5%2C E-value 6.9e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	914354	914422	.	+	.	ID=id1559;Note=5 probable transmembrane helices predicted for YE0791 by TMHMM2.0 at aa 149-171%2C 186-205%2C 212-229%2C284-306 and 371-393;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	914465	914524	.	+	.	ID=id1559;Note=5 probable transmembrane helices predicted for YE0791 by TMHMM2.0 at aa 149-171%2C 186-205%2C 212-229%2C284-306 and 371-393;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	914543	914596	.	+	.	ID=id1559;Note=5 probable transmembrane helices predicted for YE0791 by TMHMM2.0 at aa 149-171%2C 186-205%2C 212-229%2C284-306 and 371-393;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	914759	914827	.	+	.	ID=id1559;Note=5 probable transmembrane helices predicted for YE0791 by TMHMM2.0 at aa 149-171%2C 186-205%2C 212-229%2C284-306 and 371-393;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	915020	915088	.	+	.	ID=id1559;Note=5 probable transmembrane helices predicted for YE0791 by TMHMM2.0 at aa 149-171%2C 186-205%2C 212-229%2C284-306 and 371-393;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	915383	915943	.	+	.	ID=id1560;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 173.3%2C E-value 2.6e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	915404	915427	.	+	.	ID=id1561;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	915716	915760	.	+	.	ID=id1562;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	916006	917181	.	+	.	ID=gene785;Name=YE0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0792
AM286415.1	EMBL	CDS	916006	917181	.	+	0	ID=cds749;Parent=gene785;Dbxref=EnsemblGenomes-Gn:YE0792,EnsemblGenomes-Tr:CAL10894,GOA:A1JJV7,InterPro:IPR006143,UniProtKB/TrEMBL:A1JJV7,NCBI_GP:CAL10894.1;Name=CAL10894.1;Note=Similar to many type I secretion proteins: Yersinia pestis putative HlyD family secretion protein Ypo2999 SWALL:Q8ZCI8 (EMBL:AJ414154) (401 aa) fasta scores: E(): 9.2e-43%2C 39.84 38d in 374 aa and to Agrobacterium tumefaciens efflux protein atu5177 or agr_pat_244 SWALL:Q8UKE5 (EMBL:AE008940) (397 aa) fasta scores: E(): 6.9e-37%2C 39.58 38d in 336 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414154;product=putative type I secretion protein;protein_id=CAL10894.1;transl_table=11
AM286415.1	EMBL	sequence_feature	916042	916101	.	+	.	ID=id1563;Note=1 probable transmembrane helix predicted for YE0792 by TMHMM2.0 at aa 13-32;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	916198	916602	.	+	.	ID=id1564;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 46.2%2C E-value 2.2e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	gene	917171	919147	.	+	.	ID=gene786;Name=YE0793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0793
AM286415.1	EMBL	CDS	917171	919147	.	+	0	ID=cds750;Parent=gene786;Dbxref=EnsemblGenomes-Gn:YE0793,EnsemblGenomes-Tr:CAL10895,GOA:A1JJV8,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR003838,InterPro:IPR017871,InterPro:IPR025857,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJV8,NCBI_GP:CAL10895.1;Name=CAL10895.1;Note=Similar to many ABC-family membrane transport proteins including: Escherichia coli macrolide-specific ABC-type efflux carrier MacB or b0879 SWALL:MACB_ECOLI (SWALL:P75831) (648 aa) fasta scores: E(): 4.3e-99%2C 47.61 id in 649 aa and to Agrobacterium tumefaciens ABC transporter%2C nucleotide binding/ATPase protein Atu5178 or agr_pat_247 SWALL:Q8UKE4 (EMBL:AE008940) (648 aa) fasta scores: E(): 7.1e-100%2C 48.53 38d in 647 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75831;product=ABC transporter%2C ATP-binding component;protein_id=CAL10895.1;transl_table=11
AM286415.1	EMBL	sequence_feature	917306	917863	.	+	.	ID=id1565;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 181.3%2C E-value 1e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	917327	917350	.	+	.	ID=id1566;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	917639	917683	.	+	.	ID=id1567;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	918749	919123	.	+	.	ID=id1568;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score 145.2%2C E-value 7.7e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	sequence_feature	918770	918838	.	+	.	ID=id1569;Note=3 probable transmembrane helices predicted for YE0793 by TMHMM2.0 at aa 534-556%2C 586-608 and 618-640;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	918926	918994	.	+	.	ID=id1569;Note=3 probable transmembrane helices predicted for YE0793 by TMHMM2.0 at aa 534-556%2C 586-608 and 618-640;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	919022	919090	.	+	.	ID=id1569;Note=3 probable transmembrane helices predicted for YE0793 by TMHMM2.0 at aa 534-556%2C 586-608 and 618-640;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	919144	920550	.	+	.	ID=gene787;Name=YE0794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0794
AM286415.1	EMBL	CDS	919144	920550	.	+	0	ID=cds751;Parent=gene787;Dbxref=EnsemblGenomes-Gn:YE0794,EnsemblGenomes-Tr:CAL10896,GOA:A1JJV9,InterPro:IPR003423,InterPro:IPR010131,UniProtKB/TrEMBL:A1JJV9,NCBI_GP:CAL10896.1;Name=CAL10896.1;Note=Similar to many putative lipoproteins including: Haemophilus influenzae hypothetical protein Hi1462 SWALL:YE62_HAEIN (SWALL:P45217) (454 aa) fasta scores: E(): 7.8e-34%2C 28.7 38d in 446 aa%2C Escherichia coli probable outer membrane lipoprotein CusC precursor or ibeb or b0572 SWALL:CUSC_ECOLI (SWALL:P77211) (457 aa) fasta scores: E(): 1.3e-31%2C 29.56 38d in 460 aa%2C and to Pseudomonas aeruginosa outer membrane protein OprJ precursor or pa4597 SWALL:OPRJ_PSEAE (SWALL:Q51397) (479 aa) fasta scores: E(): 1.7e-21%2C 25.47 38d in 475 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q51397;product=putative outer-membrane efflux lipoprotein;protein_id=CAL10896.1;transl_table=11
AM286415.1	EMBL	sequence_feature	919171	919203	.	+	.	ID=id1570;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	919333	919920	.	+	.	ID=id1571;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 88.4%2C E-value 9.3e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	sequence_feature	919963	920538	.	+	.	ID=id1572;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 86.7%2C E-value 3.1e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	gene	920547	921797	.	+	.	ID=gene788;Name=YE0795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0795
AM286415.1	EMBL	CDS	920547	921797	.	+	0	ID=cds752;Parent=gene788;Dbxref=EnsemblGenomes-Gn:YE0795,EnsemblGenomes-Tr:CAL10897,GOA:A1JJW0,InterPro:IPR014030,InterPro:IPR014031,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR018201,UniProtKB/TrEMBL:A1JJW0,NCBI_GP:CAL10897.1;Name=CAL10897.1;Note=Similar to many including: Synechocystis sp. 3-oxoacyl-[acyl-carrier-protein] synthase II FabF or sll1069 SWALL:FABF_SYNY3 (SWALL:P73283) (416 aa) fasta scores: E(): 5.9e-48%2C 36.53 38d in 416 aa%2C and to Anabaena sp. 3-oxoacyl-[acyl-carrier-protein] synthase beta chain Alr3343 SWALL:Q8YRV0 (EMBL:AP003592) (416 aa) fasta scores: E(): 6.7e-49%2C 36.53 38d in 416 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P73283;product=putative acyl-carrier-protein;protein_id=CAL10897.1;transl_table=11
AM286415.1	EMBL	sequence_feature	920565	921299	.	+	.	ID=id1573;Note=Pfam match to entry PF00109 ketoacyl-synt%2CBeta-ketoacyl synthase%2C N-terminal domain%2C score 101.2%2CE-value 1.3e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF00109
AM286415.1	EMBL	sequence_feature	921021	921071	.	+	.	ID=id1574;Note=PS00606 Beta-ketoacyl synthases active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00606
AM286415.1	EMBL	sequence_feature	921321	921791	.	+	.	ID=id1575;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2CBeta-ketoacyl synthase%2C C-terminal domain%2C score 180.9%2CE-value 1.3e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF02801
AM286415.1	EMBL	gene	921908	922615	.	+	.	ID=gene789;Name=YE0796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0796
AM286415.1	EMBL	CDS	921908	922615	.	+	0	ID=cds753;Parent=gene789;Dbxref=EnsemblGenomes-Gn:YE0796,EnsemblGenomes-Tr:CAL10898,UniProtKB/TrEMBL:A1JJW1,NCBI_GP:CAL10898.1;Name=CAL10898.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10898.1;transl_table=11
AM286415.1	EMBL	gene	922629	922877	.	+	.	ID=gene790;Name=YE0797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0797
AM286415.1	EMBL	CDS	922629	922877	.	+	0	ID=cds754;Parent=gene790;Dbxref=EnsemblGenomes-Gn:YE0797,EnsemblGenomes-Tr:CAL10899,InterPro:IPR009081,UniProtKB/TrEMBL:A1JJW2,NCBI_GP:CAL10899.1;Name=CAL10899.1;Note=Weakly similar to Streptomyces coelicolor putative acyl carrier protein Sco1267 or 2scg18.14C SWALL:Q9K3H3 (EMBL:AL390188) (85 aa) fasta scores: E(): 0.38%2C 29.11 38d in 79 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL390188;product=hypothetical protein;protein_id=CAL10899.1;transl_table=11
AM286415.1	EMBL	gene	922897	923616	.	+	.	ID=gene791;Name=YE0798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0798
AM286415.1	EMBL	CDS	922897	923616	.	+	0	ID=cds755;Parent=gene791;Dbxref=EnsemblGenomes-Gn:YE0798,EnsemblGenomes-Tr:CAL10900,GOA:A1JJW3,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,UniProtKB/TrEMBL:A1JJW3,NCBI_GP:CAL10900.1;Name=CAL10900.1;Note=Similar to to many including: Chlamydia pneumoniae 3-oxoacyl-[acyl-carrier protein] reductase FabG or cpn0296 or cp0462 SWALL:FABG_CHLPN (SWALL:Q9Z8P2) (248 aa) fasta scores: E(): 1.5e-28%2C 41 38d in 239 aa and to Streptomyces avermitilis 3-oxoacyl- SWALL:Q93HC0 (EMBL:AB070946) (313 aa) fasta scores: E(): 6.7e-29%2C 39.66 38d in 237 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9Z8P2;product=putative acyl-carrier-protein;protein_id=CAL10900.1;transl_table=11
AM286415.1	EMBL	sequence_feature	922897	923607	.	+	.	ID=id1576;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 205.4%2C E-value 5.7e-59;gbkey=misc_feature;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	sequence_feature	923296	923382	.	+	.	ID=id1577;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	pseudogene	923769	924440	.	-	.	ID=gene792;Name=YE0799;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0799;pseudo=true
AM286415.1	EMBL	CDS	923769	924440	.	-	0	ID=cds756;Parent=gene792;Note=Similar to the phoshphate-binding C-termini domain of many proposed histidinol-phosphate aminotransferases including: Ralstonia solanacearum histidinol-phosphate aminotransferase 2 HisC2 or rsc0905 or rs04510 SWALL:Q8Y0Y8 (EMBL:AL646061) (374 aa) fasta scores: E(): 8.9e-14%2C 34.94 38d in 186 aa%2C and to Methylobacillus flagellatum histidinol-phosphate aminotransferase HisC or HisH SWALL:HIS8_METFL (SWALL:O07131) (368 aa) fasta scores: E(): 4.1e-11%2C 30.05 38d in 183 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:O07131;product=putative aminotransferase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	923787	924320	.	-	.	ID=id1578;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 29.4%2C E-value 2.4e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	gene	925174	926505	.	+	.	ID=gene793;Name=dsdA;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=YE0800
AM286415.1	EMBL	CDS	925174	926505	.	+	0	ID=cds757;Parent=gene793;Dbxref=EnsemblGenomes-Gn:YE0800,EnsemblGenomes-Tr:CAL10902,GOA:A1JJW5,InterPro:IPR000634,InterPro:IPR001926,InterPro:IPR011780,NCBI_GP:CAL10902.1;Name=CAL10902.1;Note=Similar to Escherichia coli D-serine dehydratase DsdA or B2366 SWALL:SDHD_ECOLI (SWALL:P00926) (442 aa) fasta scores: E(): 2e-132%2C 75.33 38d in 442 aa and to Escherichia coli O157:H7 D-serine dehydratase DsdA or z3628 or ecs3245 SWALL:Q8XCK5 (EMBL:AE005467) (442 aa) fasta scores: E(): 2.4e-133%2C 76.01 38d in 442 aa;gbkey=CDS;gene=dsdA;inference=similar to sequence:UniProtKB:P00926;product=D-serine dehydratase;protein_id=CAL10902.1;transl_table=11
AM286415.1	EMBL	sequence_feature	925387	926418	.	+	.	ID=id1579;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 184.7%2CE-value 9.8e-53;gbkey=misc_feature;gene=dsdA;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	sequence_feature	925495	925539	.	+	.	ID=id1580;Note=PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=dsdA;inference=protein motif:Prosite:PS00165
AM286415.1	EMBL	signal_peptide	926711	926851	.	+	.	ID=id1581;Note=Signal peptide predicted for YE0801 by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.998 between residues 47 and 48;gbkey=sig_peptide
AM286415.1	EMBL	gene	926771	927628	.	+	.	ID=gene794;Name=YE0801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0801
AM286415.1	EMBL	CDS	926771	927628	.	+	0	ID=cds758;Parent=gene794;Dbxref=EnsemblGenomes-Gn:YE0801,EnsemblGenomes-Tr:CAL10903,GOA:A1JJW6,InterPro:IPR001638,UniProtKB/TrEMBL:A1JJW6,NCBI_GP:CAL10903.1;Name=CAL10903.1;Note=Similar to Ralstonia solanacearum probable amino-acid-binding periplasmic Rsp1575 or rs02131 SWALL:Q8XPR3 (EMBL:AL646085) (283 aa) fasta scores: E(): 6.9e-26%2C 36.79 38d in 250 aa%2C and to Archaeoglobus fulgidus glutamine ABC transporter%2C periplasmic glutamine-binding protein Af0231 SWALL:O30008 (EMBL:AE001090) (264 aa) fasta scores: E(): 1.8e-15%2C28.88 38d in 277 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646085;product=ABC transporter%2C solute-binding component;protein_id=CAL10903.1;transl_table=11
AM286415.1	EMBL	sequence_feature	926888	927583	.	+	.	ID=id1582;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 168.2%2C E-value 8.7e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	gene	927640	928299	.	+	.	ID=gene795;Name=YE0802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0802
AM286415.1	EMBL	CDS	927640	928299	.	+	0	ID=cds759;Parent=gene795;Dbxref=EnsemblGenomes-Gn:YE0802,EnsemblGenomes-Tr:CAL10904,GOA:A1JJW7,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JJW7,NCBI_GP:CAL10904.1;Name=CAL10904.1;Note=Similar to Bacillus halodurans ABC transporter Bh1462 SWALL:Q9KCV7 (EMBL:AP001512) (218 aa) fasta scores: E(): 7.2e-24%2C 37.26 38d in 212 aa and to Deinococcus radiodurans amino acid ABC transporter%2C permease protein Dr1028 SWALL:Q9RVK0 (EMBL:AE001954) (216 aa) fasta scores: E(): 2.3e-23%2C 36.32 38d in 212 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP001512;product=ABC transporter%2C inner-membrane component;protein_id=CAL10904.1;transl_table=11
AM286415.1	EMBL	sequence_feature	927697	927765	.	+	.	ID=id1583;Note=3 probable transmembrane helices predicted for YE0802 by TMHMM2.0 at aa 20-42%2C 72-94 and 188-210;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	927853	927921	.	+	.	ID=id1583;Note=3 probable transmembrane helices predicted for YE0802 by TMHMM2.0 at aa 20-42%2C 72-94 and 188-210;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	928201	928269	.	+	.	ID=id1583;Note=3 probable transmembrane helices predicted for YE0802 by TMHMM2.0 at aa 20-42%2C 72-94 and 188-210;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	927967	928179	.	+	.	ID=id1584;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 55.5%2C E-value 7.7e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	927970	928056	.	+	.	ID=id1585;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	sequence_feature	927985	928050	.	+	.	ID=id1586;Note=Predicted helix-turn-helix motif with score 1162.000%2C SD 3.14 at aa 116-137%2C sequence PGQLEAAAMCGLSPRQALWHIQ;gbkey=misc_feature
AM286415.1	EMBL	gene	928296	928934	.	+	.	ID=gene796;Name=YE0803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0803
AM286415.1	EMBL	CDS	928296	928934	.	+	0	ID=cds760;Parent=gene796;Dbxref=EnsemblGenomes-Gn:YE0803,EnsemblGenomes-Tr:CAL10905,GOA:A1JJW8,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JJW8,NCBI_GP:CAL10905.1;Name=CAL10905.1;Note=Similar to Bacillus subtilis probable amino-acid ABC transporter permease protein YckA SWALL:YCKA_BACSU (SWALL:P42399) (226 aa) fasta scores: E(): 5.6e-20%2C 35.46 id in 203 aa%2C and to Deinococcus radiodurans amino acid ABC transporter%2C permease protein Dr0565 SWALL:Q9RWV0 (EMBL:AE001914) (226 aa) fasta scores: E(): 1e-19%2C 38.16 id in 207 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P42399;product=ABC transporter%2C inner-membrane component;protein_id=CAL10905.1;transl_table=11
AM286415.1	EMBL	sequence_feature	928338	928406	.	+	.	ID=id1587;Note=3 probable transmembrane helices predicted for YE0803 by TMHMM2.0 at aa 15-37%2C 66-88 and 173-195;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	928491	928559	.	+	.	ID=id1587;Note=3 probable transmembrane helices predicted for YE0803 by TMHMM2.0 at aa 15-37%2C 66-88 and 173-195;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	928812	928880	.	+	.	ID=id1587;Note=3 probable transmembrane helices predicted for YE0803 by TMHMM2.0 at aa 15-37%2C 66-88 and 173-195;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	928608	928832	.	+	.	ID=id1588;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 47.4%2C E-value 2e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	928936	929751	.	+	.	ID=gene797;Name=YE0804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0804
AM286415.1	EMBL	CDS	928936	929751	.	+	0	ID=cds761;Parent=gene797;Dbxref=EnsemblGenomes-Gn:YE0804,EnsemblGenomes-Tr:CAL10906,GOA:A1JJW9,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJW9,NCBI_GP:CAL10906.1;Name=CAL10906.1;Note=Similar to many including: Escherichia coli histidine transport ATP-binding protein HisP or b2306 SWALL:HISP_ECOLI (SWALL:P07109) (257 aa) fasta scores: E(): 3.8e-38%2C 52.24 38d in 245 aa%2C and to Streptomyces coelicolor ATP-binding protein Sco5258 or 2sc7g11.20C SWALL:Q9F3K7 (EMBL:AL391763) (253 aa) fasta scores: E(): 2.1e-40%2C 51.4 38d in 249 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P07109;product=ABC transporter%2C ATP-binding component;protein_id=CAL10906.1;transl_table=11
AM286415.1	EMBL	sequence_feature	929032	929622	.	+	.	ID=id1589;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 212.3%2C E-value 4.9e-61;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	929053	929076	.	+	.	ID=id1590;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	929395	929439	.	+	.	ID=id1591;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	929744	931027	.	+	.	ID=gene798;Name=YE0805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0805
AM286415.1	EMBL	CDS	929744	931027	.	+	0	ID=cds762;Parent=gene798;Dbxref=EnsemblGenomes-Gn:YE0805,EnsemblGenomes-Tr:CAL10907,GOA:A1JJX0,InterPro:IPR002933,InterPro:IPR010158,InterPro:IPR011650,UniProtKB/TrEMBL:A1JJX0,NCBI_GP:CAL10907.1;Name=CAL10907.1;gbkey=CDS;product=putative amino acid hydrolase;protein_id=CAL10907.1;transl_table=11
AM286415.1	EMBL	sequence_feature	929807	930820	.	+	.	ID=id1592;Note=Pfam match to entry PF01546 Peptidase_M20%2CPeptidase family M20/M25/M40%2C score 35.9%2C E-value 3.4e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF01546
AM286415.1	EMBL	gene	931098	931694	.	+	.	ID=gene799;Name=YE0806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0806
AM286415.1	EMBL	CDS	931098	931694	.	+	0	ID=cds763;Parent=gene799;Dbxref=EnsemblGenomes-Gn:YE0806,EnsemblGenomes-Tr:CAL10908,InterPro:IPR018959,UniProtKB/TrEMBL:A1JJX1,NCBI_GP:CAL10908.1;Name=CAL10908.1;Note=Similar to Caulobacter crescentus hypothetical protein Cc1828 SWALL:Q9A798 (EMBL:AE005857) (208 aa) fasta scores: E(): 1.5e-14%2C 32.3 38d in 195 aa and Deinococcus radiodurans hypothetical protein Dr0613 SWALL:Q9RWQ3 (EMBL:AE001919) (216 aa) fasta scores: E(): 1.2e-12%2C31.66 38d in 180 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005857;product=conserved hypothetical protein;protein_id=CAL10908.1;transl_table=11
AM286415.1	EMBL	gene	931780	932370	.	+	.	ID=gene800;Name=YE0807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0807
AM286415.1	EMBL	CDS	931780	932370	.	+	0	ID=cds764;Parent=gene800;Dbxref=EnsemblGenomes-Gn:YE0807,EnsemblGenomes-Tr:CAL10909,GOA:A1JJX2,InterPro:IPR001387,InterPro:IPR010982,InterPro:IPR011051,InterPro:IPR013096,InterPro:IPR014710,UniProtKB/TrEMBL:A1JJX2,NCBI_GP:CAL10909.1;Name=CAL10909.1;Note=Similar to Rhizobium loti hypothetical protein Mll7669 SWALL:Q985H7 (EMBL:AP003012) (205 aa) fasta scores: E(): 1.2e-26%2C 47.44 38d in 196 aa and to Rhizobium loti transcriptional regulator mlr7385 SWALL:Q986F2 (EMBL:AP003011) (227 aa) fasta scores: E(): 2.2e-11%2C34.44 38d in 180 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003012;product=putative transcriptional regulatory protein;protein_id=CAL10909.1;transl_table=11
AM286415.1	EMBL	sequence_feature	931834	931998	.	+	.	ID=id1593;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 51.6%2C E-value 1.1e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	931861	931926	.	+	.	ID=id1594;Note=Predicted helix-turn-helix motif with score 1818.000%2C SD 5.38 at aa 28-49%2C sequence ITLKQLALKVGCSESLLSKLEN;gbkey=misc_feature
AM286415.1	EMBL	gene	932613	934721	.	-	.	ID=gene801;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=YE0808
AM286415.1	EMBL	CDS	932613	934721	.	-	0	ID=cds765;Parent=gene801;Dbxref=EnsemblGenomes-Gn:YE0808,EnsemblGenomes-Tr:CAL10910,GOA:A1JJX3,InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR004540,InterPro:IPR005225,InterPro:IPR005517,InterPro:IPR009000,InterPro:IPR009022,InterPro:IPR014721,InterPro:IPR020568,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJX3,NCBI_GP:CAL10910.1;Name=CAL10910.1;Note=Similar to Yersinia pestis elongation factor G fusA or Ypo0202 SWALL:EFG_YERPE (SWALL:Q8ZJB3) (702 aa) fasta scores: E(): 3.1e-178%2C 67.37 38d in 702 aa%2C and to Ralstonia solanacearum elongation factor g 1 fusa or rsc3022 or rs04735 SWALL:EFG1_RALSO (SWALL:Q8XV10) (703 aa) fasta scores: E(): 9.7e-203%2C 76.24 38d in 703 aa;gbkey=CDS;gene=fusA;inference=similar to sequence:UniProtKB:Q8ZJB3;product=elongation factor G;protein_id=CAL10910.1;transl_table=11
AM286415.1	EMBL	sequence_feature	932640	932906	.	-	.	ID=id1595;Note=Pfam match to entry PF00679 EFG_C%2C Elongation factor G C-terminus%2C score 168.8%2C E-value 5.8e-48;gbkey=misc_feature;gene=fusA;inference=protein motif:PFAM:PF00679
AM286415.1	EMBL	sequence_feature	932910	933272	.	-	.	ID=id1596;Note=Pfam match to entry PF03764 EFG_IV%2C Elongation factor G%2C domain IV%2C score 221.3%2C E-value 9.2e-64;gbkey=misc_feature;gene=fusA;inference=protein motif:PFAM:PF03764
AM286415.1	EMBL	sequence_feature	933534	933773	.	-	.	ID=id1597;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 97.2%2C E-value 2.2e-26;gbkey=misc_feature;gene=fusA;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	sequence_feature	933852	934631	.	-	.	ID=id1598;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu GTP binding domain%2C score 265.9%2C E-value 3.4e-77;gbkey=misc_feature;gene=fusA;inference=protein motif:PFAM:PF00009
AM286415.1	EMBL	sequence_feature	934524	934571	.	-	.	ID=id1599;Note=PS00301 GTP-binding elongation factors signature.;gbkey=misc_feature;gene=fusA;inference=protein motif:Prosite:PS00301
AM286415.1	EMBL	gene	935067	935414	.	+	.	ID=gene802;Name=YE0809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0809
AM286415.1	EMBL	CDS	935067	935414	.	+	0	ID=cds766;Parent=gene802;Dbxref=EnsemblGenomes-Gn:YE0809,EnsemblGenomes-Tr:CAL10911,GOA:A1JJX4,InterPro:IPR001845,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJX4,NCBI_GP:CAL10911.1;Name=CAL10911.1;Note=Similar to many putative regulators including: Anabaena sp. transcriptional regulator Alr1867 SWALL:Q8YVV6 (EMBL:AP003587) (112 aa) fasta scores: E(): 6.3e-15%2C 44.66 38d in 103 aa%2C and to Rhizobium meliloti regulator nitr SWALL:Q9AH16 (EMBL:AF323118) (123 aa) fasta scores: E(): 5.5e-12%2C 45.45 38d in 99 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003587;product=putative ArsR-family transcriptional regulatory protein;protein_id=CAL10911.1;transl_table=11
AM286415.1	EMBL	sequence_feature	935115	935345	.	+	.	ID=id1600;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 22.6%2C E-value 0.00061;gbkey=misc_feature;inference=protein motif:PFAM:PF01022
AM286415.1	EMBL	gene	935455	936705	.	-	.	ID=gene803;Name=sorE;gbkey=Gene;gene=sorE;gene_biotype=protein_coding;locus_tag=YE0810
AM286415.1	EMBL	CDS	935455	936705	.	-	0	ID=cds767;Parent=gene803;Dbxref=EnsemblGenomes-Gn:YE0810,EnsemblGenomes-Tr:CAL10912,GOA:A1JJX5,InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR016040,UniProtKB/TrEMBL:A1JJX5,NCBI_GP:CAL10912.1;Name=CAL10912.1;Note=Similar to Klebsiella pneumoniae L-sorbose 1-phosphate reductase SorE SWALL:SORE_KLEPN (SWALL:P37084) (410 aa) fasta scores: E(): 1.3e-116%2C 71.98 38d in 414 aa and to Escherichia coli O157:H7 putative L-sorbose-1-p-reductase Z5613 or ecs4941 SWALL:Q8X5Z6 (EMBL:AE005634) (413 aa) fasta scores: E(): 8.5e-122%2C 75 id in 416 aa;gbkey=CDS;gene=sorE;inference=similar to sequence:UniProtKB:P37084;product=L-sorbose 1-phosphate reductase;protein_id=CAL10912.1;transl_table=11
AM286415.1	EMBL	sequence_feature	935611	936684	.	-	.	ID=id1601;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenase%2C score 88.3%2C E-value 1e-23;gbkey=misc_feature;gene=sorE;inference=protein motif:PFAM:PF00107
AM286415.1	EMBL	gene	936793	937623	.	-	.	ID=gene804;Name=sorM;gbkey=Gene;gene=sorM;gene_biotype=protein_coding;locus_tag=YE0811
AM286415.1	EMBL	CDS	936793	937623	.	-	0	ID=cds768;Parent=gene804;Dbxref=EnsemblGenomes-Gn:YE0811,EnsemblGenomes-Tr:CAL10913,GOA:A1JJX6,InterPro:IPR004704,InterPro:IPR018405,UniProtKB/TrEMBL:A1JJX6,NCBI_GP:CAL10913.1;Name=CAL10913.1;Note=Similar to Klebsiella pneumoniae PTS system%2Csorbose-specific IId component SorM SWALL:PTRD_KLEPN (SWALL:P37083) (274 aa) fasta scores: E(): 1.2e-89%2C 83.02 id in 271 aa%2C and to Escherichia coli O157:H7 putative sorbose PTS component z5614 SWALL:Q8X3K0 (EMBL:AE005634) (274 aa) fasta scores: E(): 1.2e-89%2C 83.02 38d in 271 aa;gbkey=CDS;gene=sorM;inference=similar to sequence:UniProtKB:P37083;product=sorbose-specific PTS uptake system%2C component;protein_id=CAL10913.1;transl_table=11
AM286415.1	EMBL	sequence_feature	936799	937608	.	-	.	ID=id1602;Note=Pfam match to entry PF03613 EIID-AGA%2C PTS system mannose/fructose/sorbose family IID component%2C score 594.5%2C E-value 4.3e-176;gbkey=misc_feature;gene=sorM;inference=protein motif:PFAM:PF03613
AM286415.1	EMBL	sequence_feature	937378	937437	.	-	.	ID=id1603;Note=5 probable transmembrane helices predicted for YE0811 by TMHMM2.0 at aa 63-82%2C 124-146%2C 187-209%2C 224-246 and 253-275;gbkey=misc_feature;gene=sorM;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	937186	937254	.	-	.	ID=id1603;Note=5 probable transmembrane helices predicted for YE0811 by TMHMM2.0 at aa 63-82%2C 124-146%2C 187-209%2C 224-246 and 253-275;gbkey=misc_feature;gene=sorM;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	936997	937065	.	-	.	ID=id1603;Note=5 probable transmembrane helices predicted for YE0811 by TMHMM2.0 at aa 63-82%2C 124-146%2C 187-209%2C 224-246 and 253-275;gbkey=misc_feature;gene=sorM;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	936886	936954	.	-	.	ID=id1603;Note=5 probable transmembrane helices predicted for YE0811 by TMHMM2.0 at aa 63-82%2C 124-146%2C 187-209%2C 224-246 and 253-275;gbkey=misc_feature;gene=sorM;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	936799	936867	.	-	.	ID=id1603;Note=5 probable transmembrane helices predicted for YE0811 by TMHMM2.0 at aa 63-82%2C 124-146%2C 187-209%2C 224-246 and 253-275;gbkey=misc_feature;gene=sorM;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	937635	938462	.	-	.	ID=gene805;Name=sorA;gbkey=Gene;gene=sorA;gene_biotype=protein_coding;locus_tag=YE0812
AM286415.1	EMBL	CDS	937635	938462	.	-	0	ID=cds769;Parent=gene805;Dbxref=EnsemblGenomes-Gn:YE0812,EnsemblGenomes-Tr:CAL10914,GOA:A1JJX7,InterPro:IPR004700,InterPro:IPR018404,UniProtKB/TrEMBL:A1JJX7,NCBI_GP:CAL10914.1;Name=CAL10914.1;Note=Similar to Klebsiella pneumoniae PTS system%2Csorbose-specific IIc component SorA SWALL:PTRC_KLEPN (SWALL:P37082) (266 aa) fasta scores: E(): 1.2e-73%2C 80.15 id in 267 aa%2C and to Escherichia coli%2C and Escherichia coli O157:H7 PTS system%2C mannose-specific IIc component or PtsP or pel or b1818 or z2861 or ecs2528 SWALL:PTNC_ECOLI (SWALL:P08187) (266 aa) fasta scores: E(): 5.8e-61%2C 63.91 id in 266 aa;gbkey=CDS;gene=sorA;inference=similar to sequence:UniProtKB:P37082;product=sorbose-specific PTS uptake system component;protein_id=CAL10914.1;transl_table=11
AM286415.1	EMBL	sequence_feature	938358	938426	.	-	.	ID=id1604;Note=7 probable transmembrane helices predicted for YE0812 by TMHMM2.0 at aa 13-35%2C 50-72%2C 85-102%2C 106-128%2C149-171%2C 186-208 and 215-249;gbkey=misc_feature;gene=sorA;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	938247	938315	.	-	.	ID=id1604;Note=7 probable transmembrane helices predicted for YE0812 by TMHMM2.0 at aa 13-35%2C 50-72%2C 85-102%2C 106-128%2C149-171%2C 186-208 and 215-249;gbkey=misc_feature;gene=sorA;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	938157	938210	.	-	.	ID=id1604;Note=7 probable transmembrane helices predicted for YE0812 by TMHMM2.0 at aa 13-35%2C 50-72%2C 85-102%2C 106-128%2C149-171%2C 186-208 and 215-249;gbkey=misc_feature;gene=sorA;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	938079	938147	.	-	.	ID=id1604;Note=7 probable transmembrane helices predicted for YE0812 by TMHMM2.0 at aa 13-35%2C 50-72%2C 85-102%2C 106-128%2C149-171%2C 186-208 and 215-249;gbkey=misc_feature;gene=sorA;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	937950	938018	.	-	.	ID=id1604;Note=7 probable transmembrane helices predicted for YE0812 by TMHMM2.0 at aa 13-35%2C 50-72%2C 85-102%2C 106-128%2C149-171%2C 186-208 and 215-249;gbkey=misc_feature;gene=sorA;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	937839	937907	.	-	.	ID=id1604;Note=7 probable transmembrane helices predicted for YE0812 by TMHMM2.0 at aa 13-35%2C 50-72%2C 85-102%2C 106-128%2C149-171%2C 186-208 and 215-249;gbkey=misc_feature;gene=sorA;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	937716	937820	.	-	.	ID=id1604;Note=7 probable transmembrane helices predicted for YE0812 by TMHMM2.0 at aa 13-35%2C 50-72%2C 85-102%2C 106-128%2C149-171%2C 186-208 and 215-249;gbkey=misc_feature;gene=sorA;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	937719	938426	.	-	.	ID=id1605;Note=Pfam match to entry PF03609 EII-Sor%2C PTS system sorbose-specific iic component%2C score 474.3%2C E-value 6.4e-140;gbkey=misc_feature;gene=sorA;inference=protein motif:PFAM:PF03609
AM286415.1	EMBL	gene	938574	939065	.	-	.	ID=gene806;Name=sorB;gbkey=Gene;gene=sorB;gene_biotype=protein_coding;locus_tag=YE0813
AM286415.1	EMBL	CDS	938574	939065	.	-	0	ID=cds770;Parent=gene806;Dbxref=EnsemblGenomes-Gn:YE0813,EnsemblGenomes-Tr:CAL10915,GOA:A1JJX8,InterPro:IPR004720,InterPro:IPR018455,UniProtKB/TrEMBL:A1JJX8,NCBI_GP:CAL10915.1;Name=CAL10915.1;Note=Similar to Klebsiella pneumoniae PTS system%2CSorBose-specific IIb component SorB SWALL:PTRB_KLEPN (SWALL:P37081) (164 aa) fasta scores: E(): 1.4e-40%2C 68.55 id in 159 aa%2C and to Escherichia coli O157:H7 putative sorbose PTS component z5616 or ecs5001 SWALL:Q8X5Z4 (EMBL:AE005634) (164 aa) fasta scores: E(): 4.9e-41%2C69.81 38d in 159 aa;gbkey=CDS;gene=sorB;inference=similar to sequence:UniProtKB:P37081;product=sorbose-specific PTS uptake system component;protein_id=CAL10915.1;transl_table=11
AM286415.1	EMBL	sequence_feature	938610	939062	.	-	.	ID=id1606;Note=Pfam match to entry PF03830 PTSIIB_sorb%2C PTS system sorbose subfamily IIB component%2C score 297.1%2C E-value 1.4e-86;gbkey=misc_feature;gene=sorB;inference=protein motif:PFAM:PF03830
AM286415.1	EMBL	gene	939062	939484	.	-	.	ID=gene807;Name=sorF;gbkey=Gene;gene=sorF;gene_biotype=protein_coding;locus_tag=YE0814
AM286415.1	EMBL	CDS	939062	939484	.	-	0	ID=cds771;Parent=gene807;Dbxref=EnsemblGenomes-Gn:YE0814,EnsemblGenomes-Tr:CAL10916,GOA:A1JJX9,InterPro:IPR004701,InterPro:IPR013789,UniProtKB/TrEMBL:A1JJX9,NCBI_GP:CAL10916.1;Name=CAL10916.1;Note=Similar to Klebsiella pneumoniae PTS system%2Csorbose-specific IIa component SorF SWALL:PTRA_KLEPN (SWALL:P37080) (135 aa) fasta scores: E(): 9.9e-21%2C 48.88 id in 135 aa%2C and to Escherichia coli O157:H7 putative sorbose PTS component z5617 or ecs5002 SWALL:Q8X5Z3 (EMBL:AE005634) (135 aa) fasta scores: E(): 3.4e-21%2C51.11 38d in 135 aa;gbkey=CDS;gene=sorF;inference=similar to sequence:UniProtKB:P37080;product=sorbose-specific PTS uptake system component;protein_id=CAL10916.1;transl_table=11
AM286415.1	EMBL	sequence_feature	939191	939460	.	-	.	ID=id1607;Note=Pfam match to entry PF03610 EIIA-man%2C PTS system fructose IIA component%2C score 101.9%2C E-value 8e-28;gbkey=misc_feature;gene=sorF;inference=protein motif:PFAM:PF03610
AM286415.1	EMBL	gene	939583	940542	.	-	.	ID=gene808;Name=YE0815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0815
AM286415.1	EMBL	CDS	939583	940542	.	-	0	ID=cds772;Parent=gene808;Dbxref=EnsemblGenomes-Gn:YE0815,EnsemblGenomes-Tr:CAL10917,GOA:A1JJY0,InterPro:IPR007324,InterPro:IPR011991,InterPro:IPR025246,UniProtKB/TrEMBL:A1JJY0,NCBI_GP:CAL10917.1;Name=CAL10917.1;gbkey=CDS;product=transcriptional regulatory protein;protein_id=CAL10917.1;transl_table=11
AM286415.1	EMBL	sequence_feature	940414	940479	.	-	.	ID=id1608;Note=Predicted helix-turn-helix motif with score 2116.000%2C SD 6.39 at aa 22-43%2C sequence FTQAEIARALGIYRTSISRMLK;gbkey=misc_feature
AM286415.1	EMBL	gene	940906	942549	.	-	.	ID=gene809;Name=fumA;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=YE0816
AM286415.1	EMBL	CDS	940906	942549	.	-	0	ID=cds773;Parent=gene809;Dbxref=EnsemblGenomes-Gn:YE0816,EnsemblGenomes-Tr:CAL10918,GOA:A1JJY1,InterPro:IPR004646,InterPro:IPR004647,InterPro:IPR011167,InterPro:IPR020557,UniProtKB/TrEMBL:A1JJY1,NCBI_GP:CAL10918.1;Name=CAL10918.1;gbkey=CDS;gene=fumA;product=fumarate hydratase%2C class I;protein_id=CAL10918.1;transl_table=11
AM286415.1	EMBL	sequence_feature	941059	942507	.	-	.	ID=id1609;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 312.7%2C E-value 2.9e-91;gbkey=misc_feature;gene=fumA;inference=protein motif:PFAM:PF00206
AM286415.1	EMBL	sequence_feature	941155	941184	.	-	.	ID=id1610;Note=PS00163 Fumarate lyases signature.;gbkey=misc_feature;gene=fumA;inference=protein motif:Prosite:PS00163
AM286415.1	EMBL	sequence_feature	941596	941628	.	-	.	ID=id1611;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=fumA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	943453	944427	.	+	.	ID=gene810;Name=YE0818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0818
AM286415.1	EMBL	CDS	943453	944427	.	+	0	ID=cds774;Parent=gene810;Dbxref=EnsemblGenomes-Gn:YE0818,EnsemblGenomes-Tr:CAL10919,InterPro:IPR025997,InterPro:IPR028082,UniProtKB/TrEMBL:A1JJY2,NCBI_GP:CAL10919.1;Name=CAL10919.1;gbkey=CDS;product=putative sugar ABC transporter%2C periplasmic protein;protein_id=CAL10919.1;transl_table=11
AM286415.1	EMBL	sequence_feature	943513	943581	.	+	.	ID=id1612;Note=1 probable transmembrane helix predicted for YE0818 by TMHMM2.0 at aa 21-43;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	943561	944403	.	+	.	ID=id1613;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score -0.1%2C E-value 1.6e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	944506	945120	.	+	.	ID=gene811;Name=YE0819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0819
AM286415.1	EMBL	CDS	944506	945120	.	+	0	ID=cds775;Parent=gene811;Dbxref=EnsemblGenomes-Gn:YE0819,EnsemblGenomes-Tr:CAL10920,InterPro:IPR014582,UniProtKB/TrEMBL:A1JJY3,NCBI_GP:CAL10920.1;Name=CAL10920.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL10920.1;transl_table=11
AM286415.1	EMBL	sequence_feature	944539	944571	.	+	.	ID=id1614;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	945120	946643	.	+	.	ID=gene812;Name=YE0820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0820
AM286415.1	EMBL	CDS	945120	946643	.	+	0	ID=cds776;Parent=gene812;Dbxref=EnsemblGenomes-Gn:YE0820,EnsemblGenomes-Tr:CAL10921,GOA:A1JJY4,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR004087,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJY4,NCBI_GP:CAL10921.1;Name=CAL10921.1;gbkey=CDS;product=putative sugar ABC transporter%2C ATP-binding protein;protein_id=CAL10921.1;transl_table=11
AM286415.1	EMBL	sequence_feature	945219	945782	.	+	.	ID=id1615;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 186.3%2C E-value 3.3e-53;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	945240	945263	.	+	.	ID=id1616;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	945981	946565	.	+	.	ID=id1617;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 102.9%2C E-value 4.1e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	946338	946382	.	+	.	ID=id1618;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	946640	947758	.	+	.	ID=gene813;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=YE0821
AM286415.1	EMBL	CDS	946640	947758	.	+	0	ID=cds777;Parent=gene813;Dbxref=EnsemblGenomes-Gn:YE0821,EnsemblGenomes-Tr:CAL10922,GOA:A1JJY7,InterPro:IPR001851,UniProtKB/TrEMBL:A1JJY7,NCBI_GP:CAL10922.1;Name=CAL10922.1;gbkey=CDS;gene=rbsC;product=putative sugar ABC transporter%2C permease protein;protein_id=CAL10922.1;transl_table=11
AM286415.1	EMBL	sequence_feature	946751	946819	.	+	.	ID=id1619;Note=10 probable transmembrane helices predicted for YE0821 by TMHMM2.0 at aa 38-60%2C 65-87%2C 94-116%2C 120-142%2C147-169%2C 194-216%2C 247-269%2C 279-296%2C 301-320 and 325-342;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	946832	946900	.	+	.	ID=id1619;Note=10 probable transmembrane helices predicted for YE0821 by TMHMM2.0 at aa 38-60%2C 65-87%2C 94-116%2C 120-142%2C147-169%2C 194-216%2C 247-269%2C 279-296%2C 301-320 and 325-342;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	946919	946987	.	+	.	ID=id1619;Note=10 probable transmembrane helices predicted for YE0821 by TMHMM2.0 at aa 38-60%2C 65-87%2C 94-116%2C 120-142%2C147-169%2C 194-216%2C 247-269%2C 279-296%2C 301-320 and 325-342;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	946997	947065	.	+	.	ID=id1619;Note=10 probable transmembrane helices predicted for YE0821 by TMHMM2.0 at aa 38-60%2C 65-87%2C 94-116%2C 120-142%2C147-169%2C 194-216%2C 247-269%2C 279-296%2C 301-320 and 325-342;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	947078	947146	.	+	.	ID=id1619;Note=10 probable transmembrane helices predicted for YE0821 by TMHMM2.0 at aa 38-60%2C 65-87%2C 94-116%2C 120-142%2C147-169%2C 194-216%2C 247-269%2C 279-296%2C 301-320 and 325-342;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	947219	947287	.	+	.	ID=id1619;Note=10 probable transmembrane helices predicted for YE0821 by TMHMM2.0 at aa 38-60%2C 65-87%2C 94-116%2C 120-142%2C147-169%2C 194-216%2C 247-269%2C 279-296%2C 301-320 and 325-342;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	947378	947446	.	+	.	ID=id1619;Note=10 probable transmembrane helices predicted for YE0821 by TMHMM2.0 at aa 38-60%2C 65-87%2C 94-116%2C 120-142%2C147-169%2C 194-216%2C 247-269%2C 279-296%2C 301-320 and 325-342;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	947474	947527	.	+	.	ID=id1619;Note=10 probable transmembrane helices predicted for YE0821 by TMHMM2.0 at aa 38-60%2C 65-87%2C 94-116%2C 120-142%2C147-169%2C 194-216%2C 247-269%2C 279-296%2C 301-320 and 325-342;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	947540	947599	.	+	.	ID=id1619;Note=10 probable transmembrane helices predicted for YE0821 by TMHMM2.0 at aa 38-60%2C 65-87%2C 94-116%2C 120-142%2C147-169%2C 194-216%2C 247-269%2C 279-296%2C 301-320 and 325-342;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	947612	947665	.	+	.	ID=id1619;Note=10 probable transmembrane helices predicted for YE0821 by TMHMM2.0 at aa 38-60%2C 65-87%2C 94-116%2C 120-142%2C147-169%2C 194-216%2C 247-269%2C 279-296%2C 301-320 and 325-342;gbkey=misc_feature;gene=rbsC;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	946784	947698	.	+	.	ID=id1620;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score 6.6%2C E-value 5.6e-07;gbkey=misc_feature;gene=rbsC;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	gene	948034	948864	.	+	.	ID=gene814;Name=YE0822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0822
AM286415.1	EMBL	CDS	948034	948864	.	+	0	ID=cds778;Parent=gene814;Dbxref=EnsemblGenomes-Gn:YE0822,EnsemblGenomes-Tr:CAL10923,InterPro:IPR005474,InterPro:IPR029061,UniProtKB/TrEMBL:A1JJY9,NCBI_GP:CAL10923.1;Name=CAL10923.1;gbkey=CDS;product=putative N-terminal region of transketolase;protein_id=CAL10923.1;transl_table=11
AM286415.1	EMBL	sequence_feature	948067	948855	.	+	.	ID=id1621;Note=Pfam match to entry PF00456 transketolase%2CTransketolase%2C thiamine diphosphate binding domain%2C score 30.0%2C E-value 6.7e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00456
AM286415.1	EMBL	gene	948857	949801	.	+	.	ID=gene815;Name=YE0823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0823
AM286415.1	EMBL	CDS	948857	949801	.	+	0	ID=cds779;Parent=gene815;Dbxref=EnsemblGenomes-Gn:YE0823,EnsemblGenomes-Tr:CAL10924,GOA:A1JJZ2,InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR009014,InterPro:IPR029061,UniProtKB/TrEMBL:A1JJZ2,NCBI_GP:CAL10924.1;Name=CAL10924.1;gbkey=CDS;product=C-terminal region of transketolase;protein_id=CAL10924.1;transl_table=11
AM286415.1	EMBL	sequence_feature	948866	949366	.	+	.	ID=id1622;Note=Pfam match to entry PF02779 transket_pyr%2CTransketolase%2C pyridine binding domain%2C score 56.3%2CE-value 4.3e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF02779
AM286415.1	EMBL	sequence_feature	949397	949765	.	+	.	ID=id1623;Note=Pfam match to entry PF02780 transketolase_C%2CTransketolase%2C C-terminal domain%2C score 113.0%2C E-value 3.7e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF02780
AM286415.1	EMBL	gene	949804	951291	.	+	.	ID=gene816;Name=YE0824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0824
AM286415.1	EMBL	CDS	949804	951291	.	+	0	ID=cds780;Parent=gene816;Dbxref=EnsemblGenomes-Gn:YE0824,EnsemblGenomes-Tr:CAL10925,GOA:A1JJZ5,InterPro:IPR018484,InterPro:IPR018485,UniProtKB/TrEMBL:A1JJZ5,NCBI_GP:CAL10925.1;Name=CAL10925.1;gbkey=CDS;product=glycerol kinase;protein_id=CAL10925.1;transl_table=11
AM286415.1	EMBL	sequence_feature	949816	950559	.	+	.	ID=id1624;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C N-terminal domain%2C score 261.1%2CE-value 1e-75;gbkey=misc_feature;inference=protein motif:PFAM:PF00370
AM286415.1	EMBL	sequence_feature	949996	950037	.	+	.	ID=id1625;Note=PS00287 Cysteine proteases inhibitors signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00287
AM286415.1	EMBL	sequence_feature	950572	951234	.	+	.	ID=id1626;Note=Pfam match to entry PF02782 FGGY_C%2C FGGY family of carbohydrate kinases%2C C-terminal domain%2C score 153.5%2CE-value 2.4e-43;gbkey=misc_feature;inference=protein motif:PFAM:PF02782
AM286415.1	EMBL	sequence_feature	951121	951144	.	+	.	ID=id1627;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	951312	952733	.	+	.	ID=gene817;Name=YE0825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0825
AM286415.1	EMBL	CDS	951312	952733	.	+	0	ID=cds781;Parent=gene817;Dbxref=EnsemblGenomes-Gn:YE0825,EnsemblGenomes-Tr:CAL10926,GOA:A1JJZ6,InterPro:IPR009015,InterPro:IPR015888,UniProtKB/TrEMBL:A1JJZ6,NCBI_GP:CAL10926.1;Name=CAL10926.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10926.1;transl_table=11
AM286415.1	EMBL	sequence_feature	952239	952271	.	+	.	ID=id1628;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	952829	953773	.	-	.	ID=gene818;Name=YE0826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0826
AM286415.1	EMBL	CDS	952829	953773	.	-	0	ID=cds782;Parent=gene818;Dbxref=EnsemblGenomes-Gn:YE0826,EnsemblGenomes-Tr:CAL10927,GOA:A1JJZ7,InterPro:IPR007324,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJZ7,NCBI_GP:CAL10927.1;Name=CAL10927.1;gbkey=CDS;product=putative transcriptional regulatory protein;protein_id=CAL10927.1;transl_table=11
AM286415.1	EMBL	sequence_feature	953645	953710	.	-	.	ID=id1629;Note=Predicted helix-turn-helix motif with score 2038.000%2C SD 6.13 at aa 22-43%2C sequence MKQSEIADSLHLSQSFVSRAIT;gbkey=misc_feature
AM286415.1	EMBL	gene	953931	955259	.	-	.	ID=gene819;Name=YE0827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0827
AM286415.1	EMBL	CDS	953931	955259	.	-	0	ID=cds783;Parent=gene819;Dbxref=EnsemblGenomes-Gn:YE0827,EnsemblGenomes-Tr:CAL10928,GOA:A1JJZ8,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JJZ8,NCBI_GP:CAL10928.1;Name=CAL10928.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL10928.1;transl_table=11
AM286415.1	EMBL	sequence_feature	955173	955241	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	955095	955163	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	954999	955058	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	954903	954971	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	954801	954869	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	954729	954788	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	954585	954653	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	954489	954557	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	954402	954470	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	954324	954392	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	954228	954287	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	954150	954218	.	-	.	ID=id1630;Note=12 probable transmembrane helices predicted for YE0827 by TMHMM2.0 at aa 7-29%2C 33-55%2C 68-87%2C 97-119%2C131-153%2C 158-177%2C 203-225%2C 235-257%2C 264-286%2C 290-312%2C325-344 and 348-370;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	955495	955983	.	+	.	ID=gene820;Name=YE0828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0828
AM286415.1	EMBL	CDS	955495	955983	.	+	0	ID=cds784;Parent=gene820;Dbxref=EnsemblGenomes-Gn:YE0828,EnsemblGenomes-Tr:CAL10929,InterPro:IPR008136,UniProtKB/TrEMBL:A1JJZ9,NCBI_GP:CAL10929.1;Name=CAL10929.1;gbkey=CDS;product=putative competence-damaged protein;protein_id=CAL10929.1;transl_table=11
AM286415.1	EMBL	sequence_feature	955510	955977	.	+	.	ID=id1631;Note=Pfam match to entry PF02464 CinA%2CCompetence-damaged protein%2C score 286.9%2C E-value 1.6e-83;gbkey=misc_feature;inference=protein motif:PFAM:PF02464
AM286415.1	EMBL	gene	956095	957159	.	+	.	ID=gene821;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;gene_synonym=lexB,recH,rnmB,tif,umuB,zab;locus_tag=YE0829
AM286415.1	EMBL	CDS	956095	957159	.	+	0	ID=cds785;Parent=gene821;Dbxref=EnsemblGenomes-Gn:YE0829,EnsemblGenomes-Tr:CAL10930,GOA:A1JK01,InterPro:IPR003593,InterPro:IPR013765,InterPro:IPR020584,InterPro:IPR020587,InterPro:IPR020588,InterPro:IPR023400,InterPro:IPR027417,NCBI_GP:CAL10930.1;Name=CAL10930.1;gbkey=CDS;gene=recA;product=RecA protein;protein_id=CAL10930.1;transl_table=11
AM286415.1	EMBL	sequence_feature	956119	957084	.	+	.	ID=id1632;Note=Pfam match to entry PF00154 recA%2C recA bacterial DNA recombination protein%2C score 801.7%2C E-value 1.8e-238;gbkey=misc_feature;gene=recA;inference=protein motif:PFAM:PF00154
AM286415.1	EMBL	sequence_feature	956293	956316	.	+	.	ID=id1633;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=recA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	956341	956364	.	+	.	ID=id1634;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=recA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	956737	956763	.	+	.	ID=id1635;Note=PS00321 recA signature.;gbkey=misc_feature;gene=recA;inference=protein motif:Prosite:PS00321
AM286415.1	EMBL	repeat_region	957420	958662	.	+	.	ID=id1636;Note=Insertion sequence elment IS1329;gbkey=repeat_region
AM286415.1	EMBL	gene	957461	957793	.	+	.	ID=gene822;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YE0831
AM286415.1	EMBL	CDS	957461	957793	.	+	0	ID=cds786;Parent=gene822;Dbxref=EnsemblGenomes-Gn:YE0831,EnsemblGenomes-Tr:CAL10931,GOA:A1JK04,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JK04,NCBI_GP:CAL10931.1;Name=CAL10931.1;Note=Previously sequenced as Yersinia enterocolitica IS1329 transposase A Trp1329A SWALL:Q9X9I2 (EMBL:AJ132945) (110 aa) fasta scores: E(): 1.8e-38%2C 100 38d in 110 aa. Also similar to Shigella dysenteriae transposase InsN for insertion sequence element IS911 SWALL:INSN_SHIDY (SWALL:P39213) (112 aa) fasta scores: E(): 7.6e-13%2C 42.45 id in 106 aa;gbkey=CDS;gene=tnpA;inference=similar to sequence:UniProtKB:P39213;product=IS1329 transposase A;protein_id=CAL10931.1;transl_table=11
AM286415.1	EMBL	sequence_feature	957494	957760	.	+	.	ID=id1637;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 56.0%2C E-value 5.5e-14;gbkey=misc_feature;gene=tnpA;inference=protein motif:PFAM:PF01527
AM286415.1	EMBL	sequence_feature	957551	957616	.	+	.	ID=id1638;Note=Predicted helix-turn-helix motif with score 1580.000%2C SD 4.57 at aa 23-44%2C sequence YPVTQAAETMNIGLSTLQRWLR;gbkey=misc_feature;gene=tnpA
AM286415.1	EMBL	gene	957883	958632	.	+	.	ID=gene823;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=YE0832
AM286415.1	EMBL	CDS	957883	958632	.	+	0	ID=cds787;Parent=gene823;Dbxref=EnsemblGenomes-Gn:YE0832,EnsemblGenomes-Tr:CAL10932,GOA:A1JK07,InterPro:IPR001584,InterPro:IPR012337,InterPro:IPR025948,UniProtKB/TrEMBL:A1JK07,NCBI_GP:CAL10932.1;Name=CAL10932.1;Note=Previously sequenced as Yersinia enterocolitica transposase B TnpB SWALL:Q9RIG3 (EMBL:AJ251581) (249 aa) fasta scores: E(): 2.3e-104%2C 99.59 38d in 249 aa. Also similar to Xanthomonas axonopodis pv. citri str. 306 ISxac3 transposase Xac0342 SWALL:AAM35234 (EMBL:AE011660) (272 aa) fasta scores: E(): 8e-37%2C 43.72 38d in 247 aa;gbkey=CDS;gene=tnpB;inference=similar to sequence:INSDC:AJ251581;product=IS1329 transposase B;protein_id=CAL10932.1;transl_table=11
AM286415.1	EMBL	sequence_feature	958129	958611	.	+	.	ID=id1639;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 131.6%2C E-value 9.2e-37;gbkey=misc_feature;gene=tnpB;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	958842	959345	.	+	.	ID=gene824;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;gene_synonym=oraA;locus_tag=YE0833
AM286415.1	EMBL	CDS	958842	959345	.	+	0	ID=cds788;Parent=gene824;Dbxref=EnsemblGenomes-Gn:YE0833,EnsemblGenomes-Tr:CAL10933,GOA:A1JK08,InterPro:IPR003783,InterPro:IPR011991,NCBI_GP:CAL10933.1;Name=CAL10933.1;gbkey=CDS;gene=recX;product=putative regulatory protein;protein_id=CAL10933.1;transl_table=11
AM286415.1	EMBL	sequence_feature	958992	959342	.	+	.	ID=id1640;Note=Pfam match to entry PF02631 RecX%2C RecX family %2Cscore 114.5%2C E-value 1.3e-31;gbkey=misc_feature;gene=recX;inference=protein motif:PFAM:PF02631
AM286415.1	EMBL	gene	959487	962114	.	+	.	ID=gene825;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;gene_synonym=lovB;locus_tag=YE0834
AM286415.1	EMBL	CDS	959487	962114	.	+	0	ID=cds789;Parent=gene825;Dbxref=EnsemblGenomes-Gn:YE0834,EnsemblGenomes-Tr:CAL10934,GOA:A1JK09,InterPro:IPR002318,InterPro:IPR003156,InterPro:IPR009000,InterPro:IPR012947,InterPro:IPR018162,InterPro:IPR018163,InterPro:IPR018164,InterPro:IPR018165,InterPro:IPR023033,NCBI_GP:CAL10934.1;Name=CAL10934.1;gbkey=CDS;gene=alaS;product=alanyl-tRNA synthetase;protein_id=CAL10934.1;transl_table=11
AM286415.1	EMBL	sequence_feature	959505	961601	.	+	.	ID=id1641;Note=Pfam match to entry PF01411 tRNA-synt_2c%2C tRNA synthetases class II (A)%2C score 1555.4%2C E-value 0;gbkey=misc_feature;gene=alaS;inference=protein motif:PFAM:PF01411
AM286415.1	EMBL	sequence_feature	960198	960227	.	+	.	ID=id1642;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=alaS;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	961881	962093	.	+	.	ID=id1643;Note=Pfam match to entry PF02272 DHHA1%2C DHHA1 domain %2Cscore 82.3%2C E-value 6.6e-22;gbkey=misc_feature;gene=alaS;inference=protein motif:PFAM:PF02272
AM286415.1	EMBL	gene	962368	962553	.	+	.	ID=gene826;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;gene_synonym=rsmA,zfiA;locus_tag=YE0835
AM286415.1	EMBL	CDS	962368	962553	.	+	0	ID=cds790;Parent=gene826;Dbxref=EnsemblGenomes-Gn:YE0835,EnsemblGenomes-Tr:CAL10935,GOA:A1JK11,InterPro:IPR003751,NCBI_GP:CAL10935.1;Name=CAL10935.1;gbkey=CDS;gene=csrA;product=carbon storage regulator;protein_id=CAL10935.1;transl_table=11
AM286415.1	EMBL	sequence_feature	962368	962541	.	+	.	ID=id1644;Note=Pfam match to entry PF02599 CsrA%2C Global regulator protein family%2C score 129.8%2C E-value 3.2e-36;gbkey=misc_feature;gene=csrA;inference=protein motif:PFAM:PF02599
AM286415.1	EMBL	gene	962917	963009	.	+	.	ID=gene827;Name=tRNA-Ser (GCT);gbkey=Gene;gene=tRNA-Ser (GCT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	962917	963009	.	+	.	ID=rna45;Parent=gene827;gbkey=tRNA;gene=tRNA-Ser (GCT);product=tRNA-Ser
AM286415.1	EMBL	exon	962917	963009	.	+	.	ID=id1645;Parent=rna45;gbkey=tRNA;gene=tRNA-Ser (GCT);product=tRNA-Ser
AM286415.1	EMBL	gene	963018	963094	.	+	.	ID=gene828;Name=tRNA-Arg (ACG);gbkey=Gene;gene=tRNA-Arg (ACG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	963018	963094	.	+	.	ID=rna46;Parent=gene828;gbkey=tRNA;gene=tRNA-Arg (ACG);product=tRNA-Arg
AM286415.1	EMBL	exon	963018	963094	.	+	.	ID=id1646;Parent=rna46;gbkey=tRNA;gene=tRNA-Arg (ACG);product=tRNA-Arg
AM286415.1	EMBL	gene	963153	963229	.	+	.	ID=gene829;Name=tRNA-Arg (ACG);gbkey=Gene;gene=tRNA-Arg (ACG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	963153	963229	.	+	.	ID=rna47;Parent=gene829;gbkey=tRNA;gene=tRNA-Arg (ACG);product=tRNA-Arg
AM286415.1	EMBL	exon	963153	963229	.	+	.	ID=id1647;Parent=rna47;gbkey=tRNA;gene=tRNA-Arg (ACG);product=tRNA-Arg
AM286415.1	EMBL	gene	963796	964362	.	+	.	ID=gene830;Name=yqaB;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=YE0836
AM286415.1	EMBL	CDS	963796	964362	.	+	0	ID=cds791;Parent=gene830;Dbxref=EnsemblGenomes-Gn:YE0836,EnsemblGenomes-Tr:CAL10936,GOA:A1JK12,InterPro:IPR006439,InterPro:IPR010976,InterPro:IPR023198,InterPro:IPR023214,UniProtKB/TrEMBL:A1JK12,NCBI_GP:CAL10936.1;Name=CAL10936.1;gbkey=CDS;gene=yqaB;product=putative hydrolase;protein_id=CAL10936.1;transl_table=11
AM286415.1	EMBL	sequence_feature	963808	964359	.	+	.	ID=id1648;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 119.7%2C E-value 3.6e-33;gbkey=misc_feature;gene=yqaB;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	964359	964787	.	+	.	ID=gene831;Name=yqaA;gbkey=Gene;gene=yqaA;gene_biotype=protein_coding;locus_tag=YE0837
AM286415.1	EMBL	CDS	964359	964787	.	+	0	ID=cds792;Parent=gene831;Dbxref=EnsemblGenomes-Gn:YE0837,EnsemblGenomes-Tr:CAL10937,InterPro:IPR015414,InterPro:IPR020143,UniProtKB/TrEMBL:A1JK13,NCBI_GP:CAL10937.1;Name=CAL10937.1;gbkey=CDS;gene=yqaA;product=putative membrane protein;protein_id=CAL10937.1;transl_table=11
AM286415.1	EMBL	sequence_feature	964377	964445	.	+	.	ID=id1649;Note=4 probable transmembrane helices predicted for YE0837 by TMHMM2.0 at aa 7-29%2C 44-66%2C 87-109 and 124-141;gbkey=misc_feature;gene=yqaA;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	964488	964556	.	+	.	ID=id1649;Note=4 probable transmembrane helices predicted for YE0837 by TMHMM2.0 at aa 7-29%2C 44-66%2C 87-109 and 124-141;gbkey=misc_feature;gene=yqaA;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	964617	964685	.	+	.	ID=id1649;Note=4 probable transmembrane helices predicted for YE0837 by TMHMM2.0 at aa 7-29%2C 44-66%2C 87-109 and 124-141;gbkey=misc_feature;gene=yqaA;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	964728	964781	.	+	.	ID=id1649;Note=4 probable transmembrane helices predicted for YE0837 by TMHMM2.0 at aa 7-29%2C 44-66%2C 87-109 and 124-141;gbkey=misc_feature;gene=yqaA;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	964870	966429	.	+	.	ID=gene832;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;gene_synonym=b2688,gsh-I;locus_tag=YE0838
AM286415.1	EMBL	CDS	964870	966429	.	+	0	ID=cds793;Parent=gene832;Dbxref=EnsemblGenomes-Gn:YE0838,EnsemblGenomes-Tr:CAL10938,GOA:A1JK14,InterPro:IPR006334,InterPro:IPR007370,NCBI_GP:CAL10938.1;Name=CAL10938.1;gbkey=CDS;gene=gshA;product=glutamate--cysteine ligase;protein_id=CAL10938.1;transl_table=11
AM286415.1	EMBL	sequence_feature	965536	965559	.	+	.	ID=id1650;Note=PS00030 Eukaryotic putative RNA-binding region RNP-1 signature.;gbkey=misc_feature;gene=gshA;inference=protein motif:Prosite:PS00030
AM286415.1	EMBL	transcript	966432	966506	.	-	.	ID=rna48;Note=SraD RNA (RF00078) as predicted by Rfam%2C score 41.44%2C positions 1 to 75;gbkey=misc_RNA
AM286415.1	EMBL	exon	966432	966506	.	-	.	ID=id1651;Parent=rna48;Note=SraD RNA (RF00078) as predicted by Rfam%2C score 41.44%2C positions 1 to 75;gbkey=misc_RNA
AM286415.1	EMBL	gene	966596	967111	.	+	.	ID=gene833;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=YE0839
AM286415.1	EMBL	CDS	966596	967111	.	+	0	ID=cds794;Parent=gene833;Dbxref=EnsemblGenomes-Gn:YE0839,EnsemblGenomes-Tr:CAL10939,GOA:A1JK16,InterPro:IPR003815,InterPro:IPR011249,NCBI_GP:CAL10939.1;Name=CAL10939.1;gbkey=CDS;gene=luxS;product=autoinducer production protein;protein_id=CAL10939.1;transl_table=11
AM286415.1	EMBL	sequence_feature	966599	967081	.	+	.	ID=id1652;Note=Pfam match to entry PF02664 LuxS%2C LuxS protein %2Cscore 385.8%2C E-value 2.9e-113;gbkey=misc_feature;gene=luxS;inference=protein motif:PFAM:PF02664
AM286415.1	EMBL	gene	967198	968478	.	-	.	ID=gene834;Name=yfjD;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;gene_synonym=b2612/b2613;locus_tag=YE0840
AM286415.1	EMBL	CDS	967198	968478	.	-	0	ID=cds795;Parent=gene834;Dbxref=EnsemblGenomes-Gn:YE0840,EnsemblGenomes-Tr:CAL10940,GOA:A1JK17,InterPro:IPR000644,InterPro:IPR002550,InterPro:IPR005170,InterPro:IPR016166,InterPro:IPR016169,UniProtKB/TrEMBL:A1JK17,NCBI_GP:CAL10940.1;Name=CAL10940.1;gbkey=CDS;gene=yfjD;product=putative membrane protein;protein_id=CAL10940.1;transl_table=11
AM286415.1	EMBL	sequence_feature	967219	967452	.	-	.	ID=id1653;Note=Pfam match to entry PF03471 CorC_HlyC%2C Transporter associated domain%2C score 90.1%2C E-value 2.9e-24;gbkey=misc_feature;gene=yfjD;inference=protein motif:PFAM:PF03471
AM286415.1	EMBL	sequence_feature	967498	967659	.	-	.	ID=id1654;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 30.3%2C E-value 3e-06;gbkey=misc_feature;gene=yfjD;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	967690	967854	.	-	.	ID=id1655;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 15.5%2C E-value 0.037;gbkey=misc_feature;gene=yfjD;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	967906	968457	.	-	.	ID=id1656;Note=Pfam match to entry PF01595 DUF21%2C Domain of unknown function DUF21%2C score 231.2%2C E-value 9.7e-67;gbkey=misc_feature;gene=yfjD;inference=protein motif:PFAM:PF01595
AM286415.1	EMBL	sequence_feature	968398	968466	.	-	.	ID=id1657;Note=4 probable transmembrane helices predicted for YE0840 by TMHMM2.0 at aa 5-27%2C 63-85%2C 90-112 and 125-147;gbkey=misc_feature;gene=yfjD;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	968224	968292	.	-	.	ID=id1657;Note=4 probable transmembrane helices predicted for YE0840 by TMHMM2.0 at aa 5-27%2C 63-85%2C 90-112 and 125-147;gbkey=misc_feature;gene=yfjD;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	968143	968211	.	-	.	ID=id1657;Note=4 probable transmembrane helices predicted for YE0840 by TMHMM2.0 at aa 5-27%2C 63-85%2C 90-112 and 125-147;gbkey=misc_feature;gene=yfjD;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	968038	968106	.	-	.	ID=id1657;Note=4 probable transmembrane helices predicted for YE0840 by TMHMM2.0 at aa 5-27%2C 63-85%2C 90-112 and 125-147;gbkey=misc_feature;gene=yfjD;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	968548	969339	.	-	.	ID=gene835;Name=corE;gbkey=Gene;gene=corE;gene_biotype=protein_coding;locus_tag=YE0841
AM286415.1	EMBL	CDS	968548	969339	.	-	0	ID=cds796;Parent=gene835;Dbxref=EnsemblGenomes-Gn:YE0841,EnsemblGenomes-Tr:CAL10941,GOA:A1JK19,InterPro:IPR002541,UniProtKB/TrEMBL:A1JK19,NCBI_GP:CAL10941.1;Name=CAL10941.1;gbkey=CDS;gene=corE;product=putative membrane protein;protein_id=CAL10941.1;transl_table=11
AM286415.1	EMBL	sequence_feature	969268	969336	.	-	.	ID=id1658;Note=8 probable transmembrane helices predicted for YE0841 by TMHMM2.0 at aa 2-24%2C 29-49%2C 62-84%2C 89-111%2C123-145%2C 175-197%2C 209-226 and 236-253;gbkey=misc_feature;gene=corE;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	969193	969255	.	-	.	ID=id1658;Note=8 probable transmembrane helices predicted for YE0841 by TMHMM2.0 at aa 2-24%2C 29-49%2C 62-84%2C 89-111%2C123-145%2C 175-197%2C 209-226 and 236-253;gbkey=misc_feature;gene=corE;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	969088	969156	.	-	.	ID=id1658;Note=8 probable transmembrane helices predicted for YE0841 by TMHMM2.0 at aa 2-24%2C 29-49%2C 62-84%2C 89-111%2C123-145%2C 175-197%2C 209-226 and 236-253;gbkey=misc_feature;gene=corE;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	969007	969075	.	-	.	ID=id1658;Note=8 probable transmembrane helices predicted for YE0841 by TMHMM2.0 at aa 2-24%2C 29-49%2C 62-84%2C 89-111%2C123-145%2C 175-197%2C 209-226 and 236-253;gbkey=misc_feature;gene=corE;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	968905	968973	.	-	.	ID=id1658;Note=8 probable transmembrane helices predicted for YE0841 by TMHMM2.0 at aa 2-24%2C 29-49%2C 62-84%2C 89-111%2C123-145%2C 175-197%2C 209-226 and 236-253;gbkey=misc_feature;gene=corE;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	968749	968817	.	-	.	ID=id1658;Note=8 probable transmembrane helices predicted for YE0841 by TMHMM2.0 at aa 2-24%2C 29-49%2C 62-84%2C 89-111%2C123-145%2C 175-197%2C 209-226 and 236-253;gbkey=misc_feature;gene=corE;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	968662	968715	.	-	.	ID=id1658;Note=8 probable transmembrane helices predicted for YE0841 by TMHMM2.0 at aa 2-24%2C 29-49%2C 62-84%2C 89-111%2C123-145%2C 175-197%2C 209-226 and 236-253;gbkey=misc_feature;gene=corE;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	968581	968634	.	-	.	ID=id1658;Note=8 probable transmembrane helices predicted for YE0841 by TMHMM2.0 at aa 2-24%2C 29-49%2C 62-84%2C 89-111%2C123-145%2C 175-197%2C 209-226 and 236-253;gbkey=misc_feature;gene=corE;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	969505	970866	.	+	.	ID=gene836;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=YE0842
AM286415.1	EMBL	CDS	969505	970866	.	+	0	ID=cds797;Parent=gene836;Dbxref=EnsemblGenomes-Gn:YE0842,EnsemblGenomes-Tr:CAL10942,GOA:A1JK20,InterPro:IPR000897,InterPro:IPR003593,InterPro:IPR004125,InterPro:IPR004780,InterPro:IPR013822,InterPro:IPR022941,InterPro:IPR027417,UniProtKB/TrEMBL:A1JK20,NCBI_GP:CAL10942.1;Name=CAL10942.1;gbkey=CDS;gene=ffh;product=signal recognition particle protein;protein_id=CAL10942.1;transl_table=11
AM286415.1	EMBL	sequence_feature	969505	969765	.	+	.	ID=id1659;Note=Pfam match to entry PF02881 SRP54_N%2C SRP54-type protein%2C helical bundle domain%2C score 120.2%2C E-value 2.6e-33;gbkey=misc_feature;gene=ffh;inference=protein motif:PFAM:PF02881
AM286415.1	EMBL	sequence_feature	969796	970395	.	+	.	ID=id1660;Note=Pfam match to entry PF00448 SRP54%2C SRP54-type protein%2C GTPase domain%2C score 402.3%2C E-value 3.1e-118;gbkey=misc_feature;gene=ffh;inference=protein motif:PFAM:PF00448
AM286415.1	EMBL	sequence_feature	969823	969846	.	+	.	ID=id1661;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ffh;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	970222	970239	.	+	.	ID=id1662;Note=PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide.;gbkey=misc_feature;gene=ffh;inference=protein motif:Prosite:PS00343
AM286415.1	EMBL	sequence_feature	970309	970350	.	+	.	ID=id1663;Note=PS00300 SRP54-type proteins GTP-binding domain signature.;gbkey=misc_feature;gene=ffh;inference=protein motif:Prosite:PS00300
AM286415.1	EMBL	sequence_feature	970486	970785	.	+	.	ID=id1664;Note=Pfam match to entry PF02978 SRP_SPB%2C Signal peptide binding domain%2C score 171.8%2C E-value 7.2e-49;gbkey=misc_feature;gene=ffh;inference=protein motif:PFAM:PF02978
AM286415.1	EMBL	gene	971219	971467	.	+	.	ID=gene837;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=YE0843
AM286415.1	EMBL	CDS	971219	971467	.	+	0	ID=cds798;Parent=gene837;Dbxref=EnsemblGenomes-Gn:YE0843,EnsemblGenomes-Tr:CAL10943,GOA:A1JK22,InterPro:IPR000307,InterPro:IPR020592,InterPro:IPR023803,NCBI_GP:CAL10943.1;Name=CAL10943.1;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=CAL10943.1;transl_table=11
AM286415.1	EMBL	sequence_feature	971222	971251	.	+	.	ID=id1665;Note=PS00732 Ribosomal protein S16 signature.;gbkey=misc_feature;gene=rpsP;inference=protein motif:Prosite:PS00732
AM286415.1	EMBL	sequence_feature	971240	971422	.	+	.	ID=id1666;Note=Pfam match to entry PF00886 Ribosomal_S16%2CRibosomal protein S16%2C score 119.0%2C E-value 5.9e-33;gbkey=misc_feature;gene=rpsP;inference=protein motif:PFAM:PF00886
AM286415.1	EMBL	gene	971489	972037	.	+	.	ID=gene838;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=YE0844
AM286415.1	EMBL	CDS	971489	972037	.	+	0	ID=cds799;Parent=gene838;Dbxref=EnsemblGenomes-Gn:YE0844,EnsemblGenomes-Tr:CAL10944,GOA:A1JK24,InterPro:IPR002676,InterPro:IPR009000,InterPro:IPR011033,InterPro:IPR011961,InterPro:IPR027275,NCBI_GP:CAL10944.1;Name=CAL10944.1;gbkey=CDS;gene=rimM;product=16S rRNA processing protein;protein_id=CAL10944.1;transl_table=11
AM286415.1	EMBL	sequence_feature	971531	972034	.	+	.	ID=id1667;Note=Pfam match to entry PF01782 RimM%2C RimM%2C score 295.6%2C E-value 4e-86;gbkey=misc_feature;gene=rimM;inference=protein motif:PFAM:PF01782
AM286415.1	EMBL	gene	972076	972816	.	+	.	ID=gene839;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=YE0845
AM286415.1	EMBL	CDS	972076	972816	.	+	0	ID=cds800;Parent=gene839;Dbxref=EnsemblGenomes-Gn:YE0845,EnsemblGenomes-Tr:CAL10945,GOA:A1JK25,InterPro:IPR002649,InterPro:IPR016009,InterPro:IPR023148,InterPro:IPR029026,InterPro:IPR029028,NCBI_GP:CAL10945.1;Name=CAL10945.1;gbkey=CDS;gene=trmD;product=tRNA (guanine-N1)-methyltransferase;protein_id=CAL10945.1;transl_table=11
AM286415.1	EMBL	sequence_feature	972139	972768	.	+	.	ID=id1668;Note=Pfam match to entry PF01746 tRNA_m1G_MT%2C tRNA (Guanine-1)-methyltransferase%2C score 483.8%2C E-value 8.8e-143;gbkey=misc_feature;gene=trmD;inference=protein motif:PFAM:PF01746
AM286415.1	EMBL	gene	972897	973259	.	+	.	ID=gene840;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=YE0846
AM286415.1	EMBL	CDS	972897	973259	.	+	0	ID=cds801;Parent=gene840;Dbxref=EnsemblGenomes-Gn:YE0846,EnsemblGenomes-Tr:CAL10946,GOA:A1JK26,InterPro:IPR001857,InterPro:IPR008991,InterPro:IPR018257,NCBI_GP:CAL10946.1;Name=CAL10946.1;gbkey=CDS;gene=rplS;product=50S ribosomal protein L19;protein_id=CAL10946.1;transl_table=11
AM286415.1	EMBL	sequence_feature	972900	973238	.	+	.	ID=id1669;Note=Pfam match to entry PF01245 Ribosomal_L19%2CRibosomal protein L19%2C score 265.0%2C E-value 6.7e-77;gbkey=misc_feature;gene=rplS;inference=protein motif:PFAM:PF01245
AM286415.1	EMBL	gene	973467	974234	.	-	.	ID=gene841;Name=ydiY;gbkey=Gene;gene=ydiY;gene_biotype=protein_coding;locus_tag=YE0847
AM286415.1	EMBL	CDS	973467	974234	.	-	0	ID=cds802;Parent=gene841;Dbxref=EnsemblGenomes-Gn:YE0847,EnsemblGenomes-Tr:CAL10947,InterPro:IPR007433,UniProtKB/TrEMBL:A1JK27,NCBI_GP:CAL10947.1;Name=CAL10947.1;gbkey=CDS;gene=ydiY;product=putative exported protein;protein_id=CAL10947.1;transl_table=11
AM286415.1	EMBL	gene	974471	975814	.	-	.	ID=gene842;Name=YE0848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0848
AM286415.1	EMBL	CDS	974471	975814	.	-	0	ID=cds803;Parent=gene842;Dbxref=EnsemblGenomes-Gn:YE0848,EnsemblGenomes-Tr:CAL10948,GOA:A1JK28,InterPro:IPR004668,UniProtKB/TrEMBL:A1JK28,NCBI_GP:CAL10948.1;Name=CAL10948.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 anaerobic C4-dicarboxylate transporter DcuB or z5725 or ecs5105 SWALL:DCUB_ECOLI (SWALL:P14409) (446 aa) fasta scores: E(): 2.5e-99%2C 56.72 38d in 446 aa%2C and to Salmonella typhimurium Dcu family%2C anaerobic c4-dicarboxylate transporter dcub or stm4301 SWALL:Q8ZKE1 (EMBL:AE008902) (446 aa) fasta scores: E(): 1.4e-98%2C56.05 38d in 446 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P14409;product=putative anaerobic C4-dicarboxylate transporter;protein_id=CAL10948.1;transl_table=11
AM286415.1	EMBL	sequence_feature	975692	975760	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	975596	975664	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	975467	975535	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	975341	975409	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	975239	975307	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	975044	975112	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	974942	975010	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	974831	974899	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	974702	974770	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	974606	974674	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	974477	974545	.	-	.	ID=id1670;Note=11 probable transmembrane helices predicted for YE0848 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C170-192%2C 235-257%2C 269-291%2C 306-328%2C 349-371%2C 381-403 and 424-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	974507	974539	.	-	.	ID=id1671;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	974678	975802	.	-	.	ID=id1672;Note=Pfam match to entry PF03605 Dcu%2C Anaerobic c4-dicarboxylate membrane transporter%2C score 661.3%2CE-value 3.2e-196;gbkey=misc_feature;inference=protein motif:PFAM:PF03605
AM286415.1	EMBL	sequence_feature	974942	974974	.	-	.	ID=id1673;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	975635	975667	.	-	.	ID=id1674;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	976157	976873	.	-	.	ID=gene843;Name=YE0849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0849
AM286415.1	EMBL	CDS	976157	976873	.	-	0	ID=cds804;Parent=gene843;Dbxref=EnsemblGenomes-Gn:YE0849,EnsemblGenomes-Tr:CAL10949,GOA:A1JK31,InterPro:IPR001789,InterPro:IPR007492,InterPro:IPR011006,UniProtKB/TrEMBL:A1JK31,NCBI_GP:CAL10949.1;Name=CAL10949.1;gbkey=CDS;product=two-component system response regulator;protein_id=CAL10949.1;transl_table=11
AM286415.1	EMBL	sequence_feature	976514	976870	.	-	.	ID=id1675;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 126.6%2C E-value 3e-35;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	977108	978187	.	+	.	ID=gene844;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=YE0850
AM286415.1	EMBL	CDS	977108	978187	.	+	0	ID=cds805;Parent=gene844;Dbxref=EnsemblGenomes-Gn:YE0850,EnsemblGenomes-Tr:CAL10950,GOA:A1JK32,InterPro:IPR006218,InterPro:IPR006219,InterPro:IPR013785,UniProtKB/TrEMBL:A1JK32,NCBI_GP:CAL10950.1;Name=CAL10950.1;gbkey=CDS;gene=aroF;product=phospho-2-dehydro-3-deoxyheptonate aldolase%2Ctyr-sensitive;protein_id=CAL10950.1;transl_table=11
AM286415.1	EMBL	sequence_feature	977171	978151	.	+	.	ID=id1676;Note=Pfam match to entry PF00793 DAHP_synth_1%2C DAHP synthetase I family%2C score 537.5%2C E-value 5.9e-159;gbkey=misc_feature;gene=aroF;inference=protein motif:PFAM:PF00793
AM286415.1	EMBL	gene	978190	979311	.	+	.	ID=gene845;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=YE0851
AM286415.1	EMBL	CDS	978190	979311	.	+	0	ID=cds806;Parent=gene845;Dbxref=EnsemblGenomes-Gn:YE0851,EnsemblGenomes-Tr:CAL10951,GOA:A1JK33,InterPro:IPR002701,InterPro:IPR003099,InterPro:IPR008244,InterPro:IPR008927,InterPro:IPR011277,InterPro:IPR016040,InterPro:IPR020822,UniProtKB/TrEMBL:A1JK33,NCBI_GP:CAL10951.1;Name=CAL10951.1;gbkey=CDS;gene=tyrA;product=T-protein [includes: chorismate mutase and prephenate dehydrogenase];protein_id=CAL10951.1;transl_table=11
AM286415.1	EMBL	sequence_feature	978190	978450	.	+	.	ID=id1677;Note=Pfam match to entry PF01817 Chorismate_mut%2CChorismate mutase%2C score 106.7%2C E-value 2.9e-29;gbkey=misc_feature;gene=tyrA;inference=protein motif:PFAM:PF01817
AM286415.1	EMBL	sequence_feature	978499	979239	.	+	.	ID=id1678;Note=Pfam match to entry PF02153 PDH%2C Prephenate dehydrogenase%2C score 90.4%2C E-value 2.3e-24;gbkey=misc_feature;gene=tyrA;inference=protein motif:PFAM:PF02153
AM286415.1	EMBL	gene	979671	980828	.	-	.	ID=gene846;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=YE0852
AM286415.1	EMBL	CDS	979671	980828	.	-	0	ID=cds807;Parent=gene846;Dbxref=EnsemblGenomes-Gn:YE0852,EnsemblGenomes-Tr:CAL10952,GOA:A1JK34,InterPro:IPR001086,InterPro:IPR002701,InterPro:IPR002912,InterPro:IPR008242,InterPro:IPR010952,InterPro:IPR018528,InterPro:IPR020822,UniProtKB/TrEMBL:A1JK34,NCBI_GP:CAL10952.1;Name=CAL10952.1;gbkey=CDS;gene=pheA;product=P-protein [includes: chorismate mutase and prephenate dehydratase];protein_id=CAL10952.1;transl_table=11
AM286415.1	EMBL	sequence_feature	979836	979859	.	-	.	ID=id1679;Note=PS00858 Prephenate dehydratase signature 2.;gbkey=misc_feature;gene=pheA;inference=protein motif:Prosite:PS00858
AM286415.1	EMBL	sequence_feature	979968	980516	.	-	.	ID=id1680;Note=Pfam match to entry PF00800 PDT%2C Prephenate dehydratase%2C score 330.1%2C E-value 1.6e-96;gbkey=misc_feature;gene=pheA;inference=protein motif:PFAM:PF00800
AM286415.1	EMBL	sequence_feature	979983	980051	.	-	.	ID=id1681;Note=PS00857 Prephenate dehydratase signature 1.;gbkey=misc_feature;gene=pheA;inference=protein motif:Prosite:PS00857
AM286415.1	EMBL	sequence_feature	980565	980828	.	-	.	ID=id1682;Note=Pfam match to entry PF01817 Chorismate_mut%2CChorismate mutase%2C score 95.8%2C E-value 5.5e-26;gbkey=misc_feature;gene=pheA;inference=protein motif:PFAM:PF01817
AM286415.1	EMBL	repeat_region	981208	981230	.	-	.	ID=id1683;Note=Direct repeat flanking prophage%2C 23mer;gbkey=repeat_region
AM286415.1	EMBL	sequence_feature	981231	1012602	.	-	.	ID=id1684;Note=YE98 prophage%3B Similar to Haemophilus phage HPI;gbkey=misc_feature
AM286415.1	EMBL	gene	981320	982318	.	-	.	ID=gene847;Name=int;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=YE0853
AM286415.1	EMBL	CDS	981320	982318	.	-	0	ID=cds808;Parent=gene847;Dbxref=EnsemblGenomes-Gn:YE0853,EnsemblGenomes-Tr:CAL10953,GOA:A1JK36,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB/TrEMBL:A1JK36,NCBI_GP:CAL10953.1;Name=CAL10953.1;Note=Similar to Bacteriophage P2 Integrase Int SWALL:VINT_BPP2 (SWALL:P36932) (337 aa) fasta scores: E(): 8.2e-72%2C 54.62 38d in 335 aa and to Bacteriophage 186 Integrase Int SWALL:VINT_BP186 (SWALL:P06723) (336 aa) fasta scores: E(): 1.9e-32%2C 38.57 38d in 337 aa;gbkey=CDS;gene=int;inference=similar to sequence:UniProtKB:P36932;product=integrase;protein_id=CAL10953.1;transl_table=11
AM286415.1	EMBL	sequence_feature	981380	981826	.	-	.	ID=id1685;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 115.0%2C E-value 9.3e-32;gbkey=misc_feature;gene=int;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	982385	982684	.	-	.	ID=gene848;Name=CI;gbkey=Gene;gene=CI;gene_biotype=protein_coding;locus_tag=YE0854
AM286415.1	EMBL	CDS	982385	982684	.	-	0	ID=cds809;Parent=gene848;Dbxref=EnsemblGenomes-Gn:YE0854,EnsemblGenomes-Tr:CAL10954,GOA:A1JK37,InterPro:IPR001387,InterPro:IPR010982,UniProtKB/TrEMBL:A1JK37,NCBI_GP:CAL10954.1;Name=CAL10954.1;Note=Similar to Bacteriophage P2 repressor protein repressor C SWALL:RPC_BPP2 (SWALL:P04132) (99 aa) fasta scores: E(): 3.5e-12%2C 42.42 38d in 99 aa and to Bacteriophage WPhi repressor protein C SWALL:Q9T1J6 (EMBL:AJ245959) (97 aa) fasta scores: E(): 2.2e-09%2C 43.01 id in 93 aa;gbkey=CDS;gene=CI;inference=similar to sequence:UniProtKB:P04132;product=bacteriophage CI repressor protein;protein_id=CAL10954.1;transl_table=11
AM286415.1	EMBL	gene	982793	983149	.	+	.	ID=gene849;Name=cox;gbkey=Gene;gene=cox;gene_biotype=protein_coding;locus_tag=YE0855
AM286415.1	EMBL	CDS	982793	983149	.	+	0	ID=cds810;Parent=gene849;Dbxref=EnsemblGenomes-Gn:YE0855,EnsemblGenomes-Tr:CAL10955,InterPro:IPR019679,UniProtKB/TrEMBL:A1JK39,NCBI_GP:CAL10955.1;Name=CAL10955.1;Note=Similar to Bacteriophage P2 regulatory protein Cox SWALL:VCOX_BPP2 (SWALL:P07695) (91 aa) fasta scores: E(): 0.0021%2C 32.14 38d in 84 aa;gbkey=CDS;gene=cox;inference=similar to sequence:UniProtKB:P07695;product=bacteriophage regulatory protein;protein_id=CAL10955.1;transl_table=11
AM286415.1	EMBL	gene	983146	983388	.	+	.	ID=gene850;Name=YE0856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0856
AM286415.1	EMBL	CDS	983146	983388	.	+	0	ID=cds811;Parent=gene850;Dbxref=EnsemblGenomes-Gn:YE0856,EnsemblGenomes-Tr:CAL10956,UniProtKB/TrEMBL:A1JK40,NCBI_GP:CAL10956.1;Name=CAL10956.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL10956.1;transl_table=11
AM286415.1	EMBL	gene	983455	983820	.	+	.	ID=gene851;Name=YE0857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0857
AM286415.1	EMBL	CDS	983455	983820	.	+	0	ID=cds812;Parent=gene851;Dbxref=EnsemblGenomes-Gn:YE0857,EnsemblGenomes-Tr:CAL10957,UniProtKB/TrEMBL:A1JK42,NCBI_GP:CAL10957.1;Name=CAL10957.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL10957.1;transl_table=11
AM286415.1	EMBL	gene	983849	984070	.	+	.	ID=gene852;Name=YE0857A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0857A
AM286415.1	EMBL	CDS	983849	984070	.	+	0	ID=cds813;Parent=gene852;Dbxref=EnsemblGenomes-Gn:YE0857A,EnsemblGenomes-Tr:CAL10958,UniProtKB/TrEMBL:A1JK43,NCBI_GP:CAL10958.1;Name=CAL10958.1;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL10958.1;transl_table=11
AM286415.1	EMBL	gene	984079	984429	.	+	.	ID=gene853;Name=YE0858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0858
AM286415.1	EMBL	CDS	984079	984429	.	+	0	ID=cds814;Parent=gene853;Dbxref=EnsemblGenomes-Gn:YE0858,EnsemblGenomes-Tr:CAL10959,UniProtKB/TrEMBL:A1JK45,NCBI_GP:CAL10959.1;Name=CAL10959.1;Note=Weakly similar to Salmonella typhi hypothetical protein Sty3664 SWALL:Q8Z369 (EMBL:AL627279) (113 aa) fasta scores: E(): 1.7e-06%2C 32.72 38d in 110 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627279;product=hypothetical phage-related protein;protein_id=CAL10959.1;transl_table=11
AM286415.1	EMBL	gene	984491	984736	.	+	.	ID=gene854;Name=YE0859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0859
AM286415.1	EMBL	CDS	984491	984736	.	+	0	ID=cds815;Parent=gene854;Dbxref=EnsemblGenomes-Gn:YE0859,EnsemblGenomes-Tr:CAL10960,UniProtKB/TrEMBL:A1JK46,NCBI_GP:CAL10960.1;Name=CAL10960.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL10960.1;transl_table=11
AM286415.1	EMBL	gene	984736	985404	.	+	.	ID=gene855;Name=YE0860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0860
AM286415.1	EMBL	CDS	984736	985404	.	+	0	ID=cds816;Parent=gene855;Dbxref=EnsemblGenomes-Gn:YE0860,EnsemblGenomes-Tr:CAL10961,InterPro:IPR007374,InterPro:IPR015947,UniProtKB/TrEMBL:A1JK47,NCBI_GP:CAL10961.1;Name=CAL10961.1;Note=no significant database hits;gbkey=CDS;product=putative exported phage-related protein;protein_id=CAL10961.1;transl_table=11
AM286415.1	EMBL	gene	985388	985768	.	+	.	ID=gene856;Name=YE0860A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0860A
AM286415.1	EMBL	CDS	985388	985768	.	+	0	ID=cds817;Parent=gene856;Dbxref=EnsemblGenomes-Gn:YE0860A,EnsemblGenomes-Tr:CAL10962,UniProtKB/TrEMBL:A1JK49,NCBI_GP:CAL10962.1;Name=CAL10962.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL10962.1;transl_table=11
AM286415.1	EMBL	gene	985765	988350	.	+	.	ID=gene857;Name=gpA;gbkey=Gene;gene=gpA;gene_biotype=protein_coding;locus_tag=YE0861
AM286415.1	EMBL	CDS	985765	988350	.	+	0	ID=cds818;Parent=gene857;Dbxref=EnsemblGenomes-Gn:YE0861,EnsemblGenomes-Tr:CAL10963,GOA:A1JK50,InterPro:IPR008766,UniProtKB/TrEMBL:A1JK50,NCBI_GP:CAL10963.1;Name=CAL10963.1;Note=Similar to Salmonella typhi possible endonuclease Sty3668 SWALL:Q8Z365 (EMBL:AL627279) (804 aa) fasta scores: E(): 1.6e-90%2C 43.34 38d in 819 aa;gbkey=CDS;gene=gpA;inference=similar to sequence:INSDC:AL627279;product=phage replication protein (endonuclease);protein_id=CAL10963.1;transl_table=11
AM286415.1	EMBL	gene	988354	988602	.	+	.	ID=gene858;Name=YE0862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0862
AM286415.1	EMBL	CDS	988354	988602	.	+	0	ID=cds819;Parent=gene858;Dbxref=EnsemblGenomes-Gn:YE0862,EnsemblGenomes-Tr:CAL10964,UniProtKB/TrEMBL:A1JK52,NCBI_GP:CAL10964.1;Name=CAL10964.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL10964.1;transl_table=11
AM286415.1	EMBL	sequence_feature	988697	990632	.	+	.	ID=id1686;Note=Low G+C region;gbkey=misc_feature
AM286415.1	EMBL	gene	988741	989850	.	+	.	ID=gene859;Name=YE0863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0863
AM286415.1	EMBL	CDS	988741	989850	.	+	0	ID=cds820;Parent=gene859;Dbxref=EnsemblGenomes-Gn:YE0863,EnsemblGenomes-Tr:CAL10965,UniProtKB/TrEMBL:A1JK53,NCBI_GP:CAL10965.1;Name=CAL10965.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related membrane protein;protein_id=CAL10965.1;transl_table=11
AM286415.1	EMBL	sequence_feature	988774	988842	.	+	.	ID=id1687;Note=4 probable transmembrane helices predicted for YE0863 by TMHMM2.0 at aa 12-34%2C 123-145%2C 217-239 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	989107	989175	.	+	.	ID=id1687;Note=4 probable transmembrane helices predicted for YE0863 by TMHMM2.0 at aa 12-34%2C 123-145%2C 217-239 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	989389	989457	.	+	.	ID=id1687;Note=4 probable transmembrane helices predicted for YE0863 by TMHMM2.0 at aa 12-34%2C 123-145%2C 217-239 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	989500	989568	.	+	.	ID=id1687;Note=4 probable transmembrane helices predicted for YE0863 by TMHMM2.0 at aa 12-34%2C 123-145%2C 217-239 and 254-276;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	989892	990536	.	+	.	ID=gene860;Name=YE0864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0864
AM286415.1	EMBL	CDS	989892	990536	.	+	0	ID=cds821;Parent=gene860;Dbxref=EnsemblGenomes-Gn:YE0864,EnsemblGenomes-Tr:CAL10966,UniProtKB/TrEMBL:A1JK54,NCBI_GP:CAL10966.1;Name=CAL10966.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related membrane protein;protein_id=CAL10966.1;transl_table=11
AM286415.1	EMBL	sequence_feature	989946	990014	.	+	.	ID=id1688;Note=3 probable transmembrane helices predicted for YE0864 by TMHMM2.0 at aa 19-41%2C 46-68 and 186-208;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	990027	990095	.	+	.	ID=id1688;Note=3 probable transmembrane helices predicted for YE0864 by TMHMM2.0 at aa 19-41%2C 46-68 and 186-208;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	990447	990515	.	+	.	ID=id1688;Note=3 probable transmembrane helices predicted for YE0864 by TMHMM2.0 at aa 19-41%2C 46-68 and 186-208;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	990587	990916	.	-	.	ID=gene861;Name=YE0865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0865
AM286415.1	EMBL	CDS	990587	990916	.	-	0	ID=cds822;Parent=gene861;Dbxref=EnsemblGenomes-Gn:YE0865,EnsemblGenomes-Tr:CAL10967,InterPro:IPR007684,UniProtKB/TrEMBL:A1JK55,NCBI_GP:CAL10967.1;Name=CAL10967.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL10967.1;transl_table=11
AM286415.1	EMBL	gene	990920	992017	.	-	.	ID=gene862;Name=gpQ;gbkey=Gene;gene=gpQ;gene_biotype=protein_coding;locus_tag=YE0866
AM286415.1	EMBL	CDS	990920	992017	.	-	0	ID=cds823;Parent=gene862;Dbxref=EnsemblGenomes-Gn:YE0866,EnsemblGenomes-Tr:CAL10968,InterPro:IPR006430,InterPro:IPR006944,UniProtKB/TrEMBL:A1JK56,NCBI_GP:CAL10968.1;Name=CAL10968.1;Note=Similar to Bacteriophage P2 presumed portal vertex protein Q SWALL:VPQ_BPP2 (SWALL:P25480) (344 aa) fasta scores: E(): 1.5e-27%2C 32.08 38d in 321 aa and Bacteriophage HP1 probable portal protein SWALL:VPQ_BPHP1 (SWALL:P51717) (345 aa) fasta scores: E(): 2.5e-62%2C 52.26 id in 331 aa;gbkey=CDS;gene=gpQ;inference=similar to sequence:UniProtKB:P51717;product=putative portal vertex protein;protein_id=CAL10968.1;transl_table=11
AM286415.1	EMBL	gene	991698	993875	.	-	.	ID=gene863;Name=gpP;gbkey=Gene;gene=gpP;gene_biotype=protein_coding;locus_tag=YE0867
AM286415.1	EMBL	CDS	991698	993875	.	-	0	ID=cds824;Parent=gene863;Dbxref=EnsemblGenomes-Gn:YE0867,EnsemblGenomes-Tr:CAL10969,GOA:A1JK57,InterPro:IPR001610,InterPro:IPR004921,InterPro:IPR010332,UniProtKB/TrEMBL:A1JK57,NCBI_GP:CAL10969.1;Name=CAL10969.1;Note=Similar to Bacteriophage P2 terminase%2C ATPase subunit P SWALL:VPP_BPP2 (SWALL:P25479) (590 aa) fasta scores: E(): 5.1e-75%2C 39.18 38d in 592 aa and to Bacteriophage HP1 probable terminase%2C ATPase subunit SWALL:VPP_BPHP1 (SWALL:P51718) (607 aa) fasta scores: E(): 1.5e-90%2C 45.82 38d in 611 aa. Note the extended lenght of the product of this CDS and the resultant overlap with the downstream CDS;gbkey=CDS;gene=gpP;inference=similar to sequence:UniProtKB:P51718;product=terminase%2C ATPase subunit;protein_id=CAL10969.1;transl_table=11
AM286415.1	EMBL	sequence_feature	993744	993809	.	-	.	ID=id1689;Note=Predicted helix-turn-helix motif with score 1096.000%2C SD 2.92 at aa 23-44%2C sequence WTAQEIAAELNLNSTRIVYYWA;gbkey=misc_feature;gene=gpP
AM286415.1	EMBL	gene	994053	995009	.	+	.	ID=gene864;Name=gpO;gbkey=Gene;gene=gpO;gene_biotype=protein_coding;locus_tag=YE0868
AM286415.1	EMBL	CDS	994053	995009	.	+	0	ID=cds825;Parent=gene864;Dbxref=EnsemblGenomes-Gn:YE0868,EnsemblGenomes-Tr:CAL10970,GOA:A1JK58,InterPro:IPR009228,UniProtKB/TrEMBL:A1JK58,NCBI_GP:CAL10970.1;Name=CAL10970.1;Note=Similar to Bacteriophage HP1 probable capsid scaffolding protein SWALL:VPO_BPHP1 (SWALL:P51719) (298 aa) fasta scores: E(): 1.4e-21%2C 37.18 38d in 320 aa%2C and to Bacteriophage P2 presumed capsid scaffolding protein O SWALL:VPO_BPP2 (SWALL:P25478) (284 aa) fasta scores: E(): 8.2e-05%2C 32.52 38d in 289 aa;gbkey=CDS;gene=gpO;inference=similar to sequence:UniProtKB:P51719;product=probable capsid scaffolding protein;protein_id=CAL10970.1;transl_table=11
AM286415.1	EMBL	gene	995092	996258	.	+	.	ID=gene865;Name=gpN;gbkey=Gene;gene=gpN;gene_biotype=protein_coding;locus_tag=YE0869
AM286415.1	EMBL	CDS	995092	996258	.	+	0	ID=cds826;Parent=gene865;Dbxref=EnsemblGenomes-Gn:YE0869,EnsemblGenomes-Tr:CAL10971,GOA:A1JK59,InterPro:IPR006441,UniProtKB/TrEMBL:A1JK59,NCBI_GP:CAL10971.1;Name=CAL10971.1;Note=Similar to Bacteriophage P2 major capsid protein precursor N SWALL:VPN_BPP2 (SWALL:P25477) (357 aa) fasta scores: E(): 0.0021%2C 23.82 38d in 319 aa%2C and to Bacteriophage HP1 major capsid protein precursor SWALL:VPN_BPHP1 (SWALL:P51720) (336 aa) fasta scores: E(): 6.8e-06%2C 28.35 38d in 328 aa;gbkey=CDS;gene=gpN;inference=similar to sequence:UniProtKB:P51720;product=major capsid protein precursor;protein_id=CAL10971.1;transl_table=11
AM286415.1	EMBL	gene	996273	996926	.	+	.	ID=gene866;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=YE0870
AM286415.1	EMBL	CDS	996273	996926	.	+	0	ID=cds827;Parent=gene866;Dbxref=EnsemblGenomes-Gn:YE0870,EnsemblGenomes-Tr:CAL10972,GOA:A1JK60,InterPro:IPR010270,UniProtKB/TrEMBL:A1JK60,NCBI_GP:CAL10972.1;Name=CAL10972.1;Note=Similar to Bacteriophage HP1 probable terminase%2Cendonuclease subunit SWALL:VPM_BPHP1 (SWALL:P51721) (281 aa) fasta scores: E(): 3.1e-11%2C 32.48 38d in 237 aa%2C and to Bacteriophage P2 terminase%2C endonuclease subunit M SWALL:VPM_BPP2 (SWALL:P25476) (247 aa) fasta scores: E(): 0.0042%2C 28.31 38d in 226 aa;gbkey=CDS;gene=gpM;inference=similar to sequence:UniProtKB:P51721;product=probable terminase%2C endonuclease subunit;protein_id=CAL10972.1;transl_table=11
AM286415.1	EMBL	gene	997060	997512	.	+	.	ID=gene867;Name=gpL;gbkey=Gene;gene=gpL;gene_biotype=protein_coding;locus_tag=YE0871
AM286415.1	EMBL	CDS	997060	997512	.	+	0	ID=cds828;Parent=gene867;Dbxref=EnsemblGenomes-Gn:YE0871,EnsemblGenomes-Tr:CAL10973,GOA:A1JK61,InterPro:IPR009225,UniProtKB/TrEMBL:A1JK61,NCBI_GP:CAL10973.1;Name=CAL10973.1;Note=Similar to Bacteriophage P2 head completion/stabilization protein L SWALL:VPL_BPP2 (SWALL:P25475) (169 aa) fasta scores: E(): 0.03%2C 22.14 38d in 149 aa%2C Bacteriophage SWALL:Q8W748 (EMBL:AF125163) (153 aa) fasta scores: E(): 9.3e-18%2C 35.29 38d in 153 aa%2Cand to Bacteriophage HP1 probable head completion/stabilization protein SWALL:VPL_BPHP1 (SWALL:P51722) (150 aa) fasta scores: E(): 7.6e-15%2C 35.33 id in 150 aa;gbkey=CDS;gene=gpL;inference=similar to sequence:UniProtKB:P51722;product=head completion/stabilization protein;protein_id=CAL10973.1;transl_table=11
AM286415.1	EMBL	sequence_feature	997429	997476	.	+	.	ID=id1690;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature.;gbkey=misc_feature;gene=gpL;inference=protein motif:Prosite:PS00038
AM286415.1	EMBL	gene	997509	998045	.	+	.	ID=gene868;Name=YE0871A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0871A
AM286415.1	EMBL	CDS	997509	998045	.	+	0	ID=cds829;Parent=gene868;Dbxref=EnsemblGenomes-Gn:YE0871A,EnsemblGenomes-Tr:CAL10974,InterPro:IPR009678,UniProtKB/TrEMBL:A1JK63,NCBI_GP:CAL10974.1;Name=CAL10974.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL10974.1;transl_table=11
AM286415.1	EMBL	gene	998035	998730	.	+	.	ID=gene869;Name=YE0872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0872
AM286415.1	EMBL	CDS	998035	998730	.	+	0	ID=cds830;Parent=gene869;Dbxref=EnsemblGenomes-Gn:YE0872,EnsemblGenomes-Tr:CAL10975,UniProtKB/TrEMBL:A1JK64,NCBI_GP:CAL10975.1;Name=CAL10975.1;Note=Similar to Bacteriophage HP1 hypothetical protein SWALL:YO22_BPHP1 (SWALL:P51724) (227 aa) fasta scores: E(): 3.8e-09%2C 29.95 38d in 227 aa%2C and to Haemophilus phage HP2 Orf22 SWALL:Q94MZ0 (EMBL:AY027935) (231 aa) fasta scores: E(): 8.3e-06%2C 29.03 38d in 217 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51724;product=hypothetical phage-related protein;protein_id=CAL10975.1;transl_table=11
AM286415.1	EMBL	gene	998727	999905	.	+	.	ID=gene870;Name=YE0873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0873
AM286415.1	EMBL	CDS	998727	999905	.	+	0	ID=cds831;Parent=gene870;Dbxref=EnsemblGenomes-Gn:YE0873,EnsemblGenomes-Tr:CAL10976,InterPro:IPR019694,UniProtKB/TrEMBL:A1JK65,NCBI_GP:CAL10976.1;Name=CAL10976.1;Note=Similar to Bacteriophage HP1 putative tail sheath protein SWALL:YO23_BPHP1 (SWALL:P51725) (376 aa) fasta scores: E(): 7.1e-48%2C 48.95 38d in 384 aa and to Haemophilus phage HP2 Orf23 SWALL:Q94MY9 (EMBL:AY027935) (376 aa) fasta scores: E(): 2.6e-48%2C 48.95 38d in 384 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51725;product=putative tail sheath protein;protein_id=CAL10976.1;transl_table=11
AM286415.1	EMBL	gene	999907	1000365	.	+	.	ID=gene871;Name=YE0874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0874
AM286415.1	EMBL	CDS	999907	1000365	.	+	0	ID=cds832;Parent=gene871;Dbxref=EnsemblGenomes-Gn:YE0874,EnsemblGenomes-Tr:CAL10977,InterPro:IPR019708,UniProtKB/TrEMBL:A1JK66,NCBI_GP:CAL10977.1;Name=CAL10977.1;Note=Similar to Bacteriophage HP1 putative tail tube protein SWALL:YO24_BPHP1 (SWALL:P51726) (150 aa) fasta scores: E(): 8.9e-29%2C 54.05 38d in 148 aa%2C and to Haemophilus phage HP2 Orf24 SWALL:Q94MY8 (EMBL:AY027935) (144 aa) fasta scores: E(): 1.4e-27%2C 53.84 38d in 143 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51726;product=putative tail tube protein;protein_id=CAL10977.1;transl_table=11
AM286415.1	EMBL	gene	1000369	1000689	.	+	.	ID=gene872;Name=YE0875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0875
AM286415.1	EMBL	CDS	1000369	1000689	.	+	0	ID=cds833;Parent=gene872;Dbxref=EnsemblGenomes-Gn:YE0875,EnsemblGenomes-Tr:CAL10978,InterPro:IPR007633,UniProtKB/TrEMBL:A1JK67,NCBI_GP:CAL10978.1;Name=CAL10978.1;Note=Similar to Bacteriophage P2 holin SWALL:HOLI_BPP2 (SWALL:P51773) (93 aa) fasta scores: E(): 3.3e-09%2C 46.06 id in 89 aa%2C and to Bacteriophage 186 Orf24 SWALL:O80308 (EMBL:U32222) (98 aa) fasta scores: E(): 2.1e-08%2C 43.82 id in 89 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51773;product=putative phage holin;protein_id=CAL10978.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1000396	1000449	.	+	.	ID=id1691;Note=3 probable transmembrane helices predicted for YE0875 by TMHMM2.0 at aa 10-27%2C 40-62 and 67-89;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1000486	1000554	.	+	.	ID=id1691;Note=3 probable transmembrane helices predicted for YE0875 by TMHMM2.0 at aa 10-27%2C 40-62 and 67-89;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1000567	1000635	.	+	.	ID=id1691;Note=3 probable transmembrane helices predicted for YE0875 by TMHMM2.0 at aa 10-27%2C 40-62 and 67-89;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	1000686	1001027	.	+	.	ID=gene873;Name=YE0876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0876
AM286415.1	EMBL	CDS	1000686	1001027	.	+	0	ID=cds834;Parent=gene873;Dbxref=EnsemblGenomes-Gn:YE0876,EnsemblGenomes-Tr:CAL10979,InterPro:IPR009045,UniProtKB/TrEMBL:A1JK68,NCBI_GP:CAL10979.1;Name=CAL10979.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL10979.1;transl_table=11
AM286415.1	EMBL	gene	1001027	1001398	.	+	.	ID=gene874;Name=YE0877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0877
AM286415.1	EMBL	CDS	1001027	1001398	.	+	0	ID=cds835;Parent=gene874;Dbxref=EnsemblGenomes-Gn:YE0877,EnsemblGenomes-Tr:CAL10980,UniProtKB/TrEMBL:A1JK69,NCBI_GP:CAL10980.1;Name=CAL10980.1;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL10980.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1001027	1001038	.	+	.	ID=id1692;Note=PS00228 Tubulin-beta mRNA autoregulation signal.;gbkey=misc_feature;inference=protein motif:Prosite:PS00228
AM286415.1	EMBL	gene	1001513	1001788	.	+	.	ID=gene875;Name=YE0878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0878
AM286415.1	EMBL	CDS	1001513	1001788	.	+	0	ID=cds836;Parent=gene875;Dbxref=EnsemblGenomes-Gn:YE0878,EnsemblGenomes-Tr:CAL10981,InterPro:IPR024406,UniProtKB/TrEMBL:A1JK70,NCBI_GP:CAL10981.1;Name=CAL10981.1;Note=Similar to Haemophilus influenzae phage HP2 Orf26 SWALL:AAK37810 (EMBL:AY027935) (102 aa) fasta scores: E(): 1.2e-06%2C 32.22 38d in 90 aa;gbkey=CDS;inference=similar to sequence:INSDC:AY027935;product=hypothetical phage-related protein;protein_id=CAL10981.1;transl_table=11
AM286415.1	EMBL	gene	1001985	1004042	.	+	.	ID=gene876;Name=YE0879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0879
AM286415.1	EMBL	CDS	1001985	1004042	.	+	0	ID=cds837;Parent=gene876;Dbxref=EnsemblGenomes-Gn:YE0879,EnsemblGenomes-Tr:CAL10982,InterPro:IPR010090,UniProtKB/TrEMBL:A1JK71,NCBI_GP:CAL10982.1;Name=CAL10982.1;Note=Similar to Bacteriophage HP1 hypothetical protein SWALL:YO27_BPHP1 (SWALL:P51731) (689 aa) fasta scores: E(): 6.1e-45%2C 30.47 38d in 712 aa and to Haemophilus phage HP2 Orf27 SWALL:Q94MY4 (EMBL:AY027935) (709 aa) fasta scores: E(): 1.2e-40%2C 28.88 38d in 741 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51731;product=hypothetical phage-related protein;protein_id=CAL10982.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1003110	1003178	.	+	.	ID=id1693;Note=6 probable transmembrane helices predicted for YE0879 by TMHMM2.0 at aa 333-355%2C 360-382%2C 387-404%2C417-439%2C 443-465 and 494-516;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1003191	1003259	.	+	.	ID=id1693;Note=6 probable transmembrane helices predicted for YE0879 by TMHMM2.0 at aa 333-355%2C 360-382%2C 387-404%2C417-439%2C 443-465 and 494-516;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1003272	1003325	.	+	.	ID=id1693;Note=6 probable transmembrane helices predicted for YE0879 by TMHMM2.0 at aa 333-355%2C 360-382%2C 387-404%2C417-439%2C 443-465 and 494-516;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1003362	1003430	.	+	.	ID=id1693;Note=6 probable transmembrane helices predicted for YE0879 by TMHMM2.0 at aa 333-355%2C 360-382%2C 387-404%2C417-439%2C 443-465 and 494-516;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1003440	1003508	.	+	.	ID=id1693;Note=6 probable transmembrane helices predicted for YE0879 by TMHMM2.0 at aa 333-355%2C 360-382%2C 387-404%2C417-439%2C 443-465 and 494-516;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1003593	1003661	.	+	.	ID=id1693;Note=6 probable transmembrane helices predicted for YE0879 by TMHMM2.0 at aa 333-355%2C 360-382%2C 387-404%2C417-439%2C 443-465 and 494-516;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	1004039	1004365	.	+	.	ID=gene877;Name=YE0880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0880
AM286415.1	EMBL	CDS	1004039	1004365	.	+	0	ID=cds838;Parent=gene877;Dbxref=EnsemblGenomes-Gn:YE0880,EnsemblGenomes-Tr:CAL10983,InterPro:IPR019697,UniProtKB/TrEMBL:A1JK72,NCBI_GP:CAL10983.1;Name=CAL10983.1;Note=Similar to Bacteriophage HP1 hypothetical protein SWALL:YO28_BPHP1 (SWALL:P51732) (111 aa) fasta scores: E(): 7e-23%2C 63.36 38d in 101 aa and to Haemophilus phage HP2 Orf28 SWALL:Q94MY3 (EMBL:AY027935) (111 aa) fasta scores: E(): 1.9e-22%2C 62.37 38d in 101 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51732;product=hypothetical phage-related protein;protein_id=CAL10983.1;transl_table=11
AM286415.1	EMBL	gene	1004365	1005549	.	+	.	ID=gene878;Name=YE0881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0881
AM286415.1	EMBL	CDS	1004365	1005549	.	+	0	ID=cds839;Parent=gene878;Dbxref=EnsemblGenomes-Gn:YE0881,EnsemblGenomes-Tr:CAL10984,InterPro:IPR006949,UniProtKB/TrEMBL:A1JK73,NCBI_GP:CAL10984.1;Name=CAL10984.1;Note=Similar to Haemophilus phage HP2 Orf29 SWALL:Q94MY2 (EMBL:AY027935) (382 aa) fasta scores: E(): 9.8e-76%2C50.67 38d in 373 aa and to Bacteriophage HP1 hypothetical protein SWALL:YO29_BPHP1 (SWALL:P51733) (393 aa) fasta scores: E(): 1.2e-67%2C 49.7 38d in 340 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51733;product=hypothetical phage-related protein;protein_id=CAL10984.1;transl_table=11
AM286415.1	EMBL	gene	1005542	1006165	.	+	.	ID=gene879;Name=YE0882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0882
AM286415.1	EMBL	CDS	1005542	1006165	.	+	0	ID=cds840;Parent=gene879;Dbxref=EnsemblGenomes-Gn:YE0882,EnsemblGenomes-Tr:CAL10985,UniProtKB/TrEMBL:A1JK74,NCBI_GP:CAL10985.1;Name=CAL10985.1;Note=Similar to Bacteriophage HP1 hypothetical protein SWALL:YO30_BPHP1 (SWALL:P51734) (174 aa) fasta scores: E(): 2e-33%2C 50.86 38d in 173 aa and to Bacteriophage K139 Orf34 SWALL:Q8W734 (EMBL:AF125163) (219 aa) fasta scores: E(): 7.5e-31%2C 41.7 38d in 211 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51734;product=hypothetical phage-related protein;protein_id=CAL10985.1;transl_table=11
AM286415.1	EMBL	gene	1006175	1007719	.	+	.	ID=gene880;Name=YE0883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0883
AM286415.1	EMBL	CDS	1006175	1007719	.	+	0	ID=cds841;Parent=gene880;Dbxref=EnsemblGenomes-Gn:YE0883,EnsemblGenomes-Tr:CAL10986,InterPro:IPR005068,InterPro:IPR011083,InterPro:IPR022225,UniProtKB/TrEMBL:A1JK75,NCBI_GP:CAL10986.1;Name=CAL10986.1;Note=Similar in the conserved N-terminal proteion of the predicted product to Bacteriophage HP1 probable tail fiber protein SWALL:VPH_BPHP1 (SWALL:P51735) (925 aa) fasta scores: E(): 6.3e-39%2C 41.4 38d in 355 aa and to Haemophilus phage HP2 Orf31 SWALL:Q94MY0 (EMBL:AY027935) (910 aa) fasta scores: E(): 3.9e-38%2C 40.17 38d in 351 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51735;product=probable tail fiber protein;protein_id=CAL10986.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1007084	1007215	.	+	.	ID=id1694;Note=Pfam match to entry PF03406 Phage_fiber_2%2C Phage tail fiber repeat%2C score 31.9%2C E-value 9.3e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF03406
AM286415.1	EMBL	gene	1007719	1008357	.	+	.	ID=gene881;Name=YE0884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0884
AM286415.1	EMBL	CDS	1007719	1008357	.	+	0	ID=cds842;Parent=gene881;Dbxref=EnsemblGenomes-Gn:YE0884,EnsemblGenomes-Tr:CAL10987,UniProtKB/TrEMBL:A1JK76,NCBI_GP:CAL10987.1;Name=CAL10987.1;Note=Similar to Escherichia coli tail fiber assembly protein from lambdoid prophage E14 SWALL:TFAE_ECOLI (SWALL:P09153) (200 aa) fasta scores: E(): 3.7e-17%2C 39.58 id in 192 aa and to Bacteriophage HK97 Gp29 SWALL:Q9MCR5 (EMBL:AF069529) (202 aa) fasta scores: E(): 2.6e-18%2C38.07 38d in 197 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P09153;product=putative tail fiber assembly protein;protein_id=CAL10987.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1007884	1008075	.	+	.	ID=id1695;Note=Pfam match to entry PF02413 DUF144%2C Domain of unknown function DUF144%2C score 29.2%2C E-value 9.9e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF02413
AM286415.1	EMBL	gene	1008347	1009054	.	+	.	ID=gene882;Name=YE0885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0885
AM286415.1	EMBL	CDS	1008347	1009054	.	+	0	ID=cds843;Parent=gene882;Dbxref=EnsemblGenomes-Gn:YE0885,EnsemblGenomes-Tr:CAL10988,UniProtKB/TrEMBL:A1JK77,NCBI_GP:CAL10988.1;Name=CAL10988.1;Note=Similar to Haemophilus phage HP2 Orf33 SWALL:Q94MX8 (EMBL:AY027935) (255 aa) fasta scores: E(): 7.3e-13%2C28.46 38d in 260 aa and to Bacteriophage HP1 hypothetical protein SWALL:YO33_BPHP1 (SWALL:P51737) (258 aa) fasta scores: E(): 6.9e-12%2C 27.9 38d in 258 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51737;product=hypothetical phage-related protein;protein_id=CAL10988.1;transl_table=11
AM286415.1	EMBL	gene	1009056	1009601	.	+	.	ID=gene883;Name=YE0886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0886
AM286415.1	EMBL	CDS	1009056	1009601	.	+	0	ID=cds844;Parent=gene883;Dbxref=EnsemblGenomes-Gn:YE0886,EnsemblGenomes-Tr:CAL10989,UniProtKB/TrEMBL:A1JK78,NCBI_GP:CAL10989.1;Name=CAL10989.1;Note=Similar to Haemophilus phage HP2 Orf34 SWALL:Q94MX7 (EMBL:AY027935) (186 aa) fasta scores: E(): 1.5e-20%2C40.78 38d in 179 aa and to Bacteriophage HP1 hypothetical protein SWALL:YO34_BPHP1 (SWALL:P51738) (187 aa) fasta scores: E(): 2.7e-20%2C 39.34 38d in 183 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51738;product=hypothetical phage-related protein;protein_id=CAL10989.1;transl_table=11
AM286415.1	EMBL	gene	1009598	1011295	.	+	.	ID=gene884;Name=YE0887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0887
AM286415.1	EMBL	CDS	1009598	1011295	.	+	0	ID=cds845;Parent=gene884;Dbxref=EnsemblGenomes-Gn:YE0887,EnsemblGenomes-Tr:CAL10990,InterPro:IPR006531,UniProtKB/TrEMBL:A1JK79,NCBI_GP:CAL10990.1;Name=CAL10990.1;Note=Similar to Haemophilus phage HP2 Orf35 SWALL:Q94MX6 (EMBL:AY027935) (533 aa) fasta scores: E(): 7e-71%2C 40.7 id in 565 aa%2C and to Bacteriophage HP1 hypothetical protein SWALL:YO35_BPHP1 (SWALL:P51739) (533 aa) fasta scores: E(): 1.7e-69%2C 39.64 38d in 565 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51739;product=hypothetical phage-related protein;protein_id=CAL10990.1;transl_table=11
AM286415.1	EMBL	gene	1011378	1011797	.	+	.	ID=gene885;Name=YE0888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0888
AM286415.1	EMBL	CDS	1011378	1011797	.	+	0	ID=cds846;Parent=gene885;Dbxref=EnsemblGenomes-Gn:YE0888,EnsemblGenomes-Tr:CAL10991,UniProtKB/TrEMBL:A1JK80,NCBI_GP:CAL10991.1;Name=CAL10991.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related membrane protein;protein_id=CAL10991.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1011717	1011785	.	+	.	ID=id1696;Note=1 probable transmembrane helix predicted for YE0888 by TMHMM2.0 at aa 114-136;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	repeat_region	1012603	1012625	.	-	.	ID=id1697;Note=Direct repeat flanking prophage%2C 23mer;gbkey=repeat_region
AM286415.1	EMBL	gene	1012660	1013022	.	-	.	ID=gene886;Name=yfiA;gbkey=Gene;gene=yfiA;gene_biotype=protein_coding;locus_tag=YE0889
AM286415.1	EMBL	CDS	1012660	1013022	.	-	0	ID=cds847;Parent=gene886;Dbxref=EnsemblGenomes-Gn:YE0889,EnsemblGenomes-Tr:CAL10992,GOA:A1JK81,InterPro:IPR003489,UniProtKB/TrEMBL:A1JK81,NCBI_GP:CAL10992.1;Name=CAL10992.1;gbkey=CDS;gene=yfiA;product=putative sigma 54 modulation protein;protein_id=CAL10992.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1012738	1013019	.	-	.	ID=id1698;Note=Pfam match to entry PF02482 Ribosomal_S30%2C Sigma 54 modulation protein / S30EA ribosomal protein%2C score 155.9%2C E-value 4.6e-44;gbkey=misc_feature;gene=yfiA;inference=protein motif:PFAM:PF02482
AM286415.1	EMBL	gene	1013390	1014121	.	-	.	ID=gene887;Name=yfiO;gbkey=Gene;gene=yfiO;gene_biotype=protein_coding;locus_tag=YE0890
AM286415.1	EMBL	CDS	1013390	1014121	.	-	0	ID=cds848;Parent=gene887;Dbxref=EnsemblGenomes-Gn:YE0890,EnsemblGenomes-Tr:CAL10993,GOA:A1JK82,InterPro:IPR006194,InterPro:IPR011990,InterPro:IPR017689,UniProtKB/TrEMBL:A1JK82,NCBI_GP:CAL10993.1;Name=CAL10993.1;gbkey=CDS;gene=yfiO;product=putative lipoprotein;protein_id=CAL10993.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1013393	1014109	.	-	.	ID=id1699;Note=Pfam match to entry PF03696 UPF0169%2CUncharacterised protein family (UPF0169)%2C score 463.9%2CE-value 8.9e-137;gbkey=misc_feature;gene=yfiO;inference=protein motif:PFAM:PF03696
AM286415.1	EMBL	sequence_feature	1014062	1014094	.	-	.	ID=id1700;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yfiO;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1014257	1015234	.	+	.	ID=gene888;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;gene_synonym=sfhB;locus_tag=YE0891
AM286415.1	EMBL	CDS	1014257	1015234	.	+	0	ID=cds849;Parent=gene888;Dbxref=EnsemblGenomes-Gn:YE0891,EnsemblGenomes-Tr:CAL10994,GOA:A1JK83,InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR006225,InterPro:IPR020103,UniProtKB/TrEMBL:A1JK83,NCBI_GP:CAL10994.1;Name=CAL10994.1;gbkey=CDS;gene=rluD;product=ribosomal large subunit pseudouridine synthase D;protein_id=CAL10994.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1014308	1014451	.	+	.	ID=id1701;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 52.2%2C E-value 7.3e-13;gbkey=misc_feature;gene=rluD;inference=protein motif:PFAM:PF01479
AM286415.1	EMBL	sequence_feature	1014530	1014982	.	+	.	ID=id1702;Note=Pfam match to entry PF00849 PseudoU_synth_2%2C RNA pseudouridylate synthase%2C score 237.7%2C E-value 1.1e-68;gbkey=misc_feature;gene=rluD;inference=protein motif:PFAM:PF00849
AM286415.1	EMBL	sequence_feature	1014659	1014703	.	+	.	ID=id1703;Note=PS01129 Rlu family of pseudouridine synthase signature.;gbkey=misc_feature;gene=rluD;inference=protein motif:Prosite:PS01129
AM286415.1	EMBL	gene	1015234	1015965	.	+	.	ID=gene889;Name=YE0892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0892
AM286415.1	EMBL	CDS	1015234	1015965	.	+	0	ID=cds850;Parent=gene889;Dbxref=EnsemblGenomes-Gn:YE0892,EnsemblGenomes-Tr:CAL10995,InterPro:IPR003730,InterPro:IPR011324,UniProtKB/TrEMBL:A1JK84,NCBI_GP:CAL10995.1;Name=CAL10995.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10995.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1015318	1015962	.	+	.	ID=id1704;Note=Pfam match to entry PF02578 DUF152%2C Uncharacterized ACR%2C YfiH family COG1496%2C score 295.2%2C E-value 5.1e-86;gbkey=misc_feature;inference=protein motif:PFAM:PF02578
AM286415.1	EMBL	gene	1016096	1018669	.	+	.	ID=gene890;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;gene_synonym=htpM;locus_tag=YE0893
AM286415.1	EMBL	CDS	1016096	1018669	.	+	0	ID=cds851;Parent=gene890;Dbxref=EnsemblGenomes-Gn:YE0893,EnsemblGenomes-Tr:CAL10996,GOA:A1JK85,InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004176,InterPro:IPR017730,InterPro:IPR018368,InterPro:IPR019489,InterPro:IPR023150,InterPro:IPR027417,InterPro:IPR028299,UniProtKB/TrEMBL:A1JK85,NCBI_GP:CAL10996.1;Name=CAL10996.1;gbkey=CDS;gene=clpB;product=Clp ATPase;protein_id=CAL10996.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1016144	1016302	.	+	.	ID=id1705;Note=Pfam match to entry PF02861 Clp_N%2C Clp amino terminal domain%2C score 56.2%2C E-value 4.8e-14;gbkey=misc_feature;gene=clpB;inference=protein motif:PFAM:PF02861
AM286415.1	EMBL	sequence_feature	1016375	1016530	.	+	.	ID=id1706;Note=Pfam match to entry PF02861 Clp_N%2C Clp amino terminal domain%2C score 54.7%2C E-value 1.3e-13;gbkey=misc_feature;gene=clpB;inference=protein motif:PFAM:PF02861
AM286415.1	EMBL	sequence_feature	1016696	1017280	.	+	.	ID=id1707;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 54.5%2C E-value 1.5e-13;gbkey=misc_feature;gene=clpB;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	1016711	1016734	.	+	.	ID=id1708;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=clpB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1016975	1017013	.	+	.	ID=id1709;Note=PS00870 Chaperonins clpA/B signature 1.;gbkey=misc_feature;gene=clpB;inference=protein motif:Prosite:PS00870
AM286415.1	EMBL	sequence_feature	1017641	1017664	.	+	.	ID=id1710;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=clpB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1017893	1018447	.	+	.	ID=id1711;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 1.0%2C E-value 7.3e-05;gbkey=misc_feature;gene=clpB;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	1017908	1017931	.	+	.	ID=id1712;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=clpB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1017986	1018042	.	+	.	ID=id1713;Note=PS00871 Chaperonins clpA/B signature 2.;gbkey=misc_feature;gene=clpB;inference=protein motif:Prosite:PS00871
AM286415.1	EMBL	gene	1019206	1020694	.	+	.	ID=gene891;Name=16S rRNA;gbkey=Gene;gene=16S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	1019206	1020694	.	+	.	ID=rna49;Parent=gene891;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	exon	1019206	1020694	.	+	.	ID=id1714;Parent=rna49;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	gene	1020919	1020994	.	+	.	ID=gene892;Name=tRNA-Glu (TTC);gbkey=Gene;gene=tRNA-Glu (TTC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1020919	1020994	.	+	.	ID=rna50;Parent=gene892;gbkey=tRNA;gene=tRNA-Glu (TTC);product=tRNA-Glu
AM286415.1	EMBL	exon	1020919	1020994	.	+	.	ID=id1715;Parent=rna50;gbkey=tRNA;gene=tRNA-Glu (TTC);product=tRNA-Glu
AM286415.1	EMBL	gene	1021373	1024366	.	+	.	ID=gene893;Name=23S rRNA;gbkey=Gene;gene=23S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	1021373	1024366	.	+	.	ID=rna51;Parent=gene893;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Citrobacter freundii 23S EMBL:U77928);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	exon	1021373	1024366	.	+	.	ID=id1716;Parent=rna51;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Citrobacter freundii 23S EMBL:U77928);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	gene	1024366	1024602	.	+	.	ID=gene894;Name=5S rRNA;gbkey=Gene;gene=5S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	1024366	1024602	.	+	.	ID=rna52;Parent=gene894;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	exon	1024366	1024602	.	+	.	ID=id1717;Parent=rna52;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	gene	1024722	1024798	.	+	.	ID=gene895;Name=tRNA-Asp (GTC);gbkey=Gene;gene=tRNA-Asp (GTC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1024722	1024798	.	+	.	ID=rna53;Parent=gene895;gbkey=tRNA;gene=tRNA-Asp (GTC);product=tRNA-Asp
AM286415.1	EMBL	exon	1024722	1024798	.	+	.	ID=id1718;Parent=rna53;gbkey=tRNA;gene=tRNA-Asp (GTC);product=tRNA-Asp
AM286415.1	EMBL	sequence_feature	1024799	1041951	.	+	.	ID=id1719;Note=YGI-2 thought to encode a glyco-lipo-protein. Shows restricted distribution amongst the Enterobacteriaceae.;gbkey=misc_feature
AM286415.1	EMBL	gene	1025066	1026175	.	-	.	ID=gene896;Name=YE0894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0894
AM286415.1	EMBL	CDS	1025066	1026175	.	-	0	ID=cds852;Parent=gene896;Dbxref=EnsemblGenomes-Gn:YE0894,EnsemblGenomes-Tr:CAL10997,GOA:A1JK86,InterPro:IPR001077,InterPro:IPR029063,UniProtKB/TrEMBL:A1JK86,NCBI_GP:CAL10997.1;Name=CAL10997.1;Note=Similar to many proposed O-methylatransferases including: Streptomyces peucetius carminomycin 4-O-methyltransferase DnrK SWALL:CM4T_STRPE (SWALL:Q06528) (355 aa) fasta scores: E(): 6.5e-07%2C 25.29 38d in 340 aa and to Escherichia coli O157:H7 putative O-methyltransferase Z4850 SWALL:Q8X3M8 (EMBL:AE005571) (352 aa) fasta scores: E(): 4.2e-94%2C 63.81 38d in 351 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q06528;product=putative O-methyltransferase;protein_id=CAL10997.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1025921	1025986	.	-	.	ID=id1720;Note=Predicted helix-turn-helix motif with score 1069.000%2C SD 2.83 at aa 64-85%2C sequence ITLDEIEDHCSLSRYAISILLD;gbkey=misc_feature
AM286415.1	EMBL	gene	1026234	1026620	.	-	.	ID=gene897;Name=YE0895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0895
AM286415.1	EMBL	CDS	1026234	1026620	.	-	0	ID=cds853;Parent=gene897;Dbxref=EnsemblGenomes-Gn:YE0895,EnsemblGenomes-Tr:CAL10998,UniProtKB/TrEMBL:A1JK87,NCBI_GP:CAL10998.1;Name=CAL10998.1;Note=Similar to Escherichia coli O157:H7 hypothetical protein Z4849 or Ecs4324 SWALL:Q8X6P0 (EMBL:AE005571) (129 aa) fasta scores: E(): 6.5e-18%2C 45.29 38d in 117 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005571;product=putative lipoprotein;protein_id=CAL10998.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1026561	1026593	.	-	.	ID=id1721;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1027008	1027724	.	+	.	ID=gene898;Name=YE0896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0896
AM286415.1	EMBL	CDS	1027008	1027724	.	+	0	ID=cds854;Parent=gene898;Dbxref=EnsemblGenomes-Gn:YE0896,EnsemblGenomes-Tr:CAL10999,GOA:A1JK88,InterPro:IPR016039,UniProtKB/TrEMBL:A1JK88,NCBI_GP:CAL10999.1;Name=CAL10999.1;Note=Similar to Escherichia coli O157:H7 hypothetical protein z4851 or ecs4326 SWALL:Q8X6N8 (EMBL:AE005571) (240 aa) fasta scores: E(): 1e-39%2C 45.83 38d in 240 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005571;product=conserved hypothetical protein;protein_id=CAL10999.1;transl_table=11
AM286415.1	EMBL	gene	1027712	1028539	.	+	.	ID=gene899;Name=YE0897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0897
AM286415.1	EMBL	CDS	1027712	1028539	.	+	0	ID=cds855;Parent=gene899;Dbxref=EnsemblGenomes-Gn:YE0897,EnsemblGenomes-Tr:CAL11000,GOA:A1JK89,InterPro:IPR002123,UniProtKB/TrEMBL:A1JK89,NCBI_GP:CAL11000.1;Name=CAL11000.1;Note=Similar to Escherichia coli O157:H7 putative phospholipid biosynthesis acyltransferase Z4852 or Ecs4327 SWALL:Q8X6N6 (EMBL:AE005571) (273 aa) fasta scores: E(): 3e-50%2C 47.82 38d in 253 aa and to Neisseria meningitidis acyltransferase Nmb1698 SWALL:Q9JY82 (EMBL:AE002520) (252 aa) fasta scores: E(): 3.8e-24%2C 34.97 38d in 243 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005571;product=putative acyltransferase;protein_id=CAL11000.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1027790	1027858	.	+	.	ID=id1722;Note=1 probable transmembrane helix predicted for YE0897 by TMHMM2.0 at aa 27-49;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1027991	1028491	.	+	.	ID=id1723;Note=Pfam match to entry PF01553 Acyltransferase%2CAcyltransferase%2C score 20.4%2C E-value 2.1e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01553
AM286415.1	EMBL	gene	1028539	1028796	.	+	.	ID=gene900;Name=YE0898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0898
AM286415.1	EMBL	CDS	1028539	1028796	.	+	0	ID=cds856;Parent=gene900;Dbxref=EnsemblGenomes-Gn:YE0898,EnsemblGenomes-Tr:CAL11001,InterPro:IPR009081,UniProtKB/TrEMBL:A1JK90,NCBI_GP:CAL11001.1;Name=CAL11001.1;Note=Similar to Escherichia coli O157:H7 putative acyl carrier protein Z4853 or Ecs4328 SWALL:Q8X6N5 (EMBL:AE005571) (85 aa) fasta scores: E(): 5.8e-19%2C 70.23 id in 84 aa%2C and to Neisseria meningitidis acyl carrier protein%2C putative Nmb1697 SWALL:Q9JY83 (EMBL:AE002520) (86 aa) fasta scores: E(): 2.5e-12%2C 51.76 38d in 85 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005571;product=putative acyl carrier protein;protein_id=CAL11001.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1028644	1028691	.	+	.	ID=id1724;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00012
AM286415.1	EMBL	gene	1028812	1029063	.	+	.	ID=gene901;Name=YE0899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0899
AM286415.1	EMBL	CDS	1028812	1029063	.	+	0	ID=cds857;Parent=gene901;Dbxref=EnsemblGenomes-Gn:YE0899,EnsemblGenomes-Tr:CAL11002,GOA:A1JK91,InterPro:IPR003231,InterPro:IPR009081,UniProtKB/TrEMBL:A1JK91,NCBI_GP:CAL11002.1;Name=CAL11002.1;Note=Similar to Escherichia coli O157:H7 putative acyl carrier protein Z4854 or Ecs4329 SWALL:Q8X6N3 (EMBL:AE005571) (83 aa) fasta scores: E(): 6.3e-17%2C 69.23 id in 78 aa%2C and to Neisseria meningitidis acyl carrier protein nmb1696 SWALL:Q9JY84 (EMBL:AE002520) (81 aa) fasta scores: E(): 6.2e-09%2C 46.66 38d in 75 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005571;product=putative acyl carrier protein;protein_id=CAL11002.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1028833	1029036	.	+	.	ID=id1725;Note=Pfam match to entry PF00550 pp-binding%2CPhosphopantetheine attachment site%2C score 32.8%2C E-value 5.2e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00550
AM286415.1	EMBL	gene	1029077	1029667	.	+	.	ID=gene902;Name=YE0900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0900
AM286415.1	EMBL	CDS	1029077	1029667	.	+	0	ID=cds858;Parent=gene902;Dbxref=EnsemblGenomes-Gn:YE0900,EnsemblGenomes-Tr:CAL11003,UniProtKB/TrEMBL:A1JK92,NCBI_GP:CAL11003.1;Name=CAL11003.1;Note=Similar to Escherichia coli O157:H7 hypothetical protein Z4855 or Ecs4330 SWALL:Q8X6M5 (EMBL:AE005571) (193 aa) fasta scores: E(): 1.7e-30%2C 46.96 38d in 181 aa and to Neisseria meningitidis putative integral membrane protein Nma1954 SWALL:Q9JT66 (EMBL:AL162757) (144 aa) fasta scores: E(): 8.1e-15%2C 38.88 38d in 144 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL162757;product=putative inner membrane protein;protein_id=CAL11003.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1029113	1029181	.	+	.	ID=id1726;Note=6 probable transmembrane helices predicted for YE0900 by TMHMM2.0 at aa 13-35%2C 40-59%2C 66-88%2C 92-114%2C144-163 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1029194	1029253	.	+	.	ID=id1726;Note=6 probable transmembrane helices predicted for YE0900 by TMHMM2.0 at aa 13-35%2C 40-59%2C 66-88%2C 92-114%2C144-163 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1029272	1029340	.	+	.	ID=id1726;Note=6 probable transmembrane helices predicted for YE0900 by TMHMM2.0 at aa 13-35%2C 40-59%2C 66-88%2C 92-114%2C144-163 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1029350	1029418	.	+	.	ID=id1726;Note=6 probable transmembrane helices predicted for YE0900 by TMHMM2.0 at aa 13-35%2C 40-59%2C 66-88%2C 92-114%2C144-163 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1029506	1029565	.	+	.	ID=id1726;Note=6 probable transmembrane helices predicted for YE0900 by TMHMM2.0 at aa 13-35%2C 40-59%2C 66-88%2C 92-114%2C144-163 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1029578	1029646	.	+	.	ID=id1726;Note=6 probable transmembrane helices predicted for YE0900 by TMHMM2.0 at aa 13-35%2C 40-59%2C 66-88%2C 92-114%2C144-163 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	1029667	1031028	.	+	.	ID=gene903;Name=YE0901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0901
AM286415.1	EMBL	CDS	1029667	1031028	.	+	0	ID=cds859;Parent=gene903;Dbxref=EnsemblGenomes-Gn:YE0901,EnsemblGenomes-Tr:CAL11004,GOA:A1JK93,InterPro:IPR000873,InterPro:IPR020845,InterPro:IPR025110,UniProtKB/TrEMBL:A1JK93,NCBI_GP:CAL11004.1;Name=CAL11004.1;Note=Similar to many including: Escherichia coli O157:H7 putative putative surfactin synthetase Z4856 or Ecs4331 SWALL:Q8X6M3 (EMBL:AE005571) (453 aa) fasta scores: E(): 2.6e-64%2C 44.91 38d in 452 aa%2C Ralstonia solanacearum hypothetical protein Rs00787 SWALL:Q8XSV0 (EMBL:AL646078) (563 aa) fasta scores: E(): 3.1e-33%2C 32.86 38d in 432 aa and mycobacterium leprae O-succinylbenzoic acid-coa ligase mene or ml2257 SWALL:Q9CBB8 (EMBL:AL583924) (368 aa) fasta scores: E(): 0.00066%2C 21.63 38d in 379 aa.;gbkey=CDS;inference=similar to sequence:INSDC:AL646078;product=putative AMP-binding protein;protein_id=CAL11004.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1030048	1030515	.	+	.	ID=id1727;Note=Pfam match to entry PF00501 AMP-binding%2CAMP-binding enzyme%2C score 19.9%2C E-value 1.1e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00501
AM286415.1	EMBL	sequence_feature	1030066	1030101	.	+	.	ID=id1728;Note=PS00455 Putative AMP-binding domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00455
AM286415.1	EMBL	sequence_feature	1030678	1030791	.	+	.	ID=id1729;Note=Pfam match to entry PF00501 AMP-binding%2CAMP-binding enzyme%2C score 27.4%2C E-value 9.5e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00501
AM286415.1	EMBL	gene	1031025	1031372	.	+	.	ID=gene904;Name=YE0902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0902
AM286415.1	EMBL	CDS	1031025	1031372	.	+	0	ID=cds860;Parent=gene904;Dbxref=EnsemblGenomes-Gn:YE0902,EnsemblGenomes-Tr:CAL11005,InterPro:IPR013114,InterPro:IPR016962,InterPro:IPR029069,UniProtKB/TrEMBL:A1JK94,NCBI_GP:CAL11005.1;Name=CAL11005.1;Note=Similar to many thioester dehydratase family proteins involved in fatty acid biosynthesis including: Escherichia coli O157:H7 Z4857 protein or ecs4332 SWALL:Q8X6M1 (EMBL:AE005571) (117 aa) fasta scores: E(): 5.8e-14%2C 51.42 38d in 105 aa%2C Escherichia coli%2CEscherichia coli O157:H7 FabZ or SefA SWALL:FABZ_ECOLI (SWALL:P21774) (151 aa) fasta scores: E(): 0.12%2C 34.34 38d in 99 aa%2C and to Yersinia enterocolitica FabZ SWALL:FABZ_YEREN (SWALL:P32205) (178 aa) fasta scores: E(): 0.47%2C 29.8 38d in 104 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P32205;product=putative dehydratase;protein_id=CAL11005.1;transl_table=11
AM286415.1	EMBL	gene	1031363	1033129	.	+	.	ID=gene905;Name=YE0903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0903
AM286415.1	EMBL	CDS	1031363	1033129	.	+	0	ID=cds861;Parent=gene905;Dbxref=EnsemblGenomes-Gn:YE0903,EnsemblGenomes-Tr:CAL11006,GOA:A1JK95,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:A1JK95,NCBI_GP:CAL11006.1;Name=CAL11006.1;Note=Similar to many including: Escherichia coli O157:H7 putative enzyme Z4858 or Ecs4333 SWALL:Q8X6L8 (EMBL:AE005571) (558 aa) fasta scores: E(): 7.3e-112%2C58.13 38d in 578 aa and to Methanosarcina acetivorans dolichyl-phosphate beta-D-mannosyltransferase Ma2169 SWALL:AAM05566 (EMBL:AE010903) (322 aa) fasta scores: E(): 3.1e-06%2C 24.16 38d in 298 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE010903;product=putative bifunctional glycosyl transferase/acyl transferase;protein_id=CAL11006.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1031387	1031860	.	+	.	ID=id1730;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 55.1%2C E-value 1e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	1033098	1033559	.	+	.	ID=gene906;Name=YE0904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0904
AM286415.1	EMBL	CDS	1033098	1033559	.	+	0	ID=cds862;Parent=gene906;Dbxref=EnsemblGenomes-Gn:YE0904,EnsemblGenomes-Tr:CAL11007,InterPro:IPR029069,UniProtKB/TrEMBL:A1JK96,NCBI_GP:CAL11007.1;Name=CAL11007.1;Note=Similar to Escherichia coli O157:H7 hypothetical protein Z4859 or Ecs4334 SWALL:Q8X6L6 (EMBL:AE005571) (140 aa) fasta scores: E(): 1.2e-38%2C 66.91 38d in 136 aa and to Clostridium acetobutylicum predicted esterase Cac0271 SWALL:Q97MC7 (EMBL:AE007540) (138 aa) fasta scores: E(): 3e-07%2C 32.14 38d in 112 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE007540;product=putative thioesterase;protein_id=CAL11007.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1033203	1033550	.	+	.	ID=id1731;Note=Pfam match to entry PF03061 4HBT%2C4-hydroxybenzoyl-CoA thioesterase%2C score 44.4%2C E-value 1.7e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF03061
AM286415.1	EMBL	gene	1033556	1034161	.	+	.	ID=gene907;Name=YE0905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0905
AM286415.1	EMBL	CDS	1033556	1034161	.	+	0	ID=cds863;Parent=gene907;Dbxref=EnsemblGenomes-Gn:YE0905,EnsemblGenomes-Tr:CAL11008,GOA:A1JK97,InterPro:IPR004564,InterPro:IPR029046,UniProtKB/TrEMBL:A1JK97,NCBI_GP:CAL11008.1;Name=CAL11008.1;Note=Similar to several including: Escherichia coli O157:H7 hypothetical protein Z4860 or Ecs4335 SWALL:Q8X6L5 (EMBL:AE005571) (201 aa) fasta scores: E(): 1.1e-40%2C 55 id in 200 aa and to Pseudomonas syringae outer-membrane lipoproteins carrier protein LolA SWALL:LOLA_PSESY (SWALL:Q9Z3U0) (207 aa) fasta scores: E(): 0.069%2C 25 38d in 184 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9Z3U0;product=putative outer-membrane lipoprotein carrier protein;protein_id=CAL11008.1;transl_table=11
AM286415.1	EMBL	gene	1034151	1036466	.	+	.	ID=gene908;Name=YE0906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0906
AM286415.1	EMBL	CDS	1034151	1036466	.	+	0	ID=cds864;Parent=gene908;Dbxref=EnsemblGenomes-Gn:YE0906,EnsemblGenomes-Tr:CAL11009,GOA:A1JK98,InterPro:IPR004869,UniProtKB/TrEMBL:A1JK98,NCBI_GP:CAL11009.1;Name=CAL11009.1;Note=Similar to many including: Escherichia coli O157:H7 protein Z4861 or Ecs4336 SWALL:Q8X6L3 (EMBL:AE005571) (772 aa) fasta scores: E(): 1.9e-163%2C 56.15 38d in 764 aa and to Ralstonia solanacearum probable lipoprotein transmembrane Rsp00775 SWALL:Q8XSV5 (EMBL:AL646078) (805 aa) fasta scores: E(): 1.3e-33%2C 29.31 38d in 788 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646078;product=putative inner membrane protein;protein_id=CAL11009.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1034175	1034234	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1034907	1034966	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1034985	1035053	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1035063	1035131	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1035192	1035260	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1035270	1035338	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1035417	1035485	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1036035	1036103	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1036122	1036190	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1036203	1036271	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1036290	1036358	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1036371	1036439	.	+	.	ID=id1732;Note=12 probable transmembrane helices predicted for YE0906 by TMHMM2.0 at aa 9-28%2C 253-272%2C 279-301%2C 305-327%2C348-370%2C 374-396%2C 423-445%2C 629-651%2C 658-680%2C 685-707%2C714-736 and 741-763;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	1034670	1035146	.	+	.	ID=id1733;Note=Pfam match to entry PF01569 PAP2%2C PAP2 superfamily%2C score -13.9%2C E-value 0.024;gbkey=misc_feature;inference=protein motif:PFAM:PF01569
AM286415.1	EMBL	sequence_feature	1035276	1035308	.	+	.	ID=id1734;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1036463	1037035	.	+	.	ID=gene909;Name=YE0907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0907
AM286415.1	EMBL	CDS	1036463	1037035	.	+	0	ID=cds865;Parent=gene909;Dbxref=EnsemblGenomes-Gn:YE0907,EnsemblGenomes-Tr:CAL11010,InterPro:IPR021675,UniProtKB/TrEMBL:A1JK99,NCBI_GP:CAL11010.1;Name=CAL11010.1;Note=Similar to Escherichia coli O157:H7 protein Z4862 or Ecs4337 SWALL:Q8X6L1 (EMBL:AE005571) (194 aa) fasta scores: E(): 7.3e-35%2C 55.42 38d in 175 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005571;product=putative lipoprotein;protein_id=CAL11010.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1036487	1036519	.	+	.	ID=id1735;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1037041	1038216	.	+	.	ID=gene910;Name=YE0908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0908
AM286415.1	EMBL	CDS	1037041	1038216	.	+	0	ID=cds866;Parent=gene910;Dbxref=EnsemblGenomes-Gn:YE0908,EnsemblGenomes-Tr:CAL11011,GOA:A1JKA0,InterPro:IPR014030,InterPro:IPR014031,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR018201,UniProtKB/TrEMBL:A1JKA0,NCBI_GP:CAL11011.1;Name=CAL11011.1;Note=Similar to several thought to be involved in fatty acid biosynthesis: Escherichia coli O157:H7 putative 3-oxoacyl-[acp] synthase Z4863 or ecs4338 SWALL:Q8X6K9 (EMBL:AE005571) (389 aa) fasta scores: E(): 4.1e-92%2C62.62 38d in 388 aa%2C and to Xylella fastidiosa beta-ketoacyl-[ACP] synthase II Xf1639 SWALL:Q9PCW5 (EMBL:AE003990) (399 aa) fasta scores: E(): 2.4e-35%2C41.55 38d in 361 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005571;product=putative beta-ketoacyl-[ACP] synthase;protein_id=CAL11011.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1037041	1037739	.	+	.	ID=id1736;Note=Pfam match to entry PF00109 ketoacyl-synt%2CBeta-ketoacyl synthase%2C N-terminal domain%2C score 5.1%2CE-value 7e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00109
AM286415.1	EMBL	sequence_feature	1037482	1037514	.	+	.	ID=id1737;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1037485	1037535	.	+	.	ID=id1738;Note=PS00606 Beta-ketoacyl synthases active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00606
AM286415.1	EMBL	sequence_feature	1037500	1037556	.	+	.	ID=id1739;Note=PS00098 Thiolases acyl-enzyme intermediate signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00098
AM286415.1	EMBL	sequence_feature	1037749	1038213	.	+	.	ID=id1740;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2CBeta-ketoacyl synthase%2C C-terminal domain%2C score 116.4%2CE-value 3.4e-32;gbkey=misc_feature;inference=protein motif:PFAM:PF02801
AM286415.1	EMBL	gene	1038213	1038677	.	+	.	ID=gene911;Name=YE0909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0909
AM286415.1	EMBL	CDS	1038213	1038677	.	+	0	ID=cds867;Parent=gene911;Dbxref=EnsemblGenomes-Gn:YE0909,EnsemblGenomes-Tr:CAL11012,GOA:A1JKA1,InterPro:IPR013114,InterPro:IPR016776,InterPro:IPR029069,UniProtKB/TrEMBL:A1JKA1,NCBI_GP:CAL11012.1;Name=CAL11012.1;Note=Similar to Pseudomonas aeruginosa (3r)-hydroxymyristoyl-[acyl carrier protein] dehydratase FabZ or Pa3645 SWALL:FABZ_PSEAE (SWALL:Q9HXY7) (146 aa) fasta scores: E(): 0.00031%2C 30.07 38d in 133 aa%2C and to Escherichia coli O157:H7 z4864 protein z4864 or ecs4339 SWALL:Q8X6K7 (EMBL:AE005571) (154 aa) fasta scores: E(): 1.1e-28%2C 52.81 38d in 142 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9HXY7;product=putative dehydratase;protein_id=CAL11012.1;transl_table=11
AM286415.1	EMBL	gene	1038674	1039405	.	+	.	ID=gene912;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=YE0910
AM286415.1	EMBL	CDS	1038674	1039405	.	+	0	ID=cds868;Parent=gene912;Dbxref=EnsemblGenomes-Gn:YE0910,EnsemblGenomes-Tr:CAL11013,GOA:A1JKA2,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR011285,InterPro:IPR016040,UniProtKB/TrEMBL:A1JKA2,NCBI_GP:CAL11013.1;Name=CAL11013.1;Note=Similar to Actinobacillus actinomycetemcomitans 3-oxoacyl-[acyl-carrier protein] reductase FabG SWALL:FABG_ACTAC (SWALL:P70720) (242 aa) fasta scores: E(): 3e-53%2C 58.67 38d in 242 aa and Escherichia coli O157:H7 putative beta-ketoacyl-ACP reductase Z4865 or ecs4340 SWALL:Q8X5U6 (EMBL:AE005571) (243 aa) fasta scores: E(): 2.9e-72%2C 77.36 38d in 243 aa;gbkey=CDS;gene=fabG;inference=similar to sequence:UniProtKB:P70720;product=3-oxoacyl-[acyl-carrier protein] reductase;protein_id=CAL11013.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1038674	1039399	.	+	.	ID=id1741;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 248.5%2C E-value 5.9e-72;gbkey=misc_feature;gene=fabG;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	gene	1039402	1040649	.	+	.	ID=gene913;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=YE0911
AM286415.1	EMBL	CDS	1039402	1040649	.	+	0	ID=cds869;Parent=gene913;Dbxref=EnsemblGenomes-Gn:YE0911,EnsemblGenomes-Tr:CAL11014,GOA:A1JKA3,InterPro:IPR014030,InterPro:IPR014031,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR018201,UniProtKB/TrEMBL:A1JKA3,NCBI_GP:CAL11014.1;Name=CAL11014.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 3-oxoacyl-[acyl-carrier-protein] synthase II FabF or FabJ or b1095 or z1734 or ecs1473 SWALL:FABF_ECOLI (SWALL:P39435) (412 aa) fasta scores: E(): 2.1e-45%2C 37.13 id in 412 aa and to Actinobacillus actinomycetemcomitans beta-ketoacyl-ACP synthase IV FabF SWALL:P70719 (EMBL:D88189) (414 aa) fasta scores: E(): 6.7e-91%2C 55.96 id in 411 aa;gbkey=CDS;gene=fabF;inference=similar to sequence:UniProtKB:P39435;product=3-oxoacyl-[acyl-carrier-protein] synthase II;protein_id=CAL11014.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1039423	1040160	.	+	.	ID=id1742;Note=Pfam match to entry PF00109 ketoacyl-synt%2CBeta-ketoacyl synthase%2C N-terminal domain%2C score 156.0%2CE-value 4.2e-44;gbkey=misc_feature;gene=fabF;inference=protein motif:PFAM:PF00109
AM286415.1	EMBL	sequence_feature	1040182	1040646	.	+	.	ID=id1743;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2CBeta-ketoacyl synthase%2C C-terminal domain%2C score 157.1%2CE-value 1.9e-44;gbkey=misc_feature;gene=fabF;inference=protein motif:PFAM:PF02801
AM286415.1	EMBL	gene	1040870	1041673	.	+	.	ID=gene914;Name=YE0912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0912
AM286415.1	EMBL	CDS	1040870	1041673	.	+	0	ID=cds870;Parent=gene914;Dbxref=EnsemblGenomes-Gn:YE0912,EnsemblGenomes-Tr:CAL11015,GOA:A1JKA4,InterPro:IPR001395,InterPro:IPR018170,InterPro:IPR020471,InterPro:IPR023210,UniProtKB/TrEMBL:A1JKA4,NCBI_GP:CAL11015.1;Name=CAL11015.1;gbkey=CDS;product=putative aldo/keto reductase;protein_id=CAL11015.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1040870	1041631	.	+	.	ID=id1744;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 303.3%2C E-value 1.9e-88;gbkey=misc_feature;inference=protein motif:PFAM:PF00248
AM286415.1	EMBL	sequence_feature	1040954	1041007	.	+	.	ID=id1745;Note=PS00798 Aldo/keto reductase family signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00798
AM286415.1	EMBL	sequence_feature	1041209	1041262	.	+	.	ID=id1746;Note=PS00062 Aldo/keto reductase family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00062
AM286415.1	EMBL	gene	1041897	1042799	.	-	.	ID=gene915;Name=YE0914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0914
AM286415.1	EMBL	CDS	1041897	1042799	.	-	0	ID=cds871;Parent=gene915;Dbxref=EnsemblGenomes-Gn:YE0914,EnsemblGenomes-Tr:CAL11016,GOA:A1JKA5,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JKA5,NCBI_GP:CAL11016.1;Name=CAL11016.1;Note=Similar to many LysR-family regulatory proteins including: Escherichia coli hypothetical transcriptional regulator YafC or b0208 SWALL:YAFC_ECOLI (SWALL:P30864) (304 aa) fasta scores: E(): 1.1e-75%2C 65.43 38d in 298 aa and Salmonella typhimurium putative transcriptional regulator YafC or stm0256 SWALL:Q8ZRM6 (EMBL:AE008706) (304 aa) fasta scores: E(): 1.7e-75%2C 65.77 38d in 298 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P30864;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL11016.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1041918	1042538	.	-	.	ID=id1747;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 154.5%2C E-value 1.2e-43;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	1042608	1042787	.	-	.	ID=id1748;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 87.1%2C E-value 2.3e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	1042653	1042745	.	-	.	ID=id1749;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	pseudogene	1042918	1044101	.	+	.	ID=gene916;Name=YE0915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0915;pseudo=true
AM286415.1	EMBL	CDS	1042918	1043724	.	+	0	ID=cds872;Parent=gene916;Dbxref=PSEUDO:CAL11017.1;Note=Similar to Salmonella typhimurium putative drug efflux protein Stm0257 SWALL:Q8ZRM5 (EMBL:AE008706) (391 aa) fasta scores: E(): 3.7e-105%2C 78.96 38d in 385 aa%2CAgrobacterium tumefaciens chloramphenicol resistance protein atu4292 or agr_l_1145 SWALL:Q8U807 (EMBL:AE009357) (431 aa) fasta scores: E(): 1.9e-75%2C 58.39 38d in 387 aa and Xanthomonas campestris MFS transporter AraJ or xcc2672 SWALL:AAM41944 (EMBL:AE012379) (402 aa) fasta scores: E(): 1.4e-54%2C 45.38 38d in 390 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE012379;product=MFS-family transporter (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1043724	1044101	.	+	0	ID=cds872;Parent=gene916;Dbxref=PSEUDO:CAL11017.1;Note=Similar to Salmonella typhimurium putative drug efflux protein Stm0257 SWALL:Q8ZRM5 (EMBL:AE008706) (391 aa) fasta scores: E(): 3.7e-105%2C 78.96 38d in 385 aa%2CAgrobacterium tumefaciens chloramphenicol resistance protein atu4292 or agr_l_1145 SWALL:Q8U807 (EMBL:AE009357) (431 aa) fasta scores: E(): 1.9e-75%2C 58.39 38d in 387 aa and Xanthomonas campestris MFS transporter AraJ or xcc2672 SWALL:AAM41944 (EMBL:AE012379) (402 aa) fasta scores: E(): 1.4e-54%2C 45.38 38d in 390 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE012379;product=MFS-family transporter (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1042924	1042992	.	+	.	ID=id1750;Note=8 probable transmembrane helices predicted for YE0915 by TMHMM2.0 at aa 3-25%2C 40-62%2C 69-86%2C 99-121%2C128-150%2C 160-182%2C 202-224 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	1043035	1043103	.	+	.	ID=id1750;Note=8 probable transmembrane helices predicted for YE0915 by TMHMM2.0 at aa 3-25%2C 40-62%2C 69-86%2C 99-121%2C128-150%2C 160-182%2C 202-224 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	1043122	1043175	.	+	.	ID=id1750;Note=8 probable transmembrane helices predicted for YE0915 by TMHMM2.0 at aa 3-25%2C 40-62%2C 69-86%2C 99-121%2C128-150%2C 160-182%2C 202-224 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	1043212	1043280	.	+	.	ID=id1750;Note=8 probable transmembrane helices predicted for YE0915 by TMHMM2.0 at aa 3-25%2C 40-62%2C 69-86%2C 99-121%2C128-150%2C 160-182%2C 202-224 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	1043299	1043367	.	+	.	ID=id1750;Note=8 probable transmembrane helices predicted for YE0915 by TMHMM2.0 at aa 3-25%2C 40-62%2C 69-86%2C 99-121%2C128-150%2C 160-182%2C 202-224 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	1043395	1043463	.	+	.	ID=id1750;Note=8 probable transmembrane helices predicted for YE0915 by TMHMM2.0 at aa 3-25%2C 40-62%2C 69-86%2C 99-121%2C128-150%2C 160-182%2C 202-224 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	1043521	1043589	.	+	.	ID=id1750;Note=8 probable transmembrane helices predicted for YE0915 by TMHMM2.0 at aa 3-25%2C 40-62%2C 69-86%2C 99-121%2C128-150%2C 160-182%2C 202-224 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	1043617	1043685	.	+	.	ID=id1750;Note=8 probable transmembrane helices predicted for YE0915 by TMHMM2.0 at aa 3-25%2C 40-62%2C 69-86%2C 99-121%2C128-150%2C 160-182%2C 202-224 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	1043727	1043780	.	+	.	ID=id1751;Note=4 probable transmembrane helices predicted for YE0916 by TMHMM2.0 at aa 2-19%2C 23-45%2C 58-80 and 90-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1043790	1043858	.	+	.	ID=id1751;Note=4 probable transmembrane helices predicted for YE0916 by TMHMM2.0 at aa 2-19%2C 23-45%2C 58-80 and 90-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1043895	1043963	.	+	.	ID=id1751;Note=4 probable transmembrane helices predicted for YE0916 by TMHMM2.0 at aa 2-19%2C 23-45%2C 58-80 and 90-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1043991	1044059	.	+	.	ID=id1751;Note=4 probable transmembrane helices predicted for YE0916 by TMHMM2.0 at aa 2-19%2C 23-45%2C 58-80 and 90-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	signal_peptide	1042918	1042959	.	+	.	ID=id1752;Note=Signal peptide predicted for YE0915 by SignalP 2.0 HMM (Signal peptide probabilty 0.840) with cleavage site probability 0.596 between residues 14 and 15;gbkey=sig_peptide;pseudo=true
AM286415.1	EMBL	signal_peptide	1043724	1043795	.	+	.	ID=id1753;Note=Signal peptide predicted for YE0916 by SignalP 2.0 HMM (Signal peptide probabilty 0.997) with cleavage site probability 0.751 between residues 24 and 25;gbkey=sig_peptide;pseudo=true
AM286415.1	EMBL	pseudogene	1043724	1043795	.	+	.	ID=gene917;Name=YE0916;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0916;pseudo=true
AM286415.1	EMBL	gene	1044344	1045126	.	+	.	ID=gene918;Name=YE0917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0917
AM286415.1	EMBL	CDS	1044344	1045126	.	+	0	ID=cds873;Parent=gene918;Dbxref=EnsemblGenomes-Gn:YE0917,EnsemblGenomes-Tr:CAL11018,GOA:A1JKA7,InterPro:IPR005135,InterPro:IPR022958,NCBI_GP:CAL11018.1;Name=CAL11018.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11018.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1044470	1045117	.	+	.	ID=id1754;Note=Pfam match to entry PF03372 Exo_endo_phos%2CEndonuclease/Exonuclease/phosphatase family%2C score 68.7%2CE-value 7.9e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF03372
AM286415.1	EMBL	gene	1045178	1046608	.	-	.	ID=gene919;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;gene_synonym=dniR;locus_tag=YE0918
AM286415.1	EMBL	CDS	1045178	1046608	.	-	0	ID=cds874;Parent=gene919;Dbxref=EnsemblGenomes-Gn:YE0918,EnsemblGenomes-Tr:CAL11019,GOA:A1JKA8,InterPro:IPR000189,InterPro:IPR008258,InterPro:IPR018392,InterPro:IPR023346,UniProtKB/TrEMBL:A1JKA8,NCBI_GP:CAL11019.1;Name=CAL11019.1;gbkey=CDS;gene=mltD;product=membrane-bound lytic murein transglycosylase D precursor;protein_id=CAL11019.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1045208	1045342	.	-	.	ID=id1755;Note=Pfam match to entry PF01476 LysM%2C LysM domain %2Cscore 42.4%2C E-value 6.8e-10;gbkey=misc_feature;gene=mltD;inference=protein motif:PFAM:PF01476
AM286415.1	EMBL	sequence_feature	1045373	1045504	.	-	.	ID=id1756;Note=Pfam match to entry PF01476 LysM%2C LysM domain %2Cscore 60.3%2C E-value 2.7e-15;gbkey=misc_feature;gene=mltD;inference=protein motif:PFAM:PF01476
AM286415.1	EMBL	sequence_feature	1045421	1045486	.	-	.	ID=id1757;Note=Predicted helix-turn-helix motif with score 1032.000%2C SD 2.70 at aa 375-396%2C sequence DTLSTIAKRLNIKTSDLQSWNN;gbkey=misc_feature;gene=mltD
AM286415.1	EMBL	sequence_feature	1045748	1045786	.	-	.	ID=id1758;Note=PS00018 EF-hand calcium-binding domain.;gbkey=misc_feature;gene=mltD;inference=protein motif:Prosite:PS00018
AM286415.1	EMBL	sequence_feature	1045889	1046239	.	-	.	ID=id1759;Note=Pfam match to entry PF01464 SLT%2C Transglycosylase SLT domain%2C score 124.4%2C E-value 1.4e-34;gbkey=misc_feature;gene=mltD;inference=protein motif:PFAM:PF01464
AM286415.1	EMBL	sequence_feature	1046096	1046182	.	-	.	ID=id1760;Note=PS00922 Prokaryotic transglycosylases signature.;gbkey=misc_feature;gene=mltD;inference=protein motif:Prosite:PS00922
AM286415.1	EMBL	sequence_feature	1046522	1046554	.	-	.	ID=id1761;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=mltD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1046641	1047396	.	-	.	ID=gene920;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=YE0919
AM286415.1	EMBL	CDS	1046641	1047396	.	-	0	ID=cds875;Parent=gene920;Dbxref=EnsemblGenomes-Gn:YE0919,EnsemblGenomes-Tr:CAL11020,GOA:A1JKA9,InterPro:IPR001279,InterPro:IPR017782,NCBI_GP:CAL11020.1;Name=CAL11020.1;gbkey=CDS;gene=gloB;product=putative hydroxyacylglutathione hydrolase;protein_id=CAL11020.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1046902	1047378	.	-	.	ID=id1762;Note=Pfam match to entry PF00753 lactamase_B%2CMetallo-beta-lactamase superfamily%2C score 166.4%2C E-value 3.1e-47;gbkey=misc_feature;gene=gloB;inference=protein motif:PFAM:PF00753
AM286415.1	EMBL	gene	1047443	1048162	.	+	.	ID=gene921;Name=YE0920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0920
AM286415.1	EMBL	CDS	1047443	1048162	.	+	0	ID=cds876;Parent=gene921;Dbxref=EnsemblGenomes-Gn:YE0920,EnsemblGenomes-Tr:CAL11021,GOA:A1JKB0,InterPro:IPR013216,InterPro:IPR029063,UniProtKB/TrEMBL:A1JKB0,NCBI_GP:CAL11021.1;Name=CAL11021.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11021.1;transl_table=11
AM286415.1	EMBL	gene	1048190	1048654	.	-	.	ID=gene922;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;gene_synonym=dasF,herA,rnh,sdrA;locus_tag=YE0921
AM286415.1	EMBL	CDS	1048190	1048654	.	-	0	ID=cds877;Parent=gene922;Dbxref=EnsemblGenomes-Gn:YE0921,EnsemblGenomes-Tr:CAL11022,GOA:A1JKB1,InterPro:IPR002156,InterPro:IPR012337,InterPro:IPR022892,NCBI_GP:CAL11022.1;Name=CAL11022.1;gbkey=CDS;gene=rnhA;product=ribonuclease HI;protein_id=CAL11022.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1048229	1048651	.	-	.	ID=id1763;Note=Pfam match to entry PF00075 rnaseH%2C RNase H%2C score 229.8%2C E-value 2.5e-66;gbkey=misc_feature;gene=rnhA;inference=protein motif:PFAM:PF00075
AM286415.1	EMBL	gene	1048780	1049496	.	+	.	ID=gene923;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;gene_synonym=mutD;locus_tag=YE0922
AM286415.1	EMBL	CDS	1048780	1049496	.	+	0	ID=cds878;Parent=gene923;Dbxref=EnsemblGenomes-Gn:YE0922,EnsemblGenomes-Tr:CAL11023,GOA:A1JKB2,InterPro:IPR006054,InterPro:IPR006055,InterPro:IPR006309,InterPro:IPR012337,InterPro:IPR013520,UniProtKB/TrEMBL:A1JKB2,NCBI_GP:CAL11023.1;Name=CAL11023.1;gbkey=CDS;gene=dnaQ;product=DNA polymerase III%2C epsilon chain;protein_id=CAL11023.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1048780	1049286	.	+	.	ID=id1764;Note=Pfam match to entry PF00929 Exonuclease%2CExonuclease%2C score 140.8%2C E-value 1.6e-39;gbkey=misc_feature;gene=dnaQ;inference=protein motif:PFAM:PF00929
AM286415.1	EMBL	gene	1049625	1049701	.	+	.	ID=gene924;Name=tRNA-Asp (GTC);gbkey=Gene;gene=tRNA-Asp (GTC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1049625	1049701	.	+	.	ID=rna54;Parent=gene924;gbkey=tRNA;gene=tRNA-Asp (GTC);product=tRNA-Asp
AM286415.1	EMBL	exon	1049625	1049701	.	+	.	ID=id1765;Parent=rna54;gbkey=tRNA;gene=tRNA-Asp (GTC);product=tRNA-Asp
AM286415.1	EMBL	gene	1049954	1050958	.	-	.	ID=gene925;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;gene_synonym=proU;locus_tag=YE0923
AM286415.1	EMBL	CDS	1049954	1050958	.	-	0	ID=cds879;Parent=gene925;Dbxref=EnsemblGenomes-Gn:YE0923,EnsemblGenomes-Tr:CAL11024,GOA:A1JKB3,InterPro:IPR007210,UniProtKB/TrEMBL:A1JKB3,NCBI_GP:CAL11024.1;Name=CAL11024.1;gbkey=CDS;gene=proX;product=glycine betaine-binding periplasmic protein;protein_id=CAL11024.1;transl_table=11
AM286415.1	EMBL	gene	1051114	1052295	.	-	.	ID=gene926;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=YE0924
AM286415.1	EMBL	CDS	1051114	1052295	.	-	0	ID=cds880;Parent=gene926;Dbxref=EnsemblGenomes-Gn:YE0924,EnsemblGenomes-Tr:CAL11025,GOA:A1JKB4,InterPro:IPR000515,UniProtKB/TrEMBL:A1JKB4,NCBI_GP:CAL11025.1;Name=CAL11025.1;gbkey=CDS;gene=proW;product=glycine betaine/L-proline transport system permease;protein_id=CAL11025.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1051831	1051899	.	-	.	ID=id1766;Note=6 probable transmembrane helices predicted for YE0924 by TMHMM2.0 at aa 133-155%2C 160-182%2C 186-208%2C229-260%2C 306-328 and 335-357;gbkey=misc_feature;gene=proW;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1051750	1051818	.	-	.	ID=id1766;Note=6 probable transmembrane helices predicted for YE0924 by TMHMM2.0 at aa 133-155%2C 160-182%2C 186-208%2C229-260%2C 306-328 and 335-357;gbkey=misc_feature;gene=proW;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1051672	1051740	.	-	.	ID=id1766;Note=6 probable transmembrane helices predicted for YE0924 by TMHMM2.0 at aa 133-155%2C 160-182%2C 186-208%2C229-260%2C 306-328 and 335-357;gbkey=misc_feature;gene=proW;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1051516	1051611	.	-	.	ID=id1766;Note=6 probable transmembrane helices predicted for YE0924 by TMHMM2.0 at aa 133-155%2C 160-182%2C 186-208%2C229-260%2C 306-328 and 335-357;gbkey=misc_feature;gene=proW;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1051312	1051380	.	-	.	ID=id1766;Note=6 probable transmembrane helices predicted for YE0924 by TMHMM2.0 at aa 133-155%2C 160-182%2C 186-208%2C229-260%2C 306-328 and 335-357;gbkey=misc_feature;gene=proW;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1051225	1051293	.	-	.	ID=id1766;Note=6 probable transmembrane helices predicted for YE0924 by TMHMM2.0 at aa 133-155%2C 160-182%2C 186-208%2C229-260%2C 306-328 and 335-357;gbkey=misc_feature;gene=proW;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1051288	1051500	.	-	.	ID=id1767;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 64.8%2C E-value 1.2e-16;gbkey=misc_feature;gene=proW;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	1051411	1051497	.	-	.	ID=id1768;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=proW;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	1052288	1053487	.	-	.	ID=gene927;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=YE0925
AM286415.1	EMBL	CDS	1052288	1053487	.	-	0	ID=cds881;Parent=gene927;Dbxref=EnsemblGenomes-Gn:YE0925,EnsemblGenomes-Tr:CAL11026,GOA:A1JKB5,InterPro:IPR000644,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005892,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JKB5,NCBI_GP:CAL11026.1;Name=CAL11026.1;gbkey=CDS;gene=proV;product=glycine betaine/L-proline transport ATP-binding protein;protein_id=CAL11026.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1052309	1052467	.	-	.	ID=id1769;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 27.6%2C E-value 1.9e-05;gbkey=misc_feature;gene=proV;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1052486	1052656	.	-	.	ID=id1770;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 9.6%2C E-value 0.18;gbkey=misc_feature;gene=proV;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1052765	1053328	.	-	.	ID=id1771;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 234.6%2C E-value 9.5e-68;gbkey=misc_feature;gene=proV;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1052951	1052995	.	-	.	ID=id1772;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=proV;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1053284	1053307	.	-	.	ID=id1773;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=proV;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1053982	1054953	.	-	.	ID=gene928;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=YE0926
AM286415.1	EMBL	CDS	1053982	1054953	.	-	0	ID=cds882;Parent=gene928;Dbxref=EnsemblGenomes-Gn:YE0926,EnsemblGenomes-Tr:CAL11027,GOA:A1JKB6,InterPro:IPR000358,InterPro:IPR009078,InterPro:IPR012348,InterPro:IPR026023,InterPro:IPR026494,UniProtKB/TrEMBL:A1JKB6,NCBI_GP:CAL11027.1;Name=CAL11027.1;gbkey=CDS;gene=nrdF;product=ribonucleoside-diphosphate reductase 2 beta chain;protein_id=CAL11027.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1054099	1054944	.	-	.	ID=id1774;Note=Pfam match to entry PF00268 ribonuc_red_sm%2CRibonucleotide reductase%2C small chain%2C score 318.1%2CE-value 6.6e-93;gbkey=misc_feature;gene=nrdF;inference=protein motif:PFAM:PF00268
AM286415.1	EMBL	sequence_feature	1054603	1054653	.	-	.	ID=id1775;Note=PS00368 Ribonucleotide reductase small subunit signature.;gbkey=misc_feature;gene=nrdF;inference=protein motif:Prosite:PS00368
AM286415.1	EMBL	gene	1055214	1057295	.	-	.	ID=gene929;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=YE0927
AM286415.1	EMBL	CDS	1055214	1057295	.	-	0	ID=cds883;Parent=gene929;Dbxref=EnsemblGenomes-Gn:YE0927,EnsemblGenomes-Tr:CAL11028,GOA:A1JKB7,InterPro:IPR000788,InterPro:IPR008926,InterPro:IPR013346,InterPro:IPR013509,InterPro:IPR013554,InterPro:IPR026459,UniProtKB/TrEMBL:A1JKB7,NCBI_GP:CAL11028.1;Name=CAL11028.1;gbkey=CDS;gene=nrdE;product=ribonucleoside-diphosphate reductase 2 alpha chain;protein_id=CAL11028.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1055265	1056836	.	-	.	ID=id1776;Note=Pfam match to entry PF02867 ribonuc_red_lgC%2CRibonucleotide reductase%2C barrel domain%2C score 778.2%2CE-value 2.1e-231;gbkey=misc_feature;gene=nrdE;inference=protein motif:PFAM:PF02867
AM286415.1	EMBL	sequence_feature	1055301	1055366	.	-	.	ID=id1777;Note=Predicted helix-turn-helix motif with score 1032.000%2C SD 2.70 at aa 644-665%2C sequence LFFRDTATTRDINKAQIYAWKK;gbkey=misc_feature;gene=nrdE
AM286415.1	EMBL	sequence_feature	1055595	1055663	.	-	.	ID=id1778;Note=PS00089 Ribonucleotide reductase large subunit signature.;gbkey=misc_feature;gene=nrdE;inference=protein motif:Prosite:PS00089
AM286415.1	EMBL	sequence_feature	1056843	1057067	.	-	.	ID=id1779;Note=Pfam match to entry PF00317 ribonuc_red_lg%2CRibonucleotide reductase%2C all-alpha domain%2C score 102.8%2CE-value 4.2e-28;gbkey=misc_feature;gene=nrdE;inference=protein motif:PFAM:PF00317
AM286415.1	EMBL	gene	1057346	1057750	.	-	.	ID=gene930;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=YE0928
AM286415.1	EMBL	CDS	1057346	1057750	.	-	0	ID=cds884;Parent=gene930;Dbxref=EnsemblGenomes-Gn:YE0928,EnsemblGenomes-Tr:CAL11029,InterPro:IPR004465,InterPro:IPR020852,InterPro:IPR029039,NCBI_GP:CAL11029.1;Name=CAL11029.1;gbkey=CDS;gene=nrdI;product=NrdI protein homologue;protein_id=CAL11029.1;transl_table=11
AM286415.1	EMBL	gene	1057764	1058000	.	-	.	ID=gene931;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=YE0929
AM286415.1	EMBL	CDS	1057764	1058000	.	-	0	ID=cds885;Parent=gene931;Dbxref=EnsemblGenomes-Gn:YE0929,EnsemblGenomes-Tr:CAL11030,GOA:A1JKB9,InterPro:IPR002109,InterPro:IPR011909,InterPro:IPR012336,UniProtKB/TrEMBL:A1JKB9,NCBI_GP:CAL11030.1;Name=CAL11030.1;gbkey=CDS;gene=nrdH;product=putative glutaredoxin;protein_id=CAL11030.1;transl_table=11
AM286415.1	EMBL	gene	1058283	1058714	.	-	.	ID=gene932;Name=YE0930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0930
AM286415.1	EMBL	CDS	1058283	1058714	.	-	0	ID=cds886;Parent=gene932;Dbxref=EnsemblGenomes-Gn:YE0930,EnsemblGenomes-Tr:CAL11031,GOA:A1JKC0,InterPro:IPR003779,InterPro:IPR004675,InterPro:IPR029032,UniProtKB/TrEMBL:A1JKC0,NCBI_GP:CAL11031.1;Name=CAL11031.1;Note=Similar to Salmonella typhimurium putative cytoplasmic protein Stm2804 SWALL:Q8ZML2 (EMBL:AE008828) (143 aa) fasta scores: E(): 3.2e-28%2C 54.22 38d in 142 aa%2Cand to Escherichia coli O157:H7 hypothetical protein Z3974 or ecs3535 SWALL:Q8X921 (EMBL:AE005496) (143 aa) fasta scores: E(): 4.3e-28%2C 54.22 38d in 142 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008828;product=conserved hypothetical protein;protein_id=CAL11031.1;transl_table=11
AM286415.1	EMBL	gene	1058810	1060264	.	+	.	ID=gene933;Name=YE0931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0931
AM286415.1	EMBL	CDS	1058810	1060264	.	+	0	ID=cds887;Parent=gene933;Dbxref=EnsemblGenomes-Gn:YE0931,EnsemblGenomes-Tr:CAL11032,GOA:A1JKC1,InterPro:IPR000524,InterPro:IPR004839,InterPro:IPR011991,InterPro:IPR015421,InterPro:IPR015424,UniProtKB/TrEMBL:A1JKC1,NCBI_GP:CAL11032.1;Name=CAL11032.1;Note=Similar to Salmonella typhimurium putative regulatory protein%2C GntR family Stm2803 SWALL:Q8ZML3 (EMBL:AE008828) (444 aa) fasta scores: E(): 1.7e-64%2C48.35 38d in 455 aa%2C and to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 2.1e-56%2C 37.07 38d in 445 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P49309;product=putative GntR-family transcriptional regulatory protein;protein_id=CAL11032.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1058876	1059055	.	+	.	ID=id1780;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 65.3%2C E-value 8.4e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	gene	1060412	1060720	.	-	.	ID=gene934;Name=YE0932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0932
AM286415.1	EMBL	CDS	1060412	1060720	.	-	0	ID=cds888;Parent=gene934;Dbxref=EnsemblGenomes-Gn:YE0932,EnsemblGenomes-Tr:CAL11033,InterPro:IPR010279,UniProtKB/TrEMBL:A1JKC2,NCBI_GP:CAL11033.1;Name=CAL11033.1;Note=Similar to Yersinia pestis putative membrane protein Ypo0570 SWALL:Q8ZID5 (EMBL:AJ414143) (101 aa) fasta scores: E(): 2.2e-14%2C 53.06 38d in 98 aa and to Escherichia coli%2C and Escherichia coli O157:H7 elab protein ElaB or B2266 or z3526 or ecs3154 SWALL:ELAB_ECOLI (SWALL:P52084) (101 aa) fasta scores: E(): 2.7e-13%2C 51.08 id in 92 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P52084;product=putative inner membrane protein;protein_id=CAL11033.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1060421	1060480	.	-	.	ID=id1781;Note=1 probable transmembrane helix predicted for YE0932 by TMHMM2.0 at aa 81-100;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1061138	1061536	.	+	.	ID=gene935;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=YE0933
AM286415.1	EMBL	CDS	1061138	1061536	.	+	0	ID=cds889;Parent=gene935;Dbxref=EnsemblGenomes-Gn:YE0933,EnsemblGenomes-Tr:CAL11034,GOA:A1JKC3,InterPro:IPR009435,InterPro:IPR023497,NCBI_GP:CAL11034.1;Name=CAL11034.1;gbkey=CDS;gene=asr;product=putative acid shock protein;protein_id=CAL11034.1;transl_table=11
AM286415.1	EMBL	gene	1061732	1062835	.	-	.	ID=gene936;Name=YE0934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0934
AM286415.1	EMBL	CDS	1061732	1062835	.	-	0	ID=cds890;Parent=gene936;Dbxref=EnsemblGenomes-Gn:YE0934,EnsemblGenomes-Tr:CAL11035,GOA:A1JKC4,InterPro:IPR005065,InterPro:IPR029058,InterPro:IPR029059,UniProtKB/TrEMBL:A1JKC4,NCBI_GP:CAL11035.1;Name=CAL11035.1;Note=Similar in parts to several including: Agrobacterium tumefaciens hypothetical protein Atu0247 atu0247 or agr_c_423 SWALL:Q8UIP6 (EMBL:AE008997) (395 aa) fasta scores: E(): 1.7e-27%2C 33.61 38d in 351 aa and to Ralstonia solanacearum probable lipoprotein signal peptide Rsp1248 or rs03192 SWALL:Q8XQH7 (EMBL:AL646083) (372 aa) fasta scores: E(): 3.7e-15%2C 28.3 38d in 325 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646083;product=hypothetical protein;protein_id=CAL11035.1;transl_table=11
AM286415.1	EMBL	gene	1062927	1063934	.	+	.	ID=gene937;Name=YE0935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0935
AM286415.1	EMBL	CDS	1062927	1063934	.	+	0	ID=cds891;Parent=gene937;Dbxref=EnsemblGenomes-Gn:YE0935,EnsemblGenomes-Tr:CAL11036,GOA:A1JKC5,InterPro:IPR009057,InterPro:IPR018060,UniProtKB/TrEMBL:A1JKC5,NCBI_GP:CAL11036.1;Name=CAL11036.1;Note=Similar to several ARAC-family transcriptional regulators including: Agrobacterium tumefaciens Atu0248 or agr_c_425 SWALL:Q8UIP5 (EMBL:AE008997) (365 aa) fasta scores: E(): 5e-32%2C 36.98 38d in 338 aa and to Vibrio cholerae transcriptional regulator%2C arac/xyls family Vca0926 SWALL:Q9KL23 (EMBL:AE004420) (365 aa) fasta scores: E(): 2.1e-14%2C 30.76 38d in 351 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008997;product=AraC-family transcriptional regulator;protein_id=CAL11036.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1062936	1062989	.	+	.	ID=id1782;Note=7 probable transmembrane helices predicted for YE0935 by TMHMM2.0 at aa 4-21%2C 28-50%2C 54-76%2C 88-107%2C111-128%2C 149-168 and 178-200;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1063008	1063076	.	+	.	ID=id1782;Note=7 probable transmembrane helices predicted for YE0935 by TMHMM2.0 at aa 4-21%2C 28-50%2C 54-76%2C 88-107%2C111-128%2C 149-168 and 178-200;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1063086	1063154	.	+	.	ID=id1782;Note=7 probable transmembrane helices predicted for YE0935 by TMHMM2.0 at aa 4-21%2C 28-50%2C 54-76%2C 88-107%2C111-128%2C 149-168 and 178-200;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1063188	1063247	.	+	.	ID=id1782;Note=7 probable transmembrane helices predicted for YE0935 by TMHMM2.0 at aa 4-21%2C 28-50%2C 54-76%2C 88-107%2C111-128%2C 149-168 and 178-200;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1063257	1063310	.	+	.	ID=id1782;Note=7 probable transmembrane helices predicted for YE0935 by TMHMM2.0 at aa 4-21%2C 28-50%2C 54-76%2C 88-107%2C111-128%2C 149-168 and 178-200;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1063371	1063430	.	+	.	ID=id1782;Note=7 probable transmembrane helices predicted for YE0935 by TMHMM2.0 at aa 4-21%2C 28-50%2C 54-76%2C 88-107%2C111-128%2C 149-168 and 178-200;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1063458	1063526	.	+	.	ID=id1782;Note=7 probable transmembrane helices predicted for YE0935 by TMHMM2.0 at aa 4-21%2C 28-50%2C 54-76%2C 88-107%2C111-128%2C 149-168 and 178-200;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	1063638	1063757	.	+	.	ID=id1783;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 1.9%2C E-value 1.7;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	1063656	1063721	.	+	.	ID=id1784;Note=Predicted helix-turn-helix motif with score 1733.000%2C SD 5.09 at aa 244-265%2C sequence LNLSKLARKVGVPARKVSQAIN;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1063776	1063907	.	+	.	ID=id1785;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 34.4%2C E-value 1.6e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	pseudogene	1064021	1064326	.	+	.	ID=gene938;Name=YE0936;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE0936;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	1064385	1064492	.	+	.	ID=gene938;Name=YE0936;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE0936;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	1064021	1064326	.	+	0	ID=cds892;Parent=gene938;Note=Similar to many membrane transport proteins including: Salmonella typhimurium putative MFS family transport protein YhhS or Stm3581 SWALL:Q8ZLE4 (EMBL:AE008865) (419 aa) fasta scores: E(): 2.9e-20%2C51.49 38d in 134 aa and to Salmonella typhi putative membrane protein Sty4230 SWALL:Q8Z257 (EMBL:AL627281) (405 aa) fasta scores: E(): 3.8e-20%2C 52.67 38d in 131 aa. This CDS appears to have suffered a deletion following codon 102;gbkey=CDS;inference=similar to sequence:INSDC:AL627281;product=putative mfs family transport protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1064385	1064492	.	+	0	ID=cds892;Parent=gene938;Note=Similar to many membrane transport proteins including: Salmonella typhimurium putative MFS family transport protein YhhS or Stm3581 SWALL:Q8ZLE4 (EMBL:AE008865) (419 aa) fasta scores: E(): 2.9e-20%2C51.49 38d in 134 aa and to Salmonella typhi putative membrane protein Sty4230 SWALL:Q8Z257 (EMBL:AL627281) (405 aa) fasta scores: E(): 3.8e-20%2C 52.67 38d in 131 aa. This CDS appears to have suffered a deletion following codon 102;gbkey=CDS;inference=similar to sequence:INSDC:AL627281;product=putative mfs family transport protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1064099	1064167	.	+	.	ID=id1786;Note=2 probable transmembrane helices predicted for YE0936 by TMHMM2.0 at aa 27-49 and 53-72;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1064177	1064236	.	+	.	ID=id1786;Note=2 probable transmembrane helices predicted for YE0936 by TMHMM2.0 at aa 27-49 and 53-72;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	1064607	1064942	.	+	.	ID=gene939;Name=YE0937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0937
AM286415.1	EMBL	CDS	1064607	1064942	.	+	0	ID=cds893;Parent=gene939;Dbxref=EnsemblGenomes-Gn:YE0937,EnsemblGenomes-Tr:CAL11038,InterPro:IPR018994,UniProtKB/TrEMBL:A1JKC6,NCBI_GP:CAL11038.1;Name=CAL11038.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11038.1;transl_table=11
AM286415.1	EMBL	gene	1064993	1065442	.	-	.	ID=gene940;Name=yicN;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;locus_tag=YE0938
AM286415.1	EMBL	CDS	1064993	1065442	.	-	0	ID=cds894;Parent=gene940;Dbxref=EnsemblGenomes-Gn:YE0938,EnsemblGenomes-Tr:CAL11039,InterPro:IPR009587,UniProtKB/TrEMBL:A1JKC7,NCBI_GP:CAL11039.1;Name=CAL11039.1;gbkey=CDS;gene=yicN;product=putative membrane protein;protein_id=CAL11039.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1065380	1065433	.	-	.	ID=id1787;Note=1 probable transmembrane helix predicted for YE0938 by TMHMM2.0 at aa 4-21;gbkey=misc_feature;gene=yicN;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1065533	1065871	.	-	.	ID=gene941;Name=YE0939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0939
AM286415.1	EMBL	CDS	1065533	1065871	.	-	0	ID=cds895;Parent=gene941;Dbxref=EnsemblGenomes-Gn:YE0939,EnsemblGenomes-Tr:CAL11040,InterPro:IPR006983,UniProtKB/TrEMBL:A1JKC8,NCBI_GP:CAL11040.1;Name=CAL11040.1;Note=Similar to the N-terminus of Halomonas elongata MobD protein SWALL:Q9K589 (EMBL:AJ243735) (73 aa) fasta scores: E(): 0.053%2C 35.59 38d in 59 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ243735;product=hypothetical protein;protein_id=CAL11040.1;transl_table=11
AM286415.1	EMBL	gene	1066253	1066465	.	+	.	ID=gene942;Name=cspG;gbkey=Gene;gene=cspG;gene_biotype=protein_coding;gene_synonym=cspB;locus_tag=YE0940
AM286415.1	EMBL	CDS	1066253	1066465	.	+	0	ID=cds896;Parent=gene942;Dbxref=EnsemblGenomes-Gn:YE0940,EnsemblGenomes-Tr:CAL11041,GOA:A1JKC9,InterPro:IPR002059,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,InterPro:IPR019844,UniProtKB/TrEMBL:A1JKC9,NCBI_GP:CAL11041.1;Name=CAL11041.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 cold shock-like protein CspG cspG or cspI or b0990 or z1406 or ecs1145 SWALL:CSPG_ECOLI (SWALL:Q47130) (70 aa) fasta scores: E(): 1.7e-21%2C 77.14 38d in 70 aa%2C and to Yersinia pestis%2C and Yersinia enterocolitica cold shock-like protein CspB cspB or cspG or ypo2659 or y1230 SWALL:CSPB_YERPE (SWALL:O85593) (70 aa) fasta scores: E(): 6.9e-28%2C 100 38d in 70 aa%2C and to Yersinia pestis major cold shock protein CspA1 cspA1 or ypo3644 SWALL:Q8ZAY7 (EMBL:AJ414158) (70 aa) fasta scores: E(): 1.3e-25%2C 91.42 id in 70 aa;gbkey=CDS;gene=cspG;inference=similar to sequence:UniProtKB:Q47130;product=cold shock-like protein cspG;protein_id=CAL11041.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1066262	1066462	.	+	.	ID=id1788;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 152.7%2C E-value 4.3e-43;gbkey=misc_feature;gene=cspG;inference=protein motif:PFAM:PF00313
AM286415.1	EMBL	sequence_feature	1066304	1066363	.	+	.	ID=id1789;Note=PS00352 'Cold-shock' DNA-binding domain signature.;gbkey=misc_feature;gene=cspG;inference=protein motif:Prosite:PS00352
AM286415.1	EMBL	gene	1066554	1067513	.	-	.	ID=gene943;Name=YE0941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0941
AM286415.1	EMBL	CDS	1066554	1067513	.	-	0	ID=cds897;Parent=gene943;Dbxref=EnsemblGenomes-Gn:YE0941,EnsemblGenomes-Tr:CAL11042,GOA:A1JKD0,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR025628,InterPro:IPR029062,UniProtKB/TrEMBL:A1JKD0,NCBI_GP:CAL11042.1;Name=CAL11042.1;Note=Similar to many AraC-family transcriptional regulators including: Streptomyces coelicolor AraC-family transcriptional regulator AdpA or Sco2792 or Scc105.23 SWALL:Q9L062 (EMBL:AL163641) (398 aa) fasta scores: E(): 1.8e-41%2C 39.29 38d in 313 aa%2C Rhizobium loti transcriptional regulator Mll3844 SWALL:Q98FC1 (EMBL:AP003002) (332 aa) fasta scores: E(): 3e-57%2C 51.58 id in 316 aa%2C and to Caulobacter crescentus transcriptional regulator%2C AraC family cc3367 SWALL:Q9A339 (EMBL:AE005998) (324 aa) fasta scores: E(): 1.2e-52%2C 50 id in 318 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003002;product=AraC-family transcriptional regulator;protein_id=CAL11042.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1066572	1066703	.	-	.	ID=id1790;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 35.5%2C E-value 8.2e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	1066587	1066715	.	-	.	ID=id1791;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	1066722	1066859	.	-	.	ID=id1792;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 21.4%2C E-value 0.0014;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	1066980	1067498	.	-	.	ID=id1793;Note=Pfam match to entry PF01965 DJ-1_PfpI%2C DJ-1/PfpI family%2C score 59.2%2C E-value 5.8e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF01965
AM286415.1	EMBL	gene	1067634	1068071	.	+	.	ID=gene944;Name=YE0942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0942
AM286415.1	EMBL	CDS	1067634	1068071	.	+	0	ID=cds898;Parent=gene944;Dbxref=EnsemblGenomes-Gn:YE0942,EnsemblGenomes-Tr:CAL11043,InterPro:IPR001763,UniProtKB/TrEMBL:A1JKD1,NCBI_GP:CAL11043.1;Name=CAL11043.1;gbkey=CDS;product=putative rhodanese-like protein;protein_id=CAL11043.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1067724	1068005	.	+	.	ID=id1794;Note=Pfam match to entry PF00581 Rhodanese%2CRhodanese-like domain%2C score 27.3%2C E-value 2e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00581
AM286415.1	EMBL	gene	1068181	1068489	.	+	.	ID=gene945;Name=YE0943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0943
AM286415.1	EMBL	CDS	1068181	1068489	.	+	0	ID=cds899;Parent=gene945;Dbxref=EnsemblGenomes-Gn:YE0943,EnsemblGenomes-Tr:CCP19175,UniProtKB/TrEMBL:K8FID0,NCBI_GP:CCP19175.1;Name=CCP19175.1;gbkey=CDS;product=hypothetical protein;protein_id=CCP19175.1;transl_table=11
AM286415.1	EMBL	pseudogene	1068604	1069018	.	+	.	ID=gene946;Name=YE0944;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0944;pseudo=true
AM286415.1	EMBL	CDS	1068604	1068711	.	+	0	ID=cds900;Parent=gene946;Note=stop codon introduced%2C frameshift%2C missing 130 aa due to deletion event;gbkey=CDS;product=hypothetical protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1068715	1068897	.	+	0	ID=cds900;Parent=gene946;Note=stop codon introduced%2C frameshift%2C missing 130 aa due to deletion event;gbkey=CDS;product=hypothetical protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1068902	1069018	.	+	0	ID=cds900;Parent=gene946;Note=stop codon introduced%2C frameshift%2C missing 130 aa due to deletion event;gbkey=CDS;product=hypothetical protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	1069617	1071200	.	+	.	ID=gene947;Name=YE0946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0946
AM286415.1	EMBL	CDS	1069617	1071200	.	+	0	ID=cds901;Parent=gene947;Dbxref=EnsemblGenomes-Gn:YE0946,EnsemblGenomes-Tr:CAL11044,GOA:A1JKD2,InterPro:IPR000914,UniProtKB/TrEMBL:A1JKD2,NCBI_GP:CAL11044.1;Name=CAL11044.1;gbkey=CDS;product=putative solute-binding protein;protein_id=CAL11044.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1069629	1069697	.	+	.	ID=id1795;Note=1 probable transmembrane helix predicted for YE0946 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1069644	1071164	.	+	.	ID=id1796;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 101.7%2C E-value 9.7e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	gene	1071200	1072168	.	+	.	ID=gene948;Name=YE0947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0947
AM286415.1	EMBL	CDS	1071200	1072168	.	+	0	ID=cds902;Parent=gene948;Dbxref=EnsemblGenomes-Gn:YE0947,EnsemblGenomes-Tr:CAL11045,GOA:A1JKD3,InterPro:IPR000515,UniProtKB/TrEMBL:A1JKD3,NCBI_GP:CAL11045.1;Name=CAL11045.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11045.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1071218	1071286	.	+	.	ID=id1797;Note=6 probable transmembrane helices predicted for YE0947 by TMHMM2.0 at aa 7-29%2C 98-120%2C 133-155%2C 188-205%2C242-264 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1071491	1071559	.	+	.	ID=id1797;Note=6 probable transmembrane helices predicted for YE0947 by TMHMM2.0 at aa 7-29%2C 98-120%2C 133-155%2C 188-205%2C242-264 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1071596	1071664	.	+	.	ID=id1797;Note=6 probable transmembrane helices predicted for YE0947 by TMHMM2.0 at aa 7-29%2C 98-120%2C 133-155%2C 188-205%2C242-264 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1071761	1071814	.	+	.	ID=id1797;Note=6 probable transmembrane helices predicted for YE0947 by TMHMM2.0 at aa 7-29%2C 98-120%2C 133-155%2C 188-205%2C242-264 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1071923	1071991	.	+	.	ID=id1797;Note=6 probable transmembrane helices predicted for YE0947 by TMHMM2.0 at aa 7-29%2C 98-120%2C 133-155%2C 188-205%2C242-264 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1072064	1072132	.	+	.	ID=id1797;Note=6 probable transmembrane helices predicted for YE0947 by TMHMM2.0 at aa 7-29%2C 98-120%2C 133-155%2C 188-205%2C242-264 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	1072165	1072971	.	+	.	ID=gene949;Name=YE0948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0948
AM286415.1	EMBL	CDS	1072165	1072971	.	+	0	ID=cds903;Parent=gene949;Dbxref=EnsemblGenomes-Gn:YE0948,EnsemblGenomes-Tr:CAL11046,GOA:A1JKD4,InterPro:IPR000515,UniProtKB/TrEMBL:A1JKD4,NCBI_GP:CAL11046.1;Name=CAL11046.1;gbkey=CDS;product=binding-protein-dependent transport protein;protein_id=CAL11046.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1072198	1072266	.	+	.	ID=id1798;Note=6 probable transmembrane helices predicted for YE0948 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 132-154%2C180-202 and 234-253;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1072378	1072446	.	+	.	ID=id1798;Note=6 probable transmembrane helices predicted for YE0948 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 132-154%2C180-202 and 234-253;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1072480	1072548	.	+	.	ID=id1798;Note=6 probable transmembrane helices predicted for YE0948 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 132-154%2C180-202 and 234-253;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1072558	1072626	.	+	.	ID=id1798;Note=6 probable transmembrane helices predicted for YE0948 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 132-154%2C180-202 and 234-253;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1072702	1072770	.	+	.	ID=id1798;Note=6 probable transmembrane helices predicted for YE0948 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 132-154%2C180-202 and 234-253;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1072864	1072923	.	+	.	ID=id1798;Note=6 probable transmembrane helices predicted for YE0948 by TMHMM2.0 at aa 12-34%2C 72-94%2C 106-128%2C 132-154%2C180-202 and 234-253;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1072621	1072851	.	+	.	ID=id1799;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 21.5%2C E-value 0.00046;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	1072971	1073777	.	+	.	ID=gene950;Name=YE0949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0949
AM286415.1	EMBL	CDS	1072971	1073777	.	+	0	ID=cds904;Parent=gene950;Dbxref=EnsemblGenomes-Gn:YE0949,EnsemblGenomes-Tr:CAL11047,GOA:A1JKD5,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR027417,UniProtKB/TrEMBL:A1JKD5,NCBI_GP:CAL11047.1;Name=CAL11047.1;gbkey=CDS;product=putative transport ATPase;protein_id=CAL11047.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1073076	1073636	.	+	.	ID=id1800;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 114.2%2C E-value 1.6e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1073097	1073120	.	+	.	ID=id1801;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1073770	1074435	.	+	.	ID=gene951;Name=YE0950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0950
AM286415.1	EMBL	CDS	1073770	1074435	.	+	0	ID=cds905;Parent=gene951;Dbxref=EnsemblGenomes-Gn:YE0950,EnsemblGenomes-Tr:CAL11048,GOA:A1JKD6,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JKD6,NCBI_GP:CAL11048.1;Name=CAL11048.1;gbkey=CDS;product=putative transport ATPase;protein_id=CAL11048.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1073848	1074363	.	+	.	ID=id1802;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 80.4%2C E-value 2.5e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1073869	1073892	.	+	.	ID=id1803;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1074133	1074177	.	+	.	ID=id1804;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	1075582	1075884	.	+	.	ID=gene952;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;gene_synonym=yeuA;locus_tag=YE0951
AM286415.1	EMBL	CDS	1075582	1075884	.	+	0	ID=cds906;Parent=gene952;Dbxref=EnsemblGenomes-Gn:YE0951,EnsemblGenomes-Tr:CAL11049,GOA:A1JKD7,InterPro:IPR002026,InterPro:IPR012010,NCBI_GP:CAL11049.1;Name=CAL11049.1;gbkey=CDS;gene=ureA;product=urease gamma subunit;protein_id=CAL11049.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1075582	1075878	.	+	.	ID=id1805;Note=Pfam match to entry PF00547 urease_gamma%2C Urease%2Cgamma subunit%2C score 277.4%2C E-value 1.2e-80;gbkey=misc_feature;gene=ureA;inference=protein motif:PFAM:PF00547
AM286415.1	EMBL	gene	1075938	1076432	.	+	.	ID=gene953;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=YE0952
AM286415.1	EMBL	CDS	1075938	1076432	.	+	0	ID=cds907;Parent=gene953;Dbxref=EnsemblGenomes-Gn:YE0952,EnsemblGenomes-Tr:CAL11050,GOA:A1JKD8,InterPro:IPR002019,NCBI_GP:CAL11050.1;Name=CAL11050.1;Note=Previously sequenced as Yersinia enterocolitica urease beta subunit UreB or YeuB SWALL:URE2_YEREN (SWALL:P31495) (163 aa) fasta scores: E(): 1.2e-62%2C 98.77 id in 163 aa. Also similar to Yersinia pestis%2C and Yersinia pseudotuberculosis urease beta subunit UreB or Ypo2666 or Y1238 SWALL:URE2_YERPE (SWALL:P52314) (144 aa) fasta scores: E(): 1.5e-49%2C 92.14 38d in 140 aa;gbkey=CDS;gene=ureB;inference=similar to sequence:UniProtKB:P52314;product=urease beta subunit;protein_id=CAL11050.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1076109	1076348	.	+	.	ID=id1806;Note=Pfam match to entry PF00699 Urease_beta%2C Urease beta subunit%2C score 186.8%2C E-value 2.2e-53;gbkey=misc_feature;gene=ureB;inference=protein motif:PFAM:PF00699
AM286415.1	EMBL	gene	1076597	1078315	.	+	.	ID=gene954;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;gene_synonym=yeuC;locus_tag=YE0953
AM286415.1	EMBL	CDS	1076597	1078315	.	+	0	ID=cds908;Parent=gene954;Dbxref=EnsemblGenomes-Gn:YE0953,EnsemblGenomes-Tr:CAL11051,GOA:A1JKD9,InterPro:IPR005848,InterPro:IPR006680,InterPro:IPR011059,InterPro:IPR011612,InterPro:IPR017950,InterPro:IPR017951,InterPro:IPR029754,NCBI_GP:CAL11051.1;Name=CAL11051.1;gbkey=CDS;gene=ureC;product=urease alpha subunit;protein_id=CAL11051.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1076600	1076995	.	+	.	ID=id1807;Note=Pfam match to entry PF00449 urease%2C Urease alpha-subunit%2C N-terminal domain%2C score 322.4%2C E-value 3.4e-94;gbkey=misc_feature;gene=ureC;inference=protein motif:PFAM:PF00449
AM286415.1	EMBL	sequence_feature	1076990	1077031	.	+	.	ID=id1808;Note=PS01120 Urease nickel ligands signature.;gbkey=misc_feature;gene=ureC;inference=protein motif:Prosite:PS01120
AM286415.1	EMBL	sequence_feature	1076999	1078309	.	+	.	ID=id1809;Note=Pfam match to entry PF02802 urease_C%2C Urease alpha-subunit%2C catalytic domain%2C score 1158.6%2C E-value 0;gbkey=misc_feature;gene=ureC;inference=protein motif:PFAM:PF02802
AM286415.1	EMBL	sequence_feature	1077560	1077610	.	+	.	ID=id1810;Note=PS00145 Urease active site.;gbkey=misc_feature;gene=ureC;inference=protein motif:Prosite:PS00145
AM286415.1	EMBL	gene	1078489	1079181	.	+	.	ID=gene955;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=YE0954
AM286415.1	EMBL	CDS	1078489	1079181	.	+	0	ID=cds909;Parent=gene955;Dbxref=EnsemblGenomes-Gn:YE0954,EnsemblGenomes-Tr:CAL11052,GOA:A1JKE0,InterPro:IPR004029,InterPro:IPR007864,InterPro:IPR012406,NCBI_GP:CAL11052.1;Name=CAL11052.1;gbkey=CDS;gene=ureE;product=urease accessory protein;protein_id=CAL11052.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1078504	1078854	.	+	.	ID=id1811;Note=Pfam match to entry PF02814 UreE%2C UreE urease accessory protein%2C score 156.8%2C E-value 2.4e-44;gbkey=misc_feature;gene=ureE;inference=protein motif:PFAM:PF02814
AM286415.1	EMBL	gene	1079203	1079889	.	+	.	ID=gene956;Name=ureF;gbkey=Gene;gene=ureF;gene_biotype=protein_coding;locus_tag=YE0955
AM286415.1	EMBL	CDS	1079203	1079889	.	+	0	ID=cds910;Parent=gene956;Dbxref=EnsemblGenomes-Gn:YE0955,EnsemblGenomes-Tr:CAL11053,GOA:A1JKE1,InterPro:IPR002639,NCBI_GP:CAL11053.1;Name=CAL11053.1;gbkey=CDS;gene=ureF;product=urease accessory protein;protein_id=CAL11053.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1079308	1079766	.	+	.	ID=id1812;Note=Pfam match to entry PF01730 UreF%2C UreF%2C score 233.7%2C E-value 1.7e-67;gbkey=misc_feature;gene=ureF;inference=protein motif:PFAM:PF01730
AM286415.1	EMBL	gene	1080067	1080672	.	+	.	ID=gene957;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=YE0956
AM286415.1	EMBL	CDS	1080067	1080672	.	+	0	ID=cds911;Parent=gene957;Dbxref=EnsemblGenomes-Gn:YE0956,EnsemblGenomes-Tr:CAL11054,GOA:A1JKE2,InterPro:IPR003495,InterPro:IPR004400,InterPro:IPR012202,InterPro:IPR027417,NCBI_GP:CAL11054.1;Name=CAL11054.1;gbkey=CDS;gene=ureG;product=urease accessory protein;protein_id=CAL11054.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1080070	1080432	.	+	.	ID=id1813;Note=Pfam match to entry PF01495 HypB_UreG%2C HypB/UreG nucleotide-binding domain%2C score 203.6%2C E-value 1.9e-58;gbkey=misc_feature;gene=ureG;inference=protein motif:PFAM:PF01495
AM286415.1	EMBL	gene	1080669	1081652	.	+	.	ID=gene958;Name=ureD;gbkey=Gene;gene=ureD;gene_biotype=protein_coding;locus_tag=YE0957
AM286415.1	EMBL	CDS	1080669	1081652	.	+	0	ID=cds912;Parent=gene958;Dbxref=EnsemblGenomes-Gn:YE0957,EnsemblGenomes-Tr:CAL11055,GOA:A1JKE3,InterPro:IPR002669,NCBI_GP:CAL11055.1;Name=CAL11055.1;Note=Previously sequenced from several yersinias including: Yersinia pseudotuberculosis urease accessory protein UreD SWALL:URED_YERPS (SWALL:P52316) (321 aa) fasta scores: E(): 2.7e-122%2C 92.66 38d in 327 aa and Yersinia enterocolitica urease accessory protein UreD SWALL:URED_YEREN (SWALL:P42868) (325 aa) fasta scores: E(): 3.1e-124%2C 98.71 38d in 310 aa. Note the very N-terminal portion of this protein is identical to that of Y. pseudotuberculosis and Y. pestis (not shown) and differs from that previously published for Y. enterocolitica.;gbkey=CDS;gene=ureD;inference=similar to sequence:UniProtKB:P52316;product=urease accessory protein;protein_id=CAL11055.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1080924	1080956	.	+	.	ID=id1814;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ureD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1080927	1081580	.	+	.	ID=id1815;Note=Pfam match to entry PF01774 UreD%2C UreD urease accessory protein%2C score 337.1%2C E-value 1.3e-98;gbkey=misc_feature;gene=ureD;inference=protein motif:PFAM:PF01774
AM286415.1	EMBL	gene	1081767	1082756	.	+	.	ID=gene959;Name=YE0958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0958
AM286415.1	EMBL	CDS	1081767	1082756	.	+	0	ID=cds913;Parent=gene959;Dbxref=EnsemblGenomes-Gn:YE0958,EnsemblGenomes-Tr:CAL11056,GOA:A1JKE4,InterPro:IPR004937,InterPro:IPR017807,InterPro:IPR029020,UniProtKB/TrEMBL:A1JKE4,NCBI_GP:CAL11056.1;Name=CAL11056.1;gbkey=CDS;product=putative urea transporter;protein_id=CAL11056.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1081827	1082753	.	+	.	ID=id1816;Note=Pfam match to entry PF03253 UT%2C Urea transporter %2Cscore 114.6%2C E-value 1.2e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF03253
AM286415.1	EMBL	sequence_feature	1081866	1081934	.	+	.	ID=id1817;Note=10 probable transmembrane helices predicted for YE0958 by TMHMM2.0 at aa 34-56%2C 61-78%2C 90-107%2C 112-134%2C139-161%2C 196-218%2C 220-242%2C 246-268%2C 275-292 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1081947	1082000	.	+	.	ID=id1817;Note=10 probable transmembrane helices predicted for YE0958 by TMHMM2.0 at aa 34-56%2C 61-78%2C 90-107%2C 112-134%2C139-161%2C 196-218%2C 220-242%2C 246-268%2C 275-292 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1082034	1082087	.	+	.	ID=id1817;Note=10 probable transmembrane helices predicted for YE0958 by TMHMM2.0 at aa 34-56%2C 61-78%2C 90-107%2C 112-134%2C139-161%2C 196-218%2C 220-242%2C 246-268%2C 275-292 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1082100	1082168	.	+	.	ID=id1817;Note=10 probable transmembrane helices predicted for YE0958 by TMHMM2.0 at aa 34-56%2C 61-78%2C 90-107%2C 112-134%2C139-161%2C 196-218%2C 220-242%2C 246-268%2C 275-292 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1082181	1082249	.	+	.	ID=id1817;Note=10 probable transmembrane helices predicted for YE0958 by TMHMM2.0 at aa 34-56%2C 61-78%2C 90-107%2C 112-134%2C139-161%2C 196-218%2C 220-242%2C 246-268%2C 275-292 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1082352	1082420	.	+	.	ID=id1817;Note=10 probable transmembrane helices predicted for YE0958 by TMHMM2.0 at aa 34-56%2C 61-78%2C 90-107%2C 112-134%2C139-161%2C 196-218%2C 220-242%2C 246-268%2C 275-292 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1082424	1082492	.	+	.	ID=id1817;Note=10 probable transmembrane helices predicted for YE0958 by TMHMM2.0 at aa 34-56%2C 61-78%2C 90-107%2C 112-134%2C139-161%2C 196-218%2C 220-242%2C 246-268%2C 275-292 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1082502	1082570	.	+	.	ID=id1817;Note=10 probable transmembrane helices predicted for YE0958 by TMHMM2.0 at aa 34-56%2C 61-78%2C 90-107%2C 112-134%2C139-161%2C 196-218%2C 220-242%2C 246-268%2C 275-292 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1082589	1082642	.	+	.	ID=id1817;Note=10 probable transmembrane helices predicted for YE0958 by TMHMM2.0 at aa 34-56%2C 61-78%2C 90-107%2C 112-134%2C139-161%2C 196-218%2C 220-242%2C 246-268%2C 275-292 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1082652	1082720	.	+	.	ID=id1817;Note=10 probable transmembrane helices predicted for YE0958 by TMHMM2.0 at aa 34-56%2C 61-78%2C 90-107%2C 112-134%2C139-161%2C 196-218%2C 220-242%2C 246-268%2C 275-292 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	1082780	1083838	.	+	.	ID=gene960;Name=YE0959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0959
AM286415.1	EMBL	CDS	1082780	1083838	.	+	0	ID=cds914;Parent=gene960;Dbxref=EnsemblGenomes-Gn:YE0959,EnsemblGenomes-Tr:CAL11057,GOA:A1JKE5,InterPro:IPR004688,InterPro:IPR011541,UniProtKB/TrEMBL:A1JKE5,NCBI_GP:CAL11057.1;Name=CAL11057.1;gbkey=CDS;product=putative nickel transport protein;protein_id=CAL11057.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1082837	1082890	.	+	.	ID=id1818;Note=8 probable transmembrane helices predicted for YE0959 by TMHMM2.0 at aa 20-37%2C 47-64%2C 86-108%2C 128-150%2C196-218%2C 228-250%2C 271-293 and 320-342;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	1082918	1082971	.	+	.	ID=id1818;Note=8 probable transmembrane helices predicted for YE0959 by TMHMM2.0 at aa 20-37%2C 47-64%2C 86-108%2C 128-150%2C196-218%2C 228-250%2C 271-293 and 320-342;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	1083035	1083103	.	+	.	ID=id1818;Note=8 probable transmembrane helices predicted for YE0959 by TMHMM2.0 at aa 20-37%2C 47-64%2C 86-108%2C 128-150%2C196-218%2C 228-250%2C 271-293 and 320-342;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	1083161	1083229	.	+	.	ID=id1818;Note=8 probable transmembrane helices predicted for YE0959 by TMHMM2.0 at aa 20-37%2C 47-64%2C 86-108%2C 128-150%2C196-218%2C 228-250%2C 271-293 and 320-342;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	1083365	1083433	.	+	.	ID=id1818;Note=8 probable transmembrane helices predicted for YE0959 by TMHMM2.0 at aa 20-37%2C 47-64%2C 86-108%2C 128-150%2C196-218%2C 228-250%2C 271-293 and 320-342;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	1083461	1083529	.	+	.	ID=id1818;Note=8 probable transmembrane helices predicted for YE0959 by TMHMM2.0 at aa 20-37%2C 47-64%2C 86-108%2C 128-150%2C196-218%2C 228-250%2C 271-293 and 320-342;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	1083590	1083658	.	+	.	ID=id1818;Note=8 probable transmembrane helices predicted for YE0959 by TMHMM2.0 at aa 20-37%2C 47-64%2C 86-108%2C 128-150%2C196-218%2C 228-250%2C 271-293 and 320-342;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	1083737	1083805	.	+	.	ID=id1818;Note=8 probable transmembrane helices predicted for YE0959 by TMHMM2.0 at aa 20-37%2C 47-64%2C 86-108%2C 128-150%2C196-218%2C 228-250%2C 271-293 and 320-342;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	1082933	1083778	.	+	.	ID=id1819;Note=Pfam match to entry PF03824 NicO%2C High-affinity nickel-transport protein%2C score 598.3%2C E-value 3.1e-177;gbkey=misc_feature;inference=protein motif:PFAM:PF03824
AM286415.1	EMBL	gene	1083904	1084236	.	-	.	ID=gene961;Name=YE0960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0960
AM286415.1	EMBL	CDS	1083904	1084236	.	-	0	ID=cds915;Parent=gene961;Dbxref=EnsemblGenomes-Gn:YE0960,EnsemblGenomes-Tr:CAL11058,GOA:A1JKE6,InterPro:IPR010486,InterPro:IPR024972,InterPro:IPR028623,UniProtKB/TrEMBL:A1JKE6,NCBI_GP:CAL11058.1;Name=CAL11058.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11058.1;transl_table=11
AM286415.1	EMBL	gene	1084592	1085767	.	+	.	ID=gene962;Name=YE0961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0961
AM286415.1	EMBL	CDS	1084592	1085767	.	+	0	ID=cds916;Parent=gene962;Dbxref=EnsemblGenomes-Gn:YE0961,EnsemblGenomes-Tr:CAL11059,GOA:A1JKE7,InterPro:IPR003091,InterPro:IPR003148,InterPro:IPR013099,InterPro:IPR016040,UniProtKB/TrEMBL:A1JKE7,NCBI_GP:CAL11059.1;Name=CAL11059.1;gbkey=CDS;product=putative potassium channel protein;protein_id=CAL11059.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1084625	1084693	.	+	.	ID=id1820;Note=7 probable transmembrane helices predicted for YE0961 by TMHMM2.0 at aa 12-34%2C 56-78%2C 85-104%2C 110-125%2C132-154%2C 169-188 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1084757	1084825	.	+	.	ID=id1820;Note=7 probable transmembrane helices predicted for YE0961 by TMHMM2.0 at aa 12-34%2C 56-78%2C 85-104%2C 110-125%2C132-154%2C 169-188 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1084844	1084903	.	+	.	ID=id1820;Note=7 probable transmembrane helices predicted for YE0961 by TMHMM2.0 at aa 12-34%2C 56-78%2C 85-104%2C 110-125%2C132-154%2C 169-188 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1084919	1084966	.	+	.	ID=id1820;Note=7 probable transmembrane helices predicted for YE0961 by TMHMM2.0 at aa 12-34%2C 56-78%2C 85-104%2C 110-125%2C132-154%2C 169-188 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1084985	1085053	.	+	.	ID=id1820;Note=7 probable transmembrane helices predicted for YE0961 by TMHMM2.0 at aa 12-34%2C 56-78%2C 85-104%2C 110-125%2C132-154%2C 169-188 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1085096	1085155	.	+	.	ID=id1820;Note=7 probable transmembrane helices predicted for YE0961 by TMHMM2.0 at aa 12-34%2C 56-78%2C 85-104%2C 110-125%2C132-154%2C 169-188 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1085189	1085257	.	+	.	ID=id1820;Note=7 probable transmembrane helices predicted for YE0961 by TMHMM2.0 at aa 12-34%2C 56-78%2C 85-104%2C 110-125%2C132-154%2C 169-188 and 200-222;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	1084748	1085242	.	+	.	ID=id1821;Note=Pfam match to entry PF00520 ion_trans%2C Ion transport protein%2C score 21.2%2C E-value 0.00065;gbkey=misc_feature;inference=protein motif:PFAM:PF00520
AM286415.1	EMBL	sequence_feature	1085315	1085662	.	+	.	ID=id1822;Note=Pfam match to entry PF02254 TrkA-N%2C TrkA-N domain %2Cscore 41.0%2C E-value 1.8e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF02254
AM286415.1	EMBL	gene	1085778	1086008	.	-	.	ID=gene963;Name=YE0962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0962
AM286415.1	EMBL	CDS	1085778	1086008	.	-	0	ID=cds917;Parent=gene963;Dbxref=EnsemblGenomes-Gn:YE0962,EnsemblGenomes-Tr:CAL11060,UniProtKB/TrEMBL:A1JKE8,NCBI_GP:CAL11060.1;Name=CAL11060.1;Note=doubtful CDS which is similar in parts to Yersinia pestis hypothetical protein Ypo2189 SWALL:Q8ZEI1 (EMBL:AJ414151) (82 aa) fasta scores: E(): 6.7e-08%2C 62.5 id in 56 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=hypothetical protein;protein_id=CAL11060.1;transl_table=11
AM286415.1	EMBL	gene	1086013	1086417	.	-	.	ID=gene964;Name=YE0963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0963
AM286415.1	EMBL	CDS	1086013	1086417	.	-	0	ID=cds918;Parent=gene964;Dbxref=EnsemblGenomes-Gn:YE0963,EnsemblGenomes-Tr:CAL11061,GOA:A1JKE9,InterPro:IPR003691,UniProtKB/TrEMBL:A1JKE9,NCBI_GP:CAL11061.1;Name=CAL11061.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11061.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1086055	1086405	.	-	.	ID=id1823;Note=Pfam match to entry PF02537 CRCB%2C CrcB-like protein%2C score 89.8%2C E-value 3.6e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF02537
AM286415.1	EMBL	sequence_feature	1086349	1086405	.	-	.	ID=id1824;Note=4 probable transmembrane helices predicted for YE0963 by TMHMM2.0 at aa 5-23%2C 33-55%2C 64-86 and 96-118;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1086253	1086321	.	-	.	ID=id1824;Note=4 probable transmembrane helices predicted for YE0963 by TMHMM2.0 at aa 5-23%2C 33-55%2C 64-86 and 96-118;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1086160	1086228	.	-	.	ID=id1824;Note=4 probable transmembrane helices predicted for YE0963 by TMHMM2.0 at aa 5-23%2C 33-55%2C 64-86 and 96-118;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1086064	1086132	.	-	.	ID=id1824;Note=4 probable transmembrane helices predicted for YE0963 by TMHMM2.0 at aa 5-23%2C 33-55%2C 64-86 and 96-118;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1086487	1086867	.	-	.	ID=gene965;Name=YE0964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0964
AM286415.1	EMBL	CDS	1086487	1086867	.	-	0	ID=cds919;Parent=gene965;Dbxref=EnsemblGenomes-Gn:YE0964,EnsemblGenomes-Tr:CAL11062,GOA:A1JKF0,InterPro:IPR003691,UniProtKB/TrEMBL:A1JKF0,NCBI_GP:CAL11062.1;Name=CAL11062.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11062.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1086493	1086852	.	-	.	ID=id1825;Note=Pfam match to entry PF02537 CRCB%2C CrcB-like protein%2C score 94.3%2C E-value 1.5e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF02537
AM286415.1	EMBL	sequence_feature	1086796	1086849	.	-	.	ID=id1826;Note=4 probable transmembrane helices predicted for YE0964 by TMHMM2.0 at aa 7-24%2C 39-61%2C 68-87 and 102-124;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1086685	1086753	.	-	.	ID=id1826;Note=4 probable transmembrane helices predicted for YE0964 by TMHMM2.0 at aa 7-24%2C 39-61%2C 68-87 and 102-124;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1086607	1086666	.	-	.	ID=id1826;Note=4 probable transmembrane helices predicted for YE0964 by TMHMM2.0 at aa 7-24%2C 39-61%2C 68-87 and 102-124;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1086496	1086564	.	-	.	ID=id1826;Note=4 probable transmembrane helices predicted for YE0964 by TMHMM2.0 at aa 7-24%2C 39-61%2C 68-87 and 102-124;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1087056	1088090	.	+	.	ID=gene966;Name=YE0965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0965
AM286415.1	EMBL	CDS	1087056	1088090	.	+	0	ID=cds920;Parent=gene966;Dbxref=EnsemblGenomes-Gn:YE0965,EnsemblGenomes-Tr:CAL11063,InterPro:IPR001395,InterPro:IPR023210,UniProtKB/TrEMBL:A1JKF1,NCBI_GP:CAL11063.1;Name=CAL11063.1;Note=Similar to many including: Escherichia coli O157:H7 hypothetical protein YghZ or z4354 or ecs3885 SWALL:YGHZ_ECO57 (SWALL:Q8X529) (346 aa) fasta scores: E(): 1.2e-109%2C 79.19 38d in 346 aa%2C Streptomyces coelicolor putative oxidoreductase Sco7594 or Sc7h9.06 SWALL:Q9EWJ0 (EMBL:AL450223) (348 aa) fasta scores: E(): 3.9e-80%2C 60.81 38d in 342 aa and to several Eukaryotic potassium channel accessory proteins e.g. Xenopus laevis voltage-gated potassium channel beta-2 subunit Kcnab2 or kvb-a or kvb2 SWALL:KVB2_XENLA (SWALL:Q9PTM5) (367 aa) fasta scores: E(): 2e-31%2C 36.87 38d in 339 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9PTM5;product=putative oxidoreductase;protein_id=CAL11063.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1087110	1088054	.	+	.	ID=id1827;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 260.6%2C E-value 1.4e-75;gbkey=misc_feature;inference=protein motif:PFAM:PF00248
AM286415.1	EMBL	gene	1088342	1089505	.	-	.	ID=gene967;Name=YE0966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0966
AM286415.1	EMBL	CDS	1088342	1089505	.	-	0	ID=cds921;Parent=gene967;Dbxref=EnsemblGenomes-Gn:YE0966,EnsemblGenomes-Tr:CAL11064,GOA:A1JKF2,InterPro:IPR011041,InterPro:IPR011042,InterPro:IPR012938,UniProtKB/TrEMBL:A1JKF2,NCBI_GP:CAL11064.1;Name=CAL11064.1;Note=Similar to many including: Escherichia coli O157:H7 putative dehydrogenase YliI or Z1063 or Ecs0917 SWALL:Q8X6U6 (EMBL:AE005265) (371 aa) fasta scores: E(): 3e-95%2C 65.31 38d in 369 aa and to Salmonella typhi putative oxidoreductase YliI or Sty0894 SWALL:Q8Z860 (EMBL:AL627268) (373 aa) fasta scores: E(): 1.9e-94%2C65.58 38d in 369 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627268;product=putative exported protein;protein_id=CAL11064.1;transl_table=11
AM286415.1	EMBL	gene	1090080	1090397	.	+	.	ID=gene968;Name=celA;gbkey=Gene;gene=celA;gene_biotype=protein_coding;locus_tag=YE0967
AM286415.1	EMBL	CDS	1090080	1090397	.	+	0	ID=cds922;Parent=gene968;Dbxref=EnsemblGenomes-Gn:YE0967,EnsemblGenomes-Tr:CAL11065,GOA:A1JKF3,InterPro:IPR003501,InterPro:IPR013012,UniProtKB/TrEMBL:A1JKF3,NCBI_GP:CAL11065.1;Name=CAL11065.1;gbkey=CDS;gene=celA;product=PTS system%2C cellobiose-specific IIB component;protein_id=CAL11065.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1090089	1090358	.	+	.	ID=id1828;Note=Pfam match to entry PF02302 PTS_IIB%2C PTS system%2CLactose/Cellobiose specific IIB subunit%2C score 167.8%2CE-value 1.2e-47;gbkey=misc_feature;gene=celA;inference=protein motif:PFAM:PF02302
AM286415.1	EMBL	gene	1090408	1091769	.	+	.	ID=gene969;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=YE0968
AM286415.1	EMBL	CDS	1090408	1091769	.	+	0	ID=cds923;Parent=gene969;Dbxref=EnsemblGenomes-Gn:YE0968,EnsemblGenomes-Tr:CAL11066,GOA:A1JKF4,InterPro:IPR003352,InterPro:IPR004501,InterPro:IPR004796,UniProtKB/TrEMBL:A1JKF4,NCBI_GP:CAL11066.1;Name=CAL11066.1;gbkey=CDS;gene=celB;product=PTS system%2C cellobiose-specific IIC component;protein_id=CAL11066.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1090498	1090566	.	+	.	ID=id1829;Note=10 probable transmembrane helices predicted for YE0968 by TMHMM2.0 at aa 31-53%2C 81-103%2C 115-134%2C 144-166%2C187-209%2C 229-251%2C 264-286%2C 301-320%2C 356-378 and 406-428;gbkey=misc_feature;gene=celB;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1090648	1090716	.	+	.	ID=id1829;Note=10 probable transmembrane helices predicted for YE0968 by TMHMM2.0 at aa 31-53%2C 81-103%2C 115-134%2C 144-166%2C187-209%2C 229-251%2C 264-286%2C 301-320%2C 356-378 and 406-428;gbkey=misc_feature;gene=celB;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1090750	1090809	.	+	.	ID=id1829;Note=10 probable transmembrane helices predicted for YE0968 by TMHMM2.0 at aa 31-53%2C 81-103%2C 115-134%2C 144-166%2C187-209%2C 229-251%2C 264-286%2C 301-320%2C 356-378 and 406-428;gbkey=misc_feature;gene=celB;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1090837	1090905	.	+	.	ID=id1829;Note=10 probable transmembrane helices predicted for YE0968 by TMHMM2.0 at aa 31-53%2C 81-103%2C 115-134%2C 144-166%2C187-209%2C 229-251%2C 264-286%2C 301-320%2C 356-378 and 406-428;gbkey=misc_feature;gene=celB;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1090966	1091034	.	+	.	ID=id1829;Note=10 probable transmembrane helices predicted for YE0968 by TMHMM2.0 at aa 31-53%2C 81-103%2C 115-134%2C 144-166%2C187-209%2C 229-251%2C 264-286%2C 301-320%2C 356-378 and 406-428;gbkey=misc_feature;gene=celB;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1091092	1091160	.	+	.	ID=id1829;Note=10 probable transmembrane helices predicted for YE0968 by TMHMM2.0 at aa 31-53%2C 81-103%2C 115-134%2C 144-166%2C187-209%2C 229-251%2C 264-286%2C 301-320%2C 356-378 and 406-428;gbkey=misc_feature;gene=celB;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1091197	1091265	.	+	.	ID=id1829;Note=10 probable transmembrane helices predicted for YE0968 by TMHMM2.0 at aa 31-53%2C 81-103%2C 115-134%2C 144-166%2C187-209%2C 229-251%2C 264-286%2C 301-320%2C 356-378 and 406-428;gbkey=misc_feature;gene=celB;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1091308	1091367	.	+	.	ID=id1829;Note=10 probable transmembrane helices predicted for YE0968 by TMHMM2.0 at aa 31-53%2C 81-103%2C 115-134%2C 144-166%2C187-209%2C 229-251%2C 264-286%2C 301-320%2C 356-378 and 406-428;gbkey=misc_feature;gene=celB;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1091473	1091541	.	+	.	ID=id1829;Note=10 probable transmembrane helices predicted for YE0968 by TMHMM2.0 at aa 31-53%2C 81-103%2C 115-134%2C 144-166%2C187-209%2C 229-251%2C 264-286%2C 301-320%2C 356-378 and 406-428;gbkey=misc_feature;gene=celB;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1091623	1091691	.	+	.	ID=id1829;Note=10 probable transmembrane helices predicted for YE0968 by TMHMM2.0 at aa 31-53%2C 81-103%2C 115-134%2C 144-166%2C187-209%2C 229-251%2C 264-286%2C 301-320%2C 356-378 and 406-428;gbkey=misc_feature;gene=celB;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	1090573	1091472	.	+	.	ID=id1830;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 93.2%2C E-value 3.4e-25;gbkey=misc_feature;gene=celB;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	gene	1091808	1093193	.	+	.	ID=gene970;Name=YE0969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0969
AM286415.1	EMBL	CDS	1091808	1093193	.	+	0	ID=cds924;Parent=gene970;Dbxref=EnsemblGenomes-Gn:YE0969,EnsemblGenomes-Tr:CAL11067,GOA:A1JKF5,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018120,UniProtKB/TrEMBL:A1JKF5,NCBI_GP:CAL11067.1;Name=CAL11067.1;Note=Similar to many glycosyl hydrolases including: Salmonella typhi putative Sty4009 SWALL:Q8Z2J8 (EMBL:AL627280) (460 aa) fasta scores: E(): 2.3e-135%2C64.85 38d in 461 aa and to Caldocellum saccharolyticum beta-glucosidase A BglA SWALL:BGLS_CALSA (SWALL:P10482) (455 aa) fasta scores: E(): 8.6e-54%2C 33.33 38d in 468 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P10482;product=putative glycosyl hydrolase;protein_id=CAL11067.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1091808	1093190	.	+	.	ID=id1831;Note=Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1%2C score 490.5%2C E-value 8.3e-145;gbkey=misc_feature;inference=protein motif:PFAM:PF00232
AM286415.1	EMBL	sequence_feature	1091874	1091897	.	+	.	ID=id1832;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1092885	1092911	.	+	.	ID=id1833;Note=PS00572 Glycosyl hydrolases family 1 active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00572
AM286415.1	EMBL	gene	1093222	1093569	.	+	.	ID=gene971;Name=celC;gbkey=Gene;gene=celC;gene_biotype=protein_coding;locus_tag=YE0970
AM286415.1	EMBL	CDS	1093222	1093569	.	+	0	ID=cds925;Parent=gene971;Dbxref=EnsemblGenomes-Gn:YE0970,EnsemblGenomes-Tr:CAL11068,GOA:A1JKF6,InterPro:IPR003188,UniProtKB/TrEMBL:A1JKF6,NCBI_GP:CAL11068.1;Name=CAL11068.1;gbkey=CDS;gene=celC;product=PTS system%2C cellobiose-specific IIA component;protein_id=CAL11068.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1093273	1093560	.	+	.	ID=id1834;Note=Pfam match to entry PF02255 PTS_IIA%2C PTS system%2CLactose/Cellobiose specific IIA subunit%2C score 169.9%2CE-value 2.8e-48;gbkey=misc_feature;gene=celC;inference=protein motif:PFAM:PF02255
AM286415.1	EMBL	sequence_feature	1093441	1093464	.	+	.	ID=id1835;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=celC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1093621	1094451	.	+	.	ID=gene972;Name=celD;gbkey=Gene;gene=celD;gene_biotype=protein_coding;locus_tag=YE0971
AM286415.1	EMBL	CDS	1093621	1094451	.	+	0	ID=cds926;Parent=gene972;Dbxref=EnsemblGenomes-Gn:YE0971,EnsemblGenomes-Tr:CAL11069,GOA:A1JKF7,InterPro:IPR009057,InterPro:IPR011051,InterPro:IPR013096,InterPro:IPR014710,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR020449,UniProtKB/TrEMBL:A1JKF7,NCBI_GP:CAL11069.1;Name=CAL11069.1;gbkey=CDS;gene=celD;product=cel operon repressor;protein_id=CAL11069.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1094149	1094265	.	+	.	ID=id1836;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 1.7%2C E-value 1.8;gbkey=misc_feature;gene=celD;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	1094272	1094400	.	+	.	ID=id1837;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=celD;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	1094284	1094415	.	+	.	ID=id1838;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 37.4%2C E-value 2.1e-08;gbkey=misc_feature;gene=celD;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	1094500	1095261	.	+	.	ID=gene973;Name=YE0972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0972
AM286415.1	EMBL	CDS	1094500	1095261	.	+	0	ID=cds927;Parent=gene973;Dbxref=EnsemblGenomes-Gn:YE0972,EnsemblGenomes-Tr:CAL11070,GOA:A1JKF8,InterPro:IPR002509,InterPro:IPR006879,InterPro:IPR011330,InterPro:IPR022948,NCBI_GP:CAL11070.1;Name=CAL11070.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11070.1;transl_table=11
AM286415.1	EMBL	gene	1095323	1096774	.	-	.	ID=gene974;Name=YE0973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0973
AM286415.1	EMBL	CDS	1095323	1096774	.	-	0	ID=cds928;Parent=gene974;Dbxref=EnsemblGenomes-Gn:YE0973,EnsemblGenomes-Tr:CAL11071,GOA:A1JKF9,InterPro:IPR002645,InterPro:IPR011547,UniProtKB/TrEMBL:A1JKF9,NCBI_GP:CAL11071.1;Name=CAL11071.1;Note=Similar to many sulphate permeases including: Pseudomonas sp. R9 sulfate permease SWALL:Q9RBV5 (EMBL:AF157797) (495 aa) fasta scores: E(): 6.8e-74%2C46.13 38d in 466 aa and to Bacillus halodurans sulfate permease bh0414 SWALL:Q9KFR3 (EMBL:AP001508) (486 aa) fasta scores: E(): 1e-77%2C 46.46 38d in 467 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP001508;product=putative membrane transport protein;protein_id=CAL11071.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1095374	1095568	.	-	.	ID=id1839;Note=Pfam match to entry PF01740 STAS%2C STAS domain %2Cscore 19.2%2C E-value 1.3e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01740
AM286415.1	EMBL	sequence_feature	1095623	1096474	.	-	.	ID=id1840;Note=Pfam match to entry PF00916 Sulfate_transp%2C Sulfate transporter family%2C score 256.7%2C E-value 2e-74;gbkey=misc_feature;inference=protein motif:PFAM:PF00916
AM286415.1	EMBL	sequence_feature	1096664	1096732	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1096583	1096651	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1096457	1096525	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1096379	1096438	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1096301	1096369	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1096214	1096282	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1096067	1096135	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1095941	1096009	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1095839	1095898	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1095767	1095826	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1095656	1095724	.	-	.	ID=id1841;Note=11 probable transmembrane helices predicted for YE0973 by TMHMM2.0 at aa 15-37%2C 42-64%2C 84-106%2C 113-132%2C136-158%2C 165-187%2C 214-236%2C 256-278%2C 293-312%2C 317-336 and 351-373;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	pseudogene	1096884	1097051	.	-	.	ID=gene975;Name=YE0974;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE0974;pseudo=true
AM286415.1	EMBL	CDS	1096884	1097051	.	-	0	ID=cds929;Parent=gene975;Note=Similar to the N-terminus of many phage integrases e.g. Escherichia coli prophage cp4-57 integrase inta or slpa or intx or b2622 SWALL:INTA_ECOLI (SWALL:P32053) (413 aa) fasta scores: E(): 3.8e-09%2C 53.57 38d in 56 aa%2C and to Yersinia pestis putative prophage integrase ypo1098 SWALL:Q8ZH15 (EMBL:AJ414146) (399 aa) fasta scores: E(): 7.2e-18%2C 87.5 38d in 56 aa. This CDS appears to be a gene remnant;gbkey=CDS;inference=similar to sequence:UniProtKB:P32053;product=prophage integrase (partial);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1097155	1116114	.	-	.	ID=id1842;Note=Possible integrate plasmid;gbkey=misc_feature;standard_name=YGI-3
AM286415.1	EMBL	repeat_region	1097155	1097168	.	-	.	ID=id1843;Note=Direct repeat flanking possible genomic island%2C14mer;gbkey=repeat_region
AM286415.1	EMBL	gene	1097520	1098374	.	+	.	ID=gene976;Name=YE0975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0975
AM286415.1	EMBL	CDS	1097520	1098374	.	+	0	ID=cds930;Parent=gene976;Dbxref=EnsemblGenomes-Gn:YE0975,EnsemblGenomes-Tr:CAL11073,UniProtKB/TrEMBL:A1JKG0,NCBI_GP:CAL11073.1;Name=CAL11073.1;Note=Similar to Escherichia coli O157:H7 hypothetical protein Z3947 or Ecs3514 SWALL:Q8X967 (EMBL:AE005493) (283 aa) fasta scores: E(): 1.2e-65%2C 57.04 38d in 284 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005493;product=conserved hypothetical protein;protein_id=CAL11073.1;transl_table=11
AM286415.1	EMBL	gene	1098498	1098698	.	+	.	ID=gene977;Name=YE0975A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0975A
AM286415.1	EMBL	CDS	1098498	1098698	.	+	0	ID=cds931;Parent=gene977;Dbxref=EnsemblGenomes-Gn:YE0975A,EnsemblGenomes-Tr:CAL11074,InterPro:IPR010260,UniProtKB/TrEMBL:A1JKG1,NCBI_GP:CAL11074.1;Name=CAL11074.1;Note=Similar to many including: Escherichia coli O157:H7 putative DNA binding protein Z3946 or ecs3513 SWALL:Q8X969 (EMBL:AE005493) (68 aa) fasta scores: E(): 1.1e-17%2C 69.23 id in 65 aa%2C and to Yersinia pestis putative regulatory protein Ypo0878 SWALL:Q8ZHL3 (EMBL:AJ414145) (66 aa) fasta scores: E(): 3.7e-13%2C 54.68 38d in 64 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=conserved hypothetical protein;protein_id=CAL11074.1;transl_table=11
AM286415.1	EMBL	gene	1098715	1099029	.	+	.	ID=gene978;Name=YE0976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0976
AM286415.1	EMBL	CDS	1098715	1099029	.	+	0	ID=cds932;Parent=gene978;Dbxref=EnsemblGenomes-Gn:YE0976,EnsemblGenomes-Tr:CAL11075,UniProtKB/TrEMBL:A1JKG3,NCBI_GP:CAL11075.1;Name=CAL11075.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11075.1;transl_table=11
AM286415.1	EMBL	gene	1099313	1100518	.	+	.	ID=gene979;Name=YE0977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0977
AM286415.1	EMBL	CDS	1099313	1100518	.	+	0	ID=cds933;Parent=gene979;Dbxref=EnsemblGenomes-Gn:YE0977,EnsemblGenomes-Tr:CAL11076,GOA:A1JKG4,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB/TrEMBL:A1JKG4,NCBI_GP:CAL11076.1;Name=CAL11076.1;Note=Similar to Escherichia coli O157:H7 putative site specific recombinase Ecs3512 SWALL:Q8X3D8 (EMBL:AP002562) (401 aa) fasta scores: E(): 4.9e-48%2C 36.82 38d in 391 aa and to Staphylococcus aureus transposase A from transposon Tn554 SWALL:TNPA_STAAM (SWALL:P06696) (361 aa) fasta scores: E(): 4.6e-05%2C 24.65 38d in 365 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P06696;product=putative integrase/recombinase;protein_id=CAL11076.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1099832	1100470	.	+	.	ID=id1844;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 32.3%2C E-value 6.1e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	1100515	1101873	.	+	.	ID=gene980;Name=YE0978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0978
AM286415.1	EMBL	CDS	1100515	1101873	.	+	0	ID=cds934;Parent=gene980;Dbxref=EnsemblGenomes-Gn:YE0978,EnsemblGenomes-Tr:CAL11077,GOA:A1JKG5,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB/TrEMBL:A1JKG5,NCBI_GP:CAL11077.1;Name=CAL11077.1;Note=Similar to Escherichia coli O157:H7 hypothetical protein Z3943 or Ecs3511 SWALL:Q8X972 (EMBL:AE005493) (441 aa) fasta scores: E(): 9.1e-41%2C 32.73 38d in 443 aa and in the C-terminus to several putative integrases: Aquifex aeolicus probable integrase/recombinase Aa09 SWALL:YZ09_AQUAE (SWALL:O66403) (315 aa) fasta scores: E(): 9.3%2C 22.89 38d in 345 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:O66403;product=putative integrase/recombinase;protein_id=CAL11077.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1100989	1101666	.	+	.	ID=id1845;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score -23.4%2C E-value 0.0095;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	1101870	1103729	.	+	.	ID=gene981;Name=YE0979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0979
AM286415.1	EMBL	CDS	1101870	1103729	.	+	0	ID=cds935;Parent=gene981;Dbxref=EnsemblGenomes-Gn:YE0979,EnsemblGenomes-Tr:CAL11078,GOA:A1JKG6,UniProtKB/TrEMBL:A1JKG6,NCBI_GP:CAL11078.1;Name=CAL11078.1;Note=Similar to Escherichia coli O157:H7 hypothetical protein Z3942 SWALL:Q8X403 (EMBL:AE005493) (470 aa) fasta scores: E(): 2.2e-45%2C 36.66 38d in 510 aa and to Pasteurella multocida hypothetical protein Pm1947 SWALL:Q9CJP7 (EMBL:AE006231) (678 aa) fasta scores: E(): 6.2e-39%2C 26.62 38d in 631 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE006231;product=conserved DNA-binding protein;protein_id=CAL11078.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1103295	1103360	.	+	.	ID=id1846;Note=Predicted helix-turn-helix motif with score 985.000%2C SD 2.54 at aa 476-497%2C sequence LDIAKWSGRVSITQNRVYNHVS;gbkey=misc_feature
AM286415.1	EMBL	gene	1103765	1104169	.	+	.	ID=gene982;Name=YE0980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0980
AM286415.1	EMBL	CDS	1103765	1104169	.	+	0	ID=cds936;Parent=gene982;Dbxref=EnsemblGenomes-Gn:YE0980,EnsemblGenomes-Tr:CAL11079,UniProtKB/TrEMBL:A1JKG7,NCBI_GP:CAL11079.1;Name=CAL11079.1;Note=Similar to Escherichia coli O157:H7 hypothetical protein Ecs3509 SWALL:Q8X5G1 (EMBL:AP002562) (132 aa) fasta scores: E(): 2.8e-17%2C 46.56 38d in 131 aa and to Pasteurella multocida hypothetical protein Pm1946 SWALL:Q9CJP8 (EMBL:AE006231) (136 aa) fasta scores: E(): 5.1e-11%2C 35.77 38d in 123 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP002562;product=conserved hypothetical protein;protein_id=CAL11079.1;transl_table=11
AM286415.1	EMBL	gene	1104276	1104698	.	+	.	ID=gene983;Name=YE0981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0981
AM286415.1	EMBL	CDS	1104276	1104698	.	+	0	ID=cds937;Parent=gene983;Dbxref=EnsemblGenomes-Gn:YE0981,EnsemblGenomes-Tr:CAL11080,UniProtKB/TrEMBL:A1JKG8,NCBI_GP:CAL11080.1;Name=CAL11080.1;Note=Similar in parts to Escherichia coli O157:H7 hypothetical protein Z3940 or Ecs3508 SWALL:Q8X976 (EMBL:AE005493) (156 aa) fasta scores: E(): 0.012%2C 25.38 id in 130 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005493;product=hypothetical protein;protein_id=CAL11080.1;transl_table=11
AM286415.1	EMBL	gene	1104747	1105136	.	-	.	ID=gene984;Name=YE0982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0982
AM286415.1	EMBL	CDS	1104747	1105136	.	-	0	ID=cds938;Parent=gene984;Dbxref=EnsemblGenomes-Gn:YE0982,EnsemblGenomes-Tr:CAL11081,UniProtKB/TrEMBL:A1JKG9,NCBI_GP:CAL11081.1;Name=CAL11081.1;Note=Similar to Escherichia coli O157:H7 hypothetical protein Z3937 or Ecs3506 SWALL:Q8X978 (EMBL:AE005493) (131 aa) fasta scores: E(): 6.4e-13%2C 36.79 38d in 125 aa%2C and to Buchnera aphidicola small protein A homolog precursor SmpA or Bu186 SWALL:SMPA_BUCAI (SWALL:P57283) (102 aa) fasta scores: E(): 4%2C 30.58 38d in 85 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P57283;product=putative lipoprotein;protein_id=CAL11081.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1105080	1105112	.	-	.	ID=id1847;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1105166	1105807	.	-	.	ID=gene985;Name=YE0983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0983
AM286415.1	EMBL	CDS	1105166	1105807	.	-	0	ID=cds939;Parent=gene985;Dbxref=EnsemblGenomes-Gn:YE0983,EnsemblGenomes-Tr:CAL11082,UniProtKB/TrEMBL:A1JKH0,NCBI_GP:CAL11082.1;Name=CAL11082.1;Note=no significant database hits;gbkey=CDS;product=putative membrane protein;protein_id=CAL11082.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1105673	1105732	.	-	.	ID=id1848;Note=2 probable transmembrane helices predicted for YE0983 by TMHMM2.0 at aa 26-45 and 49-68;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1105604	1105663	.	-	.	ID=id1848;Note=2 probable transmembrane helices predicted for YE0983 by TMHMM2.0 at aa 26-45 and 49-68;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	1106028	1107299	.	-	.	ID=gene986;Name=YE0984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0984
AM286415.1	EMBL	CDS	1106028	1107299	.	-	0	ID=cds940;Parent=gene986;Dbxref=EnsemblGenomes-Gn:YE0984,EnsemblGenomes-Tr:CAL11083,InterPro:IPR005094,UniProtKB/TrEMBL:A1JKH1,NCBI_GP:CAL11083.1;Name=CAL11083.1;Note=Similar in the N-terminus to several proteins which carry out plasmid or transposon mobility-related functions including: Bacteroides fragilis mobilization protein BmgA SWALL:Q8RM71 (EMBL:AY053505) (308 aa) fasta scores: E(): 2.7e-05%2C 24.7 38d in 251 aa%2C Bacteroides thetaiotaomicron MobA protein SWALL:Q93L54 (EMBL:AJ311171) (303 aa) fasta scores: E(): 0.00018%2C 23.88 38d in 247 aa%2C and Shigella sonnei relaxase NikB SWALL:Q9R2J7 (EMBL:AB021078) (899 aa) fasta scores: E(): 0.53%2C 22.07 38d in 222 aa. This CDS also possesses a region containing 23xAP repeats which because of its low complexity has many spurious database hits.;gbkey=CDS;inference=similar to sequence:INSDC:AY053505;product=repetative plasmid-related protein;protein_id=CAL11083.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1106700	1107011	.	-	.	ID=id1849;Note=Pfam match to entry PF03432 Relaxase%2CRelaxase/Mobilization nuclease domain%2C score 14.0%2CE-value 0.00038;gbkey=misc_feature;inference=protein motif:PFAM:PF03432
AM286415.1	EMBL	repeat_region	1106385	1106522	.	-	.	ID=id1850;Note=contains 23xACGACC repeat;gbkey=repeat_region
AM286415.1	EMBL	gene	1107316	1107732	.	-	.	ID=gene987;Name=YE0986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0986
AM286415.1	EMBL	CDS	1107316	1107732	.	-	0	ID=cds941;Parent=gene987;Dbxref=EnsemblGenomes-Gn:YE0986,EnsemblGenomes-Tr:CAL11084,UniProtKB/TrEMBL:A1JKH2,NCBI_GP:CAL11084.1;Name=CAL11084.1;Note=Weakly similar in parts to Pasteurella multocida%2Cand Pasteurella haemolytica MbecY or MobC SWALL:Q51926 (EMBL:U57647) (101 aa) fasta scores: E(): 1.9%2C 30 38d in 100 aa;gbkey=CDS;inference=similar to sequence:INSDC:U57647;product=putative ATP/GTP-binding protein;protein_id=CAL11084.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1107664	1107687	.	-	.	ID=id1851;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1108214	1108765	.	-	.	ID=gene988;Name=YE0987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0987
AM286415.1	EMBL	CDS	1108214	1108765	.	-	0	ID=cds942;Parent=gene988;Dbxref=EnsemblGenomes-Gn:YE0987,EnsemblGenomes-Tr:CAL11085,UniProtKB/TrEMBL:A1JKH3,NCBI_GP:CAL11085.1;Name=CAL11085.1;Note=no significant database hits;gbkey=CDS;product=putative inner membrane protein;protein_id=CAL11085.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1108679	1108747	.	-	.	ID=id1852;Note=4 probable transmembrane helices predicted for YE0987 by TMHMM2.0 at aa 7-29%2C 33-52%2C 64-83 and 93-115;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1108610	1108669	.	-	.	ID=id1852;Note=4 probable transmembrane helices predicted for YE0987 by TMHMM2.0 at aa 7-29%2C 33-52%2C 64-83 and 93-115;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1108517	1108576	.	-	.	ID=id1852;Note=4 probable transmembrane helices predicted for YE0987 by TMHMM2.0 at aa 7-29%2C 33-52%2C 64-83 and 93-115;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1108421	1108489	.	-	.	ID=id1852;Note=4 probable transmembrane helices predicted for YE0987 by TMHMM2.0 at aa 7-29%2C 33-52%2C 64-83 and 93-115;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1108807	1110333	.	-	.	ID=gene989;Name=YE0988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0988
AM286415.1	EMBL	CDS	1108807	1110333	.	-	0	ID=cds943;Parent=gene989;Dbxref=EnsemblGenomes-Gn:YE0988,EnsemblGenomes-Tr:CAL11086,InterPro:IPR011202,UniProtKB/TrEMBL:A1JKH4,NCBI_GP:CAL11086.1;Name=CAL11086.1;Note=Similar to Bacillus anthracis str. A2012 hypothetical protein%2C Bxb0100 SWALL:AAM26251 (EMBL:AE011191) (541 aa) fasta scores: E(): 2.2e-22%2C28.14 38d in 533 aa and to Lactococcus phage BK5-T hypothetical 61.9 kDa protein SWALL:Q38324 (EMBL:AF176025) (536 aa) fasta scores: E(): 1.4e-16%2C 26.69 38d in 547 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF176025;product=conserved hypothetical protein;protein_id=CAL11086.1;transl_table=11
AM286415.1	EMBL	gene	1110505	1110981	.	+	.	ID=gene990;Name=YE0989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0989
AM286415.1	EMBL	CDS	1110505	1110981	.	+	0	ID=cds944;Parent=gene990;Dbxref=EnsemblGenomes-Gn:YE0989,EnsemblGenomes-Tr:CAL11087,UniProtKB/TrEMBL:A1JKH5,NCBI_GP:CAL11087.1;Name=CAL11087.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11087.1;transl_table=11
AM286415.1	EMBL	gene	1111058	1112893	.	-	.	ID=gene991;Name=YE0990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0990
AM286415.1	EMBL	CDS	1111058	1112893	.	-	0	ID=cds945;Parent=gene991;Dbxref=EnsemblGenomes-Gn:YE0990,EnsemblGenomes-Tr:CAL11088,InterPro:IPR022205,InterPro:IPR027417,UniProtKB/TrEMBL:A1JKH6,NCBI_GP:CAL11088.1;Name=CAL11088.1;Note=Similar to Agrobacterium tumefaciens hypothetical protein Yme%2C from the octopine-type Ti plasmid sequence SWALL:O52294 (EMBL:AF242881) (660 aa) fasta scores: E(): 3.4e-05%2C 22.96 38d in 662 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF242881;product=AYP/GTP-binding protein;protein_id=CAL11088.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1112765	1112788	.	-	.	ID=id1853;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1112875	1113297	.	-	.	ID=gene992;Name=YE0991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0991
AM286415.1	EMBL	CDS	1112875	1113297	.	-	0	ID=cds946;Parent=gene992;Dbxref=EnsemblGenomes-Gn:YE0991,EnsemblGenomes-Tr:CAL11089,UniProtKB/TrEMBL:A1JKH7,NCBI_GP:CAL11089.1;Name=CAL11089.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11089.1;transl_table=11
AM286415.1	EMBL	gene	1113318	1114508	.	-	.	ID=gene993;Name=YE0992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0992
AM286415.1	EMBL	CDS	1113318	1114508	.	-	0	ID=cds947;Parent=gene993;Dbxref=EnsemblGenomes-Gn:YE0992,EnsemblGenomes-Tr:CAL11090,UniProtKB/TrEMBL:A1JKH8,NCBI_GP:CAL11090.1;Name=CAL11090.1;Note=Similar to Vibrio cholerae hypothetical protein Vc0492 SWALL:Q9KUM3 (EMBL:AE004135) (388 aa) fasta scores: E(): 2e-07%2C 24.54 38d in 383 aa and to Agrobacterium tumefaciens Ymg%2C from the octopine-type Ti plasmid sequence SWALL:O52296 (EMBL:AF242881) (388 aa) fasta scores: E(): 0.00029%2C 20.1 38d in 383 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF242881;product=hypothetical protein;protein_id=CAL11090.1;transl_table=11
AM286415.1	EMBL	gene	1114774	1116003	.	-	.	ID=gene994;Name=YE0993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0993
AM286415.1	EMBL	CDS	1114774	1116003	.	-	0	ID=cds948;Parent=gene994;Dbxref=EnsemblGenomes-Gn:YE0993,EnsemblGenomes-Tr:CAL11091,GOA:A1JKH9,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR023109,InterPro:IPR025166,UniProtKB/TrEMBL:A1JKH9,NCBI_GP:CAL11091.1;Name=CAL11091.1;gbkey=CDS;product=putative prophage integrase;protein_id=CAL11091.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1114837	1115349	.	-	.	ID=id1854;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 72.4%2C E-value 6.2e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	repeat_region	1116101	1116114	.	-	.	ID=id1855;Note=Direct repeat flanking possible genomic island%2C14mer;gbkey=repeat_region
AM286415.1	EMBL	gene	1116169	1116549	.	-	.	ID=gene995;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=misc_RNA
AM286415.1	EMBL	transcript	1116169	1116549	.	-	.	ID=rna55;Parent=gene995;Note=tmRNA (10Sa RNA) (RF00023) as predicted by Rfam%2Cscore 169.21%2C positions 1 to 366;gbkey=misc_RNA;gene=ssrA
AM286415.1	EMBL	exon	1116169	1116549	.	-	.	ID=id1856;Parent=rna55;Note=tmRNA (10Sa RNA) (RF00023) as predicted by Rfam%2Cscore 169.21%2C positions 1 to 366;gbkey=misc_RNA;gene=ssrA
AM286415.1	EMBL	gene	1116598	1117080	.	-	.	ID=gene996;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;gene_synonym=b2620,smqB;locus_tag=YE0994
AM286415.1	EMBL	CDS	1116598	1117080	.	-	0	ID=cds949;Parent=gene996;Dbxref=EnsemblGenomes-Gn:YE0994,EnsemblGenomes-Tr:CAL11092,GOA:A1JKI0,InterPro:IPR000037,InterPro:IPR020081,InterPro:IPR023620,NCBI_GP:CAL11092.1;Name=CAL11092.1;gbkey=CDS;gene=smpB;product=SsrA-binding protein (small protein B);protein_id=CAL11092.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1116841	1117047	.	-	.	ID=id1857;Note=Pfam match to entry PF01668 SmpB%2C SmpB protein %2Cscore 158.0%2C E-value 1.1e-44;gbkey=misc_feature;gene=smpB;inference=protein motif:PFAM:PF01668
AM286415.1	EMBL	sequence_feature	1116949	1116987	.	-	.	ID=id1858;Note=PS01317 Protein smpB signature.;gbkey=misc_feature;gene=smpB;inference=protein motif:Prosite:PS01317
AM286415.1	EMBL	gene	1117241	1117675	.	+	.	ID=gene997;Name=YE0995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0995
AM286415.1	EMBL	CDS	1117241	1117675	.	+	0	ID=cds950;Parent=gene997;Dbxref=EnsemblGenomes-Gn:YE0995,EnsemblGenomes-Tr:CAL11093,InterPro:IPR005031,InterPro:IPR023393,UniProtKB/TrEMBL:A1JKI1,NCBI_GP:CAL11093.1;Name=CAL11093.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11093.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1117241	1117669	.	+	.	ID=id1859;Note=Pfam match to entry PF03654 UPF0083%2CUncharacterised protein family (UPF0083)%2C score 330.8%2CE-value 1e-96;gbkey=misc_feature;inference=protein motif:PFAM:PF03654
AM286415.1	EMBL	gene	1117719	1117952	.	+	.	ID=gene998;Name=YE0996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0996
AM286415.1	EMBL	CDS	1117719	1117952	.	+	0	ID=cds951;Parent=gene998;Dbxref=EnsemblGenomes-Gn:YE0996,EnsemblGenomes-Tr:CAL11094,InterPro:IPR005346,InterPro:IPR016155,UniProtKB/TrEMBL:A1JKI2,NCBI_GP:CAL11094.1;Name=CAL11094.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11094.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1117719	1117928	.	+	.	ID=id1860;Note=Pfam match to entry PF03658 UPF0125%2CUncharacterised protein family (UPF0125)%2C score 121.5%2CE-value 1e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF03658
AM286415.1	EMBL	gene	1118105	1118455	.	-	.	ID=gene999;Name=YE0997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0997
AM286415.1	EMBL	CDS	1118105	1118455	.	-	0	ID=cds952;Parent=gene999;Dbxref=EnsemblGenomes-Gn:YE0997,EnsemblGenomes-Tr:CAL11095,GOA:A1JKI3,InterPro:IPR007450,InterPro:IPR026592,UniProtKB/TrEMBL:A1JKI3,NCBI_GP:CAL11095.1;Name=CAL11095.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11095.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1118387	1118419	.	-	.	ID=id1861;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1118560	1120239	.	-	.	ID=gene1000;Name=YE0998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0998
AM286415.1	EMBL	CDS	1118560	1120239	.	-	0	ID=cds953;Parent=gene1000;Dbxref=EnsemblGenomes-Gn:YE0998,EnsemblGenomes-Tr:CAL11096,GOA:A1JKI4,InterPro:IPR003395,InterPro:IPR004604,InterPro:IPR027417,UniProtKB/TrEMBL:A1JKI4,NCBI_GP:CAL11096.1;Name=CAL11096.1;gbkey=CDS;product=DNA repair protein RecN;protein_id=CAL11096.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1119397	1120224	.	-	.	ID=id1862;Note=Pfam match to entry PF02463 SMC_N%2C RecF/RecN/SMC N terminal domain%2C score -19.2%2C E-value 3.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF02463
AM286415.1	EMBL	sequence_feature	1120114	1120137	.	-	.	ID=id1863;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1120308	1121189	.	-	.	ID=gene1001;Name=YE0999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE0999
AM286415.1	EMBL	CDS	1120308	1121189	.	-	0	ID=cds954;Parent=gene1001;Dbxref=EnsemblGenomes-Gn:YE0999,EnsemblGenomes-Tr:CAL11097,GOA:A1JKI5,InterPro:IPR002504,InterPro:IPR016064,InterPro:IPR017437,InterPro:IPR017438,UniProtKB/TrEMBL:A1JKI5,NCBI_GP:CAL11097.1;Name=CAL11097.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11097.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1120347	1121090	.	-	.	ID=id1864;Note=Pfam match to entry PF01513 NAD_kinase%2C ATP-NAD kinase%2C score 388.0%2C E-value 6e-114;gbkey=misc_feature;inference=protein motif:PFAM:PF01513
AM286415.1	EMBL	gene	1121313	1121891	.	+	.	ID=gene1002;Name=YE1000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1000
AM286415.1	EMBL	CDS	1121313	1121891	.	+	0	ID=cds955;Parent=gene1002;Dbxref=EnsemblGenomes-Gn:YE1000,EnsemblGenomes-Tr:CAL11098,GOA:A1JKI6,InterPro:IPR000740,InterPro:IPR009012,InterPro:IPR013805,NCBI_GP:CAL11098.1;Name=CAL11098.1;gbkey=CDS;product=heat shock protein GrpE;protein_id=CAL11098.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1121379	1121879	.	+	.	ID=id1865;Note=Pfam match to entry PF01025 GrpE%2C GrpE%2C score 239.3%2C E-value 3.7e-69;gbkey=misc_feature;inference=protein motif:PFAM:PF01025
AM286415.1	EMBL	sequence_feature	1121742	1121873	.	+	.	ID=id1866;Note=PS01071 grpE protein signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01071
AM286415.1	EMBL	repeat_region	1121931	1122648	.	+	.	ID=id1867;Note=IS1541;gbkey=repeat_region
AM286415.1	EMBL	gene	1122080	1122538	.	+	.	ID=gene1003;Name=tnp;gbkey=Gene;gene=tnp;gene_biotype=protein_coding;locus_tag=YE1001
AM286415.1	EMBL	CDS	1122080	1122538	.	+	0	ID=cds956;Parent=gene1003;Dbxref=EnsemblGenomes-Gn:YE1001,EnsemblGenomes-Tr:CAL11099,GOA:A1JKI7,InterPro:IPR002686,UniProtKB/TrEMBL:A1JKI7,NCBI_GP:CAL11099.1;Name=CAL11099.1;Note=Previously sequenced as Yersinia enterocolitica IS1541 element transposase Tnp SWALL:Q9X9G7 (EMBL:AJ238016) (152 aa) fasta scores: E(): 1.2e-66%2C 100 id in 152 aa. Also similar to many other IS200-like transposases e.g. Salmonella typhimurium%2C and Salmonella typhi transposase for insertion sequence element IS200 SWALL:T200_SALTY (SWALL:Q57334) (152 aa) fasta scores: E(): 9.6e-64%2C 94.73 38d in 152 aa;gbkey=CDS;gene=tnp;inference=similar to sequence:UniProtKB:Q57334;product=transposase for IS1541;protein_id=CAL11099.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1122134	1122445	.	+	.	ID=id1868;Note=Pfam match to entry PF01797 Transposase_17%2CTransposase IS200 like%2C score 239.5%2C E-value 3.1e-69;gbkey=misc_feature;gene=tnp;inference=protein motif:PFAM:PF01797
AM286415.1	EMBL	gene	1122673	1123359	.	-	.	ID=gene1004;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=YE1002
AM286415.1	EMBL	CDS	1122673	1123359	.	-	0	ID=cds957;Parent=gene1004;Dbxref=EnsemblGenomes-Gn:YE1002,EnsemblGenomes-Tr:CAL11100,GOA:A1JKI8,InterPro:IPR002043,InterPro:IPR005122,InterPro:IPR018085,NCBI_GP:CAL11100.1;Name=CAL11100.1;gbkey=CDS;gene=ung;product=putative uracil-DNA glycosylase;protein_id=CAL11100.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1122727	1123215	.	-	.	ID=id1869;Note=Pfam match to entry PF03167 UDG%2C Uracil DNA glycosylase superfamily%2C score 293.3%2C E-value 1.9e-85;gbkey=misc_feature;gene=ung;inference=protein motif:PFAM:PF03167
AM286415.1	EMBL	sequence_feature	1123162	1123191	.	-	.	ID=id1870;Note=PS00130 Uracil-DNA glycosylase signature.;gbkey=misc_feature;gene=ung;inference=protein motif:Prosite:PS00130
AM286415.1	EMBL	sequence_feature	1123252	1123275	.	-	.	ID=id1871;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ung;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1123711	1124094	.	+	.	ID=gene1005;Name=YE1003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1003
AM286415.1	EMBL	CDS	1123711	1124094	.	+	0	ID=cds958;Parent=gene1005;Dbxref=EnsemblGenomes-Gn:YE1003,EnsemblGenomes-Tr:CAL11101,GOA:A1JKI9,InterPro:IPR001150,InterPro:IPR011140,InterPro:IPR019777,NCBI_GP:CAL11101.1;Name=CAL11101.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11101.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1123717	1124037	.	+	.	ID=id1872;Note=Pfam match to entry PF01228 Gly_radical%2C Glycine radical%2C score 164.1%2C E-value 1.5e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF01228
AM286415.1	EMBL	sequence_feature	1123999	1124025	.	+	.	ID=id1873;Note=PS00850 Glycine radical signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00850
AM286415.1	EMBL	gene	1124180	1124305	.	-	.	ID=gene1006;Name=YE1004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1004
AM286415.1	EMBL	CDS	1124180	1124305	.	-	0	ID=cds959;Parent=gene1006;Dbxref=EnsemblGenomes-Gn:YE1004,EnsemblGenomes-Tr:CAL11102,UniProtKB/TrEMBL:A1JKJ0,NCBI_GP:CAL11102.1;Name=CAL11102.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11102.1;transl_table=11
AM286415.1	EMBL	gene	1124315	1125289	.	+	.	ID=gene1007;Name=yplA;gbkey=Gene;gene=yplA;gene_biotype=protein_coding;locus_tag=YE1005
AM286415.1	EMBL	CDS	1124315	1125289	.	+	0	ID=cds960;Parent=gene1007;Dbxref=EnsemblGenomes-Gn:YE1005,EnsemblGenomes-Tr:CAL11103,InterPro:IPR024499,InterPro:IPR029058,UniProtKB/TrEMBL:A1JKJ1,NCBI_GP:CAL11103.1;Name=CAL11103.1;Note=Previously sequenced as: Yersinia enterocolitica phospholipase A YplA SWALL:O85477 (EMBL:AF067849) (324 aa) fasta scores: E(): 9.3e-114%2C 100 38d in 324 aa. Also highly similar to Yersinia pestis phospholipase A YplA or Ypo2706 SWALL:Q8ZD83 (EMBL:AJ414153) (320 aa) fasta scores: E(): 9.1e-75%2C 69.01 38d in 326 aa;gbkey=CDS;gene=yplA;inference=similar to sequence:INSDC:AJ414153;product=phospholipase A;protein_id=CAL11103.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1124894	1124923	.	+	.	ID=id1874;Note=PS00120 Lipases%2C serine active site.;gbkey=misc_feature;gene=yplA;inference=protein motif:Prosite:PS00120
AM286415.1	EMBL	gene	1125378	1126034	.	+	.	ID=gene1008;Name=yplB;gbkey=Gene;gene=yplB;gene_biotype=protein_coding;locus_tag=YE1006
AM286415.1	EMBL	CDS	1125378	1126034	.	+	0	ID=cds961;Parent=gene1008;Dbxref=EnsemblGenomes-Gn:YE1006,EnsemblGenomes-Tr:CAL11104,InterPro:IPR002110,InterPro:IPR020683,UniProtKB/TrEMBL:A1JKJ2,NCBI_GP:CAL11104.1;Name=CAL11104.1;gbkey=CDS;gene=yplB;product=putative phospholipase A accessory protein;protein_id=CAL11104.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1125504	1125602	.	+	.	ID=id1875;Note=Pfam match to entry PF00023 ank%2C Ankyrin repeat %2Cscore 0.8%2C E-value 15;gbkey=misc_feature;gene=yplB;inference=protein motif:PFAM:PF00023
AM286415.1	EMBL	sequence_feature	1125603	1125701	.	+	.	ID=id1876;Note=Pfam match to entry PF00023 ank%2C Ankyrin repeat %2Cscore 16.8%2C E-value 0.034;gbkey=misc_feature;gene=yplB;inference=protein motif:PFAM:PF00023
AM286415.1	EMBL	sequence_feature	1125705	1125803	.	+	.	ID=id1877;Note=Pfam match to entry PF00023 ank%2C Ankyrin repeat %2Cscore 11.4%2C E-value 0.66;gbkey=misc_feature;gene=yplB;inference=protein motif:PFAM:PF00023
AM286415.1	EMBL	sequence_feature	1125804	1125902	.	+	.	ID=id1878;Note=Pfam match to entry PF00023 ank%2C Ankyrin repeat %2Cscore 33.6%2C E-value 2.9e-07;gbkey=misc_feature;gene=yplB;inference=protein motif:PFAM:PF00023
AM286415.1	EMBL	gene	1126359	1127684	.	-	.	ID=gene1009;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;gene_synonym=rbaB;locus_tag=YE1007
AM286415.1	EMBL	CDS	1126359	1127684	.	-	0	ID=cds962;Parent=gene1009;Dbxref=EnsemblGenomes-Gn:YE1007,EnsemblGenomes-Tr:CAL11105,GOA:A1JKJ3,InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR027417,InterPro:IPR028621,UniProtKB/TrEMBL:A1JKJ3,NCBI_GP:CAL11105.1;Name=CAL11105.1;gbkey=CDS;gene=srmB;product=ATP-dependent RNA helicase;protein_id=CAL11105.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1126656	1126871	.	-	.	ID=id1879;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 103.3%2C E-value 3e-28;gbkey=misc_feature;gene=srmB;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	1127010	1127636	.	-	.	ID=id1880;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 272.4%2C E-value 3.8e-79;gbkey=misc_feature;gene=srmB;inference=protein motif:PFAM:PF00270
AM286415.1	EMBL	sequence_feature	1127196	1127222	.	-	.	ID=id1881;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;gbkey=misc_feature;gene=srmB;inference=protein motif:Prosite:PS00039
AM286415.1	EMBL	sequence_feature	1127520	1127543	.	-	.	ID=id1882;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=srmB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1127808	1128563	.	+	.	ID=gene1010;Name=YE1008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1008
AM286415.1	EMBL	CDS	1127808	1128563	.	+	0	ID=cds963;Parent=gene1010;Dbxref=EnsemblGenomes-Gn:YE1008,EnsemblGenomes-Tr:CAL11106,GOA:A1JKJ4,InterPro:IPR002052,InterPro:IPR002296,InterPro:IPR022882,InterPro:IPR029063,NCBI_GP:CAL11106.1;Name=CAL11106.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11106.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1128180	1128200	.	+	.	ID=id1883;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	1128691	1130328	.	-	.	ID=gene1011;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;gene_synonym=nicB;locus_tag=YE1009
AM286415.1	EMBL	CDS	1128691	1130328	.	-	0	ID=cds964;Parent=gene1011;Dbxref=EnsemblGenomes-Gn:YE1009,EnsemblGenomes-Tr:CAL11107,GOA:A1JKJ5,InterPro:IPR003953,InterPro:IPR005288,InterPro:IPR013027,InterPro:IPR015939,InterPro:IPR027477,UniProtKB/TrEMBL:A1JKJ5,NCBI_GP:CAL11107.1;Name=CAL11107.1;gbkey=CDS;gene=nadB;product=L-aspartate oxidase;protein_id=CAL11107.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1128697	1128972	.	-	.	ID=id1884;Note=Pfam match to entry PF02910 succ_DH_flav_C%2CFumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain%2C score 43.9%2C E-value 5.5e-12;gbkey=misc_feature;gene=nadB;inference=protein motif:PFAM:PF02910
AM286415.1	EMBL	sequence_feature	1129027	1129965	.	-	.	ID=id1885;Note=Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain%2C score 525.1%2C E-value 3.2e-155;gbkey=misc_feature;gene=nadB;inference=protein motif:PFAM:PF00890
AM286415.1	EMBL	sequence_feature	1129069	1129095	.	-	.	ID=id1886;Note=PS00037 Myb DNA-binding domain repeat signature 1.;gbkey=misc_feature;gene=nadB;inference=protein motif:Prosite:PS00037
AM286415.1	EMBL	gene	1130517	1131092	.	+	.	ID=gene1012;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;gene_synonym=sigE;locus_tag=YE1010
AM286415.1	EMBL	CDS	1130517	1131092	.	+	0	ID=cds965;Parent=gene1012;Dbxref=EnsemblGenomes-Gn:YE1010,EnsemblGenomes-Tr:CAL11108,GOA:A1JKJ6,InterPro:IPR000838,InterPro:IPR007627,InterPro:IPR011991,InterPro:IPR013249,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,InterPro:IPR014286,UniProtKB/TrEMBL:A1JKJ6,NCBI_GP:CAL11108.1;Name=CAL11108.1;gbkey=CDS;gene=rpoE;product=RNA polymerase sigma E factor;protein_id=CAL11108.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1130652	1130747	.	+	.	ID=id1887;Note=PS01063 Sigma-70 factors ECF subfamily signature.;gbkey=misc_feature;gene=rpoE;inference=protein motif:Prosite:PS01063
AM286415.1	EMBL	sequence_feature	1130976	1131041	.	+	.	ID=id1888;Note=Predicted helix-turn-helix motif with score 1031.000%2C SD 2.70 at aa 154-175%2C sequence LSYEEIAVIMDCPVGTVRSRIF;gbkey=misc_feature;gene=rpoE
AM286415.1	EMBL	gene	1131117	1131773	.	+	.	ID=gene1013;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;gene_synonym=mclA;locus_tag=YE1011
AM286415.1	EMBL	CDS	1131117	1131773	.	+	0	ID=cds966;Parent=gene1013;Dbxref=EnsemblGenomes-Gn:YE1011,EnsemblGenomes-Tr:CAL11109,GOA:A1JKJ7,InterPro:IPR005572,InterPro:IPR005573,InterPro:IPR026279,UniProtKB/TrEMBL:A1JKJ7,NCBI_GP:CAL11109.1;Name=CAL11109.1;gbkey=CDS;gene=rseA;product=sigma E factor negative regulatory protein;protein_id=CAL11109.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1131117	1131383	.	+	.	ID=id1889;Note=Pfam match to entry PF03872 RseA_N%2C Anti sigma-E protein RseA%2C N-terminal domain%2C score 146.6%2C E-value 2.8e-41;gbkey=misc_feature;gene=rseA;inference=protein motif:PFAM:PF03872
AM286415.1	EMBL	sequence_feature	1131411	1131443	.	+	.	ID=id1890;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=rseA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1131507	1131713	.	+	.	ID=id1891;Note=Pfam match to entry PF03873 RseA_C%2C Anti sigma-E protein RseA%2C C-terminal domain%2C score 44.1%2C E-value 2e-10;gbkey=misc_feature;gene=rseA;inference=protein motif:PFAM:PF03873
AM286415.1	EMBL	gene	1131773	1132729	.	+	.	ID=gene1014;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=YE1012
AM286415.1	EMBL	CDS	1131773	1132729	.	+	0	ID=cds967;Parent=gene1014;Dbxref=EnsemblGenomes-Gn:YE1012,EnsemblGenomes-Tr:CAL11110,InterPro:IPR005588,UniProtKB/TrEMBL:A1JKJ8,NCBI_GP:CAL11110.1;Name=CAL11110.1;gbkey=CDS;gene=rseB;product=sigma E factor regulatory protein;protein_id=CAL11110.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1131773	1132726	.	+	.	ID=id1892;Note=Pfam match to entry PF03888 MucB_RseB%2C MucB/RseB family%2C score 521.3%2C E-value 4.6e-154;gbkey=misc_feature;gene=rseB;inference=protein motif:PFAM:PF03888
AM286415.1	EMBL	gene	1132726	1133187	.	+	.	ID=gene1015;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=YE1013
AM286415.1	EMBL	CDS	1132726	1133187	.	+	0	ID=cds968;Parent=gene1015;Dbxref=EnsemblGenomes-Gn:YE1013,EnsemblGenomes-Tr:CAL11111,InterPro:IPR007359,InterPro:IPR026268,UniProtKB/TrEMBL:A1JKJ9,NCBI_GP:CAL11111.1;Name=CAL11111.1;gbkey=CDS;gene=rseC;product=sigma E factor regulatory protein;protein_id=CAL11111.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1132957	1133025	.	+	.	ID=id1893;Note=2 probable transmembrane helices predicted for YE1013 by TMHMM2.0 at aa 78-100 and 104-126;gbkey=misc_feature;gene=rseC;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1133035	1133103	.	+	.	ID=id1893;Note=2 probable transmembrane helices predicted for YE1013 by TMHMM2.0 at aa 78-100 and 104-126;gbkey=misc_feature;gene=rseC;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	1133202	1134038	.	-	.	ID=gene1016;Name=YE1014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1014
AM286415.1	EMBL	CDS	1133202	1134038	.	-	0	ID=cds969;Parent=gene1016;Dbxref=EnsemblGenomes-Gn:YE1014,EnsemblGenomes-Tr:CAL11112,UniProtKB/TrEMBL:A1JKK0,NCBI_GP:CAL11112.1;Name=CAL11112.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11112.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1133913	1133981	.	-	.	ID=id1894;Note=2 probable transmembrane helices predicted for YE1014 by TMHMM2.0 at aa 20-42 and 47-69;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1133832	1133900	.	-	.	ID=id1894;Note=2 probable transmembrane helices predicted for YE1014 by TMHMM2.0 at aa 20-42 and 47-69;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	1134410	1136209	.	+	.	ID=gene1017;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=YE1015
AM286415.1	EMBL	CDS	1134410	1136209	.	+	0	ID=cds970;Parent=gene1017;Dbxref=EnsemblGenomes-Gn:YE1015,EnsemblGenomes-Tr:CAL11113,GOA:A1JKK1,InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR005225,InterPro:IPR006297,InterPro:IPR009022,InterPro:IPR013842,InterPro:IPR027417,NCBI_GP:CAL11113.1;Name=CAL11113.1;gbkey=CDS;gene=lepA;product=putative GTP-binding elongation factor;protein_id=CAL11113.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1134413	1134961	.	+	.	ID=id1895;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu GTP binding domain%2C score 256.7%2C E-value 2.1e-74;gbkey=misc_feature;gene=lepA;inference=protein motif:PFAM:PF00009
AM286415.1	EMBL	sequence_feature	1134440	1134463	.	+	.	ID=id1896;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=lepA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1134533	1134580	.	+	.	ID=id1897;Note=PS00301 GTP-binding elongation factors signature.;gbkey=misc_feature;gene=lepA;inference=protein motif:Prosite:PS00301
AM286415.1	EMBL	sequence_feature	1134986	1135234	.	+	.	ID=id1898;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 55.3%2C E-value 8.7e-14;gbkey=misc_feature;gene=lepA;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	sequence_feature	1135601	1135867	.	+	.	ID=id1899;Note=Pfam match to entry PF00679 EFG_C%2C Elongation factor G C-terminus%2C score 118.5%2C E-value 8.2e-33;gbkey=misc_feature;gene=lepA;inference=protein motif:PFAM:PF00679
AM286415.1	EMBL	gene	1136219	1137217	.	+	.	ID=gene1018;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=YE1016
AM286415.1	EMBL	CDS	1136219	1137217	.	+	0	ID=cds971;Parent=gene1018;Dbxref=EnsemblGenomes-Gn:YE1016,EnsemblGenomes-Tr:CAL11114,GOA:A1JKK2,InterPro:IPR000223,InterPro:IPR015927,InterPro:IPR019533,InterPro:IPR019756,InterPro:IPR019757,InterPro:IPR019758,InterPro:IPR019759,InterPro:IPR019766,InterPro:IPR028360,UniProtKB/TrEMBL:A1JKK2,NCBI_GP:CAL11114.1;Name=CAL11114.1;gbkey=CDS;gene=lepB;product=signal peptidase I;protein_id=CAL11114.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1136231	1136284	.	+	.	ID=id1900;Note=2 probable transmembrane helices predicted for YE1016 by TMHMM2.0 at aa 5-22 and 67-89;gbkey=misc_feature;gene=lepB;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1136417	1136485	.	+	.	ID=id1900;Note=2 probable transmembrane helices predicted for YE1016 by TMHMM2.0 at aa 5-22 and 67-89;gbkey=misc_feature;gene=lepB;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	1136351	1137127	.	+	.	ID=id1901;Note=Pfam match to entry PF00461 Peptidase_S26%2C Signal peptidase I%2C score 291.3%2C E-value 7.7e-85;gbkey=misc_feature;gene=lepB;inference=protein motif:PFAM:PF00461
AM286415.1	EMBL	sequence_feature	1136504	1136527	.	+	.	ID=id1902;Note=PS00501 Signal peptidases I serine active site.;gbkey=misc_feature;gene=lepB;inference=protein motif:Prosite:PS00501
AM286415.1	EMBL	sequence_feature	1136675	1136713	.	+	.	ID=id1903;Note=PS00760 Signal peptidases I lysine active site.;gbkey=misc_feature;gene=lepB;inference=protein motif:Prosite:PS00760
AM286415.1	EMBL	sequence_feature	1136738	1136770	.	+	.	ID=id1904;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=lepB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1137047	1137088	.	+	.	ID=id1905;Note=PS00761 Signal peptidases I signature 3.;gbkey=misc_feature;gene=lepB;inference=protein motif:Prosite:PS00761
AM286415.1	EMBL	gene	1137463	1138143	.	+	.	ID=gene1019;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=YE1017
AM286415.1	EMBL	CDS	1137463	1138143	.	+	0	ID=cds972;Parent=gene1019;Dbxref=EnsemblGenomes-Gn:YE1017,EnsemblGenomes-Tr:CAL11115,GOA:A1JKK3,InterPro:IPR000999,InterPro:IPR011907,InterPro:IPR014720,NCBI_GP:CAL11115.1;Name=CAL11115.1;gbkey=CDS;gene=rnc;product=ribonuclease III;protein_id=CAL11115.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1137574	1137846	.	+	.	ID=id1906;Note=Pfam match to entry PF00636 Ribonuclease_3%2C RNase3 domain%2C score 168.4%2C E-value 7.7e-48;gbkey=misc_feature;gene=rnc;inference=protein motif:PFAM:PF00636
AM286415.1	EMBL	sequence_feature	1137574	1137600	.	+	.	ID=id1907;Note=PS00517 Ribonuclease III family signature.;gbkey=misc_feature;gene=rnc;inference=protein motif:Prosite:PS00517
AM286415.1	EMBL	sequence_feature	1137928	1138131	.	+	.	ID=id1908;Note=Pfam match to entry PF00035 dsrm%2C Double-stranded RNA binding motif%2C score 90.5%2C E-value 2.3e-24;gbkey=misc_feature;gene=rnc;inference=protein motif:PFAM:PF00035
AM286415.1	EMBL	gene	1138140	1139051	.	+	.	ID=gene1020;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;gene_synonym=rbaA;locus_tag=YE1018
AM286415.1	EMBL	CDS	1138140	1139051	.	+	0	ID=cds973;Parent=gene1020;Dbxref=EnsemblGenomes-Gn:YE1018,EnsemblGenomes-Tr:CAL11116,GOA:A1JKK4,InterPro:IPR004044,InterPro:IPR005225,InterPro:IPR005662,InterPro:IPR006073,InterPro:IPR009019,InterPro:IPR015946,InterPro:IPR027417,NCBI_GP:CAL11116.1;Name=CAL11116.1;gbkey=CDS;gene=era;product=putative GTP-binding protein;protein_id=CAL11116.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1138185	1138208	.	+	.	ID=id1909;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=era;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1139061	1139786	.	+	.	ID=gene1021;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=YE1019
AM286415.1	EMBL	CDS	1139061	1139786	.	+	0	ID=cds974;Parent=gene1021;Dbxref=EnsemblGenomes-Gn:YE1019,EnsemblGenomes-Tr:CAL11117,GOA:A1JKK5,InterPro:IPR003717,InterPro:IPR012340,InterPro:IPR022572,NCBI_GP:CAL11117.1;Name=CAL11117.1;gbkey=CDS;gene=recO;product=DNA repair protein;protein_id=CAL11117.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1139061	1139762	.	+	.	ID=id1910;Note=Pfam match to entry PF02565 RecO%2C Recombination protein O%2C score 305.7%2C E-value 3.7e-89;gbkey=misc_feature;gene=recO;inference=protein motif:PFAM:PF02565
AM286415.1	EMBL	sequence_feature	1139295	1139312	.	+	.	ID=id1911;Note=PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide.;gbkey=misc_feature;gene=recO;inference=protein motif:Prosite:PS00343
AM286415.1	EMBL	gene	1139955	1140686	.	+	.	ID=gene1022;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=YE1020
AM286415.1	EMBL	CDS	1139955	1140686	.	+	0	ID=cds975;Parent=gene1022;Dbxref=EnsemblGenomes-Gn:YE1020,EnsemblGenomes-Tr:CAL11118,GOA:A1JKK6,InterPro:IPR004569,InterPro:IPR013785,UniProtKB/TrEMBL:A1JKK6,NCBI_GP:CAL11118.1;Name=CAL11118.1;gbkey=CDS;gene=pdxJ;product=pyridoxal phosphate biosynthetic protein PdxJ;protein_id=CAL11118.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1139964	1140674	.	+	.	ID=id1912;Note=Pfam match to entry PF03740 PdxJ%2C Pyridoxal phosphate biosynthesis protein PdxJ%2C score 478.2%2C E-value 4.4e-141;gbkey=misc_feature;gene=pdxJ;inference=protein motif:PFAM:PF03740
AM286415.1	EMBL	gene	1140686	1141066	.	+	.	ID=gene1023;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;gene_synonym=dpj;locus_tag=YE1021
AM286415.1	EMBL	CDS	1140686	1141066	.	+	0	ID=cds976;Parent=gene1023;Dbxref=EnsemblGenomes-Gn:YE1021,EnsemblGenomes-Tr:CAL11119,GOA:A1JKK7,InterPro:IPR002582,InterPro:IPR004568,InterPro:IPR008278,NCBI_GP:CAL11119.1;Name=CAL11119.1;gbkey=CDS;gene=acpS;product=holo-[acyl-carrier protein] synthase;protein_id=CAL11119.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1140698	1141048	.	+	.	ID=id1913;Note=Pfam match to entry PF01648 ACPS%2C4'-phosphopantetheinyl transferase superfamily%2C score 158.9%2C E-value 5.5e-45;gbkey=misc_feature;gene=acpS;inference=protein motif:PFAM:PF01648
AM286415.1	EMBL	gene	1141105	1141263	.	+	.	ID=gene1024;Name=YE1022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1022
AM286415.1	EMBL	CDS	1141105	1141263	.	+	0	ID=cds977;Parent=gene1024;Dbxref=EnsemblGenomes-Gn:YE1022,EnsemblGenomes-Tr:CAL11120,UniProtKB/TrEMBL:A1JKK8,NCBI_GP:CAL11120.1;Name=CAL11120.1;Note=Similar to Yersinia pestis hypothetical protein Ypo2189 SWALL:Q8ZEI1 (EMBL:AJ414151) (82 aa) fasta scores: E(): 1.3e-05%2C 56.86 38d in 51 aa and Yersinia pestis putative membrane protein Ypo2495 SWALL:Q8ZDR1 (EMBL:AJ414152) (60 aa) fasta scores: E(): 0.00017%2C 57.77 id in 45 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414152;product=conserved hypothetical protein;protein_id=CAL11120.1;transl_table=11
AM286415.1	EMBL	gene	1141652	1142995	.	+	.	ID=gene1025;Name=gntP;gbkey=Gene;gene=gntP;gene_biotype=protein_coding;locus_tag=YE1023
AM286415.1	EMBL	CDS	1141652	1142995	.	+	0	ID=cds978;Parent=gene1025;Dbxref=EnsemblGenomes-Gn:YE1023,EnsemblGenomes-Tr:CAL11121,GOA:A1JKK9,InterPro:IPR003474,UniProtKB/TrEMBL:A1JKK9,NCBI_GP:CAL11121.1;Name=CAL11121.1;gbkey=CDS;gene=gntP;product=putative gluconate transporter;protein_id=CAL11121.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1141661	1142989	.	+	.	ID=id1914;Note=Pfam match to entry PF02447 GntP_permease%2C GntP family permease%2C score 774.2%2C E-value 3.4e-230;gbkey=misc_feature;gene=gntP;inference=protein motif:PFAM:PF02447
AM286415.1	EMBL	sequence_feature	1141661	1141714	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1141733	1141792	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1141820	1141888	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1141946	1142050	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1142171	1142239	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1142330	1142398	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1142426	1142494	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1142555	1142623	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1142633	1142701	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1142720	1142788	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1142921	1142989	.	+	.	ID=id1915;Note=11 probable transmembrane helices predicted for YE1023 by TMHMM2.0 at aa 4-21%2C 28-47%2C 57-79%2C 99-133%2C174-196%2C 227-249%2C 259-281%2C 302-324%2C 328-350%2C 357-379 and 424-446;gbkey=misc_feature;gene=gntP;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	1141715	1141762	.	+	.	ID=id1916;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=gntP;inference=protein motif:Prosite:PS00012
AM286415.1	EMBL	gene	1143061	1143321	.	-	.	ID=gene1026;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=YE1024
AM286415.1	EMBL	CDS	1143061	1143321	.	-	0	ID=cds979;Parent=gene1026;Dbxref=EnsemblGenomes-Gn:YE1024,EnsemblGenomes-Tr:CAL11122,GOA:A1JKL1,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JKL1,NCBI_GP:CAL11122.1;Name=CAL11122.1;gbkey=CDS;gene=fdx;product=putative [4Fe-4S] ferredoxin;protein_id=CAL11122.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1143247	1143318	.	-	.	ID=id1917;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 26.6%2C E-value 1.2e-05;gbkey=misc_feature;gene=fdx;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	1143262	1143297	.	-	.	ID=id1918;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=fdx;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	1143383	1144225	.	-	.	ID=gene1027;Name=YE1025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1025
AM286415.1	EMBL	CDS	1143383	1144225	.	-	0	ID=cds980;Parent=gene1027;Dbxref=EnsemblGenomes-Gn:YE1025,EnsemblGenomes-Tr:CAL11123,GOA:A1JKL2,InterPro:IPR000281,InterPro:IPR001347,InterPro:IPR009057,InterPro:IPR011991,UniProtKB/TrEMBL:A1JKL2,NCBI_GP:CAL11123.1;Name=CAL11123.1;gbkey=CDS;product=putative RpiR-family transcriptional regulatory protein;protein_id=CAL11123.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1143449	1143856	.	-	.	ID=id1919;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 124.5%2C E-value 1.2e-34;gbkey=misc_feature;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	sequence_feature	1143902	1144225	.	-	.	ID=id1920;Note=Pfam match to entry PF01418 HTH_6%2C Helix-turn-helix domain%2C rpiR family%2C score 135.8%2C E-value 5.2e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF01418
AM286415.1	EMBL	sequence_feature	1144058	1144123	.	-	.	ID=id1921;Note=Predicted helix-turn-helix motif with score 1342.000%2C SD 3.76 at aa 35-56%2C sequence LSSQKLAQQTGVSQSAVVKFAQ;gbkey=misc_feature
AM286415.1	EMBL	gene	1144382	1145104	.	-	.	ID=gene1028;Name=YE1026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1026
AM286415.1	EMBL	CDS	1144382	1145104	.	-	0	ID=cds981;Parent=gene1028;Dbxref=EnsemblGenomes-Gn:YE1026,EnsemblGenomes-Tr:CAL11124,GOA:A1JKL4,InterPro:IPR000792,InterPro:IPR005143,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JKL4,NCBI_GP:CAL11124.1;Name=CAL11124.1;Note=Similar to many LuxR paralogues involved in quorum sensing including the previously characterised Y. enterocolitica regulator: Yersinia enterocolitica transcriptional activator protein YenR SWALL:YENR_YEREN (SWALL:P54295) (244 aa) fasta scores: E(): 5.6e-37%2C 43.15 id in 241 aa%2CSerratia sp. ATCC 39006 SmaR protein SWALL:Q9L3I8 (EMBL:AJ275980) (247 aa) fasta scores: E(): 1.4e-56%2C 58.67 38d in 242 aa%2C and to Erwinia chrysanthemi transcriptional activator protein EchR echR SWALL:ECHR_ERWCH (SWALL:Q46967) (250 aa) fasta scores: E(): 7.1e-45%2C 50.62 38d in 239 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q46967;product=LuxR-family transcriptional regulator;protein_id=CAL11124.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1144394	1144591	.	-	.	ID=id1922;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 43.0%2C E-value 4.4e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	1144640	1145074	.	-	.	ID=id1923;Note=Pfam match to entry PF03472 Autoind_bind%2CAutoinducer binding domain%2C score 113.6%2C E-value 2.5e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF03472
AM286415.1	EMBL	gene	1145384	1145656	.	+	.	ID=gene1029;Name=sfsB;gbkey=Gene;gene=sfsB;gene_biotype=protein_coding;gene_synonym=nlp,sfs7;locus_tag=YE1026A
AM286415.1	EMBL	CDS	1145384	1145656	.	+	0	ID=cds982;Parent=gene1029;Dbxref=EnsemblGenomes-Gn:YE1026A,EnsemblGenomes-Tr:CAL11125,GOA:A1JKL5,InterPro:IPR010982,UniProtKB/TrEMBL:A1JKL5,NCBI_GP:CAL11125.1;Name=CAL11125.1;gbkey=CDS;gene=sfsB;product=putative DNA-binding protein;protein_id=CAL11125.1;transl_table=11
AM286415.1	EMBL	gene	1145742	1146629	.	+	.	ID=gene1030;Name=YE1027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1027
AM286415.1	EMBL	CDS	1145742	1146629	.	+	0	ID=cds983;Parent=gene1030;Dbxref=EnsemblGenomes-Gn:YE1027,EnsemblGenomes-Tr:CAL11126,GOA:A1JKL7,InterPro:IPR001347,InterPro:IPR005486,InterPro:IPR005488,UniProtKB/TrEMBL:A1JKL7,NCBI_GP:CAL11126.1;Name=CAL11126.1;gbkey=CDS;product=putative glucokinase protein;protein_id=CAL11126.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1145907	1146383	.	+	.	ID=id1924;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 43.9%2C E-value 2.4e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	sequence_feature	1146207	1146239	.	+	.	ID=id1925;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1146294	1146347	.	+	.	ID=id1926;Note=PS01272 Glucokinase regulatory protein family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01272
AM286415.1	EMBL	gene	1146835	1147422	.	+	.	ID=gene1031;Name=yfhB;gbkey=Gene;gene=yfhB;gene_biotype=protein_coding;locus_tag=YE1028
AM286415.1	EMBL	CDS	1146835	1147422	.	+	0	ID=cds984;Parent=gene1031;Dbxref=EnsemblGenomes-Gn:YE1028,EnsemblGenomes-Tr:CAL11127,InterPro:IPR006435,InterPro:IPR023214,UniProtKB/TrEMBL:A1JKL8,NCBI_GP:CAL11127.1;Name=CAL11127.1;gbkey=CDS;gene=yfhB;product=putative membrane protein;protein_id=CAL11127.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1146877	1146945	.	+	.	ID=id1927;Note=1 probable transmembrane helix predicted for YE1028 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;gene=yfhB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1147451	1148500	.	-	.	ID=gene1032;Name=YE1029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1029
AM286415.1	EMBL	CDS	1147451	1148500	.	-	0	ID=cds985;Parent=gene1032;Dbxref=EnsemblGenomes-Gn:YE1029,EnsemblGenomes-Tr:CAL11128,UniProtKB/TrEMBL:A1JKL9,NCBI_GP:CAL11128.1;Name=CAL11128.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa0736 SWALL:Q9I5J3 (EMBL:AE004508) (358 aa) fasta scores: E(): 1.2e-07%2C 26.68 38d in 341 aa. The very C-terminus of this protein is highly similar to Rickettsia conorii hypothetical protein Rc0944 SWALL:Q92H28 (EMBL:AE008647) (69 aa) fasta scores: E(): 2e-10%2C 59.42 id in 69 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008647;product=putative integral membrane protein;protein_id=CAL11128.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1148291	1148359	.	-	.	ID=id1928;Note=10 probable transmembrane helices predicted for YE1029 by TMHMM2.0 at aa 48-70%2C 85-104%2C 117-134%2C 144-161%2C166-188%2C 198-220%2C 232-249%2C 264-283%2C 290-307 and 317-331;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1148189	1148248	.	-	.	ID=id1928;Note=10 probable transmembrane helices predicted for YE1029 by TMHMM2.0 at aa 48-70%2C 85-104%2C 117-134%2C 144-161%2C166-188%2C 198-220%2C 232-249%2C 264-283%2C 290-307 and 317-331;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1148099	1148152	.	-	.	ID=id1928;Note=10 probable transmembrane helices predicted for YE1029 by TMHMM2.0 at aa 48-70%2C 85-104%2C 117-134%2C 144-161%2C166-188%2C 198-220%2C 232-249%2C 264-283%2C 290-307 and 317-331;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1148018	1148071	.	-	.	ID=id1928;Note=10 probable transmembrane helices predicted for YE1029 by TMHMM2.0 at aa 48-70%2C 85-104%2C 117-134%2C 144-161%2C166-188%2C 198-220%2C 232-249%2C 264-283%2C 290-307 and 317-331;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1147937	1148005	.	-	.	ID=id1928;Note=10 probable transmembrane helices predicted for YE1029 by TMHMM2.0 at aa 48-70%2C 85-104%2C 117-134%2C 144-161%2C166-188%2C 198-220%2C 232-249%2C 264-283%2C 290-307 and 317-331;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1147841	1147909	.	-	.	ID=id1928;Note=10 probable transmembrane helices predicted for YE1029 by TMHMM2.0 at aa 48-70%2C 85-104%2C 117-134%2C 144-161%2C166-188%2C 198-220%2C 232-249%2C 264-283%2C 290-307 and 317-331;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1147754	1147807	.	-	.	ID=id1928;Note=10 probable transmembrane helices predicted for YE1029 by TMHMM2.0 at aa 48-70%2C 85-104%2C 117-134%2C 144-161%2C166-188%2C 198-220%2C 232-249%2C 264-283%2C 290-307 and 317-331;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1147652	1147711	.	-	.	ID=id1928;Note=10 probable transmembrane helices predicted for YE1029 by TMHMM2.0 at aa 48-70%2C 85-104%2C 117-134%2C 144-161%2C166-188%2C 198-220%2C 232-249%2C 264-283%2C 290-307 and 317-331;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1147580	1147633	.	-	.	ID=id1928;Note=10 probable transmembrane helices predicted for YE1029 by TMHMM2.0 at aa 48-70%2C 85-104%2C 117-134%2C 144-161%2C166-188%2C 198-220%2C 232-249%2C 264-283%2C 290-307 and 317-331;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1147508	1147552	.	-	.	ID=id1928;Note=10 probable transmembrane helices predicted for YE1029 by TMHMM2.0 at aa 48-70%2C 85-104%2C 117-134%2C 144-161%2C166-188%2C 198-220%2C 232-249%2C 264-283%2C 290-307 and 317-331;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	1148739	1149224	.	+	.	ID=gene1033;Name=YE1030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1030
AM286415.1	EMBL	CDS	1148739	1149224	.	+	0	ID=cds986;Parent=gene1033;Dbxref=EnsemblGenomes-Gn:YE1030,EnsemblGenomes-Tr:CAL11129,GOA:A1JKM1,InterPro:IPR002125,InterPro:IPR016192,InterPro:IPR016193,InterPro:IPR028883,UniProtKB/TrEMBL:A1JKM1,NCBI_GP:CAL11129.1;Name=CAL11129.1;gbkey=CDS;product=putative zinc-binding protein;protein_id=CAL11129.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1148739	1149023	.	+	.	ID=id1929;Note=Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region%2C score 126.4%2C E-value 3.5e-35;gbkey=misc_feature;inference=protein motif:PFAM:PF00383
AM286415.1	EMBL	sequence_feature	1148874	1148987	.	+	.	ID=id1930;Note=PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00903
AM286415.1	EMBL	gene	1149388	1150848	.	-	.	ID=gene1034;Name=YE1031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1031
AM286415.1	EMBL	CDS	1149388	1150848	.	-	0	ID=cds987;Parent=gene1034;Dbxref=EnsemblGenomes-Gn:YE1031,EnsemblGenomes-Tr:CAL11130,GOA:A1JKM2,InterPro:IPR000189,InterPro:IPR001638,InterPro:IPR008258,InterPro:IPR023346,InterPro:IPR023703,NCBI_GP:CAL11130.1;Name=CAL11130.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11130.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1149631	1149981	.	-	.	ID=id1931;Note=Pfam match to entry PF01464 SLT%2C Transglycosylase SLT domain%2C score 140.7%2C E-value 1.8e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF01464
AM286415.1	EMBL	sequence_feature	1149838	1149924	.	-	.	ID=id1932;Note=PS00922 Prokaryotic transglycosylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00922
AM286415.1	EMBL	sequence_feature	1150048	1150716	.	-	.	ID=id1933;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 113.1%2C E-value 3.5e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	sequence_feature	1150771	1150830	.	-	.	ID=id1934;Note=1 probable transmembrane helix predicted for YE1031 by TMHMM2.0 at aa 7-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1151163	1155053	.	+	.	ID=gene1035;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=YE1032
AM286415.1	EMBL	CDS	1151163	1155053	.	+	0	ID=cds988;Parent=gene1035;Dbxref=EnsemblGenomes-Gn:YE1032,EnsemblGenomes-Tr:CAL11131,GOA:A1JKM3,InterPro:IPR000728,InterPro:IPR010073,InterPro:IPR010918,InterPro:IPR016188,InterPro:IPR017926,InterPro:IPR022940,InterPro:IPR029062,UniProtKB/TrEMBL:A1JKM3,NCBI_GP:CAL11131.1;Name=CAL11131.1;gbkey=CDS;gene=purL;product=phosphoribosylformylglycinamidine synthase;protein_id=CAL11131.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1151871	1152422	.	+	.	ID=id1935;Note=Pfam match to entry PF00586 AIRS%2C AIR synthase related protein%2C N-terminal domain%2C score 95.8%2C E-value 5.7e-26;gbkey=misc_feature;gene=purL;inference=protein motif:PFAM:PF00586
AM286415.1	EMBL	sequence_feature	1152450	1152932	.	+	.	ID=id1936;Note=Pfam match to entry PF02769 AIRS_C%2C AIR synthase related protein%2C C-terminal domain%2C score 136.4%2C E-value 3.3e-38;gbkey=misc_feature;gene=purL;inference=protein motif:PFAM:PF02769
AM286415.1	EMBL	sequence_feature	1153626	1154072	.	+	.	ID=id1937;Note=Pfam match to entry PF02769 AIRS_C%2C AIR synthase related protein%2C C-terminal domain%2C score 80.6%2C E-value 2.1e-21;gbkey=misc_feature;gene=purL;inference=protein motif:PFAM:PF02769
AM286415.1	EMBL	gene	1155126	1155572	.	-	.	ID=gene1036;Name=YE1033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1033
AM286415.1	EMBL	CDS	1155126	1155572	.	-	0	ID=cds989;Parent=gene1036;Dbxref=EnsemblGenomes-Gn:YE1033,EnsemblGenomes-Tr:CAL11132,UniProtKB/TrEMBL:A1JKM4,NCBI_GP:CAL11132.1;Name=CAL11132.1;Note=Similar in part to Yersinia pestis hypothetical protein Ypo2919 SWALL:Q8ZCQ3 (EMBL:AJ414154) (192 aa) fasta scores: E(): 6.9e-10%2C 30.66 38d in 150 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414154;product=putative exported protein;protein_id=CAL11132.1;transl_table=11
AM286415.1	EMBL	gene	1156224	1156562	.	+	.	ID=gene1037;Name=YE1034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1034
AM286415.1	EMBL	CDS	1156224	1156562	.	+	0	ID=cds990;Parent=gene1037;Dbxref=EnsemblGenomes-Gn:YE1034,EnsemblGenomes-Tr:CAL11133,UniProtKB/TrEMBL:A1JKM5,NCBI_GP:CAL11133.1;Name=CAL11133.1;Note=no significant database hits;gbkey=CDS;product=putative exported protein;protein_id=CAL11133.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1156368	1156436	.	+	.	ID=id1938;Note=2 probable transmembrane helices predicted for YE1034 by TMHMM2.0 at aa 49-71 and 91-108;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1156494	1156547	.	+	.	ID=id1938;Note=2 probable transmembrane helices predicted for YE1034 by TMHMM2.0 at aa 49-71 and 91-108;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	1156693	1158144	.	+	.	ID=gene1038;Name=YE1035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1035
AM286415.1	EMBL	CDS	1156693	1158144	.	+	0	ID=cds991;Parent=gene1038;Dbxref=EnsemblGenomes-Gn:YE1035,EnsemblGenomes-Tr:CAL11134,GOA:A1JKM6,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB/TrEMBL:A1JKM6,NCBI_GP:CAL11134.1;Name=CAL11134.1;gbkey=CDS;product=two-component system sensor kinase;protein_id=CAL11134.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1156750	1156818	.	+	.	ID=id1939;Note=2 probable transmembrane helices predicted for YE1035 by TMHMM2.0 at aa 20-42 and 183-205;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1157239	1157307	.	+	.	ID=id1939;Note=2 probable transmembrane helices predicted for YE1035 by TMHMM2.0 at aa 20-42 and 183-205;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	1157239	1157451	.	+	.	ID=id1940;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 41.7%2C E-value 1.1e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	1157461	1157667	.	+	.	ID=id1941;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 68.3%2C E-value 1e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	1157794	1158129	.	+	.	ID=id1942;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 107.4%2C E-value 1.8e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	1158229	1159230	.	+	.	ID=gene1039;Name=YE1036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1036
AM286415.1	EMBL	CDS	1158229	1159230	.	+	0	ID=cds992;Parent=gene1039;Dbxref=EnsemblGenomes-Gn:YE1036,EnsemblGenomes-Tr:CAL11135,InterPro:IPR025262,UniProtKB/TrEMBL:A1JKM8,NCBI_GP:CAL11135.1;Name=CAL11135.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL11135.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1158265	1158297	.	+	.	ID=id1943;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1159193	1160530	.	+	.	ID=gene1040;Name=YE1037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1037
AM286415.1	EMBL	CDS	1159193	1160530	.	+	0	ID=cds993;Parent=gene1040;Dbxref=EnsemblGenomes-Gn:YE1037,EnsemblGenomes-Tr:CAL11136,GOA:A1JKM9,InterPro:IPR001789,InterPro:IPR002078,InterPro:IPR003593,InterPro:IPR009057,InterPro:IPR011006,InterPro:IPR025662,InterPro:IPR025943,InterPro:IPR025944,InterPro:IPR027417,UniProtKB/TrEMBL:A1JKM9,NCBI_GP:CAL11136.1;Name=CAL11136.1;gbkey=CDS;product=two-component system response regulator;protein_id=CAL11136.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1159211	1159570	.	+	.	ID=id1944;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 158.8%2C E-value 6e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	1159601	1160266	.	+	.	ID=id1945;Note=Pfam match to entry PF00158 Sigma54_activat%2CSigma-54 interaction domain%2C score 502.0%2C E-value 3e-148;gbkey=misc_feature;inference=protein motif:PFAM:PF00158
AM286415.1	EMBL	sequence_feature	1159673	1159714	.	+	.	ID=id1946;Note=PS00675 Sigma-54 interaction domain ATP-binding region A signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00675
AM286415.1	EMBL	sequence_feature	1159859	1159906	.	+	.	ID=id1947;Note=PS00676 Sigma-54 interaction domain ATP-binding region B signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00676
AM286415.1	EMBL	sequence_feature	1160240	1160269	.	+	.	ID=id1948;Note=PS00688 Sigma-54 interaction domain C-terminal part signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00688
AM286415.1	EMBL	gene	1160791	1162413	.	+	.	ID=gene1041;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;gene_synonym=adgA;locus_tag=YE1038
AM286415.1	EMBL	CDS	1160791	1162413	.	+	0	ID=cds994;Parent=gene1041;Dbxref=EnsemblGenomes-Gn:YE1038,EnsemblGenomes-Tr:CAL11137,GOA:A1JKN1,InterPro:IPR000132,InterPro:IPR003010,InterPro:IPR003694,InterPro:IPR014445,InterPro:IPR014729,InterPro:IPR022310,UniProtKB/TrEMBL:A1JKN1,NCBI_GP:CAL11137.1;Name=CAL11137.1;gbkey=CDS;gene=nadE;product=putative glutamine-dependent NAD;protein_id=CAL11137.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1160800	1161573	.	+	.	ID=id1949;Note=Pfam match to entry PF00795 CN_hydrolase%2CCarbon-nitrogen hydrolase%2C score 16.5%2C E-value 1.3e-10;gbkey=misc_feature;gene=nadE;inference=protein motif:PFAM:PF00795
AM286415.1	EMBL	sequence_feature	1160899	1160946	.	+	.	ID=id1950;Note=PS00920 Nitrilases / cyanide hydratase signature 1.;gbkey=misc_feature;gene=nadE;inference=protein motif:Prosite:PS00920
AM286415.1	EMBL	sequence_feature	1161730	1162341	.	+	.	ID=id1951;Note=Pfam match to entry PF02540 NAD_synthase%2C NAD synthase%2C score 236.4%2C E-value 2.6e-68;gbkey=misc_feature;gene=nadE;inference=protein motif:PFAM:PF02540
AM286415.1	EMBL	gene	1162428	1162766	.	+	.	ID=gene1042;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=YE1039
AM286415.1	EMBL	CDS	1162428	1162766	.	+	0	ID=cds995;Parent=gene1042;Dbxref=EnsemblGenomes-Gn:YE1039,EnsemblGenomes-Tr:CAL11138,GOA:A1JKN3,InterPro:IPR002187,InterPro:IPR002332,InterPro:IPR011322,InterPro:IPR015867,InterPro:IPR017918,UniProtKB/TrEMBL:A1JKN3,NCBI_GP:CAL11138.1;Name=CAL11138.1;gbkey=CDS;gene=glnB;product=nitrogen regulatory protein P-II;protein_id=CAL11138.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1162428	1162763	.	+	.	ID=id1952;Note=Pfam match to entry PF00543 P-II%2C Nitrogen regulatory protein P-II%2C score 216.6%2C E-value 2.4e-62;gbkey=misc_feature;gene=glnB;inference=protein motif:PFAM:PF00543
AM286415.1	EMBL	sequence_feature	1162563	1162580	.	+	.	ID=id1953;Note=PS00496 P-II protein urydylation site.;gbkey=misc_feature;gene=glnB;inference=protein motif:Prosite:PS00496
AM286415.1	EMBL	sequence_feature	1162674	1162715	.	+	.	ID=id1954;Note=PS00638 P-II protein C-terminal region signature.;gbkey=misc_feature;gene=glnB;inference=protein motif:Prosite:PS00638
AM286415.1	EMBL	gene	1162967	1164262	.	-	.	ID=gene1043;Name=YE1040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1040
AM286415.1	EMBL	CDS	1162967	1164262	.	-	0	ID=cds996;Parent=gene1043;Dbxref=EnsemblGenomes-Gn:YE1040,EnsemblGenomes-Tr:CAL11139,InterPro:IPR019733,UniProtKB/TrEMBL:A1JKN4,NCBI_GP:CAL11139.1;Name=CAL11139.1;Note=Similar to several including: Escherichia coli hypothetical protein YhfT or b3377 SWALL:YHFT_ECOLI (SWALL:P45546) (434 aa) fasta scores: E(): 2.7e-118%2C74.65 38d in 434 aa and to Bacillus halodurans hypothetical protein Bh0589 SWALL:Q9KF96 (EMBL:AP001509) (429 aa) fasta scores: E(): 3.2e-37%2C 33.86 38d in 443 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45546;product=putative integral membrane protein;protein_id=CAL11139.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1164182	1164250	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1164053	1164121	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1163942	1164010	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1163837	1163905	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1163756	1163824	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1163669	1163737	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1163519	1163587	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1163348	1163416	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1163270	1163338	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1163093	1163161	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1162982	1163050	.	-	.	ID=id1955;Note=11 probable transmembrane helices predicted for YE1040 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 120-142%2C147-169%2C 176-198%2C 226-248%2C 283-305%2C 309-331%2C 368-390 and 405-427;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	1164273	1164626	.	-	.	ID=gene1044;Name=YE1041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1041
AM286415.1	EMBL	CDS	1164273	1164626	.	-	0	ID=cds997;Parent=gene1044;Dbxref=EnsemblGenomes-Gn:YE1041,EnsemblGenomes-Tr:CAL11140,InterPro:IPR021238,UniProtKB/TrEMBL:A1JKN5,NCBI_GP:CAL11140.1;Name=CAL11140.1;Note=Highly similar to Escherichia coli hypothetical protein YhfU or b3378 SWALL:YHFU_ECOLI (SWALL:P45547) (130 aa) fasta scores: E(): 3.3e-31%2C 76.06 38d in 117 aa. Note the differing N-termini. Also similar to Bacillus halodurans hypothetical protein Bh0588 bh0588 SWALL:Q9KF97 (EMBL:AP001509) (119 aa) fasta scores: E(): 7.3e-13%2C 42.6 id in 115 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45547;product=putative inner membrane protein;protein_id=CAL11140.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1164420	1164488	.	-	.	ID=id1956;Note=1 probable transmembrane helix predicted for YE1041 by TMHMM2.0 at aa 47-69;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1164629	1165516	.	-	.	ID=gene1045;Name=YE1042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1042
AM286415.1	EMBL	CDS	1164629	1165516	.	-	0	ID=cds998;Parent=gene1045;Dbxref=EnsemblGenomes-Gn:YE1042,EnsemblGenomes-Tr:CAL11141,GOA:A1JKN6,InterPro:IPR001559,InterPro:IPR027280,UniProtKB/TrEMBL:A1JKN6,NCBI_GP:CAL11141.1;Name=CAL11141.1;Note=Similar to Escherichia coli phosphotriesterase homology protein Php (the function of which is unclear) or b3379 SWALL:PHP_ECOLI (SWALL:P45548) (292 aa) fasta scores: E(): 1.7e-79%2C 69.79 38d in 288 aa and to Mycobacterium tuberculosis phosphotriesterase protein Rv0230c or Mt0240 or Mtcy08d5.26C SWALL:PHP_MYCTU (SWALL:P96413) (326 aa) fasta scores: E(): 4.4e-17%2C 29.87 id in 308 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P96413;product=putative hydrolase;protein_id=CAL11141.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1164632	1165513	.	-	.	ID=id1957;Note=Pfam match to entry PF02126 PTE%2C Phosphotriesterase family%2C score 435.1%2C E-value 4.2e-128;gbkey=misc_feature;inference=protein motif:PFAM:PF02126
AM286415.1	EMBL	sequence_feature	1165046	1165093	.	-	.	ID=id1958;Note=PS01323 Phosphotriesterase family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01323
AM286415.1	EMBL	gene	1165608	1166777	.	-	.	ID=gene1046;Name=YE1043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1043
AM286415.1	EMBL	CDS	1165608	1166777	.	-	0	ID=cds999;Parent=gene1046;Dbxref=EnsemblGenomes-Gn:YE1043,EnsemblGenomes-Tr:CAL11142,InterPro:IPR001608,InterPro:IPR029066,UniProtKB/TrEMBL:A1JKN8,NCBI_GP:CAL11142.1;Name=CAL11142.1;Note=Similar to Escherichia coli hypothetical protein YhfX or b3381 SWALL:YHFX_ECOLI (SWALL:P45550) (387 aa) fasta scores: E(): 3e-85%2C 55.24 38d in 391 aa and to Bacillus halodurans hypothetical protein Bh0591 SWALL:Q9KF94 (EMBL:AP001509) (386 aa) fasta scores: E(): 7.9e-44%2C 36.62 38d in 385 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45550;product=conserved hypothetical protein;protein_id=CAL11142.1;transl_table=11
AM286415.1	EMBL	gene	1166896	1167276	.	-	.	ID=gene1047;Name=YE1044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1044
AM286415.1	EMBL	CDS	1166896	1167276	.	-	0	ID=cds1000;Parent=gene1047;Dbxref=EnsemblGenomes-Gn:YE1044,EnsemblGenomes-Tr:CAL11143,GOA:A1JKN9,InterPro:IPR011608,UniProtKB/TrEMBL:A1JKN9,NCBI_GP:CAL11143.1;Name=CAL11143.1;Note=Similar to several proteins of undefined function including: Escherichia coli hypothetical protein YhfY or b3382 SWALL:YHFY_ECOLI (SWALL:P45551) (120 aa) fasta scores: E(): 5.7e-20%2C 52.13 38d in 117 aa and to Haemophilus influenzae hypothetical protein Hi0487 SWALL:YHFY_HAEIN (SWALL:P44003) (125 aa) fasta scores: E(): 0.00014%2C 31.68 38d in 101 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45551;product=conserved hypothetical protein;protein_id=CAL11143.1;transl_table=11
AM286415.1	EMBL	gene	1167324	1168223	.	-	.	ID=gene1048;Name=YE1045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1045
AM286415.1	EMBL	CDS	1167324	1168223	.	-	0	ID=cds1001;Parent=gene1048;Dbxref=EnsemblGenomes-Gn:YE1045,EnsemblGenomes-Tr:CAL11144,GOA:A1JKP1,InterPro:IPR011991,UniProtKB/TrEMBL:A1JKP1,NCBI_GP:CAL11144.1;Name=CAL11144.1;Note=Similar to Bacillus halodurans hypothetical protein Bh0586 SWALL:Q9KF99 (EMBL:AP001509) (306 aa) fasta scores: E(): 1.6e-27%2C 33.22 38d in 307 aa and%2C in part%2C to Escherichia coli hypothetical protein YhfZ or b3383 SWALL:YHFZ_ECOLI (SWALL:P45552) (273 aa) fasta scores: E(): 6.3e-56%2C 52.74 38d in 273 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45552;product=DNA-binding protein;protein_id=CAL11144.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1168071	1168136	.	-	.	ID=id1959;Note=Predicted helix-turn-helix motif with score 1248.000%2C SD 3.44 at aa 30-51%2C sequence KTIDELSDDFGISVGVVQHALK;gbkey=misc_feature
AM286415.1	EMBL	gene	1168487	1169677	.	-	.	ID=gene1049;Name=hmp;gbkey=Gene;gene=hmp;gene_biotype=protein_coding;gene_synonym=fsrB,hmpA,hmpX;locus_tag=YE1046
AM286415.1	EMBL	CDS	1168487	1169677	.	-	0	ID=cds1002;Parent=gene1049;Dbxref=EnsemblGenomes-Gn:YE1046,EnsemblGenomes-Tr:CAL11145,GOA:A1JKP2,InterPro:IPR000971,InterPro:IPR001221,InterPro:IPR001433,InterPro:IPR008333,InterPro:IPR009050,InterPro:IPR012292,InterPro:IPR017927,InterPro:IPR017938,InterPro:IPR023950,UniProtKB/TrEMBL:A1JKP2,NCBI_GP:CAL11145.1;Name=CAL11145.1;gbkey=CDS;gene=hmp;product=flavohemoprotein;protein_id=CAL11145.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1168553	1168903	.	-	.	ID=id1960;Note=Pfam match to entry PF00175 NAD_binding_1%2COxidoreductase NAD-binding domain%2C score 77.6%2C E-value 1.7e-20;gbkey=misc_feature;gene=hmp;inference=protein motif:PFAM:PF00175
AM286415.1	EMBL	sequence_feature	1168916	1169218	.	-	.	ID=id1961;Note=Pfam match to entry PF00970 FAD_binding_6%2COxidoreductase FAD-binding domain%2C score 42.1%2C E-value 8e-10;gbkey=misc_feature;gene=hmp;inference=protein motif:PFAM:PF00970
AM286415.1	EMBL	sequence_feature	1169270	1169677	.	-	.	ID=id1962;Note=Pfam match to entry PF00042 globin%2C Globin%2C score 98.9%2C E-value 6.7e-27;gbkey=misc_feature;gene=hmp;inference=protein motif:PFAM:PF00042
AM286415.1	EMBL	gene	1170064	1171317	.	+	.	ID=gene1050;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=YE1047
AM286415.1	EMBL	CDS	1170064	1171317	.	+	0	ID=cds1003;Parent=gene1050;Dbxref=EnsemblGenomes-Gn:YE1047,EnsemblGenomes-Tr:CAL11146,GOA:A1JKP3,InterPro:IPR001085,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR019798,NCBI_GP:CAL11146.1;Name=CAL11146.1;gbkey=CDS;gene=glyA;product=serine hydroxymethyltransferase;protein_id=CAL11146.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1170085	1171221	.	+	.	ID=id1963;Note=Pfam match to entry PF00464 SHMT%2C Serine hydroxymethyltransferase%2C score 946.8%2C E-value 3.6e-282;gbkey=misc_feature;gene=glyA;inference=protein motif:PFAM:PF00464
AM286415.1	EMBL	sequence_feature	1170724	1170774	.	+	.	ID=id1964;Note=PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=glyA;inference=protein motif:Prosite:PS00096
AM286415.1	EMBL	gene	1171666	1172823	.	+	.	ID=gene1051;Name=hcaT;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=YE1049
AM286415.1	EMBL	CDS	1171666	1172823	.	+	0	ID=cds1004;Parent=gene1051;Dbxref=EnsemblGenomes-Gn:YE1049,EnsemblGenomes-Tr:CAL11147,GOA:A1JKP4,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR026032,UniProtKB/TrEMBL:A1JKP4,NCBI_GP:CAL11147.1;Name=CAL11147.1;gbkey=CDS;gene=hcaT;product=putative transport permease protein;protein_id=CAL11147.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1171675	1172808	.	+	.	ID=id1965;Note=Pfam match to entry PF01306 LacY_symp%2C LacY proton/sugar symporter%2C score -248.7%2C E-value 0.00049;gbkey=misc_feature;gene=hcaT;inference=protein motif:PFAM:PF01306
AM286415.1	EMBL	sequence_feature	1171690	1171758	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1171786	1171854	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1171873	1171941	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1171954	1172022	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1172059	1172127	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1172137	1172205	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1172287	1172355	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1172383	1172451	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1172470	1172520	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1172548	1172616	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1172650	1172718	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1172731	1172784	.	+	.	ID=id1966;Note=12 probable transmembrane helices predicted for YE1049 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 97-119%2C132-154%2C 158-180%2C 208-230%2C 240-262%2C 269-285%2C 295-317%2C329-351 and 356-373;gbkey=misc_feature;gene=hcaT;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	1172820	1174031	.	-	.	ID=gene1052;Name=YE1050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1050
AM286415.1	EMBL	CDS	1172820	1174031	.	-	0	ID=cds1005;Parent=gene1052;Dbxref=EnsemblGenomes-Gn:YE1050,EnsemblGenomes-Tr:CAL11148,GOA:A1JKP5,InterPro:IPR011608,UniProtKB/TrEMBL:A1JKP5,NCBI_GP:CAL11148.1;Name=CAL11148.1;gbkey=CDS;product=putative RNA-binding protein;protein_id=CAL11148.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1173114	1173401	.	-	.	ID=id1967;Note=Pfam match to entry PF00874 PRD%2C PRD domain%2C score 57.7%2C E-value 1.6e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00874
AM286415.1	EMBL	gene	1174255	1174929	.	+	.	ID=gene1053;Name=YE1051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1051
AM286415.1	EMBL	CDS	1174255	1174929	.	+	0	ID=cds1006;Parent=gene1053;Dbxref=EnsemblGenomes-Gn:YE1051,EnsemblGenomes-Tr:CAL11149,InterPro:IPR010412,InterPro:IPR016537,UniProtKB/TrEMBL:A1JKP7,NCBI_GP:CAL11149.1;Name=CAL11149.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11149.1;transl_table=11
AM286415.1	EMBL	gene	1174944	1175936	.	+	.	ID=gene1054;Name=YE1052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1052
AM286415.1	EMBL	CDS	1174944	1175936	.	+	0	ID=cds1007;Parent=gene1054;Dbxref=EnsemblGenomes-Gn:YE1052,EnsemblGenomes-Tr:CAL11150,GOA:A1JKP8,InterPro:IPR011541,UniProtKB/TrEMBL:A1JKP8,NCBI_GP:CAL11150.1;Name=CAL11150.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11150.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1174962	1175030	.	+	.	ID=id1968;Note=7 probable transmembrane helices predicted for YE1052 by TMHMM2.0 at aa 7-29%2C 66-88%2C 109-131%2C 146-163%2C219-238%2C 248-270 and 291-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1175139	1175207	.	+	.	ID=id1968;Note=7 probable transmembrane helices predicted for YE1052 by TMHMM2.0 at aa 7-29%2C 66-88%2C 109-131%2C 146-163%2C219-238%2C 248-270 and 291-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1175268	1175336	.	+	.	ID=id1968;Note=7 probable transmembrane helices predicted for YE1052 by TMHMM2.0 at aa 7-29%2C 66-88%2C 109-131%2C 146-163%2C219-238%2C 248-270 and 291-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1175379	1175432	.	+	.	ID=id1968;Note=7 probable transmembrane helices predicted for YE1052 by TMHMM2.0 at aa 7-29%2C 66-88%2C 109-131%2C 146-163%2C219-238%2C 248-270 and 291-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1175598	1175657	.	+	.	ID=id1968;Note=7 probable transmembrane helices predicted for YE1052 by TMHMM2.0 at aa 7-29%2C 66-88%2C 109-131%2C 146-163%2C219-238%2C 248-270 and 291-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1175685	1175753	.	+	.	ID=id1968;Note=7 probable transmembrane helices predicted for YE1052 by TMHMM2.0 at aa 7-29%2C 66-88%2C 109-131%2C 146-163%2C219-238%2C 248-270 and 291-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1175814	1175882	.	+	.	ID=id1968;Note=7 probable transmembrane helices predicted for YE1052 by TMHMM2.0 at aa 7-29%2C 66-88%2C 109-131%2C 146-163%2C219-238%2C 248-270 and 291-313;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	1176132	1176938	.	-	.	ID=gene1055;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=YE1054
AM286415.1	EMBL	CDS	1176132	1176938	.	-	0	ID=cds1008;Parent=gene1055;Dbxref=EnsemblGenomes-Gn:YE1054,EnsemblGenomes-Tr:CAL11151,GOA:A1JKP9,InterPro:IPR000760,InterPro:IPR020550,InterPro:IPR020583,InterPro:IPR022337,UniProtKB/TrEMBL:A1JKP9,NCBI_GP:CAL11151.1;Name=CAL11151.1;gbkey=CDS;gene=suhB;product=putative inositol monophosphatase family protein;protein_id=CAL11151.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1176138	1176938	.	-	.	ID=id1969;Note=Pfam match to entry PF00459 inositol_P%2C Inositol monophosphatase family%2C score 368.0%2C E-value 6.5e-108;gbkey=misc_feature;gene=suhB;inference=protein motif:PFAM:PF00459
AM286415.1	EMBL	sequence_feature	1176264	1176308	.	-	.	ID=id1970;Note=PS00630 Inositol monophosphatase family signature 2.;gbkey=misc_feature;gene=suhB;inference=protein motif:Prosite:PS00630
AM286415.1	EMBL	sequence_feature	1176657	1176698	.	-	.	ID=id1971;Note=PS00629 Inositol monophosphatase family signature 1.;gbkey=misc_feature;gene=suhB;inference=protein motif:Prosite:PS00629
AM286415.1	EMBL	gene	1177057	1177830	.	+	.	ID=gene1056;Name=YE1055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1055
AM286415.1	EMBL	CDS	1177057	1177830	.	+	0	ID=cds1009;Parent=gene1056;Dbxref=EnsemblGenomes-Gn:YE1055,EnsemblGenomes-Tr:CAL11152,GOA:A1JKQ0,InterPro:IPR001537,InterPro:IPR004384,InterPro:IPR029026,InterPro:IPR029028,NCBI_GP:CAL11152.1;Name=CAL11152.1;gbkey=CDS;product=putative SpoU-family rRNA methylase;protein_id=CAL11152.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1177066	1177518	.	+	.	ID=id1972;Note=Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family%2C score 109.9%2C E-value 3.1e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF00588
AM286415.1	EMBL	gene	1177987	1178481	.	+	.	ID=gene1057;Name=YE1056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1056
AM286415.1	EMBL	CDS	1177987	1178481	.	+	0	ID=cds1010;Parent=gene1057;Dbxref=EnsemblGenomes-Gn:YE1056,EnsemblGenomes-Tr:CAL11153,GOA:A1JKQ1,InterPro:IPR000944,InterPro:IPR010242,InterPro:IPR011991,NCBI_GP:CAL11153.1;Name=CAL11153.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11153.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1177987	1178349	.	+	.	ID=id1973;Note=Pfam match to entry PF02082 UPF0074%2CUncharacterized protein family UPF0074%2C score 233.8%2CE-value 1.6e-67;gbkey=misc_feature;inference=protein motif:PFAM:PF02082
AM286415.1	EMBL	sequence_feature	1178062	1178127	.	+	.	ID=id1974;Note=Predicted helix-turn-helix motif with score 1222.000%2C SD 3.35 at aa 26-47%2C sequence VPLADISERQGISLSYLEQLFS;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1178131	1178187	.	+	.	ID=id1975;Note=PS01332 Uncharacterized protein family UPF0074 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01332
AM286415.1	EMBL	gene	1178535	1179764	.	+	.	ID=gene1058;Name=iscS;gbkey=Gene;gene=iscS;gene_biotype=protein_coding;gene_synonym=nifS,yfhO;locus_tag=YE1057
AM286415.1	EMBL	CDS	1178535	1179764	.	+	0	ID=cds1011;Parent=gene1058;Dbxref=EnsemblGenomes-Gn:YE1057,EnsemblGenomes-Tr:CAL11154,GOA:A1JKQ2,InterPro:IPR000192,InterPro:IPR010240,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR016454,InterPro:IPR020578,UniProtKB/TrEMBL:A1JKQ2,NCBI_GP:CAL11154.1;Name=CAL11154.1;gbkey=CDS;gene=iscS;product=putative aminotransferase;protein_id=CAL11154.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1178592	1179656	.	+	.	ID=id1976;Note=Pfam match to entry PF00266 aminotran_5%2CAminotransferase class-V%2C score 405.6%2C E-value 3.1e-119;gbkey=misc_feature;gene=iscS;inference=protein motif:PFAM:PF00266
AM286415.1	EMBL	sequence_feature	1179138	1179197	.	+	.	ID=id1977;Note=PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=iscS;inference=protein motif:Prosite:PS00595
AM286415.1	EMBL	gene	1179795	1180181	.	+	.	ID=gene1059;Name=nifU;gbkey=Gene;gene=nifU;gene_biotype=protein_coding;locus_tag=YE1058
AM286415.1	EMBL	CDS	1179795	1180181	.	+	0	ID=cds1012;Parent=gene1059;Dbxref=EnsemblGenomes-Gn:YE1058,EnsemblGenomes-Tr:CAL11155,GOA:A1JKQ3,InterPro:IPR002871,InterPro:IPR011339,UniProtKB/TrEMBL:A1JKQ3,NCBI_GP:CAL11155.1;Name=CAL11155.1;gbkey=CDS;gene=nifU;product=NifU family protein;protein_id=CAL11155.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1179798	1180178	.	+	.	ID=id1978;Note=Pfam match to entry PF01592 NifU_N%2C NifU-like N terminal domain%2C score 283.1%2C E-value 2.3e-82;gbkey=misc_feature;gene=nifU;inference=protein motif:PFAM:PF01592
AM286415.1	EMBL	gene	1180285	1180608	.	+	.	ID=gene1060;Name=YE1059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1059
AM286415.1	EMBL	CDS	1180285	1180608	.	+	0	ID=cds1013;Parent=gene1060;Dbxref=EnsemblGenomes-Gn:YE1059,EnsemblGenomes-Tr:CAL11156,GOA:A1JKQ4,InterPro:IPR000361,InterPro:IPR011302,InterPro:IPR016092,InterPro:IPR017870,NCBI_GP:CAL11156.1;Name=CAL11156.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11156.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1180288	1180602	.	+	.	ID=id1979;Note=Pfam match to entry PF01521 HesB-like%2C HesB-like domain%2C score 187.6%2C E-value 1.3e-53;gbkey=misc_feature;inference=protein motif:PFAM:PF01521
AM286415.1	EMBL	sequence_feature	1180546	1180599	.	+	.	ID=id1980;Note=PS01152 Hypothetical hesB/yadR/yfhF family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01152
AM286415.1	EMBL	gene	1180716	1181240	.	+	.	ID=gene1061;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=YE1060
AM286415.1	EMBL	CDS	1180716	1181240	.	+	0	ID=cds1014;Parent=gene1061;Dbxref=EnsemblGenomes-Gn:YE1060,EnsemblGenomes-Tr:CAL11157,GOA:A1JKQ5,InterPro:IPR001623,InterPro:IPR004640,InterPro:IPR009073,NCBI_GP:CAL11157.1;Name=CAL11157.1;gbkey=CDS;gene=hscB;product=chaperone protein HscB;protein_id=CAL11157.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1180719	1180937	.	+	.	ID=id1981;Note=Pfam match to entry PF00226 DnaJ%2C DnaJ domain %2Cscore 47.6%2C E-value 1.8e-11;gbkey=misc_feature;gene=hscB;inference=protein motif:PFAM:PF00226
AM286415.1	EMBL	gene	1181573	1183423	.	+	.	ID=gene1062;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;gene_synonym=hsc;locus_tag=YE1061
AM286415.1	EMBL	CDS	1181573	1183423	.	+	0	ID=cds1015;Parent=gene1062;Dbxref=EnsemblGenomes-Gn:YE1061,EnsemblGenomes-Tr:CAL11158,GOA:A1JKQ7,InterPro:IPR010236,InterPro:IPR013126,InterPro:IPR018181,InterPro:IPR029047,InterPro:IPR029048,NCBI_GP:CAL11158.1;Name=CAL11158.1;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=CAL11158.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1181633	1183375	.	+	.	ID=id1982;Note=Pfam match to entry PF00012 HSP70%2C Hsp70 protein %2Cscore 891.7%2C E-value 1.4e-265;gbkey=misc_feature;gene=hscA;inference=protein motif:PFAM:PF00012
AM286415.1	EMBL	sequence_feature	1181642	1181665	.	+	.	ID=id1983;Note=PS00297 Heat shock hsp70 proteins family signature 1.;gbkey=misc_feature;gene=hscA;inference=protein motif:Prosite:PS00297
AM286415.1	EMBL	sequence_feature	1182185	1182226	.	+	.	ID=id1984;Note=PS00329 Heat shock hsp70 proteins family signature 2.;gbkey=misc_feature;gene=hscA;inference=protein motif:Prosite:PS00329
AM286415.1	EMBL	sequence_feature	1182566	1182610	.	+	.	ID=id1985;Note=PS01036 Heat shock hsp70 proteins family signature 3.;gbkey=misc_feature;gene=hscA;inference=protein motif:Prosite:PS01036
AM286415.1	EMBL	gene	1183426	1183761	.	+	.	ID=gene1063;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=YE1062
AM286415.1	EMBL	CDS	1183426	1183761	.	+	0	ID=cds1016;Parent=gene1063;Dbxref=EnsemblGenomes-Gn:YE1062,EnsemblGenomes-Tr:CAL11159,GOA:A1JKQ9,InterPro:IPR001041,InterPro:IPR001055,InterPro:IPR011536,InterPro:IPR012675,InterPro:IPR018298,UniProtKB/TrEMBL:A1JKQ9,NCBI_GP:CAL11159.1;Name=CAL11159.1;gbkey=CDS;gene=fdx;product=adrenodoxin family ferredoxin;protein_id=CAL11159.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1183453	1183704	.	+	.	ID=id1986;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domain%2C score 91.0%2C E-value 1.5e-24;gbkey=misc_feature;gene=fdx;inference=protein motif:PFAM:PF00111
AM286415.1	EMBL	sequence_feature	1183549	1183581	.	+	.	ID=id1987;Note=PS00814 Adrenodoxin family%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=fdx;inference=protein motif:Prosite:PS00814
AM286415.1	EMBL	gene	1183980	1184180	.	+	.	ID=gene1064;Name=YE1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1063
AM286415.1	EMBL	CDS	1183980	1184180	.	+	0	ID=cds1017;Parent=gene1064;Dbxref=EnsemblGenomes-Gn:YE1063,EnsemblGenomes-Tr:CAL11160,GOA:A1JKR0,InterPro:IPR007479,UniProtKB/TrEMBL:A1JKR0,NCBI_GP:CAL11160.1;Name=CAL11160.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11160.1;transl_table=11
AM286415.1	EMBL	gene	1184400	1185683	.	+	.	ID=gene1065;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=YE1064
AM286415.1	EMBL	CDS	1184400	1185683	.	+	0	ID=cds1018;Parent=gene1065;Dbxref=EnsemblGenomes-Gn:YE1064,EnsemblGenomes-Tr:CAL11161,GOA:A1JKR1,InterPro:IPR000819,InterPro:IPR008330,InterPro:IPR011356,UniProtKB/TrEMBL:A1JKR1,NCBI_GP:CAL11161.1;Name=CAL11161.1;gbkey=CDS;gene=pepB;product=peptidase B;protein_id=CAL11161.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1184706	1185656	.	+	.	ID=id1988;Note=Pfam match to entry PF00883 Peptidase_M17%2C Cytosol aminopeptidase family%2C catalytic domain%2C score 565.6%2CE-value 2.1e-167;gbkey=misc_feature;gene=pepB;inference=protein motif:PFAM:PF00883
AM286415.1	EMBL	sequence_feature	1185210	1185233	.	+	.	ID=id1989;Note=PS00631 Cytosol aminopeptidase signature.;gbkey=misc_feature;gene=pepB;inference=protein motif:Prosite:PS00631
AM286415.1	EMBL	gene	1185919	1186743	.	+	.	ID=gene1066;Name=YE1065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1065
AM286415.1	EMBL	CDS	1185919	1186743	.	+	0	ID=cds1019;Parent=gene1066;Dbxref=EnsemblGenomes-Gn:YE1065,EnsemblGenomes-Tr:CAL11162,InterPro:IPR009839,InterPro:IPR027945,UniProtKB/TrEMBL:A1JKR2,NCBI_GP:CAL11162.1;Name=CAL11162.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11162.1;transl_table=11
AM286415.1	EMBL	gene	1186779	1191815	.	+	.	ID=gene1067;Name=YE1066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1066
AM286415.1	EMBL	CDS	1186779	1191815	.	+	0	ID=cds1020;Parent=gene1067;Dbxref=EnsemblGenomes-Gn:YE1066,EnsemblGenomes-Tr:CAL11163,GOA:A1JKR4,InterPro:IPR001599,InterPro:IPR002890,InterPro:IPR008930,InterPro:IPR011625,InterPro:IPR019565,InterPro:IPR021868,InterPro:IPR026284,UniProtKB/TrEMBL:A1JKR4,NCBI_GP:CAL11163.1;Name=CAL11163.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11163.1;transl_table=11
AM286415.1	EMBL	gene	1191865	1194204	.	+	.	ID=gene1068;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=YE1067
AM286415.1	EMBL	CDS	1191865	1194204	.	+	0	ID=cds1021;Parent=gene1068;Dbxref=EnsemblGenomes-Gn:YE1067,EnsemblGenomes-Tr:CAL11164,GOA:A1JKR5,InterPro:IPR001264,InterPro:IPR001460,InterPro:IPR009647,InterPro:IPR011815,InterPro:IPR012338,InterPro:IPR023346,UniProtKB/TrEMBL:A1JKR5,NCBI_GP:CAL11164.1;Name=CAL11164.1;Note=Similar to Escherichia coli penicillin-binding protein 1c PbpC or B2519 SWALL:PBPC_ECOLI (SWALL:P76577) (770 aa) fasta scores: E(): 3.4e-198%2C 62.06 38d in 767 aa and to Salmonella typhi penicillin-binding protein 1c PbpC or Sty2777 SWALL:Q8Z4N8 (EMBL:AL627275) (771 aa) fasta scores: E(): 2.3e-204%2C 64.4 38d in 767 aa;gbkey=CDS;gene=pbpC;inference=similar to sequence:UniProtKB:P76577;product=penicillin-binding protein;protein_id=CAL11164.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1192000	1192512	.	+	.	ID=id1990;Note=Pfam match to entry PF00912 Transglycosyl%2CTransglycosylase%2C score 272.3%2C E-value 4e-79;gbkey=misc_feature;gene=pbpC;inference=protein motif:PFAM:PF00912
AM286415.1	EMBL	sequence_feature	1192705	1193550	.	+	.	ID=id1991;Note=Pfam match to entry PF00905 Transpeptidase%2CPenicillin binding protein transpeptidase domain%2C score -13.2%2C E-value 1.7e-09;gbkey=misc_feature;gene=pbpC;inference=protein motif:PFAM:PF00905
AM286415.1	EMBL	gene	1194366	1196891	.	+	.	ID=gene1069;Name=YE1068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1068
AM286415.1	EMBL	CDS	1194366	1196891	.	+	0	ID=cds1022;Parent=gene1069;Dbxref=EnsemblGenomes-Gn:YE1068,EnsemblGenomes-Tr:CAL11165,GOA:A1JKR6,InterPro:IPR000182,InterPro:IPR001064,InterPro:IPR011024,InterPro:IPR015059,InterPro:IPR015185,InterPro:IPR016181,UniProtKB/TrEMBL:A1JKR6,NCBI_GP:CAL11165.1;Name=CAL11165.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11165.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1194570	1194617	.	+	.	ID=id1992;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	sequence_feature	1194699	1194746	.	+	.	ID=id1993;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	sequence_feature	1194864	1194911	.	+	.	ID=id1994;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	gene	1197185	1197610	.	+	.	ID=gene1070;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=YE1069
AM286415.1	EMBL	CDS	1197185	1197610	.	+	0	ID=cds1023;Parent=gene1070;Dbxref=EnsemblGenomes-Gn:YE1069,EnsemblGenomes-Tr:CAL11166,GOA:A1JKR7,InterPro:IPR001564,InterPro:IPR023005,NCBI_GP:CAL11166.1;Name=CAL11166.1;gbkey=CDS;gene=ndk;product=nucleoside diphosphate kinase;protein_id=CAL11166.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1197194	1197607	.	+	.	ID=id1995;Note=Pfam match to entry PF00334 NDK%2C Nucleoside diphosphate kinase%2C score 294.0%2C E-value 1.2e-85;gbkey=misc_feature;gene=ndk;inference=protein motif:PFAM:PF00334
AM286415.1	EMBL	sequence_feature	1197524	1197550	.	+	.	ID=id1996;Note=PS00469 Nucleoside diphosphate kinases active site.;gbkey=misc_feature;gene=ndk;inference=protein motif:Prosite:PS00469
AM286415.1	EMBL	gene	1197838	1199034	.	+	.	ID=gene1071;Name=YE1070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1070
AM286415.1	EMBL	CDS	1197838	1199034	.	+	0	ID=cds1024;Parent=gene1071;Dbxref=EnsemblGenomes-Gn:YE1070,EnsemblGenomes-Tr:CAL11167,GOA:A1JKR9,InterPro:IPR004383,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR013785,InterPro:IPR027492,NCBI_GP:CAL11167.1;Name=CAL11167.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11167.1;transl_table=11
AM286415.1	EMBL	gene	1199229	1199978	.	+	.	ID=gene1072;Name=YE1071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1071
AM286415.1	EMBL	CDS	1199229	1199978	.	+	0	ID=cds1025;Parent=gene1072;Dbxref=EnsemblGenomes-Gn:YE1071,EnsemblGenomes-Tr:CAL11168,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR013105,InterPro:IPR013360,InterPro:IPR019734,UniProtKB/TrEMBL:A1JKS0,NCBI_GP:CAL11168.1;Name=CAL11168.1;gbkey=CDS;product=putative fimbrial biogenesis protein;protein_id=CAL11168.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1199253	1199285	.	+	.	ID=id1997;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1199325	1199426	.	+	.	ID=id1998;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 21.9%2C E-value 0.001;gbkey=misc_feature;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	sequence_feature	1199427	1199528	.	+	.	ID=id1999;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 10.2%2C E-value 0.24;gbkey=misc_feature;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	sequence_feature	1199637	1199738	.	+	.	ID=id2000;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 18.8%2C E-value 0.0084;gbkey=misc_feature;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	gene	1200016	1200984	.	+	.	ID=gene1073;Name=yfgA;gbkey=Gene;gene=yfgA;gene_biotype=protein_coding;locus_tag=YE1072
AM286415.1	EMBL	CDS	1200016	1200984	.	+	0	ID=cds1026;Parent=gene1073;Dbxref=EnsemblGenomes-Gn:YE1072,EnsemblGenomes-Tr:CAL11169,GOA:A1JKS1,InterPro:IPR001387,InterPro:IPR010982,InterPro:IPR023690,InterPro:IPR025194,NCBI_GP:CAL11169.1;Name=CAL11169.1;gbkey=CDS;gene=yfgA;product=putative DNA-binding protein;protein_id=CAL11169.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1200016	1200081	.	+	.	ID=id2001;Note=Predicted helix-turn-helix motif with score 1081.000%2C SD 2.87 at aa 1-22%2C sequence MRLRQAREALGLTQQMVAERLC;gbkey=misc_feature;gene=yfgA
AM286415.1	EMBL	sequence_feature	1200022	1200204	.	+	.	ID=id2002;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 31.8%2C E-value 1e-06;gbkey=misc_feature;gene=yfgA;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	1200049	1200114	.	+	.	ID=id2003;Note=Predicted helix-turn-helix motif with score 1667.000%2C SD 4.86 at aa 12-33%2C sequence LTQQMVAERLCLKVSTIRDIEE;gbkey=misc_feature;gene=yfgA
AM286415.1	EMBL	sequence_feature	1200049	1200081	.	+	.	ID=id2004;Note=Predicted helix-turn-helix motif with score 1081.000%2C SD 2.87 at aa 12-22%2C sequence LTQQMVAERLC;gbkey=misc_feature;gene=yfgA
AM286415.1	EMBL	sequence_feature	1200298	1200366	.	+	.	ID=id2005;Note=1 probable transmembrane helix predicted for YE1072 by TMHMM2.0 at aa 95-117;gbkey=misc_feature;gene=yfgA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1201105	1202229	.	+	.	ID=gene1074;Name=aarC;gbkey=Gene;gene=aarC;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=YE1073
AM286415.1	EMBL	CDS	1201105	1202229	.	+	0	ID=cds1027;Parent=gene1074;Dbxref=EnsemblGenomes-Gn:YE1073,EnsemblGenomes-Tr:CAL11170,GOA:A1JKS2,InterPro:IPR004588,InterPro:IPR011005,InterPro:IPR013785,InterPro:IPR016425,NCBI_GP:CAL11170.1;Name=CAL11170.1;gbkey=CDS;gene=aarC;product=putative acetyltransferase;protein_id=CAL11170.1;transl_table=11
AM286415.1	EMBL	gene	1202445	1203719	.	+	.	ID=gene1075;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=YE1074
AM286415.1	EMBL	CDS	1202445	1203719	.	+	0	ID=cds1028;Parent=gene1075;Dbxref=EnsemblGenomes-Gn:YE1074,EnsemblGenomes-Tr:CAL11171,GOA:A1JKS3,InterPro:IPR004154,InterPro:IPR004516,InterPro:IPR006195,InterPro:IPR015807,NCBI_GP:CAL11171.1;Name=CAL11171.1;gbkey=CDS;gene=hisS;product=histidyl-tRNA synthetase;protein_id=CAL11171.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1202472	1202921	.	+	.	ID=id2006;Note=Pfam match to entry PF00587 tRNA-synt_2b%2C tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)%2C score 179.8%2C E-value 2.8e-51;gbkey=misc_feature;gene=hisS;inference=protein motif:PFAM:PF00587
AM286415.1	EMBL	sequence_feature	1203360	1203389	.	+	.	ID=id2007;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=hisS;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	1203414	1203710	.	+	.	ID=id2008;Note=Pfam match to entry PF03129 HGTP_anticodon%2CAnticodon binding domain%2C score 56.9%2C E-value 2.8e-14;gbkey=misc_feature;gene=hisS;inference=protein motif:PFAM:PF03129
AM286415.1	EMBL	gene	1203733	1204353	.	+	.	ID=gene1076;Name=yfgM;gbkey=Gene;gene=yfgM;gene_biotype=protein_coding;locus_tag=YE1075
AM286415.1	EMBL	CDS	1203733	1204353	.	+	0	ID=cds1029;Parent=gene1076;Dbxref=EnsemblGenomes-Gn:YE1075,EnsemblGenomes-Tr:CAL11172,InterPro:IPR011990,InterPro:IPR018704,InterPro:IPR026039,UniProtKB/TrEMBL:A1JKS4,NCBI_GP:CAL11172.1;Name=CAL11172.1;gbkey=CDS;gene=yfgM;product=putative membrane protein;protein_id=CAL11172.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1203793	1203861	.	+	.	ID=id2009;Note=1 probable transmembrane helix predicted for YE1075 by TMHMM2.0 at aa 21-43;gbkey=misc_feature;gene=yfgM;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1204365	1205546	.	+	.	ID=gene1077;Name=yfgL;gbkey=Gene;gene=yfgL;gene_biotype=protein_coding;locus_tag=YE1076
AM286415.1	EMBL	CDS	1204365	1205546	.	+	0	ID=cds1030;Parent=gene1077;Dbxref=EnsemblGenomes-Gn:YE1076,EnsemblGenomes-Tr:CAL11173,GOA:A1JKS5,InterPro:IPR002372,InterPro:IPR011047,InterPro:IPR017687,InterPro:IPR018391,InterPro:IPR027295,UniProtKB/TrEMBL:A1JKS5,NCBI_GP:CAL11173.1;Name=CAL11173.1;gbkey=CDS;gene=yfgL;product=putative lipoprotein;protein_id=CAL11173.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1204392	1204424	.	+	.	ID=id2010;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yfgL;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1204572	1204685	.	+	.	ID=id2011;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 17.7%2C E-value 0.014;gbkey=misc_feature;gene=yfgL;inference=protein motif:PFAM:PF01011
AM286415.1	EMBL	sequence_feature	1204725	1204838	.	+	.	ID=id2012;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 25.4%2C E-value 8.4e-05;gbkey=misc_feature;gene=yfgL;inference=protein motif:PFAM:PF01011
AM286415.1	EMBL	sequence_feature	1204845	1204958	.	+	.	ID=id2013;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 21.9%2C E-value 0.00097;gbkey=misc_feature;gene=yfgL;inference=protein motif:PFAM:PF01011
AM286415.1	EMBL	sequence_feature	1204980	1205093	.	+	.	ID=id2014;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 15.1%2C E-value 0.033;gbkey=misc_feature;gene=yfgL;inference=protein motif:PFAM:PF01011
AM286415.1	EMBL	sequence_feature	1205133	1205246	.	+	.	ID=id2015;Note=Pfam match to entry PF01011 Bacterial_PQQ%2C PQQ enzyme repeat%2C score 33.9%2C E-value 2.4e-07;gbkey=misc_feature;gene=yfgL;inference=protein motif:PFAM:PF01011
AM286415.1	EMBL	gene	1205746	1207230	.	+	.	ID=gene1078;Name=engA;gbkey=Gene;gene=engA;gene_biotype=protein_coding;locus_tag=YE1077
AM286415.1	EMBL	CDS	1205746	1207230	.	+	0	ID=cds1031;Parent=gene1078;Dbxref=EnsemblGenomes-Gn:YE1077,EnsemblGenomes-Tr:CAL11174,GOA:A1JKS6,InterPro:IPR003593,InterPro:IPR005225,InterPro:IPR006073,InterPro:IPR015946,InterPro:IPR016484,InterPro:IPR027417,NCBI_GP:CAL11174.1;Name=CAL11174.1;gbkey=CDS;gene=engA;product=putative GTP-binding protein;protein_id=CAL11174.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1205770	1205793	.	+	.	ID=id2016;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=engA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1205959	1206801	.	+	.	ID=id2017;Note=Pfam match to entry PF01926 MMR_HSR1%2C GTPase of unknown function%2C score 183.1%2C E-value 2.9e-52;gbkey=misc_feature;gene=engA;inference=protein motif:PFAM:PF01926
AM286415.1	EMBL	sequence_feature	1206382	1206405	.	+	.	ID=id2018;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=engA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1207339	1208295	.	+	.	ID=gene1079;Name=YE1078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1078
AM286415.1	EMBL	CDS	1207339	1208295	.	+	0	ID=cds1032;Parent=gene1079;Dbxref=EnsemblGenomes-Gn:YE1078,EnsemblGenomes-Tr:CAL11175,GOA:A1JKS7,InterPro:IPR004776,UniProtKB/TrEMBL:A1JKS7,NCBI_GP:CAL11175.1;Name=CAL11175.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11175.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1207348	1207416	.	+	.	ID=id2019;Note=9 probable transmembrane helices predicted for YE1078 by TMHMM2.0 at aa 4-26%2C 43-65%2C 70-92%2C 128-150%2C165-187%2C 200-222%2C 232-254%2C 261-280 and 290-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	1207465	1207533	.	+	.	ID=id2019;Note=9 probable transmembrane helices predicted for YE1078 by TMHMM2.0 at aa 4-26%2C 43-65%2C 70-92%2C 128-150%2C165-187%2C 200-222%2C 232-254%2C 261-280 and 290-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	1207546	1207614	.	+	.	ID=id2019;Note=9 probable transmembrane helices predicted for YE1078 by TMHMM2.0 at aa 4-26%2C 43-65%2C 70-92%2C 128-150%2C165-187%2C 200-222%2C 232-254%2C 261-280 and 290-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	1207720	1207788	.	+	.	ID=id2019;Note=9 probable transmembrane helices predicted for YE1078 by TMHMM2.0 at aa 4-26%2C 43-65%2C 70-92%2C 128-150%2C165-187%2C 200-222%2C 232-254%2C 261-280 and 290-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	1207831	1207899	.	+	.	ID=id2019;Note=9 probable transmembrane helices predicted for YE1078 by TMHMM2.0 at aa 4-26%2C 43-65%2C 70-92%2C 128-150%2C165-187%2C 200-222%2C 232-254%2C 261-280 and 290-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	1207936	1208004	.	+	.	ID=id2019;Note=9 probable transmembrane helices predicted for YE1078 by TMHMM2.0 at aa 4-26%2C 43-65%2C 70-92%2C 128-150%2C165-187%2C 200-222%2C 232-254%2C 261-280 and 290-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	1208032	1208100	.	+	.	ID=id2019;Note=9 probable transmembrane helices predicted for YE1078 by TMHMM2.0 at aa 4-26%2C 43-65%2C 70-92%2C 128-150%2C165-187%2C 200-222%2C 232-254%2C 261-280 and 290-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	1208119	1208178	.	+	.	ID=id2019;Note=9 probable transmembrane helices predicted for YE1078 by TMHMM2.0 at aa 4-26%2C 43-65%2C 70-92%2C 128-150%2C165-187%2C 200-222%2C 232-254%2C 261-280 and 290-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	1208206	1208274	.	+	.	ID=id2019;Note=9 probable transmembrane helices predicted for YE1078 by TMHMM2.0 at aa 4-26%2C 43-65%2C 70-92%2C 128-150%2C165-187%2C 200-222%2C 232-254%2C 261-280 and 290-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	1207396	1207782	.	+	.	ID=id2020;Note=Pfam match to entry PF03547 Auxin_eff%2C Auxin Efflux Carrier%2C score 33.8%2C E-value 2.6e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF03547
AM286415.1	EMBL	gene	1208324	1208548	.	+	.	ID=gene1080;Name=YE1079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1079
AM286415.1	EMBL	CDS	1208324	1208548	.	+	0	ID=cds1033;Parent=gene1080;Dbxref=EnsemblGenomes-Gn:YE1079,EnsemblGenomes-Tr:CAL11176,GOA:A1JKS9,InterPro:IPR001841,InterPro:IPR010807,InterPro:IPR029037,UniProtKB/TrEMBL:A1JKS9,NCBI_GP:CAL11176.1;Name=CAL11176.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11176.1;transl_table=11
AM286415.1	EMBL	gene	1208595	1209971	.	-	.	ID=gene1081;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=YE1080
AM286415.1	EMBL	CDS	1208595	1209971	.	-	0	ID=cds1034;Parent=gene1081;Dbxref=EnsemblGenomes-Gn:YE1080,EnsemblGenomes-Tr:CAL11177,GOA:A1JKT0,InterPro:IPR003753,InterPro:IPR020579,InterPro:IPR025824,NCBI_GP:CAL11177.1;Name=CAL11177.1;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease VII large subunit;protein_id=CAL11177.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1208853	1209380	.	-	.	ID=id2021;Note=Pfam match to entry PF02601 Exonuc_VII_L%2CExonuclease VII%2C large subunit%2C score 273.1%2C E-value 2.4e-79;gbkey=misc_feature;gene=xseA;inference=protein motif:PFAM:PF02601
AM286415.1	EMBL	sequence_feature	1209657	1209884	.	-	.	ID=id2022;Note=Pfam match to entry PF01336 tRNA_anti%2C OB-fold nucleic acid binding domain%2C score 38.6%2C E-value 9.2e-09;gbkey=misc_feature;gene=xseA;inference=protein motif:PFAM:PF01336
AM286415.1	EMBL	gene	1210140	1211603	.	+	.	ID=gene1082;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;gene_synonym=guaR;locus_tag=YE1081
AM286415.1	EMBL	CDS	1210140	1211603	.	+	0	ID=cds1035;Parent=gene1082;Dbxref=EnsemblGenomes-Gn:YE1081,EnsemblGenomes-Tr:CAL11178,GOA:A1JKT1,InterPro:IPR000644,InterPro:IPR001093,InterPro:IPR005990,InterPro:IPR013785,InterPro:IPR015875,UniProtKB/TrEMBL:A1JKT1,NCBI_GP:CAL11178.1;Name=CAL11178.1;gbkey=CDS;gene=guaB;product=inosine-5'-monophosphate dehydrogenase;protein_id=CAL11178.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1210143	1211591	.	+	.	ID=id2023;Note=Pfam match to entry PF00478 IMPDH%2C IMP dehydrogenase / GMP reductase%2C score 725.5%2C E-value 1.5e-215;gbkey=misc_feature;gene=guaB;inference=protein motif:PFAM:PF00478
AM286415.1	EMBL	sequence_feature	1210410	1210571	.	+	.	ID=id2024;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 45.3%2C E-value 8.9e-11;gbkey=misc_feature;gene=guaB;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1210596	1210757	.	+	.	ID=id2025;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 46.1%2C E-value 5.1e-11;gbkey=misc_feature;gene=guaB;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1211022	1211060	.	+	.	ID=id2026;Note=PS00487 IMP dehydrogenase / GMP reductase signature.;gbkey=misc_feature;gene=guaB;inference=protein motif:Prosite:PS00487
AM286415.1	EMBL	gene	1211788	1213365	.	+	.	ID=gene1083;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=YE1082
AM286415.1	EMBL	CDS	1211788	1213365	.	+	0	ID=cds1036;Parent=gene1083;Dbxref=EnsemblGenomes-Gn:YE1082,EnsemblGenomes-Tr:CAL11179,GOA:A1JKT2,InterPro:IPR001674,InterPro:IPR004739,InterPro:IPR014729,InterPro:IPR017926,InterPro:IPR022310,InterPro:IPR022955,InterPro:IPR025777,InterPro:IPR029062,NCBI_GP:CAL11179.1;Name=CAL11179.1;gbkey=CDS;gene=guaA;product=putative GMP synthase;protein_id=CAL11179.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1211818	1212390	.	+	.	ID=id2027;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 166.9%2C E-value 2.2e-47;gbkey=misc_feature;gene=guaA;inference=protein motif:PFAM:PF00117
AM286415.1	EMBL	sequence_feature	1212028	1212063	.	+	.	ID=id2028;Note=PS00442 Glutamine amidotransferases class-I active site.;gbkey=misc_feature;gene=guaA;inference=protein motif:Prosite:PS00442
AM286415.1	EMBL	sequence_feature	1212469	1212537	.	+	.	ID=id2029;Note=Pfam match to entry PF03054 tRNA_Me_trans%2C tRNA methyl transferase%2C score 30.6%2C E-value 5.5e-10;gbkey=misc_feature;gene=guaA;inference=protein motif:PFAM:PF03054
AM286415.1	EMBL	sequence_feature	1213000	1213359	.	+	.	ID=id2030;Note=Pfam match to entry PF00958 GMP_synt_C%2C GMP synthase C terminal domain%2C score 255.7%2C E-value 4.1e-74;gbkey=misc_feature;gene=guaA;inference=protein motif:PFAM:PF00958
AM286415.1	EMBL	gene	1213613	1215490	.	+	.	ID=gene1084;Name=YE1083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1083
AM286415.1	EMBL	CDS	1213613	1215490	.	+	0	ID=cds1037;Parent=gene1084;Dbxref=EnsemblGenomes-Gn:YE1083,EnsemblGenomes-Tr:CAL11180,UniProtKB/TrEMBL:A1JKT3,NCBI_GP:CAL11180.1;Name=CAL11180.1;Note=Similar in part to Yersinia pestis hypothetical protein Ypo0466 SWALL:Q8ZIM9 (EMBL:AJ414142) (815 aa) fasta scores: E(): 0.019%2C 21.42 38d in 280 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414142;product=hypothetical protein;protein_id=CAL11180.1;transl_table=11
AM286415.1	EMBL	gene	1215721	1216287	.	+	.	ID=gene1085;Name=YE1084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1084
AM286415.1	EMBL	CDS	1215721	1216287	.	+	0	ID=cds1038;Parent=gene1085;Dbxref=EnsemblGenomes-Gn:YE1084,EnsemblGenomes-Tr:CAL11181,InterPro:IPR024651,UniProtKB/TrEMBL:A1JKT4,NCBI_GP:CAL11181.1;Name=CAL11181.1;Note=Similar in part to Ralstonia solanacearum putative transmembrane dehydrogenase Rsc0770 or Rs05084 SWALL:Q8Y1C0 (EMBL:AL646061) (163 aa) fasta scores: E(): 1.5e-13%2C 40.26 38d in 154 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646061;product=hypothetical protein;protein_id=CAL11181.1;transl_table=11
AM286415.1	EMBL	gene	1216305	1217924	.	+	.	ID=gene1086;Name=YE1085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1085
AM286415.1	EMBL	CDS	1216305	1217924	.	+	0	ID=cds1039;Parent=gene1086;Dbxref=EnsemblGenomes-Gn:YE1085,EnsemblGenomes-Tr:CAL11182,GOA:A1JKT5,InterPro:IPR007867,UniProtKB/TrEMBL:A1JKT5,NCBI_GP:CAL11182.1;Name=CAL11182.1;Note=Similar to Ralstonia solanacearum putative transmembrane dehydrogenase Rsc0771 or Rs05083 SWALL:Q8Y1B9 (EMBL:AL646061) (539 aa) fasta scores: E(): 2.6e-152%2C 72.42 38d in 533 aa and to Gluconobacter oxydans solbitol dehydrogenase large subunit SldL SWALL:Q9LBK8 (EMBL:AB039821) (545 aa) fasta scores: E(): 2.3e-96%2C49.17 38d in 547 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646061;product=hypothetical protein;protein_id=CAL11182.1;transl_table=11
AM286415.1	EMBL	gene	1217941	1219194	.	+	.	ID=gene1087;Name=YE1086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1086
AM286415.1	EMBL	CDS	1217941	1219194	.	+	0	ID=cds1040;Parent=gene1087;Dbxref=EnsemblGenomes-Gn:YE1086,EnsemblGenomes-Tr:CAL11183,GOA:A1JKT7,InterPro:IPR003088,InterPro:IPR009056,InterPro:IPR014353,UniProtKB/TrEMBL:A1JKT7,NCBI_GP:CAL11183.1;Name=CAL11183.1;Note=Similar to many including: Gluconobacter oxydans alcohol dehydrogenase cytochrome C subunit precursor AdhB SWALL:CYCA_GLUOX (SWALL:Q47945) (478 aa) fasta scores: E(): 3.5e-43%2C 37.85 38d in 428 aa and to Pantoea agglomerans cytochrome C subunit II SWALL:Q9RH53 (EMBL:AF068066) (470 aa) fasta scores: E(): 4.3e-66%2C42.25 38d in 426 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q47945;product=putative cytochrome C;protein_id=CAL11183.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1218004	1218324	.	+	.	ID=id2031;Note=Pfam match to entry PF00034 cytochrome_c%2CCytochrome c%2C score 9.9%2C E-value 0.0027;gbkey=misc_feature;inference=protein motif:PFAM:PF00034
AM286415.1	EMBL	sequence_feature	1218055	1218072	.	+	.	ID=id2032;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1218493	1218510	.	+	.	ID=id2033;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1218871	1219137	.	+	.	ID=id2034;Note=Pfam match to entry PF00034 cytochrome_c%2CCytochrome c%2C score 14.1%2C E-value 0.001;gbkey=misc_feature;inference=protein motif:PFAM:PF00034
AM286415.1	EMBL	sequence_feature	1218910	1218927	.	+	.	ID=id2035;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	1219265	1219705	.	-	.	ID=gene1088;Name=YE1087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1087
AM286415.1	EMBL	CDS	1219265	1219705	.	-	0	ID=cds1041;Parent=gene1088;Dbxref=EnsemblGenomes-Gn:YE1087,EnsemblGenomes-Tr:CAL11184,GOA:A1JKU1,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JKU1,NCBI_GP:CAL11184.1;Name=CAL11184.1;Note=Similar to several including: Escherichia coli hypothetical acetyltransferase YiaC or b3550 SWALL:YIAC_ECOLI (SWALL:P37664) (146 aa) fasta scores: E(): 4.1e-05%2C 33.88 38d in 121 aa and to Vibrio cholerae hypothetical protein Vca0382 SWALL:Q9KMH2 (EMBL:AE004374) (141 aa) fasta scores: E(): 5.4e-15%2C 36.02 38d in 136 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37664;product=putative acetyltransferase;protein_id=CAL11184.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1219337	1219555	.	-	.	ID=id2036;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 46.9%2C E-value 3e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	transcript	1219794	1219897	.	+	.	ID=rna56;Note=TPP riboswitch (THI element) (RF00059) as predicted by Rfam%2C score 72.92%2C positions 1 to 105;gbkey=misc_RNA
AM286415.1	EMBL	exon	1219794	1219897	.	+	.	ID=id2037;Parent=rna56;Note=TPP riboswitch (THI element) (RF00059) as predicted by Rfam%2C score 72.92%2C positions 1 to 105;gbkey=misc_RNA
AM286415.1	EMBL	gene	1219890	1220690	.	+	.	ID=gene1089;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=YE1088
AM286415.1	EMBL	CDS	1219890	1220690	.	+	0	ID=cds1042;Parent=gene1089;Dbxref=EnsemblGenomes-Gn:YE1088,EnsemblGenomes-Tr:CAL11185,GOA:A1JKU3,InterPro:IPR004399,InterPro:IPR013749,InterPro:IPR029056,UniProtKB/TrEMBL:A1JKU3,NCBI_GP:CAL11185.1;Name=CAL11185.1;gbkey=CDS;gene=thiD;product=putative phosphomethylpyrimidine kinase;protein_id=CAL11185.1;transl_table=11
AM286415.1	EMBL	gene	1220810	1221574	.	-	.	ID=gene1090;Name=YE1089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1089
AM286415.1	EMBL	CDS	1220810	1221574	.	-	0	ID=cds1043;Parent=gene1090;Dbxref=EnsemblGenomes-Gn:YE1089,EnsemblGenomes-Tr:CAL11186,UniProtKB/TrEMBL:A1JKU4,NCBI_GP:CAL11186.1;Name=CAL11186.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11186.1;transl_table=11
AM286415.1	EMBL	gene	1221970	1222500	.	+	.	ID=gene1091;Name=YE1091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1091
AM286415.1	EMBL	CDS	1221970	1222500	.	+	0	ID=cds1044;Parent=gene1091;Dbxref=EnsemblGenomes-Gn:YE1091,EnsemblGenomes-Tr:CAL11187,GOA:A1JKU5,InterPro:IPR014453,UniProtKB/TrEMBL:A1JKU5,NCBI_GP:CAL11187.1;Name=CAL11187.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11187.1;transl_table=11
AM286415.1	EMBL	gene	1222580	1223545	.	-	.	ID=gene1092;Name=gutQ;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=YE1092
AM286415.1	EMBL	CDS	1222580	1223545	.	-	0	ID=cds1045;Parent=gene1092;Dbxref=EnsemblGenomes-Gn:YE1092,EnsemblGenomes-Tr:CAL11188,GOA:A1JKU6,InterPro:IPR000644,InterPro:IPR001347,InterPro:IPR004800,UniProtKB/TrEMBL:A1JKU6,NCBI_GP:CAL11188.1;Name=CAL11188.1;Note=Similar to Escherichia coli protein%2C GutQ%2C of unknown function positioned within the glucitol operon (SrlQ or b2708) SWALL:GUTQ_ECOLI (SWALL:P17115) (321 aa) fasta scores: E(): 1.7e-77%2C 67.5 38d in 320 aa%2C and to Salmonella typhi putative phosphosugar binding protein sty2960 SWALL:Q8Z4C7 (EMBL:AL627276) (321 aa) fasta scores: E(): 5.4e-77%2C 66.56 38d in 320 aa;gbkey=CDS;gene=gutQ;inference=similar to sequence:UniProtKB:P17115;product=conserved hypothetical protein;protein_id=CAL11188.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1222586	1222747	.	-	.	ID=id2038;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 36.4%2C E-value 4.2e-08;gbkey=misc_feature;gene=gutQ;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1222778	1222939	.	-	.	ID=id2039;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 43.0%2C E-value 4.3e-10;gbkey=misc_feature;gene=gutQ;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1223036	1223440	.	-	.	ID=id2040;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 131.9%2C E-value 7.5e-37;gbkey=misc_feature;gene=gutQ;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	gene	1223538	1224308	.	-	.	ID=gene1093;Name=gutR;gbkey=Gene;gene=gutR;gene_biotype=protein_coding;locus_tag=YE1093
AM286415.1	EMBL	CDS	1223538	1224308	.	-	0	ID=cds1046;Parent=gene1093;Dbxref=EnsemblGenomes-Gn:YE1093,EnsemblGenomes-Tr:CAL11189,GOA:A1JKU8,InterPro:IPR001034,InterPro:IPR011991,InterPro:IPR014036,InterPro:IPR018356,UniProtKB/TrEMBL:A1JKU8,NCBI_GP:CAL11189.1;Name=CAL11189.1;Note=Similar to Escherichia coli glucitol operon repressor SrlR or GutR or B2707 SWALL:SRLR_ECOLI (SWALL:P15082) (257 aa) fasta scores: E(): 3.3e-64%2C 68.35 id in 256 aa and to Erwinia amylovora repressor of srl operon SrlR SWALL:O32526 (EMBL:Y14603) (255 aa) fasta scores: E(): 1.1e-66%2C 70.98 38d in 255 aa;gbkey=CDS;gene=gutR;inference=similar to sequence:UniProtKB:P15082;product=putative glucitol operon repressor;protein_id=CAL11189.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1223616	1224293	.	-	.	ID=id2041;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 357.0%2C E-value 1.3e-104;gbkey=misc_feature;gene=gutR;inference=protein motif:PFAM:PF00455
AM286415.1	EMBL	sequence_feature	1224189	1224293	.	-	.	ID=id2042;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;gbkey=misc_feature;gene=gutR;inference=protein motif:Prosite:PS00894
AM286415.1	EMBL	gene	1224393	1224758	.	-	.	ID=gene1094;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=YE1094
AM286415.1	EMBL	CDS	1224393	1224758	.	-	0	ID=cds1047;Parent=gene1094;Dbxref=EnsemblGenomes-Gn:YE1094,EnsemblGenomes-Tr:CAL11190,InterPro:IPR009693,UniProtKB/TrEMBL:A1JKV0,NCBI_GP:CAL11190.1;Name=CAL11190.1;Note=Similar to Escherichia coli glucitol operon activator protein GutM or SrlM or b2706 SWALL:GUTM_ECOLI (SWALL:P15081) (119 aa) fasta scores: E(): 1.1e-26%2C 59.48 id in 116 aa and to Escherichia coli O157:H7 glucitol operon activator GutM or Z4013 or ecs3562 SWALL:Q8X855 (EMBL:AE005498) (119 aa) fasta scores: E(): 6.5e-27%2C59.48 38d in 116 aa;gbkey=CDS;gene=gutM;inference=similar to sequence:UniProtKB:P15081;product=glucitol operon activator protein;protein_id=CAL11190.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1224681	1224749	.	-	.	ID=id2043;Note=1 probable transmembrane helix predicted for YE1094 by TMHMM2.0 at aa 4-26;gbkey=misc_feature;gene=gutM;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1225058	1225894	.	-	.	ID=gene1095;Name=gutD;gbkey=Gene;gene=gutD;gene_biotype=protein_coding;locus_tag=YE1095
AM286415.1	EMBL	CDS	1225058	1225894	.	-	0	ID=cds1048;Parent=gene1095;Dbxref=EnsemblGenomes-Gn:YE1095,EnsemblGenomes-Tr:CAL11191,GOA:A1JKV1,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,UniProtKB/TrEMBL:A1JKV1,NCBI_GP:CAL11191.1;Name=CAL11191.1;Note=Similar to Escherichia coli sorbitol-6-phosphate 2-dehydrogenase SrlD or GutD or b2705 SWALL:SRLD_ECOLI (SWALL:P05707) (259 aa) fasta scores: E(): 1.2e-78%2C 81.85 id in 259 aa%2C and to Erwinia amylovora sorbitol-6-phosphate dehydrogenase SrlD SWALL:O32524 (EMBL:Y14603) (259 aa) fasta scores: E(): 4.9e-81%2C 83.78 id in 259 aa;gbkey=CDS;gene=gutD;inference=similar to sequence:UniProtKB:P05707;product=sorbitol-6-phosphate 2-dehydrogenase;protein_id=CAL11191.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1225070	1225837	.	-	.	ID=id2044;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 261.2%2C E-value 8.9e-76;gbkey=misc_feature;gene=gutD;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	sequence_feature	1225331	1225417	.	-	.	ID=id2045;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=gutD;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	gene	1225970	1226332	.	-	.	ID=gene1096;Name=gutB;gbkey=Gene;gene=gutB;gene_biotype=protein_coding;locus_tag=YE1096
AM286415.1	EMBL	CDS	1225970	1226332	.	-	0	ID=cds1049;Parent=gene1096;Dbxref=EnsemblGenomes-Gn:YE1096,EnsemblGenomes-Tr:CAL11192,GOA:A1JKV4,InterPro:IPR004716,UniProtKB/TrEMBL:A1JKV4,NCBI_GP:CAL11192.1;Name=CAL11192.1;Note=Similar to Escherichia coli PTS system%2Cglucitol/sorbitol-specific IIa component SrlB or GutB or b2704 SWALL:PTHA_ECOLI (SWALL:P05706) (123 aa) fasta scores: E(): 1.6e-25%2C 60.16 38d in 118 aa and to Salmonella typhimurium PTS family%2Cglucitol/sorbitol-specific Slrb or Stm2834 SWALL:Q8ZMK1 (EMBL:AE008829) (120 aa) fasta scores: E(): 1.8e-26%2C62.18 38d in 119 aa;gbkey=CDS;gene=gutB;inference=similar to sequence:UniProtKB:P05706;product=pts system%2C glucitol/sorbitol-specific iia component;protein_id=CAL11192.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1225976	1226332	.	-	.	ID=id2046;Note=Pfam match to entry PF03829 PTSIIA_gutA%2C PTS system glucitol/sorbitol-specific IIA component%2C score 192.9%2CE-value 3.4e-55;gbkey=misc_feature;gene=gutB;inference=protein motif:PFAM:PF03829
AM286415.1	EMBL	gene	1226398	1227423	.	-	.	ID=gene1097;Name=gutE;gbkey=Gene;gene=gutE;gene_biotype=protein_coding;locus_tag=YE1097
AM286415.1	EMBL	CDS	1226398	1227423	.	-	0	ID=cds1050;Parent=gene1097;Dbxref=EnsemblGenomes-Gn:YE1097,EnsemblGenomes-Tr:CAL11193,GOA:A1JKV5,InterPro:IPR004702,InterPro:IPR011618,InterPro:IPR011638,UniProtKB/TrEMBL:A1JKV5,NCBI_GP:CAL11193.1;Name=CAL11193.1;Note=Similar to Escherichia coli pts system%2Cglucitol/sorbitol-specific IIBC component SrlE or GutE or b2703 SWALL:PTHB_ECOLI (SWALL:P56580) (319 aa) fasta scores: E(): 1.5e-59%2C 79.52 38d in 337 aa and to Erwinia amylovora PTS system%2C glucitol/sorbitol-specific IIBC component SrlE SWALL:PTHB_ERWAM (SWALL:O32522) (333 aa) fasta scores: E(): 4.8e-96%2C 78.06 38d in 342 aa;gbkey=CDS;gene=gutE;inference=similar to sequence:UniProtKB:P56580;product=pts system%2C glucitol/sorbitol-specific iibc component;protein_id=CAL11193.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1226404	1227417	.	-	.	ID=id2047;Note=Pfam match to entry PF03612 EIIBC-GUT%2C Sorbitol phosphotransferase enzyme II%2C score 788.7%2C E-value 1.5e-234;gbkey=misc_feature;gene=gutE;inference=protein motif:PFAM:PF03612
AM286415.1	EMBL	sequence_feature	1226869	1226922	.	-	.	ID=id2048;Note=6 probable transmembrane helices predicted for YE1097 by TMHMM2.0 at aa 168-185%2C 200-219%2C 226-248%2C252-274%2C 281-303 and 318-340;gbkey=misc_feature;gene=gutE;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1226767	1226826	.	-	.	ID=id2048;Note=6 probable transmembrane helices predicted for YE1097 by TMHMM2.0 at aa 168-185%2C 200-219%2C 226-248%2C252-274%2C 281-303 and 318-340;gbkey=misc_feature;gene=gutE;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1226680	1226748	.	-	.	ID=id2048;Note=6 probable transmembrane helices predicted for YE1097 by TMHMM2.0 at aa 168-185%2C 200-219%2C 226-248%2C252-274%2C 281-303 and 318-340;gbkey=misc_feature;gene=gutE;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1226602	1226670	.	-	.	ID=id2048;Note=6 probable transmembrane helices predicted for YE1097 by TMHMM2.0 at aa 168-185%2C 200-219%2C 226-248%2C252-274%2C 281-303 and 318-340;gbkey=misc_feature;gene=gutE;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1226515	1226583	.	-	.	ID=id2048;Note=6 probable transmembrane helices predicted for YE1097 by TMHMM2.0 at aa 168-185%2C 200-219%2C 226-248%2C252-274%2C 281-303 and 318-340;gbkey=misc_feature;gene=gutE;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1226404	1226472	.	-	.	ID=id2048;Note=6 probable transmembrane helices predicted for YE1097 by TMHMM2.0 at aa 168-185%2C 200-219%2C 226-248%2C252-274%2C 281-303 and 318-340;gbkey=misc_feature;gene=gutE;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1226833	1226907	.	-	.	ID=id2049;Note=PS00107 Protein kinases ATP-binding region signature.;gbkey=misc_feature;gene=gutE;inference=protein motif:Prosite:PS00107
AM286415.1	EMBL	gene	1227459	1228007	.	-	.	ID=gene1098;Name=gutA;gbkey=Gene;gene=gutA;gene_biotype=protein_coding;locus_tag=YE1098
AM286415.1	EMBL	CDS	1227459	1228007	.	-	0	ID=cds1051;Parent=gene1098;Dbxref=EnsemblGenomes-Gn:YE1098,EnsemblGenomes-Tr:CAL11194,GOA:A1JKV6,InterPro:IPR004699,UniProtKB/TrEMBL:A1JKV6,NCBI_GP:CAL11194.1;Name=CAL11194.1;Note=Similar to Escherichia coli pts system%2Cglucitol/sorbitol-specific IIC2 component SrlA or GutA or sbl or b2702 SWALL:PTHC_ECOLI (SWALL:P56579) (187 aa) fasta scores: E(): 2e-65%2C 90.11 38d in 182 aa%2C and to Erwinia amylovora pts system%2C glucitol/sorbitol-specific IIC2 component SrlA SWALL:PTHC_ERWAM (SWALL:O32521) (182 aa) fasta scores: E(): 1.4e-64%2C 87.36 38d in 182 aa;gbkey=CDS;gene=gutA;inference=similar to sequence:UniProtKB:P56579;product=pts system%2C glucitol/sorbitol-specific iic2 component;protein_id=CAL11194.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1227480	1228004	.	-	.	ID=id2050;Note=Pfam match to entry PF03608 EII-GUT%2C PTS system enzyme II sorbitol-specific factor%2C score 470.7%2C E-value 7.8e-139;gbkey=misc_feature;gene=gutA;inference=protein motif:PFAM:PF03608
AM286415.1	EMBL	sequence_feature	1227876	1227944	.	-	.	ID=id2051;Note=3 probable transmembrane helices predicted for YE1098 by TMHMM2.0 at aa 22-44%2C 65-87 and 128-150;gbkey=misc_feature;gene=gutA;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1227747	1227815	.	-	.	ID=id2051;Note=3 probable transmembrane helices predicted for YE1098 by TMHMM2.0 at aa 22-44%2C 65-87 and 128-150;gbkey=misc_feature;gene=gutA;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1227558	1227626	.	-	.	ID=id2051;Note=3 probable transmembrane helices predicted for YE1098 by TMHMM2.0 at aa 22-44%2C 65-87 and 128-150;gbkey=misc_feature;gene=gutA;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	1227687	1227719	.	-	.	ID=id2052;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=gutA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1228386	1229276	.	-	.	ID=gene1099;Name=YE1099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1099
AM286415.1	EMBL	CDS	1228386	1229276	.	-	0	ID=cds1052;Parent=gene1099;Dbxref=EnsemblGenomes-Gn:YE1099,EnsemblGenomes-Tr:CAL11195,GOA:A1JKV8,InterPro:IPR001206,InterPro:IPR005218,InterPro:IPR016064,InterPro:IPR022433,NCBI_GP:CAL11195.1;Name=CAL11195.1;gbkey=CDS;product=putative diacylglycerol kinase;protein_id=CAL11195.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1228890	1229270	.	-	.	ID=id2053;Note=Pfam match to entry PF00781 DAGKc%2C Diacylglycerol kinase catalytic domain (presumed)%2C score 86.5%2C E-value 3.6e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00781
AM286415.1	EMBL	gene	1229759	1231162	.	-	.	ID=gene1100;Name=YE1100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1100
AM286415.1	EMBL	CDS	1229759	1231162	.	-	0	ID=cds1053;Parent=gene1100;Dbxref=EnsemblGenomes-Gn:YE1100,EnsemblGenomes-Tr:CAL11196,GOA:A1JKV9,InterPro:IPR001539,UniProtKB/TrEMBL:A1JKV9,NCBI_GP:CAL11196.1;Name=CAL11196.1;gbkey=CDS;product=putative protease;protein_id=CAL11196.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1230089	1230901	.	-	.	ID=id2054;Note=Pfam match to entry PF01136 Peptidase_U32%2CPeptidase family U32%2C score 592.5%2C E-value 1.6e-175;gbkey=misc_feature;inference=protein motif:PFAM:PF01136
AM286415.1	EMBL	sequence_feature	1230584	1230640	.	-	.	ID=id2055;Note=PS01276 Peptidase family U32 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01276
AM286415.1	EMBL	pseudogene	1231365	1231801	.	+	.	ID=gene1101;Name=YE1101;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1101;pseudo=true
AM286415.1	EMBL	CDS	1231365	1231529	.	+	0	ID=cds1054;Parent=gene1101;Dbxref=PSEUDO:CAL11197.1;Note=Similar to the very C-terminus of Vibrio cholerae hypothetical protein Vc0815 SWALL:Q9KTS3 (EMBL:AE004166) (456 aa) fasta scores: E(): 7.6e-12%2C 39 38d in 134 aa. This CDS appears to have suffered a significant deletion event which has also resulted in a framehift mutation;gbkey=CDS;inference=similar to sequence:INSDC:AE004166;product=hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1231523	1231801	.	+	0	ID=cds1054;Parent=gene1101;Dbxref=PSEUDO:CAL11197.1;Note=Similar to the very C-terminus of Vibrio cholerae hypothetical protein Vc0815 SWALL:Q9KTS3 (EMBL:AE004166) (456 aa) fasta scores: E(): 7.6e-12%2C 39 38d in 134 aa. This CDS appears to have suffered a significant deletion event which has also resulted in a framehift mutation;gbkey=CDS;inference=similar to sequence:INSDC:AE004166;product=hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	1231798	1232136	.	+	.	ID=gene1102;Name=YE1102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1102
AM286415.1	EMBL	CDS	1231798	1232136	.	+	0	ID=cds1055;Parent=gene1102;Dbxref=EnsemblGenomes-Gn:YE1102,EnsemblGenomes-Tr:CAL11198,GOA:A1JKW4,InterPro:IPR001387,InterPro:IPR010982,UniProtKB/TrEMBL:A1JKW4,NCBI_GP:CAL11198.1;Name=CAL11198.1;Note=Similar in part to Vibrio cholerae transcriptional regulator%2C putative Vc0814 SWALL:Q9KTS4 (EMBL:AE004166) (159 aa) fasta scores: E(): 9.5e-10%2C 38.83 38d in 103 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004166;product=putative DNA-binding protein;protein_id=CAL11198.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1231891	1232058	.	+	.	ID=id2056;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 39.5%2C E-value 4.9e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	1231921	1231986	.	+	.	ID=id2057;Note=Predicted helix-turn-helix motif with score 1418.000%2C SD 4.02 at aa 46-67%2C sequence MSQEEFSSLVKISRRTLSDIET;gbkey=misc_feature
AM286415.1	EMBL	gene	1232215	1232553	.	-	.	ID=gene1103;Name=YE1103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1103
AM286415.1	EMBL	CDS	1232215	1232553	.	-	0	ID=cds1056;Parent=gene1103;Dbxref=EnsemblGenomes-Gn:YE1103,EnsemblGenomes-Tr:CAL11199,InterPro:IPR010879,UniProtKB/TrEMBL:A1JKW5,NCBI_GP:CAL11199.1;Name=CAL11199.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11199.1;transl_table=11
AM286415.1	EMBL	gene	1232632	1233351	.	-	.	ID=gene1104;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=YE1104
AM286415.1	EMBL	CDS	1232632	1233351	.	-	0	ID=cds1057;Parent=gene1104;Dbxref=EnsemblGenomes-Gn:YE1104,EnsemblGenomes-Tr:CAL11200,GOA:A1JKW6,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB/TrEMBL:A1JKW6,NCBI_GP:CAL11200.1;Name=CAL11200.1;gbkey=CDS;gene=baeR;product=two-component system response regulator;protein_id=CAL11200.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1232635	1232646	.	-	.	ID=id2058;Note=PS00294 Prenyl group binding site (CAAX box).;gbkey=misc_feature;gene=baeR;inference=protein motif:Prosite:PS00294
AM286415.1	EMBL	sequence_feature	1232668	1232886	.	-	.	ID=id2059;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 115.2%2C E-value 8.2e-32;gbkey=misc_feature;gene=baeR;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	sequence_feature	1232962	1233318	.	-	.	ID=id2060;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 114.3%2C E-value 1.5e-31;gbkey=misc_feature;gene=baeR;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	1233360	1234736	.	-	.	ID=gene1105;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=YE1105
AM286415.1	EMBL	CDS	1233360	1234736	.	-	0	ID=cds1058;Parent=gene1105;Dbxref=EnsemblGenomes-Gn:YE1105,EnsemblGenomes-Tr:CAL11201,GOA:A1JKW7,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB/TrEMBL:A1JKW7,NCBI_GP:CAL11201.1;Name=CAL11201.1;gbkey=CDS;gene=baeS;product=two-component system%2C sensor kinase;protein_id=CAL11201.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1233375	1233710	.	-	.	ID=id2061;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 130.4%2C E-value 2.2e-36;gbkey=misc_feature;gene=baeS;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	1233843	1234037	.	-	.	ID=id2062;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 62.7%2C E-value 5.3e-16;gbkey=misc_feature;gene=baeS;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	1234047	1234256	.	-	.	ID=id2063;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 77.3%2C E-value 2e-20;gbkey=misc_feature;gene=baeS;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	1234641	1234709	.	-	.	ID=id2064;Note=2 probable transmembrane helices predicted for YE1105 by TMHMM2.0 at aa 10-32 and 161-180;gbkey=misc_feature;gene=baeS;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1234197	1234256	.	-	.	ID=id2064;Note=2 probable transmembrane helices predicted for YE1105 by TMHMM2.0 at aa 10-32 and 161-180;gbkey=misc_feature;gene=baeS;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	1234753	1236132	.	-	.	ID=gene1106;Name=yegB;gbkey=Gene;gene=yegB;gene_biotype=protein_coding;locus_tag=YE1106
AM286415.1	EMBL	CDS	1234753	1236132	.	-	0	ID=cds1059;Parent=gene1106;Dbxref=EnsemblGenomes-Gn:YE1106,EnsemblGenomes-Tr:CAL11202,GOA:A1JKW8,InterPro:IPR001411,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,InterPro:IPR023721,NCBI_GP:CAL11202.1;Name=CAL11202.1;gbkey=CDS;gene=yegB;product=putative membrane protein;protein_id=CAL11202.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1235968	1236027	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1235881	1235949	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1235803	1235871	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1235701	1235769	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1235620	1235688	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1235533	1235586	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1235446	1235505	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1235320	1235388	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1235239	1235307	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1235110	1235178	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1234921	1234989	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1234825	1234884	.	-	.	ID=id2065;Note=12 probable transmembrane helices predicted for YE1106 by TMHMM2.0 at aa 36-55%2C 62-84%2C 88-110%2C 122-144%2C149-171%2C 183-200%2C 210-229%2C 249-271%2C 276-298%2C 319-341%2C382-404 and 417-436;gbkey=misc_feature;gene=yegB;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	1235842	1235979	.	-	.	ID=id2066;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 18.3%2C E-value 1e-05;gbkey=misc_feature;gene=yegB;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	1236489	1239563	.	-	.	ID=gene1107;Name=yegO;gbkey=Gene;gene=yegO;gene_biotype=protein_coding;locus_tag=YE1107
AM286415.1	EMBL	CDS	1236489	1239563	.	-	0	ID=cds1060;Parent=gene1107;Dbxref=EnsemblGenomes-Gn:YE1107,EnsemblGenomes-Tr:CAL11203,GOA:A1JKW9,InterPro:IPR001036,InterPro:IPR023931,InterPro:IPR027463,NCBI_GP:CAL11203.1;Name=CAL11203.1;gbkey=CDS;gene=yegO;product=AcrB/AcrD/AcrF family membrane protein;protein_id=CAL11203.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1236537	1239557	.	-	.	ID=id2067;Note=Pfam match to entry PF00873 ACR_tran%2CAcrB/AcrD/AcrF family%2C score 1462.3%2C E-value 0;gbkey=misc_feature;gene=yegO;inference=protein motif:PFAM:PF00873
AM286415.1	EMBL	sequence_feature	1239462	1239530	.	-	.	ID=id2068;Note=10 probable transmembrane helices predicted for YE1107 by TMHMM2.0 at aa 12-34%2C 336-353%2C 360-382%2C 431-450%2C463-485%2C 528-547%2C 853-875%2C 895-917%2C 948-970 and 985-1007;gbkey=misc_feature;gene=yegO;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1238505	1238558	.	-	.	ID=id2068;Note=10 probable transmembrane helices predicted for YE1107 by TMHMM2.0 at aa 12-34%2C 336-353%2C 360-382%2C 431-450%2C463-485%2C 528-547%2C 853-875%2C 895-917%2C 948-970 and 985-1007;gbkey=misc_feature;gene=yegO;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1238418	1238486	.	-	.	ID=id2068;Note=10 probable transmembrane helices predicted for YE1107 by TMHMM2.0 at aa 12-34%2C 336-353%2C 360-382%2C 431-450%2C463-485%2C 528-547%2C 853-875%2C 895-917%2C 948-970 and 985-1007;gbkey=misc_feature;gene=yegO;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1238214	1238273	.	-	.	ID=id2068;Note=10 probable transmembrane helices predicted for YE1107 by TMHMM2.0 at aa 12-34%2C 336-353%2C 360-382%2C 431-450%2C463-485%2C 528-547%2C 853-875%2C 895-917%2C 948-970 and 985-1007;gbkey=misc_feature;gene=yegO;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1238109	1238177	.	-	.	ID=id2068;Note=10 probable transmembrane helices predicted for YE1107 by TMHMM2.0 at aa 12-34%2C 336-353%2C 360-382%2C 431-450%2C463-485%2C 528-547%2C 853-875%2C 895-917%2C 948-970 and 985-1007;gbkey=misc_feature;gene=yegO;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1237923	1237982	.	-	.	ID=id2068;Note=10 probable transmembrane helices predicted for YE1107 by TMHMM2.0 at aa 12-34%2C 336-353%2C 360-382%2C 431-450%2C463-485%2C 528-547%2C 853-875%2C 895-917%2C 948-970 and 985-1007;gbkey=misc_feature;gene=yegO;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1236939	1237007	.	-	.	ID=id2068;Note=10 probable transmembrane helices predicted for YE1107 by TMHMM2.0 at aa 12-34%2C 336-353%2C 360-382%2C 431-450%2C463-485%2C 528-547%2C 853-875%2C 895-917%2C 948-970 and 985-1007;gbkey=misc_feature;gene=yegO;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1236813	1236881	.	-	.	ID=id2068;Note=10 probable transmembrane helices predicted for YE1107 by TMHMM2.0 at aa 12-34%2C 336-353%2C 360-382%2C 431-450%2C463-485%2C 528-547%2C 853-875%2C 895-917%2C 948-970 and 985-1007;gbkey=misc_feature;gene=yegO;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1236654	1236722	.	-	.	ID=id2068;Note=10 probable transmembrane helices predicted for YE1107 by TMHMM2.0 at aa 12-34%2C 336-353%2C 360-382%2C 431-450%2C463-485%2C 528-547%2C 853-875%2C 895-917%2C 948-970 and 985-1007;gbkey=misc_feature;gene=yegO;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1236543	1236611	.	-	.	ID=id2068;Note=10 probable transmembrane helices predicted for YE1107 by TMHMM2.0 at aa 12-34%2C 336-353%2C 360-382%2C 431-450%2C463-485%2C 528-547%2C 853-875%2C 895-917%2C 948-970 and 985-1007;gbkey=misc_feature;gene=yegO;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	1239560	1242703	.	-	.	ID=gene1108;Name=yegN;gbkey=Gene;gene=yegN;gene_biotype=protein_coding;locus_tag=YE1108
AM286415.1	EMBL	CDS	1239560	1242703	.	-	0	ID=cds1061;Parent=gene1108;Dbxref=EnsemblGenomes-Gn:YE1108,EnsemblGenomes-Tr:CAL11204,GOA:A1JKX0,InterPro:IPR001036,InterPro:IPR022831,InterPro:IPR027463,UniProtKB/TrEMBL:A1JKX0,NCBI_GP:CAL11204.1;Name=CAL11204.1;gbkey=CDS;gene=yegN;product=AcrB/AcrD/AcrF family membrane protein;protein_id=CAL11204.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1239635	1242670	.	-	.	ID=id2069;Note=Pfam match to entry PF00873 ACR_tran%2CAcrB/AcrD/AcrF family%2C score 1437.7%2C E-value 0;gbkey=misc_feature;gene=yegN;inference=protein motif:PFAM:PF00873
AM286415.1	EMBL	sequence_feature	1242593	1242661	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1241609	1241677	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1241531	1241599	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1241444	1241512	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1241318	1241386	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1241216	1241284	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1241033	1241101	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1240037	1240105	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1239911	1239979	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1239734	1239802	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1239638	1239706	.	-	.	ID=id2070;Note=11 probable transmembrane helices predicted for YE1108 by TMHMM2.0 at aa 15-37%2C 343-365%2C 369-391%2C 398-420%2C440-462%2C 474-496%2C 535-557%2C 867-889%2C 909-931%2C 968-990 and 1000-1022;gbkey=misc_feature;gene=yegN;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	1240124	1240162	.	-	.	ID=id2071;Note=PS01331 Thymidylate kinase signature.;gbkey=misc_feature;gene=yegN;inference=protein motif:Prosite:PS01331
AM286415.1	EMBL	gene	1242703	1244034	.	-	.	ID=gene1109;Name=yegM;gbkey=Gene;gene=yegM;gene_biotype=protein_coding;locus_tag=YE1109
AM286415.1	EMBL	CDS	1242703	1244034	.	-	0	ID=cds1062;Parent=gene1109;Dbxref=EnsemblGenomes-Gn:YE1109,EnsemblGenomes-Tr:CAL11205,GOA:A1JKX1,InterPro:IPR006143,InterPro:IPR022824,NCBI_GP:CAL11205.1;Name=CAL11205.1;gbkey=CDS;gene=yegM;product=putitive HlyD family secretion protein;protein_id=CAL11205.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1242889	1243773	.	-	.	ID=id2072;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 81.1%2C E-value 1.5e-21;gbkey=misc_feature;gene=yegM;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	sequence_feature	1243942	1244001	.	-	.	ID=id2073;Note=1 probable transmembrane helix predicted for YE1109 by TMHMM2.0 at aa 12-31;gbkey=misc_feature;gene=yegM;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1244217	1244483	.	-	.	ID=gene1110;Name=YE1110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1110
AM286415.1	EMBL	CDS	1244217	1244483	.	-	0	ID=cds1063;Parent=gene1110;Dbxref=EnsemblGenomes-Gn:YE1110,EnsemblGenomes-Tr:CAL11206,InterPro:IPR004386,InterPro:IPR007712,UniProtKB/TrEMBL:A1JKX2,NCBI_GP:CAL11206.1;Name=CAL11206.1;Note=Similar to Vibrio cholerae hypothetical protein Vca0323 SWALL:Q9KML4 (EMBL:AE004370) (98 aa) fasta scores: E(): 1.7e-09%2C 40.44 38d in 89 aa and to Zymomonas mobilis hypothetical 10.4 kDa protein SWALL:Q9REP2 (EMBL:AF213822) (89 aa) fasta scores: E(): 6.3e-08%2C 38.71 id in 93 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF213822;product=conserved hypothetical protein;protein_id=CAL11206.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1244220	1244483	.	-	.	ID=id2074;Note=Pfam match to entry PF03890 DUF332%2C Domain of unknown function (DUF332)%2C score 80.8%2C E-value 1.9e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF03890
AM286415.1	EMBL	gene	1244653	1245684	.	-	.	ID=gene1111;Name=YE1111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1111
AM286415.1	EMBL	CDS	1244653	1245684	.	-	0	ID=cds1064;Parent=gene1111;Dbxref=EnsemblGenomes-Gn:YE1111,EnsemblGenomes-Tr:CAL11207,GOA:A1JKX3,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JKX3,NCBI_GP:CAL11207.1;Name=CAL11207.1;Note=Similar in the C-terminus to several fimbrial proteins including: Photorhabdus luminescens PhfB SWALL:Q9AI15 (EMBL:AF288077) (337 aa) fasta scores: E(): 4.8e-07%2C 29.83 38d in 248 aa and Salmonella typhimurium fimbrial subunit BcfF or Stm0026 SWALL:Q9X608 (EMBL:AF130422) (172 aa) fasta scores: E(): 7.2e-05%2C32.41 38d in 145 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF288077;product=putative fimbrial subunit;protein_id=CAL11207.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1244656	1245093	.	-	.	ID=id2075;Note=Pfam match to entry PF00419 Fimbrial%2C Fimbrial protein%2C score 34.8%2C E-value 7.9e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00419
AM286415.1	EMBL	sequence_feature	1245568	1245636	.	-	.	ID=id2076;Note=1 probable transmembrane helix predicted for YE1111 by TMHMM2.0 at aa 17-39;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1245760	1248333	.	-	.	ID=gene1112;Name=YE1112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1112
AM286415.1	EMBL	CDS	1245760	1248333	.	-	0	ID=cds1065;Parent=gene1112;Dbxref=EnsemblGenomes-Gn:YE1112,EnsemblGenomes-Tr:CAL11208,GOA:A1JKX5,InterPro:IPR000015,InterPro:IPR018030,InterPro:IPR025885,InterPro:IPR025949,UniProtKB/TrEMBL:A1JKX5,NCBI_GP:CAL11208.1;Name=CAL11208.1;Note=Similar to Salmonella typhimurium outer membrane usher protein LpfC precursor or stm3638 SWALL:LPFC_SALTY (SWALL:P43662) (842 aa) fasta scores: E(): 8.1e-133%2C47.13 38d in 855 aa and to Escherichia coli O157:H7 putative outer membrane protein YraJ or Z4500 or ecs4022 SWALL:Q8XAB2 (EMBL:AE005543) (838 aa) fasta scores: E(): 1.7e-128%2C 44.98 38d in 858 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P43662;product=outer membrane usher protein;protein_id=CAL11208.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1245817	1248174	.	-	.	ID=id2077;Note=Pfam match to entry PF00577 Usher%2C Fimbrial Usher protein%2C score 1204.4%2C E-value 0;gbkey=misc_feature;inference=protein motif:PFAM:PF00577
AM286415.1	EMBL	sequence_feature	1247317	1247349	.	-	.	ID=id2078;Note=PS01151 Fimbrial biogenesis outer membrane usher protein signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01151
AM286415.1	EMBL	gene	1248296	1248976	.	-	.	ID=gene1113;Name=YE1113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1113
AM286415.1	EMBL	CDS	1248296	1248976	.	-	0	ID=cds1066;Parent=gene1113;Dbxref=EnsemblGenomes-Gn:YE1113,EnsemblGenomes-Tr:CAL11209,GOA:A1JKX7,InterPro:IPR001829,InterPro:IPR008962,InterPro:IPR016147,InterPro:IPR016148,InterPro:IPR018046,UniProtKB/TrEMBL:A1JKX7,NCBI_GP:CAL11209.1;Name=CAL11209.1;Note=Similar to Salmonella typhimurium chaperone protein LpfB precursor or Stm3639 SWALL:LPFB_SALTY (SWALL:P43661) (232 aa) fasta scores: E(): 7.8e-35%2C 46.9 38d in 226 aa and to Escherichia coli O157:H7 putative fimbrial chaperone Z4969 or Ecs4430 SWALL:Q8X5K6 (EMBL:AE005581) (232 aa) fasta scores: E(): 3.2e-36%2C 48.67 38d in 226 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P43661;product=putative fimbrial chaperone protein;protein_id=CAL11209.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1248308	1248541	.	-	.	ID=id2079;Note=Pfam match to entry PF02753 pili_assembly_C%2CGram-negative pili assembly chaperone%2C C-terminal domain %2Cscore 83.4%2C E-value 3e-22;gbkey=misc_feature;inference=protein motif:PFAM:PF02753
AM286415.1	EMBL	sequence_feature	1248551	1248910	.	-	.	ID=id2080;Note=Pfam match to entry PF00345 pili_assembly%2CGram-negative pili assembly chaperone%2C N-terminal domain %2Cscore 214.3%2C E-value 1.2e-61;gbkey=misc_feature;inference=protein motif:PFAM:PF00345
AM286415.1	EMBL	sequence_feature	1248632	1248685	.	-	.	ID=id2081;Note=PS00635 Gram-negative pili assembly chaperone signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00635
AM286415.1	EMBL	sequence_feature	1248890	1248958	.	-	.	ID=id2082;Note=probable transmembrane helices predicted for YE1113 by TMHMM2.0;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1249118	1249645	.	-	.	ID=gene1114;Name=YE1114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1114
AM286415.1	EMBL	CDS	1249118	1249645	.	-	0	ID=cds1067;Parent=gene1114;Dbxref=EnsemblGenomes-Gn:YE1114,EnsemblGenomes-Tr:CAL11210,GOA:A1JKX9,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JKX9,NCBI_GP:CAL11210.1;Name=CAL11210.1;Note=Similar to Salmonella typhimurium long polar fimbria protein A precursor LpfA or Stm3640 SWALL:LPFA_SALTY (SWALL:P43660) (178 aa) fasta scores: E(): 1.3e-10%2C 32.43 38d in 185 aa%2C Erwinia aphidicola EafA SWALL:Q9WXD4 (EMBL:AB019396) (175 aa) fasta scores: E(): 1.9e-05%2C 29.94 38d in 177 aa%2C and to Escherichia coli FimG protein or b4319 SWALL:FIMG_ECOLI (SWALL:P08190) (167 aa) fasta scores: E(): 0.00067%2C 23.25 38d in 172 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P43660;product=putative fimbrial protein;protein_id=CAL11210.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1249121	1249567	.	-	.	ID=id2083;Note=Pfam match to entry PF00419 Fimbrial%2C Fimbrial protein%2C score 45.1%2C E-value 9.9e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00419
AM286415.1	EMBL	repeat_region	1250317	1250442	.	-	.	ID=id2084;Note=gttgcggttgatagtcacaggattatctggttcggttgtta;gbkey=repeat_region
AM286415.1	EMBL	gene	1250466	1251818	.	-	.	ID=gene1115;Name=YE1115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1115
AM286415.1	EMBL	CDS	1250466	1251818	.	-	0	ID=cds1068;Parent=gene1115;Dbxref=EnsemblGenomes-Gn:YE1115,EnsemblGenomes-Tr:CAL11211,InterPro:IPR013126,InterPro:IPR018181,UniProtKB/TrEMBL:A1JKY2,NCBI_GP:CAL11211.1;Name=CAL11211.1;gbkey=CDS;product=putative heat shock protein;protein_id=CAL11211.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1251141	1251197	.	-	.	ID=id2085;Note=Pfam match to entry PF00012 HSP70%2C Hsp70 protein %2Cscore 17.0%2C E-value 1.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00012
AM286415.1	EMBL	sequence_feature	1251141	1251182	.	-	.	ID=id2086;Note=PS00329 Heat shock hsp70 proteins family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00329
AM286415.1	EMBL	gene	1251912	1255316	.	-	.	ID=gene1116;Name=YE1116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1116
AM286415.1	EMBL	CDS	1251912	1255316	.	-	0	ID=cds1069;Parent=gene1116;Dbxref=EnsemblGenomes-Gn:YE1116,EnsemblGenomes-Tr:CAL11212,GOA:A1JKY3,InterPro:IPR000014,InterPro:IPR000160,InterPro:IPR000700,InterPro:IPR001610,InterPro:IPR001633,InterPro:IPR007895,InterPro:IPR013655,InterPro:IPR029787,UniProtKB/TrEMBL:A1JKY3,NCBI_GP:CAL11212.1;Name=CAL11212.1;Note=Similar to Escherichia coli hypothetical protein YegE or b2067 SWALL:YEGE_ECOLI (SWALL:P38097) (1105 aa) fasta scores: E(): 1.9e-171%2C 44.72 38d in 1100 aa%2CEscherichia coli O157:H7 partial putative sensor kinase z3236 SWALL:Q8X7K1 (EMBL:AE005433) (935 aa) fasta scores: E(): 5.3e-148%2C 45.75 38d in 942 aa%2C and to Pseudomonas aeruginosa hypothetical protein Pa1181 SWALL:Q9I4F7 (EMBL:AE004548) (1120 aa) fasta scores: E(): 1e-144%2C37.71 38d in 1111 aa. Note the N-terminal region of this protein contains membrane spanning domains and the C-terminal portion contains many motifs that are commonly present within the sensor domains of signalling proteins;gbkey=CDS;inference=similar to sequence:UniProtKB:P38097;product=putative inner membrane protein;protein_id=CAL11212.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1251945	1252682	.	-	.	ID=id2087;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score -47.9%2C E-value 1.2e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	sequence_feature	1252728	1253213	.	-	.	ID=id2088;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 194.2%2C E-value 1.3e-55;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	1253232	1253360	.	-	.	ID=id2089;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 26.0%2C E-value 5.8e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1253484	1253591	.	-	.	ID=id2090;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 12.9%2C E-value 0.004;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	1253625	1253753	.	-	.	ID=id2091;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 29.5%2C E-value 5.2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1254006	1254134	.	-	.	ID=id2092;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 44.0%2C E-value 2.2e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1254156	1254353	.	-	.	ID=id2093;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 24.6%2C E-value 2.2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	1255155	1255214	.	-	.	ID=id2094;Note=8 probable transmembrane helices predicted for YE1116 by TMHMM2.0 at aa 35-54%2C 61-80%2C 95-117%2C 138-160%2C175-197%2C 218-240%2C 255-277 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	1255077	1255136	.	-	.	ID=id2094;Note=8 probable transmembrane helices predicted for YE1116 by TMHMM2.0 at aa 35-54%2C 61-80%2C 95-117%2C 138-160%2C175-197%2C 218-240%2C 255-277 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	1254966	1255034	.	-	.	ID=id2094;Note=8 probable transmembrane helices predicted for YE1116 by TMHMM2.0 at aa 35-54%2C 61-80%2C 95-117%2C 138-160%2C175-197%2C 218-240%2C 255-277 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	1254837	1254905	.	-	.	ID=id2094;Note=8 probable transmembrane helices predicted for YE1116 by TMHMM2.0 at aa 35-54%2C 61-80%2C 95-117%2C 138-160%2C175-197%2C 218-240%2C 255-277 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	1254726	1254794	.	-	.	ID=id2094;Note=8 probable transmembrane helices predicted for YE1116 by TMHMM2.0 at aa 35-54%2C 61-80%2C 95-117%2C 138-160%2C175-197%2C 218-240%2C 255-277 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	1254597	1254665	.	-	.	ID=id2094;Note=8 probable transmembrane helices predicted for YE1116 by TMHMM2.0 at aa 35-54%2C 61-80%2C 95-117%2C 138-160%2C175-197%2C 218-240%2C 255-277 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	1254486	1254554	.	-	.	ID=id2094;Note=8 probable transmembrane helices predicted for YE1116 by TMHMM2.0 at aa 35-54%2C 61-80%2C 95-117%2C 138-160%2C175-197%2C 218-240%2C 255-277 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	1254399	1254467	.	-	.	ID=id2094;Note=8 probable transmembrane helices predicted for YE1116 by TMHMM2.0 at aa 35-54%2C 61-80%2C 95-117%2C 138-160%2C175-197%2C 218-240%2C 255-277 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	1255568	1257043	.	-	.	ID=gene1117;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=YE1117
AM286415.1	EMBL	CDS	1255568	1257043	.	-	0	ID=cds1070;Parent=gene1117;Dbxref=EnsemblGenomes-Gn:YE1117,EnsemblGenomes-Tr:CAL11213,GOA:A1JKY5,InterPro:IPR000644,InterPro:IPR006667,InterPro:IPR006668,InterPro:IPR006669,UniProtKB/TrEMBL:A1JKY5,NCBI_GP:CAL11213.1;Name=CAL11213.1;gbkey=CDS;gene=mgtE;product=putative divalent cation transport protein;protein_id=CAL11213.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1255772	1255840	.	-	.	ID=id2095;Note=3 probable transmembrane helices predicted for YE1117 by TMHMM2.0 at aa 402-424%2C 431-453 and 468-490;gbkey=misc_feature;gene=mgtE;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1255685	1255753	.	-	.	ID=id2095;Note=3 probable transmembrane helices predicted for YE1117 by TMHMM2.0 at aa 402-424%2C 431-453 and 468-490;gbkey=misc_feature;gene=mgtE;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1255574	1255642	.	-	.	ID=id2095;Note=3 probable transmembrane helices predicted for YE1117 by TMHMM2.0 at aa 402-424%2C 431-453 and 468-490;gbkey=misc_feature;gene=mgtE;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	1255586	1255963	.	-	.	ID=id2096;Note=Pfam match to entry PF01769 MgtE%2C Divalent cation transporter%2C score 59.4%2C E-value 5.2e-15;gbkey=misc_feature;gene=mgtE;inference=protein motif:PFAM:PF01769
AM286415.1	EMBL	sequence_feature	1256153	1256314	.	-	.	ID=id2097;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 35.2%2C E-value 9.5e-08;gbkey=misc_feature;gene=mgtE;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1256330	1256506	.	-	.	ID=id2098;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 10.7%2C E-value 0.14;gbkey=misc_feature;gene=mgtE;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1256510	1256896	.	-	.	ID=id2099;Note=Pfam match to entry PF03448 MgtE_N%2C MgtE intracellular domain%2C score 54.3%2C E-value 1.8e-13;gbkey=misc_feature;gene=mgtE;inference=protein motif:PFAM:PF03448
AM286415.1	EMBL	gene	1257091	1257282	.	-	.	ID=gene1118;Name=yfgG;gbkey=Gene;gene=yfgG;gene_biotype=protein_coding;locus_tag=YE1118
AM286415.1	EMBL	CDS	1257091	1257282	.	-	0	ID=cds1071;Parent=gene1118;Dbxref=EnsemblGenomes-Gn:YE1118,EnsemblGenomes-Tr:CAL11214,InterPro:IPR022576,UniProtKB/TrEMBL:A1JKY6,NCBI_GP:CAL11214.1;Name=CAL11214.1;gbkey=CDS;gene=yfgG;product=putative exported protein;protein_id=CAL11214.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1257181	1257249	.	-	.	ID=id2100;Note=1 probable transmembrane helix predicted for YE1118 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;gene=yfgG;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1257548	1259038	.	-	.	ID=gene1119;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=YE1119
AM286415.1	EMBL	CDS	1257548	1259038	.	-	0	ID=cds1072;Parent=gene1119;Dbxref=EnsemblGenomes-Gn:YE1119,EnsemblGenomes-Tr:CAL11215,InterPro:IPR003695,UniProtKB/TrEMBL:A1JKY7,NCBI_GP:CAL11215.1;Name=CAL11215.1;gbkey=CDS;gene=ppx;product=putative exopolyphosphatase;protein_id=CAL11215.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1258097	1258162	.	-	.	ID=id2101;Note=Predicted helix-turn-helix motif with score 1340.000%2C SD 3.75 at aa 293-314%2C sequence RTAKSLAEHYNIDREQARRVLE;gbkey=misc_feature;gene=ppx
AM286415.1	EMBL	sequence_feature	1258184	1259035	.	-	.	ID=id2102;Note=Pfam match to entry PF02541 Ppx-GppA%2C Ppx/GppA phosphatase family%2C score 447.0%2C E-value 1.1e-131;gbkey=misc_feature;gene=ppx;inference=protein motif:PFAM:PF02541
AM286415.1	EMBL	gene	1259121	1261190	.	-	.	ID=gene1120;Name=ppk;gbkey=Gene;gene=ppk;gene_biotype=protein_coding;locus_tag=YE1120
AM286415.1	EMBL	CDS	1259121	1261190	.	-	0	ID=cds1073;Parent=gene1120;Dbxref=EnsemblGenomes-Gn:YE1120,EnsemblGenomes-Tr:CAL11216,GOA:A1JKY8,InterPro:IPR001736,InterPro:IPR003414,InterPro:IPR024953,InterPro:IPR025198,InterPro:IPR025200,UniProtKB/TrEMBL:A1JKY8,NCBI_GP:CAL11216.1;Name=CAL11216.1;gbkey=CDS;gene=ppk;product=polyphosphate kinase;protein_id=CAL11216.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1259148	1261187	.	-	.	ID=id2103;Note=Pfam match to entry PF02503 PP_kinase%2CPolyphosphate kinase%2C score 1432.3%2C E-value 0;gbkey=misc_feature;gene=ppk;inference=protein motif:PFAM:PF02503
AM286415.1	EMBL	repeat_region	1261871	1263077	.	-	.	ID=id2104;Note=Insertion sequence element IS1400;gbkey=repeat_region
AM286415.1	EMBL	sequence_feature	1261871	1261882	.	-	.	ID=id2105;Note=putative inverted repeats for IS1400;gbkey=misc_feature
AM286415.1	EMBL	gene	1261887	1262681	.	-	.	ID=gene1121;Name=trp1400B;gbkey=Gene;gene=trp1400B;gene_biotype=protein_coding;locus_tag=YE1122
AM286415.1	EMBL	CDS	1261887	1262681	.	-	0	ID=cds1074;Parent=gene1121;Dbxref=EnsemblGenomes-Gn:YE1122,EnsemblGenomes-Tr:CAL11217,GOA:A1JKZ0,InterPro:IPR001584,InterPro:IPR012337,InterPro:IPR025948,UniProtKB/TrEMBL:A1JKZ0,NCBI_GP:CAL11217.1;Name=CAL11217.1;Note=Previously sequenced as Yersinia enterocolitica IS1400 transposase B Trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 6.8e-120%2C 98.98 38d in 264 aa. Also similar to many others e.g. Yersinia pestis putative transposase Ypcd1.94 SWALL:Q9RI05 (EMBL:AL117189) (269 aa) fasta scores: E(): 6.1e-38%2C 44.444 38d in 252 aa. Note the differing predicted start codons for this CDS compared with that previously published.;gbkey=CDS;gene=trp1400B;inference=similar to sequence:INSDC:AL117189;product=IS1400 transposase B;protein_id=CAL11217.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1261929	1262405	.	-	.	ID=id2106;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 133.9%2C E-value 1.9e-37;gbkey=misc_feature;gene=trp1400B;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	1262732	1263022	.	-	.	ID=gene1122;Name=trp1400A;gbkey=Gene;gene=trp1400A;gene_biotype=protein_coding;locus_tag=YE1123
AM286415.1	EMBL	CDS	1262732	1263022	.	-	0	ID=cds1075;Parent=gene1122;Dbxref=EnsemblGenomes-Gn:YE1123,EnsemblGenomes-Tr:CAL11218,GOA:A1JKZ2,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JKZ2,NCBI_GP:CAL11218.1;Name=CAL11218.1;gbkey=CDS;gene=trp1400A;product=IS1400 transposase A;protein_id=CAL11218.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1262735	1262989	.	-	.	ID=id2107;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 117.5%2C E-value 1.7e-32;gbkey=misc_feature;gene=trp1400A;inference=protein motif:PFAM:PF01527
AM286415.1	EMBL	sequence_feature	1262870	1262935	.	-	.	ID=id2108;Note=Predicted helix-turn-helix motif with score 1103.000%2C SD 2.94 at aa 30-51%2C sequence RTVKDVCREAAISEASYYNWKA;gbkey=misc_feature;gene=trp1400A
AM286415.1	EMBL	repeat_region	1263066	1263077	.	+	.	ID=id2109;Note=putative inverted repeats for IS1400;gbkey=repeat_region
AM286415.1	EMBL	gene	1263965	1264390	.	+	.	ID=gene1123;Name=YE1123A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1123A
AM286415.1	EMBL	CDS	1263965	1264390	.	+	0	ID=cds1076;Parent=gene1123;Dbxref=EnsemblGenomes-Gn:YE1123A,EnsemblGenomes-Tr:CAL11219,GOA:A1JKZ3,InterPro:IPR008992,InterPro:IPR020063,UniProtKB/TrEMBL:A1JKZ3,NCBI_GP:CAL11219.1;Name=CAL11219.1;Note=Similar to Salmonella typhi hypothetical periplasmic protein Sty1364 SWALL:Q8Z7B8 (EMBL:AL627270) (141 aa) fasta scores: E(): 6.3e-30%2C 59.25 38d in 135 aa and in part this protein is weakly similar to Bordetella pertussis pertussis toxin subunit 3 precursor PtxC SWALL:TOX3_BORPE (SWALL:P04979) (227 aa) fasta scores: E(): 0.94%2C 22.88 38d in 118 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P04979;product=putative exported protein;protein_id=CAL11219.1;transl_table=11
AM286415.1	EMBL	gene	1264625	1265170	.	-	.	ID=gene1124;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=YE1124
AM286415.1	EMBL	CDS	1264625	1265170	.	-	0	ID=cds1077;Parent=gene1124;Dbxref=EnsemblGenomes-Gn:YE1124,EnsemblGenomes-Tr:CAL11220,GOA:A1JKZ4,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JKZ4,NCBI_GP:CAL11220.1;Name=CAL11220.1;gbkey=CDS;gene=speG;product=spermidine acetyltransferase;protein_id=CAL11220.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1264748	1264993	.	-	.	ID=id2110;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 70.0%2C E-value 3.2e-18;gbkey=misc_feature;gene=speG;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	1265306	1265944	.	-	.	ID=gene1125;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=YE1125
AM286415.1	EMBL	CDS	1265306	1265944	.	-	0	ID=cds1078;Parent=gene1125;Dbxref=EnsemblGenomes-Gn:YE1125,EnsemblGenomes-Tr:CAL11221,GOA:A1JKZ6,InterPro:IPR001555,InterPro:IPR002376,InterPro:IPR004607,UniProtKB/TrEMBL:A1JKZ6,NCBI_GP:CAL11221.1;Name=CAL11221.1;gbkey=CDS;gene=purN;product=putative phosphoribosylglycinamide formyltransferase;protein_id=CAL11221.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1265399	1265941	.	-	.	ID=id2111;Note=Pfam match to entry PF00551 formyl_transf%2C Formyl transferase%2C score 305.9%2C E-value 3.2e-89;gbkey=misc_feature;gene=purN;inference=protein motif:PFAM:PF00551
AM286415.1	EMBL	sequence_feature	1265474	1265545	.	-	.	ID=id2112;Note=PS00373 Phosphoribosylglycinamide formyltransferase active site.;gbkey=misc_feature;gene=purN;inference=protein motif:Prosite:PS00373
AM286415.1	EMBL	gene	1266236	1267279	.	-	.	ID=gene1126;Name=purI;gbkey=Gene;gene=purI;gene_biotype=protein_coding;gene_synonym=purM;locus_tag=YE1127
AM286415.1	EMBL	CDS	1266236	1267279	.	-	0	ID=cds1079;Parent=gene1126;Dbxref=EnsemblGenomes-Gn:YE1127,EnsemblGenomes-Tr:CAL11222,GOA:A1JKZ7,InterPro:IPR000728,InterPro:IPR004733,InterPro:IPR010918,InterPro:IPR016188,NCBI_GP:CAL11222.1;Name=CAL11222.1;gbkey=CDS;gene=purI;product=putative phosphoribosylaminoimidazole synthetase;protein_id=CAL11222.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1266248	1266754	.	-	.	ID=id2113;Note=Pfam match to entry PF02769 AIRS_C%2C AIR synthase related protein%2C C-terminal domain%2C score 184.5%2C E-value 1.1e-52;gbkey=misc_feature;gene=purI;inference=protein motif:PFAM:PF02769
AM286415.1	EMBL	sequence_feature	1266785	1267267	.	-	.	ID=id2114;Note=Pfam match to entry PF00586 AIRS%2C AIR synthase related protein%2C N-terminal domain%2C score 256.2%2C E-value 2.9e-74;gbkey=misc_feature;gene=purI;inference=protein motif:PFAM:PF00586
AM286415.1	EMBL	gene	1267515	1268141	.	+	.	ID=gene1127;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;gene_synonym=uraP;locus_tag=YE1128
AM286415.1	EMBL	CDS	1267515	1268141	.	+	0	ID=cds1080;Parent=gene1127;Dbxref=EnsemblGenomes-Gn:YE1128,EnsemblGenomes-Tr:CAL11223,GOA:A1JKZ8,InterPro:IPR005765,InterPro:IPR029057,NCBI_GP:CAL11223.1;Name=CAL11223.1;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=CAL11223.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1267602	1268060	.	+	.	ID=id2115;Note=Pfam match to entry PF00156 Pribosyltran%2CPhosphoribosyl transferase domain%2C score 56.9%2C E-value 2.8e-14;gbkey=misc_feature;gene=upp;inference=protein motif:PFAM:PF00156
AM286415.1	EMBL	gene	1268234	1269523	.	+	.	ID=gene1128;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=YE1129
AM286415.1	EMBL	CDS	1268234	1269523	.	+	0	ID=cds1081;Parent=gene1128;Dbxref=EnsemblGenomes-Gn:YE1129,EnsemblGenomes-Tr:CAL11224,GOA:A1JKZ9,InterPro:IPR006042,InterPro:IPR006043,UniProtKB/TrEMBL:A1JKZ9,NCBI_GP:CAL11224.1;Name=CAL11224.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 uracil permease UraA or b2497 or z3760 or ecs3359 SWALL:URAA_ECOLI (SWALL:P33780) (429 aa) fasta scores: E(): 3.8e-133%2C 89.62 38d in 424 aa and to Salmonella typhi uracil permease Sty2738 SWALL:Q8Z4R3 (EMBL:AL627275) (429 aa) fasta scores: E(): 6.5e-133%2C 88.65 38d in 423 aa;gbkey=CDS;gene=uraA;inference=similar to sequence:UniProtKB:P33780;product=sugar uptake permease;protein_id=CAL11224.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1268276	1269388	.	+	.	ID=id2116;Note=Pfam match to entry PF00860 xan_ur_permease%2CPermease family%2C score 466.2%2C E-value 1.8e-137;gbkey=misc_feature;gene=uraA;inference=protein motif:PFAM:PF00860
AM286415.1	EMBL	sequence_feature	1268291	1268350	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1268363	1268416	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1268435	1268488	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1268498	1268557	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1268576	1268644	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1268687	1268755	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1268768	1268836	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1268909	1268977	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1269143	1269211	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1269224	1269292	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1269326	1269394	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1269407	1269466	.	+	.	ID=id2117;Note=12 probable transmembrane helices predicted for YE1129 by TMHMM2.0 at aa 20-39%2C 44-61%2C 68-85%2C 89-108%2C115-137%2C 152-174%2C 179-201%2C 226-248%2C 304-326%2C 331-353%2C365-387 and 392-411;gbkey=misc_feature;gene=uraA;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	1269218	1269280	.	+	.	ID=id2118;Note=PS01116 Xanthine/uracil permeases family signature.;gbkey=misc_feature;gene=uraA;inference=protein motif:Prosite:PS01116
AM286415.1	EMBL	gene	1269637	1270356	.	+	.	ID=gene1129;Name=YE1130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1130
AM286415.1	EMBL	CDS	1269637	1270356	.	+	0	ID=cds1082;Parent=gene1129;Dbxref=EnsemblGenomes-Gn:YE1130,EnsemblGenomes-Tr:CAL11225,GOA:A1JL00,InterPro:IPR013317,InterPro:IPR017788,InterPro:IPR020591,InterPro:IPR022864,InterPro:IPR027417,NCBI_GP:CAL11225.1;Name=CAL11225.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11225.1;transl_table=11
AM286415.1	EMBL	gene	1270404	1270757	.	-	.	ID=gene1130;Name=yfgD;gbkey=Gene;gene=yfgD;gene_biotype=protein_coding;locus_tag=YE1131
AM286415.1	EMBL	CDS	1270404	1270757	.	-	0	ID=cds1083;Parent=gene1130;Dbxref=EnsemblGenomes-Gn:YE1131,EnsemblGenomes-Tr:CAL11226,GOA:A1JL01,InterPro:IPR006659,InterPro:IPR006660,InterPro:IPR012336,UniProtKB/TrEMBL:A1JL01,NCBI_GP:CAL11226.1;Name=CAL11226.1;gbkey=CDS;gene=yfgD;product=putative arsenate reductase;protein_id=CAL11226.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1270416	1270703	.	-	.	ID=id2119;Note=Pfam match to entry PF03960 ArsC%2C ArsC family %2Cscore 135.1%2C E-value 8.1e-38;gbkey=misc_feature;gene=yfgD;inference=protein motif:PFAM:PF03960
AM286415.1	EMBL	gene	1270769	1272217	.	-	.	ID=gene1131;Name=YE1132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1132
AM286415.1	EMBL	CDS	1270769	1272217	.	-	0	ID=cds1084;Parent=gene1131;Dbxref=EnsemblGenomes-Gn:YE1132,EnsemblGenomes-Tr:CAL11227,GOA:A1JL02,InterPro:IPR001915,InterPro:IPR011990,UniProtKB/TrEMBL:A1JL02,NCBI_GP:CAL11227.1;Name=CAL11227.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11227.1;transl_table=11
AM286415.1	EMBL	gene	1272755	1273819	.	+	.	ID=gene1132;Name=perM;gbkey=Gene;gene=perM;gene_biotype=protein_coding;locus_tag=YE1133
AM286415.1	EMBL	CDS	1272755	1273819	.	+	0	ID=cds1085;Parent=gene1132;Dbxref=EnsemblGenomes-Gn:YE1133,EnsemblGenomes-Tr:CAL11228,InterPro:IPR002549,UniProtKB/TrEMBL:A1JL03,NCBI_GP:CAL11228.1;Name=CAL11228.1;gbkey=CDS;gene=perM;product=putative membrane protein;protein_id=CAL11228.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1272806	1273792	.	+	.	ID=id2120;Note=Pfam match to entry PF01594 UPF0118%2C Domain of unknown function DUF20%2C score 321.8%2C E-value 5.2e-94;gbkey=misc_feature;gene=perM;inference=protein motif:PFAM:PF01594
AM286415.1	EMBL	sequence_feature	1272812	1272907	.	+	.	ID=id2121;Note=7 probable transmembrane helices predicted for YE1133 by TMHMM2.0 at aa 20-51%2C 71-93%2C 155-177%2C 220-242%2C252-274%2C 281-300 and 310-332;gbkey=misc_feature;gene=perM;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1272965	1273033	.	+	.	ID=id2121;Note=7 probable transmembrane helices predicted for YE1133 by TMHMM2.0 at aa 20-51%2C 71-93%2C 155-177%2C 220-242%2C252-274%2C 281-300 and 310-332;gbkey=misc_feature;gene=perM;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1273217	1273285	.	+	.	ID=id2121;Note=7 probable transmembrane helices predicted for YE1133 by TMHMM2.0 at aa 20-51%2C 71-93%2C 155-177%2C 220-242%2C252-274%2C 281-300 and 310-332;gbkey=misc_feature;gene=perM;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1273412	1273480	.	+	.	ID=id2121;Note=7 probable transmembrane helices predicted for YE1133 by TMHMM2.0 at aa 20-51%2C 71-93%2C 155-177%2C 220-242%2C252-274%2C 281-300 and 310-332;gbkey=misc_feature;gene=perM;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1273508	1273576	.	+	.	ID=id2121;Note=7 probable transmembrane helices predicted for YE1133 by TMHMM2.0 at aa 20-51%2C 71-93%2C 155-177%2C 220-242%2C252-274%2C 281-300 and 310-332;gbkey=misc_feature;gene=perM;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1273595	1273654	.	+	.	ID=id2121;Note=7 probable transmembrane helices predicted for YE1133 by TMHMM2.0 at aa 20-51%2C 71-93%2C 155-177%2C 220-242%2C252-274%2C 281-300 and 310-332;gbkey=misc_feature;gene=perM;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1273682	1273750	.	+	.	ID=id2121;Note=7 probable transmembrane helices predicted for YE1133 by TMHMM2.0 at aa 20-51%2C 71-93%2C 155-177%2C 220-242%2C252-274%2C 281-300 and 310-332;gbkey=misc_feature;gene=perM;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	repeat_region	1273877	1275259	.	-	.	ID=id2122;Note=Insertion sequence element IS1667;gbkey=repeat_region
AM286415.1	EMBL	gene	1274153	1275172	.	-	.	ID=gene1133;Name=YE1134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1134
AM286415.1	EMBL	CDS	1274153	1275172	.	-	0	ID=cds1086;Parent=gene1133;Dbxref=EnsemblGenomes-Gn:YE1134,EnsemblGenomes-Tr:CAL11229,GOA:A1JL04,InterPro:IPR002525,InterPro:IPR003346,UniProtKB/TrEMBL:A1JL04,NCBI_GP:CAL11229.1;Name=CAL11229.1;Note=Similar to many including: Pseudomonas putida transposase TnpA1 protein SWALL:Q9K2X6 (EMBL:AJ288911) (344 aa) fasta scores: E(): 2.7e-56%2C 44.89 38d in 343 aa and to Yersinia enterocolitica IS1328 transposase Trp1328 SWALL:Q9RIG6 (EMBL:AJ132945) (334 aa) fasta scores: E(): 5.3e-50%2C 41.86 38d in 332 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ288911;product=putative transposase for IS1667;protein_id=CAL11229.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1274285	1274614	.	-	.	ID=id2123;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 98.8%2C E-value 7.1e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	sequence_feature	1274705	1274983	.	-	.	ID=id2124;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 30.3%2C E-value 2.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	gene	1275468	1275938	.	-	.	ID=gene1134;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=YE1135
AM286415.1	EMBL	CDS	1275468	1275938	.	-	0	ID=cds1087;Parent=gene1134;Dbxref=EnsemblGenomes-Gn:YE1135,EnsemblGenomes-Tr:CAL11230,GOA:A1JL05,InterPro:IPR000866,InterPro:IPR012336,UniProtKB/TrEMBL:A1JL05,NCBI_GP:CAL11230.1;Name=CAL11230.1;gbkey=CDS;gene=bcp;product=bacterioferritin comigratory protein;protein_id=CAL11230.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1275492	1275923	.	-	.	ID=id2125;Note=Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family%2C score 224.4%2C E-value 1.1e-64;gbkey=misc_feature;gene=bcp;inference=protein motif:PFAM:PF00578
AM286415.1	EMBL	sequence_feature	1275786	1275818	.	-	.	ID=id2126;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=bcp;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1275941	1276510	.	-	.	ID=gene1135;Name=gcvR;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=YE1136
AM286415.1	EMBL	CDS	1275941	1276510	.	-	0	ID=cds1088;Parent=gene1135;Dbxref=EnsemblGenomes-Gn:YE1136,EnsemblGenomes-Tr:CAL11231,InterPro:IPR016867,UniProtKB/TrEMBL:A1JL06,NCBI_GP:CAL11231.1;Name=CAL11231.1;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional repressor;protein_id=CAL11231.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1275980	1276225	.	-	.	ID=id2127;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 11.7%2C E-value 0.21;gbkey=misc_feature;gene=gcvR;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	sequence_feature	1276262	1276486	.	-	.	ID=id2128;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 22.1%2C E-value 0.00088;gbkey=misc_feature;gene=gcvR;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	gene	1276675	1277556	.	+	.	ID=gene1136;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=YE1137
AM286415.1	EMBL	CDS	1276675	1277556	.	+	0	ID=cds1089;Parent=gene1136;Dbxref=EnsemblGenomes-Gn:YE1137,EnsemblGenomes-Tr:CAL11232,GOA:A1JL07,InterPro:IPR002220,InterPro:IPR005263,InterPro:IPR013785,InterPro:IPR020624,InterPro:IPR020625,NCBI_GP:CAL11232.1;Name=CAL11232.1;gbkey=CDS;gene=dapA;product=dihydrodipicolinate synthase;protein_id=CAL11232.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1276675	1277547	.	+	.	ID=id2129;Note=Pfam match to entry PF00701 DHDPS%2CDihydrodipicolinate synthetase family%2C score 521.8%2CE-value 3.3e-154;gbkey=misc_feature;gene=dapA;inference=protein motif:PFAM:PF00701
AM286415.1	EMBL	sequence_feature	1276786	1276839	.	+	.	ID=id2130;Note=PS00665 Dihydrodipicolinate synthetase signature 1.;gbkey=misc_feature;gene=dapA;inference=protein motif:Prosite:PS00665
AM286415.1	EMBL	sequence_feature	1277071	1277163	.	+	.	ID=id2131;Note=PS00666 Dihydrodipicolinate synthetase signature 2.;gbkey=misc_feature;gene=dapA;inference=protein motif:Prosite:PS00666
AM286415.1	EMBL	gene	1277573	1278631	.	+	.	ID=gene1137;Name=dapX;gbkey=Gene;gene=dapX;gene_biotype=protein_coding;gene_synonym=nlpB;locus_tag=YE1138
AM286415.1	EMBL	CDS	1277573	1278631	.	+	0	ID=cds1090;Parent=gene1137;Dbxref=EnsemblGenomes-Gn:YE1138,EnsemblGenomes-Tr:CAL11233,GOA:A1JL08,InterPro:IPR010653,InterPro:IPR014524,UniProtKB/TrEMBL:A1JL08,NCBI_GP:CAL11233.1;Name=CAL11233.1;gbkey=CDS;gene=dapX;product=lipoprotein;protein_id=CAL11233.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1277615	1277647	.	+	.	ID=id2132;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=dapX;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1278916	1279629	.	+	.	ID=gene1138;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=YE1140
AM286415.1	EMBL	CDS	1278916	1279629	.	+	0	ID=cds1091;Parent=gene1138;Dbxref=EnsemblGenomes-Gn:YE1140,EnsemblGenomes-Tr:CAL11234,GOA:A1JL09,InterPro:IPR001636,InterPro:IPR013816,InterPro:IPR018236,InterPro:IPR028923,NCBI_GP:CAL11234.1;Name=CAL11234.1;gbkey=CDS;gene=purC;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=CAL11234.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1278922	1279623	.	+	.	ID=id2133;Note=Pfam match to entry PF01259 SAICAR_synt%2C SAICAR synthetase%2C score 386.4%2C E-value 1.8e-113;gbkey=misc_feature;gene=purC;inference=protein motif:PFAM:PF01259
AM286415.1	EMBL	sequence_feature	1279171	1279215	.	+	.	ID=id2134;Note=PS01057 SAICAR synthetase signature 1.;gbkey=misc_feature;gene=purC;inference=protein motif:Prosite:PS01057
AM286415.1	EMBL	sequence_feature	1279432	1279458	.	+	.	ID=id2135;Note=PS01058 SAICAR synthetase signature 2.;gbkey=misc_feature;gene=purC;inference=protein motif:Prosite:PS01058
AM286415.1	EMBL	gene	1280059	1280823	.	+	.	ID=gene1139;Name=YE1141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1141
AM286415.1	EMBL	CDS	1280059	1280823	.	+	0	ID=cds1092;Parent=gene1139;Dbxref=EnsemblGenomes-Gn:YE1141,EnsemblGenomes-Tr:CAL11235,InterPro:IPR007343,UniProtKB/TrEMBL:A1JL10,NCBI_GP:CAL11235.1;Name=CAL11235.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11235.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1280452	1280481	.	+	.	ID=id2136;Note=PS00142 Neutral zinc metallopeptidases%2Czinc-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00142
AM286415.1	EMBL	gene	1280961	1281413	.	+	.	ID=gene1140;Name=yeaL;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=YE1142
AM286415.1	EMBL	CDS	1280961	1281413	.	+	0	ID=cds1093;Parent=gene1140;Dbxref=EnsemblGenomes-Gn:YE1142,EnsemblGenomes-Tr:CAL11236,GOA:A1JL11,InterPro:IPR007382,NCBI_GP:CAL11236.1;Name=CAL11236.1;gbkey=CDS;gene=yeaL;product=putative membrane protein;protein_id=CAL11236.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1280979	1281068	.	+	.	ID=id2137;Note=4 probable transmembrane helices predicted for YE1142 by TMHMM2.0 at aa 7-36%2C 51-73%2C 78-100 and 126-148;gbkey=misc_feature;gene=yeaL;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1281111	1281179	.	+	.	ID=id2137;Note=4 probable transmembrane helices predicted for YE1142 by TMHMM2.0 at aa 7-36%2C 51-73%2C 78-100 and 126-148;gbkey=misc_feature;gene=yeaL;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1281192	1281260	.	+	.	ID=id2137;Note=4 probable transmembrane helices predicted for YE1142 by TMHMM2.0 at aa 7-36%2C 51-73%2C 78-100 and 126-148;gbkey=misc_feature;gene=yeaL;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1281336	1281404	.	+	.	ID=id2137;Note=4 probable transmembrane helices predicted for YE1142 by TMHMM2.0 at aa 7-36%2C 51-73%2C 78-100 and 126-148;gbkey=misc_feature;gene=yeaL;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1281445	1283478	.	+	.	ID=gene1141;Name=YE1143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1143
AM286415.1	EMBL	CDS	1281445	1283478	.	+	0	ID=cds1094;Parent=gene1141;Dbxref=EnsemblGenomes-Gn:YE1143,EnsemblGenomes-Tr:CAL11237,GOA:A1JL12,InterPro:IPR000182,InterPro:IPR007807,InterPro:IPR016181,InterPro:IPR024914,InterPro:IPR027417,InterPro:IPR027992,NCBI_GP:CAL11237.1;Name=CAL11237.1;gbkey=CDS;product=putative acetyltransferase;protein_id=CAL11237.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1282006	1282029	.	+	.	ID=id2138;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1283562	1284197	.	+	.	ID=gene1142;Name=YE1144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1144
AM286415.1	EMBL	CDS	1283562	1284197	.	+	0	ID=cds1095;Parent=gene1142;Dbxref=EnsemblGenomes-Gn:YE1144,EnsemblGenomes-Tr:CAL11238,GOA:A1JL13,InterPro:IPR003140,InterPro:IPR029058,UniProtKB/TrEMBL:A1JL13,NCBI_GP:CAL11238.1;Name=CAL11238.1;Note=Similar to Escherichia coli hypothetical protein YpfH or b2473 SWALL:YPFH_ECOLI (SWALL:P76561) (232 aa) fasta scores: E(): 2.6e-36%2C 51.7 38d in 205 aa and to Rickettsia prowazekii hypothetical protein Rp744 SWALL:Y744_RICPR (SWALL:O05958) (215 aa) fasta scores: E(): 2.4e-09%2C 29.23 38d in 195 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76561;product=conserved hypothetical protein;protein_id=CAL11238.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1283565	1284185	.	+	.	ID=id2139;Note=Pfam match to entry PF02230 abhydrolase_2%2CPhospholipase/Carboxylesterase%2C score 105.1%2C E-value 9.1e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF02230
AM286415.1	EMBL	gene	1284224	1284418	.	-	.	ID=gene1143;Name=YE1145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1145
AM286415.1	EMBL	CDS	1284224	1284418	.	-	0	ID=cds1096;Parent=gene1143;Dbxref=EnsemblGenomes-Gn:YE1145,EnsemblGenomes-Tr:CAL11239,GOA:A1JL14,InterPro:IPR020910,NCBI_GP:CAL11239.1;Name=CAL11239.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11239.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1284350	1284409	.	-	.	ID=id2140;Note=1 probable transmembrane helix predicted for YE1145 by TMHMM2.0 at aa 4-23;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1284453	1285157	.	-	.	ID=gene1144;Name=YE1146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1146
AM286415.1	EMBL	CDS	1284453	1285157	.	-	0	ID=cds1097;Parent=gene1144;Dbxref=EnsemblGenomes-Gn:YE1146,EnsemblGenomes-Tr:CAL11240,GOA:A1JL15,InterPro:IPR003709,InterPro:IPR009045,UniProtKB/TrEMBL:A1JL15,NCBI_GP:CAL11240.1;Name=CAL11240.1;gbkey=CDS;product=putative carboxypeptidase;protein_id=CAL11240.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1284564	1285085	.	-	.	ID=id2141;Note=Pfam match to entry PF02557 VanY%2CD-alanyl-D-alanine carboxypeptidase%2C score 31.3%2C E-value 2.1e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF02557
AM286415.1	EMBL	gene	1285154	1286281	.	-	.	ID=gene1145;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;gene_synonym=msgB;locus_tag=YE1147
AM286415.1	EMBL	CDS	1285154	1286281	.	-	0	ID=cds1098;Parent=gene1145;Dbxref=EnsemblGenomes-Gn:YE1147,EnsemblGenomes-Tr:CAL11241,GOA:A1JL17,InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR005941,InterPro:IPR011650,NCBI_GP:CAL11241.1;Name=CAL11241.1;gbkey=CDS;gene=dapE;product=succinyl-diaminopimelate desuccinylase;protein_id=CAL11241.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1285310	1286257	.	-	.	ID=id2142;Note=Pfam match to entry PF01546 Peptidase_M20%2CPeptidase family M20/M25/M40%2C score 287.4%2C E-value 1.2e-83;gbkey=misc_feature;gene=dapE;inference=protein motif:PFAM:PF01546
AM286415.1	EMBL	sequence_feature	1286072	1286101	.	-	.	ID=id2143;Note=PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1.;gbkey=misc_feature;gene=dapE;inference=protein motif:Prosite:PS00758
AM286415.1	EMBL	gene	1286283	1286705	.	-	.	ID=gene1146;Name=YE1148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1148
AM286415.1	EMBL	CDS	1286283	1286705	.	-	0	ID=cds1099;Parent=gene1146;Dbxref=EnsemblGenomes-Gn:YE1148,EnsemblGenomes-Tr:CAL11242,InterPro:IPR006504,InterPro:IPR006660,InterPro:IPR012336,UniProtKB/TrEMBL:A1JL18,NCBI_GP:CAL11242.1;Name=CAL11242.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11242.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1286346	1286633	.	-	.	ID=id2144;Note=Pfam match to entry PF03960 ArsC%2C ArsC family %2Cscore 121.0%2C E-value 1.5e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF03960
AM286415.1	EMBL	gene	1286868	1287341	.	-	.	ID=gene1147;Name=YE1149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1149
AM286415.1	EMBL	CDS	1286868	1287341	.	-	0	ID=cds1100;Parent=gene1147;Dbxref=EnsemblGenomes-Gn:YE1149,EnsemblGenomes-Tr:CAL11243,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,UniProtKB/TrEMBL:A1JL19,NCBI_GP:CAL11243.1;Name=CAL11243.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11243.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1287036	1287137	.	-	.	ID=id2145;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 14.2%2C E-value 0.088;gbkey=misc_feature;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	sequence_feature	1287147	1287248	.	-	.	ID=id2146;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 6.4%2C E-value 0.6;gbkey=misc_feature;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	gene	1287801	1289015	.	-	.	ID=gene1148;Name=YE1150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1150
AM286415.1	EMBL	CDS	1287801	1289015	.	-	0	ID=cds1101;Parent=gene1148;Dbxref=EnsemblGenomes-Gn:YE1150,EnsemblGenomes-Tr:CAL11244,InterPro:IPR003776,UniProtKB/TrEMBL:A1JL20,NCBI_GP:CAL11244.1;Name=CAL11244.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11244.1;transl_table=11
AM286415.1	EMBL	gene	1289613	1292744	.	-	.	ID=gene1149;Name=YE1151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1151
AM286415.1	EMBL	CDS	1289613	1292744	.	-	0	ID=cds1102;Parent=gene1149;Dbxref=EnsemblGenomes-Gn:YE1151,EnsemblGenomes-Tr:CAL11245,GOA:A1JL21,InterPro:IPR001036,InterPro:IPR004764,InterPro:IPR027463,UniProtKB/TrEMBL:A1JL21,NCBI_GP:CAL11245.1;Name=CAL11245.1;gbkey=CDS;product=multidrug efflux protein;protein_id=CAL11245.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1289664	1292744	.	-	.	ID=id2147;Note=Pfam match to entry PF00873 ACR_tran%2CAcrB/AcrD/AcrF family%2C score 1942.2%2C E-value 0;gbkey=misc_feature;inference=protein motif:PFAM:PF00873
AM286415.1	EMBL	sequence_feature	1292649	1292717	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1291668	1291727	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1291572	1291640	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1291359	1291427	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1291263	1291331	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1291056	1291124	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1290075	1290143	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1289988	1290056	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1289907	1289975	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1289778	1289846	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1289667	1289735	.	-	.	ID=id2148;Note=11 probable transmembrane helices predicted for YE1151 by TMHMM2.0 at aa 10-32%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 868-890%2C 897-919%2C 924-946%2C 967-989 and 1004-1026;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	1293154	1293432	.	+	.	ID=gene1150;Name=YE1152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1152
AM286415.1	EMBL	CDS	1293154	1293432	.	+	0	ID=cds1103;Parent=gene1150;Dbxref=EnsemblGenomes-Gn:YE1152,EnsemblGenomes-Tr:CAL11246,InterPro:IPR017162,UniProtKB/TrEMBL:A1JL22,NCBI_GP:CAL11246.1;Name=CAL11246.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11246.1;transl_table=11
AM286415.1	EMBL	gene	1293471	1294100	.	-	.	ID=gene1151;Name=narP;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=YE1153
AM286415.1	EMBL	CDS	1293471	1294100	.	-	0	ID=cds1104;Parent=gene1151;Dbxref=EnsemblGenomes-Gn:YE1153,EnsemblGenomes-Tr:CAL11247,GOA:A1JL23,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JL23,NCBI_GP:CAL11247.1;Name=CAL11247.1;gbkey=CDS;gene=narP;product=nitrate/nitrite response regulator protein NarP;protein_id=CAL11247.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1293474	1293665	.	-	.	ID=id2149;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 84.8%2C E-value 1.1e-22;gbkey=misc_feature;gene=narP;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	1293531	1293614	.	-	.	ID=id2150;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=narP;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	sequence_feature	1293546	1293611	.	-	.	ID=id2151;Note=Predicted helix-turn-helix motif with score 1864.000%2C SD 5.54 at aa 164-185%2C sequence MSNKQVAFELHISEETVKVHIR;gbkey=misc_feature;gene=narP
AM286415.1	EMBL	sequence_feature	1293723	1294088	.	-	.	ID=id2152;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 134.9%2C E-value 9.3e-38;gbkey=misc_feature;gene=narP;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	1294605	1295108	.	+	.	ID=gene1152;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=YE1154
AM286415.1	EMBL	CDS	1294605	1295108	.	+	0	ID=cds1105;Parent=gene1152;Dbxref=EnsemblGenomes-Gn:YE1154,EnsemblGenomes-Tr:CAL11248,GOA:A1JL24,InterPro:IPR001450,InterPro:IPR004496,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JL24,NCBI_GP:CAL11248.1;Name=CAL11248.1;gbkey=CDS;gene=napF;product=ferredoxin-type protein NapF;protein_id=CAL11248.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1294698	1294769	.	+	.	ID=id2153;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 8.9%2C E-value 0.007;gbkey=misc_feature;gene=napF;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	1294719	1294754	.	+	.	ID=id2154;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=napF;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	1294794	1294865	.	+	.	ID=id2155;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 17.5%2C E-value 0.00032;gbkey=misc_feature;gene=napF;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	1294815	1294850	.	+	.	ID=id2156;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=napF;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	1295010	1295081	.	+	.	ID=id2157;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 29.4%2C E-value 4.4e-06;gbkey=misc_feature;gene=napF;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	1295031	1295066	.	+	.	ID=id2158;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=napF;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	1295098	1295364	.	+	.	ID=gene1153;Name=napD;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=YE1155
AM286415.1	EMBL	CDS	1295098	1295364	.	+	0	ID=cds1106;Parent=gene1153;Dbxref=EnsemblGenomes-Gn:YE1155,EnsemblGenomes-Tr:CAL11249,InterPro:IPR005623,UniProtKB/TrEMBL:A1JL25,NCBI_GP:CAL11249.1;Name=CAL11249.1;gbkey=CDS;gene=napD;product=conserved hypothetical protein;protein_id=CAL11249.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1295107	1295346	.	+	.	ID=id2159;Note=Pfam match to entry PF03927 NapD%2C NapD protein %2Cscore 117.0%2C E-value 2.3e-32;gbkey=misc_feature;gene=napD;inference=protein motif:PFAM:PF03927
AM286415.1	EMBL	gene	1295361	1297856	.	+	.	ID=gene1154;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=YE1156
AM286415.1	EMBL	CDS	1295361	1297856	.	+	0	ID=cds1107;Parent=gene1154;Dbxref=EnsemblGenomes-Gn:YE1156,EnsemblGenomes-Tr:CAL11250,GOA:A1JL26,InterPro:IPR006311,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR010051,InterPro:IPR019546,InterPro:IPR027467,NCBI_GP:CAL11250.1;Name=CAL11250.1;gbkey=CDS;gene=napA;product=periplasmic nitrate reductase precursor;protein_id=CAL11250.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1295478	1297331	.	+	.	ID=id2160;Note=Pfam match to entry PF00384 molybdopterin%2CMolybdopterin oxidoreductase%2C score 622.8%2C E-value 1.3e-184;gbkey=misc_feature;gene=napA;inference=protein motif:PFAM:PF00384
AM286415.1	EMBL	sequence_feature	1295493	1295546	.	+	.	ID=id2161;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1.;gbkey=misc_feature;gene=napA;inference=protein motif:Prosite:PS00551
AM286415.1	EMBL	sequence_feature	1297503	1297829	.	+	.	ID=id2162;Note=Pfam match to entry PF01568 Molydop_binding%2CMolydopterin dinucleotide binding domain%2C score 152.6%2CE-value 4.6e-43;gbkey=misc_feature;gene=napA;inference=protein motif:PFAM:PF01568
AM286415.1	EMBL	gene	1297939	1298394	.	+	.	ID=gene1155;Name=napB;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=YE1157
AM286415.1	EMBL	CDS	1297939	1298394	.	+	0	ID=cds1108;Parent=gene1155;Dbxref=EnsemblGenomes-Gn:YE1157,EnsemblGenomes-Tr:CAL11251,GOA:A1JL27,InterPro:IPR005591,InterPro:IPR027406,UniProtKB/TrEMBL:A1JL27,NCBI_GP:CAL11251.1;Name=CAL11251.1;gbkey=CDS;gene=napB;product=cytochrome C-type protein NapB precursor;protein_id=CAL11251.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1297963	1298031	.	+	.	ID=id2163;Note=1 probable transmembrane helix predicted for YE1157 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;gene=napB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1297966	1298388	.	+	.	ID=id2164;Note=Pfam match to entry PF03892 NapB%2C Nitrate reductase cytochrome c-type subunit (NapB)%2C score 197.1%2C E-value 1.7e-56;gbkey=misc_feature;gene=napB;inference=protein motif:PFAM:PF03892
AM286415.1	EMBL	sequence_feature	1298191	1298208	.	+	.	ID=id2165;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=napB;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1298311	1298328	.	+	.	ID=id2166;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=napB;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	1298422	1299021	.	+	.	ID=gene1156;Name=napC;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=YE1158
AM286415.1	EMBL	CDS	1298422	1299021	.	+	0	ID=cds1109;Parent=gene1156;Dbxref=EnsemblGenomes-Gn:YE1158,EnsemblGenomes-Tr:CAL11252,GOA:A1JL28,InterPro:IPR005126,InterPro:IPR011031,InterPro:IPR011885,InterPro:IPR024717,UniProtKB/TrEMBL:A1JL28,NCBI_GP:CAL11252.1;Name=CAL11252.1;gbkey=CDS;gene=napC;product=cytochrome C-type protein NapC;protein_id=CAL11252.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1298476	1298997	.	+	.	ID=id2167;Note=Pfam match to entry PF03264 Cytochrome_NNT%2CNapC/NirT cytochrome c family%2C N-terminal region%2C score 401.6%2C E-value 4.9e-118;gbkey=misc_feature;gene=napC;inference=protein motif:PFAM:PF03264
AM286415.1	EMBL	sequence_feature	1298482	1298550	.	+	.	ID=id2168;Note=1 probable transmembrane helix predicted for YE1158 by TMHMM2.0 at aa 21-43;gbkey=misc_feature;gene=napC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1298587	1298604	.	+	.	ID=id2169;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=napC;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1298857	1298874	.	+	.	ID=id2170;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=napC;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1298953	1298970	.	+	.	ID=id2171;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=napC;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	1299175	1299426	.	+	.	ID=gene1157;Name=YE1159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1159
AM286415.1	EMBL	CDS	1299175	1299426	.	+	0	ID=cds1110;Parent=gene1157;Dbxref=EnsemblGenomes-Gn:YE1159,EnsemblGenomes-Tr:CAL11253,InterPro:IPR006442,UniProtKB/TrEMBL:A1JL29,NCBI_GP:CAL11253.1;Name=CAL11253.1;Note=Similar to seveal including: Escherichia coli Orf44 protein SWALL:Q9S122 (EMBL:AB024946) (83 aa) fasta scores: E(): 3.8e-26%2C 79.51 38d in 83 aa and to Escherichia coli IncF plasmid RepFIB replicon SWALL:Q60256 (EMBL:M26308) (83 aa) fasta scores: E(): 4.5e-26%2C 79.51 38d in 83 aa%2Cand to Salmonella typhimurium putative cytoplasmic protein Stm1551 SWALL:Q8ZPF8 (EMBL:AE008767) (82 aa) fasta scores: E(): 5.8e-15%2C 55.26 38d in 76 aa;gbkey=CDS;inference=similar to sequence:INSDC:M26308;product=conserved hypothetical protein;protein_id=CAL11253.1;transl_table=11
AM286415.1	EMBL	gene	1299423	1299710	.	+	.	ID=gene1158;Name=YE1160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1160
AM286415.1	EMBL	CDS	1299423	1299710	.	+	0	ID=cds1111;Parent=gene1158;Dbxref=EnsemblGenomes-Gn:YE1160,EnsemblGenomes-Tr:CAL11254,InterPro:IPR007712,UniProtKB/TrEMBL:A1JL30,NCBI_GP:CAL11254.1;Name=CAL11254.1;Note=Similar to Escherichia coli hypothetical RelE protein or b1563 SWALL:RELE_ECOLI (SWALL:P07008) (95 aa) fasta scores: E(): 2.5e-16%2C 55.31 38d in 94 aa%2CEscherichia coli Orf43 protein SWALL:Q9S123 (EMBL:AB024946) (95 aa) fasta scores: E(): 2.2e-28%2C 81.05 id in 95 aa%2C and to Escherichia coli hypothetical RelE-like protein SWALL:RELX_ECOLI (SWALL:Q60228) (95 aa) fasta scores: E(): 7e-27%2C 77.89 38d in 95 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q60228;product=conserved hypothetical protein;protein_id=CAL11254.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1299591	1299659	.	+	.	ID=id2172;Note=1 probable transmembrane helix predicted for YE1160 by TMHMM2.0 at aa 57-79;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1299739	1300314	.	+	.	ID=gene1159;Name=YE1161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1161
AM286415.1	EMBL	CDS	1299739	1300314	.	+	0	ID=cds1112;Parent=gene1159;Dbxref=EnsemblGenomes-Gn:YE1161,EnsemblGenomes-Tr:CAL11255,GOA:A1JL31,InterPro:IPR000086,InterPro:IPR004385,InterPro:IPR015797,NCBI_GP:CAL11255.1;Name=CAL11255.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11255.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1299868	1300290	.	+	.	ID=id2173;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 85.1%2C E-value 9.1e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	sequence_feature	1300246	1300269	.	+	.	ID=id2174;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1300535	1302814	.	+	.	ID=gene1160;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=YE1162
AM286415.1	EMBL	CDS	1300535	1302814	.	+	0	ID=cds1113;Parent=gene1160;Dbxref=EnsemblGenomes-Gn:YE1162,EnsemblGenomes-Tr:CAL11256,GOA:A1JL32,InterPro:IPR002505,InterPro:IPR012188,InterPro:IPR012301,InterPro:IPR012302,InterPro:IPR015884,InterPro:IPR016040,UniProtKB/TrEMBL:A1JL32,NCBI_GP:CAL11256.1;Name=CAL11256.1;gbkey=CDS;gene=maeB;product=NADP-dependent malic enzyme;protein_id=CAL11256.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1300586	1301017	.	+	.	ID=id2175;Note=Pfam match to entry PF00390 malic%2C Malic enzyme%2CN-terminal domain%2C score 274.3%2C E-value 1.1e-79;gbkey=misc_feature;gene=maeB;inference=protein motif:PFAM:PF00390
AM286415.1	EMBL	sequence_feature	1301021	1301737	.	+	.	ID=id2176;Note=Pfam match to entry PF03949 malic_N%2C Malic enzyme%2CNAD binding domain%2C score 453.2%2C E-value 1.4e-133;gbkey=misc_feature;gene=maeB;inference=protein motif:PFAM:PF03949
AM286415.1	EMBL	sequence_feature	1301108	1301140	.	+	.	ID=id2177;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=maeB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1301819	1302787	.	+	.	ID=id2178;Note=Pfam match to entry PF01515 PTA_PTB%2C Phosphate acetyl/butaryl transferase%2C score 411.7%2C E-value 4.4e-121;gbkey=misc_feature;gene=maeB;inference=protein motif:PFAM:PF01515
AM286415.1	EMBL	sequence_feature	1302068	1302133	.	+	.	ID=id2179;Note=Predicted helix-turn-helix motif with score 1150.000%2C SD 3.10 at aa 512-533%2C sequence HEYYQIMKRRGVSQEQARRAVI;gbkey=misc_feature;gene=maeB
AM286415.1	EMBL	repeat_region	1302955	1304337	.	-	.	ID=id2180;Note=Insertion sequence element IS1667;gbkey=repeat_region
AM286415.1	EMBL	gene	1303231	1304250	.	-	.	ID=gene1161;Name=YE1163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1163
AM286415.1	EMBL	CDS	1303231	1304250	.	-	0	ID=cds1114;Parent=gene1161;Dbxref=EnsemblGenomes-Gn:YE1163,EnsemblGenomes-Tr:CAL11257,GOA:A1JL33,InterPro:IPR002525,InterPro:IPR003346,UniProtKB/TrEMBL:A1JL33,NCBI_GP:CAL11257.1;Name=CAL11257.1;Note=Similar to many including: Pseudomonas putida transposase Tnpa1 protein SWALL:Q9K2X6 (EMBL:AJ288911) (344 aa) fasta scores: E(): 5.3e-56%2C 45.93 38d in 344 aa and to Yersinia enterocolitica IS1328 transposase Trp1328 SWALL:Q9RIG6 (EMBL:AJ132945) (334 aa) fasta scores: E(): 1.2e-49%2C 42.16 38d in 332 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ288911;product=putative transposase for IS1667;protein_id=CAL11257.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1303363	1303692	.	-	.	ID=id2181;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 102.0%2CE-value 7.7e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	sequence_feature	1303783	1304061	.	-	.	ID=id2182;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 30.3%2C E-value 2.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	gene	1304987	1305673	.	+	.	ID=gene1162;Name=YE1165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1165
AM286415.1	EMBL	CDS	1304987	1305673	.	+	0	ID=cds1115;Parent=gene1162;Dbxref=EnsemblGenomes-Gn:YE1165,EnsemblGenomes-Tr:CAL11258,GOA:A1JL34,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JL34,NCBI_GP:CAL11258.1;Name=CAL11258.1;Note=Similar to several including: Salmonella typhimurium secretion system regulatory protein SsrB SWALL:O54305 (EMBL:Z95891) (193 aa) fasta scores: E(): 1.5e-05%2C 30.46 38d in 174 aa%2C and to Escherichia coli%2C and Escherichia coli O157:H7 regulator of fimbriae protein FimZ or b0535 or z0693 or ecs0597 SWALL:FIMZ_ECOLI (SWALL:P21502) (210 aa) fasta scores: E(): 7.1e-05%2C 27.51 id in 189 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P21502;product=putative LuxR-family transcriptional regulatory protein;protein_id=CAL11258.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1305476	1305670	.	+	.	ID=id2183;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 52.2%2C E-value 7.5e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	1305527	1305610	.	+	.	ID=id2184;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	gene	1305680	1306582	.	-	.	ID=gene1163;Name=YE1166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1166
AM286415.1	EMBL	CDS	1305680	1306582	.	-	0	ID=cds1116;Parent=gene1163;Dbxref=EnsemblGenomes-Gn:YE1166,EnsemblGenomes-Tr:CAL11259,GOA:A1JL35,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JL35,NCBI_GP:CAL11259.1;Name=CAL11259.1;Note=Similar to many utative transcriptional regulators including: Salmonella typhimurium LysR family YbdO or Stm0606 SWALL:Q8ZR23 (EMBL:AE008724) (300 aa) fasta scores: E(): 4.4e-12%2C 23.25 38d in 301 aa and to Salmonella typhimurium probable activator protein in leuABCD operon LeuO or Stm0115 SWALL:LEUO_SALTY (SWALL:P46924) (314 aa) fasta scores: E(): 2e-07%2C 22.42 id in 281 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P46924;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL11259.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1306388	1306567	.	-	.	ID=id2185;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 42.3%2C E-value 7.3e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	1306433	1306525	.	-	.	ID=id2186;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	1306463	1306528	.	-	.	ID=id2187;Note=Predicted helix-turn-helix motif with score 1184.000%2C SD 3.22 at aa 19-40%2C sequence RSVTRTAEELDVAISTVSHGLA;gbkey=misc_feature
AM286415.1	EMBL	gene	1306694	1307152	.	-	.	ID=gene1164;Name=YE1167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1167
AM286415.1	EMBL	CDS	1306694	1307152	.	-	0	ID=cds1117;Parent=gene1164;Dbxref=EnsemblGenomes-Gn:YE1167,EnsemblGenomes-Tr:CAL11260,InterPro:IPR003791,NCBI_GP:CAL11260.1;Name=CAL11260.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11260.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1306715	1307152	.	-	.	ID=id2188;Note=Pfam match to entry PF02639 DUF188%2C Uncharacterized BCR%2C YaiI/YqxD family COG1671%2C score 255.8%2C E-value 3.7e-74;gbkey=misc_feature;inference=protein motif:PFAM:PF02639
AM286415.1	EMBL	gene	1307152	1308078	.	-	.	ID=gene1165;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=YE1168
AM286415.1	EMBL	CDS	1307152	1308078	.	-	0	ID=cds1118;Parent=gene1165;Dbxref=EnsemblGenomes-Gn:YE1168,EnsemblGenomes-Tr:CAL11261,GOA:A1JL37,InterPro:IPR001260,InterPro:IPR018375,NCBI_GP:CAL11261.1;Name=CAL11261.1;gbkey=CDS;gene=hemF;product=coproporphyrinogen III oxidase%2C aerobic HemF;protein_id=CAL11261.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1307173	1308075	.	-	.	ID=id2189;Note=Pfam match to entry PF01218 Coprogen_oxidas%2CCoproporphyrinogen III oxidase%2C score 698.6%2C E-value 2e-207;gbkey=misc_feature;gene=hemF;inference=protein motif:PFAM:PF01218
AM286415.1	EMBL	sequence_feature	1307509	1307583	.	-	.	ID=id2190;Note=PS01021 Coproporphyrinogen III oxidase signature.;gbkey=misc_feature;gene=hemF;inference=protein motif:Prosite:PS01021
AM286415.1	EMBL	gene	1308309	1308734	.	+	.	ID=gene1166;Name=YE1169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1169
AM286415.1	EMBL	CDS	1308309	1308734	.	+	0	ID=cds1119;Parent=gene1166;Dbxref=EnsemblGenomes-Gn:YE1169,EnsemblGenomes-Tr:CAL11262,GOA:A1JL38,InterPro:IPR000182,InterPro:IPR016181,InterPro:IPR023072,NCBI_GP:CAL11262.1;Name=CAL11262.1;gbkey=CDS;product=putative acetyltransferase;protein_id=CAL11262.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1308444	1308680	.	+	.	ID=id2191;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 74.2%2C E-value 1.8e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	repeat_region	1308551	1308718	.	+	.	ID=id2192;Note=Direct repeat flanking low GC region%2C possible integrated plasmid%2C 168mer;gbkey=repeat_region
AM286415.1	EMBL	sequence_feature	1308551	1323148	.	+	.	ID=id2193;Note=Low GC region%2C possible integrated plasmid%3B bordered by direct repeats;gbkey=misc_feature;standard_name=YGI-4
AM286415.1	EMBL	gene	1308992	1310110	.	+	.	ID=gene1167;Name=YE1170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1170
AM286415.1	EMBL	CDS	1308992	1310110	.	+	0	ID=cds1120;Parent=gene1167;Dbxref=EnsemblGenomes-Gn:YE1170,EnsemblGenomes-Tr:CAL11263,GOA:A1JL39,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR023109,UniProtKB/TrEMBL:A1JL39,NCBI_GP:CAL11263.1;Name=CAL11263.1;Note=Similar%2C at least in parts%2C to Escherichia coli shufflon-specific DNA recombinase Rci SWALL:RCI1_ECOLI (SWALL:P10487) (384 aa) fasta scores: E(): 4.7e-07%2C 35.71 id in 322 aa and to Ralstonia solanacearum putative integrase/recombinase protein Rsc1554 or Rs05241 SWALL:Q8XZ52 (EMBL:AL646065) (354 aa) fasta scores: E(): 1.8e-07%2C 34.21 38d in 380 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P10487;product=putative integrase/recombinase protein;protein_id=CAL11263.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1309550	1310098	.	+	.	ID=id2194;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 105.8%2C E-value 5.4e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	1310337	1311557	.	+	.	ID=gene1168;Name=YE1171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1171
AM286415.1	EMBL	CDS	1310337	1311557	.	+	0	ID=cds1121;Parent=gene1168;Dbxref=EnsemblGenomes-Gn:YE1171,EnsemblGenomes-Tr:CAL11264,InterPro:IPR000477,UniProtKB/TrEMBL:A1JL40,NCBI_GP:CAL11264.1;Name=CAL11264.1;Note=Weakly similar in parts to Pseudomonas alcaligenes putative maturase/reverse transcriptase SWALL:Q9AMP0 (EMBL:AF323437) (407 aa) fasta scores: E(): 0.00065%2C23.24 38d in 185 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF323437;product=putative maturase protein;protein_id=CAL11264.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1310622	1311098	.	+	.	ID=id2195;Note=Pfam match to entry PF00078 rvt%2C Reverse transcriptase (RNA-dependent DNA polymerase)%2C score 46.1%2CE-value 9.6e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00078
AM286415.1	EMBL	sequence_feature	1311384	1311470	.	+	.	ID=id2196;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	1311562	1313568	.	+	.	ID=gene1169;Name=YE1172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1172
AM286415.1	EMBL	CDS	1311562	1313568	.	+	0	ID=cds1122;Parent=gene1169;Dbxref=EnsemblGenomes-Gn:YE1172,EnsemblGenomes-Tr:CAL11265,GOA:A1JL41,InterPro:IPR000477,UniProtKB/TrEMBL:A1JL41,NCBI_GP:CAL11265.1;Name=CAL11265.1;Note=Weakly similar in parts to Synechocystis sp. hypothetical protein Sll1503 SWALL:P72998 (EMBL:D90902) (508 aa) fasta scores: E(): 4.5e-10%2C 26.31 38d in 323 aa;gbkey=CDS;inference=similar to sequence:INSDC:D90902;product=putative DNA-binding protein;protein_id=CAL11265.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1312387	1312542	.	+	.	ID=id2197;Note=Pfam match to entry PF00078 rvt%2C Reverse transcriptase (RNA-dependent DNA polymerase)%2C score 17.9%2CE-value 5.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00078
AM286415.1	EMBL	sequence_feature	1313113	1313178	.	+	.	ID=id2198;Note=Predicted helix-turn-helix motif with score 1119.000%2C SD 3.00 at aa 518-539%2C sequence ICLKELGDEYSLSEEYLLSLLN;gbkey=misc_feature
AM286415.1	EMBL	gene	1314461	1315768	.	-	.	ID=gene1170;Name=YE1175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1175
AM286415.1	EMBL	CDS	1314461	1315768	.	-	0	ID=cds1123;Parent=gene1170;Dbxref=EnsemblGenomes-Gn:YE1175,EnsemblGenomes-Tr:CAL11266,InterPro:IPR012893,InterPro:IPR012894,InterPro:IPR017508,UniProtKB/TrEMBL:A1JL42,NCBI_GP:CAL11266.1;Name=CAL11266.1;Note=Similar to Caulobacter crescentus hypothetical protein Cc2770 cc2770 SWALL:Q9A4R0 (EMBL:AE005942) (435 aa) fasta scores: E(): 1.9e-65%2C 42.55 38d in 423 aa%2C and to Erwinia amylovora hypothetical 47.8 kDa protein SWALL:Q9F814 (EMBL:AF264948) (427 aa) fasta scores: E(): 7.1e-20%2C 32.62 38d in 426 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF264948;product=conserved hypothetical protein;protein_id=CAL11266.1;transl_table=11
AM286415.1	EMBL	gene	1315768	1316175	.	-	.	ID=gene1171;Name=YE1175A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1175A
AM286415.1	EMBL	CDS	1315768	1316175	.	-	0	ID=cds1124;Parent=gene1171;Dbxref=EnsemblGenomes-Gn:YE1175A,EnsemblGenomes-Tr:CAL11267,GOA:A1JL43,InterPro:IPR001387,InterPro:IPR010982,UniProtKB/TrEMBL:A1JL43,NCBI_GP:CAL11267.1;Name=CAL11267.1;Note=Similar to Caulobacter crescentus transcriptional regulator%2C Cro/CI family Cc2771 SWALL:Q9A4Q9 (EMBL:AE005942) (119 aa) fasta scores: E(): 5.7e-06%2C 34.9 id in 106 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005942;product=Cro/CI family transcriptional regulator;protein_id=CAL11267.1;transl_table=11
AM286415.1	EMBL	gene	1316273	1316497	.	-	.	ID=gene1172;Name=YE1176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1176
AM286415.1	EMBL	CDS	1316273	1316497	.	-	0	ID=cds1125;Parent=gene1172;Dbxref=EnsemblGenomes-Gn:YE1176,EnsemblGenomes-Tr:CAL11268,UniProtKB/TrEMBL:A1JL44,NCBI_GP:CAL11268.1;Name=CAL11268.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11268.1;transl_table=11
AM286415.1	EMBL	gene	1316984	1318384	.	-	.	ID=gene1173;Name=YE1177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1177
AM286415.1	EMBL	CDS	1316984	1318384	.	-	0	ID=cds1126;Parent=gene1173;Dbxref=EnsemblGenomes-Gn:YE1177,EnsemblGenomes-Tr:CAL11269,GOA:A1JL45,InterPro:IPR007688,InterPro:IPR014150,UniProtKB/TrEMBL:A1JL45,NCBI_GP:CAL11269.1;Name=CAL11269.1;Note=Similar to Rhizobium sp. probable conjugal transfer protein TrbL or y4dC SWALL:TRBL_RHISN (SWALL:P55402) (391 aa) fasta scores: E(): 4.2e-16%2C 27.27 38d in 385 aa%2C and to Enterobacter aerogenes plasmid R751 conjugal transfer protein TrbL SWALL:P71187 (EMBL:U67194) (572 aa) fasta scores: E(): 9.9e-62%2C 50.46 38d in 432 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P55402;product=putative conjugal transfer protein;protein_id=CAL11269.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1318169	1318237	.	-	.	ID=id2199;Note=7 probable transmembrane helices predicted for YE1177 by TMHMM2.0 at aa 9-28%2C 50-72%2C 92-114%2C 154-176%2C181-203%2C 216-238 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1318043	1318111	.	-	.	ID=id2199;Note=7 probable transmembrane helices predicted for YE1177 by TMHMM2.0 at aa 9-28%2C 50-72%2C 92-114%2C 154-176%2C181-203%2C 216-238 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1317857	1317925	.	-	.	ID=id2199;Note=7 probable transmembrane helices predicted for YE1177 by TMHMM2.0 at aa 9-28%2C 50-72%2C 92-114%2C 154-176%2C181-203%2C 216-238 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1317776	1317844	.	-	.	ID=id2199;Note=7 probable transmembrane helices predicted for YE1177 by TMHMM2.0 at aa 9-28%2C 50-72%2C 92-114%2C 154-176%2C181-203%2C 216-238 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1317671	1317739	.	-	.	ID=id2199;Note=7 probable transmembrane helices predicted for YE1177 by TMHMM2.0 at aa 9-28%2C 50-72%2C 92-114%2C 154-176%2C181-203%2C 216-238 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1317545	1317613	.	-	.	ID=id2199;Note=7 probable transmembrane helices predicted for YE1177 by TMHMM2.0 at aa 9-28%2C 50-72%2C 92-114%2C 154-176%2C181-203%2C 216-238 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1317434	1317502	.	-	.	ID=id2199;Note=7 probable transmembrane helices predicted for YE1177 by TMHMM2.0 at aa 9-28%2C 50-72%2C 92-114%2C 154-176%2C181-203%2C 216-238 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	1318398	1318577	.	-	.	ID=gene1174;Name=YE1177A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1177A
AM286415.1	EMBL	CDS	1318398	1318577	.	-	0	ID=cds1127;Parent=gene1174;Dbxref=EnsemblGenomes-Gn:YE1177A,EnsemblGenomes-Tr:CAL11270,InterPro:IPR027584,UniProtKB/TrEMBL:A1JL46,NCBI_GP:CAL11270.1;Name=CAL11270.1;Note=Weakly similar to Escherichia coli entry exclusion protein B EexB or TrbK SWALL:Q03535 (EMBL:M93696) (69 aa) fasta scores: E(): 0.018%2C 34.32 38d in 67 aa;gbkey=CDS;inference=similar to sequence:INSDC:M93696;product=hypothetical protein;protein_id=CAL11270.1;transl_table=11
AM286415.1	EMBL	gene	1318588	1319367	.	-	.	ID=gene1175;Name=YE1178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1178
AM286415.1	EMBL	CDS	1318588	1319367	.	-	0	ID=cds1128;Parent=gene1175;Dbxref=EnsemblGenomes-Gn:YE1178,EnsemblGenomes-Tr:CAL11271,InterPro:IPR014147,InterPro:IPR023220,UniProtKB/TrEMBL:A1JL48,NCBI_GP:CAL11271.1;Name=CAL11271.1;Note=Similar to Rhizobium sp. probable conjugal transfer protein TrbJ or Y4dA SWALL:TRBJ_RHISN (SWALL:P55400) (267 aa) fasta scores: E(): 6.9e-06%2C 27 38d in 200 aa%2C and to Escherichia coli%2C Comamonas testosteroni TrbJ SWALL:P71185 (EMBL:U67194) (254 aa) fasta scores: E(): 6.5e-50%2C 60.87 id in 253 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P55400;product=putative conjugal transfer protein;protein_id=CAL11271.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1319281	1319349	.	-	.	ID=id2200;Note=1 probable transmembrane helix predicted for YE1178 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1319687	1319917	.	-	.	ID=gene1176;Name=YE1179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1179
AM286415.1	EMBL	CDS	1319687	1319917	.	-	0	ID=cds1129;Parent=gene1176;Dbxref=EnsemblGenomes-Gn:YE1179,EnsemblGenomes-Tr:CAL11272,UniProtKB/TrEMBL:A1JL49,NCBI_GP:CAL11272.1;Name=CAL11272.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11272.1;transl_table=11
AM286415.1	EMBL	gene	1320077	1320742	.	+	.	ID=gene1177;Name=YE1180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1180
AM286415.1	EMBL	CDS	1320077	1320742	.	+	0	ID=cds1130;Parent=gene1177;Dbxref=EnsemblGenomes-Gn:YE1180,EnsemblGenomes-Tr:CAL11273,UniProtKB/TrEMBL:A1JL50,NCBI_GP:CAL11273.1;Name=CAL11273.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11273.1;transl_table=11
AM286415.1	EMBL	gene	1320959	1321228	.	-	.	ID=gene1178;Name=YE1181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1181
AM286415.1	EMBL	CDS	1320959	1321228	.	-	0	ID=cds1131;Parent=gene1178;Dbxref=EnsemblGenomes-Gn:YE1181,EnsemblGenomes-Tr:CAL11274,GOA:A1JL51,InterPro:IPR002145,InterPro:IPR010985,UniProtKB/TrEMBL:A1JL51,NCBI_GP:CAL11274.1;Name=CAL11274.1;Note=Similar to Xylella fastidiosa hypothetical protein Xf2075 SWALL:Q9PBR5 (EMBL:AE004023) (92 aa) fasta scores: E(): 1.1e-10%2C 42.85 38d in 77 aa and to Xanthomonas axonopodis hypothetical protein Xac2429 SWALL:AAM37280 (EMBL:AE011880) (92 aa) fasta scores: E(): 1.9e-10%2C 38.63 id in 88 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE011880;product=conserved hypothetical protein;protein_id=CAL11274.1;transl_table=11
AM286415.1	EMBL	gene	1321502	1322389	.	-	.	ID=gene1179;Name=YE1182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1182
AM286415.1	EMBL	CDS	1321502	1322389	.	-	0	ID=cds1132;Parent=gene1179;Dbxref=EnsemblGenomes-Gn:YE1182,EnsemblGenomes-Tr:CAL11275,InterPro:IPR010751,UniProtKB/TrEMBL:A1JL52,NCBI_GP:CAL11275.1;Name=CAL11275.1;Note=Similar to Escherichia coli plasmid TrfA transcriptional repressor protein SWALL:TRFA_ECOLI (SWALL:P07676) (382 aa) fasta scores: E(): 3.3e-06%2C 22.05 id in 263 aa and to Escherichia coli plasmid protein TrfA SWALL:Q52323 (EMBL:X00713) (285 aa) fasta scores: E(): 2.5e-06%2C 22.05 38d in 263 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P07676;product=putative plasmid-related transcriptional repressor protein;protein_id=CAL11275.1;transl_table=11
AM286415.1	EMBL	gene	1322394	1322774	.	-	.	ID=gene1180;Name=YE1183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1183
AM286415.1	EMBL	CDS	1322394	1322774	.	-	0	ID=cds1133;Parent=gene1180;Dbxref=EnsemblGenomes-Gn:YE1183,EnsemblGenomes-Tr:CAL11276,UniProtKB/TrEMBL:A1JL53,NCBI_GP:CAL11276.1;Name=CAL11276.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11276.1;transl_table=11
AM286415.1	EMBL	repeat_region	1322981	1323148	.	+	.	ID=id2201;Note=Direct repeat flanking low GC region%2C possible integrated plasmid%2C 168mer;gbkey=repeat_region
AM286415.1	EMBL	pseudogene	1322982	1323164	.	+	.	ID=gene1181;Name=YE1184;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1184;pseudo=true
AM286415.1	EMBL	CDS	1322982	1323164	.	+	0	ID=cds1134;Parent=gene1181;Note=Similar to the C-terminus of many proposed acetyltransferases including: Yersinia pestis putative acetyltransferase Ypo3031 SWALL:Q8ZCG0 (EMBL:AJ414155) (141 aa) fasta scores: E(): 1e-22%2C 100 38d in 60 aa%2CSalmonella typhimurium putative acetyltransferase Stm2449 SWALL:Q8ZN84 (EMBL:AE008810) (178 aa) fasta scores: E(): 3.8e-16%2C 69.69 38d in 66 aa and Escherichia coli hypothetical protein YpeA or b2434 SWALL:YPEA_ECOLI (SWALL:P76539) (141 aa) fasta scores: E(): 6.2e-15%2C 68.18 id in 66 aa. Note this CDS remnant borders a possible integrated plasmid and is likely to have been formed following a partial duplication of CDS YE1169 which lies at the other side of the integration site;gbkey=CDS;inference=similar to sequence:UniProtKB:P76539;product=putative acetyltransferase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	1323318	1323731	.	-	.	ID=gene1182;Name=ygiW;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=YE1185
AM286415.1	EMBL	CDS	1323318	1323731	.	-	0	ID=cds1135;Parent=gene1182;Dbxref=EnsemblGenomes-Gn:YE1185,EnsemblGenomes-Tr:CAL11278,InterPro:IPR005220,InterPro:IPR016052,UniProtKB/TrEMBL:A1JL54,NCBI_GP:CAL11278.1;Name=CAL11278.1;gbkey=CDS;gene=ygiW;product=putative exported protein;protein_id=CAL11278.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1323435	1323455	.	-	.	ID=id2202;Note=PS00307 Legume lectins beta-chain signature.;gbkey=misc_feature;gene=ygiW;inference=protein motif:Prosite:PS00307
AM286415.1	EMBL	gene	1324114	1324725	.	+	.	ID=gene1183;Name=yfeY;gbkey=Gene;gene=yfeY;gene_biotype=protein_coding;locus_tag=YE1186
AM286415.1	EMBL	CDS	1324114	1324725	.	+	0	ID=cds1136;Parent=gene1183;Dbxref=EnsemblGenomes-Gn:YE1186,EnsemblGenomes-Tr:CAL11279,InterPro:IPR010938,UniProtKB/TrEMBL:A1JL56,NCBI_GP:CAL11279.1;Name=CAL11279.1;gbkey=CDS;gene=yfeY;product=putative lipoprotein;protein_id=CAL11279.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1324147	1324215	.	+	.	ID=id2203;Note=1 probable transmembrane helix predicted for YE1186 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;gene=yfeY;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1324153	1324185	.	+	.	ID=id2204;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yfeY;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1324901	1325806	.	+	.	ID=gene1184;Name=YE1187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1187
AM286415.1	EMBL	CDS	1324901	1325806	.	+	0	ID=cds1137;Parent=gene1184;Dbxref=EnsemblGenomes-Gn:YE1187,EnsemblGenomes-Tr:CAL11280,GOA:A1JL57,InterPro:IPR006314,InterPro:IPR011008,UniProtKB/TrEMBL:A1JL57,NCBI_GP:CAL11280.1;Name=CAL11280.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11280.1;transl_table=11
AM286415.1	EMBL	gene	1325879	1326769	.	-	.	ID=gene1185;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;gene_synonym=npl;locus_tag=YE1188
AM286415.1	EMBL	CDS	1325879	1326769	.	-	0	ID=cds1138;Parent=gene1185;Dbxref=EnsemblGenomes-Gn:YE1188,EnsemblGenomes-Tr:CAL11281,GOA:A1JL58,InterPro:IPR002220,InterPro:IPR013785,InterPro:IPR020624,UniProtKB/TrEMBL:A1JL58,NCBI_GP:CAL11281.1;Name=CAL11281.1;gbkey=CDS;gene=nanA;product=probable N-acetylneuraminate lyase;protein_id=CAL11281.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1325888	1326763	.	-	.	ID=id2205;Note=Pfam match to entry PF00701 DHDPS%2CDihydrodipicolinate synthetase family%2C score 119.3%2CE-value 4.6e-33;gbkey=misc_feature;gene=nanA;inference=protein motif:PFAM:PF00701
AM286415.1	EMBL	sequence_feature	1326599	1326652	.	-	.	ID=id2206;Note=PS00665 Dihydrodipicolinate synthetase signature 1.;gbkey=misc_feature;gene=nanA;inference=protein motif:Prosite:PS00665
AM286415.1	EMBL	gene	1326851	1327486	.	-	.	ID=gene1186;Name=YE1189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1189
AM286415.1	EMBL	CDS	1326851	1327486	.	-	0	ID=cds1139;Parent=gene1186;Dbxref=EnsemblGenomes-Gn:YE1189,EnsemblGenomes-Tr:CAL11282,GOA:A1JL59,InterPro:IPR007260,InterPro:IPR011060,InterPro:IPR013785,UniProtKB/TrEMBL:A1JL59,NCBI_GP:CAL11282.1;Name=CAL11282.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11282.1;transl_table=11
AM286415.1	EMBL	gene	1327796	1328710	.	+	.	ID=gene1187;Name=YE1190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1190
AM286415.1	EMBL	CDS	1327796	1328710	.	+	0	ID=cds1140;Parent=gene1187;Dbxref=EnsemblGenomes-Gn:YE1190,EnsemblGenomes-Tr:CAL11283,GOA:A1JL60,InterPro:IPR000600,InterPro:IPR023945,UniProtKB/TrEMBL:A1JL60,NCBI_GP:CAL11283.1;Name=CAL11283.1;gbkey=CDS;product=putative sugar kinase;protein_id=CAL11283.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1327811	1328380	.	+	.	ID=id2207;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 184.8%2C E-value 8.7e-53;gbkey=misc_feature;inference=protein motif:PFAM:PF00480
AM286415.1	EMBL	sequence_feature	1328216	1328299	.	+	.	ID=id2208;Note=PS01125 ROK family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01125
AM286415.1	EMBL	gene	1328792	1329202	.	+	.	ID=gene1188;Name=YE1191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1191
AM286415.1	EMBL	CDS	1328792	1329202	.	+	0	ID=cds1141;Parent=gene1188;Dbxref=EnsemblGenomes-Gn:YE1191,EnsemblGenomes-Tr:CAL11284,InterPro:IPR004375,UniProtKB/TrEMBL:A1JL62,NCBI_GP:CAL11284.1;Name=CAL11284.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11284.1;transl_table=11
AM286415.1	EMBL	gene	1329398	1330276	.	+	.	ID=gene1189;Name=YE1192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1192
AM286415.1	EMBL	CDS	1329398	1330276	.	+	0	ID=cds1142;Parent=gene1189;Dbxref=EnsemblGenomes-Gn:YE1192,EnsemblGenomes-Tr:CAL11285,GOA:A1JL63,InterPro:IPR000281,InterPro:IPR001347,InterPro:IPR009057,InterPro:IPR011991,UniProtKB/TrEMBL:A1JL63,NCBI_GP:CAL11285.1;Name=CAL11285.1;gbkey=CDS;product=putative rpiR-family transcriptional regulatory protein;protein_id=CAL11285.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1329428	1329757	.	+	.	ID=id2209;Note=Pfam match to entry PF01418 HTH_6%2C Helix-turn-helix domain%2C rpiR family%2C score 114.3%2C E-value 1.5e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF01418
AM286415.1	EMBL	sequence_feature	1329803	1330210	.	+	.	ID=id2210;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 135.7%2C E-value 5.4e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	gene	1330685	1332157	.	+	.	ID=gene1190;Name=nanT;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=YE1193
AM286415.1	EMBL	CDS	1330685	1332157	.	+	0	ID=cds1143;Parent=gene1190;Dbxref=EnsemblGenomes-Gn:YE1193,EnsemblGenomes-Tr:CAL11286,GOA:A1JL65,InterPro:IPR005828,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JL65,NCBI_GP:CAL11286.1;Name=CAL11286.1;gbkey=CDS;gene=nanT;product=putative sugar transporter;protein_id=CAL11286.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1330721	1332079	.	+	.	ID=id2211;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 77.2%2C E-value 2.3e-20;gbkey=misc_feature;gene=nanT;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	1330727	1330792	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	1330811	1330879	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	1330937	1331005	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	1331096	1331164	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	1331174	1331233	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	1331327	1331395	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	1331408	1331476	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	1331495	1331563	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	1331621	1331680	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	1331714	1331782	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	1331792	1331860	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	1331885	1331953	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	1331963	1332031	.	+	.	ID=id2212;Note=13 probable transmembrane helices predicted for YE1193 by TMHMM2.0 at aa 15-36%2C 43-65%2C 85-107%2C 138-160%2C164-183%2C 215-237%2C 242-264%2C 271-293%2C 313-332%2C 344-366%2C370-392%2C 401-423 and 427-449;gbkey=misc_feature;gene=nanT;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	sequence_feature	1330937	1330969	.	+	.	ID=id2213;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nanT;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1331366	1331398	.	+	.	ID=id2214;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nanT;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1331627	1331659	.	+	.	ID=id2215;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nanT;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1332509	1333444	.	+	.	ID=gene1191;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=YE1194
AM286415.1	EMBL	CDS	1332509	1333444	.	+	0	ID=cds1144;Parent=gene1191;Dbxref=EnsemblGenomes-Gn:YE1194,EnsemblGenomes-Tr:CAL11287,GOA:A1JL66,InterPro:IPR005669,UniProtKB/TrEMBL:A1JL66,NCBI_GP:CAL11287.1;Name=CAL11287.1;gbkey=CDS;gene=cysP;product=thiosulfate-binding protein;protein_id=CAL11287.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1332509	1333432	.	+	.	ID=id2216;Note=Pfam match to entry PF01100 Sulphate_bind%2CProkaryotic sulphate- and thiosulphate-binding protein %2Cscore 601.7%2C E-value 2.9e-178;gbkey=misc_feature;gene=cysP;inference=protein motif:PFAM:PF01100
AM286415.1	EMBL	gene	1333444	1334280	.	+	.	ID=gene1192;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=YE1195
AM286415.1	EMBL	CDS	1333444	1334280	.	+	0	ID=cds1145;Parent=gene1192;Dbxref=EnsemblGenomes-Gn:YE1195,EnsemblGenomes-Tr:CAL11288,GOA:A1JL67,InterPro:IPR000515,InterPro:IPR005667,InterPro:IPR011865,UniProtKB/TrEMBL:A1JL67,NCBI_GP:CAL11288.1;Name=CAL11288.1;gbkey=CDS;gene=cysT;product=sulfate transport system permease protein CysT;protein_id=CAL11288.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1333486	1333554	.	+	.	ID=id2217;Note=7 probable transmembrane helices predicted for YE1195 by TMHMM2.0 at aa 15-37%2C 64-86%2C 106-128%2C 135-157%2C189-206%2C 213-235 and 245-267;gbkey=misc_feature;gene=cysT;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1333633	1333701	.	+	.	ID=id2217;Note=7 probable transmembrane helices predicted for YE1195 by TMHMM2.0 at aa 15-37%2C 64-86%2C 106-128%2C 135-157%2C189-206%2C 213-235 and 245-267;gbkey=misc_feature;gene=cysT;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1333759	1333827	.	+	.	ID=id2217;Note=7 probable transmembrane helices predicted for YE1195 by TMHMM2.0 at aa 15-37%2C 64-86%2C 106-128%2C 135-157%2C189-206%2C 213-235 and 245-267;gbkey=misc_feature;gene=cysT;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1333846	1333914	.	+	.	ID=id2217;Note=7 probable transmembrane helices predicted for YE1195 by TMHMM2.0 at aa 15-37%2C 64-86%2C 106-128%2C 135-157%2C189-206%2C 213-235 and 245-267;gbkey=misc_feature;gene=cysT;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1334008	1334061	.	+	.	ID=id2217;Note=7 probable transmembrane helices predicted for YE1195 by TMHMM2.0 at aa 15-37%2C 64-86%2C 106-128%2C 135-157%2C189-206%2C 213-235 and 245-267;gbkey=misc_feature;gene=cysT;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1334080	1334148	.	+	.	ID=id2217;Note=7 probable transmembrane helices predicted for YE1195 by TMHMM2.0 at aa 15-37%2C 64-86%2C 106-128%2C 135-157%2C189-206%2C 213-235 and 245-267;gbkey=misc_feature;gene=cysT;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1334176	1334244	.	+	.	ID=id2217;Note=7 probable transmembrane helices predicted for YE1195 by TMHMM2.0 at aa 15-37%2C 64-86%2C 106-128%2C 135-157%2C189-206%2C 213-235 and 245-267;gbkey=misc_feature;gene=cysT;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	1333930	1334172	.	+	.	ID=id2218;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 79.9%2C E-value 3.3e-21;gbkey=misc_feature;gene=cysT;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	1333933	1334019	.	+	.	ID=id2219;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=cysT;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	1334280	1335155	.	+	.	ID=gene1193;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=YE1196
AM286415.1	EMBL	CDS	1334280	1335155	.	+	0	ID=cds1146;Parent=gene1193;Dbxref=EnsemblGenomes-Gn:YE1196,EnsemblGenomes-Tr:CAL11289,GOA:A1JL68,InterPro:IPR000515,InterPro:IPR005667,InterPro:IPR011866,UniProtKB/TrEMBL:A1JL68,NCBI_GP:CAL11289.1;Name=CAL11289.1;gbkey=CDS;gene=cysW;product=sulfate transport system permease protein CysW;protein_id=CAL11289.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1334340	1334408	.	+	.	ID=id2220;Note=6 probable transmembrane helices predicted for YE1196 by TMHMM2.0 at aa 21-43%2C 66-88%2C 101-123%2C 143-162%2C201-223 and 246-268;gbkey=misc_feature;gene=cysW;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1334475	1334543	.	+	.	ID=id2220;Note=6 probable transmembrane helices predicted for YE1196 by TMHMM2.0 at aa 21-43%2C 66-88%2C 101-123%2C 143-162%2C201-223 and 246-268;gbkey=misc_feature;gene=cysW;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1334580	1334648	.	+	.	ID=id2220;Note=6 probable transmembrane helices predicted for YE1196 by TMHMM2.0 at aa 21-43%2C 66-88%2C 101-123%2C 143-162%2C201-223 and 246-268;gbkey=misc_feature;gene=cysW;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1334706	1334765	.	+	.	ID=id2220;Note=6 probable transmembrane helices predicted for YE1196 by TMHMM2.0 at aa 21-43%2C 66-88%2C 101-123%2C 143-162%2C201-223 and 246-268;gbkey=misc_feature;gene=cysW;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1334880	1334948	.	+	.	ID=id2220;Note=6 probable transmembrane helices predicted for YE1196 by TMHMM2.0 at aa 21-43%2C 66-88%2C 101-123%2C 143-162%2C201-223 and 246-268;gbkey=misc_feature;gene=cysW;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1335015	1335083	.	+	.	ID=id2220;Note=6 probable transmembrane helices predicted for YE1196 by TMHMM2.0 at aa 21-43%2C 66-88%2C 101-123%2C 143-162%2C201-223 and 246-268;gbkey=misc_feature;gene=cysW;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1334781	1335023	.	+	.	ID=id2221;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 38.9%2C E-value 7.5e-09;gbkey=misc_feature;gene=cysW;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	1334784	1334870	.	+	.	ID=id2222;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=cysW;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	1335145	1336236	.	+	.	ID=gene1194;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=YE1197
AM286415.1	EMBL	CDS	1335145	1336236	.	+	0	ID=cds1147;Parent=gene1194;Dbxref=EnsemblGenomes-Gn:YE1197,EnsemblGenomes-Tr:CAL11290,GOA:A1JL69,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005666,InterPro:IPR008995,InterPro:IPR014769,InterPro:IPR017871,InterPro:IPR024765,InterPro:IPR027417,UniProtKB/TrEMBL:A1JL69,NCBI_GP:CAL11290.1;Name=CAL11290.1;gbkey=CDS;gene=cysA;product=sulfate transport ATP-binding protein;protein_id=CAL11290.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1335226	1335783	.	+	.	ID=id2223;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 246.2%2C E-value 2.9e-71;gbkey=misc_feature;gene=cysA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1335247	1335270	.	+	.	ID=id2224;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=cysA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1335553	1335597	.	+	.	ID=id2225;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=cysA;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	1336464	1337291	.	+	.	ID=gene1195;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=YE1198
AM286415.1	EMBL	CDS	1336464	1337291	.	+	0	ID=cds1148;Parent=gene1195;Dbxref=EnsemblGenomes-Gn:YE1198,EnsemblGenomes-Tr:CAL11291,GOA:A1JL70,InterPro:IPR001216,InterPro:IPR001926,InterPro:IPR005856,InterPro:IPR005858,UniProtKB/TrEMBL:A1JL70,NCBI_GP:CAL11291.1;Name=CAL11291.1;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=CAL11291.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1336464	1337255	.	+	.	ID=id2226;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 318.6%2CE-value 4.7e-93;gbkey=misc_feature;gene=cysM;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	sequence_feature	1336497	1336553	.	+	.	ID=id2227;Note=PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site.;gbkey=misc_feature;gene=cysM;inference=protein motif:Prosite:PS00901
AM286415.1	EMBL	gene	1337339	1339294	.	-	.	ID=gene1196;Name=YE1199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1199
AM286415.1	EMBL	CDS	1337339	1339294	.	-	0	ID=cds1149;Parent=gene1196;Dbxref=EnsemblGenomes-Gn:YE1199,EnsemblGenomes-Tr:CAL11292,GOA:A1JL71,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR003838,InterPro:IPR017871,InterPro:IPR017911,InterPro:IPR025857,InterPro:IPR027417,UniProtKB/TrEMBL:A1JL71,NCBI_GP:CAL11292.1;Name=CAL11292.1;gbkey=CDS;product=putative ABC transporter%2C ATP-binding protein;protein_id=CAL11292.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1337363	1337737	.	-	.	ID=id2228;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score 143.8%2C E-value 2e-40;gbkey=misc_feature;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	sequence_feature	1338410	1338478	.	-	.	ID=id2229;Note=4 probable transmembrane helices predicted for YE1199 by TMHMM2.0 at aa 273-295%2C 530-552%2C 575-597 and 612-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1337639	1337707	.	-	.	ID=id2229;Note=4 probable transmembrane helices predicted for YE1199 by TMHMM2.0 at aa 273-295%2C 530-552%2C 575-597 and 612-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1337504	1337572	.	-	.	ID=id2229;Note=4 probable transmembrane helices predicted for YE1199 by TMHMM2.0 at aa 273-295%2C 530-552%2C 575-597 and 612-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1337393	1337461	.	-	.	ID=id2229;Note=4 probable transmembrane helices predicted for YE1199 by TMHMM2.0 at aa 273-295%2C 530-552%2C 575-597 and 612-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	1338647	1339204	.	-	.	ID=id2230;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 204.7%2C E-value 9.5e-59;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1338827	1338871	.	-	.	ID=id2231;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1339160	1339183	.	-	.	ID=id2232;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1339325	1340533	.	-	.	ID=gene1197;Name=YE1200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1200
AM286415.1	EMBL	CDS	1339325	1340533	.	-	0	ID=cds1150;Parent=gene1197;Dbxref=EnsemblGenomes-Gn:YE1200,EnsemblGenomes-Tr:CAL11293,GOA:A1JL72,InterPro:IPR006143,UniProtKB/TrEMBL:A1JL72,NCBI_GP:CAL11293.1;Name=CAL11293.1;gbkey=CDS;product=putative HlyD family secretion protein;protein_id=CAL11293.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1339391	1340350	.	-	.	ID=id2233;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 19.3%2C E-value 0.0001;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	sequence_feature	1340444	1340497	.	-	.	ID=id2234;Note=1 probable transmembrane helix predicted for YE1200 by TMHMM2.0 at aa 13-30;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1340722	1341405	.	+	.	ID=gene1198;Name=YE1201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1201
AM286415.1	EMBL	CDS	1340722	1341405	.	+	0	ID=cds1151;Parent=gene1198;Dbxref=EnsemblGenomes-Gn:YE1201,EnsemblGenomes-Tr:CAL11294,GOA:A1JL76,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JL76,NCBI_GP:CAL11294.1;Name=CAL11294.1;gbkey=CDS;product=putative two-component system response regulator;protein_id=CAL11294.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1340722	1341078	.	+	.	ID=id2235;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 119.9%2C E-value 3.1e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	1341082	1341126	.	+	.	ID=id2236;Note=PS01121 Caspase family histidine active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS01121
AM286415.1	EMBL	sequence_feature	1341172	1341390	.	+	.	ID=id2237;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 78.3%2C E-value 1e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	gene	1341431	1342798	.	+	.	ID=gene1199;Name=YE1202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1202
AM286415.1	EMBL	CDS	1341431	1342798	.	+	0	ID=cds1152;Parent=gene1199;Dbxref=EnsemblGenomes-Gn:YE1202,EnsemblGenomes-Tr:CAL11295,GOA:A1JL81,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB/TrEMBL:A1JL81,NCBI_GP:CAL11295.1;Name=CAL11295.1;gbkey=CDS;product=putative two-component system sensor kinase;protein_id=CAL11295.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1341458	1341526	.	+	.	ID=id2238;Note=2 probable transmembrane helices predicted for YE1202 by TMHMM2.0 at aa 10-32 and 157-179;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1341899	1341967	.	+	.	ID=id2238;Note=2 probable transmembrane helices predicted for YE1202 by TMHMM2.0 at aa 10-32 and 157-179;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	1341896	1342114	.	+	.	ID=id2239;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 59.0%2C E-value 6.6e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	1342124	1342315	.	+	.	ID=id2240;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 57.7%2C E-value 1.6e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	1342454	1342783	.	+	.	ID=id2241;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 112.0%2C E-value 7.4e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	repeat_region	1342804	1344106	.	-	.	ID=id2242;Note=Insertion sequence element IS1669;gbkey=repeat_region
AM286415.1	EMBL	gene	1342839	1343636	.	-	.	ID=gene1200;Name=YE1203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1203
AM286415.1	EMBL	CDS	1342839	1343636	.	-	0	ID=cds1153;Parent=gene1200;Dbxref=EnsemblGenomes-Gn:YE1203,EnsemblGenomes-Tr:CAL11296,GOA:A1JIJ9,InterPro:IPR001584,InterPro:IPR012337,UniProtKB/TrEMBL:A1JIJ9,NCBI_GP:CAL11296.1;Name=CAL11296.1;Note=Similar to Shigella sonnei insertion element IS600 hypothetical protein SWALL:YIS2_SHISO (SWALL:P16940) (272 aa) fasta scores: E(): 5.9e-25%2C 37.4 38d in 270 aa%2CPseudomonas aeruginosa hypothetical protein Pa0257 SWALL:Q9I6N2 (EMBL:AE004463) (263 aa) fasta scores: E(): 8.6e-70%2C 66.16 38d in 263 aa and to Porphyromonas gingivalis transposase Orf2 SWALL:Q9L796 (EMBL:AF224744) (312 aa) fasta scores: E(): 9.8e-27%2C 37.26 38d in 271 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P16940;product=putative transposase for insertion element IS1669;protein_id=CAL11296.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1342848	1343324	.	-	.	ID=id2243;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 121.4%2C E-value 1.1e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	1343654	1343968	.	-	.	ID=gene1201;Name=YE1204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1204
AM286415.1	EMBL	CDS	1343654	1343968	.	-	0	ID=cds1154;Parent=gene1201;Dbxref=EnsemblGenomes-Gn:YE1204,EnsemblGenomes-Tr:CAL11297,GOA:A1JL88,InterPro:IPR009057,UniProtKB/TrEMBL:A1JL88,NCBI_GP:CAL11297.1;Name=CAL11297.1;Note=Similar to Yersinia pestis hypothetical protein Ypo2009A SWALL:Q8ZEY6 (EMBL:AJ414151) (104 aa) fasta scores: E(): 2e-30%2C 86.53 38d in 104 aa%2C and in part to Salmonella typhimurium putative cytoplasmic protein stm0948 SWALL:Q8ZQE1 (EMBL:AE008740) (133 aa) fasta scores: E(): 3.9e-16%2C 53 38d in 100 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=IS1669 hypothetical protein;protein_id=CAL11297.1;transl_table=11
AM286415.1	EMBL	gene	1344156	1344665	.	-	.	ID=gene1202;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;gene_synonym=gsr,iex,tgs,treD;locus_tag=YE1205
AM286415.1	EMBL	CDS	1344156	1344665	.	-	0	ID=cds1155;Parent=gene1202;Dbxref=EnsemblGenomes-Gn:YE1205,EnsemblGenomes-Tr:CAL11298,GOA:A1JL89,InterPro:IPR001127,InterPro:IPR011055,UniProtKB/TrEMBL:A1JL89,NCBI_GP:CAL11298.1;Name=CAL11298.1;gbkey=CDS;gene=crr;product=PTS system%2C glucose-specific IIA component;protein_id=CAL11298.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1344237	1344551	.	-	.	ID=id2244;Note=Pfam match to entry PF00358 PTS_EIIA_1%2Cphosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 1%2C score 223.8%2C E-value 1.7e-64;gbkey=misc_feature;gene=crr;inference=protein motif:PFAM:PF00358
AM286415.1	EMBL	sequence_feature	1344375	1344413	.	-	.	ID=id2245;Note=PS00371 PTS EIIA domains phosphorylation site signature 1.;gbkey=misc_feature;gene=crr;inference=protein motif:Prosite:PS00371
AM286415.1	EMBL	gene	1344714	1346441	.	-	.	ID=gene1203;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=YE1206
AM286415.1	EMBL	CDS	1344714	1346441	.	-	0	ID=cds1156;Parent=gene1203;Dbxref=EnsemblGenomes-Gn:YE1206,EnsemblGenomes-Tr:CAL11299,GOA:A1JL94,InterPro:IPR000121,InterPro:IPR006318,InterPro:IPR008279,InterPro:IPR008731,InterPro:IPR015813,InterPro:IPR018274,InterPro:IPR023151,InterPro:IPR024692,UniProtKB/TrEMBL:A1JL94,NCBI_GP:CAL11299.1;Name=CAL11299.1;gbkey=CDS;gene=ptsI;product=PTS sytem%2C enzyme I component;protein_id=CAL11299.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1344810	1345694	.	-	.	ID=id2246;Note=Pfam match to entry PF02896 PEP-utilizers_C%2CPEP-utilizing enzyme%2C TIM barrel domain%2C score 619.3%2CE-value 1.4e-183;gbkey=misc_feature;gene=ptsI;inference=protein motif:PFAM:PF02896
AM286415.1	EMBL	sequence_feature	1345047	1345103	.	-	.	ID=id2247;Note=PS00742 PEP-utilizing enzymes signature 2.;gbkey=misc_feature;gene=ptsI;inference=protein motif:Prosite:PS00742
AM286415.1	EMBL	sequence_feature	1345767	1346012	.	-	.	ID=id2248;Note=Pfam match to entry PF00391 PEP-utilizers%2CPEP-utilizing enzyme%2C mobile domain%2C score 120.7%2C E-value 1.8e-33;gbkey=misc_feature;gene=ptsI;inference=protein motif:PFAM:PF00391
AM286415.1	EMBL	sequence_feature	1345857	1345892	.	-	.	ID=id2249;Note=PS00370 PEP-utilizing enzymes phosphorylation site signature.;gbkey=misc_feature;gene=ptsI;inference=protein motif:Prosite:PS00370
AM286415.1	EMBL	gene	1346489	1346746	.	-	.	ID=gene1204;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;gene_synonym=hpr;locus_tag=YE1207
AM286415.1	EMBL	CDS	1346489	1346746	.	-	0	ID=cds1157;Parent=gene1204;Dbxref=EnsemblGenomes-Gn:YE1207,EnsemblGenomes-Tr:CAL11300,GOA:A1JL96,InterPro:IPR000032,InterPro:IPR001020,InterPro:IPR002114,UniProtKB/TrEMBL:A1JL96,NCBI_GP:CAL11300.1;Name=CAL11300.1;gbkey=CDS;gene=ptsH;product=PTS system%2C phosphocarrier protein;protein_id=CAL11300.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1346495	1346746	.	-	.	ID=id2250;Note=Pfam match to entry PF00381 PTS-HPr%2C PTS HPr component phosphorylation site%2C score 161.5%2C E-value 9.5e-46;gbkey=misc_feature;gene=ptsH;inference=protein motif:PFAM:PF00381
AM286415.1	EMBL	sequence_feature	1346585	1346632	.	-	.	ID=id2251;Note=PS00589 PTS HPR component serine phosphorylation site signature.;gbkey=misc_feature;gene=ptsH;inference=protein motif:Prosite:PS00589
AM286415.1	EMBL	sequence_feature	1346687	1346710	.	-	.	ID=id2252;Note=PS00369 PTS HPR component histidine phosphorylation site signature.;gbkey=misc_feature;gene=ptsH;inference=protein motif:Prosite:PS00369
AM286415.1	EMBL	gene	1347198	1348166	.	-	.	ID=gene1205;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;gene_synonym=cysZ;locus_tag=YE1208
AM286415.1	EMBL	CDS	1347198	1348166	.	-	0	ID=cds1158;Parent=gene1205;Dbxref=EnsemblGenomes-Gn:YE1208,EnsemblGenomes-Tr:CAL11301,GOA:A1JL97,InterPro:IPR001216,InterPro:IPR001926,InterPro:IPR005856,InterPro:IPR005859,UniProtKB/TrEMBL:A1JL97,NCBI_GP:CAL11301.1;Name=CAL11301.1;gbkey=CDS;gene=cysK;product=cysteine synthase A;protein_id=CAL11301.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1347264	1348145	.	-	.	ID=id2253;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 437.4%2CE-value 8e-129;gbkey=misc_feature;gene=cysK;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	sequence_feature	1348020	1348076	.	-	.	ID=id2254;Note=PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site.;gbkey=misc_feature;gene=cysK;inference=protein motif:Prosite:PS00901
AM286415.1	EMBL	gene	1348362	1349033	.	-	.	ID=gene1206;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=YE1209
AM286415.1	EMBL	CDS	1348362	1349033	.	-	0	ID=cds1159;Parent=gene1206;Dbxref=EnsemblGenomes-Gn:YE1209,EnsemblGenomes-Tr:CAL11302,UniProtKB/TrEMBL:A1JL98,NCBI_GP:CAL11302.1;Name=CAL11302.1;gbkey=CDS;gene=cysZ;product=putative membrane protein;protein_id=CAL11302.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1348953	1349021	.	-	.	ID=id2255;Note=4 probable transmembrane helices predicted for YE1209 by TMHMM2.0 at aa 5-27%2C 42-64%2C 120-142 and 183-205;gbkey=misc_feature;gene=cysZ;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1348842	1348910	.	-	.	ID=id2255;Note=4 probable transmembrane helices predicted for YE1209 by TMHMM2.0 at aa 5-27%2C 42-64%2C 120-142 and 183-205;gbkey=misc_feature;gene=cysZ;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1348608	1348676	.	-	.	ID=id2255;Note=4 probable transmembrane helices predicted for YE1209 by TMHMM2.0 at aa 5-27%2C 42-64%2C 120-142 and 183-205;gbkey=misc_feature;gene=cysZ;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1348419	1348487	.	-	.	ID=id2255;Note=4 probable transmembrane helices predicted for YE1209 by TMHMM2.0 at aa 5-27%2C 42-64%2C 120-142 and 183-205;gbkey=misc_feature;gene=cysZ;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1349310	1350332	.	+	.	ID=gene1207;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=YE1210
AM286415.1	EMBL	CDS	1349310	1350332	.	+	0	ID=cds1160;Parent=gene1207;Dbxref=EnsemblGenomes-Gn:YE1210,EnsemblGenomes-Tr:CAL11303,GOA:A1JLA1,InterPro:IPR007449,InterPro:IPR011919,UniProtKB/TrEMBL:A1JLA1,NCBI_GP:CAL11303.1;Name=CAL11303.1;gbkey=CDS;gene=zipA;product=putative cell division protein;protein_id=CAL11303.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1349367	1349426	.	+	.	ID=id2256;Note=1 probable transmembrane helix predicted for YE1210 by TMHMM2.0 at aa 20-39;gbkey=misc_feature;gene=zipA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1350408	1352426	.	+	.	ID=gene1208;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;gene_synonym=dnaL,lig,lop,pdeC;locus_tag=YE1211
AM286415.1	EMBL	CDS	1350408	1352426	.	+	0	ID=cds1161;Parent=gene1208;Dbxref=EnsemblGenomes-Gn:YE1211,EnsemblGenomes-Tr:CAL11304,GOA:A1JLA4,InterPro:IPR001357,InterPro:IPR001679,InterPro:IPR003583,InterPro:IPR004149,InterPro:IPR004150,InterPro:IPR010994,InterPro:IPR012340,InterPro:IPR013839,InterPro:IPR013840,InterPro:IPR018239,NCBI_GP:CAL11304.1;Name=CAL11304.1;gbkey=CDS;gene=ligA;product=DNA ligase;protein_id=CAL11304.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1350411	1351361	.	+	.	ID=id2257;Note=Pfam match to entry PF01653 DNA_ligase_N%2CNAD-dependent DNA ligase adenylation domain%2C score 681.6%2CE-value 2.6e-202;gbkey=misc_feature;gene=ligA;inference=protein motif:PFAM:PF01653
AM286415.1	EMBL	sequence_feature	1350750	1350839	.	+	.	ID=id2258;Note=PS01055 NAD-dependent DNA ligase signature 1.;gbkey=misc_feature;gene=ligA;inference=protein motif:Prosite:PS01055
AM286415.1	EMBL	sequence_feature	1351365	1351613	.	+	.	ID=id2259;Note=Pfam match to entry PF03120 DNA_ligase_OB%2CNAD-dependent DNA ligase OB-fold domain%2C score 179.2%2CE-value 4.5e-51;gbkey=misc_feature;gene=ligA;inference=protein motif:PFAM:PF03120
AM286415.1	EMBL	sequence_feature	1351398	1351445	.	+	.	ID=id2260;Note=PS01056 NAD-dependent DNA ligase signature 2.;gbkey=misc_feature;gene=ligA;inference=protein motif:Prosite:PS01056
AM286415.1	EMBL	sequence_feature	1351623	1351709	.	+	.	ID=id2261;Note=Pfam match to entry PF03119 DNA_ligase_ZBD%2CNAD-dependent DNA ligase C4 zinc finger domain%2C score 50.9%2C E-value 1.8e-12;gbkey=misc_feature;gene=ligA;inference=protein motif:PFAM:PF03119
AM286415.1	EMBL	sequence_feature	1352007	1352096	.	+	.	ID=id2262;Note=Pfam match to entry PF00633 HHH%2CHelix-hairpin-helix motif%2C score 22.5%2C E-value 5.7e-06;gbkey=misc_feature;gene=ligA;inference=protein motif:PFAM:PF00633
AM286415.1	EMBL	sequence_feature	1352187	1352420	.	+	.	ID=id2263;Note=Pfam match to entry PF00533 BRCT%2C BRCA1 C Terminus (BRCT) domain%2C score 53.4%2C E-value 3.2e-13;gbkey=misc_feature;gene=ligA;inference=protein motif:PFAM:PF00533
AM286415.1	EMBL	gene	1352441	1352659	.	+	.	ID=gene1209;Name=YE1212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1212
AM286415.1	EMBL	CDS	1352441	1352659	.	+	0	ID=cds1162;Parent=gene1209;Dbxref=EnsemblGenomes-Gn:YE1212,EnsemblGenomes-Tr:CAL11305,InterPro:IPR024530,UniProtKB/TrEMBL:A1JLA8,NCBI_GP:CAL11305.1;Name=CAL11305.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11305.1;transl_table=11
AM286415.1	EMBL	gene	1352849	1353190	.	-	.	ID=gene1210;Name=YE1213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1213
AM286415.1	EMBL	CDS	1352849	1353190	.	-	0	ID=cds1163;Parent=gene1210;Dbxref=EnsemblGenomes-Gn:YE1213,EnsemblGenomes-Tr:CAL11306,InterPro:IPR025577,UniProtKB/TrEMBL:A1JLA9,NCBI_GP:CAL11306.1;Name=CAL11306.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11306.1;transl_table=11
AM286415.1	EMBL	gene	1353347	1353907	.	-	.	ID=gene1211;Name=YE1214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1214
AM286415.1	EMBL	CDS	1353347	1353907	.	-	0	ID=cds1164;Parent=gene1211;Dbxref=EnsemblGenomes-Gn:YE1214,EnsemblGenomes-Tr:CAL11307,InterPro:IPR009267,UniProtKB/TrEMBL:A1JLB0,NCBI_GP:CAL11307.1;Name=CAL11307.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11307.1;transl_table=11
AM286415.1	EMBL	gene	1354016	1354091	.	-	.	ID=gene1212;Name=tRNA-Ala (GGC);gbkey=Gene;gene=tRNA-Ala (GGC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1354016	1354091	.	-	.	ID=rna57;Parent=gene1212;gbkey=tRNA;gene=tRNA-Ala (GGC);product=tRNA-Ala
AM286415.1	EMBL	exon	1354016	1354091	.	-	.	ID=id2264;Parent=rna57;gbkey=tRNA;gene=tRNA-Ala (GGC);product=tRNA-Ala
AM286415.1	EMBL	gene	1354171	1354246	.	-	.	ID=gene1213;Name=tRNA-Ala (GGC);gbkey=Gene;gene=tRNA-Ala (GGC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1354171	1354246	.	-	.	ID=rna58;Parent=gene1213;gbkey=tRNA;gene=tRNA-Ala (GGC);product=tRNA-Ala
AM286415.1	EMBL	exon	1354171	1354246	.	-	.	ID=id2265;Parent=rna58;gbkey=tRNA;gene=tRNA-Ala (GGC);product=tRNA-Ala
AM286415.1	EMBL	gene	1354417	1355832	.	-	.	ID=gene1214;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=YE1215
AM286415.1	EMBL	CDS	1354417	1355832	.	-	0	ID=cds1165;Parent=gene1214;Dbxref=EnsemblGenomes-Gn:YE1215,EnsemblGenomes-Tr:CAL11308,GOA:A1JLB3,InterPro:IPR000924,InterPro:IPR001412,InterPro:IPR004527,InterPro:IPR008925,InterPro:IPR014729,InterPro:IPR020058,InterPro:IPR020061,InterPro:IPR020751,NCBI_GP:CAL11308.1;Name=CAL11308.1;gbkey=CDS;gene=gltX;product=glutamyl-tRNA synthetase;protein_id=CAL11308.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1354918	1355829	.	-	.	ID=id2266;Note=Pfam match to entry PF00749 tRNA-synt_1c%2C tRNA synthetases class I (E and Q)%2C catalytic domain%2C score 580.9%2C E-value 5.4e-172;gbkey=misc_feature;gene=gltX;inference=protein motif:PFAM:PF00749
AM286415.1	EMBL	sequence_feature	1355773	1355808	.	-	.	ID=id2267;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=gltX;inference=protein motif:Prosite:PS00178
AM286415.1	EMBL	gene	1356094	1356169	.	+	.	ID=gene1215;Name=tRNA-Val (TAC);gbkey=Gene;gene=tRNA-Val (TAC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1356094	1356169	.	+	.	ID=rna59;Parent=gene1215;gbkey=tRNA;gene=tRNA-Val (TAC);product=tRNA-Val
AM286415.1	EMBL	exon	1356094	1356169	.	+	.	ID=id2268;Parent=rna59;gbkey=tRNA;gene=tRNA-Val (TAC);product=tRNA-Val
AM286415.1	EMBL	gene	1356224	1356299	.	+	.	ID=gene1216;Name=tRNA-Val (TAC);gbkey=Gene;gene=tRNA-Val (TAC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1356224	1356299	.	+	.	ID=rna60;Parent=gene1216;gbkey=tRNA;gene=tRNA-Val (TAC);product=tRNA-Val
AM286415.1	EMBL	exon	1356224	1356299	.	+	.	ID=id2269;Parent=rna60;gbkey=tRNA;gene=tRNA-Val (TAC);product=tRNA-Val
AM286415.1	EMBL	gene	1356339	1356414	.	+	.	ID=gene1217;Name=tRNA-Val (TAC);gbkey=Gene;gene=tRNA-Val (TAC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1356339	1356414	.	+	.	ID=rna61;Parent=gene1217;gbkey=tRNA;gene=tRNA-Val (TAC);product=tRNA-Val
AM286415.1	EMBL	exon	1356339	1356414	.	+	.	ID=id2270;Parent=rna61;gbkey=tRNA;gene=tRNA-Val (TAC);product=tRNA-Val
AM286415.1	EMBL	gene	1356606	1356681	.	+	.	ID=gene1218;Name=tRNA-Lys (TTT);gbkey=Gene;gene=tRNA-Lys (TTT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1356606	1356681	.	+	.	ID=rna62;Parent=gene1218;gbkey=tRNA;gene=tRNA-Lys (TTT);product=tRNA-Lys
AM286415.1	EMBL	exon	1356606	1356681	.	+	.	ID=id2271;Parent=rna62;gbkey=tRNA;gene=tRNA-Lys (TTT);product=tRNA-Lys
AM286415.1	EMBL	transcript	1356689	1356852	.	+	.	ID=rna63;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 38.58%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	exon	1356689	1356852	.	+	.	ID=id2272;Parent=rna63;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 38.58%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	transcript	1356860	1357023	.	+	.	ID=rna64;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 38.58%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	exon	1356860	1357023	.	+	.	ID=id2273;Parent=rna64;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 38.58%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	gene	1357395	1358579	.	-	.	ID=gene1219;Name=nupC;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;gene_synonym=cru;locus_tag=YE1217
AM286415.1	EMBL	CDS	1357395	1358579	.	-	0	ID=cds1166;Parent=gene1219;Dbxref=EnsemblGenomes-Gn:YE1217,EnsemblGenomes-Tr:CAL11309,GOA:A1JLB8,InterPro:IPR002668,InterPro:IPR008276,InterPro:IPR011657,InterPro:IPR018270,UniProtKB/TrEMBL:A1JLB8,NCBI_GP:CAL11309.1;Name=CAL11309.1;gbkey=CDS;gene=nupC;product=nucleoside permease;protein_id=CAL11309.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1357398	1358576	.	-	.	ID=id2274;Note=Pfam match to entry PF01773 Nucleoside_tra2%2C Na+ dependent nucleoside transporter%2C score 655.8%2C E-value 1.4e-194;gbkey=misc_feature;gene=nupC;inference=protein motif:PFAM:PF01773
AM286415.1	EMBL	sequence_feature	1358517	1358570	.	-	.	ID=id2275;Note=10 probable transmembrane helices predicted for YE1217 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 89-111%2C166-188%2C 193-215%2C 241-263%2C 270-292%2C 336-358 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1358430	1358498	.	-	.	ID=id2275;Note=10 probable transmembrane helices predicted for YE1217 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 89-111%2C166-188%2C 193-215%2C 241-263%2C 270-292%2C 336-358 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1358334	1358402	.	-	.	ID=id2275;Note=10 probable transmembrane helices predicted for YE1217 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 89-111%2C166-188%2C 193-215%2C 241-263%2C 270-292%2C 336-358 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1358247	1358315	.	-	.	ID=id2275;Note=10 probable transmembrane helices predicted for YE1217 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 89-111%2C166-188%2C 193-215%2C 241-263%2C 270-292%2C 336-358 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1358016	1358084	.	-	.	ID=id2275;Note=10 probable transmembrane helices predicted for YE1217 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 89-111%2C166-188%2C 193-215%2C 241-263%2C 270-292%2C 336-358 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1357935	1358003	.	-	.	ID=id2275;Note=10 probable transmembrane helices predicted for YE1217 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 89-111%2C166-188%2C 193-215%2C 241-263%2C 270-292%2C 336-358 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1357791	1357859	.	-	.	ID=id2275;Note=10 probable transmembrane helices predicted for YE1217 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 89-111%2C166-188%2C 193-215%2C 241-263%2C 270-292%2C 336-358 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1357704	1357772	.	-	.	ID=id2275;Note=10 probable transmembrane helices predicted for YE1217 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 89-111%2C166-188%2C 193-215%2C 241-263%2C 270-292%2C 336-358 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1357506	1357574	.	-	.	ID=id2275;Note=10 probable transmembrane helices predicted for YE1217 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 89-111%2C166-188%2C 193-215%2C 241-263%2C 270-292%2C 336-358 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1357401	1357469	.	-	.	ID=id2275;Note=10 probable transmembrane helices predicted for YE1217 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 89-111%2C166-188%2C 193-215%2C 241-263%2C 270-292%2C 336-358 and 371-393;gbkey=misc_feature;gene=nupC;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	1358978	1360207	.	+	.	ID=gene1220;Name=mntH;gbkey=Gene;gene=mntH;gene_biotype=protein_coding;locus_tag=YE1219
AM286415.1	EMBL	CDS	1358978	1360207	.	+	0	ID=cds1167;Parent=gene1220;Dbxref=EnsemblGenomes-Gn:YE1219,EnsemblGenomes-Tr:CAL11310,GOA:A1JLC3,InterPro:IPR001046,NCBI_GP:CAL11310.1;Name=CAL11310.1;gbkey=CDS;gene=mntH;product=manganese transport protein MntH;protein_id=CAL11310.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1359026	1359094	.	+	.	ID=id2276;Note=10 probable transmembrane helices predicted for YE1219 by TMHMM2.0 at aa 17-39%2C 54-76%2C 96-118%2C 123-145%2C152-174%2C 196-218%2C 239-261%2C 287-309%2C 348-370 and 385-407;gbkey=misc_feature;gene=mntH;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1359137	1359205	.	+	.	ID=id2276;Note=10 probable transmembrane helices predicted for YE1219 by TMHMM2.0 at aa 17-39%2C 54-76%2C 96-118%2C 123-145%2C152-174%2C 196-218%2C 239-261%2C 287-309%2C 348-370 and 385-407;gbkey=misc_feature;gene=mntH;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1359263	1359331	.	+	.	ID=id2276;Note=10 probable transmembrane helices predicted for YE1219 by TMHMM2.0 at aa 17-39%2C 54-76%2C 96-118%2C 123-145%2C152-174%2C 196-218%2C 239-261%2C 287-309%2C 348-370 and 385-407;gbkey=misc_feature;gene=mntH;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1359344	1359412	.	+	.	ID=id2276;Note=10 probable transmembrane helices predicted for YE1219 by TMHMM2.0 at aa 17-39%2C 54-76%2C 96-118%2C 123-145%2C152-174%2C 196-218%2C 239-261%2C 287-309%2C 348-370 and 385-407;gbkey=misc_feature;gene=mntH;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1359431	1359499	.	+	.	ID=id2276;Note=10 probable transmembrane helices predicted for YE1219 by TMHMM2.0 at aa 17-39%2C 54-76%2C 96-118%2C 123-145%2C152-174%2C 196-218%2C 239-261%2C 287-309%2C 348-370 and 385-407;gbkey=misc_feature;gene=mntH;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1359563	1359631	.	+	.	ID=id2276;Note=10 probable transmembrane helices predicted for YE1219 by TMHMM2.0 at aa 17-39%2C 54-76%2C 96-118%2C 123-145%2C152-174%2C 196-218%2C 239-261%2C 287-309%2C 348-370 and 385-407;gbkey=misc_feature;gene=mntH;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1359692	1359760	.	+	.	ID=id2276;Note=10 probable transmembrane helices predicted for YE1219 by TMHMM2.0 at aa 17-39%2C 54-76%2C 96-118%2C 123-145%2C152-174%2C 196-218%2C 239-261%2C 287-309%2C 348-370 and 385-407;gbkey=misc_feature;gene=mntH;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1359836	1359904	.	+	.	ID=id2276;Note=10 probable transmembrane helices predicted for YE1219 by TMHMM2.0 at aa 17-39%2C 54-76%2C 96-118%2C 123-145%2C152-174%2C 196-218%2C 239-261%2C 287-309%2C 348-370 and 385-407;gbkey=misc_feature;gene=mntH;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1360019	1360087	.	+	.	ID=id2276;Note=10 probable transmembrane helices predicted for YE1219 by TMHMM2.0 at aa 17-39%2C 54-76%2C 96-118%2C 123-145%2C152-174%2C 196-218%2C 239-261%2C 287-309%2C 348-370 and 385-407;gbkey=misc_feature;gene=mntH;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1360130	1360198	.	+	.	ID=id2276;Note=10 probable transmembrane helices predicted for YE1219 by TMHMM2.0 at aa 17-39%2C 54-76%2C 96-118%2C 123-145%2C152-174%2C 196-218%2C 239-261%2C 287-309%2C 348-370 and 385-407;gbkey=misc_feature;gene=mntH;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	1359089	1360129	.	+	.	ID=id2277;Note=Pfam match to entry PF01566 Nramp%2C Natural resistance-associated macrophage protein%2C score 599.2%2CE-value 1.6e-177;gbkey=misc_feature;gene=mntH;inference=protein motif:PFAM:PF01566
AM286415.1	EMBL	gene	1360258	1360686	.	-	.	ID=gene1221;Name=YE1220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1220
AM286415.1	EMBL	CDS	1360258	1360686	.	-	0	ID=cds1168;Parent=gene1221;Dbxref=EnsemblGenomes-Gn:YE1220,EnsemblGenomes-Tr:CAL11311,InterPro:IPR019638,UniProtKB/TrEMBL:A1JLC8,NCBI_GP:CAL11311.1;Name=CAL11311.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11311.1;transl_table=11
AM286415.1	EMBL	gene	1360857	1361846	.	-	.	ID=gene1222;Name=YE1221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1221
AM286415.1	EMBL	CDS	1360857	1361846	.	-	0	ID=cds1169;Parent=gene1222;Dbxref=EnsemblGenomes-Gn:YE1221,EnsemblGenomes-Tr:CAL11312,InterPro:IPR001395,InterPro:IPR023210,UniProtKB/TrEMBL:A1JLC9,NCBI_GP:CAL11312.1;Name=CAL11312.1;gbkey=CDS;product=putative ion channel protein;protein_id=CAL11312.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1360860	1361792	.	-	.	ID=id2278;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 200.6%2C E-value 1.5e-57;gbkey=misc_feature;inference=protein motif:PFAM:PF00248
AM286415.1	EMBL	gene	1362066	1363730	.	+	.	ID=gene1223;Name=ipdC;gbkey=Gene;gene=ipdC;gene_biotype=protein_coding;locus_tag=YE1222
AM286415.1	EMBL	CDS	1362066	1363730	.	+	0	ID=cds1170;Parent=gene1223;Dbxref=EnsemblGenomes-Gn:YE1222,EnsemblGenomes-Tr:CAL11313,GOA:A1JLD0,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012110,InterPro:IPR029035,InterPro:IPR029061,UniProtKB/TrEMBL:A1JLD0,NCBI_GP:CAL11313.1;Name=CAL11313.1;Note=Similar to Enterobacter cloacae indole-3-pyruvate decarboxylase involved in the production of the plant-like hormone indole-3-acetaldehyde (IAAld) IpdC SWALL:DCIP_ENTCL (SWALL:P23234) (552 aa) fasta scores: E(): 7.9e-113%2C 53.51 38d in 555 aa%2C and to Salmonella typhimurium putative indole-3-pyruvate decarboxylase IpD or Stm2405 SWALL:Q93IM7 (EMBL:AJ401270) (550 aa) fasta scores: E(): 3.2e-118%2C 56.18 38d in 550 aa;gbkey=CDS;gene=ipdC;inference=similar to sequence:UniProtKB:P23234;product=indole-3-pyruvate decarboxylase;protein_id=CAL11313.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1362075	1362608	.	+	.	ID=id2279;Note=Pfam match to entry PF02776 TPP_enzymes_N%2C Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain %2Cscore 195.9%2C E-value 4e-56;gbkey=misc_feature;gene=ipdC;inference=protein motif:PFAM:PF02776
AM286415.1	EMBL	sequence_feature	1362651	1363106	.	+	.	ID=id2280;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzyme%2C central domain%2C score 104.4%2CE-value 1.5e-28;gbkey=misc_feature;gene=ipdC;inference=protein motif:PFAM:PF00205
AM286415.1	EMBL	sequence_feature	1363131	1363652	.	+	.	ID=id2281;Note=Pfam match to entry PF02775 TPP_enzymes_C%2C Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain %2Cscore 199.3%2C E-value 3.8e-57;gbkey=misc_feature;gene=ipdC;inference=protein motif:PFAM:PF02775
AM286415.1	EMBL	gene	1363702	1364589	.	-	.	ID=gene1224;Name=YE1223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1223
AM286415.1	EMBL	CDS	1363702	1364589	.	-	0	ID=cds1171;Parent=gene1224;Dbxref=EnsemblGenomes-Gn:YE1223,EnsemblGenomes-Tr:CAL11314,GOA:A1JLD4,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JLD4,NCBI_GP:CAL11314.1;Name=CAL11314.1;gbkey=CDS;product=putative lysR-family transcriptional regulatory protein;protein_id=CAL11314.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1363726	1364328	.	-	.	ID=id2282;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 106.9%2C E-value 2.5e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	1364398	1364577	.	-	.	ID=id2283;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 71.7%2C E-value 1e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	1364473	1364538	.	-	.	ID=id2284;Note=Predicted helix-turn-helix motif with score 1575.000%2C SD 4.55 at aa 18-39%2C sequence GSFSAAARKLRKSQSTISTAIA;gbkey=misc_feature
AM286415.1	EMBL	gene	1364691	1365167	.	+	.	ID=gene1225;Name=YE1224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1224
AM286415.1	EMBL	CDS	1364691	1365167	.	+	0	ID=cds1172;Parent=gene1225;Dbxref=EnsemblGenomes-Gn:YE1224,EnsemblGenomes-Tr:CAL11315,InterPro:IPR007896,UniProtKB/TrEMBL:A1JLD5,NCBI_GP:CAL11315.1;Name=CAL11315.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11315.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1364724	1364792	.	+	.	ID=id2285;Note=4 probable transmembrane helices predicted for YE1224 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105 and 109-131;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1364820	1364879	.	+	.	ID=id2285;Note=4 probable transmembrane helices predicted for YE1224 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105 and 109-131;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1364937	1365005	.	+	.	ID=id2285;Note=4 probable transmembrane helices predicted for YE1224 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105 and 109-131;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1365015	1365083	.	+	.	ID=id2285;Note=4 probable transmembrane helices predicted for YE1224 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105 and 109-131;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1365353	1366324	.	+	.	ID=gene1226;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=YE1225
AM286415.1	EMBL	CDS	1365353	1366324	.	+	0	ID=cds1173;Parent=gene1226;Dbxref=EnsemblGenomes-Gn:YE1225,EnsemblGenomes-Tr:CAL11316,GOA:A1JLD7,InterPro:IPR003836,NCBI_GP:CAL11316.1;Name=CAL11316.1;gbkey=CDS;gene=glk;product=glucokinase;protein_id=CAL11316.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1365353	1366300	.	+	.	ID=id2286;Note=Pfam match to entry PF02685 Glucokinase%2CGlucokinase%2C score 692.6%2C E-value 1.3e-205;gbkey=misc_feature;gene=glk;inference=protein motif:PFAM:PF02685
AM286415.1	EMBL	gene	1366581	1367825	.	-	.	ID=gene1227;Name=YE1226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1226
AM286415.1	EMBL	CDS	1366581	1367825	.	-	0	ID=cds1174;Parent=gene1227;Dbxref=EnsemblGenomes-Gn:YE1226,EnsemblGenomes-Tr:CAL11317,GOA:A1JLD9,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JLD9,NCBI_GP:CAL11317.1;Name=CAL11317.1;Note=Similar to many including: Escherichia coli hypothetical protein YhjX or b3547 SWALL:YHJX_ECOLI (SWALL:P37662) (402 aa) fasta scores: E(): 8.8e-65%2C 44.24 id in 391 aa%2C and to Salmonella typhi putative transmembrane transport protein Sty2820 SWALL:Q8Z4K9 (EMBL:AL627275) (398 aa) fasta scores: E(): 2.9e-32%2C29.56 38d in 389 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37662;product=putative membrane transport protein;protein_id=CAL11317.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1366617	1367786	.	-	.	ID=id2287;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -105.9%2C E-value 0.0004;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	1367733	1367801	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1367637	1367705	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1367532	1367600	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1367454	1367522	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1367352	1367420	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1367274	1367342	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1367115	1367174	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1367004	1367072	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1366917	1366985	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1366836	1366904	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1366740	1366799	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1366662	1366730	.	-	.	ID=id2288;Note=12 probable transmembrane helices predicted for YE1226 by TMHMM2.0 at aa 9-31%2C 41-63%2C 76-98%2C 102-124%2C136-158%2C 162-184%2C 218-237%2C 252-274%2C 281-303%2C 308-330%2C343-362 and 366-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	1368049	1368789	.	-	.	ID=gene1228;Name=YE1227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1227
AM286415.1	EMBL	CDS	1368049	1368789	.	-	0	ID=cds1175;Parent=gene1228;Dbxref=EnsemblGenomes-Gn:YE1227,EnsemblGenomes-Tr:CAL11318,GOA:A1JLE2,InterPro:IPR001789,InterPro:IPR007492,InterPro:IPR011006,UniProtKB/TrEMBL:A1JLE2,NCBI_GP:CAL11318.1;Name=CAL11318.1;Note=Similar to many two-component system response-regulatory proteins including: Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR or Pa5261 SWALL:ALGR_PSEAE (SWALL:P26275) (248 aa) fasta scores: E(): 3.7e-11%2C 28.34 38d in 254 aa%2CEscherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YpdB or b2381 SWALL:YPDB_ECOLI (SWALL:P77742) (244 aa) fasta scores: E(): 6e-71%2C 74.19 id in 248 aa%2C and Bacillus subtilis autolysin response regulator LytT SWALL:P94514 (EMBL:Z75208) (241 aa) fasta scores: E(): 1.3e-25%2C 33.6 38d in 247 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77742;product=putative two-component system response-regulator;protein_id=CAL11318.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1368430	1368684	.	-	.	ID=id2289;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 19.1%2C E-value 1.8e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	1368793	1370493	.	-	.	ID=gene1229;Name=YE1228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1228
AM286415.1	EMBL	CDS	1368793	1370493	.	-	0	ID=cds1176;Parent=gene1229;Dbxref=EnsemblGenomes-Gn:YE1228,EnsemblGenomes-Tr:CAL11319,GOA:A1JLE4,InterPro:IPR003018,InterPro:IPR003594,InterPro:IPR010559,InterPro:IPR011620,InterPro:IPR029016,UniProtKB/TrEMBL:A1JLE4,NCBI_GP:CAL11319.1;Name=CAL11319.1;Note=Similar to many two-component system histidine kinases including: Fusobacterium nucleatum autolysin sensor kinase fn0220 SWALL:AAL94426 (EMBL:AE010534) (541 aa) fasta scores: E(): 3.2e-77%2C 42.08 38d in 537 aa%2C and to Staphylococcus aureus two-component sensor histidine kinase lyts or sav0260 or sa0250 or mw0236 SWALL:Q99WW3 (EMBL:AP003358) (584 aa) fasta scores: E(): 8.5e-46%2C30.01 38d in 573 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003358;product=two-component system histidine kinase;protein_id=CAL11319.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1368838	1369155	.	-	.	ID=id2290;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 51.0%2C E-value 1.7e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	1370416	1370475	.	-	.	ID=id2291;Note=6 probable transmembrane helices predicted for YE1228 by TMHMM2.0 at aa 7-26%2C 41-63%2C 76-98%2C 108-130%2C137-159 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1370305	1370373	.	-	.	ID=id2291;Note=6 probable transmembrane helices predicted for YE1228 by TMHMM2.0 at aa 7-26%2C 41-63%2C 76-98%2C 108-130%2C137-159 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1370200	1370268	.	-	.	ID=id2291;Note=6 probable transmembrane helices predicted for YE1228 by TMHMM2.0 at aa 7-26%2C 41-63%2C 76-98%2C 108-130%2C137-159 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1370104	1370172	.	-	.	ID=id2291;Note=6 probable transmembrane helices predicted for YE1228 by TMHMM2.0 at aa 7-26%2C 41-63%2C 76-98%2C 108-130%2C137-159 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1370017	1370085	.	-	.	ID=id2291;Note=6 probable transmembrane helices predicted for YE1228 by TMHMM2.0 at aa 7-26%2C 41-63%2C 76-98%2C 108-130%2C137-159 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1369921	1369989	.	-	.	ID=id2291;Note=6 probable transmembrane helices predicted for YE1228 by TMHMM2.0 at aa 7-26%2C 41-63%2C 76-98%2C 108-130%2C137-159 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	1370664	1371911	.	-	.	ID=gene1230;Name=YE1229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1229
AM286415.1	EMBL	CDS	1370664	1371911	.	-	0	ID=cds1177;Parent=gene1230;Dbxref=EnsemblGenomes-Gn:YE1229,EnsemblGenomes-Tr:CAL11320,InterPro:IPR010856,InterPro:IPR027443,UniProtKB/TrEMBL:A1JLE5,NCBI_GP:CAL11320.1;Name=CAL11320.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11320.1;transl_table=11
AM286415.1	EMBL	gene	1372113	1372685	.	+	.	ID=gene1231;Name=YE1230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1230
AM286415.1	EMBL	CDS	1372113	1372685	.	+	0	ID=cds1178;Parent=gene1231;Dbxref=EnsemblGenomes-Gn:YE1230,EnsemblGenomes-Tr:CAL11321,GOA:A1JLE7,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JLE7,NCBI_GP:CAL11321.1;Name=CAL11321.1;Note=Similar to many including: Streptomyces coelicolor putative acetyltransferase Sco2876 or sce6.13 SWALL:Q9KZS5 (EMBL:AL353832) (208 aa) fasta scores: E(): 3.1e-11%2C32.04 38d in 181 aa and Bacillus halodurans ribosomal-protein-alanine N-acetyltransferase Bh0699 SWALL:Q9KF00 (EMBL:AP001509) (190 aa) fasta scores: E(): 5.6e-10%2C 29.89 38d in 184 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP001509;product=putative acetyltransferase;protein_id=CAL11321.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1372341	1372586	.	+	.	ID=id2292;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 52.3%2C E-value 7e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	1372817	1374052	.	+	.	ID=gene1232;Name=YE1231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1231
AM286415.1	EMBL	CDS	1372817	1374052	.	+	0	ID=cds1179;Parent=gene1232;Dbxref=EnsemblGenomes-Gn:YE1231,EnsemblGenomes-Tr:CAL11322,GOA:A1JLE9,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JLE9,NCBI_GP:CAL11322.1;Name=CAL11322.1;gbkey=CDS;product=putative aminotransferase;protein_id=CAL11322.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1373069	1373989	.	+	.	ID=id2293;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 147.6%2C E-value 1.4e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	1374008	1374031	.	+	.	ID=id2294;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1374220	1374744	.	+	.	ID=gene1233;Name=YE1232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1232
AM286415.1	EMBL	CDS	1374220	1374744	.	+	0	ID=cds1180;Parent=gene1233;Dbxref=EnsemblGenomes-Gn:YE1232,EnsemblGenomes-Tr:CAL11323,GOA:A1JLF0,InterPro:IPR016174,UniProtKB/TrEMBL:A1JLF0,NCBI_GP:CAL11323.1;Name=CAL11323.1;gbkey=CDS;product=putative B-type cytochrome;protein_id=CAL11323.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1374253	1374306	.	+	.	ID=id2295;Note=4 probable transmembrane helices predicted for YE1232 by TMHMM2.0 at aa 12-29%2C 44-63%2C 84-106 and 139-161;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1374349	1374408	.	+	.	ID=id2295;Note=4 probable transmembrane helices predicted for YE1232 by TMHMM2.0 at aa 12-29%2C 44-63%2C 84-106 and 139-161;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1374469	1374537	.	+	.	ID=id2295;Note=4 probable transmembrane helices predicted for YE1232 by TMHMM2.0 at aa 12-29%2C 44-63%2C 84-106 and 139-161;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1374634	1374702	.	+	.	ID=id2295;Note=4 probable transmembrane helices predicted for YE1232 by TMHMM2.0 at aa 12-29%2C 44-63%2C 84-106 and 139-161;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	1374529	1374552	.	+	.	ID=id2296;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1375159	1375590	.	-	.	ID=gene1234;Name=YE1233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1233
AM286415.1	EMBL	CDS	1375159	1375590	.	-	0	ID=cds1181;Parent=gene1234;Dbxref=EnsemblGenomes-Gn:YE1233,EnsemblGenomes-Tr:CAL11324,UniProtKB/TrEMBL:A1JLF8,NCBI_GP:CAL11324.1;Name=CAL11324.1;Note=Highly similar to Yersinia pestis hypothetical protein Ypo2973 SWALL:Q8ZCL0 (EMBL:AJ414154) (143 aa) fasta scores: E(): 1e-41%2C 82.39 38d in 142 aa. Also similar to Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YdcQ or b1438 or z2281 or ecs2042 SWALL:YDCQ_ECOLI (SWALL:P76107) (145 aa) fasta scores: E(): 5.1e-06%2C 26.86 38d in 134 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76107;product=conserved hypothetical protein;protein_id=CAL11324.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1375249	1375314	.	-	.	ID=id2297;Note=Predicted helix-turn-helix motif with score 1049.000%2C SD 2.76 at aa 64-85%2C sequence TRKADMARKLGLNAAQMDRLLD;gbkey=misc_feature
AM286415.1	EMBL	gene	1376102	1376773	.	+	.	ID=gene1235;Name=YE1234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1234
AM286415.1	EMBL	CDS	1376102	1376773	.	+	0	ID=cds1182;Parent=gene1235;Dbxref=EnsemblGenomes-Gn:YE1234,EnsemblGenomes-Tr:CAL11325,GOA:A1JLG1,InterPro:IPR005534,InterPro:IPR007195,UniProtKB/TrEMBL:A1JLG1,NCBI_GP:CAL11325.1;Name=CAL11325.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL11325.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1376105	1376764	.	+	.	ID=id2298;Note=Pfam match to entry PF03783 CsgG%2C Curli production assembly/transport component CsgG%2C score 227.2%2C E-value 1.6e-65;gbkey=misc_feature;inference=protein motif:PFAM:PF03783
AM286415.1	EMBL	sequence_feature	1376129	1376161	.	+	.	ID=id2299;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1376513	1376536	.	+	.	ID=id2300;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1376803	1377159	.	+	.	ID=gene1236;Name=YE1235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1235
AM286415.1	EMBL	CDS	1376803	1377159	.	+	0	ID=cds1183;Parent=gene1236;Dbxref=EnsemblGenomes-Gn:YE1235,EnsemblGenomes-Tr:CAL11326,InterPro:IPR014508,UniProtKB/TrEMBL:A1JLG3,NCBI_GP:CAL11326.1;Name=CAL11326.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL11326.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1376827	1376859	.	+	.	ID=id2301;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1377156	1377812	.	+	.	ID=gene1237;Name=YE1236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1236
AM286415.1	EMBL	CDS	1377156	1377812	.	+	0	ID=cds1184;Parent=gene1237;Dbxref=EnsemblGenomes-Gn:YE1236,EnsemblGenomes-Tr:CAL11327,InterPro:IPR008517,UniProtKB/TrEMBL:A1JLG5,NCBI_GP:CAL11327.1;Name=CAL11327.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL11327.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1377180	1377212	.	+	.	ID=id2302;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	pseudogene	1378015	1378218	.	+	.	ID=gene1238;Name=YE1236A;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1236A;pseudo=true
AM286415.1	EMBL	CDS	1378015	1378218	.	+	0	ID=cds1185;Parent=gene1238;Note=Similar to the very C-termini of several including: Erwinia chrysanthemi 6-phospho-beta-glucosidase ArbB SWALL:ARBB_ERWCH (SWALL:P26206) (465 aa) fasta scores: E(): 5.6e-20%2C 78.46 38d in 65 aa and to Klebsiella oxytoca phospho-cellobiase CasB SWALL:CASB_KLEOX (SWALL:Q48409) (464 aa) fasta scores: E(): 1.2e-18%2C 71.21 38d in 66 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q48409;product=6-phospho-beta-glucosidase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	1378318	1378848	.	+	.	ID=gene1239;Name=YE1237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1237
AM286415.1	EMBL	CDS	1378318	1378848	.	+	0	ID=cds1186;Parent=gene1239;Dbxref=EnsemblGenomes-Gn:YE1237,EnsemblGenomes-Tr:CAL11329,InterPro:IPR014591,InterPro:IPR021125,UniProtKB/TrEMBL:A1JLG7,NCBI_GP:CAL11329.1;Name=CAL11329.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11329.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1378378	1378446	.	+	.	ID=id2303;Note=4 probable transmembrane helices predicted for YE1237 by TMHMM2.0 at aa 21-43%2C 85-107%2C 114-133 and 137-159;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1378570	1378638	.	+	.	ID=id2303;Note=4 probable transmembrane helices predicted for YE1237 by TMHMM2.0 at aa 21-43%2C 85-107%2C 114-133 and 137-159;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1378657	1378716	.	+	.	ID=id2303;Note=4 probable transmembrane helices predicted for YE1237 by TMHMM2.0 at aa 21-43%2C 85-107%2C 114-133 and 137-159;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1378726	1378794	.	+	.	ID=id2303;Note=4 probable transmembrane helices predicted for YE1237 by TMHMM2.0 at aa 21-43%2C 85-107%2C 114-133 and 137-159;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1378874	1379512	.	-	.	ID=gene1240;Name=yfuD;gbkey=Gene;gene=yfuD;gene_biotype=protein_coding;locus_tag=YE1238
AM286415.1	EMBL	CDS	1378874	1379512	.	-	0	ID=cds1187;Parent=gene1240;Dbxref=EnsemblGenomes-Gn:YE1238,EnsemblGenomes-Tr:CAL11330,GOA:A1JLG8,InterPro:IPR001123,InterPro:IPR004778,UniProtKB/TrEMBL:A1JLG8,NCBI_GP:CAL11330.1;Name=CAL11330.1;Note=Similar to Yersinia enterocolitica hypothetical protein YfuD SWALL:Q9RIF0 (EMBL:Z47200) (212 aa) fasta scores: E(): 5.7e-78%2C 100 38d in 212 aa and to Escherichia coli%2C and Escherichia coli O157:H7 threonine efflux protein RhtC or b3823 or z5344 or ecs4753 SWALL:RHTC_ECOLI (SWALL:P27846) (206 aa) fasta scores: E(): 3.4e-15%2C 26.86 id in 201 aa;gbkey=CDS;gene=yfuD;inference=similar to sequence:UniProtKB:P27846;product=putative membrane transport protein;protein_id=CAL11330.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1379426	1379494	.	-	.	ID=id2304;Note=7 probable transmembrane helices predicted for YE1238 by TMHMM2.0 at aa 7-29%2C 39-61%2C 66-88%2C 98-117%2C130-147%2C 152-174 and 187-206;gbkey=misc_feature;gene=yfuD;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1379330	1379398	.	-	.	ID=id2304;Note=7 probable transmembrane helices predicted for YE1238 by TMHMM2.0 at aa 7-29%2C 39-61%2C 66-88%2C 98-117%2C130-147%2C 152-174 and 187-206;gbkey=misc_feature;gene=yfuD;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1379249	1379317	.	-	.	ID=id2304;Note=7 probable transmembrane helices predicted for YE1238 by TMHMM2.0 at aa 7-29%2C 39-61%2C 66-88%2C 98-117%2C130-147%2C 152-174 and 187-206;gbkey=misc_feature;gene=yfuD;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1379162	1379221	.	-	.	ID=id2304;Note=7 probable transmembrane helices predicted for YE1238 by TMHMM2.0 at aa 7-29%2C 39-61%2C 66-88%2C 98-117%2C130-147%2C 152-174 and 187-206;gbkey=misc_feature;gene=yfuD;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1379072	1379125	.	-	.	ID=id2304;Note=7 probable transmembrane helices predicted for YE1238 by TMHMM2.0 at aa 7-29%2C 39-61%2C 66-88%2C 98-117%2C130-147%2C 152-174 and 187-206;gbkey=misc_feature;gene=yfuD;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1378991	1379059	.	-	.	ID=id2304;Note=7 probable transmembrane helices predicted for YE1238 by TMHMM2.0 at aa 7-29%2C 39-61%2C 66-88%2C 98-117%2C130-147%2C 152-174 and 187-206;gbkey=misc_feature;gene=yfuD;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1378895	1378954	.	-	.	ID=id2304;Note=7 probable transmembrane helices predicted for YE1238 by TMHMM2.0 at aa 7-29%2C 39-61%2C 66-88%2C 98-117%2C130-147%2C 152-174 and 187-206;gbkey=misc_feature;gene=yfuD;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	1378979	1379305	.	-	.	ID=id2305;Note=Pfam match to entry PF01810 LysE%2C LysE type translocator%2C score 84.9%2C E-value 1.1e-22;gbkey=misc_feature;gene=yfuD;inference=protein motif:PFAM:PF01810
AM286415.1	EMBL	gene	1379635	1380684	.	-	.	ID=gene1241;Name=yfuC;gbkey=Gene;gene=yfuC;gene_biotype=protein_coding;gene_synonym=sfuC;locus_tag=YE1239
AM286415.1	EMBL	CDS	1379635	1380684	.	-	0	ID=cds1188;Parent=gene1241;Dbxref=EnsemblGenomes-Gn:YE1239,EnsemblGenomes-Tr:CAL11331,GOA:A1JLH0,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR015853,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JLH0,NCBI_GP:CAL11331.1;Name=CAL11331.1;gbkey=CDS;gene=yfuC;product=iron(III)-transport ATP-binding protein;protein_id=CAL11331.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1380049	1380600	.	-	.	ID=id2306;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 222.1%2C E-value 5.2e-64;gbkey=misc_feature;gene=yfuC;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1380235	1380279	.	-	.	ID=id2307;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=yfuC;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1380556	1380579	.	-	.	ID=id2308;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=yfuC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1380681	1382267	.	-	.	ID=gene1242;Name=yfuB;gbkey=Gene;gene=yfuB;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=YE1240
AM286415.1	EMBL	CDS	1380681	1382267	.	-	0	ID=cds1189;Parent=gene1242;Dbxref=EnsemblGenomes-Gn:YE1240,EnsemblGenomes-Tr:CAL11332,GOA:A1JLH2,InterPro:IPR000515,UniProtKB/TrEMBL:A1JLH2,NCBI_GP:CAL11332.1;Name=CAL11332.1;gbkey=CDS;gene=yfuB;product=iron(III)-transport system permease;protein_id=CAL11332.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1382115	1382183	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1381989	1382057	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1381884	1381952	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1381788	1381856	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1381626	1381694	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1381500	1381568	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1381353	1381421	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1381206	1381274	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1381104	1381172	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1381023	1381091	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1380837	1380905	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1380711	1380779	.	-	.	ID=id2309;Note=12 probable transmembrane helices predicted for YE1240 by TMHMM2.0 at aa 29-51%2C 71-93%2C 106-128%2C 138-160%2C192-214%2C 234-256%2C 283-305%2C 332-354%2C 366-388%2C 393-415%2C455-477 and 497-519;gbkey=misc_feature;gene=yfuB;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	1380789	1381010	.	-	.	ID=id2310;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 57.0%2C E-value 2.7e-14;gbkey=misc_feature;gene=yfuB;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	1381404	1381436	.	-	.	ID=id2311;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yfuB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1381569	1381793	.	-	.	ID=id2312;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 24.7%2C E-value 0.00014;gbkey=misc_feature;gene=yfuB;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	1382354	1383370	.	-	.	ID=gene1243;Name=yfuA;gbkey=Gene;gene=yfuA;gene_biotype=protein_coding;gene_synonym=sfuA;locus_tag=YE1241
AM286415.1	EMBL	CDS	1382354	1383370	.	-	0	ID=cds1190;Parent=gene1243;Dbxref=EnsemblGenomes-Gn:YE1241,EnsemblGenomes-Tr:CAL11333,GOA:A1JLH5,InterPro:IPR006061,InterPro:IPR026045,PDB:1XVX,UniProtKB/TrEMBL:A1JLH5,NCBI_GP:CAL11333.1;Name=CAL11333.1;gbkey=CDS;gene=yfuA;product=iron(III)-binding periplasmic protein;protein_id=CAL11333.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1382357	1383265	.	-	.	ID=id2313;Note=Pfam match to entry PF01547 SBP_bac_1%2C Bacterial extracellular solute-binding protein%2C score 78.8%2C E-value 7.1e-21;gbkey=misc_feature;gene=yfuA;inference=protein motif:PFAM:PF01547
AM286415.1	EMBL	sequence_feature	1382942	1382995	.	-	.	ID=id2314;Note=PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature.;gbkey=misc_feature;gene=yfuA;inference=protein motif:Prosite:PS01037
AM286415.1	EMBL	gene	1383664	1384758	.	+	.	ID=gene1244;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=YE1242
AM286415.1	EMBL	CDS	1383664	1384758	.	+	0	ID=cds1191;Parent=gene1244;Dbxref=EnsemblGenomes-Gn:YE1242,EnsemblGenomes-Tr:CAL11334,InterPro:IPR011757,InterPro:IPR023346,UniProtKB/TrEMBL:A1JLH8,NCBI_GP:CAL11334.1;Name=CAL11334.1;gbkey=CDS;gene=mltB;product=putative membrane-bound lytic murein transglycosylase B;protein_id=CAL11334.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1383700	1383732	.	+	.	ID=id2315;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=mltB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1384987	1386327	.	-	.	ID=gene1245;Name=YE1243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1243
AM286415.1	EMBL	CDS	1384987	1386327	.	-	0	ID=cds1192;Parent=gene1245;Dbxref=EnsemblGenomes-Gn:YE1243,EnsemblGenomes-Tr:CAL11335,GOA:A1JLH9,InterPro:IPR002293,InterPro:IPR004841,UniProtKB/TrEMBL:A1JLH9,NCBI_GP:CAL11335.1;Name=CAL11335.1;Note=Similar to Pseudomonas aeruginosa probable amino acid permease Pa3597 SWALL:Q9HY29 (EMBL:AE004780) (440 aa) fasta scores: E(): 1.8e-63%2C 40.46 38d in 435 aa and to Escherichia coli hypothetical transport protein YcjJ or b1296 SWALL:YCJJ_ECOLI (SWALL:P76037) (461 aa) fasta scores: E(): 3e-59%2C 38.32 38d in 441 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76037;product=putative eamino acid permease;protein_id=CAL11335.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1385047	1386309	.	-	.	ID=id2316;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -156.9%2C E-value 2.4e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	1386127	1386195	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1385998	1386066	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1385902	1385970	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1385815	1385883	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1385689	1385757	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1385584	1385652	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1385419	1385487	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1385299	1385358	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1385224	1385289	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1385122	1385190	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1385050	1385109	.	-	.	ID=id2317;Note=12 probable transmembrane helices predicted for YE1243 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 120-142%2C149-171%2C 191-213%2C 226-248%2C 281-303%2C 324-343%2C 347-368%2C380-402 and 407-426;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	1386752	1388482	.	-	.	ID=gene1246;Name=YE1244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1244
AM286415.1	EMBL	CDS	1386752	1388482	.	-	0	ID=cds1193;Parent=gene1246;Dbxref=EnsemblGenomes-Gn:YE1244,EnsemblGenomes-Tr:CAL11336,GOA:A1JLI3,InterPro:IPR011059,InterPro:IPR013108,UniProtKB/TrEMBL:A1JLI3,NCBI_GP:CAL11336.1;Name=CAL11336.1;Note=Similar to many including: Rhizobium meliloti hypothetical protein Ra0050 or Sma0101 SWALL:Q930Z4 (EMBL:AE007199) (541 aa) fasta scores: E(): 1e-15%2C 30.29 id in 571 aa and to Erwinia carotovora exoenzymes regulatory protein AepA precursor SWALL:AEPA_ERWCA (SWALL:Q06555) (465 aa) fasta scores: E(): 1.3e-12%2C 23.89 id in 452 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q06555;product=conserved hypothetical protein;protein_id=CAL11336.1;transl_table=11
AM286415.1	EMBL	gene	1388642	1389232	.	-	.	ID=gene1247;Name=YE1245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1245
AM286415.1	EMBL	CDS	1388642	1389232	.	-	0	ID=cds1194;Parent=gene1247;Dbxref=EnsemblGenomes-Gn:YE1245,EnsemblGenomes-Tr:CAL11337,GOA:A1JLI4,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR015893,UniProtKB/TrEMBL:A1JLI4,NCBI_GP:CAL11337.1;Name=CAL11337.1;Note=Similar to many proposed regulatory proteins including: Salmonella typhi putative regulatory protein Sty1490 SWALL:Q8Z730 (EMBL:AL627270) (192 aa) fasta scores: E(): 1.2e-26%2C 44.61 38d in 195 aa%2C and to Streptomyces coelicolor putative transcriptional regulator Sco6775 or Sc6a5.24C SWALL:Q9X7X0 (EMBL:AL049485) (206 aa) fasta scores: E(): 1.4e-05%2C 30.58 38d in 170 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627270;product=putative TetR-family regulatory protein;protein_id=CAL11337.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1388807	1388839	.	-	.	ID=id2318;Note=PS00136 Serine proteases%2C subtilase family%2Caspartic acid active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00136
AM286415.1	EMBL	sequence_feature	1389056	1389196	.	-	.	ID=id2319;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 52.0%2C E-value 8.3e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00440
AM286415.1	EMBL	sequence_feature	1389083	1389148	.	-	.	ID=id2320;Note=Predicted helix-turn-helix motif with score 1020.000%2C SD 2.66 at aa 29-50%2C sequence TTVRRVASEAGVAVGQVHHHFT;gbkey=misc_feature
AM286415.1	EMBL	gene	1389366	1390859	.	+	.	ID=gene1248;Name=YE1246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1246
AM286415.1	EMBL	CDS	1389366	1390859	.	+	0	ID=cds1195;Parent=gene1248;Dbxref=EnsemblGenomes-Gn:YE1246,EnsemblGenomes-Tr:CAL11338,GOA:A1JLI6,InterPro:IPR001411,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JLI6,NCBI_GP:CAL11338.1;Name=CAL11338.1;Note=Similar to Salmonella typhimurium methyl viologen resistance protein SmvA or Stm1574 SWALL:SMVA_SALTY (SWALL:P37594) (495 aa) fasta scores: E(): 3.6e-100%2C57.98 38d in 495 aa and to Pseudomonas aeruginosa probable MFS transporter Pa1282 SWALL:Q9I462 (EMBL:AE004557) (501 aa) fasta scores: E(): 4.2e-62%2C 42.76 38d in 484 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37594;product=MFS-family membrane transport protein;protein_id=CAL11338.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1389381	1389449	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	1389492	1389560	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	1389579	1389647	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	1389657	1389725	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	1389762	1389830	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	1389843	1389911	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	1389948	1390001	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	1390029	1390085	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	1390143	1390211	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	1390254	1390322	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	1390341	1390397	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	1390425	1390493	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	1390530	1390598	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	1390752	1390820	.	+	.	ID=id2321;Note=14 probable transmembrane helices predicted for YE1246 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 126-148%2C161-183%2C 188-210%2C 223-240%2C 250-268%2C 288-310%2C 325-347%2C354-372%2C 382-404%2C 417-439 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	gene	1391203	1392348	.	+	.	ID=gene1249;Name=YE1247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1247
AM286415.1	EMBL	CDS	1391203	1392348	.	+	0	ID=cds1196;Parent=gene1249;Dbxref=EnsemblGenomes-Gn:YE1247,EnsemblGenomes-Tr:CAL11339,InterPro:IPR003453,UniProtKB/TrEMBL:A1JLI9,NCBI_GP:CAL11339.1;Name=CAL11339.1;Note=Similar to many membrane transport proteins including: Pseudomonas aeruginosa probable permease of ABC transporter Pa3211 SWALL:Q9HZ29 (EMBL:AE004744) (381 aa) fasta scores: E(): 1.5e-94%2C 69.55 38d in 381 aa and to Brucella melitensis toluene tolerance protein Ttg2b or Bmei0965 SWALL:Q8YH39 (EMBL:AE009537) (390 aa) fasta scores: E(): 5.2e-37%2C 34.84 38d in 376 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE009537;product=ABC transporter%2C membrane permease;protein_id=CAL11339.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1391605	1392333	.	+	.	ID=id2322;Note=Pfam match to entry PF02405 DUF140%2C Domain of unknown function DUF140%2C score 246.9%2C E-value 1.8e-71;gbkey=misc_feature;inference=protein motif:PFAM:PF02405
AM286415.1	EMBL	sequence_feature	1391713	1391781	.	+	.	ID=id2323;Note=6 probable transmembrane helices predicted for YE1247 by TMHMM2.0 at aa 171-193%2C 197-216%2C 221-243%2C276-298%2C 318-340 and 355-377;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1391791	1391850	.	+	.	ID=id2323;Note=6 probable transmembrane helices predicted for YE1247 by TMHMM2.0 at aa 171-193%2C 197-216%2C 221-243%2C276-298%2C 318-340 and 355-377;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1391863	1391931	.	+	.	ID=id2323;Note=6 probable transmembrane helices predicted for YE1247 by TMHMM2.0 at aa 171-193%2C 197-216%2C 221-243%2C276-298%2C 318-340 and 355-377;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1392028	1392096	.	+	.	ID=id2323;Note=6 probable transmembrane helices predicted for YE1247 by TMHMM2.0 at aa 171-193%2C 197-216%2C 221-243%2C276-298%2C 318-340 and 355-377;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1392154	1392222	.	+	.	ID=id2323;Note=6 probable transmembrane helices predicted for YE1247 by TMHMM2.0 at aa 171-193%2C 197-216%2C 221-243%2C276-298%2C 318-340 and 355-377;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1392265	1392333	.	+	.	ID=id2323;Note=6 probable transmembrane helices predicted for YE1247 by TMHMM2.0 at aa 171-193%2C 197-216%2C 221-243%2C276-298%2C 318-340 and 355-377;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1392181	1392213	.	+	.	ID=id2324;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1392345	1393148	.	+	.	ID=gene1250;Name=YE1248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1248
AM286415.1	EMBL	CDS	1392345	1393148	.	+	0	ID=cds1197;Parent=gene1250;Dbxref=EnsemblGenomes-Gn:YE1248,EnsemblGenomes-Tr:CAL11340,GOA:A1JLJ1,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR027417,UniProtKB/TrEMBL:A1JLJ1,NCBI_GP:CAL11340.1;Name=CAL11340.1;Note=Similar to many membrane transport proteins including:Pseudomonas aeruginosa probable ATP-binding component of ABC transporter Pa3212 SWALL:Q9HZ28 (EMBL:AE004744) (264 aa) fasta scores: E(): 3.5e-67%2C80.69 38d in 259 aa and Rhizobium meliloti putative ABC transporter ATP-binding protein R01832 or Smc00175 SWALL:Q92PD6 (EMBL:AL591788) (269 aa) fasta scores: E(): 2.5e-42%2C 53.62 38d in 248 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591788;product=ABC transporter%2C ATP-binding component;protein_id=CAL11340.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1392447	1393013	.	+	.	ID=id2325;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 209.7%2C E-value 2.9e-60;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1392468	1392491	.	+	.	ID=id2326;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1393149	1394090	.	+	.	ID=gene1251;Name=YE1249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1249
AM286415.1	EMBL	CDS	1393149	1394090	.	+	0	ID=cds1198;Parent=gene1251;Dbxref=EnsemblGenomes-Gn:YE1249,EnsemblGenomes-Tr:CAL11341,InterPro:IPR003399,UniProtKB/TrEMBL:A1JLJ5,NCBI_GP:CAL11341.1;Name=CAL11341.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa3213 SWALL:Q9HZ27 (EMBL:AE004744) (312 aa) fasta scores: E(): 2.3e-64%2C 60.89 38d in 312 aa and to Caulobacter crescentus ABC transporter%2C periplasmic substrate-binding protein%2C putative Cc2320 SWALL:Q9A5X7 (EMBL:AE005902) (312 aa) fasta scores: E(): 7.4e-24%2C31.73 38d in 312 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005902;product=putative exported protein;protein_id=CAL11341.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1393167	1393235	.	+	.	ID=id2327;Note=1 probable transmembrane helix predicted for YE1249 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1393176	1393592	.	+	.	ID=id2328;Note=Pfam match to entry PF02470 mce%2C mce related protein%2C score 9.9%2C E-value 6.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF02470
AM286415.1	EMBL	gene	1394087	1394722	.	+	.	ID=gene1252;Name=YE1250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1250
AM286415.1	EMBL	CDS	1394087	1394722	.	+	0	ID=cds1199;Parent=gene1252;Dbxref=EnsemblGenomes-Gn:YE1250,EnsemblGenomes-Tr:CAL11342,InterPro:IPR005586,UniProtKB/TrEMBL:A1JLJ6,NCBI_GP:CAL11342.1;Name=CAL11342.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa3214 SWALL:Q9HZ26 (EMBL:AE004744) (214 aa) fasta scores: E(): 1.4e-35%2C 53 38d in 200 aa%2C Xylella fastidiosa hypothetical protein Xf1300 SWALL:Q9PDS9 (EMBL:AE003963) (213 aa) fasta scores: E(): 4.8e-14%2C 32.29 38d in 192 aa and Ralstonia solanacearum probable lipoprotein Rsc0316 or Rs03283 SWALL:Q8Y2L9 (EMBL:AL646058) (211 aa) fasta scores: E(): 9.6e-05%2C 28.07 38d in 203 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646058;product=putative exported protein;protein_id=CAL11342.1;transl_table=11
AM286415.1	EMBL	gene	1394764	1395558	.	-	.	ID=gene1253;Name=YE1251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1251
AM286415.1	EMBL	CDS	1394764	1395558	.	-	0	ID=cds1200;Parent=gene1253;Dbxref=EnsemblGenomes-Gn:YE1251,EnsemblGenomes-Tr:CAL11343,GOA:A1JLJ9,InterPro:IPR000551,InterPro:IPR009061,InterPro:IPR011256,UniProtKB/TrEMBL:A1JLJ9,NCBI_GP:CAL11343.1;Name=CAL11343.1;gbkey=CDS;product=putative regulatory protein;protein_id=CAL11343.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1395439	1395540	.	-	.	ID=id2329;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 29.0%2C E-value 7e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00376
AM286415.1	EMBL	gene	1395649	1396575	.	-	.	ID=gene1254;Name=YE1252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1252
AM286415.1	EMBL	CDS	1395649	1396575	.	-	0	ID=cds1201;Parent=gene1254;Dbxref=EnsemblGenomes-Gn:YE1252,EnsemblGenomes-Tr:CAL11344,GOA:A1JLJ7,InterPro:IPR013094,InterPro:IPR029058,UniProtKB/TrEMBL:A1JLJ7,NCBI_GP:CAL11344.1;Name=CAL11344.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11344.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1396357	1396389	.	-	.	ID=id2330;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1396957	1397511	.	+	.	ID=gene1255;Name=YE1253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1253
AM286415.1	EMBL	CDS	1396957	1397511	.	+	0	ID=cds1202;Parent=gene1255;Dbxref=EnsemblGenomes-Gn:YE1253,EnsemblGenomes-Tr:CAL11345,GOA:A1JLJ8,InterPro:IPR016174,UniProtKB/TrEMBL:A1JLJ8,NCBI_GP:CAL11345.1;Name=CAL11345.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11345.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1396993	1397061	.	+	.	ID=id2331;Note=4 probable transmembrane helices predicted for YE1253 by TMHMM2.0 at aa 13-35%2C 50-69%2C 90-112 and 147-169;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1397104	1397163	.	+	.	ID=id2331;Note=4 probable transmembrane helices predicted for YE1253 by TMHMM2.0 at aa 13-35%2C 50-69%2C 90-112 and 147-169;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1397224	1397292	.	+	.	ID=id2331;Note=4 probable transmembrane helices predicted for YE1253 by TMHMM2.0 at aa 13-35%2C 50-69%2C 90-112 and 147-169;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1397395	1397463	.	+	.	ID=id2331;Note=4 probable transmembrane helices predicted for YE1253 by TMHMM2.0 at aa 13-35%2C 50-69%2C 90-112 and 147-169;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1397537	1398115	.	+	.	ID=gene1256;Name=YE1254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1254
AM286415.1	EMBL	CDS	1397537	1398115	.	+	0	ID=cds1203;Parent=gene1256;Dbxref=EnsemblGenomes-Gn:YE1254,EnsemblGenomes-Tr:CAL11346,GOA:A1JLK0,InterPro:IPR007372,InterPro:IPR023480,NCBI_GP:CAL11346.1;Name=CAL11346.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11346.1;transl_table=11
AM286415.1	EMBL	gene	1398513	1399544	.	-	.	ID=gene1257;Name=ascG;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=YE1255
AM286415.1	EMBL	CDS	1398513	1399544	.	-	0	ID=cds1204;Parent=gene1257;Dbxref=EnsemblGenomes-Gn:YE1255,EnsemblGenomes-Tr:CAL11347,GOA:A1JLK1,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JLK1,NCBI_GP:CAL11347.1;Name=CAL11347.1;Note=Similar to Escherichia coli cryptic asc operon PTS system repressor AscG or B2714 SWALL:ASCG_ECOLI (SWALL:P24242) (336 aa) fasta scores: E(): 3.2e-78%2C 64.95 id in 331 aa%2C and to Escherichia coli O157:H7 AscBF operon repressor AscG or z4022 or ecs3570 SWALL:Q8X843 (EMBL:AE005499) (337 aa) fasta scores: E(): 2.8e-78%2C64.34 38d in 331 aa;gbkey=CDS;gene=ascG;inference=similar to sequence:UniProtKB:P24242;product=putative regulatory protein;protein_id=CAL11347.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1398558	1399370	.	-	.	ID=id2332;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 56.3%2C E-value 4.3e-14;gbkey=misc_feature;gene=ascG;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	sequence_feature	1399464	1399544	.	-	.	ID=id2333;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 47.8%2C E-value 1.6e-11;gbkey=misc_feature;gene=ascG;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	1399476	1399541	.	-	.	ID=id2334;Note=Predicted helix-turn-helix motif with score 2147.000%2C SD 6.50 at aa 2-23%2C sequence STMQEVAKKAGVSKATVSRVLS;gbkey=misc_feature;gene=ascG
AM286415.1	EMBL	sequence_feature	1399479	1399535	.	-	.	ID=id2335;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=ascG;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	gene	1399879	1401345	.	+	.	ID=gene1258;Name=ascF;gbkey=Gene;gene=ascF;gene_biotype=protein_coding;locus_tag=YE1256
AM286415.1	EMBL	CDS	1399879	1401345	.	+	0	ID=cds1205;Parent=gene1258;Dbxref=EnsemblGenomes-Gn:YE1256,EnsemblGenomes-Tr:CAL11348,GOA:A1JLK2,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR013013,InterPro:IPR018113,UniProtKB/TrEMBL:A1JLK2,NCBI_GP:CAL11348.1;Name=CAL11348.1;Note=Similar to Escherichia coli PTS system%2C arbutin-%2Ccellobiose-%2C and salicin-specific II ABC component Ascf or b2715 SWALL:PTDA_ECOLI (SWALL:P24241) (485 aa) fasta scores: E(): 4.3e-138%2C 81.11 38d in 466 aa%2C and to Escherichia coli O157:H7 PTS system enzyme II ABC Ascf or z4023 or ecs3571 SWALL:Q8X842 (EMBL:AE005500) (485 aa) fasta scores: E(): 6.2e-140%2C 79.67 38d in 487 aa;gbkey=CDS;gene=ascF;inference=similar to sequence:UniProtKB:P24241;product=PTS transport protein;protein_id=CAL11348.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1399912	1400016	.	+	.	ID=id2336;Note=Pfam match to entry PF00367 PTS_EIIB%2Cphosphotransferase system%2C EIIB%2C score 60.8%2C E-value 1.9e-15;gbkey=misc_feature;gene=ascF;inference=protein motif:PFAM:PF00367
AM286415.1	EMBL	sequence_feature	1399948	1400001	.	+	.	ID=id2337;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;gene=ascF;inference=protein motif:Prosite:PS01035
AM286415.1	EMBL	sequence_feature	1400200	1400268	.	+	.	ID=id2338;Note=8 probable transmembrane helices predicted for YE1256 by TMHMM2.0 at aa 108-130%2C 150-172%2C 179-201%2C216-238%2C 258-280%2C 295-317%2C 393-415 and 438-460;gbkey=misc_feature;gene=ascF;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	1400326	1400394	.	+	.	ID=id2338;Note=8 probable transmembrane helices predicted for YE1256 by TMHMM2.0 at aa 108-130%2C 150-172%2C 179-201%2C216-238%2C 258-280%2C 295-317%2C 393-415 and 438-460;gbkey=misc_feature;gene=ascF;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	1400413	1400481	.	+	.	ID=id2338;Note=8 probable transmembrane helices predicted for YE1256 by TMHMM2.0 at aa 108-130%2C 150-172%2C 179-201%2C216-238%2C 258-280%2C 295-317%2C 393-415 and 438-460;gbkey=misc_feature;gene=ascF;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	1400524	1400592	.	+	.	ID=id2338;Note=8 probable transmembrane helices predicted for YE1256 by TMHMM2.0 at aa 108-130%2C 150-172%2C 179-201%2C216-238%2C 258-280%2C 295-317%2C 393-415 and 438-460;gbkey=misc_feature;gene=ascF;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	1400650	1400718	.	+	.	ID=id2338;Note=8 probable transmembrane helices predicted for YE1256 by TMHMM2.0 at aa 108-130%2C 150-172%2C 179-201%2C216-238%2C 258-280%2C 295-317%2C 393-415 and 438-460;gbkey=misc_feature;gene=ascF;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	1400761	1400829	.	+	.	ID=id2338;Note=8 probable transmembrane helices predicted for YE1256 by TMHMM2.0 at aa 108-130%2C 150-172%2C 179-201%2C216-238%2C 258-280%2C 295-317%2C 393-415 and 438-460;gbkey=misc_feature;gene=ascF;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	1401055	1401123	.	+	.	ID=id2338;Note=8 probable transmembrane helices predicted for YE1256 by TMHMM2.0 at aa 108-130%2C 150-172%2C 179-201%2C216-238%2C 258-280%2C 295-317%2C 393-415 and 438-460;gbkey=misc_feature;gene=ascF;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	1401190	1401258	.	+	.	ID=id2338;Note=8 probable transmembrane helices predicted for YE1256 by TMHMM2.0 at aa 108-130%2C 150-172%2C 179-201%2C216-238%2C 258-280%2C 295-317%2C 393-415 and 438-460;gbkey=misc_feature;gene=ascF;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	1400218	1401078	.	+	.	ID=id2339;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 64.8%2C E-value 1.2e-16;gbkey=misc_feature;gene=ascF;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	gene	1401361	1402791	.	+	.	ID=gene1259;Name=ascB;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=YE1257
AM286415.1	EMBL	CDS	1401361	1402791	.	+	0	ID=cds1206;Parent=gene1259;Dbxref=EnsemblGenomes-Gn:YE1257,EnsemblGenomes-Tr:CAL11349,GOA:A1JLK3,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018120,UniProtKB/TrEMBL:A1JLK3,NCBI_GP:CAL11349.1;Name=CAL11349.1;Note=Similar to Escherichia coli 6-phospho-beta-glucosidase AscB or b2716 SWALL:ASCB_ECOLI (SWALL:P24240) (474 aa) fasta scores: E(): 4e-175%2C 83.08 id in 473 aa%2C and to Escherichia coli O157:H7 6-phospho-beta-glucosidase%2C cryptic ascB or z4024 or ecs3572 SWALL:Q8X841 (EMBL:AE005500) (474 aa) fasta scores: E(): 2.6e-175%2C 83.51 38d in 473 aa;gbkey=CDS;gene=ascB;inference=similar to sequence:UniProtKB:P24240;product=putative 6-phospho-beta-glucosidase;protein_id=CAL11349.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1401364	1402788	.	+	.	ID=id2340;Note=Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1%2C score 499.4%2C E-value 1.8e-147;gbkey=misc_feature;gene=ascB;inference=protein motif:PFAM:PF00232
AM286415.1	EMBL	sequence_feature	1401388	1401432	.	+	.	ID=id2341;Note=PS00653 Glycosyl hydrolases family 1 N-terminal signature.;gbkey=misc_feature;gene=ascB;inference=protein motif:Prosite:PS00653
AM286415.1	EMBL	sequence_feature	1402468	1402494	.	+	.	ID=id2342;Note=PS00572 Glycosyl hydrolases family 1 active site.;gbkey=misc_feature;gene=ascB;inference=protein motif:Prosite:PS00572
AM286415.1	EMBL	gene	1402884	1403195	.	-	.	ID=gene1260;Name=YE1258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1258
AM286415.1	EMBL	CDS	1402884	1403195	.	-	0	ID=cds1207;Parent=gene1260;Dbxref=EnsemblGenomes-Gn:YE1258,EnsemblGenomes-Tr:CAL11350,InterPro:IPR024476,UniProtKB/TrEMBL:A1JJY5,NCBI_GP:CAL11350.1;Name=CAL11350.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11350.1;transl_table=11
AM286415.1	EMBL	gene	1403195	1403854	.	-	.	ID=gene1261;Name=YE1259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1259
AM286415.1	EMBL	CDS	1403195	1403854	.	-	0	ID=cds1208;Parent=gene1261;Dbxref=EnsemblGenomes-Gn:YE1259,EnsemblGenomes-Tr:CAL11351,InterPro:IPR005149,InterPro:IPR011991,UniProtKB/TrEMBL:A1JJY6,NCBI_GP:CAL11351.1;Name=CAL11351.1;Note=Similar to Yersinia pestis hypothetical protein Ypo0864 SWALL:Q8ZHM7 (EMBL:AJ414145) (226 aa) fasta scores: E(): 1.1e-59%2C 78.57 38d in 210 aa and Caulobacter crescentus hypothetical protein Cc3691 SWALL:Q9A275 (EMBL:AE006026) (152 aa) fasta scores: E(): 1.1e-18%2C47.02 38d in 151 aa%2C and to Escherichia coli O157:H7 orf%2Chypothetical protein yqji or z4424 or ecs3953 SWALL:Q8XAN2 (EMBL:AE005536) (207 aa) fasta scores: E(): 7.4e-17%2C36.45 38d in 203 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=conserved hypothetical protein;protein_id=CAL11351.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1403438	1403659	.	-	.	ID=id2343;Note=Pfam match to entry PF03551 PadR%2C Transcriptional regulator PadR-like family%2C score 87.9%2C E-value 1.3e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF03551
AM286415.1	EMBL	gene	1404268	1404600	.	-	.	ID=gene1262;Name=YE1260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1260
AM286415.1	EMBL	CDS	1404268	1404600	.	-	0	ID=cds1209;Parent=gene1262;Dbxref=EnsemblGenomes-Gn:YE1260,EnsemblGenomes-Tr:CAL11352,InterPro:IPR004624,InterPro:IPR013987,InterPro:IPR013988,UniProtKB/TrEMBL:A1JJY8,NCBI_GP:CAL11352.1;Name=CAL11352.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11352.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1404313	1404477	.	-	.	ID=id2344;Note=Pfam match to entry PF03831 PhnA%2C PhnA protein %2Cscore 127.1%2C E-value 2.1e-35;gbkey=misc_feature;inference=protein motif:PFAM:PF03831
AM286415.1	EMBL	pseudogene	1404851	1405099	.	-	.	ID=gene1263;Name=YE1261;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1261;pseudo=true
AM286415.1	EMBL	CDS	1404851	1405099	.	-	0	ID=cds1210;Parent=gene1263;Note=Similar to Escherichia coli O157:H7 integrase protein for prophage CP-933i Z0324 or ecs0289 SWALL:Q8X7K7 (EMBL:AE005203) (410 aa) fasta scores: E(): 1e-18%2C 64.63 id in 82 aa and Yersinia pestis putative phage integrase Ypo4033 SWALL:Q8Z9Z6 (EMBL:AJ414160) (397 aa) fasta scores: E(): 7.8e-15%2C 69.23 38d in 65 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414160;product=putative phage integrase (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	1405212	1405286	.	-	.	ID=gene1264;Name=tRNA-Arg (CCT);gbkey=Gene;gene=tRNA-Arg (CCT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1405212	1405286	.	-	.	ID=rna65;Parent=gene1264;gbkey=tRNA;gene=tRNA-Arg (CCT);product=tRNA-Arg
AM286415.1	EMBL	exon	1405212	1405286	.	-	.	ID=id2345;Parent=rna65;gbkey=tRNA;gene=tRNA-Arg (CCT);product=tRNA-Arg
AM286415.1	EMBL	gene	1405460	1406371	.	-	.	ID=gene1265;Name=YE1262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1262
AM286415.1	EMBL	CDS	1405460	1406371	.	-	0	ID=cds1211;Parent=gene1265;Dbxref=EnsemblGenomes-Gn:YE1262,EnsemblGenomes-Tr:CAL11354,GOA:A1JJZ0,InterPro:IPR000292,InterPro:IPR023271,UniProtKB/TrEMBL:A1JJZ0,NCBI_GP:CAL11354.1;Name=CAL11354.1;Note=Similar to many including: Salmonella typhimurium putative transport YfdC or Stm2393 SWALL:Q8ZNA4 (EMBL:AE008807) (313 aa) fasta scores: E(): 3.4e-76%2C68.27 38d in 290 aa and Escherichia coli hypothetical protein YfdC or b2347 SWALL:YFDC_ECOLI (SWALL:P37327) (310 aa) fasta scores: E(): 7.2e-75%2C 67.46 38d in 292 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37327;product=putative inner membrane protein;protein_id=CAL11354.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1406144	1406203	.	-	.	ID=id2346;Note=6 probable transmembrane helices predicted for YE1262 by TMHMM2.0 at aa 57-76%2C 91-113%2C 134-156%2C 192-214%2C221-243 and 253-275;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1406033	1406101	.	-	.	ID=id2346;Note=6 probable transmembrane helices predicted for YE1262 by TMHMM2.0 at aa 57-76%2C 91-113%2C 134-156%2C 192-214%2C221-243 and 253-275;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1405904	1405972	.	-	.	ID=id2346;Note=6 probable transmembrane helices predicted for YE1262 by TMHMM2.0 at aa 57-76%2C 91-113%2C 134-156%2C 192-214%2C221-243 and 253-275;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1405730	1405798	.	-	.	ID=id2346;Note=6 probable transmembrane helices predicted for YE1262 by TMHMM2.0 at aa 57-76%2C 91-113%2C 134-156%2C 192-214%2C221-243 and 253-275;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1405643	1405711	.	-	.	ID=id2346;Note=6 probable transmembrane helices predicted for YE1262 by TMHMM2.0 at aa 57-76%2C 91-113%2C 134-156%2C 192-214%2C221-243 and 253-275;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1405547	1405615	.	-	.	ID=id2346;Note=6 probable transmembrane helices predicted for YE1262 by TMHMM2.0 at aa 57-76%2C 91-113%2C 134-156%2C 192-214%2C221-243 and 253-275;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	1406645	1407271	.	+	.	ID=gene1266;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=YE1263
AM286415.1	EMBL	CDS	1406645	1407271	.	+	0	ID=cds1212;Parent=gene1266;Dbxref=EnsemblGenomes-Gn:YE1263,EnsemblGenomes-Tr:CAL11355,GOA:A1JJZ1,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005895,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJZ1,NCBI_GP:CAL11355.1;Name=CAL11355.1;gbkey=CDS;gene=ccmA;product=putative heme exporter protein A;protein_id=CAL11355.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1406723	1407253	.	+	.	ID=id2347;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 129.8%2C E-value 3.2e-36;gbkey=misc_feature;gene=ccmA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1406744	1406767	.	+	.	ID=id2348;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ccmA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1407032	1407076	.	+	.	ID=id2349;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=ccmA;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	1407271	1407930	.	+	.	ID=gene1267;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=YE1264
AM286415.1	EMBL	CDS	1407271	1407930	.	+	0	ID=cds1213;Parent=gene1267;Dbxref=EnsemblGenomes-Gn:YE1264,EnsemblGenomes-Tr:CAL11356,GOA:A1JJZ3,InterPro:IPR003544,InterPro:IPR026031,UniProtKB/TrEMBL:A1JJZ3,NCBI_GP:CAL11356.1;Name=CAL11356.1;gbkey=CDS;gene=ccmB;product=heme exporter protein B;protein_id=CAL11356.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1407274	1407918	.	+	.	ID=id2350;Note=Pfam match to entry PF03379 CcmB%2C CcmB protein %2Cscore 438.2%2C E-value 4.8e-129;gbkey=misc_feature;gene=ccmB;inference=protein motif:PFAM:PF03379
AM286415.1	EMBL	sequence_feature	1407287	1407298	.	+	.	ID=id2351;Note=PS00294 Prenyl group binding site (CAAX box).;gbkey=misc_feature;gene=ccmB;inference=protein motif:Prosite:PS00294
AM286415.1	EMBL	sequence_feature	1407328	1407387	.	+	.	ID=id2352;Note=6 probable transmembrane helices predicted for YE1264 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 128-150%2C157-179 and 194-216;gbkey=misc_feature;gene=ccmB;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1407397	1407465	.	+	.	ID=id2352;Note=6 probable transmembrane helices predicted for YE1264 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 128-150%2C157-179 and 194-216;gbkey=misc_feature;gene=ccmB;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1407556	1407624	.	+	.	ID=id2352;Note=6 probable transmembrane helices predicted for YE1264 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 128-150%2C157-179 and 194-216;gbkey=misc_feature;gene=ccmB;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1407652	1407720	.	+	.	ID=id2352;Note=6 probable transmembrane helices predicted for YE1264 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 128-150%2C157-179 and 194-216;gbkey=misc_feature;gene=ccmB;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1407739	1407807	.	+	.	ID=id2352;Note=6 probable transmembrane helices predicted for YE1264 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 128-150%2C157-179 and 194-216;gbkey=misc_feature;gene=ccmB;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1407850	1407918	.	+	.	ID=id2352;Note=6 probable transmembrane helices predicted for YE1264 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 128-150%2C157-179 and 194-216;gbkey=misc_feature;gene=ccmB;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	1408101	1408838	.	+	.	ID=gene1268;Name=ccmC;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=YE1265
AM286415.1	EMBL	CDS	1408101	1408838	.	+	0	ID=cds1214;Parent=gene1268;Dbxref=EnsemblGenomes-Gn:YE1265,EnsemblGenomes-Tr:CAL11357,GOA:A1JJ61,InterPro:IPR002541,InterPro:IPR003557,UniProtKB/TrEMBL:A1JJ61,NCBI_GP:CAL11357.1;Name=CAL11357.1;gbkey=CDS;gene=ccmC;product=putative heme exporter protein C;protein_id=CAL11357.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1408161	1408229	.	+	.	ID=id2353;Note=6 probable transmembrane helices predicted for YE1265 by TMHMM2.0 at aa 21-43%2C 63-85%2C 92-114%2C 124-146%2C158-180 and 204-226;gbkey=misc_feature;gene=ccmC;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1408287	1408355	.	+	.	ID=id2353;Note=6 probable transmembrane helices predicted for YE1265 by TMHMM2.0 at aa 21-43%2C 63-85%2C 92-114%2C 124-146%2C158-180 and 204-226;gbkey=misc_feature;gene=ccmC;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1408374	1408442	.	+	.	ID=id2353;Note=6 probable transmembrane helices predicted for YE1265 by TMHMM2.0 at aa 21-43%2C 63-85%2C 92-114%2C 124-146%2C158-180 and 204-226;gbkey=misc_feature;gene=ccmC;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1408470	1408538	.	+	.	ID=id2353;Note=6 probable transmembrane helices predicted for YE1265 by TMHMM2.0 at aa 21-43%2C 63-85%2C 92-114%2C 124-146%2C158-180 and 204-226;gbkey=misc_feature;gene=ccmC;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1408572	1408640	.	+	.	ID=id2353;Note=6 probable transmembrane helices predicted for YE1265 by TMHMM2.0 at aa 21-43%2C 63-85%2C 92-114%2C 124-146%2C158-180 and 204-226;gbkey=misc_feature;gene=ccmC;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1408710	1408778	.	+	.	ID=id2353;Note=6 probable transmembrane helices predicted for YE1265 by TMHMM2.0 at aa 21-43%2C 63-85%2C 92-114%2C 124-146%2C158-180 and 204-226;gbkey=misc_feature;gene=ccmC;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1408170	1408784	.	+	.	ID=id2354;Note=Pfam match to entry PF01578 CytC_asm%2C Cytochrome C assembly protein%2C score 202.7%2C E-value 3.8e-58;gbkey=misc_feature;gene=ccmC;inference=protein motif:PFAM:PF01578
AM286415.1	EMBL	gene	1408835	1409080	.	+	.	ID=gene1269;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=YE1266
AM286415.1	EMBL	CDS	1408835	1409080	.	+	0	ID=cds1215;Parent=gene1269;Dbxref=EnsemblGenomes-Gn:YE1266,EnsemblGenomes-Tr:CAL11358,GOA:A1JJA3,InterPro:IPR007078,UniProtKB/TrEMBL:A1JJA3,NCBI_GP:CAL11358.1;Name=CAL11358.1;gbkey=CDS;gene=ccmD;product=putative heme exporter protein D;protein_id=CAL11358.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1408877	1408945	.	+	.	ID=id2355;Note=1 probable transmembrane helix predicted for YE1266 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;gene=ccmD;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1409080	1409574	.	+	.	ID=gene1270;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=YE1267
AM286415.1	EMBL	CDS	1409080	1409574	.	+	0	ID=cds1216;Parent=gene1270;Dbxref=EnsemblGenomes-Gn:YE1267,EnsemblGenomes-Tr:CAL11359,GOA:A1JJC1,InterPro:IPR004329,InterPro:IPR012340,NCBI_GP:CAL11359.1;Name=CAL11359.1;gbkey=CDS;gene=ccmE;product=putative cytochrome c-type biogenesis protein;protein_id=CAL11359.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1409083	1409493	.	+	.	ID=id2356;Note=Pfam match to entry PF03100 CcmE%2C CcmE%2C score 284.9%2C E-value 6.6e-83;gbkey=misc_feature;gene=ccmE;inference=protein motif:PFAM:PF03100
AM286415.1	EMBL	sequence_feature	1409098	1409166	.	+	.	ID=id2357;Note=1 probable transmembrane helix predicted for YE1267 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=ccmE;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1409571	1411538	.	+	.	ID=gene1271;Name=ccmF;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=YE1268
AM286415.1	EMBL	CDS	1409571	1411538	.	+	0	ID=cds1217;Parent=gene1271;Dbxref=EnsemblGenomes-Gn:YE1268,EnsemblGenomes-Tr:CAL11360,GOA:A1JJK5,InterPro:IPR002541,InterPro:IPR003567,InterPro:IPR003568,UniProtKB/TrEMBL:A1JJK5,NCBI_GP:CAL11360.1;Name=CAL11360.1;gbkey=CDS;gene=ccmF;product=putative cytochrome c-type biogenesis protein;protein_id=CAL11360.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1409583	1409639	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=1/15
AM286415.1	EMBL	sequence_feature	1409700	1409759	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=2/15
AM286415.1	EMBL	sequence_feature	1409853	1409912	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=3/15
AM286415.1	EMBL	sequence_feature	1409931	1409999	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=4/15
AM286415.1	EMBL	sequence_feature	1410096	1410164	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=5/15
AM286415.1	EMBL	sequence_feature	1410201	1410269	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=6/15
AM286415.1	EMBL	sequence_feature	1410312	1410365	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=7/15
AM286415.1	EMBL	sequence_feature	1410399	1410467	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=8/15
AM286415.1	EMBL	sequence_feature	1410510	1410566	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=9/15
AM286415.1	EMBL	sequence_feature	1410627	1410695	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=10/15
AM286415.1	EMBL	sequence_feature	1410738	1410806	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=11/15
AM286415.1	EMBL	sequence_feature	1410843	1410902	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=12/15
AM286415.1	EMBL	sequence_feature	1410912	1410980	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=13/15
AM286415.1	EMBL	sequence_feature	1411038	1411106	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=14/15
AM286415.1	EMBL	sequence_feature	1411425	1411478	.	+	.	ID=id2358;Note=15 probable transmembrane helices predicted for YE1268 by TMHMM2.0 at aa 5-23%2C 44-63%2C 95-114%2C 121-143%2C176-198%2C 211-233%2C 248-265%2C 277-299%2C 314-332%2C 353-375%2C390-412%2C 425-444%2C 448-470%2C 490-512 and 619-636;gbkey=misc_feature;gene=ccmF;inference=protein motif:TMHMM:2.0;part=15/15
AM286415.1	EMBL	sequence_feature	1409853	1409885	.	+	.	ID=id2359;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ccmF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1410276	1410929	.	+	.	ID=id2360;Note=Pfam match to entry PF01578 CytC_asm%2C Cytochrome C assembly protein%2C score 184.7%2C E-value 9.5e-53;gbkey=misc_feature;gene=ccmF;inference=protein motif:PFAM:PF01578
AM286415.1	EMBL	gene	1411538	1412104	.	+	.	ID=gene1272;Name=ccmG;gbkey=Gene;gene=ccmG;gene_biotype=protein_coding;gene_synonym=dsbE;locus_tag=YE1269
AM286415.1	EMBL	CDS	1411538	1412104	.	+	0	ID=cds1218;Parent=gene1272;Dbxref=EnsemblGenomes-Gn:YE1269,EnsemblGenomes-Tr:CAL11361,GOA:A1JK00,InterPro:IPR004799,InterPro:IPR012336,InterPro:IPR013740,InterPro:IPR017937,UniProtKB/TrEMBL:A1JK00,NCBI_GP:CAL11361.1;Name=CAL11361.1;gbkey=CDS;gene=ccmG;product=thiol:disulfide interchange protein DsbE;protein_id=CAL11361.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1411565	1411618	.	+	.	ID=id2361;Note=1 probable transmembrane helix predicted for YE1269 by TMHMM2.0 at aa 10-27;gbkey=misc_feature;gene=ccmG;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1411766	1411822	.	+	.	ID=id2362;Note=PS00194 Thioredoxin family active site.;gbkey=misc_feature;gene=ccmG;inference=protein motif:Prosite:PS00194
AM286415.1	EMBL	gene	1412197	1412607	.	+	.	ID=gene1273;Name=ccmH;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=YE1270
AM286415.1	EMBL	CDS	1412197	1412607	.	+	0	ID=cds1219;Parent=gene1273;Dbxref=EnsemblGenomes-Gn:YE1270,EnsemblGenomes-Tr:CAL11362,InterPro:IPR005616,UniProtKB/TrEMBL:A1JK03,NCBI_GP:CAL11362.1;Name=CAL11362.1;gbkey=CDS;gene=ccmH;product=putative cytochrome c-type biogenesis protein;protein_id=CAL11362.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1412200	1412553	.	+	.	ID=id2363;Note=Pfam match to entry PF03918 CcmH%2C Cytochrome C biogenesis protein%2C score 189.9%2C E-value 2.7e-54;gbkey=misc_feature;gene=ccmH;inference=protein motif:PFAM:PF03918
AM286415.1	EMBL	sequence_feature	1412410	1412478	.	+	.	ID=id2364;Note=1 probable transmembrane helix predicted for YE1270 by TMHMM2.0 at aa 72-94;gbkey=misc_feature;gene=ccmH;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1412607	1413827	.	+	.	ID=gene1274;Name=vacJ;gbkey=Gene;gene=vacJ;gene_biotype=protein_coding;locus_tag=YE1271
AM286415.1	EMBL	CDS	1412607	1413827	.	+	0	ID=cds1220;Parent=gene1274;Dbxref=EnsemblGenomes-Gn:YE1271,EnsemblGenomes-Tr:CAL11363,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR017560,InterPro:IPR019734,UniProtKB/TrEMBL:A1JK06,NCBI_GP:CAL11363.1;Name=CAL11363.1;gbkey=CDS;gene=vacJ;product=VacJ lipoprotein;protein_id=CAL11363.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1412616	1412675	.	+	.	ID=id2365;Note=2 probable transmembrane helices predicted for YE1271 by TMHMM2.0 at aa 4-23 and 90-108;gbkey=misc_feature;gene=vacJ;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1412874	1412930	.	+	.	ID=id2365;Note=2 probable transmembrane helices predicted for YE1271 by TMHMM2.0 at aa 4-23 and 90-108;gbkey=misc_feature;gene=vacJ;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	1413864	1414628	.	+	.	ID=gene1275;Name=vacJ;gbkey=Gene;gene=vacJ;gene_biotype=protein_coding;locus_tag=YE1272
AM286415.1	EMBL	CDS	1413864	1414628	.	+	0	ID=cds1221;Parent=gene1275;Dbxref=EnsemblGenomes-Gn:YE1272,EnsemblGenomes-Tr:CAL11364,GOA:A1JK10,InterPro:IPR007428,UniProtKB/TrEMBL:A1JK10,NCBI_GP:CAL11364.1;Name=CAL11364.1;gbkey=CDS;gene=vacJ;product=VacJ lipoprotein;protein_id=CAL11364.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1413885	1413917	.	+	.	ID=id2366;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=vacJ;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1414914	1415177	.	+	.	ID=gene1276;Name=YE1273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1273
AM286415.1	EMBL	CDS	1414914	1415177	.	+	0	ID=cds1222;Parent=gene1276;Dbxref=EnsemblGenomes-Gn:YE1273,EnsemblGenomes-Tr:CAL11365,UniProtKB/TrEMBL:A1JK15,NCBI_GP:CAL11365.1;Name=CAL11365.1;Note=Weakly similar to Escherichia coli%2C and Escherichia coli O157:H7 PemI-like protein 1 ChpR or maze or chpai or b2783 or z4098 or ecs3643 SWALL:CHPR_ECOLI (SWALL:P18534) (82 aa) fasta scores: E(): 0.012%2C 27.84 38d in 79 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P18534;product=hypothetical protein;protein_id=CAL11365.1;transl_table=11
AM286415.1	EMBL	gene	1415768	1417042	.	-	.	ID=gene1277;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;gene_synonym=ttr;locus_tag=YE1274
AM286415.1	EMBL	CDS	1415768	1417042	.	-	0	ID=cds1223;Parent=gene1277;Dbxref=EnsemblGenomes-Gn:YE1274,EnsemblGenomes-Tr:CAL11366,InterPro:IPR005017,UniProtKB/TrEMBL:A1JK18,NCBI_GP:CAL11366.1;Name=CAL11366.1;gbkey=CDS;gene=fadL;product=putative long-chain fatty acid transport protein;protein_id=CAL11366.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1416806	1416853	.	-	.	ID=id2367;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;gene=fadL;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	gene	1417467	1417778	.	+	.	ID=gene1278;Name=YE1275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1275
AM286415.1	EMBL	CDS	1417467	1417778	.	+	0	ID=cds1224;Parent=gene1278;Dbxref=EnsemblGenomes-Gn:YE1275,EnsemblGenomes-Tr:CAL11367,InterPro:IPR005272,UniProtKB/TrEMBL:A1JK21,NCBI_GP:CAL11367.1;Name=CAL11367.1;Note=Similar to Yersinia pestis hypothetical protein Ypo2745 SWALL:Q8ZD47 (EMBL:AJ414153) (98 aa) fasta scores: E(): 1.3e-32%2C 82.52 38d in 103 aa and to Escherichia coli O157:H7 hypothetical protein Z3606 or Ecs3226 SWALL:Q8XCN7 (EMBL:AE005466) (102 aa) fasta scores: E(): 7.9e-25%2C68.75 38d in 96 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414153;product=conserved hypothetical protein;protein_id=CAL11367.1;transl_table=11
AM286415.1	EMBL	gene	1418075	1419385	.	+	.	ID=gene1279;Name=YE1276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1276
AM286415.1	EMBL	CDS	1418075	1419385	.	+	0	ID=cds1225;Parent=gene1279;Dbxref=EnsemblGenomes-Gn:YE1276,EnsemblGenomes-Tr:CAL11368,GOA:A1JK23,InterPro:IPR002155,InterPro:IPR012806,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR020610,InterPro:IPR020613,InterPro:IPR020615,InterPro:IPR020616,InterPro:IPR020617,NCBI_GP:CAL11368.1;Name=CAL11368.1;gbkey=CDS;product=putative 3-ketoacyl-CoA thiolase;protein_id=CAL11368.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1418108	1418938	.	+	.	ID=id2368;Note=Pfam match to entry PF00108 thiolase%2C Thiolase%2CN-terminal domain%2C score 251.7%2C E-value 6.3e-73;gbkey=misc_feature;inference=protein motif:PFAM:PF00108
AM286415.1	EMBL	sequence_feature	1418357	1418413	.	+	.	ID=id2369;Note=PS00098 Thiolases acyl-enzyme intermediate signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00098
AM286415.1	EMBL	sequence_feature	1418951	1419379	.	+	.	ID=id2370;Note=Pfam match to entry PF02803 thiolase_C%2C Thiolase%2CC-terminal domain%2C score 191.0%2C E-value 1.3e-54;gbkey=misc_feature;inference=protein motif:PFAM:PF02803
AM286415.1	EMBL	sequence_feature	1419218	1419268	.	+	.	ID=id2371;Note=PS00737 Thiolases signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00737
AM286415.1	EMBL	sequence_feature	1419323	1419364	.	+	.	ID=id2372;Note=PS00099 Thiolases active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00099
AM286415.1	EMBL	gene	1419523	1421622	.	+	.	ID=gene1280;Name=faoA;gbkey=Gene;gene=faoA;gene_biotype=protein_coding;locus_tag=YE1277
AM286415.1	EMBL	CDS	1419523	1421622	.	+	0	ID=cds1226;Parent=gene1280;Dbxref=EnsemblGenomes-Gn:YE1277,EnsemblGenomes-Tr:CAL11369,GOA:A1JK30,InterPro:IPR001753,InterPro:IPR006108,InterPro:IPR006176,InterPro:IPR006180,InterPro:IPR008927,InterPro:IPR012802,InterPro:IPR013328,InterPro:IPR016040,InterPro:IPR029045,NCBI_GP:CAL11369.1;Name=CAL11369.1;gbkey=CDS;gene=faoA;product=putative fatty oxidation complex alpha subunit%2Cenoyl-CoA hydratase;protein_id=CAL11369.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1419523	1420011	.	+	.	ID=id2373;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 207.6%2C E-value 1.3e-59;gbkey=misc_feature;gene=faoA;inference=protein motif:PFAM:PF00378
AM286415.1	EMBL	sequence_feature	1420354	1420911	.	+	.	ID=id2374;Note=Pfam match to entry PF02737 3HCDH_N%2C3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain %2Cscore 300.3%2C E-value 1.6e-87;gbkey=misc_feature;gene=faoA;inference=protein motif:PFAM:PF02737
AM286415.1	EMBL	sequence_feature	1420906	1420980	.	+	.	ID=id2375;Note=PS00067 3-hydroxyacyl-CoA dehydrogenase signature.;gbkey=misc_feature;gene=faoA;inference=protein motif:Prosite:PS00067
AM286415.1	EMBL	sequence_feature	1420915	1421196	.	+	.	ID=id2376;Note=Pfam match to entry PF00725 3HCDH%2C3-hydroxyacyl-CoA dehydrogenase%2C C-terminal domain%2C score 135.1%2C E-value 8.1e-38;gbkey=misc_feature;gene=faoA;inference=protein motif:PFAM:PF00725
AM286415.1	EMBL	gene	1422004	1422495	.	+	.	ID=gene1281;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=YE1278
AM286415.1	EMBL	CDS	1422004	1422495	.	+	0	ID=cds1227;Parent=gene1281;Dbxref=EnsemblGenomes-Gn:YE1278,EnsemblGenomes-Tr:CAL11370,GOA:A1JK35,InterPro:IPR004449,InterPro:IPR013078,InterPro:IPR029033,UniProtKB/TrEMBL:A1JK35,NCBI_GP:CAL11370.1;Name=CAL11370.1;gbkey=CDS;gene=sixA;product=putative phosphohistidine phosphatase;protein_id=CAL11370.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1422376	1422408	.	+	.	ID=id2377;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=sixA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1422623	1423153	.	-	.	ID=gene1282;Name=YE1279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1279
AM286415.1	EMBL	CDS	1422623	1423153	.	-	0	ID=cds1228;Parent=gene1282;Dbxref=EnsemblGenomes-Gn:YE1279,EnsemblGenomes-Tr:CAL11371,InterPro:IPR002625,InterPro:IPR022990,NCBI_GP:CAL11371.1;Name=CAL11371.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11371.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1422635	1422862	.	-	.	ID=id2378;Note=Pfam match to entry PF01713 Smr%2C Smr domain%2C score 121.4%2C E-value 1.1e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF01713
AM286415.1	EMBL	gene	1423360	1424292	.	+	.	ID=gene1283;Name=YE1280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1280
AM286415.1	EMBL	CDS	1423360	1424292	.	+	0	ID=cds1229;Parent=gene1283;Dbxref=EnsemblGenomes-Gn:YE1280,EnsemblGenomes-Tr:CAL11372,GOA:A1JK41,InterPro:IPR002052,InterPro:IPR004556,InterPro:IPR007848,InterPro:IPR017127,InterPro:IPR029063,UniProtKB/TrEMBL:A1JK41,NCBI_GP:CAL11372.1;Name=CAL11372.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11372.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1423777	1423809	.	+	.	ID=id2379;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1423969	1423989	.	+	.	ID=id2380;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	1424369	1425454	.	+	.	ID=gene1284;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=YE1281
AM286415.1	EMBL	CDS	1424369	1425454	.	+	0	ID=cds1230;Parent=gene1284;Dbxref=EnsemblGenomes-Gn:YE1281,EnsemblGenomes-Tr:CAL11373,GOA:A1JK48,InterPro:IPR000453,InterPro:IPR020541,NCBI_GP:CAL11373.1;Name=CAL11373.1;gbkey=CDS;gene=aroC;product=chorismate synthase;protein_id=CAL11373.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1424396	1425412	.	+	.	ID=id2381;Note=Pfam match to entry PF01264 Chorismate_synt%2CChorismate synthase%2C score 796.6%2C E-value 6.1e-237;gbkey=misc_feature;gene=aroC;inference=protein motif:PFAM:PF01264
AM286415.1	EMBL	sequence_feature	1424414	1424461	.	+	.	ID=id2382;Note=PS00787 Chorismate synthase signature 1.;gbkey=misc_feature;gene=aroC;inference=protein motif:Prosite:PS00787
AM286415.1	EMBL	sequence_feature	1424738	1424782	.	+	.	ID=id2383;Note=PS00788 Chorismate synthase signature 2.;gbkey=misc_feature;gene=aroC;inference=protein motif:Prosite:PS00788
AM286415.1	EMBL	sequence_feature	1425323	1425373	.	+	.	ID=id2384;Note=PS00789 Chorismate synthase signature 3.;gbkey=misc_feature;gene=aroC;inference=protein motif:Prosite:PS00789
AM286415.1	EMBL	gene	1425460	1426287	.	+	.	ID=gene1285;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=YE1282
AM286415.1	EMBL	CDS	1425460	1426287	.	+	0	ID=cds1231;Parent=gene1285;Dbxref=EnsemblGenomes-Gn:YE1282,EnsemblGenomes-Tr:CAL11374,GOA:A1JK62,InterPro:IPR005073,InterPro:IPR009045,NCBI_GP:CAL11374.1;Name=CAL11374.1;gbkey=CDS;gene=mepA;product=putative penicillin-insensitive murein endopeptidase;protein_id=CAL11374.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1425562	1426278	.	+	.	ID=id2385;Note=Pfam match to entry PF03411 Peptidase_U6%2CPenicillin-insensitive murein endopeptidase%2C score 499.0%2CE-value 2.4e-147;gbkey=misc_feature;gene=mepA;inference=protein motif:PFAM:PF03411
AM286415.1	EMBL	gene	1426291	1427097	.	+	.	ID=gene1286;Name=yfcA;gbkey=Gene;gene=yfcA;gene_biotype=protein_coding;locus_tag=YE1283
AM286415.1	EMBL	CDS	1426291	1427097	.	+	0	ID=cds1232;Parent=gene1286;Dbxref=EnsemblGenomes-Gn:YE1283,EnsemblGenomes-Tr:CAL11375,GOA:A1JKG2,InterPro:IPR002781,UniProtKB/TrEMBL:A1JKG2,NCBI_GP:CAL11375.1;Name=CAL11375.1;gbkey=CDS;gene=yfcA;product=putative membrane protein;protein_id=CAL11375.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1426300	1426359	.	+	.	ID=id2386;Note=7 probable transmembrane helices predicted for YE1283 by TMHMM2.0 at aa 4-23%2C 30-52%2C 81-97%2C 104-123%2C154-176%2C 196-218 and 233-251;gbkey=misc_feature;gene=yfcA;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1426378	1426446	.	+	.	ID=id2386;Note=7 probable transmembrane helices predicted for YE1283 by TMHMM2.0 at aa 4-23%2C 30-52%2C 81-97%2C 104-123%2C154-176%2C 196-218 and 233-251;gbkey=misc_feature;gene=yfcA;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1426531	1426581	.	+	.	ID=id2386;Note=7 probable transmembrane helices predicted for YE1283 by TMHMM2.0 at aa 4-23%2C 30-52%2C 81-97%2C 104-123%2C154-176%2C 196-218 and 233-251;gbkey=misc_feature;gene=yfcA;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1426600	1426659	.	+	.	ID=id2386;Note=7 probable transmembrane helices predicted for YE1283 by TMHMM2.0 at aa 4-23%2C 30-52%2C 81-97%2C 104-123%2C154-176%2C 196-218 and 233-251;gbkey=misc_feature;gene=yfcA;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1426750	1426818	.	+	.	ID=id2386;Note=7 probable transmembrane helices predicted for YE1283 by TMHMM2.0 at aa 4-23%2C 30-52%2C 81-97%2C 104-123%2C154-176%2C 196-218 and 233-251;gbkey=misc_feature;gene=yfcA;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1426876	1426944	.	+	.	ID=id2386;Note=7 probable transmembrane helices predicted for YE1283 by TMHMM2.0 at aa 4-23%2C 30-52%2C 81-97%2C 104-123%2C154-176%2C 196-218 and 233-251;gbkey=misc_feature;gene=yfcA;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1426987	1427043	.	+	.	ID=id2386;Note=7 probable transmembrane helices predicted for YE1283 by TMHMM2.0 at aa 4-23%2C 30-52%2C 81-97%2C 104-123%2C154-176%2C 196-218 and 233-251;gbkey=misc_feature;gene=yfcA;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	1426564	1427040	.	+	.	ID=id2387;Note=Pfam match to entry PF01925 DUF81%2C Domain of unknown function DUF81%2C score 132.2%2C E-value 6.4e-37;gbkey=misc_feature;gene=yfcA;inference=protein motif:PFAM:PF01925
AM286415.1	EMBL	sequence_feature	1426999	1427031	.	+	.	ID=id2388;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yfcA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1427181	1427723	.	+	.	ID=gene1287;Name=YE1284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1284
AM286415.1	EMBL	CDS	1427181	1427723	.	+	0	ID=cds1233;Parent=gene1287;Dbxref=EnsemblGenomes-Gn:YE1284,EnsemblGenomes-Tr:CAL11376,InterPro:IPR007411,UniProtKB/TrEMBL:A1JKL0,NCBI_GP:CAL11376.1;Name=CAL11376.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11376.1;transl_table=11
AM286415.1	EMBL	gene	1427974	1428249	.	+	.	ID=gene1288;Name=YE1285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1285
AM286415.1	EMBL	CDS	1427974	1428249	.	+	0	ID=cds1234;Parent=gene1288;Dbxref=EnsemblGenomes-Gn:YE1285,EnsemblGenomes-Tr:CAL11377,InterPro:IPR014987,UniProtKB/TrEMBL:A1JKL3,NCBI_GP:CAL11377.1;Name=CAL11377.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11377.1;transl_table=11
AM286415.1	EMBL	gene	1428355	1430187	.	-	.	ID=gene1289;Name=YE1286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1286
AM286415.1	EMBL	CDS	1428355	1430187	.	-	0	ID=cds1235;Parent=gene1289;Dbxref=EnsemblGenomes-Gn:YE1286,EnsemblGenomes-Tr:CAL11378,GOA:A1JKL6,InterPro:IPR006076,InterPro:IPR008471,InterPro:IPR017610,InterPro:IPR023032,InterPro:IPR029063,NCBI_GP:CAL11378.1;Name=CAL11378.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11378.1;transl_table=11
AM286415.1	EMBL	gene	1430569	1431792	.	+	.	ID=gene1290;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;gene_synonym=fabC;locus_tag=YE1287
AM286415.1	EMBL	CDS	1430569	1431792	.	+	0	ID=cds1236;Parent=gene1290;Dbxref=EnsemblGenomes-Gn:YE1287,EnsemblGenomes-Tr:CAL11379,GOA:A1JKM0,InterPro:IPR014030,InterPro:IPR014031,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR018201,UniProtKB/TrEMBL:A1JKM0,NCBI_GP:CAL11379.1;Name=CAL11379.1;gbkey=CDS;gene=fabB;product=3-oxoacyl-[acyl-carrier-protein] synthase I;protein_id=CAL11379.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1430569	1431309	.	+	.	ID=id2389;Note=Pfam match to entry PF00109 ketoacyl-synt%2CBeta-ketoacyl synthase%2C N-terminal domain%2C score 195.2%2CE-value 6.8e-56;gbkey=misc_feature;gene=fabB;inference=protein motif:PFAM:PF00109
AM286415.1	EMBL	sequence_feature	1431031	1431081	.	+	.	ID=id2390;Note=PS00606 Beta-ketoacyl synthases active site.;gbkey=misc_feature;gene=fabB;inference=protein motif:Prosite:PS00606
AM286415.1	EMBL	sequence_feature	1431331	1431786	.	+	.	ID=id2391;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2CBeta-ketoacyl synthase%2C C-terminal domain%2C score 212.1%2CE-value 5.4e-61;gbkey=misc_feature;gene=fabB;inference=protein motif:PFAM:PF02801
AM286415.1	EMBL	sequence_feature	1431562	1431594	.	+	.	ID=id2392;Note=PS00639 Eukaryotic thiol (cysteine) proteases histidine active site.;gbkey=misc_feature;gene=fabB;inference=protein motif:Prosite:PS00639
AM286415.1	EMBL	gene	1432211	1433218	.	+	.	ID=gene1291;Name=YE1288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1288
AM286415.1	EMBL	CDS	1432211	1433218	.	+	0	ID=cds1237;Parent=gene1291;Dbxref=EnsemblGenomes-Gn:YE1288,EnsemblGenomes-Tr:CAL11380,GOA:A1JKM7,InterPro:IPR000014,InterPro:IPR000160,InterPro:IPR000700,InterPro:IPR001610,InterPro:IPR013655,InterPro:IPR029787,UniProtKB/TrEMBL:A1JKM7,NCBI_GP:CAL11380.1;Name=CAL11380.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa0338 SWALL:Q9I6F5 (EMBL:AE004471) (376 aa) fasta scores: E(): 2.5e-44%2C 43.43 38d in 320 aa and to Aquifex aeolicus hypothetical protein Aq_689 aq_689 SWALL:O66912 (EMBL:AE000702) (336 aa) fasta scores: E(): 6e-19%2C 29.08 id in 337 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004471;product=conserved hypothetical protein;protein_id=CAL11380.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1432487	1432618	.	+	.	ID=id2393;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 42.7%2C E-value 5.6e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1432733	1433206	.	+	.	ID=id2394;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 169.7%2C E-value 3.1e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	gene	1433256	1433954	.	-	.	ID=gene1292;Name=YE1289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1289
AM286415.1	EMBL	CDS	1433256	1433954	.	-	0	ID=cds1238;Parent=gene1292;Dbxref=EnsemblGenomes-Gn:YE1289,EnsemblGenomes-Tr:CAL11381,GOA:A1JKN0,InterPro:IPR001920,InterPro:IPR004380,InterPro:IPR015942,UniProtKB/TrEMBL:A1JKN0,NCBI_GP:CAL11381.1;Name=CAL11381.1;gbkey=CDS;product=putative aspartate/glutamate racemase;protein_id=CAL11381.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1433262	1433927	.	-	.	ID=id2395;Note=Pfam match to entry PF01177 Asp_Glu_race%2CAsp/Glu/Hydontoin racemase%2C score 149.0%2C E-value 5.4e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF01177
AM286415.1	EMBL	sequence_feature	1433688	1433717	.	-	.	ID=id2396;Note=PS00923 Aspartate and glutamate racemases signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00923
AM286415.1	EMBL	gene	1434169	1435563	.	-	.	ID=gene1293;Name=YE1290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1290
AM286415.1	EMBL	CDS	1434169	1435563	.	-	0	ID=cds1239;Parent=gene1293;Dbxref=EnsemblGenomes-Gn:YE1290,EnsemblGenomes-Tr:CAL11382,GOA:A1JKN2,InterPro:IPR003192,UniProtKB/TrEMBL:A1JKN2,NCBI_GP:CAL11382.1;Name=CAL11382.1;Note=Weakly similar to many maltoporins including: Yersinia pestis maltoporin precursor 1 LamB1 or LamB or Ypo3711 or y0032 SWALL:LMB1_YERPE (SWALL:Q8ZAS9) (423 aa) fasta scores: E(): 2.4e-14%2C 27.19 38d in 445 aa and to Klebsiella pneumoniae maltoporin precursor LamB SWALL:LAMB_KLEPN (SWALL:P31242) (429 aa) fasta scores: E(): 6.3e-12%2C 24.76 38d in 424 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q8ZAS9;product=putative exported protein;protein_id=CAL11382.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1434172	1434456	.	-	.	ID=id2397;Note=Pfam match to entry PF02264 LamB%2C LamB porin %2Cscore 39.8%2C E-value 1.6e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF02264
AM286415.1	EMBL	gene	1435952	1436254	.	-	.	ID=gene1294;Name=YE1291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1291
AM286415.1	EMBL	CDS	1435952	1436254	.	-	0	ID=cds1240;Parent=gene1294;Dbxref=EnsemblGenomes-Gn:YE1291,EnsemblGenomes-Tr:CAL11383,GOA:A1JKN7,InterPro:IPR003188,UniProtKB/TrEMBL:A1JKN7,NCBI_GP:CAL11383.1;Name=CAL11383.1;Note=Similar to many PTS system proteins including: Escherichia coli%2C and Escherichia coli O157:H7 PTS system%2Ccellobiose-specific IIA component CelC or b1736 or z2766 or ecs2442 SWALL:PTCA_ECOLI (SWALL:P17335) (116 aa) fasta scores: E(): 4.6e-16%2C 52.04 38d in 98 aa%2C Vibrio cholerae PTS system%2C cellobiose-specific IIA component Vc1283 SWALL:Q9KSH3 (EMBL:AE004207) (111 aa) fasta scores: E(): 2.4e-15%2C 52.04 38d in 98 aa and to Yersinia pestis PTS system%2C cellobiose-specific IIA component CelC or ypo2680 SWALL:Q8ZDA8 (EMBL:AJ414153) (115 aa) fasta scores: E(): 1.6e-14%2C 49.48 38d in 97 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P17335;product=putative PTS system protein;protein_id=CAL11383.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1435955	1436242	.	-	.	ID=id2398;Note=Pfam match to entry PF02255 PTS_IIA%2C PTS system%2CLactose/Cellobiose specific IIA subunit%2C score 143.7%2CE-value 2.1e-40;gbkey=misc_feature;inference=protein motif:PFAM:PF02255
AM286415.1	EMBL	gene	1436269	1437651	.	-	.	ID=gene1295;Name=YE1292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1292
AM286415.1	EMBL	CDS	1436269	1437651	.	-	0	ID=cds1241;Parent=gene1295;Dbxref=EnsemblGenomes-Gn:YE1292,EnsemblGenomes-Tr:CAL11384,GOA:A1JKP0,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018120,UniProtKB/TrEMBL:A1JKP0,NCBI_GP:CAL11384.1;Name=CAL11384.1;Note=Similar to many putative glycosyl hydrolases including: Salmonella typhi Sty4009 SWALL:Q8Z2J8 (EMBL:AL627280) (460 aa) fasta scores: E(): 4.5e-174%2C83.04 38d in 460 aa%2C Listeria monocytogenes hypothetical protein Lmo0574 SWALL:Q8Y9F4 (EMBL:AL591975) (464 aa) fasta scores: E(): 4.6e-132%2C 63.71 38d in 463 aa and Caldocellum saccharolyticum beta-glucosidase a BglA SWALL:BGLS_CALSA (SWALL:P10482) (455 aa) fasta scores: E(): 3e-53%2C 33.26 38d in 463 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P10482;product=putative glycosyl hydrolase;protein_id=CAL11384.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1436272	1437651	.	-	.	ID=id2399;Note=Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1%2C score 460.6%2C E-value 8.6e-136;gbkey=misc_feature;inference=protein motif:PFAM:PF00232
AM286415.1	EMBL	sequence_feature	1436548	1436574	.	-	.	ID=id2400;Note=PS00572 Glycosyl hydrolases family 1 active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00572
AM286415.1	EMBL	gene	1437668	1438999	.	-	.	ID=gene1296;Name=YE1293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1293
AM286415.1	EMBL	CDS	1437668	1438999	.	-	0	ID=cds1242;Parent=gene1296;Dbxref=EnsemblGenomes-Gn:YE1293,EnsemblGenomes-Tr:CAL11385,GOA:A1JKP6,InterPro:IPR003352,InterPro:IPR004501,InterPro:IPR004796,UniProtKB/TrEMBL:A1JKP6,NCBI_GP:CAL11385.1;Name=CAL11385.1;Note=Similar to many PTS system proteins including: Vibrio cholerae PTS system%2C cellobiose-specific IIC component vc1282 SWALL:Q9KSH4 (EMBL:AE004207) (446 aa) fasta scores: E(): 6.3e-91%2C 47.86 38d in 422 aa%2CLactobacillus casei PTS system%2C lactose-specific IIBC component LacE SWALL:PTLB_LACCA (SWALL:P24400) (577 aa) fasta scores: E(): 4.9e-42%2C 31.83 38d in 446 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P24400;product=putative PTS system protein;protein_id=CAL11385.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1438826	1438894	.	-	.	ID=id2401;Note=10 probable transmembrane helices predicted for YE1293 by TMHMM2.0 at aa 36-58%2C 78-100%2C 107-129%2C 139-161%2C181-203%2C 213-235%2C 240-262%2C 284-306%2C 338-360 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1438700	1438768	.	-	.	ID=id2401;Note=10 probable transmembrane helices predicted for YE1293 by TMHMM2.0 at aa 36-58%2C 78-100%2C 107-129%2C 139-161%2C181-203%2C 213-235%2C 240-262%2C 284-306%2C 338-360 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1438613	1438681	.	-	.	ID=id2401;Note=10 probable transmembrane helices predicted for YE1293 by TMHMM2.0 at aa 36-58%2C 78-100%2C 107-129%2C 139-161%2C181-203%2C 213-235%2C 240-262%2C 284-306%2C 338-360 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1438517	1438585	.	-	.	ID=id2401;Note=10 probable transmembrane helices predicted for YE1293 by TMHMM2.0 at aa 36-58%2C 78-100%2C 107-129%2C 139-161%2C181-203%2C 213-235%2C 240-262%2C 284-306%2C 338-360 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1438391	1438459	.	-	.	ID=id2401;Note=10 probable transmembrane helices predicted for YE1293 by TMHMM2.0 at aa 36-58%2C 78-100%2C 107-129%2C 139-161%2C181-203%2C 213-235%2C 240-262%2C 284-306%2C 338-360 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1438295	1438363	.	-	.	ID=id2401;Note=10 probable transmembrane helices predicted for YE1293 by TMHMM2.0 at aa 36-58%2C 78-100%2C 107-129%2C 139-161%2C181-203%2C 213-235%2C 240-262%2C 284-306%2C 338-360 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1438214	1438282	.	-	.	ID=id2401;Note=10 probable transmembrane helices predicted for YE1293 by TMHMM2.0 at aa 36-58%2C 78-100%2C 107-129%2C 139-161%2C181-203%2C 213-235%2C 240-262%2C 284-306%2C 338-360 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1438082	1438150	.	-	.	ID=id2401;Note=10 probable transmembrane helices predicted for YE1293 by TMHMM2.0 at aa 36-58%2C 78-100%2C 107-129%2C 139-161%2C181-203%2C 213-235%2C 240-262%2C 284-306%2C 338-360 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1437920	1437988	.	-	.	ID=id2401;Note=10 probable transmembrane helices predicted for YE1293 by TMHMM2.0 at aa 36-58%2C 78-100%2C 107-129%2C 139-161%2C181-203%2C 213-235%2C 240-262%2C 284-306%2C 338-360 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1437758	1437826	.	-	.	ID=id2401;Note=10 probable transmembrane helices predicted for YE1293 by TMHMM2.0 at aa 36-58%2C 78-100%2C 107-129%2C 139-161%2C181-203%2C 213-235%2C 240-262%2C 284-306%2C 338-360 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	1437944	1438867	.	-	.	ID=id2402;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score -111.3%2C E-value 0.013;gbkey=misc_feature;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	gene	1439012	1439326	.	-	.	ID=gene1297;Name=YE1294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1294
AM286415.1	EMBL	CDS	1439012	1439326	.	-	0	ID=cds1243;Parent=gene1297;Dbxref=EnsemblGenomes-Gn:YE1294,EnsemblGenomes-Tr:CAL11386,GOA:A1JKQ8,InterPro:IPR003501,InterPro:IPR013012,UniProtKB/TrEMBL:A1JKQ8,NCBI_GP:CAL11386.1;Name=CAL11386.1;Note=Similar to Vibrio cholerae PTS system%2Ccellobiose-specific IIB component Vc1281 SWALL:Q9KSH5 (EMBL:AE004207) (101 aa) fasta scores: E(): 4.5e-15%2C51.48 38d in 101 aa and to Bacillus stearothermophilus PTS system%2C cellobiose-specific IIB component CelA SWALL:PTCB_BACST (SWALL:Q45399) (100 aa) fasta scores: E(): 3.8e-11%2C 44.79 38d in 96 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q45399;product=putative exported PTS system protein;protein_id=CAL11386.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1439048	1439323	.	-	.	ID=id2403;Note=Pfam match to entry PF02302 PTS_IIB%2C PTS system%2CLactose/Cellobiose specific IIB subunit%2C score 115.2%2CE-value 7.9e-32;gbkey=misc_feature;inference=protein motif:PFAM:PF02302
AM286415.1	EMBL	sequence_feature	1439675	1439758	.	+	.	ID=id2404;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 41.0%2C E-value 1.8e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	gene	1439678	1440634	.	+	.	ID=gene1298;Name=YE1295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1295
AM286415.1	EMBL	CDS	1439678	1440634	.	+	0	ID=cds1244;Parent=gene1298;Dbxref=EnsemblGenomes-Gn:YE1295,EnsemblGenomes-Tr:CAL11387,GOA:A1JKR3,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JKR3,NCBI_GP:CAL11387.1;Name=CAL11387.1;Note=Similar to Clostridium acetobutylicum transcriptional regulator%2C LacI family Cac0360 SWALL:Q97M40 (EMBL:AE007550) (328 aa) fasta scores: E(): 3.5e-12%2C 25.41 38d in 303 aa and to Haemophilus influenzae galactose operon repressor GalR or gals or hi0821 SWALL:GALR_HAEIN (SWALL:P31766) (332 aa) fasta scores: E(): 6.5e-09%2C 29.33 38d in 300 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P31766;product=putative LacI-family transcriptional regulatory protein;protein_id=CAL11387.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1439681	1439746	.	+	.	ID=id2405;Note=Predicted helix-turn-helix motif with score 1759.000%2C SD 5.18 at aa 22-43%2C sequence STINDVSRLAGVSKATVSRVLS;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1439852	1440616	.	+	.	ID=id2406;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score -51.1%2C E-value 0.026;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	1440917	1442218	.	+	.	ID=gene1299;Name=YE1296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1296
AM286415.1	EMBL	CDS	1440917	1442218	.	+	0	ID=cds1245;Parent=gene1299;Dbxref=EnsemblGenomes-Gn:YE1296,EnsemblGenomes-Tr:CAL11388,GOA:A1JKR8,InterPro:IPR000560,InterPro:IPR029033,UniProtKB/TrEMBL:A1JKR8,NCBI_GP:CAL11388.1;Name=CAL11388.1;Note=Similar to Escherichia coli glucose-1-phosphatase precursor Agp or b1002 SWALL:AGP_ECOLI (SWALL:P19926) (413 aa) fasta scores: E(): 9.1e-52%2C 49.65 38d in 429 aa%2C and to Salmonella typhimurium glucose-1-phosphatase precursor Agp or Stm1117 SWALL:AGP_SALTY (SWALL:O33921) (413 aa) fasta scores: E(): 2.6e-49%2C 47.8 38d in 410 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P19926;product=putative phosphatase;protein_id=CAL11388.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1441010	1442152	.	+	.	ID=id2407;Note=Pfam match to entry PF00328 acid_phosphat%2CHistidine acid phosphatase%2C score 155.4%2C E-value 6.6e-44;gbkey=misc_feature;inference=protein motif:PFAM:PF00328
AM286415.1	EMBL	sequence_feature	1441016	1441060	.	+	.	ID=id2408;Note=PS00616 Histidine acid phosphatases phosphohistidine signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00616
AM286415.1	EMBL	sequence_feature	1441886	1441936	.	+	.	ID=id2409;Note=PS00778 Histidine acid phosphatases active site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00778
AM286415.1	EMBL	gene	1442334	1443467	.	+	.	ID=gene1300;Name=YE1297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1297
AM286415.1	EMBL	CDS	1442334	1443467	.	+	0	ID=cds1246;Parent=gene1300;Dbxref=EnsemblGenomes-Gn:YE1297,EnsemblGenomes-Tr:CAL11389,GOA:A1JKT9,InterPro:IPR004680,UniProtKB/TrEMBL:A1JKT9,NCBI_GP:CAL11389.1;Name=CAL11389.1;Note=Similar to Escherichia coli hypothetical protein YbiR or b0818 SWALL:YBIR_ECOLI (SWALL:P75788) (372 aa) fasta scores: E(): 1.4e-78%2C 57.53 38d in 365 aa and to Salmonella typhi putative membrane protein YbiR or Sty0877 SWALL:Q8Z871 (EMBL:AL627268) (370 aa) fasta scores: E(): 1.8e-78%2C 58.95 38d in 363 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75788;product=putative inner membrane protein;protein_id=CAL11389.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1442400	1442468	.	+	.	ID=id2410;Note=10 probable transmembrane helices predicted for YE1297 by TMHMM2.0 at aa 23-45%2C 49-71%2C 92-114%2C 129-151%2C164-186%2C 220-242%2C 249-271%2C 291-313%2C 320-342 and 357-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1442478	1442546	.	+	.	ID=id2410;Note=10 probable transmembrane helices predicted for YE1297 by TMHMM2.0 at aa 23-45%2C 49-71%2C 92-114%2C 129-151%2C164-186%2C 220-242%2C 249-271%2C 291-313%2C 320-342 and 357-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1442607	1442675	.	+	.	ID=id2410;Note=10 probable transmembrane helices predicted for YE1297 by TMHMM2.0 at aa 23-45%2C 49-71%2C 92-114%2C 129-151%2C164-186%2C 220-242%2C 249-271%2C 291-313%2C 320-342 and 357-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1442718	1442786	.	+	.	ID=id2410;Note=10 probable transmembrane helices predicted for YE1297 by TMHMM2.0 at aa 23-45%2C 49-71%2C 92-114%2C 129-151%2C164-186%2C 220-242%2C 249-271%2C 291-313%2C 320-342 and 357-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1442823	1442891	.	+	.	ID=id2410;Note=10 probable transmembrane helices predicted for YE1297 by TMHMM2.0 at aa 23-45%2C 49-71%2C 92-114%2C 129-151%2C164-186%2C 220-242%2C 249-271%2C 291-313%2C 320-342 and 357-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1442991	1443059	.	+	.	ID=id2410;Note=10 probable transmembrane helices predicted for YE1297 by TMHMM2.0 at aa 23-45%2C 49-71%2C 92-114%2C 129-151%2C164-186%2C 220-242%2C 249-271%2C 291-313%2C 320-342 and 357-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1443078	1443146	.	+	.	ID=id2410;Note=10 probable transmembrane helices predicted for YE1297 by TMHMM2.0 at aa 23-45%2C 49-71%2C 92-114%2C 129-151%2C164-186%2C 220-242%2C 249-271%2C 291-313%2C 320-342 and 357-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1443204	1443272	.	+	.	ID=id2410;Note=10 probable transmembrane helices predicted for YE1297 by TMHMM2.0 at aa 23-45%2C 49-71%2C 92-114%2C 129-151%2C164-186%2C 220-242%2C 249-271%2C 291-313%2C 320-342 and 357-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1443291	1443359	.	+	.	ID=id2410;Note=10 probable transmembrane helices predicted for YE1297 by TMHMM2.0 at aa 23-45%2C 49-71%2C 92-114%2C 129-151%2C164-186%2C 220-242%2C 249-271%2C 291-313%2C 320-342 and 357-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1443402	1443461	.	+	.	ID=id2410;Note=10 probable transmembrane helices predicted for YE1297 by TMHMM2.0 at aa 23-45%2C 49-71%2C 92-114%2C 129-151%2C164-186%2C 220-242%2C 249-271%2C 291-313%2C 320-342 and 357-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	1443557	1444594	.	-	.	ID=gene1301;Name=flk;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=YE1298
AM286415.1	EMBL	CDS	1443557	1444594	.	-	0	ID=cds1247;Parent=gene1301;Dbxref=EnsemblGenomes-Gn:YE1298,EnsemblGenomes-Tr:CAL11390,GOA:A1JKU7,InterPro:IPR023597,UniProtKB/TrEMBL:A1JKU7,NCBI_GP:CAL11390.1;Name=CAL11390.1;gbkey=CDS;gene=flk;product=putative flagellar assembly regulatory protein%2CFlk;protein_id=CAL11390.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1443563	1443616	.	-	.	ID=id2411;Note=1 probable transmembrane helix predicted for YE1298 by TMHMM2.0 at aa 327-344;gbkey=misc_feature;gene=flk;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1444897	1445253	.	+	.	ID=gene1302;Name=scsA;gbkey=Gene;gene=scsA;gene_biotype=protein_coding;locus_tag=YE1299
AM286415.1	EMBL	CDS	1444897	1445253	.	+	0	ID=cds1248;Parent=gene1302;Dbxref=EnsemblGenomes-Gn:YE1299,EnsemblGenomes-Tr:CAL11391,UniProtKB/TrEMBL:A1JKV2,NCBI_GP:CAL11391.1;Name=CAL11391.1;Note=Similar to Salmonella typhimurium suppressor for copper-sensitivity A ScsA or Stm1113 SWALL:O33917 (EMBL:U75949) (120 aa) fasta scores: E(): 2.6e-22%2C 57.37 id in 122 aa and to Salmonella typhi membrane protein%2Csuppressor for copper-sensitivity A ScsA or Sty1149 SWALL:Q8Z7P5 (EMBL:AL627269) (120 aa) fasta scores: E(): 2.6e-22%2C 57.37 38d in 122 aa;gbkey=CDS;gene=scsA;inference=similar to sequence:INSDC:U75949;product=putative metal resistance protein;protein_id=CAL11391.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1444915	1444983	.	+	.	ID=id2412;Note=2 probable transmembrane helices predicted for YE1299 by TMHMM2.0 at aa 7-29 and 69-91;gbkey=misc_feature;gene=scsA;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1445101	1445169	.	+	.	ID=id2412;Note=2 probable transmembrane helices predicted for YE1299 by TMHMM2.0 at aa 7-29 and 69-91;gbkey=misc_feature;gene=scsA;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	1445304	1447364	.	+	.	ID=gene1303;Name=scsB;gbkey=Gene;gene=scsB;gene_biotype=protein_coding;locus_tag=YE1300
AM286415.1	EMBL	CDS	1445304	1447364	.	+	0	ID=cds1249;Parent=gene1303;Dbxref=EnsemblGenomes-Gn:YE1300,EnsemblGenomes-Tr:CAL11392,GOA:A1JKW0,InterPro:IPR003834,InterPro:IPR012336,InterPro:IPR017937,InterPro:IPR022910,InterPro:IPR028250,UniProtKB/TrEMBL:A1JKW0,NCBI_GP:CAL11392.1;Name=CAL11392.1;Note=Similar to Salmonella typhimurium suppression of copper sensitivity ScsB or Stm1114 SWALL:Q8ZQ43 (EMBL:AE008748) (628 aa) fasta scores: E(): 1.1e-115%2C55.03 38d in 685 aa and to Salmonella typhi membrane protein%2C suppressor for copper-sensitivity B ScsB or sty1150 SWALL:Q8Z7P4 (EMBL:AL627269) (628 aa) fasta scores: E(): 1.1e-115%2C 55.18 38d in 685 aa%2C and to Xylella fastidiosa c-type cytochrome biogenesis protein xf0620 SWALL:Q9PFN7 (EMBL:AE003907) (758 aa) fasta scores: E(): 7.8e-36%2C 31.03 38d in 435 aa;gbkey=CDS;gene=scsB;inference=similar to sequence:INSDC:AL627269;product=putative metal resistance protein;protein_id=CAL11392.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1446150	1446218	.	+	.	ID=id2413;Note=8 probable transmembrane helices predicted for YE1300 by TMHMM2.0 at aa 283-305%2C 326-348%2C 363-385%2C418-440%2C 445-467%2C 480-502%2C 506-528 and 535-557;gbkey=misc_feature;gene=scsB;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	1446279	1446347	.	+	.	ID=id2413;Note=8 probable transmembrane helices predicted for YE1300 by TMHMM2.0 at aa 283-305%2C 326-348%2C 363-385%2C418-440%2C 445-467%2C 480-502%2C 506-528 and 535-557;gbkey=misc_feature;gene=scsB;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	1446390	1446458	.	+	.	ID=id2413;Note=8 probable transmembrane helices predicted for YE1300 by TMHMM2.0 at aa 283-305%2C 326-348%2C 363-385%2C418-440%2C 445-467%2C 480-502%2C 506-528 and 535-557;gbkey=misc_feature;gene=scsB;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	1446555	1446623	.	+	.	ID=id2413;Note=8 probable transmembrane helices predicted for YE1300 by TMHMM2.0 at aa 283-305%2C 326-348%2C 363-385%2C418-440%2C 445-467%2C 480-502%2C 506-528 and 535-557;gbkey=misc_feature;gene=scsB;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	1446636	1446704	.	+	.	ID=id2413;Note=8 probable transmembrane helices predicted for YE1300 by TMHMM2.0 at aa 283-305%2C 326-348%2C 363-385%2C418-440%2C 445-467%2C 480-502%2C 506-528 and 535-557;gbkey=misc_feature;gene=scsB;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	1446741	1446809	.	+	.	ID=id2413;Note=8 probable transmembrane helices predicted for YE1300 by TMHMM2.0 at aa 283-305%2C 326-348%2C 363-385%2C418-440%2C 445-467%2C 480-502%2C 506-528 and 535-557;gbkey=misc_feature;gene=scsB;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	1446819	1446887	.	+	.	ID=id2413;Note=8 probable transmembrane helices predicted for YE1300 by TMHMM2.0 at aa 283-305%2C 326-348%2C 363-385%2C418-440%2C 445-467%2C 480-502%2C 506-528 and 535-557;gbkey=misc_feature;gene=scsB;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	1446906	1446974	.	+	.	ID=id2413;Note=8 probable transmembrane helices predicted for YE1300 by TMHMM2.0 at aa 283-305%2C 326-348%2C 363-385%2C418-440%2C 445-467%2C 480-502%2C 506-528 and 535-557;gbkey=misc_feature;gene=scsB;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	1446162	1446806	.	+	.	ID=id2414;Note=Pfam match to entry PF02683 DsbD%2C Cytochrome C biogenesis protein transmembrane region%2C score -12.4%2CE-value 1.9e-05;gbkey=misc_feature;gene=scsB;inference=protein motif:PFAM:PF02683
AM286415.1	EMBL	sequence_feature	1447071	1447127	.	+	.	ID=id2415;Note=PS00194 Thioredoxin family active site.;gbkey=misc_feature;gene=scsB;inference=protein motif:Prosite:PS00194
AM286415.1	EMBL	gene	1447361	1448086	.	+	.	ID=gene1304;Name=YE1301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1301
AM286415.1	EMBL	CDS	1447361	1448086	.	+	0	ID=cds1250;Parent=gene1304;Dbxref=EnsemblGenomes-Gn:YE1301,EnsemblGenomes-Tr:CAL11393,InterPro:IPR012336,UniProtKB/TrEMBL:A1JKX4,NCBI_GP:CAL11393.1;Name=CAL11393.1;Note=Similar to Salmonella typhimurium suppressor for copper-sensitivity C precursor ScsC or Stm1115 SWALL:O33919 (EMBL:U75949) (207 aa) fasta scores: E(): 1.9e-38%2C 47.71 38d in 241 aa%2C and to Salmonella typhi secreted protein%2C suppressor for copper-sensitivity ScsC or Sty1151 SWALL:Q8Z7P3 (EMBL:AL627269) (207 aa) fasta scores: E(): 1.9e-38%2C 47.71 38d in 241 aa%2C and to Rickettsia conorii similarity to thiol:disulfide interchange protein dsba rc0597 SWALL:Q92I23 (EMBL:AE008620) (263 aa) fasta scores: E(): 8.2e-17%2C28.97 38d in 214 aa;gbkey=CDS;inference=similar to sequence:INSDC:U75949;product=putative metal resistance protein;protein_id=CAL11393.1;transl_table=11
AM286415.1	EMBL	gene	1448083	1448583	.	+	.	ID=gene1305;Name=YE1302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1302
AM286415.1	EMBL	CDS	1448083	1448583	.	+	0	ID=cds1251;Parent=gene1305;Dbxref=EnsemblGenomes-Gn:YE1302,EnsemblGenomes-Tr:CAL11394,GOA:A1JKX6,InterPro:IPR000866,InterPro:IPR012336,UniProtKB/TrEMBL:A1JKX6,NCBI_GP:CAL11394.1;Name=CAL11394.1;Note=Similar to Salmonella typhimurium suppression of copper sensitivity ScsD or Stm1116 SWALL:Q8ZQ42 (EMBL:AE008748) (168 aa) fasta scores: E(): 2.5e-37%2C56.79 38d in 162 aa%2C and to Salmonella typhimurium suppressor for copper-sensitivity D ScsD SWALL:O33920 (EMBL:U75949) (168 aa) fasta scores: E(): 2.5e-37%2C 56.79 id in 162 aa%2C and to Haemophilus influenzae thioredoxin-like protein Hi1115 hi1115 SWALL:THIX_HAEIN (SWALL:P43787) (167 aa) fasta scores: E(): 1.6e-28%2C 45.12 id in 164 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P43787;product=putative metal resistance protein;protein_id=CAL11394.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1448113	1448166	.	+	.	ID=id2416;Note=1 probable transmembrane helix predicted for YE1302 by TMHMM2.0 at aa 11-28;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1448254	1448307	.	+	.	ID=id2417;Note=Pfam match to entry PF00085 thiored%2C Thioredoxin %2Cscore 14.9%2C E-value 0.00024;gbkey=misc_feature;inference=protein motif:PFAM:PF00085
AM286415.1	EMBL	gene	1448640	1450121	.	-	.	ID=gene1306;Name=YE1303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1303
AM286415.1	EMBL	CDS	1448640	1450121	.	-	0	ID=cds1252;Parent=gene1306;Dbxref=EnsemblGenomes-Gn:YE1303,EnsemblGenomes-Tr:CAL11395,GOA:A1JKY1,InterPro:IPR000524,InterPro:IPR004839,InterPro:IPR011991,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JKY1,NCBI_GP:CAL11395.1;Name=CAL11395.1;Note=Similar to many proteins which displaying both a GntR-family trancriptional regulatory HTH domain and an amino transferase domain a including: Thermoplasma acidophilum aspartate aminotransferase related protein Ta1193 SWALL:Q9HIY3 (EMBL:AL445066) (402 aa) fasta scores: E(): 1.2e-40%2C 33.24 38d in 373 aa%2C Pyrococcus abyssi aminotransferase Pab2227 SWALL:Q9V282 (EMBL:AJ248283) (410 aa) fasta scores: E(): 1.9e-39%2C 33.6 38d in 369 aa and to Anabaena sp. transcriptional regulator Alr4738 SWALL:Q8YN32 (EMBL:AP003597) (490 aa) fasta scores: E(): 6.4e-39%2C 32.16 38d in 485 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003597;product=conserved hypothetical protein;protein_id=CAL11395.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1449456	1449596	.	-	.	ID=id2418;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 19.0%2C E-value 1.9e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	1449870	1450049	.	-	.	ID=id2419;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 73.7%2C E-value 2.5e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	sequence_feature	1449918	1449992	.	-	.	ID=id2420;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00043
AM286415.1	EMBL	gene	1450279	1451322	.	+	.	ID=gene1307;Name=YE1304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1304
AM286415.1	EMBL	CDS	1450279	1451322	.	+	0	ID=cds1253;Parent=gene1307;Dbxref=EnsemblGenomes-Gn:YE1304,EnsemblGenomes-Tr:CAL11396,GOA:A1JKZ5,InterPro:IPR000620,UniProtKB/TrEMBL:A1JKZ5,NCBI_GP:CAL11396.1;Name=CAL11396.1;Note=Similar to many putative membrane proteins including: Methanosarcina acetivorans integral membrane protein Ma3243 SWALL:AAM06614 (EMBL:AE011028) (291 aa) fasta scores: E(): 5.6e-10%2C 27.97 38d in 311 aa and Bacillus halodurans hypothetical protein Bh2747 SWALL:Q9K9A2 (EMBL:AP001516) (302 aa) fasta scores: E(): 4.5e-07%2C 22.71 38d in 295 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP001516;product=putative inner membrane protein;protein_id=CAL11396.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1450360	1450428	.	+	.	ID=id2421;Note=10 probable transmembrane helices predicted for YE1304 by TMHMM2.0 at aa 28-50%2C 60-79%2C 91-113%2C 117-139%2C148-170%2C 174-196%2C 209-231%2C 254-276%2C 283-305 and 309-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1450456	1450515	.	+	.	ID=id2421;Note=10 probable transmembrane helices predicted for YE1304 by TMHMM2.0 at aa 28-50%2C 60-79%2C 91-113%2C 117-139%2C148-170%2C 174-196%2C 209-231%2C 254-276%2C 283-305 and 309-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1450549	1450617	.	+	.	ID=id2421;Note=10 probable transmembrane helices predicted for YE1304 by TMHMM2.0 at aa 28-50%2C 60-79%2C 91-113%2C 117-139%2C148-170%2C 174-196%2C 209-231%2C 254-276%2C 283-305 and 309-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1450627	1450695	.	+	.	ID=id2421;Note=10 probable transmembrane helices predicted for YE1304 by TMHMM2.0 at aa 28-50%2C 60-79%2C 91-113%2C 117-139%2C148-170%2C 174-196%2C 209-231%2C 254-276%2C 283-305 and 309-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1450720	1450788	.	+	.	ID=id2421;Note=10 probable transmembrane helices predicted for YE1304 by TMHMM2.0 at aa 28-50%2C 60-79%2C 91-113%2C 117-139%2C148-170%2C 174-196%2C 209-231%2C 254-276%2C 283-305 and 309-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1450798	1450866	.	+	.	ID=id2421;Note=10 probable transmembrane helices predicted for YE1304 by TMHMM2.0 at aa 28-50%2C 60-79%2C 91-113%2C 117-139%2C148-170%2C 174-196%2C 209-231%2C 254-276%2C 283-305 and 309-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1450903	1450971	.	+	.	ID=id2421;Note=10 probable transmembrane helices predicted for YE1304 by TMHMM2.0 at aa 28-50%2C 60-79%2C 91-113%2C 117-139%2C148-170%2C 174-196%2C 209-231%2C 254-276%2C 283-305 and 309-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1451038	1451106	.	+	.	ID=id2421;Note=10 probable transmembrane helices predicted for YE1304 by TMHMM2.0 at aa 28-50%2C 60-79%2C 91-113%2C 117-139%2C148-170%2C 174-196%2C 209-231%2C 254-276%2C 283-305 and 309-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1451125	1451193	.	+	.	ID=id2421;Note=10 probable transmembrane helices predicted for YE1304 by TMHMM2.0 at aa 28-50%2C 60-79%2C 91-113%2C 117-139%2C148-170%2C 174-196%2C 209-231%2C 254-276%2C 283-305 and 309-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1451203	1451262	.	+	.	ID=id2421;Note=10 probable transmembrane helices predicted for YE1304 by TMHMM2.0 at aa 28-50%2C 60-79%2C 91-113%2C 117-139%2C148-170%2C 174-196%2C 209-231%2C 254-276%2C 283-305 and 309-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	1450387	1450767	.	+	.	ID=id2422;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 68.9%2C E-value 6.9e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	1450831	1451265	.	+	.	ID=id2423;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 51.3%2C E-value 1.4e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	1451329	1452213	.	-	.	ID=gene1308;Name=YE1305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1305
AM286415.1	EMBL	CDS	1451329	1452213	.	-	0	ID=cds1254;Parent=gene1308;Dbxref=EnsemblGenomes-Gn:YE1305,EnsemblGenomes-Tr:CAL11397,GOA:A1JL16,InterPro:IPR000620,UniProtKB/TrEMBL:A1JL16,NCBI_GP:CAL11397.1;Name=CAL11397.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11397.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1451365	1451736	.	-	.	ID=id2424;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 82.2%2C E-value 6.7e-22;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	1452133	1452201	.	-	.	ID=id2425;Note=10 probable transmembrane helices predicted for YE1305 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-80%2C 90-112%2C114-136%2C 151-168%2C 181-200%2C 210-232%2C 237-259 and 263-281;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1452052	1452120	.	-	.	ID=id2425;Note=10 probable transmembrane helices predicted for YE1305 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-80%2C 90-112%2C114-136%2C 151-168%2C 181-200%2C 210-232%2C 237-259 and 263-281;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1451974	1452033	.	-	.	ID=id2425;Note=10 probable transmembrane helices predicted for YE1305 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-80%2C 90-112%2C114-136%2C 151-168%2C 181-200%2C 210-232%2C 237-259 and 263-281;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1451878	1451946	.	-	.	ID=id2425;Note=10 probable transmembrane helices predicted for YE1305 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-80%2C 90-112%2C114-136%2C 151-168%2C 181-200%2C 210-232%2C 237-259 and 263-281;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1451806	1451874	.	-	.	ID=id2425;Note=10 probable transmembrane helices predicted for YE1305 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-80%2C 90-112%2C114-136%2C 151-168%2C 181-200%2C 210-232%2C 237-259 and 263-281;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1451710	1451763	.	-	.	ID=id2425;Note=10 probable transmembrane helices predicted for YE1305 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-80%2C 90-112%2C114-136%2C 151-168%2C 181-200%2C 210-232%2C 237-259 and 263-281;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1451614	1451673	.	-	.	ID=id2425;Note=10 probable transmembrane helices predicted for YE1305 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-80%2C 90-112%2C114-136%2C 151-168%2C 181-200%2C 210-232%2C 237-259 and 263-281;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1451518	1451586	.	-	.	ID=id2425;Note=10 probable transmembrane helices predicted for YE1305 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-80%2C 90-112%2C114-136%2C 151-168%2C 181-200%2C 210-232%2C 237-259 and 263-281;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1451437	1451505	.	-	.	ID=id2425;Note=10 probable transmembrane helices predicted for YE1305 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-80%2C 90-112%2C114-136%2C 151-168%2C 181-200%2C 210-232%2C 237-259 and 263-281;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1451371	1451427	.	-	.	ID=id2425;Note=10 probable transmembrane helices predicted for YE1305 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-80%2C 90-112%2C114-136%2C 151-168%2C 181-200%2C 210-232%2C 237-259 and 263-281;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	1451806	1452183	.	-	.	ID=id2426;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 73.5%2C E-value 2.9e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	1452386	1453171	.	+	.	ID=gene1309;Name=YE1306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1306
AM286415.1	EMBL	CDS	1452386	1453171	.	+	0	ID=cds1255;Parent=gene1309;Dbxref=EnsemblGenomes-Gn:YE1306,EnsemblGenomes-Tr:CAL11398,GOA:A1JL47,InterPro:IPR009057,InterPro:IPR011051,InterPro:IPR013096,InterPro:IPR014710,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR020449,UniProtKB/TrEMBL:A1JL47,NCBI_GP:CAL11398.1;Name=CAL11398.1;gbkey=CDS;product=putative AraC-family regulatory protein;protein_id=CAL11398.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1452866	1453003	.	+	.	ID=id2427;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 17.1%2C E-value 0.027;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	1452902	1452967	.	+	.	ID=id2428;Note=Predicted helix-turn-helix motif with score 1401.000%2C SD 3.96 at aa 173-194%2C sequence TSLAVWAKRVYTTERTLSRRCQ;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1453004	1453135	.	+	.	ID=id2429;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	1453022	1453150	.	+	.	ID=id2430;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 36.6%2C E-value 3.7e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	1453333	1454460	.	+	.	ID=gene1310;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=YE1307
AM286415.1	EMBL	CDS	1453333	1454460	.	+	0	ID=cds1256;Parent=gene1310;Dbxref=EnsemblGenomes-Gn:YE1307,EnsemblGenomes-Tr:CAL11399,GOA:A1JL55,InterPro:IPR006139,InterPro:IPR006140,InterPro:IPR016040,InterPro:IPR020921,InterPro:IPR024531,InterPro:IPR029752,InterPro:IPR029753,NCBI_GP:CAL11399.1;Name=CAL11399.1;gbkey=CDS;gene=pdxB;product=putative D-isomer specific 2-hydroxyacid dehydrogenase;protein_id=CAL11399.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1453339	1453599	.	+	.	ID=id2431;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain %2Cscore 63.2%2C E-value 3.5e-16;gbkey=misc_feature;gene=pdxB;inference=protein motif:PFAM:PF00389
AM286415.1	EMBL	sequence_feature	1453603	1454094	.	+	.	ID=id2432;Note=Pfam match to entry PF02826 2-Hacid_DH_C%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain %2Cscore 189.1%2C E-value 4.7e-54;gbkey=misc_feature;gene=pdxB;inference=protein motif:PFAM:PF02826
AM286415.1	EMBL	sequence_feature	1453687	1453770	.	+	.	ID=id2433;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;gbkey=misc_feature;gene=pdxB;inference=protein motif:Prosite:PS00065
AM286415.1	EMBL	sequence_feature	1453921	1453971	.	+	.	ID=id2434;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;gbkey=misc_feature;gene=pdxB;inference=protein motif:Prosite:PS00671
AM286415.1	EMBL	gene	1454845	1455855	.	+	.	ID=gene1311;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;gene_synonym=usg-1;locus_tag=YE1308
AM286415.1	EMBL	CDS	1454845	1455855	.	+	0	ID=cds1257;Parent=gene1311;Dbxref=EnsemblGenomes-Gn:YE1308,EnsemblGenomes-Tr:CAL11400,GOA:A1JL61,InterPro:IPR000534,InterPro:IPR012080,InterPro:IPR012280,InterPro:IPR016040,UniProtKB/TrEMBL:A1JL61,NCBI_GP:CAL11400.1;Name=CAL11400.1;gbkey=CDS;gene=asd;product=putative aspartate-semialdehyde dehydrogenase;protein_id=CAL11400.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1454854	1455228	.	+	.	ID=id2435;Note=Pfam match to entry PF01118 Semialdhyde_dh%2CSemialdehyde dehydrogenase%2C NAD binding domain%2C score 184.4%2C E-value 1.2e-52;gbkey=misc_feature;gene=asd;inference=protein motif:PFAM:PF01118
AM286415.1	EMBL	sequence_feature	1455253	1455795	.	+	.	ID=id2436;Note=Pfam match to entry PF02774 Semialdhyde_dhC%2CSemialdehyde dehydrogenase%2C dimerisation domain%2C score 152.5%2C E-value 4.8e-43;gbkey=misc_feature;gene=asd;inference=protein motif:PFAM:PF02774
AM286415.1	EMBL	gene	1455855	1456697	.	+	.	ID=gene1312;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=YE1309
AM286415.1	EMBL	CDS	1455855	1456697	.	+	0	ID=cds1258;Parent=gene1312;Dbxref=EnsemblGenomes-Gn:YE1309,EnsemblGenomes-Tr:CAL11401,GOA:A1JL64,InterPro:IPR001406,InterPro:IPR020094,InterPro:IPR020095,InterPro:IPR020097,InterPro:IPR020103,UniProtKB/TrEMBL:A1JL64,NCBI_GP:CAL11401.1;Name=CAL11401.1;Note=Similar to Escherichia coli tRNA pseudouridine synthase a TruA or HisT or asuc or leuk or b2318 SWALL:TRUA_ECOLI (SWALL:P07649) (270 aa) fasta scores: E(): 1.4e-89%2C 79.61 38d in 260 aa%2C and to Yersinia pestis tRNA pseudouridine synthase a TruA or Ypo2766 SWALL:Q8ZD27 (EMBL:AJ414153) (264 aa) fasta scores: E(): 2.4e-107%2C92.74 38d in 262 aa;gbkey=CDS;gene=truA;inference=similar to sequence:UniProtKB:P07649;product=tRNA pseudouridine synthase A;protein_id=CAL11401.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1456071	1456217	.	+	.	ID=id2437;Note=Pfam match to entry PF01416 PseudoU_synth_1%2C tRNA pseudouridine synthase%2C score 52.1%2C E-value 3.1e-16;gbkey=misc_feature;gene=truA;inference=protein motif:PFAM:PF01416
AM286415.1	EMBL	sequence_feature	1456332	1456640	.	+	.	ID=id2438;Note=Pfam match to entry PF01416 PseudoU_synth_1%2C tRNA pseudouridine synthase%2C score 108.1%2C E-value 1.1e-29;gbkey=misc_feature;gene=truA;inference=protein motif:PFAM:PF01416
AM286415.1	EMBL	gene	1456829	1457491	.	+	.	ID=gene1313;Name=dedA;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=YE1310
AM286415.1	EMBL	CDS	1456829	1457491	.	+	0	ID=cds1259;Parent=gene1313;Dbxref=EnsemblGenomes-Gn:YE1310,EnsemblGenomes-Tr:CAL11402,InterPro:IPR015414,UniProtKB/TrEMBL:A1JL73,NCBI_GP:CAL11402.1;Name=CAL11402.1;gbkey=CDS;gene=dedA;product=putative membrane protein;protein_id=CAL11402.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1456907	1456975	.	+	.	ID=id2439;Note=4 probable transmembrane helices predicted for YE1310 by TMHMM2.0 at aa 27-49%2C 69-91%2C 156-178 and 191-208;gbkey=misc_feature;gene=dedA;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1457033	1457101	.	+	.	ID=id2439;Note=4 probable transmembrane helices predicted for YE1310 by TMHMM2.0 at aa 27-49%2C 69-91%2C 156-178 and 191-208;gbkey=misc_feature;gene=dedA;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1457294	1457362	.	+	.	ID=id2439;Note=4 probable transmembrane helices predicted for YE1310 by TMHMM2.0 at aa 27-49%2C 69-91%2C 156-178 and 191-208;gbkey=misc_feature;gene=dedA;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1457399	1457452	.	+	.	ID=id2439;Note=4 probable transmembrane helices predicted for YE1310 by TMHMM2.0 at aa 27-49%2C 69-91%2C 156-178 and 191-208;gbkey=misc_feature;gene=dedA;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	1456919	1457410	.	+	.	ID=id2440;Note=Pfam match to entry PF00597 DedA%2C DedA family %2Cscore 198.4%2C E-value 7.3e-57;gbkey=misc_feature;gene=dedA;inference=protein motif:PFAM:PF00597
AM286415.1	EMBL	gene	1457722	1458633	.	+	.	ID=gene1314;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;gene_synonym=dedB,usg;locus_tag=YE1311
AM286415.1	EMBL	CDS	1457722	1458633	.	+	0	ID=cds1260;Parent=gene1314;Dbxref=EnsemblGenomes-Gn:YE1311,EnsemblGenomes-Tr:CAL11403,GOA:A1JL77,InterPro:IPR000022,InterPro:IPR000438,InterPro:IPR011762,InterPro:IPR029045,NCBI_GP:CAL11403.1;Name=CAL11403.1;gbkey=CDS;gene=accD;product=acetyl-coenzyme A carboxylase carboxyl transferase subunit beta;protein_id=CAL11403.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1458043	1458429	.	+	.	ID=id2441;Note=Pfam match to entry PF01039 Carboxyl_trans%2CCarboxyl transferase domain%2C score 40.9%2C E-value 1.4e-11;gbkey=misc_feature;gene=accD;inference=protein motif:PFAM:PF01039
AM286415.1	EMBL	gene	1459015	1460283	.	+	.	ID=gene1315;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;gene_synonym=dedC;locus_tag=YE1312
AM286415.1	EMBL	CDS	1459015	1460283	.	+	0	ID=cds1261;Parent=gene1315;Dbxref=EnsemblGenomes-Gn:YE1312,EnsemblGenomes-Tr:CAL11404,GOA:A1JL78,InterPro:IPR001645,InterPro:IPR004101,InterPro:IPR013221,InterPro:IPR018109,UniProtKB/TrEMBL:A1JL78,NCBI_GP:CAL11404.1;Name=CAL11404.1;gbkey=CDS;gene=folC;product=putative FolC bifunctional protein;protein_id=CAL11404.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1459168	1459239	.	+	.	ID=id2442;Note=PS01011 Folylpolyglutamate synthase signature 1.;gbkey=misc_feature;gene=folC;inference=protein motif:Prosite:PS01011
AM286415.1	EMBL	sequence_feature	1459378	1459590	.	+	.	ID=id2443;Note=Pfam match to entry PF01225 Mur_ligase%2C Mur ligase family%2C catalytic domain%2C score 35.8%2C E-value 1.2e-10;gbkey=misc_feature;gene=folC;inference=protein motif:PFAM:PF01225
AM286415.1	EMBL	sequence_feature	1459444	1459491	.	+	.	ID=id2444;Note=PS01012 Folylpolyglutamate synthase signature 2.;gbkey=misc_feature;gene=folC;inference=protein motif:Prosite:PS01012
AM286415.1	EMBL	sequence_feature	1459888	1460148	.	+	.	ID=id2445;Note=Pfam match to entry PF02875 Mur_ligase_C%2C Mur ligase family%2C glutamate ligase domain%2C score 21.8%2CE-value 0.00012;gbkey=misc_feature;gene=folC;inference=protein motif:PFAM:PF02875
AM286415.1	EMBL	gene	1460323	1461042	.	+	.	ID=gene1316;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=YE1313
AM286415.1	EMBL	CDS	1460323	1461042	.	+	0	ID=cds1262;Parent=gene1316;Dbxref=EnsemblGenomes-Gn:YE1313,EnsemblGenomes-Tr:CAL11405,InterPro:IPR007730,UniProtKB/TrEMBL:A1JL80,NCBI_GP:CAL11405.1;Name=CAL11405.1;gbkey=CDS;gene=dedD;product=putative membrane protein;protein_id=CAL11405.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1460341	1460409	.	+	.	ID=id2446;Note=1 probable transmembrane helix predicted for YE1313 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=dedD;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1461233	1461742	.	+	.	ID=gene1317;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;gene_synonym=dedE;locus_tag=YE1314
AM286415.1	EMBL	CDS	1461233	1461742	.	+	0	ID=cds1263;Parent=gene1317;Dbxref=EnsemblGenomes-Gn:YE1314,EnsemblGenomes-Tr:CAL11406,GOA:A1JL82,InterPro:IPR003825,UniProtKB/TrEMBL:A1JL82,NCBI_GP:CAL11406.1;Name=CAL11406.1;gbkey=CDS;gene=cvpA;product=putative colicin V production protein;protein_id=CAL11406.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1461239	1461694	.	+	.	ID=id2447;Note=Pfam match to entry PF02674 Colicin_V%2C Colicin V production protein%2C score 204.1%2C E-value 1.4e-58;gbkey=misc_feature;gene=cvpA;inference=protein motif:PFAM:PF02674
AM286415.1	EMBL	sequence_feature	1461242	1461310	.	+	.	ID=id2448;Note=4 probable transmembrane helices predicted for YE1314 by TMHMM2.0 at aa 4-26%2C 31-53%2C 63-85 and 98-120;gbkey=misc_feature;gene=cvpA;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1461323	1461391	.	+	.	ID=id2448;Note=4 probable transmembrane helices predicted for YE1314 by TMHMM2.0 at aa 4-26%2C 31-53%2C 63-85 and 98-120;gbkey=misc_feature;gene=cvpA;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1461419	1461487	.	+	.	ID=id2448;Note=4 probable transmembrane helices predicted for YE1314 by TMHMM2.0 at aa 4-26%2C 31-53%2C 63-85 and 98-120;gbkey=misc_feature;gene=cvpA;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1461524	1461592	.	+	.	ID=id2448;Note=4 probable transmembrane helices predicted for YE1314 by TMHMM2.0 at aa 4-26%2C 31-53%2C 63-85 and 98-120;gbkey=misc_feature;gene=cvpA;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1461755	1463272	.	+	.	ID=gene1318;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=YE1315
AM286415.1	EMBL	CDS	1461755	1463272	.	+	0	ID=cds1264;Parent=gene1318;Dbxref=EnsemblGenomes-Gn:YE1315,EnsemblGenomes-Tr:CAL11407,GOA:A1JL84,InterPro:IPR000583,InterPro:IPR000836,InterPro:IPR005854,InterPro:IPR017932,InterPro:IPR029055,InterPro:IPR029057,UniProtKB/TrEMBL:A1JL84,NCBI_GP:CAL11407.1;Name=CAL11407.1;gbkey=CDS;gene=purF;product=amidophosphoribosyltransferase;protein_id=CAL11407.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1461755	1461772	.	+	.	ID=id2449;Note=PS00443 Glutamine amidotransferases class-II active site.;gbkey=misc_feature;gene=purF;inference=protein motif:Prosite:PS00443
AM286415.1	EMBL	sequence_feature	1461758	1462336	.	+	.	ID=id2450;Note=Pfam match to entry PF00310 GATase_2%2C Glutamine amidotransferases class-II%2C score 343.9%2C E-value 1.1e-100;gbkey=misc_feature;gene=purF;inference=protein motif:PFAM:PF00310
AM286415.1	EMBL	sequence_feature	1462544	1463014	.	+	.	ID=id2451;Note=Pfam match to entry PF00156 Pribosyltran%2CPhosphoribosyl transferase domain%2C score 51.1%2C E-value 1.6e-12;gbkey=misc_feature;gene=purF;inference=protein motif:PFAM:PF00156
AM286415.1	EMBL	sequence_feature	1462841	1462879	.	+	.	ID=id2452;Note=PS00103 Purine/pyrimidine phosphoribosyl transferases signature.;gbkey=misc_feature;gene=purF;inference=protein motif:Prosite:PS00103
AM286415.1	EMBL	gene	1463680	1464252	.	+	.	ID=gene1319;Name=ubiX;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=YE1317
AM286415.1	EMBL	CDS	1463680	1464252	.	+	0	ID=cds1265;Parent=gene1319;Dbxref=EnsemblGenomes-Gn:YE1317,EnsemblGenomes-Tr:CAL11408,GOA:A1JL90,InterPro:IPR003382,InterPro:IPR004507,UniProtKB/TrEMBL:A1JL90,NCBI_GP:CAL11408.1;Name=CAL11408.1;gbkey=CDS;gene=ubiX;product=probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=CAL11408.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1463683	1464048	.	+	.	ID=id2453;Note=Pfam match to entry PF02441 Flavoprotein%2CFlavoprotein%2C score 170.8%2C E-value 1.5e-48;gbkey=misc_feature;gene=ubiX;inference=protein motif:PFAM:PF02441
AM286415.1	EMBL	gene	1464561	1465343	.	+	.	ID=gene1320;Name=hisJ;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=YE1318
AM286415.1	EMBL	CDS	1464561	1465343	.	+	0	ID=cds1266;Parent=gene1320;Dbxref=EnsemblGenomes-Gn:YE1318,EnsemblGenomes-Tr:CAL11409,GOA:A1JL93,InterPro:IPR001638,InterPro:IPR005768,InterPro:IPR018313,UniProtKB/TrEMBL:A1JL93,NCBI_GP:CAL11409.1;Name=CAL11409.1;gbkey=CDS;gene=hisJ;product=histidine-binding periplasmic protein;protein_id=CAL11409.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1464573	1464632	.	+	.	ID=id2454;Note=1 probable transmembrane helix predicted for YE1318 by TMHMM2.0 at aa 5-24;gbkey=misc_feature;gene=hisJ;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1464642	1465325	.	+	.	ID=id2455;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 285.1%2C E-value 5.6e-83;gbkey=misc_feature;gene=hisJ;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	sequence_feature	1464708	1464749	.	+	.	ID=id2456;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;gbkey=misc_feature;gene=hisJ;inference=protein motif:Prosite:PS01039
AM286415.1	EMBL	gene	1465448	1466134	.	+	.	ID=gene1321;Name=hisQ;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=YE1319
AM286415.1	EMBL	CDS	1465448	1466134	.	+	0	ID=cds1267;Parent=gene1321;Dbxref=EnsemblGenomes-Gn:YE1319,EnsemblGenomes-Tr:CAL11410,GOA:A1JL95,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JL95,NCBI_GP:CAL11410.1;Name=CAL11410.1;gbkey=CDS;gene=hisQ;product=histidine transport system permease protein HisQ;protein_id=CAL11410.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1465490	1465558	.	+	.	ID=id2457;Note=5 probable transmembrane helices predicted for YE1319 by TMHMM2.0 at aa 15-37%2C 58-80%2C 90-108%2C 149-171 and 191-213;gbkey=misc_feature;gene=hisQ;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	1465619	1465687	.	+	.	ID=id2457;Note=5 probable transmembrane helices predicted for YE1319 by TMHMM2.0 at aa 15-37%2C 58-80%2C 90-108%2C 149-171 and 191-213;gbkey=misc_feature;gene=hisQ;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	1465715	1465771	.	+	.	ID=id2457;Note=5 probable transmembrane helices predicted for YE1319 by TMHMM2.0 at aa 15-37%2C 58-80%2C 90-108%2C 149-171 and 191-213;gbkey=misc_feature;gene=hisQ;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	1465892	1465960	.	+	.	ID=id2457;Note=5 probable transmembrane helices predicted for YE1319 by TMHMM2.0 at aa 15-37%2C 58-80%2C 90-108%2C 149-171 and 191-213;gbkey=misc_feature;gene=hisQ;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	1466018	1466086	.	+	.	ID=id2457;Note=5 probable transmembrane helices predicted for YE1319 by TMHMM2.0 at aa 15-37%2C 58-80%2C 90-108%2C 149-171 and 191-213;gbkey=misc_feature;gene=hisQ;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	1465790	1466011	.	+	.	ID=id2458;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 67.6%2C E-value 1.7e-17;gbkey=misc_feature;gene=hisQ;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	1465793	1465879	.	+	.	ID=id2459;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=hisQ;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	sequence_feature	1465808	1465873	.	+	.	ID=id2460;Note=Predicted helix-turn-helix motif with score 1350.000%2C SD 3.78 at aa 121-142%2C sequence TGQIEAARAFGFSSSQIFRRIM;gbkey=misc_feature;gene=hisQ
AM286415.1	EMBL	gene	1466131	1466847	.	+	.	ID=gene1322;Name=hisM;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=YE1320
AM286415.1	EMBL	CDS	1466131	1466847	.	+	0	ID=cds1268;Parent=gene1322;Dbxref=EnsemblGenomes-Gn:YE1320,EnsemblGenomes-Tr:CAL11411,GOA:A1JL99,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JL99,NCBI_GP:CAL11411.1;Name=CAL11411.1;gbkey=CDS;gene=hisM;product=histidine transport system permease protein HisM;protein_id=CAL11411.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1466200	1466268	.	+	.	ID=id2461;Note=5 probable transmembrane helices predicted for YE1320 by TMHMM2.0 at aa 24-46%2C 59-81%2C 96-118%2C 167-189 and 199-221;gbkey=misc_feature;gene=hisM;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	1466305	1466373	.	+	.	ID=id2461;Note=5 probable transmembrane helices predicted for YE1320 by TMHMM2.0 at aa 24-46%2C 59-81%2C 96-118%2C 167-189 and 199-221;gbkey=misc_feature;gene=hisM;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	1466416	1466484	.	+	.	ID=id2461;Note=5 probable transmembrane helices predicted for YE1320 by TMHMM2.0 at aa 24-46%2C 59-81%2C 96-118%2C 167-189 and 199-221;gbkey=misc_feature;gene=hisM;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	1466629	1466697	.	+	.	ID=id2461;Note=5 probable transmembrane helices predicted for YE1320 by TMHMM2.0 at aa 24-46%2C 59-81%2C 96-118%2C 167-189 and 199-221;gbkey=misc_feature;gene=hisM;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	1466725	1466793	.	+	.	ID=id2461;Note=5 probable transmembrane helices predicted for YE1320 by TMHMM2.0 at aa 24-46%2C 59-81%2C 96-118%2C 167-189 and 199-221;gbkey=misc_feature;gene=hisM;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	1466500	1466721	.	+	.	ID=id2462;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 42.6%2C E-value 6e-10;gbkey=misc_feature;gene=hisM;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	1466503	1466589	.	+	.	ID=id2463;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=hisM;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	1466883	1467680	.	+	.	ID=gene1323;Name=hisP;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=YE1321
AM286415.1	EMBL	CDS	1466883	1467680	.	+	0	ID=cds1269;Parent=gene1323;Dbxref=EnsemblGenomes-Gn:YE1321,EnsemblGenomes-Tr:CAL11412,GOA:A1JLA5,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JLA5,NCBI_GP:CAL11412.1;Name=CAL11412.1;gbkey=CDS;gene=hisP;product=histidine transport ATP-binding protein HisP;protein_id=CAL11412.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1466997	1467590	.	+	.	ID=id2464;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 226.9%2C E-value 2e-65;gbkey=misc_feature;gene=hisP;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1467018	1467041	.	+	.	ID=id2465;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=hisP;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1467363	1467407	.	+	.	ID=id2466;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=hisP;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	1467937	1474269	.	+	.	ID=gene1324;Name=YE1322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1322
AM286415.1	EMBL	CDS	1467937	1474269	.	+	0	ID=cds1270;Parent=gene1324;Dbxref=EnsemblGenomes-Gn:YE1322,EnsemblGenomes-Tr:CAL11413,InterPro:IPR011049,InterPro:IPR018511,UniProtKB/TrEMBL:A1JLA7,NCBI_GP:CAL11413.1;Name=CAL11413.1;Note=Similar to many RTX-family toxins including: Yersinia pestis putative virulence determinant Ypo0947 SWALL:Q8ZHF2 (EMBL:AJ414145) (3110 aa) fasta scores: E(): 7e-25%2C 21.71 38d in 1630 aa%2C Actinobacillus actinomycetemcomitans leukotoxin LktA or ltA SWALL:LKTA_ACTAC (SWALL:P16462) (1050 aa) fasta scores: E(): 9.7e-11%2C 25.24 38d in 519 aa and Pasteurella haemolytica leukotoxin from serotype a11 LktA SWALL:LKAB_PASHA (SWALL:P55118) (953 aa) fasta scores: E(): 1.1e-09%2C 23.86 38d in 746 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P55118;product=putative RTX-family protein;protein_id=CAL11413.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1468063	1468098	.	+	.	ID=id2467;Note=PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00139
AM286415.1	EMBL	sequence_feature	1472530	1472583	.	+	.	ID=id2468;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 8.3%2C E-value 1.7;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	1473676	1473726	.	+	.	ID=id2469;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 5.1%2C E-value 4.3;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	1473727	1473780	.	+	.	ID=id2470;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 14.7%2C E-value 0.14;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	1473772	1473828	.	+	.	ID=id2471;Note=PS00330 Hemolysin-type calcium-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00330
AM286415.1	EMBL	sequence_feature	1473781	1473834	.	+	.	ID=id2472;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 26.6%2C E-value 3.8e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	1473835	1473888	.	+	.	ID=id2473;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 6.5%2C E-value 2.9;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	gene	1474340	1475248	.	-	.	ID=gene1325;Name=YE1323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1323
AM286415.1	EMBL	CDS	1474340	1475248	.	-	0	ID=cds1271;Parent=gene1325;Dbxref=EnsemblGenomes-Gn:YE1323,EnsemblGenomes-Tr:CAL11414,GOA:A1JLB2,InterPro:IPR001509,InterPro:IPR010099,InterPro:IPR013549,InterPro:IPR016040,UniProtKB/TrEMBL:A1JLB2,NCBI_GP:CAL11414.1;Name=CAL11414.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11414.1;transl_table=11
AM286415.1	EMBL	gene	1475876	1476574	.	+	.	ID=gene1326;Name=YE1324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1324
AM286415.1	EMBL	CDS	1475876	1476574	.	+	0	ID=cds1272;Parent=gene1326;Dbxref=EnsemblGenomes-Gn:YE1324,EnsemblGenomes-Tr:CAL11415,InterPro:IPR001633,UniProtKB/TrEMBL:A1JLB4,NCBI_GP:CAL11415.1;Name=CAL11415.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11415.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1475882	1476550	.	+	.	ID=id2474;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score -56.7%2C E-value 4.1e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	gene	1476888	1477349	.	+	.	ID=gene1327;Name=YE1325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1325
AM286415.1	EMBL	CDS	1476888	1477349	.	+	0	ID=cds1273;Parent=gene1327;Dbxref=EnsemblGenomes-Gn:YE1325,EnsemblGenomes-Tr:CAL11416,InterPro:IPR000979,InterPro:IPR020935,InterPro:IPR024654,InterPro:IPR029052,UniProtKB/TrEMBL:A1JLB5,NCBI_GP:CAL11416.1;Name=CAL11416.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11416.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1476894	1477184	.	+	.	ID=id2475;Note=Pfam match to entry PF00149 Metallophos%2CCalcineurin-like phosphoesterase%2C score 29.7%2C E-value 7.9e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00149
AM286415.1	EMBL	sequence_feature	1477152	1477226	.	+	.	ID=id2476;Note=PS01269 Uncharacterized protein family UPF0025 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01269
AM286415.1	EMBL	gene	1477421	1477969	.	+	.	ID=gene1328;Name=YE1326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1326
AM286415.1	EMBL	CDS	1477421	1477969	.	+	0	ID=cds1274;Parent=gene1328;Dbxref=EnsemblGenomes-Gn:YE1326,EnsemblGenomes-Tr:CAL11417,GOA:A1JLB6,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR024195,UniProtKB/TrEMBL:A1JLB6,NCBI_GP:CAL11417.1;Name=CAL11417.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11417.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1477529	1477924	.	+	.	ID=id2477;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 86.9%2C E-value 2.7e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	repeat_region	1477994	1478687	.	-	.	ID=id2478;Note=IS1541;gbkey=repeat_region
AM286415.1	EMBL	gene	1478092	1478550	.	-	.	ID=gene1329;Name=YE1327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1327
AM286415.1	EMBL	CDS	1478092	1478550	.	-	0	ID=cds1275;Parent=gene1329;Dbxref=EnsemblGenomes-Gn:YE1327,EnsemblGenomes-Tr:CCP19176,GOA:K8FC61,InterPro:IPR002686,UniProtKB/TrEMBL:K8FC61,NCBI_GP:CCP19176.1;Name=CCP19176.1;gbkey=CDS;product=transposase for the IS1541 insertion element;protein_id=CCP19176.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1478185	1478496	.	-	.	ID=id2479;Note=Pfam match to entry PF01797 Transposase_17%2CTransposase IS200 like%2C score 230.2%2C E-value 1.9e-66;gbkey=misc_feature;inference=protein motif:PFAM:PF01797
AM286415.1	EMBL	gene	1478953	1480209	.	-	.	ID=gene1330;Name=YE1328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1328
AM286415.1	EMBL	CDS	1478953	1480209	.	-	0	ID=cds1276;Parent=gene1330;Dbxref=EnsemblGenomes-Gn:YE1328,EnsemblGenomes-Tr:CAL11418,GOA:A1JLB9,InterPro:IPR004703,UniProtKB/TrEMBL:A1JLB9,NCBI_GP:CAL11418.1;Name=CAL11418.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11418.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1480126	1480194	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1480021	1480089	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1479847	1479915	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1479715	1479810	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1479604	1479672	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1479475	1479543	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1479388	1479447	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1479202	1479270	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1479124	1479192	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1479037	1479105	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1478959	1479027	.	-	.	ID=id2480;Note=11 probable transmembrane helices predicted for YE1328 by TMHMM2.0 at aa 6-28%2C 41-63%2C 99-121%2C 134-165%2C180-202%2C 223-245%2C 255-274%2C 314-336%2C 340-362%2C 369-391 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	1480222	1480509	.	-	.	ID=gene1331;Name=YE1329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1329
AM286415.1	EMBL	CDS	1480222	1480509	.	-	0	ID=cds1277;Parent=gene1331;Dbxref=EnsemblGenomes-Gn:YE1329,EnsemblGenomes-Tr:CAL11419,GOA:A1JLC4,InterPro:IPR003501,InterPro:IPR013011,UniProtKB/TrEMBL:A1JLC4,NCBI_GP:CAL11419.1;Name=CAL11419.1;gbkey=CDS;product=phosphotransferase enzyme II%2C B component;protein_id=CAL11419.1;transl_table=11
AM286415.1	EMBL	gene	1480552	1480995	.	-	.	ID=gene1332;Name=YE1330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1330
AM286415.1	EMBL	CDS	1480552	1480995	.	-	0	ID=cds1278;Parent=gene1332;Dbxref=EnsemblGenomes-Gn:YE1330,EnsemblGenomes-Tr:CAL11420,GOA:A1JLC5,InterPro:IPR002178,InterPro:IPR016152,UniProtKB/TrEMBL:A1JLC5,NCBI_GP:CAL11420.1;Name=CAL11420.1;gbkey=CDS;product=phosphotransferase enzyme II%2C A component;protein_id=CAL11420.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1480555	1480986	.	-	.	ID=id2481;Note=Pfam match to entry PF00359 PTS_EIIA_2%2CPhosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2%2C score 146.9%2C E-value 2.4e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF00359
AM286415.1	EMBL	gene	1481241	1482266	.	+	.	ID=gene1333;Name=YE1331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1331
AM286415.1	EMBL	CDS	1481241	1482266	.	+	0	ID=cds1279;Parent=gene1333;Dbxref=EnsemblGenomes-Gn:YE1331,EnsemblGenomes-Tr:CAL11421,GOA:A1JLC6,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JLC6,NCBI_GP:CAL11421.1;Name=CAL11421.1;gbkey=CDS;product=LacI-family transcriptional regulatory protein;protein_id=CAL11421.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1481271	1481354	.	+	.	ID=id2482;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 34.0%2C E-value 2.3e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	1481277	1481342	.	+	.	ID=id2483;Note=Predicted helix-turn-helix motif with score 1670.000%2C SD 4.87 at aa 13-34%2C sequence VTLSDVANYAGVGSMTVSRALR;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1481283	1481339	.	+	.	ID=id2484;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	sequence_feature	1481448	1482251	.	+	.	ID=id2485;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 18.1%2C E-value 1.1e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	transcript	1482285	1482585	.	-	.	ID=rna66;Note=ryfA RNA (RF00126) as predicted by Rfam%2C score 31.45%2C positions 1 to 305;gbkey=misc_RNA
AM286415.1	EMBL	exon	1482285	1482585	.	-	.	ID=id2486;Parent=rna66;Note=ryfA RNA (RF00126) as predicted by Rfam%2C score 31.45%2C positions 1 to 305;gbkey=misc_RNA
AM286415.1	EMBL	gene	1482848	1485001	.	-	.	ID=gene1334;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=YE1333
AM286415.1	EMBL	CDS	1482848	1485001	.	-	0	ID=cds1280;Parent=gene1334;Dbxref=EnsemblGenomes-Gn:YE1333,EnsemblGenomes-Tr:CAL11422,GOA:A1JLD1,InterPro:IPR002505,InterPro:IPR004614,InterPro:IPR010766,InterPro:IPR016475,InterPro:IPR027417,InterPro:IPR028979,UniProtKB/TrEMBL:A1JLD1,NCBI_GP:CAL11422.1;Name=CAL11422.1;gbkey=CDS;gene=pta;product=phosphate acetyltransferase;protein_id=CAL11422.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1482884	1483834	.	-	.	ID=id2487;Note=Pfam match to entry PF01515 PTA_PTB%2C Phosphate acetyl/butaryl transferase%2C score 638.3%2C E-value 2.8e-189;gbkey=misc_feature;gene=pta;inference=protein motif:PFAM:PF01515
AM286415.1	EMBL	gene	1485159	1486361	.	-	.	ID=gene1335;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;gene_synonym=ack;locus_tag=YE1334
AM286415.1	EMBL	CDS	1485159	1486361	.	-	0	ID=cds1281;Parent=gene1335;Dbxref=EnsemblGenomes-Gn:YE1334,EnsemblGenomes-Tr:CAL11423,GOA:A1JLD2,InterPro:IPR000890,InterPro:IPR004372,InterPro:IPR023865,UniProtKB/TrEMBL:A1JLD2,NCBI_GP:CAL11423.1;Name=CAL11423.1;gbkey=CDS;gene=ackA;product=acetate kinase;protein_id=CAL11423.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1485183	1486349	.	-	.	ID=id2488;Note=Pfam match to entry PF00871 Acetate_kinase%2CAcetokinase family%2C score 831.6%2C E-value 1.8e-247;gbkey=misc_feature;gene=ackA;inference=protein motif:PFAM:PF00871
AM286415.1	EMBL	sequence_feature	1485549	1485614	.	-	.	ID=id2489;Note=Predicted helix-turn-helix motif with score 1001.000%2C SD 2.60 at aa 250-271%2C sequence AIIFHLYDAMGMTMEQISKLLT;gbkey=misc_feature;gene=ackA
AM286415.1	EMBL	sequence_feature	1485693	1485746	.	-	.	ID=id2490;Note=PS01076 Acetate and butyrate kinases family signature 2.;gbkey=misc_feature;gene=ackA;inference=protein motif:Prosite:PS01076
AM286415.1	EMBL	sequence_feature	1486311	1486346	.	-	.	ID=id2491;Note=PS01075 Acetate and butyrate kinases family signature 1.;gbkey=misc_feature;gene=ackA;inference=protein motif:Prosite:PS01075
AM286415.1	EMBL	gene	1486794	1487249	.	+	.	ID=gene1336;Name=YE1335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1335
AM286415.1	EMBL	CDS	1486794	1487249	.	+	0	ID=cds1282;Parent=gene1336;Dbxref=EnsemblGenomes-Gn:YE1335,EnsemblGenomes-Tr:CAL11424,GOA:A1JLD6,InterPro:IPR007334,NCBI_GP:CAL11424.1;Name=CAL11424.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11424.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1486929	1486988	.	+	.	ID=id2492;Note=2 probable transmembrane helices predicted for YE1335 by TMHMM2.0 at aa 46-65 and 69-91;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1486998	1487066	.	+	.	ID=id2492;Note=2 probable transmembrane helices predicted for YE1335 by TMHMM2.0 at aa 46-65 and 69-91;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	1487001	1487033	.	+	.	ID=id2493;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1487418	1487912	.	+	.	ID=gene1337;Name=YE1336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1336
AM286415.1	EMBL	CDS	1487418	1487912	.	+	0	ID=cds1283;Parent=gene1337;Dbxref=EnsemblGenomes-Gn:YE1336,EnsemblGenomes-Tr:CAL11425,InterPro:IPR005587,InterPro:IPR023145,InterPro:IPR023146,NCBI_GP:CAL11425.1;Name=CAL11425.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11425.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1487418	1487909	.	+	.	ID=id2494;Note=Pfam match to entry PF03887 YfbU%2C YfbU domain %2Cscore 345.9%2C E-value 2.9e-101;gbkey=misc_feature;inference=protein motif:PFAM:PF03887
AM286415.1	EMBL	gene	1487953	1488615	.	+	.	ID=gene1338;Name=YE1337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1337
AM286415.1	EMBL	CDS	1487953	1488615	.	+	0	ID=cds1284;Parent=gene1338;Dbxref=EnsemblGenomes-Gn:YE1337,EnsemblGenomes-Tr:CAL11426,GOA:A1JLE0,InterPro:IPR006439,InterPro:IPR023198,InterPro:IPR023214,UniProtKB/TrEMBL:A1JLE0,NCBI_GP:CAL11426.1;Name=CAL11426.1;gbkey=CDS;product=putative haloacid dehalogenase-like hydrolase;protein_id=CAL11426.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1487965	1488510	.	+	.	ID=id2495;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 131.4%2C E-value 1.1e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	1488454	1488486	.	+	.	ID=id2496;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1488851	1489648	.	-	.	ID=gene1339;Name=YE1338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1338
AM286415.1	EMBL	CDS	1488851	1489648	.	-	0	ID=cds1285;Parent=gene1339;Dbxref=EnsemblGenomes-Gn:YE1338,EnsemblGenomes-Tr:CAL11427,UniProtKB/TrEMBL:A1JLE3,NCBI_GP:CAL11427.1;Name=CAL11427.1;Note=no significant database hits;gbkey=CDS;product=putative exported protein;protein_id=CAL11427.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1489451	1489519	.	-	.	ID=id2497;Note=4 probable transmembrane helices predicted for YE1338 by TMHMM2.0 at aa 7-29%2C 44-66%2C 182-201 and 211-228;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1489046	1489105	.	-	.	ID=id2497;Note=4 probable transmembrane helices predicted for YE1338 by TMHMM2.0 at aa 7-29%2C 44-66%2C 182-201 and 211-228;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1488965	1489018	.	-	.	ID=id2497;Note=4 probable transmembrane helices predicted for YE1338 by TMHMM2.0 at aa 7-29%2C 44-66%2C 182-201 and 211-228;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	1489966	1491849	.	+	.	ID=gene1340;Name=YE1339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1339
AM286415.1	EMBL	CDS	1489966	1491849	.	+	0	ID=cds1286;Parent=gene1340;Dbxref=EnsemblGenomes-Gn:YE1339,EnsemblGenomes-Tr:CAL11428,GOA:A1JLE6,InterPro:IPR001898,InterPro:IPR004680,InterPro:IPR006037,UniProtKB/TrEMBL:A1JLE6,NCBI_GP:CAL11428.1;Name=CAL11428.1;gbkey=CDS;product=putative ion transport protein;protein_id=CAL11428.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1490008	1490076	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1490095	1490154	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1490182	1490241	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1490302	1490370	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1490428	1490496	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1490530	1490598	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1491301	1491369	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1491406	1491462	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1491520	1491588	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1491646	1491714	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1491772	1491840	.	+	.	ID=id2498;Note=11 probable transmembrane helices predicted for YE1339 by TMHMM2.0 at aa 15-37%2C 44-63%2C 73-92%2C 113-135%2C155-177%2C 189-211%2C 446-468%2C 481-499%2C 519-541%2C 561-583 and 603-625;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	1490659	1490934	.	+	.	ID=id2499;Note=Pfam match to entry PF02080 TrkA-C%2C TrkA-C domain %2Cscore 53.1%2C E-value 4e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF02080
AM286415.1	EMBL	sequence_feature	1490941	1491216	.	+	.	ID=id2500;Note=Pfam match to entry PF02080 TrkA-C%2C TrkA-C domain %2Cscore 70.8%2C E-value 1.8e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF02080
AM286415.1	EMBL	sequence_feature	1491085	1491108	.	+	.	ID=id2501;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1491325	1491357	.	+	.	ID=id2502;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1491688	1491738	.	+	.	ID=id2503;Note=PS01271 Sodium:sulfate symporter family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01271
AM286415.1	EMBL	gene	1492019	1492612	.	-	.	ID=gene1341;Name=YE1340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1340
AM286415.1	EMBL	CDS	1492019	1492612	.	-	0	ID=cds1287;Parent=gene1341;Dbxref=EnsemblGenomes-Gn:YE1340,EnsemblGenomes-Tr:CAL11429,GOA:A1JLF1,InterPro:IPR003607,InterPro:IPR006674,InterPro:IPR022971,NCBI_GP:CAL11429.1;Name=CAL11429.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11429.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1492193	1492531	.	-	.	ID=id2504;Note=Pfam match to entry PF01966 HD%2C HD domain%2C score 43.2%2C E-value 3.9e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF01966
AM286415.1	EMBL	gene	1493279	1494493	.	-	.	ID=gene1342;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=YE1341
AM286415.1	EMBL	CDS	1493279	1494493	.	-	0	ID=cds1288;Parent=gene1342;Dbxref=EnsemblGenomes-Gn:YE1341,EnsemblGenomes-Tr:CAL11430,GOA:A1JLF3,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JLF3,NCBI_GP:CAL11430.1;Name=CAL11430.1;gbkey=CDS;gene=aat;product=probable aminotransferase;protein_id=CAL11430.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1493297	1494241	.	-	.	ID=id2505;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 117.7%2C E-value 1.4e-32;gbkey=misc_feature;gene=aat;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	gene	1495357	1496289	.	+	.	ID=gene1343;Name=pecT;gbkey=Gene;gene=pecT;gene_biotype=protein_coding;gene_synonym=hexA;locus_tag=YE1343
AM286415.1	EMBL	CDS	1495357	1496289	.	+	0	ID=cds1289;Parent=gene1343;Dbxref=EnsemblGenomes-Gn:YE1343,EnsemblGenomes-Tr:CAL11431,GOA:A1JLF5,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JLF5,NCBI_GP:CAL11431.1;Name=CAL11431.1;gbkey=CDS;gene=pecT;product=LysR-family transcriptional regulatory protein;protein_id=CAL11431.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1495393	1495572	.	+	.	ID=id2506;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 87.3%2C E-value 2.1e-23;gbkey=misc_feature;gene=pecT;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	1495432	1495497	.	+	.	ID=id2507;Note=Predicted helix-turn-helix motif with score 1281.000%2C SD 3.55 at aa 26-47%2C sequence NTFASAAAAVCRTQSAVSQQMQ;gbkey=misc_feature;gene=pecT
AM286415.1	EMBL	sequence_feature	1495435	1495527	.	+	.	ID=id2508;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=pecT;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	1495558	1495590	.	+	.	ID=id2509;Note=PS00639 Eukaryotic thiol (cysteine) proteases histidine active site.;gbkey=misc_feature;gene=pecT;inference=protein motif:Prosite:PS00639
AM286415.1	EMBL	sequence_feature	1495636	1496223	.	+	.	ID=id2510;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 111.2%2C E-value 1.3e-30;gbkey=misc_feature;gene=pecT;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	1497136	1497588	.	+	.	ID=gene1344;Name=nuoA;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=YE1344
AM286415.1	EMBL	CDS	1497136	1497588	.	+	0	ID=cds1290;Parent=gene1344;Dbxref=EnsemblGenomes-Gn:YE1344,EnsemblGenomes-Tr:CAL11432,GOA:A1JLG0,InterPro:IPR000440,InterPro:IPR023043,NCBI_GP:CAL11432.1;Name=CAL11432.1;Note=Note the predicted product of this CDS is shorter than those of other Yersinia orthologues and may have a frameshift following codon 147. However this is thought unlikely to affect function.;gbkey=CDS;gene=nuoA;product=NADH dehydrogenase I chain A;protein_id=CAL11432.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1497262	1497504	.	+	.	ID=id2511;Note=Pfam match to entry PF00507 oxidored_q4%2CNADH-ubiquinone/plastoquinone oxidoreductase%2C chain 3 %2Cscore 145.4%2C E-value 6.4e-41;gbkey=misc_feature;gene=nuoA;inference=protein motif:PFAM:PF00507
AM286415.1	EMBL	sequence_feature	1497280	1497327	.	+	.	ID=id2512;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=nuoA;inference=protein motif:Prosite:PS00012
AM286415.1	EMBL	gene	1497746	1498423	.	+	.	ID=gene1345;Name=nuoB;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=YE1345
AM286415.1	EMBL	CDS	1497746	1498423	.	+	0	ID=cds1291;Parent=gene1345;Dbxref=EnsemblGenomes-Gn:YE1345,EnsemblGenomes-Tr:CAL11433,GOA:A1JLG4,InterPro:IPR006137,InterPro:IPR006138,NCBI_GP:CAL11433.1;Name=CAL11433.1;gbkey=CDS;gene=nuoB;product=NADH dehydrogenase I chain B;protein_id=CAL11433.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1497917	1497949	.	+	.	ID=id2513;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nuoB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1497956	1498279	.	+	.	ID=id2514;Note=Pfam match to entry PF01058 oxidored_q6%2C NADH ubiquinone oxidoreductase%2C 20 Kd subunit%2C score 191.8%2CE-value 7e-55;gbkey=misc_feature;gene=nuoB;inference=protein motif:PFAM:PF01058
AM286415.1	EMBL	sequence_feature	1498190	1498240	.	+	.	ID=id2515;Note=PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature.;gbkey=misc_feature;gene=nuoB;inference=protein motif:Prosite:PS01150
AM286415.1	EMBL	gene	1498563	1500359	.	+	.	ID=gene1346;Name=nuoD;gbkey=Gene;gene=nuoD;gene_biotype=protein_coding;locus_tag=YE1346
AM286415.1	EMBL	CDS	1498563	1500359	.	+	0	ID=cds1292;Parent=gene1346;Dbxref=EnsemblGenomes-Gn:YE1346,EnsemblGenomes-Tr:CAL11434,GOA:A1JLG6,InterPro:IPR001135,InterPro:IPR001268,InterPro:IPR010218,InterPro:IPR014029,InterPro:IPR022885,InterPro:IPR023062,InterPro:IPR029014,NCBI_GP:CAL11434.1;Name=CAL11434.1;gbkey=CDS;gene=nuoD;product=NADH dehydrogenase I chain C/D;protein_id=CAL11434.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1498896	1499102	.	+	.	ID=id2516;Note=Pfam match to entry PF00329 complex1_30Kd%2CRespiratory-chain NADH dehydrogenase%2C 30 Kd subunit %2Cscore 146.2%2C E-value 3.8e-41;gbkey=misc_feature;gene=nuoD;inference=protein motif:PFAM:PF00329
AM286415.1	EMBL	sequence_feature	1499313	1499348	.	+	.	ID=id2517;Note=PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature.;gbkey=misc_feature;gene=nuoD;inference=protein motif:Prosite:PS00535
AM286415.1	EMBL	sequence_feature	1499544	1500356	.	+	.	ID=id2518;Note=Pfam match to entry PF00346 complex1_49Kd%2CRespiratory-chain NADH dehydrogenase%2C 49 Kd subunit %2Cscore 600.9%2C E-value 5e-178;gbkey=misc_feature;gene=nuoD;inference=protein motif:PFAM:PF00346
AM286415.1	EMBL	gene	1500407	1500925	.	+	.	ID=gene1347;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=YE1347
AM286415.1	EMBL	CDS	1500407	1500925	.	+	0	ID=cds1293;Parent=gene1347;Dbxref=EnsemblGenomes-Gn:YE1347,EnsemblGenomes-Tr:CAL11435,GOA:A1JLG9,InterPro:IPR002023,InterPro:IPR012336,UniProtKB/TrEMBL:A1JLG9,NCBI_GP:CAL11435.1;Name=CAL11435.1;gbkey=CDS;gene=nuoE;product=NADH dehydrogenase I chain E;protein_id=CAL11435.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1500458	1500922	.	+	.	ID=id2519;Note=Pfam match to entry PF01257 complex1_24kD%2CRespiratory-chain NADH dehydrogenase 24 Kd subunit%2C score 324.7%2C E-value 6.8e-95;gbkey=misc_feature;gene=nuoE;inference=protein motif:PFAM:PF01257
AM286415.1	EMBL	sequence_feature	1500791	1500847	.	+	.	ID=id2520;Note=PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature.;gbkey=misc_feature;gene=nuoE;inference=protein motif:Prosite:PS01099
AM286415.1	EMBL	gene	1500922	1502292	.	+	.	ID=gene1348;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=YE1348
AM286415.1	EMBL	CDS	1500922	1502292	.	+	0	ID=cds1294;Parent=gene1348;Dbxref=EnsemblGenomes-Gn:YE1348,EnsemblGenomes-Tr:CAL11436,GOA:A1JLH1,InterPro:IPR001949,InterPro:IPR011537,InterPro:IPR011538,InterPro:IPR019554,InterPro:IPR019575,UniProtKB/TrEMBL:A1JLH1,NCBI_GP:CAL11436.1;Name=CAL11436.1;gbkey=CDS;gene=nuoF;product=NADH dehydrogenase I chain F;protein_id=CAL11436.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1501039	1501833	.	+	.	ID=id2521;Note=Pfam match to entry PF01512 Complex1_51K%2CRespiratory-chain NADH dehydrogenase 51 Kd subunit%2C score 577.5%2C E-value 5.6e-171;gbkey=misc_feature;gene=nuoF;inference=protein motif:PFAM:PF01512
AM286415.1	EMBL	sequence_feature	1501462	1501509	.	+	.	ID=id2522;Note=PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1.;gbkey=misc_feature;gene=nuoF;inference=protein motif:Prosite:PS00644
AM286415.1	EMBL	sequence_feature	1501993	1502028	.	+	.	ID=id2523;Note=PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2.;gbkey=misc_feature;gene=nuoF;inference=protein motif:Prosite:PS00645
AM286415.1	EMBL	gene	1502398	1505142	.	+	.	ID=gene1349;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=YE1349
AM286415.1	EMBL	CDS	1502398	1505142	.	+	0	ID=cds1295;Parent=gene1349;Dbxref=EnsemblGenomes-Gn:YE1349,EnsemblGenomes-Tr:CAL11437,GOA:A1JLH3,InterPro:IPR000283,InterPro:IPR001041,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR010228,InterPro:IPR012675,InterPro:IPR019574,UniProtKB/TrEMBL:A1JLH3,NCBI_GP:CAL11437.1;Name=CAL11437.1;gbkey=CDS;gene=nuoG;product=NADH dehydrogenase I chain G;protein_id=CAL11437.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1502407	1502616	.	+	.	ID=id2524;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domain%2C score 54.9%2C E-value 1.2e-13;gbkey=misc_feature;gene=nuoG;inference=protein motif:PFAM:PF00111
AM286415.1	EMBL	sequence_feature	1502488	1502541	.	+	.	ID=id2525;Note=PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1.;gbkey=misc_feature;gene=nuoG;inference=protein motif:Prosite:PS00641
AM286415.1	EMBL	sequence_feature	1502500	1502532	.	+	.	ID=id2526;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nuoG;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1502704	1502742	.	+	.	ID=id2527;Note=PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2.;gbkey=misc_feature;gene=nuoG;inference=protein motif:Prosite:PS00642
AM286415.1	EMBL	sequence_feature	1502845	1502877	.	+	.	ID=id2528;Note=PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3.;gbkey=misc_feature;gene=nuoG;inference=protein motif:Prosite:PS00643
AM286415.1	EMBL	gene	1505139	1506116	.	+	.	ID=gene1350;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=YE1350
AM286415.1	EMBL	CDS	1505139	1506116	.	+	0	ID=cds1296;Parent=gene1350;Dbxref=EnsemblGenomes-Gn:YE1350,EnsemblGenomes-Tr:CAL11438,GOA:A1JLH7,InterPro:IPR001694,InterPro:IPR018086,NCBI_GP:CAL11438.1;Name=CAL11438.1;gbkey=CDS;gene=nuoH;product=NADH dehydrogenase I chain H;protein_id=CAL11438.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1505169	1506104	.	+	.	ID=id2529;Note=Pfam match to entry PF00146 NADHdh%2C NADH dehydrogenase%2C score 587.5%2C E-value 5.4e-174;gbkey=misc_feature;gene=nuoH;inference=protein motif:PFAM:PF00146
AM286415.1	EMBL	sequence_feature	1505172	1505240	.	+	.	ID=id2530;Note=8 probable transmembrane helices predicted for YE1350 by TMHMM2.0 at aa 12-34%2C 81-103%2C 115-137%2C 152-174%2C186-208%2C 234-256%2C 263-285 and 300-322;gbkey=misc_feature;gene=nuoH;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	1505379	1505447	.	+	.	ID=id2530;Note=8 probable transmembrane helices predicted for YE1350 by TMHMM2.0 at aa 12-34%2C 81-103%2C 115-137%2C 152-174%2C186-208%2C 234-256%2C 263-285 and 300-322;gbkey=misc_feature;gene=nuoH;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	1505481	1505549	.	+	.	ID=id2530;Note=8 probable transmembrane helices predicted for YE1350 by TMHMM2.0 at aa 12-34%2C 81-103%2C 115-137%2C 152-174%2C186-208%2C 234-256%2C 263-285 and 300-322;gbkey=misc_feature;gene=nuoH;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	1505592	1505660	.	+	.	ID=id2530;Note=8 probable transmembrane helices predicted for YE1350 by TMHMM2.0 at aa 12-34%2C 81-103%2C 115-137%2C 152-174%2C186-208%2C 234-256%2C 263-285 and 300-322;gbkey=misc_feature;gene=nuoH;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	1505694	1505762	.	+	.	ID=id2530;Note=8 probable transmembrane helices predicted for YE1350 by TMHMM2.0 at aa 12-34%2C 81-103%2C 115-137%2C 152-174%2C186-208%2C 234-256%2C 263-285 and 300-322;gbkey=misc_feature;gene=nuoH;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	1505838	1505906	.	+	.	ID=id2530;Note=8 probable transmembrane helices predicted for YE1350 by TMHMM2.0 at aa 12-34%2C 81-103%2C 115-137%2C 152-174%2C186-208%2C 234-256%2C 263-285 and 300-322;gbkey=misc_feature;gene=nuoH;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	1505925	1505993	.	+	.	ID=id2530;Note=8 probable transmembrane helices predicted for YE1350 by TMHMM2.0 at aa 12-34%2C 81-103%2C 115-137%2C 152-174%2C186-208%2C 234-256%2C 263-285 and 300-322;gbkey=misc_feature;gene=nuoH;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	1506036	1506104	.	+	.	ID=id2530;Note=8 probable transmembrane helices predicted for YE1350 by TMHMM2.0 at aa 12-34%2C 81-103%2C 115-137%2C 152-174%2C186-208%2C 234-256%2C 263-285 and 300-322;gbkey=misc_feature;gene=nuoH;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	1505304	1505351	.	+	.	ID=id2531;Note=PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1.;gbkey=misc_feature;gene=nuoH;inference=protein motif:Prosite:PS00667
AM286415.1	EMBL	sequence_feature	1505769	1505810	.	+	.	ID=id2532;Note=PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2.;gbkey=misc_feature;gene=nuoH;inference=protein motif:Prosite:PS00668
AM286415.1	EMBL	gene	1506131	1506673	.	+	.	ID=gene1351;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=YE1351
AM286415.1	EMBL	CDS	1506131	1506673	.	+	0	ID=cds1297;Parent=gene1351;Dbxref=EnsemblGenomes-Gn:YE1351,EnsemblGenomes-Tr:CAL11439,GOA:A1JLI2,InterPro:IPR001450,InterPro:IPR010226,InterPro:IPR017896,InterPro:IPR017900,NCBI_GP:CAL11439.1;Name=CAL11439.1;gbkey=CDS;gene=nuoI;product=NADH Dehydrogenase I chain I;protein_id=CAL11439.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1506287	1506358	.	+	.	ID=id2533;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 21.9%2C E-value 6.6e-05;gbkey=misc_feature;gene=nuoI;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	1506308	1506343	.	+	.	ID=id2534;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=nuoI;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	1506404	1506475	.	+	.	ID=id2535;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 38.1%2C E-value 1.3e-08;gbkey=misc_feature;gene=nuoI;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	1506425	1506460	.	+	.	ID=id2536;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=nuoI;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	1506686	1507231	.	+	.	ID=gene1352;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=YE1352
AM286415.1	EMBL	CDS	1506686	1507231	.	+	0	ID=cds1298;Parent=gene1352;Dbxref=EnsemblGenomes-Gn:YE1352,EnsemblGenomes-Tr:CAL11442,GOA:A1JLI7,InterPro:IPR001457,UniProtKB/TrEMBL:A1JLI7,NCBI_GP:CAL11442.1;Name=CAL11442.1;gbkey=CDS;gene=nuoJ;product=NADH dehydrogenase I chain J;protein_id=CAL11442.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1506686	1507162	.	+	.	ID=id2537;Note=Pfam match to entry PF00499 oxidored_q3%2CNADH-ubiquinone/plastoquinone oxidoreductase chain 6 %2Cscore 51.2%2C E-value 1.4e-12;gbkey=misc_feature;gene=nuoJ;inference=protein motif:PFAM:PF00499
AM286415.1	EMBL	sequence_feature	1506698	1506751	.	+	.	ID=id2538;Note=5 probable transmembrane helices predicted for YE1352 by TMHMM2.0 at aa 5-22%2C 29-51%2C 56-78%2C 91-113 and 133-155;gbkey=misc_feature;gene=nuoJ;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	1506770	1506838	.	+	.	ID=id2538;Note=5 probable transmembrane helices predicted for YE1352 by TMHMM2.0 at aa 5-22%2C 29-51%2C 56-78%2C 91-113 and 133-155;gbkey=misc_feature;gene=nuoJ;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	1506851	1506919	.	+	.	ID=id2538;Note=5 probable transmembrane helices predicted for YE1352 by TMHMM2.0 at aa 5-22%2C 29-51%2C 56-78%2C 91-113 and 133-155;gbkey=misc_feature;gene=nuoJ;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	1506956	1507024	.	+	.	ID=id2538;Note=5 probable transmembrane helices predicted for YE1352 by TMHMM2.0 at aa 5-22%2C 29-51%2C 56-78%2C 91-113 and 133-155;gbkey=misc_feature;gene=nuoJ;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	1507082	1507150	.	+	.	ID=id2538;Note=5 probable transmembrane helices predicted for YE1352 by TMHMM2.0 at aa 5-22%2C 29-51%2C 56-78%2C 91-113 and 133-155;gbkey=misc_feature;gene=nuoJ;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	1507228	1507530	.	+	.	ID=gene1353;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=YE1353
AM286415.1	EMBL	CDS	1507228	1507530	.	+	0	ID=cds1299;Parent=gene1353;Dbxref=EnsemblGenomes-Gn:YE1353,EnsemblGenomes-Tr:CAL11444,GOA:A1JLI8,InterPro:IPR001133,NCBI_GP:CAL11444.1;Name=CAL11444.1;gbkey=CDS;gene=nuoK;product=NADH dehydrogenase i chain k;protein_id=CAL11444.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1507231	1507527	.	+	.	ID=id2539;Note=Pfam match to entry PF00420 oxidored_q2%2CNADH-ubiquinone/plastoquinone oxidoreductase chain 4L %2Cscore 79.6%2C E-value 4.1e-21;gbkey=misc_feature;gene=nuoK;inference=protein motif:PFAM:PF00420
AM286415.1	EMBL	sequence_feature	1507237	1507296	.	+	.	ID=id2540;Note=3 probable transmembrane helices predicted for YE1353 by TMHMM2.0 at aa 4-23%2C 28-50 and 60-82;gbkey=misc_feature;gene=nuoK;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1507309	1507377	.	+	.	ID=id2540;Note=3 probable transmembrane helices predicted for YE1353 by TMHMM2.0 at aa 4-23%2C 28-50 and 60-82;gbkey=misc_feature;gene=nuoK;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1507405	1507473	.	+	.	ID=id2540;Note=3 probable transmembrane helices predicted for YE1353 by TMHMM2.0 at aa 4-23%2C 28-50 and 60-82;gbkey=misc_feature;gene=nuoK;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	1507527	1509371	.	+	.	ID=gene1354;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=YE1354
AM286415.1	EMBL	CDS	1507527	1509371	.	+	0	ID=cds1300;Parent=gene1354;Dbxref=EnsemblGenomes-Gn:YE1354,EnsemblGenomes-Tr:CAL11445,GOA:A1JLJ2,InterPro:IPR001516,InterPro:IPR001750,InterPro:IPR003945,InterPro:IPR018393,UniProtKB/TrEMBL:A1JLJ2,NCBI_GP:CAL11445.1;Name=CAL11445.1;gbkey=CDS;gene=nuoL;product=NADH dehydrogenase I chain L;protein_id=CAL11445.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1507536	1507589	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=1/16
AM286415.1	EMBL	sequence_feature	1507608	1507676	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=2/16
AM286415.1	EMBL	sequence_feature	1507785	1507853	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=3/16
AM286415.1	EMBL	sequence_feature	1507872	1507931	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=4/16
AM286415.1	EMBL	sequence_feature	1507941	1508009	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=5/16
AM286415.1	EMBL	sequence_feature	1508046	1508114	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=6/16
AM286415.1	EMBL	sequence_feature	1508172	1508240	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=7/16
AM286415.1	EMBL	sequence_feature	1508277	1508336	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=8/16
AM286415.1	EMBL	sequence_feature	1508364	1508432	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=9/16
AM286415.1	EMBL	sequence_feature	1508451	1508519	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=10/16
AM286415.1	EMBL	sequence_feature	1508529	1508597	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=11/16
AM286415.1	EMBL	sequence_feature	1508658	1508726	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=12/16
AM286415.1	EMBL	sequence_feature	1508769	1508837	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=13/16
AM286415.1	EMBL	sequence_feature	1508895	1508963	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=14/16
AM286415.1	EMBL	sequence_feature	1509006	1509074	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=15/16
AM286415.1	EMBL	sequence_feature	1509309	1509365	.	+	.	ID=id2541;Note=16 probable transmembrane helices predicted for YE1354 by TMHMM2.0 at aa 4-21%2C 28-50%2C 87-109%2C 116-135%2C139-161%2C 174-196%2C 216-238%2C 251-270%2C 280-302%2C 309-331%2C335-357%2C 378-400%2C 415-437%2C 457-479%2C 494-516 and 595-613;gbkey=misc_feature;gene=nuoL;inference=protein motif:TMHMM:2.0;part=16/16
AM286415.1	EMBL	sequence_feature	1507716	1507901	.	+	.	ID=id2542;Note=Pfam match to entry PF00662 oxidored_q1_N%2CNADH-Ubiquinone oxidoreductase (complex I)%2C chain 5 N-terminus%2C score 110.6%2C E-value 1.9e-30;gbkey=misc_feature;gene=nuoL;inference=protein motif:PFAM:PF00662
AM286415.1	EMBL	sequence_feature	1507932	1508813	.	+	.	ID=id2543;Note=Pfam match to entry PF00361 oxidored_q1%2CNADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 403.9%2C E-value 9.9e-119;gbkey=misc_feature;gene=nuoL;inference=protein motif:PFAM:PF00361
AM286415.1	EMBL	sequence_feature	1508571	1508603	.	+	.	ID=id2544;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nuoL;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1509390	1510913	.	+	.	ID=gene1355;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=YE1355
AM286415.1	EMBL	CDS	1509390	1510913	.	+	0	ID=cds1301;Parent=gene1355;Dbxref=EnsemblGenomes-Gn:YE1355,EnsemblGenomes-Tr:CAL11446,GOA:A1JLK8,InterPro:IPR001750,InterPro:IPR003918,InterPro:IPR010227,UniProtKB/TrEMBL:A1JLK8,NCBI_GP:CAL11446.1;Name=CAL11446.1;gbkey=CDS;gene=nuoM;product=NADH dehydrogenase I chain M;protein_id=CAL11446.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1509399	1509443	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	1509477	1509536	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	1509630	1509698	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	1509732	1509788	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	1509798	1509866	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	1509927	1509995	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	1510053	1510121	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	1510140	1510208	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	1510251	1510310	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	1510329	1510397	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	1510410	1510478	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	1510536	1510604	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	1510632	1510700	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	1510779	1510838	.	+	.	ID=id2545;Note=14 probable transmembrane helices predicted for YE1355 by TMHMM2.0 at aa 4-18%2C 30-49%2C 81-103%2C 115-133%2C137-159%2C 180-202%2C 222-244%2C 251-273%2C 288-307%2C 314-336%2C341-363%2C 383-405%2C 415-437 and 464-483;gbkey=misc_feature;gene=nuoM;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	sequence_feature	1509786	1510688	.	+	.	ID=id2546;Note=Pfam match to entry PF00361 oxidored_q1%2CNADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 272.8%2C E-value 2.8e-79;gbkey=misc_feature;gene=nuoM;inference=protein motif:PFAM:PF00361
AM286415.1	EMBL	gene	1510920	1512377	.	+	.	ID=gene1356;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=YE1356
AM286415.1	EMBL	CDS	1510920	1512377	.	+	0	ID=cds1302;Parent=gene1356;Dbxref=EnsemblGenomes-Gn:YE1356,EnsemblGenomes-Tr:CAL11447,GOA:A1JLL1,InterPro:IPR001750,InterPro:IPR010096,NCBI_GP:CAL11447.1;Name=CAL11447.1;gbkey=CDS;gene=nuoN;product=NADH dehydrogenase I chain N;protein_id=CAL11447.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1510947	1511006	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	1511025	1511093	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	1511136	1511204	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	1511229	1511282	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	1511292	1511360	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	1511394	1511462	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	1511520	1511588	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	1511625	1511693	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	1511721	1511789	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	1511808	1511876	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	1511904	1511972	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	1512030	1512098	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	1512141	1512200	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	1512261	1512329	.	+	.	ID=id2547;Note=14 probable transmembrane helices predicted for YE1356 by TMHMM2.0 at aa 10-29%2C 36-58%2C 73-95%2C 104-121%2C125-147%2C 159-181%2C 201-223%2C 236-258%2C 268-290%2C 297-319%2C329-351%2C 371-393%2C 408-427 and 448-470;gbkey=misc_feature;gene=nuoN;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	sequence_feature	1511283	1512185	.	+	.	ID=id2548;Note=Pfam match to entry PF00361 oxidored_q1%2CNADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 315.1%2C E-value 5.5e-92;gbkey=misc_feature;gene=nuoN;inference=protein motif:PFAM:PF00361
AM286415.1	EMBL	gene	1512494	1513834	.	+	.	ID=gene1357;Name=YE1357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1357
AM286415.1	EMBL	CDS	1512494	1513834	.	+	0	ID=cds1303;Parent=gene1357;Dbxref=EnsemblGenomes-Gn:YE1357,EnsemblGenomes-Tr:CAL11449,UniProtKB/TrEMBL:A1JLL2,NCBI_GP:CAL11449.1;Name=CAL11449.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11449.1;transl_table=11
AM286415.1	EMBL	gene	1513997	1514488	.	+	.	ID=gene1358;Name=YE1358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1358
AM286415.1	EMBL	CDS	1513997	1514488	.	+	0	ID=cds1304;Parent=gene1358;Dbxref=EnsemblGenomes-Gn:YE1358,EnsemblGenomes-Tr:CAL11450,InterPro:IPR009476,UniProtKB/TrEMBL:A1JLL4,NCBI_GP:CAL11450.1;Name=CAL11450.1;Note=Similar to many proteins of unknown function including: Escherichia coli hypothetical protein YcdZ or b1036 SWALL:YCDZ_ECOLI (SWALL:P75916) (163 aa) fasta scores: E(): 6.7e-45%2C 78.8 38d in 151 aa and Salmonella typhimurium hypothetical protein YcdZ or Stm1138 SWALL:YCDZ_SALTY (SWALL:O54290) (160 aa) fasta scores: E(): 4.5e-44%2C 76.82 38d in 151 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75916;product=putative exported protein;protein_id=CAL11450.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1514144	1514212	.	+	.	ID=id2549;Note=4 probable transmembrane helices predicted for YE1358 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101 and 123-145;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1514231	1514299	.	+	.	ID=id2549;Note=4 probable transmembrane helices predicted for YE1358 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101 and 123-145;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1514363	1514431	.	+	.	ID=id2549;Note=4 probable transmembrane helices predicted for YE1358 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101 and 123-145;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	repeat_region	1514896	1516278	.	+	.	ID=id2550;Note=Insertion sequence element IS1667;gbkey=repeat_region
AM286415.1	EMBL	gene	1514983	1516002	.	+	.	ID=gene1359;Name=YE1359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1359
AM286415.1	EMBL	CDS	1514983	1516002	.	+	0	ID=cds1305;Parent=gene1359;Dbxref=EnsemblGenomes-Gn:YE1359,EnsemblGenomes-Tr:CAL11451,GOA:A1JL33,InterPro:IPR002525,InterPro:IPR003346,UniProtKB/TrEMBL:A1JL33,NCBI_GP:CAL11451.1;Name=CAL11451.1;Note=Similar to Pseudomonas putida transposase Tnpa1 protein SWALL:Q9K2X6 (EMBL:AJ288911) (344 aa) fasta scores: E(): 2.3e-56%2C 45.93 38d in 344 aa and to Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 6e-50%2C 42.16 38d in 332 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=putative transposase for IS1667;protein_id=CAL11451.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1515172	1515450	.	+	.	ID=id2551;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 30.3%2C E-value 2.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	sequence_feature	1515541	1515870	.	+	.	ID=id2552;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 102.0%2CE-value 7.7e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	gene	1516482	1516949	.	-	.	ID=gene1360;Name=YE1361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1361
AM286415.1	EMBL	CDS	1516482	1516949	.	-	0	ID=cds1306;Parent=gene1360;Dbxref=EnsemblGenomes-Gn:YE1361,EnsemblGenomes-Tr:CAL11452,InterPro:IPR004375,UniProtKB/TrEMBL:A1JLL6,NCBI_GP:CAL11452.1;Name=CAL11452.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11452.1;transl_table=11
AM286415.1	EMBL	gene	1516990	1517520	.	-	.	ID=gene1361;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;gene_synonym=gntV;locus_tag=YE1362
AM286415.1	EMBL	CDS	1516990	1517520	.	-	0	ID=cds1307;Parent=gene1361;Dbxref=EnsemblGenomes-Gn:YE1362,EnsemblGenomes-Tr:CAL11453,GOA:A1JLL7,InterPro:IPR000623,InterPro:IPR006001,InterPro:IPR027417,UniProtKB/TrEMBL:A1JLL7,NCBI_GP:CAL11453.1;Name=CAL11453.1;gbkey=CDS;gene=idnK;product=putative thermosensitive gluconokinase;protein_id=CAL11453.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1517470	1517493	.	-	.	ID=id2553;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=idnK;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1517663	1518427	.	-	.	ID=gene1362;Name=idnO;gbkey=Gene;gene=idnO;gene_biotype=protein_coding;locus_tag=YE1363
AM286415.1	EMBL	CDS	1517663	1518427	.	-	0	ID=cds1308;Parent=gene1362;Dbxref=EnsemblGenomes-Gn:YE1363,EnsemblGenomes-Tr:CAL11454,GOA:A1JLL8,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,UniProtKB/TrEMBL:A1JLL8,NCBI_GP:CAL11454.1;Name=CAL11454.1;gbkey=CDS;gene=idnO;product=gluconate 5-dehydrogenase;protein_id=CAL11454.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1517678	1518406	.	-	.	ID=id2554;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 331.1%2C E-value 8.1e-97;gbkey=misc_feature;gene=idnO;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	sequence_feature	1517909	1517995	.	-	.	ID=id2555;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=idnO;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	gene	1518810	1519802	.	+	.	ID=gene1363;Name=YE1364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1364
AM286415.1	EMBL	CDS	1518810	1519802	.	+	0	ID=cds1309;Parent=gene1363;Dbxref=EnsemblGenomes-Gn:YE1364,EnsemblGenomes-Tr:CAL11455,GOA:A1JLL9,InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JLL9,NCBI_GP:CAL11455.1;Name=CAL11455.1;gbkey=CDS;product=putative LacI-family transcriptional regulatory protein;protein_id=CAL11455.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1518819	1518902	.	+	.	ID=id2556;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 46.1%2C E-value 5e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	1518825	1518890	.	+	.	ID=id2557;Note=Predicted helix-turn-helix motif with score 2165.000%2C SD 6.56 at aa 6-27%2C sequence VTLQDIALLAGVTKMTVSRYLR;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1518831	1518887	.	+	.	ID=id2558;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	sequence_feature	1518996	1519781	.	+	.	ID=id2559;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 63.2%2C E-value 3.6e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	1520242	1521150	.	+	.	ID=gene1364;Name=YE1365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1365
AM286415.1	EMBL	CDS	1520242	1521150	.	+	0	ID=cds1310;Parent=gene1364;Dbxref=EnsemblGenomes-Gn:YE1365,EnsemblGenomes-Tr:CAL11456,GOA:A1JLM0,InterPro:IPR006139,InterPro:IPR006140,InterPro:IPR016040,UniProtKB/TrEMBL:A1JLM0,NCBI_GP:CAL11456.1;Name=CAL11456.1;gbkey=CDS;product=putative D-isomer specific 2-hydroxyacid dehydrogenase family protein;protein_id=CAL11456.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1520275	1520499	.	+	.	ID=id2560;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain %2Cscore 35.7%2C E-value 6.8e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00389
AM286415.1	EMBL	sequence_feature	1520503	1521042	.	+	.	ID=id2561;Note=Pfam match to entry PF02826 2-Hacid_DH_C%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain %2Cscore 137.5%2C E-value 1.6e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF02826
AM286415.1	EMBL	sequence_feature	1520644	1520727	.	+	.	ID=id2562;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00065
AM286415.1	EMBL	gene	1521325	1522641	.	+	.	ID=gene1365;Name=YE1366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1366
AM286415.1	EMBL	CDS	1521325	1522641	.	+	0	ID=cds1311;Parent=gene1365;Dbxref=EnsemblGenomes-Gn:YE1366,EnsemblGenomes-Tr:CAL11457,GOA:A1JJZ4,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JJZ4,NCBI_GP:CAL11457.1;Name=CAL11457.1;gbkey=CDS;product=putative sugar transporter;protein_id=CAL11457.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1521361	1522596	.	+	.	ID=id2563;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -33.6%2C E-value 1.2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	1521361	1521429	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1521457	1521525	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1521562	1521621	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1521634	1521702	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1521739	1521807	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1521820	1521888	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1522135	1522203	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1522231	1522290	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1522309	1522377	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1522420	1522488	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1522501	1522560	.	+	.	ID=id2564;Note=11 probable transmembrane helices predicted for YE1366 by TMHMM2.0 at aa 13-35%2C 45-67%2C 80-99%2C 104-126%2C139-161%2C 166-188%2C 271-293%2C 303-322%2C 329-351%2C 366-388 and 393-412;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	1522704	1523210	.	+	.	ID=gene1366;Name=YE1367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1367
AM286415.1	EMBL	CDS	1522704	1523210	.	+	0	ID=cds1312;Parent=gene1366;Dbxref=EnsemblGenomes-Gn:YE1367,EnsemblGenomes-Tr:CAL11458,InterPro:IPR005624,InterPro:IPR010371,NCBI_GP:CAL11458.1;Name=CAL11458.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11458.1;transl_table=11
AM286415.1	EMBL	gene	1523214	1525031	.	+	.	ID=gene1367;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=YE1368
AM286415.1	EMBL	CDS	1523214	1525031	.	+	0	ID=cds1313;Parent=gene1367;Dbxref=EnsemblGenomes-Gn:YE1368,EnsemblGenomes-Tr:CAL11459,GOA:A1JK05,InterPro:IPR000581,InterPro:IPR004786,InterPro:IPR015928,InterPro:IPR020558,UniProtKB/TrEMBL:A1JK05,NCBI_GP:CAL11459.1;Name=CAL11459.1;gbkey=CDS;gene=edd;product=phosphogluconate dehydratase;protein_id=CAL11459.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1523343	1523375	.	+	.	ID=id2565;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=edd;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1523412	1525022	.	+	.	ID=id2566;Note=Pfam match to entry PF00920 ILVD_EDD%2C Dehydratase family%2C score 935.9%2C E-value 7.3e-279;gbkey=misc_feature;gene=edd;inference=protein motif:PFAM:PF00920
AM286415.1	EMBL	sequence_feature	1523679	1523711	.	+	.	ID=id2567;Note=PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1.;gbkey=misc_feature;gene=edd;inference=protein motif:Prosite:PS00886
AM286415.1	EMBL	sequence_feature	1524732	1524767	.	+	.	ID=id2568;Note=PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2.;gbkey=misc_feature;gene=edd;inference=protein motif:Prosite:PS00887
AM286415.1	EMBL	gene	1525083	1526504	.	-	.	ID=gene1368;Name=YE1369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1369
AM286415.1	EMBL	CDS	1525083	1526504	.	-	0	ID=cds1314;Parent=gene1368;Dbxref=EnsemblGenomes-Gn:YE1369,EnsemblGenomes-Tr:CAL11460,GOA:A1JK29,InterPro:IPR003088,InterPro:IPR009056,InterPro:IPR014353,UniProtKB/TrEMBL:A1JK29,NCBI_GP:CAL11460.1;Name=CAL11460.1;Note=Similar to many including: Pantoea agglomerans cytochrome C subunit II SWALL:Q9RH53 (EMBL:AF068066) (470 aa) fasta scores: E(): 9.5e-110%2C 61.48 38d in 470 aa%2C and to Gluconobacter oxydans sorbitol dehydrogenase cytochrome C subunit SldC SWALL:Q9LBK7 (EMBL:AB039821) (478 aa) fasta scores: E(): 7.4e-73%2C 44.25 38d in 479 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF068066;product=putative dehydrogenase%2C cytochrome C subunit;protein_id=CAL11460.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1525113	1525181	.	-	.	ID=id2569;Note=1 probable transmembrane helix predicted for YE1369 by TMHMM2.0 at aa 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1525260	1525541	.	-	.	ID=id2570;Note=Pfam match to entry PF00034 cytochrome_c%2CCytochrome c%2C score 9.6%2C E-value 0.0028;gbkey=misc_feature;inference=protein motif:PFAM:PF00034
AM286415.1	EMBL	sequence_feature	1525485	1525502	.	-	.	ID=id2571;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1525908	1525925	.	-	.	ID=id2572;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1526352	1526369	.	-	.	ID=id2573;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	1526501	1528153	.	-	.	ID=gene1369;Name=YE1370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1370
AM286415.1	EMBL	CDS	1526501	1528153	.	-	0	ID=cds1315;Parent=gene1369;Dbxref=EnsemblGenomes-Gn:YE1370,EnsemblGenomes-Tr:CAL11461,GOA:A1JK44,InterPro:IPR006076,InterPro:IPR007867,UniProtKB/TrEMBL:A1JK44,NCBI_GP:CAL11461.1;Name=CAL11461.1;Note=Similar to many incluuding: Pantoea agglomerans dehydrogenase subunit I SWALL:Q9RH54 (EMBL:AF068066) (551 aa) fasta scores: E(): 5.7e-188%2C 80.69 38d in 549 aa and Pantoea citrea 2-keto-gluconate dehydrogenase subunit KdgB SWALL:Q9XCR0 (EMBL:AF131202) (553 aa) fasta scores: E(): 8.8e-188%2C 81.8 38d in 544 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF131202;product=putative dehydrogenase subunit;protein_id=CAL11461.1;transl_table=11
AM286415.1	EMBL	gene	1528153	1528734	.	-	.	ID=gene1370;Name=YE1370A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1370A
AM286415.1	EMBL	CDS	1528153	1528734	.	-	0	ID=cds1316;Parent=gene1370;Dbxref=EnsemblGenomes-Gn:YE1370A,EnsemblGenomes-Tr:CAL11462,InterPro:IPR024651,UniProtKB/TrEMBL:A1JK51,NCBI_GP:CAL11462.1;Name=CAL11462.1;Note=Similar to Pantoea citrea 2-keto-gluconate dehydrogenase subunit KdgA SWALL:Q9XCR1 (EMBL:AF131202) (189 aa) fasta scores: E(): 4.7e-19%2C 38.41 38d in 177 aa and to Pantoea agglomerans dehydrogenase subunit III SWALL:Q9RH55 (EMBL:AF068066) (188 aa) fasta scores: E(): 3.5e-23%2C 45.76 38d in 177 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF131202;product=putative dehydrogenase subunit;protein_id=CAL11462.1;transl_table=11
AM286415.1	EMBL	gene	1529089	1529397	.	+	.	ID=gene1371;Name=elaB;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=YE1371
AM286415.1	EMBL	CDS	1529089	1529397	.	+	0	ID=cds1317;Parent=gene1371;Dbxref=EnsemblGenomes-Gn:YE1371,EnsemblGenomes-Tr:CAL11463,InterPro:IPR010279,UniProtKB/TrEMBL:A1JKQ6,NCBI_GP:CAL11463.1;Name=CAL11463.1;gbkey=CDS;gene=elaB;product=putative membrane protein;protein_id=CAL11463.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1529329	1529388	.	+	.	ID=id2574;Note=1 probable transmembrane helix predicted for YE1371 by TMHMM2.0 at aa 81-100;gbkey=misc_feature;gene=elaB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1529782	1532073	.	+	.	ID=gene1372;Name=YE1372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1372
AM286415.1	EMBL	CDS	1529782	1532073	.	+	0	ID=cds1318;Parent=gene1372;Dbxref=EnsemblGenomes-Gn:YE1372,EnsemblGenomes-Tr:CAL11465,GOA:A1JKS8,InterPro:IPR003991,InterPro:IPR005546,InterPro:IPR006315,UniProtKB/TrEMBL:A1JKS8,NCBI_GP:CAL11465.1;Name=CAL11465.1;gbkey=CDS;product=putative autotransporter protein;protein_id=CAL11465.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1531231	1532070	.	+	.	ID=id2575;Note=Pfam match to entry PF03797 Autotransporter%2CAutotransporter beta-domain%2C score 149.7%2C E-value 3.2e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF03797
AM286415.1	EMBL	sequence_feature	1531414	1531437	.	+	.	ID=id2576;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1531795	1531818	.	+	.	ID=id2577;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1532262	1533620	.	+	.	ID=gene1373;Name=menF;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=YE1373
AM286415.1	EMBL	CDS	1532262	1533620	.	+	0	ID=cds1319;Parent=gene1373;Dbxref=EnsemblGenomes-Gn:YE1373,EnsemblGenomes-Tr:CAL11467,GOA:A1JKT6,InterPro:IPR004561,InterPro:IPR005801,InterPro:IPR015890,UniProtKB/TrEMBL:A1JKT6,NCBI_GP:CAL11467.1;Name=CAL11467.1;gbkey=CDS;gene=menF;product=menaquinone-specific isochorismate synthase;protein_id=CAL11467.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1532805	1533584	.	+	.	ID=id2578;Note=Pfam match to entry PF00425 chorismate_bind%2Cchorismate binding enzyme%2C score 265.4%2C E-value 4.8e-77;gbkey=misc_feature;gene=menF;inference=protein motif:PFAM:PF00425
AM286415.1	EMBL	gene	1533849	1535522	.	+	.	ID=gene1374;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=YE1375
AM286415.1	EMBL	CDS	1533849	1535522	.	+	0	ID=cds1320;Parent=gene1374;Dbxref=EnsemblGenomes-Gn:YE1375,EnsemblGenomes-Tr:CAL11468,GOA:A1JKT8,InterPro:IPR004433,InterPro:IPR011766,InterPro:IPR012001,InterPro:IPR029035,InterPro:IPR029061,NCBI_GP:CAL11468.1;Name=CAL11468.1;gbkey=CDS;gene=menD;product=menaquinone biosynthesis protein;protein_id=CAL11468.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1533849	1534385	.	+	.	ID=id2579;Note=Pfam match to entry PF02776 TPP_enzymes_N%2C Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain %2Cscore -62.4%2C E-value 0.0013;gbkey=misc_feature;gene=menD;inference=protein motif:PFAM:PF02776
AM286415.1	EMBL	gene	1535609	1536343	.	+	.	ID=gene1375;Name=YE1376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1376
AM286415.1	EMBL	CDS	1535609	1536343	.	+	0	ID=cds1321;Parent=gene1375;Dbxref=EnsemblGenomes-Gn:YE1376,EnsemblGenomes-Tr:CAL11469,GOA:A1JKU0,InterPro:IPR022485,InterPro:IPR029058,NCBI_GP:CAL11469.1;Name=CAL11469.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11469.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1535657	1536292	.	+	.	ID=id2580;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 27.9%2C E-value 1.6e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00561
AM286415.1	EMBL	gene	1536357	1537214	.	+	.	ID=gene1376;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=YE1377
AM286415.1	EMBL	CDS	1536357	1537214	.	+	0	ID=cds1322;Parent=gene1376;Dbxref=EnsemblGenomes-Gn:YE1377,EnsemblGenomes-Tr:CAL11470,GOA:A1JKU2,InterPro:IPR001753,InterPro:IPR010198,InterPro:IPR014748,InterPro:IPR018376,InterPro:IPR029045,UniProtKB/TrEMBL:A1JKU2,NCBI_GP:CAL11470.1;Name=CAL11470.1;gbkey=CDS;gene=menB;product=naphthoate synthase;protein_id=CAL11470.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1536459	1536974	.	+	.	ID=id2581;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 247.7%2C E-value 1e-71;gbkey=misc_feature;gene=menB;inference=protein motif:PFAM:PF00378
AM286415.1	EMBL	sequence_feature	1536651	1536689	.	+	.	ID=id2582;Note=PS00018 EF-hand calcium-binding domain.;gbkey=misc_feature;gene=menB;inference=protein motif:Prosite:PS00018
AM286415.1	EMBL	sequence_feature	1536723	1536785	.	+	.	ID=id2583;Note=PS00166 Enoyl-CoA hydratase/isomerase signature.;gbkey=misc_feature;gene=menB;inference=protein motif:Prosite:PS00166
AM286415.1	EMBL	gene	1537214	1538185	.	+	.	ID=gene1377;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=YE1378
AM286415.1	EMBL	CDS	1537214	1538185	.	+	0	ID=cds1323;Parent=gene1377;Dbxref=EnsemblGenomes-Gn:YE1378,EnsemblGenomes-Tr:CAL11471,GOA:A1JKU9,InterPro:IPR001354,InterPro:IPR010196,InterPro:IPR013342,InterPro:IPR029017,InterPro:IPR029065,NCBI_GP:CAL11471.1;Name=CAL11471.1;gbkey=CDS;gene=menC;product=putative O-succinylbenzoate-CoA synthase;protein_id=CAL11471.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1537451	1537483	.	+	.	ID=id2584;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=menC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1538356	1539594	.	+	.	ID=gene1378;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=YE1379
AM286415.1	EMBL	CDS	1538356	1539594	.	+	0	ID=cds1324;Parent=gene1378;Dbxref=EnsemblGenomes-Gn:YE1379,EnsemblGenomes-Tr:CAL11472,GOA:A1JKV3,InterPro:IPR000873,InterPro:IPR010192,InterPro:IPR020845,InterPro:IPR025110,UniProtKB/TrEMBL:A1JKV3,NCBI_GP:CAL11472.1;Name=CAL11472.1;gbkey=CDS;gene=menE;product=putative O-succinylbenzoic acid--CoA ligase;protein_id=CAL11472.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1538356	1539348	.	+	.	ID=id2585;Note=Pfam match to entry PF00501 AMP-binding%2CAMP-binding enzyme%2C score 155.5%2C E-value 6.1e-44;gbkey=misc_feature;gene=menE;inference=protein motif:PFAM:PF00501
AM286415.1	EMBL	sequence_feature	1538614	1538649	.	+	.	ID=id2586;Note=PS00455 Putative AMP-binding domain signature.;gbkey=misc_feature;gene=menE;inference=protein motif:Prosite:PS00455
AM286415.1	EMBL	gene	1539790	1541232	.	-	.	ID=gene1379;Name=katA;gbkey=Gene;gene=katA;gene_biotype=protein_coding;locus_tag=YE1380
AM286415.1	EMBL	CDS	1539790	1541232	.	-	0	ID=cds1325;Parent=gene1379;Dbxref=EnsemblGenomes-Gn:YE1380,EnsemblGenomes-Tr:CAL11473,GOA:A1JKV7,InterPro:IPR010582,InterPro:IPR011614,InterPro:IPR018028,InterPro:IPR020835,InterPro:IPR024708,InterPro:IPR024711,UniProtKB/TrEMBL:A1JKV7,NCBI_GP:CAL11473.1;Name=CAL11473.1;gbkey=CDS;gene=katA;product=catalase;protein_id=CAL11473.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1540054	1541208	.	-	.	ID=id2587;Note=Pfam match to entry PF00199 catalase%2C Catalase %2Cscore 953.5%2C E-value 3.7e-284;gbkey=misc_feature;gene=katA;inference=protein motif:PFAM:PF00199
AM286415.1	EMBL	sequence_feature	1541050	1541100	.	-	.	ID=id2588;Note=PS00438 Catalase proximal active site signature.;gbkey=misc_feature;gene=katA;inference=protein motif:Prosite:PS00438
AM286415.1	EMBL	gene	1541620	1542129	.	+	.	ID=gene1380;Name=YE1381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1381
AM286415.1	EMBL	CDS	1541620	1542129	.	+	0	ID=cds1326;Parent=gene1380;Dbxref=EnsemblGenomes-Gn:YE1381,EnsemblGenomes-Tr:CAL11474,GOA:A1JKW1,InterPro:IPR009998,InterPro:IPR011250,InterPro:IPR023614,UniProtKB/TrEMBL:A1JKW1,NCBI_GP:CAL11474.1;Name=CAL11474.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11474.1;transl_table=11
AM286415.1	EMBL	gene	1542202	1543410	.	-	.	ID=gene1381;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=YE1382
AM286415.1	EMBL	CDS	1542202	1543410	.	-	0	ID=cds1327;Parent=gene1381;Dbxref=EnsemblGenomes-Gn:YE1382,EnsemblGenomes-Tr:CAL11475,GOA:A1JKW2,InterPro:IPR002091,InterPro:IPR013059,InterPro:IPR013061,InterPro:IPR018227,UniProtKB/TrEMBL:A1JKW2,NCBI_GP:CAL11475.1;Name=CAL11475.1;gbkey=CDS;gene=tyrP;product=tyrosine-specific transport protein;protein_id=CAL11475.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1543324	1543392	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1543246	1543314	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1543102	1543170	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1543000	1543059	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1542913	1542981	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1542802	1542870	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1542706	1542765	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1542526	1542594	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1542424	1542492	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1542346	1542414	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1542217	1542285	.	-	.	ID=id2589;Note=11 probable transmembrane helices predicted for YE1382 by TMHMM2.0 at aa 7-29%2C 33-55%2C 81-103%2C 118-137%2C144-166%2C 181-203%2C 216-235%2C 273-295%2C 307-329%2C 333-355 and 376-398;gbkey=misc_feature;gene=tyrP;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	1542241	1543410	.	-	.	ID=id2590;Note=Pfam match to entry PF03222 Trp_Tyr_perm%2CTryptophan/tyrosine permease family%2C score 666.3%2C E-value 1e-197;gbkey=misc_feature;gene=tyrP;inference=protein motif:PFAM:PF03222
AM286415.1	EMBL	sequence_feature	1543150	1543410	.	-	.	ID=id2591;Note=Pfam match to entry PF01490 Aa_trans%2C Transmembrane amino acid transporter protein%2C score 24.0%2C E-value 1.8e-07;gbkey=misc_feature;gene=tyrP;inference=protein motif:PFAM:PF01490
AM286415.1	EMBL	sequence_feature	1543312	1543362	.	-	.	ID=id2592;Note=PS00594 Aromatic amino acids permeases signature.;gbkey=misc_feature;gene=tyrP;inference=protein motif:Prosite:PS00594
AM286415.1	EMBL	gene	1543640	1544833	.	+	.	ID=gene1382;Name=YE1383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1383
AM286415.1	EMBL	CDS	1543640	1544833	.	+	0	ID=cds1328;Parent=gene1382;Dbxref=EnsemblGenomes-Gn:YE1383,EnsemblGenomes-Tr:CAL11476,GOA:A1JKX8,InterPro:IPR001453,InterPro:IPR008135,InterPro:IPR008136,InterPro:IPR020817,UniProtKB/TrEMBL:A1JKX8,NCBI_GP:CAL11476.1;Name=CAL11476.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11476.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1543640	1544005	.	+	.	ID=id2593;Note=Pfam match to entry PF00994 MoCF_biosynth%2C Probable molybdopterin binding domain%2C score 23.4%2C E-value 4.1e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00994
AM286415.1	EMBL	pseudogene	1545073	1545828	.	+	.	ID=gene1383;Name=YE1384;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1384;pseudo=true
AM286415.1	EMBL	CDS	1545073	1545261	.	+	0	ID=cds1329;Parent=gene1383;Dbxref=PSEUDO:CAL11477.1;Note=no significant database hits. This CDS is highly similar to YE1386 82.400 38dentity in 250 aa overlap%2CYE1387 73.200 38dentity in 250 aa overlap and YE1388 69.565 38dentity in 253 aa overlap. However this CDS caries a stop codon within the seqence following codon 63.;gbkey=CDS;product=putative exported protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1545265	1545828	.	+	0	ID=cds1329;Parent=gene1383;Dbxref=PSEUDO:CAL11477.1;Note=no significant database hits. This CDS is highly similar to YE1386 82.400 38dentity in 250 aa overlap%2CYE1387 73.200 38dentity in 250 aa overlap and YE1388 69.565 38dentity in 253 aa overlap. However this CDS caries a stop codon within the seqence following codon 63.;gbkey=CDS;product=putative exported protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1545091	1545159	.	+	.	ID=id2594;Note=1 probable transmembrane helix predicted for YE1384 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	signal_peptide	1545073	1545159	.	+	.	ID=id2595;Note=Signal peptide predicted for YE1384 by SignalP 2.0 HMM (Signal peptide probabilty 0.984) with cleavage site probability 0.983 between residues 29 and 30;gbkey=sig_peptide;pseudo=true
AM286415.1	EMBL	repeat_region	1545154	1548213	.	+	.	ID=id2596;Note=This region defines the location of four large degenerate repeats (~~750 bp) that encode three intact proteins as well as a pseudogene. All of which are highly conserved in amino acid sequence and are thought to be exported to the periplasm.;gbkey=repeat_region
AM286415.1	EMBL	gene	1545840	1546622	.	+	.	ID=gene1384;Name=YE1386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1386
AM286415.1	EMBL	CDS	1545840	1546622	.	+	0	ID=cds1330;Parent=gene1384;Dbxref=EnsemblGenomes-Gn:YE1386,EnsemblGenomes-Tr:CAL11478,UniProtKB/TrEMBL:A1JKY4,NCBI_GP:CAL11478.1;Name=CAL11478.1;Note=no significant database hits. This CDS is highly similar to YE1384 82.400 38dentity in 250 aa overlap%2CYE1387 87.692 38dentity in 260 aa overlap and YE1388 82.510 38dentity in 263 aa overlap;gbkey=CDS;product=putative exported protein;protein_id=CAL11478.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1545885	1545953	.	+	.	ID=id2597;Note=1 probable transmembrane helix predicted for YE1386 by TMHMM2.0 at aa 16-38;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1546634	1547410	.	+	.	ID=gene1385;Name=YE1387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1387
AM286415.1	EMBL	CDS	1546634	1547410	.	+	0	ID=cds1331;Parent=gene1385;Dbxref=EnsemblGenomes-Gn:YE1387,EnsemblGenomes-Tr:CAL11479,UniProtKB/TrEMBL:A1JKY9,NCBI_GP:CAL11479.1;Name=CAL11479.1;Note=no significant database hits. This CDS is highly similar to YE1384 73.200 38dentity in 250 aa overlap%2CYE1386 87.692 38dentity in 260 aa overlap and YE1388 83.908 38dentity in 261 aa overlap;gbkey=CDS;product=putative exported protein;protein_id=CAL11479.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1546679	1546747	.	+	.	ID=id2598;Note=1 probable transmembrane helix predicted for YE1387 by TMHMM2.0 at aa 16-38;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1547422	1548207	.	+	.	ID=gene1386;Name=YE1388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1388
AM286415.1	EMBL	CDS	1547422	1548207	.	+	0	ID=cds1332;Parent=gene1386;Dbxref=EnsemblGenomes-Gn:YE1388,EnsemblGenomes-Tr:CAL11480,UniProtKB/TrEMBL:A1JKZ1,NCBI_GP:CAL11480.1;Name=CAL11480.1;Note=no significant database hits. This CDS is highly similar to YE1384 69.565 38dentity in 253 aa overlap%2CYE1386 82.510 38dentity in 260 aa overlap and YE1387 83.908 38dentity in 261 aa overlap;gbkey=CDS;product=putative exported protein;protein_id=CAL11480.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1547479	1547535	.	+	.	ID=id2599;Note=1 probable transmembrane helix predicted for YE1388 by TMHMM2.0 at aa 20-38;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1548219	1553630	.	+	.	ID=gene1387;Name=YE1389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1389
AM286415.1	EMBL	CDS	1548219	1553630	.	+	0	ID=cds1333;Parent=gene1387;Dbxref=EnsemblGenomes-Gn:YE1389,EnsemblGenomes-Tr:CAL11481,GOA:A1JL74,InterPro:IPR000209,InterPro:IPR002884,InterPro:IPR008979,InterPro:IPR011049,InterPro:IPR015500,InterPro:IPR023828,UniProtKB/TrEMBL:A1JL74,NCBI_GP:CAL11481.1;Name=CAL11481.1;Note=Similar to many putative Prokaryotic and Eukaryotic serine proteases including: Branchiostoma californiensis proprotein convertase subtilisin/kexin type 5 precursor pc6 SWALL:PCK5_BRACL (SWALL:Q9NJ15) (1696 aa) fasta scores: E(): 4.7e-23%2C 30.03 38d in 536 aa%2C Anabaena sp. hypothetical protein All0364 SWALL:Q8YZU3 (EMBL:AP003582) (900 aa) fasta scores: E(): 1.3e-54%2C 34.47 38d in 847 aa%2CHydra attenuata pc3-like endoprotease variant B precursor SWALL:NECB_HYDAT (SWALL:P29145) (710 aa) fasta scores: E(): 8.5e-15%2C 28.8 38d in 493 aa and to Mus musculus proprotein convertase subtilisin/kexin type 7 precursor pcsk7 or pc7 SWALL:PCK7_MOUSE (SWALL:Q61139) (770 aa) fasta scores: E(): 2.8e-12%2C 27.16 38d in 519 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9NJ15;product=putative serine protease;protein_id=CAL11481.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1549608	1549646	.	+	.	ID=id2600;Note=PS00018 EF-hand calcium-binding domain.;gbkey=misc_feature;inference=protein motif:Prosite:PS00018
AM286415.1	EMBL	sequence_feature	1549998	1550051	.	+	.	ID=id2601;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 9.2%2C E-value 1.3;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	1550172	1550225	.	+	.	ID=id2602;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 6.6%2C E-value 2.9;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	1550256	1550309	.	+	.	ID=id2603;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 19.2%2C E-value 0.0065;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	1550310	1550363	.	+	.	ID=id2604;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 7.0%2C E-value 2.5;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	1550391	1550444	.	+	.	ID=id2605;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 23.2%2C E-value 0.0004;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	1551000	1552001	.	+	.	ID=id2606;Note=Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family%2C score 60.8%2C E-value 1.9e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF00082
AM286415.1	EMBL	sequence_feature	1551783	1551815	.	+	.	ID=id2607;Note=PS00138 Serine proteases%2C subtilase family%2C serine active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00138
AM286415.1	EMBL	sequence_feature	1551990	1552451	.	+	.	ID=id2608;Note=Pfam match to entry PF01483 P%2C Proprotein convertase P-domain%2C score 9.0%2C E-value 1.7e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF01483
AM286415.1	EMBL	sequence_feature	1552677	1552727	.	+	.	ID=id2609;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 6.2%2C E-value 3.1;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	1552731	1552784	.	+	.	ID=id2610;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 18.2%2C E-value 0.012;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	gene	1553727	1554233	.	-	.	ID=gene1388;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;gene_synonym=eti;locus_tag=YE1390
AM286415.1	EMBL	CDS	1553727	1554233	.	-	0	ID=cds1334;Parent=gene1388;Dbxref=EnsemblGenomes-Gn:YE1390,EnsemblGenomes-Tr:CAL11482,GOA:A1JL79,InterPro:IPR005658,InterPro:IPR023084,InterPro:IPR023189,InterPro:IPR027438,NCBI_GP:CAL11482.1;Name=CAL11482.1;gbkey=CDS;gene=eco;product=putative ecotin precursor;protein_id=CAL11482.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1553736	1554233	.	-	.	ID=id2611;Note=Pfam match to entry PF03974 Ecotin%2C Ecotin%2C score 286.3%2C E-value 2.5e-83;gbkey=misc_feature;gene=eco;inference=protein motif:PFAM:PF03974
AM286415.1	EMBL	gene	1554492	1554737	.	-	.	ID=gene1389;Name=YE1391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1391
AM286415.1	EMBL	CDS	1554492	1554737	.	-	0	ID=cds1335;Parent=gene1389;Dbxref=EnsemblGenomes-Gn:YE1391,EnsemblGenomes-Tr:CAL11483,GOA:A1JL83,InterPro:IPR001041,InterPro:IPR006058,InterPro:IPR012675,UniProtKB/TrEMBL:A1JL83,NCBI_GP:CAL11483.1;Name=CAL11483.1;gbkey=CDS;product=putative iron-sulphur binding protein;protein_id=CAL11483.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1554513	1554737	.	-	.	ID=id2612;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domain%2C score 38.1%2C E-value 1.3e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00111
AM286415.1	EMBL	sequence_feature	1554612	1554638	.	-	.	ID=id2613;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00197
AM286415.1	EMBL	gene	1554877	1556007	.	-	.	ID=gene1390;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;gene_synonym=ftsB;locus_tag=YE1392
AM286415.1	EMBL	CDS	1554877	1556007	.	-	0	ID=cds1336;Parent=gene1390;Dbxref=EnsemblGenomes-Gn:YE1392,EnsemblGenomes-Tr:CAL11484,GOA:A1JL85,InterPro:IPR000358,InterPro:IPR009078,InterPro:IPR012348,UniProtKB/TrEMBL:A1JL85,NCBI_GP:CAL11484.1;Name=CAL11484.1;gbkey=CDS;gene=nrdB;product=ribonucleoside-diphosphate reductase 1 beta chain;protein_id=CAL11484.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1554991	1555962	.	-	.	ID=id2614;Note=Pfam match to entry PF00268 ribonuc_red_sm%2CRibonucleotide reductase%2C small chain%2C score 485.2%2CE-value 3.4e-143;gbkey=misc_feature;gene=nrdB;inference=protein motif:PFAM:PF00268
AM286415.1	EMBL	sequence_feature	1555615	1555665	.	-	.	ID=id2615;Note=PS00368 Ribonucleotide reductase small subunit signature.;gbkey=misc_feature;gene=nrdB;inference=protein motif:Prosite:PS00368
AM286415.1	EMBL	gene	1556093	1558378	.	-	.	ID=gene1391;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;gene_synonym=dnaF;locus_tag=YE1393
AM286415.1	EMBL	CDS	1556093	1558378	.	-	0	ID=cds1337;Parent=gene1391;Dbxref=EnsemblGenomes-Gn:YE1393,EnsemblGenomes-Tr:CAL11485,GOA:A1JL92,InterPro:IPR000788,InterPro:IPR005144,InterPro:IPR008926,InterPro:IPR013346,InterPro:IPR013509,UniProtKB/TrEMBL:A1JL92,NCBI_GP:CAL11485.1;Name=CAL11485.1;gbkey=CDS;gene=nrdA;product=ribonucleoside-diphosphate reductase 1 alpha chain;protein_id=CAL11485.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1556171	1557715	.	-	.	ID=id2616;Note=Pfam match to entry PF02867 ribonuc_red_lgC%2CRibonucleotide reductase%2C barrel domain%2C score 883.1%2CE-value 5.6e-263;gbkey=misc_feature;gene=nrdA;inference=protein motif:PFAM:PF02867
AM286415.1	EMBL	sequence_feature	1556516	1556584	.	-	.	ID=id2617;Note=PS00089 Ribonucleotide reductase large subunit signature.;gbkey=misc_feature;gene=nrdA;inference=protein motif:Prosite:PS00089
AM286415.1	EMBL	sequence_feature	1557719	1557958	.	-	.	ID=id2618;Note=Pfam match to entry PF00317 ribonuc_red_lg%2CRibonucleotide reductase%2C all-alpha domain%2C score 90.1%2CE-value 2.8e-24;gbkey=misc_feature;gene=nrdA;inference=protein motif:PFAM:PF00317
AM286415.1	EMBL	sequence_feature	1557842	1557874	.	-	.	ID=id2619;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nrdA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1558097	1558366	.	-	.	ID=id2620;Note=Pfam match to entry PF03477 ATP-cone%2C ATP cone domain%2C score 82.4%2C E-value 5.8e-22;gbkey=misc_feature;gene=nrdA;inference=protein motif:PFAM:PF03477
AM286415.1	EMBL	gene	1558895	1559623	.	-	.	ID=gene1392;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;gene_synonym=pufX;locus_tag=YE1394
AM286415.1	EMBL	CDS	1558895	1559623	.	-	0	ID=cds1338;Parent=gene1392;Dbxref=EnsemblGenomes-Gn:YE1394,EnsemblGenomes-Tr:CAL11486,GOA:A1JLA0,InterPro:IPR010233,InterPro:IPR029063,NCBI_GP:CAL11486.1;Name=CAL11486.1;gbkey=CDS;gene=ubiG;product=3-demethylubiquinone-9 3-methyltransferase;protein_id=CAL11486.1;transl_table=11
AM286415.1	EMBL	gene	1559825	1562482	.	+	.	ID=gene1393;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;gene_synonym=hisW,nalA,parD;locus_tag=YE1395
AM286415.1	EMBL	CDS	1559825	1562482	.	+	0	ID=cds1339;Parent=gene1393;Dbxref=EnsemblGenomes-Gn:YE1395,EnsemblGenomes-Tr:CAL11487,GOA:A1JLA2,InterPro:IPR002205,InterPro:IPR005743,InterPro:IPR006691,InterPro:IPR013757,InterPro:IPR013758,InterPro:IPR013760,InterPro:IPR024946,UniProtKB/TrEMBL:A1JLA2,NCBI_GP:CAL11487.1;Name=CAL11487.1;gbkey=CDS;gene=gyrA;product=DNA gyrase subunit A;protein_id=CAL11487.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1559918	1561366	.	+	.	ID=id2621;Note=Pfam match to entry PF00521 DNA_topoisoIV%2C DNA gyrase/topoisomerase IV%2C subunit A%2C score 1078.2%2C E-value 0;gbkey=misc_feature;gene=gyrA;inference=protein motif:PFAM:PF00521
AM286415.1	EMBL	sequence_feature	1561433	1561582	.	+	.	ID=id2622;Note=Pfam match to entry PF03989 DNA_gyraseA_C%2C DNA gyrase C-terminal domain%2C beta-propeller%2C score 55.6%2CE-value 7.2e-14;gbkey=misc_feature;gene=gyrA;inference=protein motif:PFAM:PF03989
AM286415.1	EMBL	sequence_feature	1561583	1561741	.	+	.	ID=id2623;Note=Pfam match to entry PF03989 DNA_gyraseA_C%2C DNA gyrase C-terminal domain%2C beta-propeller%2C score 61.5%2CE-value 1.1e-15;gbkey=misc_feature;gene=gyrA;inference=protein motif:PFAM:PF03989
AM286415.1	EMBL	sequence_feature	1561751	1561894	.	+	.	ID=id2624;Note=Pfam match to entry PF03989 DNA_gyraseA_C%2C DNA gyrase C-terminal domain%2C beta-propeller%2C score 48.6%2CE-value 9.3e-12;gbkey=misc_feature;gene=gyrA;inference=protein motif:PFAM:PF03989
AM286415.1	EMBL	sequence_feature	1561895	1562044	.	+	.	ID=id2625;Note=Pfam match to entry PF03989 DNA_gyraseA_C%2C DNA gyrase C-terminal domain%2C beta-propeller%2C score 65.5%2CE-value 7.3e-17;gbkey=misc_feature;gene=gyrA;inference=protein motif:PFAM:PF03989
AM286415.1	EMBL	sequence_feature	1562045	1562197	.	+	.	ID=id2626;Note=Pfam match to entry PF03989 DNA_gyraseA_C%2C DNA gyrase C-terminal domain%2C beta-propeller%2C score 63.1%2CE-value 3.8e-16;gbkey=misc_feature;gene=gyrA;inference=protein motif:PFAM:PF03989
AM286415.1	EMBL	sequence_feature	1562198	1562347	.	+	.	ID=id2627;Note=Pfam match to entry PF03989 DNA_gyraseA_C%2C DNA gyrase C-terminal domain%2C beta-propeller%2C score 62.2%2CE-value 7.5e-16;gbkey=misc_feature;gene=gyrA;inference=protein motif:PFAM:PF03989
AM286415.1	EMBL	gene	1562600	1565467	.	+	.	ID=gene1394;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=YE1396
AM286415.1	EMBL	CDS	1562600	1565467	.	+	0	ID=cds1340;Parent=gene1394;Dbxref=EnsemblGenomes-Gn:YE1396,EnsemblGenomes-Tr:CAL11488,GOA:A1JLB1,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR011006,InterPro:IPR019017,UniProtKB/TrEMBL:A1JLB1,NCBI_GP:CAL11488.1;Name=CAL11488.1;gbkey=CDS;gene=rcsC;product=two component sensor kinase/response regulator protein RcsC;protein_id=CAL11488.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1562657	1562725	.	+	.	ID=id2628;Note=2 probable transmembrane helices predicted for YE1396 by TMHMM2.0 at aa 20-42 and 316-338;gbkey=misc_feature;gene=rcsC;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1563545	1563613	.	+	.	ID=id2628;Note=2 probable transmembrane helices predicted for YE1396 by TMHMM2.0 at aa 20-42 and 316-338;gbkey=misc_feature;gene=rcsC;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	1564010	1564207	.	+	.	ID=id2629;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 81.7%2C E-value 9.7e-22;gbkey=misc_feature;gene=rcsC;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	1564346	1564678	.	+	.	ID=id2630;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 141.9%2C E-value 7.3e-40;gbkey=misc_feature;gene=rcsC;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	1565096	1565455	.	+	.	ID=id2631;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 136.3%2C E-value 3.5e-38;gbkey=misc_feature;gene=rcsC;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	1565655	1566302	.	-	.	ID=gene1395;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=YE1397
AM286415.1	EMBL	CDS	1565655	1566302	.	-	0	ID=cds1341;Parent=gene1395;Dbxref=EnsemblGenomes-Gn:YE1397,EnsemblGenomes-Tr:CAL11489,GOA:A1JLB7,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JLB7,NCBI_GP:CAL11489.1;Name=CAL11489.1;gbkey=CDS;gene=rcsB;product=probable two component response regulator component B;protein_id=CAL11489.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1565664	1565861	.	-	.	ID=id2632;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 76.8%2C E-value 2.9e-20;gbkey=misc_feature;gene=rcsB;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	1565727	1565810	.	-	.	ID=id2633;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=rcsB;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	sequence_feature	1565742	1565807	.	-	.	ID=id2634;Note=Predicted helix-turn-helix motif with score 1127.000%2C SD 3.03 at aa 166-187%2C sequence FLVTEIARKLNRSIKTISSQKK;gbkey=misc_feature;gene=rcsB
AM286415.1	EMBL	sequence_feature	1565919	1566293	.	-	.	ID=id2635;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 115.0%2C E-value 9e-32;gbkey=misc_feature;gene=rcsB;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	1566305	1568998	.	-	.	ID=gene1396;Name=YE1398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1398
AM286415.1	EMBL	CDS	1566305	1568998	.	-	0	ID=cds1342;Parent=gene1396;Dbxref=EnsemblGenomes-Gn:YE1398,EnsemblGenomes-Tr:CAL11490,GOA:A1JLC2,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR005467,InterPro:IPR008207,InterPro:IPR009082,UniProtKB/TrEMBL:A1JLC2,NCBI_GP:CAL11490.1;Name=CAL11490.1;Note=Similar to Salmonella typhimurium sensor protein RcsC or Stm2271 SWALL:RCSC_SALTY (SWALL:P58662) (948 aa) fasta scores: E(): 1.6e-21%2C 21.72 38d in 755 aa%2C and to Salmonella typhimurium putative regulator YojN SWALL:Q9X6X6 (EMBL:AF153717) (889 aa) fasta scores: E(): 3.8e-153%2C 47.99 38d in 896 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P58662;product=putative two component sensor kinase;protein_id=CAL11490.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1566314	1566574	.	-	.	ID=id2636;Note=Pfam match to entry PF01627 Hpt%2C Hpt domain%2C score -14.9%2C E-value 0.0051;gbkey=misc_feature;inference=protein motif:PFAM:PF01627
AM286415.1	EMBL	sequence_feature	1566977	1567315	.	-	.	ID=id2637;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 62.3%2C E-value 6.6e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	1567454	1567651	.	-	.	ID=id2638;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 35.1%2C E-value 1e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	1568894	1568962	.	-	.	ID=id2639;Note=2 probable transmembrane helices predicted for YE1398 by TMHMM2.0 at aa 13-35 and 302-324;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1568027	1568095	.	-	.	ID=id2639;Note=2 probable transmembrane helices predicted for YE1398 by TMHMM2.0 at aa 13-35 and 302-324;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	1569021	1570175	.	-	.	ID=gene1397;Name=YE1399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1399
AM286415.1	EMBL	CDS	1569021	1570175	.	-	0	ID=cds1343;Parent=gene1397;Dbxref=EnsemblGenomes-Gn:YE1399,EnsemblGenomes-Tr:CAL11491,GOA:A1JLD3,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JLD3,NCBI_GP:CAL11491.1;Name=CAL11491.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11491.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1570062	1570115	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1569951	1570019	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1569864	1569932	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1569783	1569851	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1569681	1569749	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1569603	1569671	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1569510	1569569	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1569384	1569452	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1569294	1569350	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1569216	1569284	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1569111	1569179	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1569030	1569098	.	-	.	ID=id2640;Note=12 probable transmembrane helices predicted for YE1399 by TMHMM2.0 at aa 21-38%2C 53-75%2C 82-104%2C 109-131%2C143-165%2C 169-191%2C 203-222%2C 242-264%2C 276-294%2C 298-320%2C333-355 and 360-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	1569075	1569107	.	-	.	ID=id2641;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	pseudogene	1570728	1571242	.	+	.	ID=gene1398;Name=YE1400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1400;pseudo=true
AM286415.1	EMBL	CDS	1570728	1570841	.	+	0	ID=cds1344;Parent=gene1398;Note=Similar in parts to many type I secretion proteins including: Bordetella pertussis CyaD protein SWALL:CYAD_BORPE (SWALL:P11091) (440 aa) fasta scores: E(): 4.2e-08%2C 33.1 38d in 145 aa%2C Salmonella typhi putative type I secretion protein sty2878 SWALL:Q8Z4H8 (EMBL:AL627276) (387 aa) fasta scores: E(): 2.5e-27%2C52.53 38d in 158 aa and to Agrobacterium tumefaciens HlyD family secretion protein PrsE or atu2706 or agr_c_4904 SWALL:Q8UBZ2 (EMBL:AE009216) (437 aa) fasta scores: E(): 3.3e-09%2C 37.4 38d in 131 aa. Note this CDS has undergone extensive deletion and mutation events.;gbkey=CDS;inference=similar to sequence:UniProtKB:P11091;product=Putative type I secretion protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1570847	1571176	.	+	0	ID=cds1344;Parent=gene1398;Note=Similar in parts to many type I secretion proteins including: Bordetella pertussis CyaD protein SWALL:CYAD_BORPE (SWALL:P11091) (440 aa) fasta scores: E(): 4.2e-08%2C 33.1 38d in 145 aa%2C Salmonella typhi putative type I secretion protein sty2878 SWALL:Q8Z4H8 (EMBL:AL627276) (387 aa) fasta scores: E(): 2.5e-27%2C52.53 38d in 158 aa and to Agrobacterium tumefaciens HlyD family secretion protein PrsE or atu2706 or agr_c_4904 SWALL:Q8UBZ2 (EMBL:AE009216) (437 aa) fasta scores: E(): 3.3e-09%2C 37.4 38d in 131 aa. Note this CDS has undergone extensive deletion and mutation events.;gbkey=CDS;inference=similar to sequence:UniProtKB:P11091;product=Putative type I secretion protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1571180	1571242	.	+	0	ID=cds1344;Parent=gene1398;Note=Similar in parts to many type I secretion proteins including: Bordetella pertussis CyaD protein SWALL:CYAD_BORPE (SWALL:P11091) (440 aa) fasta scores: E(): 4.2e-08%2C 33.1 38d in 145 aa%2C Salmonella typhi putative type I secretion protein sty2878 SWALL:Q8Z4H8 (EMBL:AL627276) (387 aa) fasta scores: E(): 2.5e-27%2C52.53 38d in 158 aa and to Agrobacterium tumefaciens HlyD family secretion protein PrsE or atu2706 or agr_c_4904 SWALL:Q8UBZ2 (EMBL:AE009216) (437 aa) fasta scores: E(): 3.3e-09%2C 37.4 38d in 131 aa. Note this CDS has undergone extensive deletion and mutation events.;gbkey=CDS;inference=similar to sequence:UniProtKB:P11091;product=Putative type I secretion protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	1571499	1571589	.	-	.	ID=gene1399;Name=micF;gbkey=Gene;gene=micF;gene_biotype=misc_RNA
AM286415.1	EMBL	transcript	1571499	1571589	.	-	.	ID=rna67;Parent=gene1399;Note=MicF RNA (RF00033) as predicted by Rfam%2C score 34.54%2C positions 1 to 94;gbkey=misc_RNA;gene=micF
AM286415.1	EMBL	exon	1571499	1571589	.	-	.	ID=id2642;Parent=rna67;Note=MicF RNA (RF00033) as predicted by Rfam%2C score 34.54%2C positions 1 to 94;gbkey=misc_RNA;gene=micF
AM286415.1	EMBL	gene	1571842	1573016	.	+	.	ID=gene1400;Name=meoA;end_range=1573016,.;gbkey=Gene;gene=meoA;gene_biotype=protein_coding;gene_synonym=ompC,par;locus_tag=YE1401;partial=true
AM286415.1	EMBL	mRNA	1571842	1573016	.	+	.	ID=rna68;Parent=gene1400;end_range=1573016,.;gbkey=mRNA;gene=meoA;partial=true
AM286415.1	EMBL	exon	1571842	1573016	.	+	.	ID=id2643;Parent=rna68;end_range=1573016,.;gbkey=mRNA;gene=meoA;partial=true
AM286415.1	EMBL	CDS	1571913	1573016	.	+	0	ID=cds1345;Parent=rna68;Dbxref=EnsemblGenomes-Gn:YE1401,EnsemblGenomes-Tr:CAL11493,GOA:A1JLE1,InterPro:IPR001702,InterPro:IPR001897,InterPro:IPR013793,InterPro:IPR023614,UniProtKB/TrEMBL:A1JLE1,NCBI_GP:CAL11493.1;Name=CAL11493.1;gbkey=CDS;gene=meoA;product=outer membrane protein C%2C porin;protein_id=CAL11493.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1571991	1573013	.	+	.	ID=id2644;Note=Pfam match to entry PF00267 Gram-ve_porins%2CGram-negative porin%2C score 682.9%2C E-value 1.1e-202;gbkey=misc_feature;gene=meoA;inference=protein motif:PFAM:PF00267
AM286415.1	EMBL	sequence_feature	1572867	1572917	.	+	.	ID=id2645;Note=PS00576 General diffusion Gram-negative porins signature.;gbkey=misc_feature;gene=meoA;inference=protein motif:Prosite:PS00576
AM286415.1	EMBL	five_prime_UTR	1571842	1571912	.	+	.	ID=id2646;gbkey=5'UTR;gene=meoA
AM286415.1	EMBL	gene	1573270	1573357	.	+	.	ID=gene1401;Name=tRNA-Ser (TGA);gbkey=Gene;gene=tRNA-Ser (TGA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1573270	1573357	.	+	.	ID=rna69;Parent=gene1401;gbkey=tRNA;gene=tRNA-Ser (TGA);product=tRNA-Ser
AM286415.1	EMBL	exon	1573270	1573357	.	+	.	ID=id2647;Parent=rna69;gbkey=tRNA;gene=tRNA-Ser (TGA);product=tRNA-Ser
AM286415.1	EMBL	gene	1573364	1573439	.	+	.	ID=gene1402;Name=tRNA-Thr (TGT);gbkey=Gene;gene=tRNA-Thr (TGT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1573364	1573439	.	+	.	ID=rna70;Parent=gene1402;gbkey=tRNA;gene=tRNA-Thr (TGT);product=tRNA-Thr
AM286415.1	EMBL	exon	1573364	1573439	.	+	.	ID=id2648;Parent=rna70;gbkey=tRNA;gene=tRNA-Thr (TGT);product=tRNA-Thr
AM286415.1	EMBL	gene	1573531	1574673	.	-	.	ID=gene1403;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=YE1402
AM286415.1	EMBL	CDS	1573531	1574673	.	-	0	ID=cds1346;Parent=gene1403;Dbxref=EnsemblGenomes-Gn:YE1402,EnsemblGenomes-Tr:CAL11494,InterPro:IPR001466,InterPro:IPR012338,UniProtKB/TrEMBL:A1JLE8,NCBI_GP:CAL11494.1;Name=CAL11494.1;gbkey=CDS;gene=ampH;product=putative penicillin-binding protein;protein_id=CAL11494.1;transl_table=11
AM286415.1	EMBL	gene	1574853	1576325	.	-	.	ID=gene1404;Name=YE1403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1403
AM286415.1	EMBL	CDS	1574853	1576325	.	-	0	ID=cds1347;Parent=gene1404;Dbxref=EnsemblGenomes-Gn:YE1403,EnsemblGenomes-Tr:CAL11495,InterPro:IPR016196,UniProtKB/TrEMBL:A1JLF2,NCBI_GP:CAL11495.1;Name=CAL11495.1;gbkey=CDS;product=putative transport protein;protein_id=CAL11495.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1576215	1576283	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1576074	1576127	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1575993	1576061	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1575864	1575932	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1575783	1575851	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1575588	1575656	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1575477	1575545	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1575396	1575464	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1575318	1575386	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1575189	1575257	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1575063	1575131	.	-	.	ID=id2649;Note=11 probable transmembrane helices predicted for YE1403 by TMHMM2.0 at aa 15-37%2C 67-84%2C 89-111%2C 132-154%2C159-181%2C 224-246%2C 261-283%2C 288-310%2C 314-336%2C 357-379 and 399-421;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	1576769	1577782	.	+	.	ID=gene1405;Name=YE1404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1404
AM286415.1	EMBL	CDS	1576769	1577782	.	+	0	ID=cds1348;Parent=gene1405;Dbxref=EnsemblGenomes-Gn:YE1404,EnsemblGenomes-Tr:CAL11496,GOA:A1JLF6,InterPro:IPR001279,InterPro:IPR024884,UniProtKB/TrEMBL:A1JLF6,NCBI_GP:CAL11496.1;Name=CAL11496.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11496.1;transl_table=11
AM286415.1	EMBL	gene	1577852	1579639	.	-	.	ID=gene1406;Name=tsr2;gbkey=Gene;gene=tsr2;gene_biotype=protein_coding;gene_synonym=cheD2;locus_tag=YE1405
AM286415.1	EMBL	CDS	1577852	1579639	.	-	0	ID=cds1349;Parent=gene1406;Dbxref=EnsemblGenomes-Gn:YE1405,EnsemblGenomes-Tr:CAL11497,GOA:A1JLF9,InterPro:IPR003660,InterPro:IPR004010,InterPro:IPR004089,InterPro:IPR004090,InterPro:IPR029151,UniProtKB/TrEMBL:A1JLF9,NCBI_GP:CAL11497.1;Name=CAL11497.1;gbkey=CDS;gene=tsr2;product=putative methyl-accepting chemotaxis protein;protein_id=CAL11497.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1577855	1578550	.	-	.	ID=id2650;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 309.9%2C E-value 2e-90;gbkey=misc_feature;gene=tsr2;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	sequence_feature	1578611	1578823	.	-	.	ID=id2651;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 68.7%2C E-value 7.8e-18;gbkey=misc_feature;gene=tsr2;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	1579559	1579627	.	-	.	ID=id2652;Note=2 probable transmembrane helices predicted for YE1405 by TMHMM2.0 at aa 5-27 and 268-290;gbkey=misc_feature;gene=tsr2;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1578770	1578838	.	-	.	ID=id2652;Note=2 probable transmembrane helices predicted for YE1405 by TMHMM2.0 at aa 5-27 and 268-290;gbkey=misc_feature;gene=tsr2;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	1579001	1579240	.	-	.	ID=id2653;Note=Pfam match to entry PF02743 Cache%2C Cache domain %2Cscore 77.8%2C E-value 1.5e-20;gbkey=misc_feature;gene=tsr2;inference=protein motif:PFAM:PF02743
AM286415.1	EMBL	pseudogene	1579969	1580899	.	-	.	ID=gene1407;Name=YE1406;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1406;pseudo=true
AM286415.1	EMBL	CDS	1580588	1580899	.	-	0	ID=cds1350;Parent=gene1407;Note=Similar to many including: Yersinia pestis coagulase/fibrinolysin precursor Pla or Yppcp1.07 SWALL:COLY_YERPE (SWALL:P17811) (312 aa) fasta scores: E(): 2.4e-56%2C 47.74 38d in 310 aa%2C and to Yersinia pestis putative outer membrane-associated protease Pla2 or Ypo1231 SWALL:Q8ZGQ6 (EMBL:AJ414147) (311 aa) fasta scores: E(): 1.2e-75%2C 60.38 38d in 313 aa%2C and to Salmonella typhimurium outer membrane protease E precursor PgtE or PrtA or stm2395 SWALL:PGTE_SALTY (SWALL:P06185) (312 aa) fasta scores: E(): 8.6e-53%2C 46.12 38d in 310 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P17811;product=putative protease (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1579969	1580583	.	-	0	ID=cds1350;Parent=gene1407;Note=Similar to many including: Yersinia pestis coagulase/fibrinolysin precursor Pla or Yppcp1.07 SWALL:COLY_YERPE (SWALL:P17811) (312 aa) fasta scores: E(): 2.4e-56%2C 47.74 38d in 310 aa%2C and to Yersinia pestis putative outer membrane-associated protease Pla2 or Ypo1231 SWALL:Q8ZGQ6 (EMBL:AJ414147) (311 aa) fasta scores: E(): 1.2e-75%2C 60.38 38d in 313 aa%2C and to Salmonella typhimurium outer membrane protease E precursor PgtE or PrtA or stm2395 SWALL:PGTE_SALTY (SWALL:P06185) (312 aa) fasta scores: E(): 8.6e-53%2C 46.12 38d in 310 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P17811;product=putative protease (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1580047	1580133	.	-	.	ID=id2654;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	sequence_feature	1580065	1580592	.	-	.	ID=id2655;Note=Pfam match to entry PF01278 Omptin%2C Omptin family %2Cscore 106.8%2C E-value 2.8e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF01278
AM286415.1	EMBL	sequence_feature	1580588	1580899	.	-	.	ID=id2656;Note=Pfam match to entry PF01278 Omptin%2C Omptin family %2Cscore 86.8%2C E-value 4e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF01278
AM286415.1	EMBL	signal_peptide	1580825	1580899	.	-	.	ID=id2657;Note=Signal peptide predicted for YE1407 by SignalP 2.0 HMM (Signal peptide probabilty 0.962) with cleavage site probability 0.754 between residues 25 and 26;gbkey=sig_peptide
AM286415.1	EMBL	gene	1581064	1581306	.	-	.	ID=gene1408;Name=msgA;gbkey=Gene;gene=msgA;gene_biotype=protein_coding;gene_synonym=dinI;locus_tag=YE1408
AM286415.1	EMBL	CDS	1581064	1581306	.	-	0	ID=cds1351;Parent=gene1408;Dbxref=EnsemblGenomes-Gn:YE1408,EnsemblGenomes-Tr:CAL11499,InterPro:IPR010391,UniProtKB/TrEMBL:A1JLH4,NCBI_GP:CAL11499.1;Name=CAL11499.1;gbkey=CDS;gene=msgA;product=putative stress response protein;protein_id=CAL11499.1;transl_table=11
AM286415.1	EMBL	gene	1581739	1582461	.	-	.	ID=gene1409;Name=YE1409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1409
AM286415.1	EMBL	CDS	1581739	1582461	.	-	0	ID=cds1352;Parent=gene1409;Dbxref=EnsemblGenomes-Gn:YE1409,EnsemblGenomes-Tr:CAL11500,GOA:A1JLH6,InterPro:IPR001387,InterPro:IPR010982,InterPro:IPR015927,InterPro:IPR019759,InterPro:IPR028360,UniProtKB/TrEMBL:A1JLH6,NCBI_GP:CAL11500.1;Name=CAL11500.1;gbkey=CDS;product=putative prophage repressor protein;protein_id=CAL11500.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1581787	1582137	.	-	.	ID=id2658;Note=Pfam match to entry PF00717 Peptidase_S24%2CPeptidase family S24%2C score 145.9%2C E-value 4.6e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF00717
AM286415.1	EMBL	sequence_feature	1582237	1582404	.	-	.	ID=id2659;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 42.8%2C E-value 5.2e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	1582309	1582374	.	-	.	ID=id2660;Note=Predicted helix-turn-helix motif with score 1936.000%2C SD 5.78 at aa 30-51%2C sequence ISQESVAHELGVGQSAVNQFLN;gbkey=misc_feature
AM286415.1	EMBL	gene	1582736	1583215	.	+	.	ID=gene1410;Name=YE1410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1410
AM286415.1	EMBL	CDS	1582736	1583215	.	+	0	ID=cds1353;Parent=gene1410;Dbxref=EnsemblGenomes-Gn:YE1410,EnsemblGenomes-Tr:CAL11501,GOA:A1JLI0,InterPro:IPR010534,UniProtKB/TrEMBL:A1JLI0,NCBI_GP:CAL11501.1;Name=CAL11501.1;gbkey=CDS;product=probable phage antitermination protein Q;protein_id=CAL11501.1;transl_table=11
AM286415.1	EMBL	gene	1583325	1583603	.	+	.	ID=gene1411;Name=YE1411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1411
AM286415.1	EMBL	CDS	1583325	1583603	.	+	0	ID=cds1354;Parent=gene1411;Dbxref=EnsemblGenomes-Gn:YE1411,EnsemblGenomes-Tr:CAL11502,UniProtKB/TrEMBL:A1JLI1,NCBI_GP:CAL11502.1;Name=CAL11502.1;gbkey=CDS;product=putative bacteriophage protein;protein_id=CAL11502.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1583367	1583435	.	+	.	ID=id2661;Note=1 probable transmembrane helix predicted for YE1411 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	repeat_region	1583600	1584249	.	+	.	ID=id2662;Note=defunct IS285 Insertion sequence element.;gbkey=repeat_region
AM286415.1	EMBL	pseudogene	1583600	1583956	.	+	.	ID=gene1412;Name=YE1412;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE1412;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	1583959	1584236	.	+	.	ID=gene1412;Name=YE1412;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE1412;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	1583600	1583956	.	+	0	ID=cds1355;Parent=gene1412;Dbxref=PSEUDO:CAL11503.1;Note=Similar to Yersinia pestis IS285 transposase SWALL:O68779 (EMBL:AF053947) (402 aa) fasta scores: E(): 2.6e-38%2C 53.05 38d in 360 aa. Note this CDS has been subject to extensive deletion/frameshift events.;gbkey=CDS;inference=similar to sequence:INSDC:AF053947;product=transposase for insertion element IS285 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1583959	1584180	.	+	0	ID=cds1355;Parent=gene1412;Dbxref=PSEUDO:CAL11503.1;Note=Similar to Yersinia pestis IS285 transposase SWALL:O68779 (EMBL:AF053947) (402 aa) fasta scores: E(): 2.6e-38%2C 53.05 38d in 360 aa. Note this CDS has been subject to extensive deletion/frameshift events.;gbkey=CDS;inference=similar to sequence:INSDC:AF053947;product=transposase for insertion element IS285 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1584180	1584236	.	+	0	ID=cds1355;Parent=gene1412;Dbxref=PSEUDO:CAL11503.1;Note=Similar to Yersinia pestis IS285 transposase SWALL:O68779 (EMBL:AF053947) (402 aa) fasta scores: E(): 2.6e-38%2C 53.05 38d in 360 aa. Note this CDS has been subject to extensive deletion/frameshift events.;gbkey=CDS;inference=similar to sequence:INSDC:AF053947;product=transposase for insertion element IS285 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1583783	1583959	.	+	.	ID=id2663;Note=Pfam match to entry PF00872 Transpo_mutator%2CTransposase%2C Mutator family%2C score 55.3%2C E-value 5.3e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00872
AM286415.1	EMBL	repeat_region	1584357	1585660	.	+	.	ID=id2664;Note=IS1330;gbkey=repeat_region
AM286415.1	EMBL	gene	1584441	1585634	.	+	.	ID=gene1413;Name=tpn1330;gbkey=Gene;gene=tpn1330;gene_biotype=protein_coding;locus_tag=YE1414
AM286415.1	EMBL	CDS	1584441	1585634	.	+	0	ID=cds1356;Parent=gene1413;Dbxref=EnsemblGenomes-Gn:YE1414,EnsemblGenomes-Tr:CAL11504,GOA:A1JLJ0,InterPro:IPR002559,InterPro:IPR012337,UniProtKB/TrEMBL:A1JLJ0,NCBI_GP:CAL11504.1;Name=CAL11504.1;Note=Previously sequenced as Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:Q8RSF5 (EMBL:AJ344215) (397 aa) fasta scores: E(): 2e-162%2C 98.74 id in 397 aa. Also similar to Shigella flexneri%2C and Shigella flexneri 2A IS10 orf S0034 or Cp0027 SWALL:Q9AFX7 (EMBL:AF348706) (407 aa) fasta scores: E(): 8.6e-114%2C68.51 38d in 397 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330;protein_id=CAL11504.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1584711	1585430	.	+	.	ID=id2665;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 52.2%2C E-value 7.5e-13;gbkey=misc_feature;gene=tpn1330;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	gene	1585808	1586548	.	+	.	ID=gene1414;Name=YE1415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1415
AM286415.1	EMBL	CDS	1585808	1586548	.	+	0	ID=cds1357;Parent=gene1414;Dbxref=EnsemblGenomes-Gn:YE1415,EnsemblGenomes-Tr:CAL11505,GOA:A1JLJ3,InterPro:IPR000281,InterPro:IPR001347,InterPro:IPR009057,InterPro:IPR011991,UniProtKB/TrEMBL:A1JLJ3,NCBI_GP:CAL11505.1;Name=CAL11505.1;gbkey=CDS;product=putative LacI-family regulatory protein;protein_id=CAL11505.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1585808	1586131	.	+	.	ID=id2666;Note=Pfam match to entry PF01418 HTH_6%2C Helix-turn-helix domain%2C rpiR family%2C score 26.0%2C E-value 4.5e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF01418
AM286415.1	EMBL	sequence_feature	1585898	1585963	.	+	.	ID=id2667;Note=Predicted helix-turn-helix motif with score 1846.000%2C SD 5.47 at aa 31-52%2C sequence MTIRELADAAGVSTTTVLRFCK;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1585904	1585960	.	+	.	ID=id2668;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	sequence_feature	1586120	1586515	.	+	.	ID=id2669;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 45.6%2C E-value 7e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	gene	1586713	1588254	.	+	.	ID=gene1415;Name=YE1416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1416
AM286415.1	EMBL	CDS	1586713	1588254	.	+	0	ID=cds1358;Parent=gene1415;Dbxref=EnsemblGenomes-Gn:YE1416,EnsemblGenomes-Tr:CAL11506,GOA:A1JLK5,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR013013,InterPro:IPR018113,UniProtKB/TrEMBL:A1JLK5,NCBI_GP:CAL11506.1;Name=CAL11506.1;Note=Similar to Erwinia chrysanthemi PTS system%2Cbeta-glucoside-specific IIabc component ArbF SWALL:PTBA_ERWCH (SWALL:P26207) (631 aa) fasta scores: E(): 5.8e-33%2C 36.24 38d in 516 aa%2C and to Lactobacillus plantarum permease BglP SWALL:Q9L461 (EMBL:AJ250202) (577 aa) fasta scores: E(): 3.9e-41%2C 39.22 38d in 515 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P26207;product=Putative PTS-system permease;protein_id=CAL11506.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1586737	1586841	.	+	.	ID=id2670;Note=Pfam match to entry PF00367 PTS_EIIB%2Cphosphotransferase system%2C EIIB%2C score 53.1%2C E-value 4.1e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00367
AM286415.1	EMBL	sequence_feature	1586773	1586826	.	+	.	ID=id2671;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01035
AM286415.1	EMBL	sequence_feature	1587025	1587990	.	+	.	ID=id2672;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 91.8%2C E-value 8.7e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	sequence_feature	1587040	1587108	.	+	.	ID=id2673;Note=9 probable transmembrane helices predicted for YE1416 by TMHMM2.0 at aa 110-132%2C 142-164%2C 243-265%2C280-302%2C 323-345%2C 360-382%2C 389-411%2C 431-453 and 462-484;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	1587136	1587204	.	+	.	ID=id2673;Note=9 probable transmembrane helices predicted for YE1416 by TMHMM2.0 at aa 110-132%2C 142-164%2C 243-265%2C280-302%2C 323-345%2C 360-382%2C 389-411%2C 431-453 and 462-484;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	1587439	1587507	.	+	.	ID=id2673;Note=9 probable transmembrane helices predicted for YE1416 by TMHMM2.0 at aa 110-132%2C 142-164%2C 243-265%2C280-302%2C 323-345%2C 360-382%2C 389-411%2C 431-453 and 462-484;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	1587550	1587618	.	+	.	ID=id2673;Note=9 probable transmembrane helices predicted for YE1416 by TMHMM2.0 at aa 110-132%2C 142-164%2C 243-265%2C280-302%2C 323-345%2C 360-382%2C 389-411%2C 431-453 and 462-484;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	1587679	1587747	.	+	.	ID=id2673;Note=9 probable transmembrane helices predicted for YE1416 by TMHMM2.0 at aa 110-132%2C 142-164%2C 243-265%2C280-302%2C 323-345%2C 360-382%2C 389-411%2C 431-453 and 462-484;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	1587790	1587858	.	+	.	ID=id2673;Note=9 probable transmembrane helices predicted for YE1416 by TMHMM2.0 at aa 110-132%2C 142-164%2C 243-265%2C280-302%2C 323-345%2C 360-382%2C 389-411%2C 431-453 and 462-484;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	1587877	1587945	.	+	.	ID=id2673;Note=9 probable transmembrane helices predicted for YE1416 by TMHMM2.0 at aa 110-132%2C 142-164%2C 243-265%2C280-302%2C 323-345%2C 360-382%2C 389-411%2C 431-453 and 462-484;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	1588003	1588071	.	+	.	ID=id2673;Note=9 probable transmembrane helices predicted for YE1416 by TMHMM2.0 at aa 110-132%2C 142-164%2C 243-265%2C280-302%2C 323-345%2C 360-382%2C 389-411%2C 431-453 and 462-484;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	1588096	1588164	.	+	.	ID=id2673;Note=9 probable transmembrane helices predicted for YE1416 by TMHMM2.0 at aa 110-132%2C 142-164%2C 243-265%2C280-302%2C 323-345%2C 360-382%2C 389-411%2C 431-453 and 462-484;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	1587220	1587252	.	+	.	ID=id2674;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1588343	1589779	.	+	.	ID=gene1416;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=YE1417
AM286415.1	EMBL	CDS	1588343	1589779	.	+	0	ID=cds1359;Parent=gene1416;Dbxref=EnsemblGenomes-Gn:YE1417,EnsemblGenomes-Tr:CAL11507,GOA:A1JLL0,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018120,UniProtKB/TrEMBL:A1JLL0,NCBI_GP:CAL11507.1;Name=CAL11507.1;gbkey=CDS;gene=bglA;product=6-phospho-beta-glucosidase;protein_id=CAL11507.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1588346	1589776	.	+	.	ID=id2675;Note=Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1%2C score 466.9%2C E-value 1.1e-137;gbkey=misc_feature;gene=bglA;inference=protein motif:PFAM:PF00232
AM286415.1	EMBL	sequence_feature	1588370	1588414	.	+	.	ID=id2676;Note=PS00653 Glycosyl hydrolases family 1 N-terminal signature.;gbkey=misc_feature;gene=bglA;inference=protein motif:Prosite:PS00653
AM286415.1	EMBL	sequence_feature	1589456	1589482	.	+	.	ID=id2677;Note=PS00572 Glycosyl hydrolases family 1 active site.;gbkey=misc_feature;gene=bglA;inference=protein motif:Prosite:PS00572
AM286415.1	EMBL	gene	1590524	1591555	.	-	.	ID=gene1417;Name=YE1418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1418
AM286415.1	EMBL	CDS	1590524	1591555	.	-	0	ID=cds1360;Parent=gene1417;Dbxref=EnsemblGenomes-Gn:YE1418,EnsemblGenomes-Tr:CAL11508,GOA:A1JLL3,InterPro:IPR001077,InterPro:IPR011991,InterPro:IPR016461,InterPro:IPR029063,UniProtKB/TrEMBL:A1JLL3,NCBI_GP:CAL11508.1;Name=CAL11508.1;Note=Similar to many O-methyltransferases including: Streptomyces lipmanii O-demethylpuromycin-o-methyltransferase DmpM SWALL:DMPM_STRLP (SWALL:P42712) (376 aa) fasta scores: E(): 6.6e-26%2C 32.64 38d in 337 aa%2C Streptomyces avermitilis O-methyltransferase SWALL:Q93HA8 (EMBL:AB070947) (359 aa) fasta scores: E(): 5.4e-22%2C29.74 38d in 316 aa and Pseudomonas aeruginosa probable O-methyltransferase Pa4209 SWALL:Q9HWH2 (EMBL:AE004837) (334 aa) fasta scores: E(): 3.3e-20%2C 29.44 38d in 343 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P42712;product=putative O-methyltransferase;protein_id=CAL11508.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1590599	1591312	.	-	.	ID=id2678;Note=Pfam match to entry PF00891 Methyltransf_2%2CO-methyltransferase%2C score 151.2%2C E-value 1.2e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF00891
AM286415.1	EMBL	sequence_feature	1591361	1591426	.	-	.	ID=id2679;Note=Predicted helix-turn-helix motif with score 1093.000%2C SD 2.91 at aa 44-65%2C sequence KKEAKTAEELGQTVGADSRQLN;gbkey=misc_feature
AM286415.1	EMBL	gene	1591923	1591999	.	-	.	ID=gene1418;Name=tRNA-Pro (GGG);gbkey=Gene;gene=tRNA-Pro (GGG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1591923	1591999	.	-	.	ID=rna71;Parent=gene1418;gbkey=tRNA;gene=tRNA-Pro (GGG);product=tRNA-Pro
AM286415.1	EMBL	exon	1591923	1591999	.	-	.	ID=id2680;Parent=rna71;gbkey=tRNA;gene=tRNA-Pro (GGG);product=tRNA-Pro
AM286415.1	EMBL	gene	1592097	1593890	.	-	.	ID=gene1419;Name=YE1419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1419
AM286415.1	EMBL	CDS	1592097	1593890	.	-	0	ID=cds1361;Parent=gene1419;Dbxref=EnsemblGenomes-Gn:YE1419,EnsemblGenomes-Tr:CAL11509,GOA:A1JLM3,InterPro:IPR000917,InterPro:IPR001610,InterPro:IPR012159,InterPro:IPR017849,InterPro:IPR017850,InterPro:IPR024588,UniProtKB/TrEMBL:A1JLM3,NCBI_GP:CAL11509.1;Name=CAL11509.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11509.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1592118	1593116	.	-	.	ID=id2681;Note=Pfam match to entry PF00884 Sulfatase%2C Sulfatase %2Cscore 23.3%2C E-value 7.3e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00884
AM286415.1	EMBL	sequence_feature	1593762	1593830	.	-	.	ID=id2682;Note=5 probable transmembrane helices predicted for YE1419 by TMHMM2.0 at aa 21-43%2C 58-80%2C 85-103%2C 135-157 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	1593651	1593719	.	-	.	ID=id2682;Note=5 probable transmembrane helices predicted for YE1419 by TMHMM2.0 at aa 21-43%2C 58-80%2C 85-103%2C 135-157 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	1593582	1593638	.	-	.	ID=id2682;Note=5 probable transmembrane helices predicted for YE1419 by TMHMM2.0 at aa 21-43%2C 58-80%2C 85-103%2C 135-157 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	1593420	1593488	.	-	.	ID=id2682;Note=5 probable transmembrane helices predicted for YE1419 by TMHMM2.0 at aa 21-43%2C 58-80%2C 85-103%2C 135-157 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	1593321	1593389	.	-	.	ID=id2682;Note=5 probable transmembrane helices predicted for YE1419 by TMHMM2.0 at aa 21-43%2C 58-80%2C 85-103%2C 135-157 and 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	1593687	1593890	.	-	.	ID=id2683;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	gene	1593918	1594145	.	-	.	ID=gene1420;Name=YE1420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1420
AM286415.1	EMBL	CDS	1593918	1594145	.	-	0	ID=cds1362;Parent=gene1420;Dbxref=EnsemblGenomes-Gn:YE1420,EnsemblGenomes-Tr:CAL11510,InterPro:IPR009857,InterPro:IPR023202,NCBI_GP:CAL11510.1;Name=CAL11510.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11510.1;transl_table=11
AM286415.1	EMBL	gene	1594323	1595324	.	+	.	ID=gene1421;Name=YE1421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1421
AM286415.1	EMBL	CDS	1594323	1595324	.	+	0	ID=cds1363;Parent=gene1421;Dbxref=EnsemblGenomes-Gn:YE1421,EnsemblGenomes-Tr:CAL11511,GOA:A1JLM8,InterPro:IPR007358,NCBI_GP:CAL11511.1;Name=CAL11511.1;gbkey=CDS;product=putative nucleoid-associated protein;protein_id=CAL11511.1;transl_table=11
AM286415.1	EMBL	gene	1595406	1595693	.	-	.	ID=gene1422;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=YE1422
AM286415.1	EMBL	CDS	1595406	1595693	.	-	0	ID=cds1364;Parent=gene1422;Dbxref=EnsemblGenomes-Gn:YE1422,EnsemblGenomes-Tr:CAL11512,GOA:A1JLN0,InterPro:IPR011035,InterPro:IPR020055,InterPro:IPR020056,InterPro:IPR029751,NCBI_GP:CAL11512.1;Name=CAL11512.1;gbkey=CDS;gene=rplY;product=50S ribosomal protein L25;protein_id=CAL11512.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1595418	1595684	.	-	.	ID=id2684;Note=Pfam match to entry PF01386 Ribosomal_L25p%2CRibosomal L25p family%2C score 132.1%2C E-value 6.6e-37;gbkey=misc_feature;gene=rplY;inference=protein motif:PFAM:PF01386
AM286415.1	EMBL	gene	1595855	1597612	.	-	.	ID=gene1423;Name=YE1423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1423
AM286415.1	EMBL	CDS	1595855	1597612	.	-	0	ID=cds1365;Parent=gene1423;Dbxref=EnsemblGenomes-Gn:YE1423,EnsemblGenomes-Tr:CAL11513,GOA:A1JLN3,InterPro:IPR001650,InterPro:IPR006935,InterPro:IPR011332,InterPro:IPR014001,InterPro:IPR027417,UniProtKB/TrEMBL:A1JLN3,NCBI_GP:CAL11513.1;Name=CAL11513.1;gbkey=CDS;product=putative DEAD box helicase family protein;protein_id=CAL11513.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1596578	1596793	.	-	.	ID=id2685;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 46.4%2C E-value 4.2e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	1597058	1597612	.	-	.	ID=id2686;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 24.7%2C E-value 2e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00270
AM286415.1	EMBL	gene	1597953	1598660	.	+	.	ID=gene1424;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=YE1424
AM286415.1	EMBL	CDS	1597953	1598660	.	+	0	ID=cds1366;Parent=gene1424;Dbxref=EnsemblGenomes-Gn:YE1424,EnsemblGenomes-Tr:CAL11514,GOA:A1JLN5,InterPro:IPR000748,InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR018496,InterPro:IPR020103,UniProtKB/TrEMBL:A1JLN5,NCBI_GP:CAL11514.1;Name=CAL11514.1;gbkey=CDS;gene=rsuA;product=ribosomal small subunit pseudouridine synthase A;protein_id=CAL11514.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1597953	1598093	.	+	.	ID=id2687;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 40.4%2C E-value 2.6e-09;gbkey=misc_feature;gene=rsuA;inference=protein motif:PFAM:PF01479
AM286415.1	EMBL	sequence_feature	1598133	1598528	.	+	.	ID=id2688;Note=Pfam match to entry PF00849 PseudoU_synth_2%2C RNA pseudouridylate synthase%2C score 100.5%2C E-value 2.1e-27;gbkey=misc_feature;gene=rsuA;inference=protein motif:PFAM:PF00849
AM286415.1	EMBL	sequence_feature	1598247	1598291	.	+	.	ID=id2689;Note=PS01149 Rsu family of pseudouridine synthase signature.;gbkey=misc_feature;gene=rsuA;inference=protein motif:Prosite:PS01149
AM286415.1	EMBL	gene	1598810	1599982	.	+	.	ID=gene1425;Name=bcr;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;gene_synonym=bicA,bicR,sur,suxA;locus_tag=YE1425
AM286415.1	EMBL	CDS	1598810	1599982	.	+	0	ID=cds1367;Parent=gene1425;Dbxref=EnsemblGenomes-Gn:YE1425,EnsemblGenomes-Tr:CAL11515,GOA:A1JLN8,InterPro:IPR004812,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JLN8,NCBI_GP:CAL11515.1;Name=CAL11515.1;gbkey=CDS;gene=bcr;product=probable drug resistance translocator protein;protein_id=CAL11515.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1598810	1599973	.	+	.	ID=id2690;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -68.4%2C E-value 2e-05;gbkey=misc_feature;gene=bcr;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	1598822	1598890	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1598918	1598986	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1599005	1599073	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1599083	1599151	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1599188	1599256	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1599266	1599334	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1599434	1599502	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1599530	1599598	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1599635	1599703	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1599716	1599775	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1599812	1599871	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1599884	1599952	.	+	.	ID=id2691;Note=12 probable transmembrane helices predicted for YE1425 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88%2C 92-114%2C127-149%2C 153-175%2C 209-231%2C 241-263%2C 276-298%2C 303-322%2C335-354 and 359-381;gbkey=misc_feature;gene=bcr;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	1599023	1599055	.	+	.	ID=id2692;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=bcr;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1600698	1601045	.	+	.	ID=gene1426;Name=YE1426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1426
AM286415.1	EMBL	CDS	1600698	1601045	.	+	0	ID=cds1368;Parent=gene1426;Dbxref=EnsemblGenomes-Gn:YE1426,EnsemblGenomes-Tr:CAL11516,InterPro:IPR020489,UniProtKB/TrEMBL:A1JLP0,NCBI_GP:CAL11516.1;Name=CAL11516.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11516.1;transl_table=11
AM286415.1	EMBL	gene	1601117	1602709	.	-	.	ID=gene1427;Name=YE1427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1427
AM286415.1	EMBL	CDS	1601117	1602709	.	-	0	ID=cds1369;Parent=gene1427;Dbxref=EnsemblGenomes-Gn:YE1427,EnsemblGenomes-Tr:CAL11517,GOA:A1JLP3,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013563,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JLP3,NCBI_GP:CAL11517.1;Name=CAL11517.1;gbkey=CDS;product=putative ABC transporter ATP-binding subunit;protein_id=CAL11517.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1601204	1601773	.	-	.	ID=id2693;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 213.6%2C E-value 1.9e-61;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1601390	1601434	.	-	.	ID=id2694;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1601729	1601752	.	-	.	ID=id2695;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1602008	1602604	.	-	.	ID=id2696;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 200.5%2C E-value 1.7e-57;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1602194	1602238	.	-	.	ID=id2697;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1602560	1602583	.	-	.	ID=id2698;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1602711	1603739	.	-	.	ID=gene1428;Name=YE1428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1428
AM286415.1	EMBL	CDS	1602711	1603739	.	-	0	ID=cds1370;Parent=gene1428;Dbxref=EnsemblGenomes-Gn:YE1428,EnsemblGenomes-Tr:CAL11518,GOA:A1JLP7,InterPro:IPR000515,InterPro:IPR025966,UniProtKB/TrEMBL:A1JLP7,NCBI_GP:CAL11518.1;Name=CAL11518.1;gbkey=CDS;product=putative ABC transporter integral membrane subunit;protein_id=CAL11518.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1603611	1603679	.	-	.	ID=id2699;Note=6 probable transmembrane helices predicted for YE1428 by TMHMM2.0 at aa 21-43%2C 138-160%2C 180-202%2C 206-228%2C255-277 and 307-329;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1603260	1603328	.	-	.	ID=id2699;Note=6 probable transmembrane helices predicted for YE1428 by TMHMM2.0 at aa 21-43%2C 138-160%2C 180-202%2C 206-228%2C255-277 and 307-329;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1603134	1603202	.	-	.	ID=id2699;Note=6 probable transmembrane helices predicted for YE1428 by TMHMM2.0 at aa 21-43%2C 138-160%2C 180-202%2C 206-228%2C255-277 and 307-329;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1603056	1603124	.	-	.	ID=id2699;Note=6 probable transmembrane helices predicted for YE1428 by TMHMM2.0 at aa 21-43%2C 138-160%2C 180-202%2C 206-228%2C255-277 and 307-329;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1602909	1602977	.	-	.	ID=id2699;Note=6 probable transmembrane helices predicted for YE1428 by TMHMM2.0 at aa 21-43%2C 138-160%2C 180-202%2C 206-228%2C255-277 and 307-329;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1602753	1602821	.	-	.	ID=id2699;Note=6 probable transmembrane helices predicted for YE1428 by TMHMM2.0 at aa 21-43%2C 138-160%2C 180-202%2C 206-228%2C255-277 and 307-329;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1602831	1603061	.	-	.	ID=id2700;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 73.3%2C E-value 3.4e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	1602972	1603058	.	-	.	ID=id2701;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	1603736	1604836	.	-	.	ID=gene1429;Name=YE1429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1429
AM286415.1	EMBL	CDS	1603736	1604836	.	-	0	ID=cds1371;Parent=gene1429;Dbxref=EnsemblGenomes-Gn:YE1429,EnsemblGenomes-Tr:CAL11519,GOA:A1JLP9,InterPro:IPR000515,UniProtKB/TrEMBL:A1JLP9,NCBI_GP:CAL11519.1;Name=CAL11519.1;gbkey=CDS;product=putative ABC transporter integral membrane subunit;protein_id=CAL11519.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1604744	1604812	.	-	.	ID=id2702;Note=6 probable transmembrane helices predicted for YE1429 by TMHMM2.0 at aa 9-31%2C 135-157%2C 170-192%2C 225-247%2C284-306 and 330-349;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1604366	1604434	.	-	.	ID=id2702;Note=6 probable transmembrane helices predicted for YE1429 by TMHMM2.0 at aa 9-31%2C 135-157%2C 170-192%2C 225-247%2C284-306 and 330-349;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1604261	1604329	.	-	.	ID=id2702;Note=6 probable transmembrane helices predicted for YE1429 by TMHMM2.0 at aa 9-31%2C 135-157%2C 170-192%2C 225-247%2C284-306 and 330-349;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1604096	1604164	.	-	.	ID=id2702;Note=6 probable transmembrane helices predicted for YE1429 by TMHMM2.0 at aa 9-31%2C 135-157%2C 170-192%2C 225-247%2C284-306 and 330-349;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1603919	1603987	.	-	.	ID=id2702;Note=6 probable transmembrane helices predicted for YE1429 by TMHMM2.0 at aa 9-31%2C 135-157%2C 170-192%2C 225-247%2C284-306 and 330-349;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1603790	1603849	.	-	.	ID=id2702;Note=6 probable transmembrane helices predicted for YE1429 by TMHMM2.0 at aa 9-31%2C 135-157%2C 170-192%2C 225-247%2C284-306 and 330-349;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1603865	1604083	.	-	.	ID=id2703;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 57.0%2C E-value 2.7e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	1604846	1606654	.	-	.	ID=gene1430;Name=YE1430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1430
AM286415.1	EMBL	CDS	1604846	1606654	.	-	0	ID=cds1372;Parent=gene1430;Dbxref=EnsemblGenomes-Gn:YE1430,EnsemblGenomes-Tr:CAL11520,GOA:A1JLQ0,InterPro:IPR000914,UniProtKB/TrEMBL:A1JLQ0,NCBI_GP:CAL11520.1;Name=CAL11520.1;gbkey=CDS;product=putative substrate-binding transport protein;protein_id=CAL11520.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1604888	1606642	.	-	.	ID=id2704;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score -28.9%2C E-value 3e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	gene	1606753	1608315	.	-	.	ID=gene1431;Name=YE1431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1431
AM286415.1	EMBL	CDS	1606753	1608315	.	-	0	ID=cds1373;Parent=gene1431;Dbxref=EnsemblGenomes-Gn:YE1431,EnsemblGenomes-Tr:CAL11521,InterPro:IPR001633,InterPro:IPR024744,UniProtKB/TrEMBL:A1JLQ3,NCBI_GP:CAL11521.1;Name=CAL11521.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11521.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1606786	1607523	.	-	.	ID=id2705;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score 313.1%2C E-value 2.1e-91;gbkey=misc_feature;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	sequence_feature	1607521	1607589	.	-	.	ID=id2706;Note=probable transmembrane helix predicted for YE1431 by TMHMM2.0 at aa 22-41;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1608604	1608813	.	+	.	ID=gene1432;Name=YE1432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1432
AM286415.1	EMBL	CDS	1608604	1608813	.	+	0	ID=cds1374;Parent=gene1432;Dbxref=EnsemblGenomes-Gn:YE1432,EnsemblGenomes-Tr:CAL11522,UniProtKB/TrEMBL:A1JLQ6,NCBI_GP:CAL11522.1;Name=CAL11522.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11522.1;transl_table=11
AM286415.1	EMBL	gene	1608821	1609405	.	-	.	ID=gene1433;Name=spr;gbkey=Gene;gene=spr;gene_biotype=protein_coding;locus_tag=YE1433
AM286415.1	EMBL	CDS	1608821	1609405	.	-	0	ID=cds1375;Parent=gene1433;Dbxref=EnsemblGenomes-Gn:YE1433,EnsemblGenomes-Tr:CAL11523,InterPro:IPR000064,UniProtKB/TrEMBL:A1JLQ7,NCBI_GP:CAL11523.1;Name=CAL11523.1;gbkey=CDS;gene=spr;product=putative lipoprotein;protein_id=CAL11523.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1608845	1609177	.	-	.	ID=id2707;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 173.0%2C E-value 3.1e-49;gbkey=misc_feature;gene=spr;inference=protein motif:PFAM:PF00877
AM286415.1	EMBL	sequence_feature	1609325	1609357	.	-	.	ID=id2708;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=spr;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1609784	1610485	.	-	.	ID=gene1434;Name=YE1434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1434
AM286415.1	EMBL	CDS	1609784	1610485	.	-	0	ID=cds1376;Parent=gene1434;Dbxref=EnsemblGenomes-Gn:YE1434,EnsemblGenomes-Tr:CAL11524,GOA:A1JLR0,InterPro:IPR000326,UniProtKB/TrEMBL:A1JLR0,NCBI_GP:CAL11524.1;Name=CAL11524.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11524.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1609832	1610296	.	-	.	ID=id2709;Note=Pfam match to entry PF01569 PAP2%2C PAP2 superfamily%2C score 39.1%2C E-value 6.5e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF01569
AM286415.1	EMBL	sequence_feature	1610405	1610473	.	-	.	ID=id2710;Note=5 probable transmembrane helices predicted for YE1434 by TMHMM2.0 at aa 5-27%2C 64-81%2C 93-115%2C 160-182 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	1610243	1610296	.	-	.	ID=id2710;Note=5 probable transmembrane helices predicted for YE1434 by TMHMM2.0 at aa 5-27%2C 64-81%2C 93-115%2C 160-182 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	1610141	1610209	.	-	.	ID=id2710;Note=5 probable transmembrane helices predicted for YE1434 by TMHMM2.0 at aa 5-27%2C 64-81%2C 93-115%2C 160-182 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	1609940	1610008	.	-	.	ID=id2710;Note=5 probable transmembrane helices predicted for YE1434 by TMHMM2.0 at aa 5-27%2C 64-81%2C 93-115%2C 160-182 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	1609853	1609921	.	-	.	ID=id2710;Note=5 probable transmembrane helices predicted for YE1434 by TMHMM2.0 at aa 5-27%2C 64-81%2C 93-115%2C 160-182 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	1610549	1611532	.	-	.	ID=gene1435;Name=YE1435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1435
AM286415.1	EMBL	CDS	1610549	1611532	.	-	0	ID=cds1377;Parent=gene1435;Dbxref=EnsemblGenomes-Gn:YE1435,EnsemblGenomes-Tr:CAL11525,InterPro:IPR003495,InterPro:IPR011629,InterPro:IPR027417,UniProtKB/TrEMBL:A1JLR2,NCBI_GP:CAL11525.1;Name=CAL11525.1;gbkey=CDS;product=putative cobalamin synthesis protein;protein_id=CAL11525.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1610567	1611532	.	-	.	ID=id2711;Note=Pfam match to entry PF02492 cobW%2C Cobalamin synthesis protein/P47K%2C score 249.6%2C E-value 2.8e-72;gbkey=misc_feature;inference=protein motif:PFAM:PF02492
AM286415.1	EMBL	sequence_feature	1611485	1611508	.	-	.	ID=id2712;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1611844	1612170	.	+	.	ID=gene1436;Name=YE1436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1436
AM286415.1	EMBL	CDS	1611844	1612170	.	+	0	ID=cds1378;Parent=gene1436;Dbxref=EnsemblGenomes-Gn:YE1436,EnsemblGenomes-Tr:CAL11526,UniProtKB/TrEMBL:A1JLR4,NCBI_GP:CAL11526.1;Name=CAL11526.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11526.1;transl_table=11
AM286415.1	EMBL	gene	1612378	1613121	.	+	.	ID=gene1437;Name=YE1437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1437
AM286415.1	EMBL	CDS	1612378	1613121	.	+	0	ID=cds1379;Parent=gene1437;Dbxref=EnsemblGenomes-Gn:YE1437,EnsemblGenomes-Tr:CAL11527,GOA:A1JLR7,InterPro:IPR000524,InterPro:IPR008920,InterPro:IPR011711,InterPro:IPR011991,UniProtKB/TrEMBL:A1JLR7,NCBI_GP:CAL11527.1;Name=CAL11527.1;gbkey=CDS;product=putative transcriptional regulatory protein;protein_id=CAL11527.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1612396	1612575	.	+	.	ID=id2713;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 101.6%2C E-value 9.7e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	sequence_feature	1612453	1612527	.	+	.	ID=id2714;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00043
AM286415.1	EMBL	gene	1613415	1614887	.	-	.	ID=gene1438;Name=YE1438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1438
AM286415.1	EMBL	CDS	1613415	1614887	.	-	0	ID=cds1380;Parent=gene1438;Dbxref=EnsemblGenomes-Gn:YE1438,EnsemblGenomes-Tr:CAL11528,GOA:A1JLR9,InterPro:IPR000669,InterPro:IPR008927,InterPro:IPR013118,InterPro:IPR013131,InterPro:IPR013328,InterPro:IPR016040,InterPro:IPR023027,UniProtKB/TrEMBL:A1JLR9,NCBI_GP:CAL11528.1;Name=CAL11528.1;gbkey=CDS;product=putative D-mannonate oxidoreductase;protein_id=CAL11528.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1613544	1614815	.	-	.	ID=id2715;Note=Pfam match to entry PF01232 Mannitol_dh%2C Mannitol dehydrogenase%2C score 745.5%2C E-value 1.5e-221;gbkey=misc_feature;inference=protein motif:PFAM:PF01232
AM286415.1	EMBL	sequence_feature	1614198	1614236	.	-	.	ID=id2716;Note=PS00974 Mannitol dehydrogenases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00974
AM286415.1	EMBL	gene	1614962	1615240	.	-	.	ID=gene1439;Name=YE1439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1439
AM286415.1	EMBL	CDS	1614962	1615240	.	-	0	ID=cds1381;Parent=gene1439;Dbxref=EnsemblGenomes-Gn:YE1439,EnsemblGenomes-Tr:CAL11529,UniProtKB/TrEMBL:A1JLS1,NCBI_GP:CAL11529.1;Name=CAL11529.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11529.1;transl_table=11
AM286415.1	EMBL	gene	1615332	1616522	.	+	.	ID=gene1440;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=YE1440
AM286415.1	EMBL	CDS	1615332	1616522	.	+	0	ID=cds1382;Parent=gene1440;Dbxref=EnsemblGenomes-Gn:YE1440,EnsemblGenomes-Tr:CAL11530,GOA:A1JLS2,InterPro:IPR004628,InterPro:IPR013022,NCBI_GP:CAL11530.1;Name=CAL11530.1;gbkey=CDS;gene=uxuA;product=mannonate dehydratase;protein_id=CAL11530.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1615332	1616498	.	+	.	ID=id2717;Note=Pfam match to entry PF03786 UxuA%2C D-mannonate dehydratase (UxuA)%2C score 850.2%2C E-value 4.4e-253;gbkey=misc_feature;gene=uxuA;inference=protein motif:PFAM:PF03786
AM286415.1	EMBL	gene	1616709	1617281	.	-	.	ID=gene1441;Name=YE1441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1441
AM286415.1	EMBL	CDS	1616709	1617281	.	-	0	ID=cds1383;Parent=gene1441;Dbxref=EnsemblGenomes-Gn:YE1441,EnsemblGenomes-Tr:CAL11531,GOA:A1JLS4,InterPro:IPR001059,InterPro:IPR008991,InterPro:IPR011897,InterPro:IPR012340,InterPro:IPR013185,InterPro:IPR013852,InterPro:IPR014722,InterPro:IPR015365,InterPro:IPR020599,NCBI_GP:CAL11531.1;Name=CAL11531.1;gbkey=CDS;product=putative elongation factor P;protein_id=CAL11531.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1616715	1617281	.	-	.	ID=id2718;Note=Pfam match to entry PF01132 EFP%2C Elongation factor P (EF-P)%2C score 330.7%2C E-value 1.1e-96;gbkey=misc_feature;inference=protein motif:PFAM:PF01132
AM286415.1	EMBL	sequence_feature	1616739	1616768	.	-	.	ID=id2719;Note=PS00215 Mitochondrial energy transfer proteins signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00215
AM286415.1	EMBL	sequence_feature	1616763	1616822	.	-	.	ID=id2720;Note=PS01275 Elongation factor P signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01275
AM286415.1	EMBL	gene	1617394	1618638	.	-	.	ID=gene1442;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=YE1442
AM286415.1	EMBL	CDS	1617394	1618638	.	-	0	ID=cds1384;Parent=gene1442;Dbxref=EnsemblGenomes-Gn:YE1442,EnsemblGenomes-Tr:CAL11532,GOA:A1JLS7,InterPro:IPR002091,InterPro:IPR006311,InterPro:IPR013059,InterPro:IPR018227,UniProtKB/TrEMBL:A1JLS7,NCBI_GP:CAL11532.1;Name=CAL11532.1;gbkey=CDS;gene=mtr;product=putative tryptophan-specific transport protein;protein_id=CAL11532.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1618534	1618602	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1618438	1618506	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1618312	1618380	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1618201	1618269	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1618114	1618182	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1618003	1618071	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1617898	1617966	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1617709	1617777	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1617619	1617672	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1617538	1617606	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1617409	1617477	.	-	.	ID=id2721;Note=11 probable transmembrane helices predicted for YE1442 by TMHMM2.0 at aa 13-35%2C 45-67%2C 87-109%2C 124-146%2C153-175%2C 190-212%2C 225-247%2C 288-310%2C 323-340%2C 345-367 and 388-410;gbkey=misc_feature;gene=mtr;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	1617433	1618611	.	-	.	ID=id2722;Note=Pfam match to entry PF03222 Trp_Tyr_perm%2CTryptophan/tyrosine permease family%2C score 664.6%2C E-value 3.4e-197;gbkey=misc_feature;gene=mtr;inference=protein motif:PFAM:PF03222
AM286415.1	EMBL	gene	1618976	1619230	.	+	.	ID=gene1443;Name=YE1443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1443
AM286415.1	EMBL	CDS	1618976	1619230	.	+	0	ID=cds1385;Parent=gene1443;Dbxref=EnsemblGenomes-Gn:YE1443,EnsemblGenomes-Tr:CAL11533,InterPro:IPR005358,UniProtKB/TrEMBL:A1JLT3,NCBI_GP:CAL11533.1;Name=CAL11533.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11533.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1618976	1619221	.	+	.	ID=id2723;Note=Pfam match to entry PF03692 UPF0153%2CUncharacterised protein family (UPF0153)%2C score 171.8%2CE-value 7.6e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF03692
AM286415.1	EMBL	gene	1619402	1621882	.	-	.	ID=gene1444;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=YE1444
AM286415.1	EMBL	CDS	1619402	1621882	.	-	0	ID=cds1386;Parent=gene1444;Dbxref=EnsemblGenomes-Gn:YE1444,EnsemblGenomes-Tr:CAL11534,GOA:A1JLT5,InterPro:IPR006311,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006658,InterPro:IPR009010,UniProtKB/TrEMBL:A1JLT5,NCBI_GP:CAL11534.1;Name=CAL11534.1;Note=Highly similar to many oxidoreductases including: Rhodobacter capsulatus dimethyl sulfoxide reductase precursor DorA SWALL:DMSA_RHOCA (SWALL:Q52675) (823 aa) fasta scores: E(): 4.1e-167%2C 51.97 38d in 837 aa and Escherichia coli trimethylamine-N-oxide reductase 1 precursor TorA or b0997 SWALL:TORA_ECOLI (SWALL:P33225) (848 aa) fasta scores: E(): 1.7e-105%2C 47.01 38d in 836 aa;gbkey=CDS;gene=torA;inference=similar to sequence:UniProtKB:Q52675;product=putative molybdopterin-containing oxidoreductase;protein_id=CAL11534.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1619471	1619836	.	-	.	ID=id2724;Note=Pfam match to entry PF01568 Molydop_binding%2CMolydopterin dinucleotide binding domain%2C score 140.1%2CE-value 2.6e-39;gbkey=misc_feature;gene=torA;inference=protein motif:PFAM:PF01568
AM286415.1	EMBL	sequence_feature	1619933	1621732	.	-	.	ID=id2725;Note=Pfam match to entry PF00384 molybdopterin%2CMolybdopterin oxidoreductase%2C score 722.4%2C E-value 1.3e-214;gbkey=misc_feature;gene=torA;inference=protein motif:PFAM:PF00384
AM286415.1	EMBL	sequence_feature	1620314	1620367	.	-	.	ID=id2726;Note=PS00490 Prokaryotic molybdopterin oxidoreductases signature 2.;gbkey=misc_feature;gene=torA;inference=protein motif:Prosite:PS00490
AM286415.1	EMBL	gene	1621896	1623044	.	-	.	ID=gene1445;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=YE1445
AM286415.1	EMBL	CDS	1621896	1623044	.	-	0	ID=cds1387;Parent=gene1445;Dbxref=EnsemblGenomes-Gn:YE1445,EnsemblGenomes-Tr:CAL11535,GOA:A1JLT8,InterPro:IPR005126,InterPro:IPR009154,InterPro:IPR011031,UniProtKB/TrEMBL:A1JLT8,NCBI_GP:CAL11535.1;Name=CAL11535.1;Note=Similar to Escherichia coli cytochrome C-type protein TorC or b0996 SWALL:TORC_ECOLI (SWALL:P33226) (390 aa) fasta scores: E(): 4e-55%2C 41.5 38d in 371 aa%2C and to Escherichia coli cytochrome C-type protein TorY or b1873 SWALL:TORY_ECOLI (SWALL:P52005) (366 aa) fasta scores: E(): 3.4e-55%2C 44.56 38d in 377 aa;gbkey=CDS;gene=torC;inference=similar to sequence:UniProtKB:P52005;product=cytochrome C-type protein;protein_id=CAL11535.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1622043	1622060	.	-	.	ID=id2727;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=torC;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1622499	1623017	.	-	.	ID=id2728;Note=Pfam match to entry PF03264 Cytochrome_NNT%2CNapC/NirT cytochrome c family%2C N-terminal region%2C score 323.6%2C E-value 1.5e-94;gbkey=misc_feature;gene=torC;inference=protein motif:PFAM:PF03264
AM286415.1	EMBL	sequence_feature	1622526	1622543	.	-	.	ID=id2729;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=torC;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1622622	1622639	.	-	.	ID=id2730;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=torC;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1622802	1622819	.	-	.	ID=id2731;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=torC;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	1622889	1622906	.	-	.	ID=id2732;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=torC;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	1623346	1623768	.	-	.	ID=gene1446;Name=YE1446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1446
AM286415.1	EMBL	CDS	1623346	1623768	.	-	0	ID=cds1388;Parent=gene1446;Dbxref=EnsemblGenomes-Gn:YE1446,EnsemblGenomes-Tr:CAL11536,GOA:A1JLU1,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR020476,UniProtKB/TrEMBL:A1JLU1,NCBI_GP:CAL11536.1;Name=CAL11536.1;gbkey=CDS;product=putative Mut family protein;protein_id=CAL11536.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1623370	1623762	.	-	.	ID=id2733;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 96.2%2C E-value 4.3e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	sequence_feature	1623604	1623663	.	-	.	ID=id2734;Note=PS00893 mutT domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00893
AM286415.1	EMBL	gene	1624049	1625182	.	+	.	ID=gene1447;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;gene_synonym=fpr,fruF;locus_tag=YE1447
AM286415.1	EMBL	CDS	1624049	1625182	.	+	0	ID=cds1389;Parent=gene1447;Dbxref=EnsemblGenomes-Gn:YE1447,EnsemblGenomes-Tr:CAL11537,GOA:A1JLU3,InterPro:IPR000032,InterPro:IPR001020,InterPro:IPR002114,InterPro:IPR002178,InterPro:IPR016152,UniProtKB/TrEMBL:A1JLU3,NCBI_GP:CAL11537.1;Name=CAL11537.1;gbkey=CDS;gene=fruB;product=fructose-specific pts system component IIa;protein_id=CAL11537.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1624052	1624474	.	+	.	ID=id2735;Note=Pfam match to entry PF00359 PTS_EIIA_2%2CPhosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2%2C score 242.7%2C E-value 3.4e-70;gbkey=misc_feature;gene=fruB;inference=protein motif:PFAM:PF00359
AM286415.1	EMBL	sequence_feature	1624187	1624237	.	+	.	ID=id2736;Note=PS00372 PTS EIIA domains phosphorylation site signature 2.;gbkey=misc_feature;gene=fruB;inference=protein motif:Prosite:PS00372
AM286415.1	EMBL	sequence_feature	1624901	1625161	.	+	.	ID=id2737;Note=Pfam match to entry PF00381 PTS-HPr%2C PTS HPr component phosphorylation site%2C score 167.6%2C E-value 1.4e-47;gbkey=misc_feature;gene=fruB;inference=protein motif:PFAM:PF00381
AM286415.1	EMBL	sequence_feature	1624937	1624960	.	+	.	ID=id2738;Note=PS00369 PTS HPR component histidine phosphorylation site signature.;gbkey=misc_feature;gene=fruB;inference=protein motif:Prosite:PS00369
AM286415.1	EMBL	sequence_feature	1625024	1625071	.	+	.	ID=id2739;Note=PS00589 PTS HPR component serine phosphorylation site signature.;gbkey=misc_feature;gene=fruB;inference=protein motif:Prosite:PS00589
AM286415.1	EMBL	gene	1625179	1626117	.	+	.	ID=gene1448;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;gene_synonym=fpk;locus_tag=YE1448
AM286415.1	EMBL	CDS	1625179	1626117	.	+	0	ID=cds1390;Parent=gene1448;Dbxref=EnsemblGenomes-Gn:YE1448,EnsemblGenomes-Tr:CAL11538,GOA:A1JLU5,InterPro:IPR002173,InterPro:IPR011611,InterPro:IPR017583,InterPro:IPR022463,InterPro:IPR029056,UniProtKB/TrEMBL:A1JLU5,NCBI_GP:CAL11538.1;Name=CAL11538.1;gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=CAL11538.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1625200	1626072	.	+	.	ID=id2740;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 210.8%2C E-value 1.3e-60;gbkey=misc_feature;gene=fruK;inference=protein motif:PFAM:PF00294
AM286415.1	EMBL	sequence_feature	1625272	1625346	.	+	.	ID=id2741;Note=PS00464 Ribosomal protein L22 signature.;gbkey=misc_feature;gene=fruK;inference=protein motif:Prosite:PS00464
AM286415.1	EMBL	sequence_feature	1625293	1625367	.	+	.	ID=id2742;Note=PS00583 pfkB family of carbohydrate kinases signature 1.;gbkey=misc_feature;gene=fruK;inference=protein motif:Prosite:PS00583
AM286415.1	EMBL	sequence_feature	1625923	1625964	.	+	.	ID=id2743;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;gbkey=misc_feature;gene=fruK;inference=protein motif:Prosite:PS00584
AM286415.1	EMBL	gene	1626132	1627817	.	+	.	ID=gene1449;Name=fruA;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;gene_synonym=ptsF;locus_tag=YE1449
AM286415.1	EMBL	CDS	1626132	1627817	.	+	0	ID=cds1391;Parent=gene1449;Dbxref=EnsemblGenomes-Gn:YE1449,EnsemblGenomes-Tr:CAL11539,GOA:A1JLV3,InterPro:IPR003352,InterPro:IPR003353,InterPro:IPR003501,InterPro:IPR006327,InterPro:IPR013011,InterPro:IPR013014,UniProtKB/TrEMBL:A1JLV3,NCBI_GP:CAL11539.1;Name=CAL11539.1;gbkey=CDS;gene=fruA;product=PTS system%2C fructose-specific IIBC component;protein_id=CAL11539.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1626447	1626752	.	+	.	ID=id2744;Note=Pfam match to entry PF02379 PTS_IIB_fruc%2C PTS system%2C Fructose specific IIB subunit%2C score 215.0%2CE-value 7.1e-62;gbkey=misc_feature;gene=fruA;inference=protein motif:PFAM:PF02379
AM286415.1	EMBL	sequence_feature	1626825	1627616	.	+	.	ID=id2745;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 241.3%2C E-value 9.1e-70;gbkey=misc_feature;gene=fruA;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	sequence_feature	1626837	1626905	.	+	.	ID=id2746;Note=9 probable transmembrane helices predicted for YE1449 by TMHMM2.0 at aa 236-258%2C 271-293%2C 306-328%2C349-371%2C 381-403%2C 416-438%2C 464-481%2C 488-510 and 525-547;gbkey=misc_feature;gene=fruA;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	1626942	1627010	.	+	.	ID=id2746;Note=9 probable transmembrane helices predicted for YE1449 by TMHMM2.0 at aa 236-258%2C 271-293%2C 306-328%2C349-371%2C 381-403%2C 416-438%2C 464-481%2C 488-510 and 525-547;gbkey=misc_feature;gene=fruA;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	1627047	1627115	.	+	.	ID=id2746;Note=9 probable transmembrane helices predicted for YE1449 by TMHMM2.0 at aa 236-258%2C 271-293%2C 306-328%2C349-371%2C 381-403%2C 416-438%2C 464-481%2C 488-510 and 525-547;gbkey=misc_feature;gene=fruA;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	1627176	1627244	.	+	.	ID=id2746;Note=9 probable transmembrane helices predicted for YE1449 by TMHMM2.0 at aa 236-258%2C 271-293%2C 306-328%2C349-371%2C 381-403%2C 416-438%2C 464-481%2C 488-510 and 525-547;gbkey=misc_feature;gene=fruA;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	1627272	1627340	.	+	.	ID=id2746;Note=9 probable transmembrane helices predicted for YE1449 by TMHMM2.0 at aa 236-258%2C 271-293%2C 306-328%2C349-371%2C 381-403%2C 416-438%2C 464-481%2C 488-510 and 525-547;gbkey=misc_feature;gene=fruA;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	1627377	1627445	.	+	.	ID=id2746;Note=9 probable transmembrane helices predicted for YE1449 by TMHMM2.0 at aa 236-258%2C 271-293%2C 306-328%2C349-371%2C 381-403%2C 416-438%2C 464-481%2C 488-510 and 525-547;gbkey=misc_feature;gene=fruA;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	1627521	1627574	.	+	.	ID=id2746;Note=9 probable transmembrane helices predicted for YE1449 by TMHMM2.0 at aa 236-258%2C 271-293%2C 306-328%2C349-371%2C 381-403%2C 416-438%2C 464-481%2C 488-510 and 525-547;gbkey=misc_feature;gene=fruA;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	1627593	1627661	.	+	.	ID=id2746;Note=9 probable transmembrane helices predicted for YE1449 by TMHMM2.0 at aa 236-258%2C 271-293%2C 306-328%2C349-371%2C 381-403%2C 416-438%2C 464-481%2C 488-510 and 525-547;gbkey=misc_feature;gene=fruA;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	1627704	1627772	.	+	.	ID=id2746;Note=9 probable transmembrane helices predicted for YE1449 by TMHMM2.0 at aa 236-258%2C 271-293%2C 306-328%2C349-371%2C 381-403%2C 416-438%2C 464-481%2C 488-510 and 525-547;gbkey=misc_feature;gene=fruA;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	1628085	1628750	.	+	.	ID=gene1450;Name=myfE;gbkey=Gene;gene=myfE;gene_biotype=protein_coding;gene_synonym=psaE;locus_tag=YE1450
AM286415.1	EMBL	CDS	1628085	1628750	.	+	0	ID=cds1392;Parent=gene1450;Dbxref=EnsemblGenomes-Gn:YE1450,EnsemblGenomes-Tr:CAL11540,GOA:A1JLV5,InterPro:IPR001867,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JLV5,NCBI_GP:CAL11540.1;Name=CAL11540.1;gbkey=CDS;gene=myfE;product=putative regulatory protein;protein_id=CAL11540.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1628139	1628351	.	+	.	ID=id2747;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 23.1%2C E-value 1.2e-05;gbkey=misc_feature;gene=myfE;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	sequence_feature	1628514	1628573	.	+	.	ID=id2748;Note=1 probable transmembrane helix predicted for YE1450 by TMHMM2.0 at aa 144-163;gbkey=misc_feature;gene=myfE;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1628747	1629238	.	+	.	ID=gene1451;Name=myfF;gbkey=Gene;gene=myfF;gene_biotype=protein_coding;gene_synonym=psaF;locus_tag=YE1451
AM286415.1	EMBL	CDS	1628747	1629238	.	+	0	ID=cds1393;Parent=gene1451;Dbxref=EnsemblGenomes-Gn:YE1451,EnsemblGenomes-Tr:CAL11541,UniProtKB/TrEMBL:A1JLV7,NCBI_GP:CAL11541.1;Name=CAL11541.1;gbkey=CDS;gene=myfF;product=putative membrane protein;protein_id=CAL11541.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1628759	1628815	.	+	.	ID=id2749;Note=1 probable transmembrane helix predicted for YE1451 by TMHMM2.0 at aa 5-23;gbkey=misc_feature;gene=myfF;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1629499	1629978	.	+	.	ID=gene1452;Name=myfA;gbkey=Gene;gene=myfA;gene_biotype=protein_coding;gene_synonym=psaA;locus_tag=YE1452
AM286415.1	EMBL	CDS	1629499	1629978	.	+	0	ID=cds1394;Parent=gene1452;Dbxref=EnsemblGenomes-Gn:YE1452,EnsemblGenomes-Tr:CAL11542,UniProtKB/TrEMBL:A1JLV8,NCBI_GP:CAL11542.1;Name=CAL11542.1;gbkey=CDS;gene=myfA;product=pH 6 antigen precursor (antigen 4) (adhesin);protein_id=CAL11542.1;transl_table=11
AM286415.1	EMBL	gene	1630111	1630914	.	+	.	ID=gene1453;Name=myfB;gbkey=Gene;gene=myfB;gene_biotype=protein_coding;gene_synonym=psaB;locus_tag=YE1453
AM286415.1	EMBL	CDS	1630111	1630914	.	+	0	ID=cds1395;Parent=gene1453;Dbxref=EnsemblGenomes-Gn:YE1453,EnsemblGenomes-Tr:CAL11543,GOA:A1JLW3,InterPro:IPR001829,InterPro:IPR008962,InterPro:IPR016147,InterPro:IPR016148,InterPro:IPR018046,UniProtKB/TrEMBL:A1JLW3,NCBI_GP:CAL11543.1;Name=CAL11543.1;gbkey=CDS;gene=myfB;product=chaperone protein;protein_id=CAL11543.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1630135	1630203	.	+	.	ID=id2750;Note=1 probable transmembrane helix predicted for YE1453 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;gene=myfB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1630237	1630635	.	+	.	ID=id2751;Note=Pfam match to entry PF00345 pili_assembly%2CGram-negative pili assembly chaperone%2C N-terminal domain %2Cscore 255.6%2C E-value 4.5e-74;gbkey=misc_feature;gene=myfB;inference=protein motif:PFAM:PF00345
AM286415.1	EMBL	sequence_feature	1630456	1630509	.	+	.	ID=id2752;Note=PS00635 Gram-negative pili assembly chaperone signature.;gbkey=misc_feature;gene=myfB;inference=protein motif:Prosite:PS00635
AM286415.1	EMBL	sequence_feature	1630645	1630902	.	+	.	ID=id2753;Note=Pfam match to entry PF02753 pili_assembly_C%2CGram-negative pili assembly chaperone%2C C-terminal domain %2Cscore 126.3%2C E-value 3.7e-35;gbkey=misc_feature;gene=myfB;inference=protein motif:PFAM:PF02753
AM286415.1	EMBL	gene	1631151	1633487	.	+	.	ID=gene1454;Name=myfC;gbkey=Gene;gene=myfC;gene_biotype=protein_coding;gene_synonym=psaC;locus_tag=YE1454
AM286415.1	EMBL	CDS	1631151	1633487	.	+	0	ID=cds1396;Parent=gene1454;Dbxref=EnsemblGenomes-Gn:YE1454,EnsemblGenomes-Tr:CAL11544,GOA:A1JLX5,InterPro:IPR000015,InterPro:IPR018030,InterPro:IPR025885,InterPro:IPR025949,UniProtKB/TrEMBL:A1JLX5,NCBI_GP:CAL11544.1;Name=CAL11544.1;gbkey=CDS;gene=myfC;product=outer membrane usher protein;protein_id=CAL11544.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1631154	1633433	.	+	.	ID=id2754;Note=Pfam match to entry PF00577 Usher%2C Fimbrial Usher protein%2C score 1174.0%2C E-value 0;gbkey=misc_feature;gene=myfC;inference=protein motif:PFAM:PF00577
AM286415.1	EMBL	sequence_feature	1631898	1631930	.	+	.	ID=id2755;Note=PS01151 Fimbrial biogenesis outer membrane usher protein signature.;gbkey=misc_feature;gene=myfC;inference=protein motif:Prosite:PS01151
AM286415.1	EMBL	gene	1633555	1634400	.	-	.	ID=gene1455;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=YE1455
AM286415.1	EMBL	CDS	1633555	1634400	.	-	0	ID=cds1397;Parent=gene1455;Dbxref=EnsemblGenomes-Gn:YE1455,EnsemblGenomes-Tr:CAL11545,GOA:A1JLX8,InterPro:IPR001719,InterPro:IPR013022,InterPro:IPR018246,NCBI_GP:CAL11545.1;Name=CAL11545.1;gbkey=CDS;gene=nfo;product=endonuclease IV;protein_id=CAL11545.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1633561	1634379	.	-	.	ID=id2756;Note=Pfam match to entry PF01261 AP_endonuc_2%2C AP endonuclease family 2%2C score 522.7%2C E-value 1.8e-154;gbkey=misc_feature;gene=nfo;inference=protein motif:PFAM:PF01261
AM286415.1	EMBL	sequence_feature	1633675	1633698	.	-	.	ID=id2757;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=nfo;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1633855	1633878	.	-	.	ID=id2758;Note=PS00730 AP endonucleases family 2 signature 2.;gbkey=misc_feature;gene=nfo;inference=protein motif:Prosite:PS00730
AM286415.1	EMBL	sequence_feature	1634170	1634196	.	-	.	ID=id2759;Note=PS00729 AP endonucleases family 2 signature 1.;gbkey=misc_feature;gene=nfo;inference=protein motif:Prosite:PS00729
AM286415.1	EMBL	gene	1634531	1635544	.	-	.	ID=gene1456;Name=YE1456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1456
AM286415.1	EMBL	CDS	1634531	1635544	.	-	0	ID=cds1398;Parent=gene1456;Dbxref=EnsemblGenomes-Gn:YE1456,EnsemblGenomes-Tr:CAL11546,GOA:A1JLY2,InterPro:IPR004630,InterPro:IPR018383,UniProtKB/TrEMBL:A1JLY2,NCBI_GP:CAL11546.1;Name=CAL11546.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11546.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1635419	1635487	.	-	.	ID=id2760;Note=8 probable transmembrane helices predicted for YE1456 by TMHMM2.0 at aa 20-42%2C 78-100%2C 115-137%2C 144-166%2C216-233%2C 254-276%2C 281-303 and 310-332;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	1635245	1635313	.	-	.	ID=id2760;Note=8 probable transmembrane helices predicted for YE1456 by TMHMM2.0 at aa 20-42%2C 78-100%2C 115-137%2C 144-166%2C216-233%2C 254-276%2C 281-303 and 310-332;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	1635134	1635202	.	-	.	ID=id2760;Note=8 probable transmembrane helices predicted for YE1456 by TMHMM2.0 at aa 20-42%2C 78-100%2C 115-137%2C 144-166%2C216-233%2C 254-276%2C 281-303 and 310-332;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	1635047	1635115	.	-	.	ID=id2760;Note=8 probable transmembrane helices predicted for YE1456 by TMHMM2.0 at aa 20-42%2C 78-100%2C 115-137%2C 144-166%2C216-233%2C 254-276%2C 281-303 and 310-332;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	1634846	1634899	.	-	.	ID=id2760;Note=8 probable transmembrane helices predicted for YE1456 by TMHMM2.0 at aa 20-42%2C 78-100%2C 115-137%2C 144-166%2C216-233%2C 254-276%2C 281-303 and 310-332;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	1634717	1634785	.	-	.	ID=id2760;Note=8 probable transmembrane helices predicted for YE1456 by TMHMM2.0 at aa 20-42%2C 78-100%2C 115-137%2C 144-166%2C216-233%2C 254-276%2C 281-303 and 310-332;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	1634636	1634704	.	-	.	ID=id2760;Note=8 probable transmembrane helices predicted for YE1456 by TMHMM2.0 at aa 20-42%2C 78-100%2C 115-137%2C 144-166%2C216-233%2C 254-276%2C 281-303 and 310-332;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	1634549	1634617	.	-	.	ID=id2760;Note=8 probable transmembrane helices predicted for YE1456 by TMHMM2.0 at aa 20-42%2C 78-100%2C 115-137%2C 144-166%2C216-233%2C 254-276%2C 281-303 and 310-332;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	1634603	1635544	.	-	.	ID=id2761;Note=Pfam match to entry PF03601 Cons_hypoth698%2CConserved hypothetical protein 698%2C score 499.0%2C E-value 2.4e-147;gbkey=misc_feature;inference=protein motif:PFAM:PF03601
AM286415.1	EMBL	sequence_feature	1635242	1635274	.	-	.	ID=id2762;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1636174	1637046	.	+	.	ID=gene1457;Name=YE1457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1457
AM286415.1	EMBL	CDS	1636174	1637046	.	+	0	ID=cds1399;Parent=gene1457;Dbxref=EnsemblGenomes-Gn:YE1457,EnsemblGenomes-Tr:CAL11547,GOA:A1JLY4,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JLY4,NCBI_GP:CAL11547.1;Name=CAL11547.1;gbkey=CDS;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL11547.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1636186	1636365	.	+	.	ID=id2763;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 75.3%2C E-value 8.5e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	1636228	1636320	.	+	.	ID=id2764;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	1636423	1637043	.	+	.	ID=id2765;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 177.3%2C E-value 1.6e-50;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	1637291	1638817	.	+	.	ID=gene1458;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;gene_synonym=cadR;locus_tag=YE1458
AM286415.1	EMBL	CDS	1637291	1638817	.	+	0	ID=cds1400;Parent=gene1458;Dbxref=EnsemblGenomes-Gn:YE1458,EnsemblGenomes-Tr:CAL11548,GOA:A1JLY6,InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB/TrEMBL:A1JLY6,NCBI_GP:CAL11548.1;Name=CAL11548.1;gbkey=CDS;gene=lysP;product=putative lysine-specific permease;protein_id=CAL11548.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1637339	1638718	.	+	.	ID=id2766;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 845.4%2C E-value 1.3e-251;gbkey=misc_feature;gene=lysP;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	1637363	1637431	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1637474	1637542	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1637579	1637647	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1637690	1637758	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1637777	1637845	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1637888	1637956	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1638035	1638103	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1638173	1638241	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1638329	1638397	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1638410	1638478	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1638539	1638607	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1638635	1638703	.	+	.	ID=id2767;Note=12 probable transmembrane helices predicted for YE1458 by TMHMM2.0 at aa 25-47%2C 62-84%2C 97-119%2C 134-156%2C163-185%2C 200-222%2C 249-271%2C 295-317%2C 347-369%2C 374-396%2C417-439 and 449-471;gbkey=misc_feature;gene=lysP;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	1637438	1637533	.	+	.	ID=id2768;Note=PS00218 Amino acid permeases signature.;gbkey=misc_feature;gene=lysP;inference=protein motif:Prosite:PS00218
AM286415.1	EMBL	gene	1639092	1640174	.	+	.	ID=gene1459;Name=YE1459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1459
AM286415.1	EMBL	CDS	1639092	1640174	.	+	0	ID=cds1401;Parent=gene1459;Dbxref=EnsemblGenomes-Gn:YE1459,EnsemblGenomes-Tr:CAL11549,GOA:A1JLY9,InterPro:IPR000522,InterPro:IPR029022,UniProtKB/TrEMBL:A1JLY9,NCBI_GP:CAL11549.1;Name=CAL11549.1;gbkey=CDS;product=putative FecCD-family membrane transport protein;protein_id=CAL11549.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1639179	1639247	.	+	.	ID=id2769;Note=9 probable transmembrane helices predicted for YE1459 by TMHMM2.0 at aa 30-52%2C 77-99%2C 112-134%2C 144-162%2C175-197%2C 217-239%2C 274-296%2C 306-325 and 332-354;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	1639320	1639388	.	+	.	ID=id2769;Note=9 probable transmembrane helices predicted for YE1459 by TMHMM2.0 at aa 30-52%2C 77-99%2C 112-134%2C 144-162%2C175-197%2C 217-239%2C 274-296%2C 306-325 and 332-354;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	1639425	1639493	.	+	.	ID=id2769;Note=9 probable transmembrane helices predicted for YE1459 by TMHMM2.0 at aa 30-52%2C 77-99%2C 112-134%2C 144-162%2C175-197%2C 217-239%2C 274-296%2C 306-325 and 332-354;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	1639521	1639577	.	+	.	ID=id2769;Note=9 probable transmembrane helices predicted for YE1459 by TMHMM2.0 at aa 30-52%2C 77-99%2C 112-134%2C 144-162%2C175-197%2C 217-239%2C 274-296%2C 306-325 and 332-354;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	1639614	1639682	.	+	.	ID=id2769;Note=9 probable transmembrane helices predicted for YE1459 by TMHMM2.0 at aa 30-52%2C 77-99%2C 112-134%2C 144-162%2C175-197%2C 217-239%2C 274-296%2C 306-325 and 332-354;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	1639740	1639808	.	+	.	ID=id2769;Note=9 probable transmembrane helices predicted for YE1459 by TMHMM2.0 at aa 30-52%2C 77-99%2C 112-134%2C 144-162%2C175-197%2C 217-239%2C 274-296%2C 306-325 and 332-354;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	1639911	1639979	.	+	.	ID=id2769;Note=9 probable transmembrane helices predicted for YE1459 by TMHMM2.0 at aa 30-52%2C 77-99%2C 112-134%2C 144-162%2C175-197%2C 217-239%2C 274-296%2C 306-325 and 332-354;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	1640007	1640066	.	+	.	ID=id2769;Note=9 probable transmembrane helices predicted for YE1459 by TMHMM2.0 at aa 30-52%2C 77-99%2C 112-134%2C 144-162%2C175-197%2C 217-239%2C 274-296%2C 306-325 and 332-354;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	1640085	1640153	.	+	.	ID=id2769;Note=9 probable transmembrane helices predicted for YE1459 by TMHMM2.0 at aa 30-52%2C 77-99%2C 112-134%2C 144-162%2C175-197%2C 217-239%2C 274-296%2C 306-325 and 332-354;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	1639191	1639223	.	+	.	ID=id2770;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1639245	1640156	.	+	.	ID=id2771;Note=Pfam match to entry PF01032 FecCD%2C FecCD transport family%2C score 287.5%2C E-value 1.1e-83;gbkey=misc_feature;inference=protein motif:PFAM:PF01032
AM286415.1	EMBL	gene	1640171	1640959	.	+	.	ID=gene1460;Name=YE1460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1460
AM286415.1	EMBL	CDS	1640171	1640959	.	+	0	ID=cds1402;Parent=gene1460;Dbxref=EnsemblGenomes-Gn:YE1460,EnsemblGenomes-Tr:CAL11550,GOA:A1JLZ2,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JLZ2,NCBI_GP:CAL11550.1;Name=CAL11550.1;gbkey=CDS;product=putative siderophore ABC transporter%2CATP-binding subunit;protein_id=CAL11550.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1640261	1640812	.	+	.	ID=id2772;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 171.3%2C E-value 1.1e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1640282	1640305	.	+	.	ID=id2773;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1640582	1640626	.	+	.	ID=id2774;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	1641282	1643156	.	+	.	ID=gene1461;Name=YE1461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1461
AM286415.1	EMBL	CDS	1641282	1643156	.	+	0	ID=cds1403;Parent=gene1461;Dbxref=EnsemblGenomes-Gn:YE1461,EnsemblGenomes-Tr:CAL11551,GOA:A1JLZ4,InterPro:IPR000531,InterPro:IPR012910,UniProtKB/TrEMBL:A1JLZ4,NCBI_GP:CAL11551.1;Name=CAL11551.1;gbkey=CDS;product=putative outer membrane protein;protein_id=CAL11551.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1641570	1641599	.	+	.	ID=id2775;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	1642848	1643153	.	+	.	ID=id2776;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 78.9%2C E-value 6.7e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	gene	1643551	1644171	.	-	.	ID=gene1462;Name=YE1463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1463
AM286415.1	EMBL	CDS	1643551	1644171	.	-	0	ID=cds1404;Parent=gene1462;Dbxref=EnsemblGenomes-Gn:YE1463,EnsemblGenomes-Tr:CAL11552,GOA:A1JLZ6,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012336,UniProtKB/TrEMBL:A1JLZ6,NCBI_GP:CAL11552.1;Name=CAL11552.1;gbkey=CDS;product=putative glutathione S-transferase-family protein;protein_id=CAL11552.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1643587	1643772	.	-	.	ID=id2777;Note=Pfam match to entry PF00043 GST_C%2C Glutathione S-transferase%2C C-terminal domain%2C score 13.9%2C E-value 0.00087;gbkey=misc_feature;inference=protein motif:PFAM:PF00043
AM286415.1	EMBL	sequence_feature	1643947	1644171	.	-	.	ID=id2778;Note=Pfam match to entry PF02798 GST_N%2C Glutathione S-transferase%2C N-terminal domain%2C score 47.6%2C E-value 1.8e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF02798
AM286415.1	EMBL	gene	1644190	1644849	.	-	.	ID=gene1463;Name=YE1464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1464
AM286415.1	EMBL	CDS	1644190	1644849	.	-	0	ID=cds1405;Parent=gene1463;Dbxref=EnsemblGenomes-Gn:YE1464,EnsemblGenomes-Tr:CAL11553,GOA:A1JLZ7,InterPro:IPR006383,InterPro:IPR006385,InterPro:IPR023214,UniProtKB/TrEMBL:A1JLZ7,NCBI_GP:CAL11553.1;Name=CAL11553.1;gbkey=CDS;product=putative hydrolase;protein_id=CAL11553.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1644250	1644849	.	-	.	ID=id2779;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 2.4%2C E-value 0.0059;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	1644685	1644717	.	-	.	ID=id2780;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1645367	1646377	.	+	.	ID=gene1464;Name=YE1465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1465
AM286415.1	EMBL	CDS	1645367	1646377	.	+	0	ID=cds1406;Parent=gene1464;Dbxref=EnsemblGenomes-Gn:YE1465,EnsemblGenomes-Tr:CAL11554,GOA:A1JM01,InterPro:IPR002283,InterPro:IPR005123,InterPro:IPR026992,InterPro:IPR027443,UniProtKB/TrEMBL:A1JM01,NCBI_GP:CAL11554.1;Name=CAL11554.1;gbkey=CDS;product=putative iron/ascorbate oxidoreductase family protein;protein_id=CAL11554.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1645865	1646170	.	+	.	ID=id2781;Note=Pfam match to entry PF03171 2OG-FeII_Oxy%2C2OG-Fe(II) oxygenase superfamily%2C score 103.7%2C E-value 2.3e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF03171
AM286415.1	EMBL	gene	1646430	1647254	.	+	.	ID=gene1465;Name=YE1466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1466
AM286415.1	EMBL	CDS	1646430	1647254	.	+	0	ID=cds1407;Parent=gene1465;Dbxref=EnsemblGenomes-Gn:YE1466,EnsemblGenomes-Tr:CAL11555,InterPro:IPR004872,UniProtKB/TrEMBL:A1JM02,NCBI_GP:CAL11555.1;Name=CAL11555.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11555.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1646520	1647239	.	+	.	ID=id2782;Note=Pfam match to entry PF03180 Lipoprotein_9%2C NLPA lipoprotein%2C score 350.6%2C E-value 1.1e-102;gbkey=misc_feature;inference=protein motif:PFAM:PF03180
AM286415.1	EMBL	gene	1647251	1648237	.	+	.	ID=gene1466;Name=YE1467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1467
AM286415.1	EMBL	CDS	1647251	1648237	.	+	0	ID=cds1408;Parent=gene1466;Dbxref=EnsemblGenomes-Gn:YE1467,EnsemblGenomes-Tr:CAL11556,GOA:A1JM05,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR017908,InterPro:IPR018449,InterPro:IPR026253,InterPro:IPR027417,UniProtKB/TrEMBL:A1JM05,NCBI_GP:CAL11556.1;Name=CAL11556.1;gbkey=CDS;product=putative ABC transport ATP-binding subunit;protein_id=CAL11556.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1647341	1647901	.	+	.	ID=id2783;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 231.7%2C E-value 6.8e-67;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1647362	1647385	.	+	.	ID=id2784;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1647671	1647715	.	+	.	ID=id2785;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	1648234	1648905	.	+	.	ID=gene1467;Name=YE1468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1468
AM286415.1	EMBL	CDS	1648234	1648905	.	+	0	ID=cds1409;Parent=gene1467;Dbxref=EnsemblGenomes-Gn:YE1468,EnsemblGenomes-Tr:CAL11557,GOA:A1JM07,InterPro:IPR000515,UniProtKB/TrEMBL:A1JM07,NCBI_GP:CAL11557.1;Name=CAL11557.1;gbkey=CDS;product=putative ABC transport integral membrane subunit;protein_id=CAL11557.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1648297	1648365	.	+	.	ID=id2786;Note=5 probable transmembrane helices predicted for YE1468 by TMHMM2.0 at aa 22-44%2C 65-87%2C 91-113%2C 151-173 and 193-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	1648426	1648494	.	+	.	ID=id2786;Note=5 probable transmembrane helices predicted for YE1468 by TMHMM2.0 at aa 22-44%2C 65-87%2C 91-113%2C 151-173 and 193-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	1648504	1648572	.	+	.	ID=id2786;Note=5 probable transmembrane helices predicted for YE1468 by TMHMM2.0 at aa 22-44%2C 65-87%2C 91-113%2C 151-173 and 193-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	1648684	1648752	.	+	.	ID=id2786;Note=5 probable transmembrane helices predicted for YE1468 by TMHMM2.0 at aa 22-44%2C 65-87%2C 91-113%2C 151-173 and 193-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	1648810	1648869	.	+	.	ID=id2786;Note=5 probable transmembrane helices predicted for YE1468 by TMHMM2.0 at aa 22-44%2C 65-87%2C 91-113%2C 151-173 and 193-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	1648579	1648791	.	+	.	ID=id2787;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 38.9%2C E-value 7.4e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	1649022	1650167	.	-	.	ID=gene1468;Name=uptH;gbkey=Gene;gene=uptH;gene_biotype=protein_coding;gene_synonym=metB;locus_tag=YE1469
AM286415.1	EMBL	CDS	1649022	1650167	.	-	0	ID=cds1410;Parent=gene1468;Dbxref=EnsemblGenomes-Gn:YE1469,EnsemblGenomes-Tr:CAL11558,GOA:A1JM12,InterPro:IPR000277,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JM12,NCBI_GP:CAL11558.1;Name=CAL11558.1;Note=Similar to Xanthomonas campestris cystathionine gamma-synthase UptH SWALL:Q93S80 (EMBL:AF204145) (399 aa) fasta scores: E(): 3.8e-91%2C 63.73 38d in 375 aa and to Helicobacter pylori cystathionine gamma-synthase MetB or hp0106 SWALL:METB_HELPY (SWALL:P56069) (380 aa) fasta scores: E(): 4.5e-71%2C 53.43 38d in 378 aa;gbkey=CDS;gene=uptH;inference=similar to sequence:UniProtKB:P56069;product=putative cystathionine gamma-synthase;protein_id=CAL11558.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1649028	1650155	.	-	.	ID=id2788;Note=Pfam match to entry PF01053 Cys_Met_Meta_PP%2CCys/Met metabolism PLP-dependent enzyme%2C score 805.8%2CE-value 1e-239;gbkey=misc_feature;gene=uptH;inference=protein motif:PFAM:PF01053
AM286415.1	EMBL	sequence_feature	1649562	1649606	.	-	.	ID=id2789;Note=PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=uptH;inference=protein motif:Prosite:PS00868
AM286415.1	EMBL	gene	1650193	1651560	.	-	.	ID=gene1469;Name=uptG;gbkey=Gene;gene=uptG;gene_biotype=protein_coding;locus_tag=YE1470
AM286415.1	EMBL	CDS	1650193	1651560	.	-	0	ID=cds1411;Parent=gene1469;Dbxref=EnsemblGenomes-Gn:YE1470,EnsemblGenomes-Tr:CAL11559,GOA:A1JM15,InterPro:IPR000644,InterPro:IPR001216,InterPro:IPR001926,UniProtKB/TrEMBL:A1JM15,NCBI_GP:CAL11559.1;Name=CAL11559.1;Note=Similar to Xanthomonas campestris cystathionine beta-lyase UptG SWALL:Q93S79 (EMBL:AF204145) (456 aa) fasta scores: E(): 3.4e-107%2C 60.22 38d in 455 aa and to Pseudomonas aeruginosa cystathionine beta-synthase Pa0399 SWALL:Q9I6A1 (EMBL:AE004477) (457 aa) fasta scores: E(): 1.1e-108%2C 62.22 38d in 450 aa;gbkey=CDS;gene=uptG;inference=similar to sequence:INSDC:AF204145;product=cystathionine beta-lyase;protein_id=CAL11559.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1650208	1650360	.	-	.	ID=id2790;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 26.4%2C E-value 4.3e-05;gbkey=misc_feature;gene=uptG;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1650394	1650552	.	-	.	ID=id2791;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 41.0%2C E-value 1.7e-09;gbkey=misc_feature;gene=uptG;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1650655	1651542	.	-	.	ID=id2792;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 341.3%2CE-value 6.8e-100;gbkey=misc_feature;gene=uptG;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	sequence_feature	1651411	1651467	.	-	.	ID=id2793;Note=PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site.;gbkey=misc_feature;gene=uptG;inference=protein motif:Prosite:PS00901
AM286415.1	EMBL	gene	1651953	1653170	.	+	.	ID=gene1470;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=YE1471
AM286415.1	EMBL	CDS	1651953	1653170	.	+	0	ID=cds1412;Parent=gene1470;Dbxref=EnsemblGenomes-Gn:YE1471,EnsemblGenomes-Tr:CAL11560,GOA:A1JM18,InterPro:IPR001967,InterPro:IPR012338,InterPro:IPR012907,InterPro:IPR015956,InterPro:IPR018044,UniProtKB/TrEMBL:A1JM18,NCBI_GP:CAL11560.1;Name=CAL11560.1;gbkey=CDS;gene=dacC;product=D-alanyl-D-alanine carboxypeptidase;protein_id=CAL11560.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1652058	1652840	.	+	.	ID=id2794;Note=Pfam match to entry PF00768 Peptidase_S11%2CD-alanyl-D-alanine carboxypeptidase%2C score 498.8%2C E-value 2.8e-147;gbkey=misc_feature;gene=dacC;inference=protein motif:PFAM:PF00768
AM286415.1	EMBL	gene	1653406	1654773	.	-	.	ID=gene1471;Name=sdaB;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=YE1472
AM286415.1	EMBL	CDS	1653406	1654773	.	-	0	ID=cds1413;Parent=gene1471;Dbxref=EnsemblGenomes-Gn:YE1472,EnsemblGenomes-Tr:CAL11561,GOA:A1JM23,InterPro:IPR004644,InterPro:IPR005130,InterPro:IPR005131,InterPro:IPR029009,UniProtKB/TrEMBL:A1JM23,NCBI_GP:CAL11561.1;Name=CAL11561.1;Note=Similar to Escherichia coli L-serine dehydratase 2 SdaB or b2797 SWALL:SDHM_ECOLI (SWALL:P30744) (455 aa) fasta scores: E(): 6.7e-151%2C 81.31 38d in 455 aa and to Escherichia coli L-serine dehydratase 1 SdaA or b1814 SWALL:SDHL_ECOLI (SWALL:P16095) (454 aa) fasta scores: E(): 5.8e-145%2C 76.92 38d in 455 aa. Note this CDS is also highly similar to YE1779 76.044 38dentity in 455 aa overlap;gbkey=CDS;gene=sdaB;inference=similar to sequence:UniProtKB:P30744;product=L-serine dehydratase 2;protein_id=CAL11561.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1653424	1654263	.	-	.	ID=id2795;Note=Pfam match to entry PF03313 SDH_alpha%2C Serine dehydratase alpha chain%2C score 664.9%2C E-value 2.7e-197;gbkey=misc_feature;gene=sdaB;inference=protein motif:PFAM:PF03313
AM286415.1	EMBL	sequence_feature	1654279	1654773	.	-	.	ID=id2796;Note=Pfam match to entry PF03315 SDH_beta%2C Serine dehydratase beta chain%2C score 319.2%2C E-value 3.1e-93;gbkey=misc_feature;gene=sdaB;inference=protein motif:PFAM:PF03315
AM286415.1	EMBL	gene	1654919	1656214	.	-	.	ID=gene1472;Name=sdaC;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;gene_synonym=b2796,dcrA;locus_tag=YE1473
AM286415.1	EMBL	CDS	1654919	1656214	.	-	0	ID=cds1414;Parent=gene1472;Dbxref=EnsemblGenomes-Gn:YE1473,EnsemblGenomes-Tr:CAL11562,GOA:A1JM27,InterPro:IPR004694,InterPro:IPR018227,UniProtKB/TrEMBL:A1JM27,NCBI_GP:CAL11562.1;Name=CAL11562.1;gbkey=CDS;gene=sdaC;product=serine transporter;protein_id=CAL11562.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1656086	1656139	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1656008	1656076	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1655849	1655908	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1655738	1655791	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1655651	1655719	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1655525	1655593	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1655396	1655464	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1655246	1655314	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1655093	1655161	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1655030	1655083	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1654925	1654993	.	-	.	ID=id2797;Note=11 probable transmembrane helices predicted for YE1473 by TMHMM2.0 at aa 26-43%2C 47-69%2C 103-122%2C 142-159%2C166-188%2C 208-230%2C 251-273%2C 301-323%2C 352-374%2C 378-395 and 408-430;gbkey=misc_feature;gene=sdaC;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	1655405	1655437	.	-	.	ID=id2798;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=sdaC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1657474	1658238	.	-	.	ID=gene1473;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;gene_synonym=nucR;locus_tag=YE1474
AM286415.1	EMBL	CDS	1657474	1658238	.	-	0	ID=cds1415;Parent=gene1473;Dbxref=EnsemblGenomes-Gn:YE1474,EnsemblGenomes-Tr:CAL11563,GOA:A1JM35,InterPro:IPR001034,InterPro:IPR014036,InterPro:IPR018356,UniProtKB/TrEMBL:A1JM35,NCBI_GP:CAL11563.1;Name=CAL11563.1;gbkey=CDS;gene=deoR;product=deoxyribose operon repressor;protein_id=CAL11563.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1657537	1658217	.	-	.	ID=id2799;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 255.9%2C E-value 3.7e-74;gbkey=misc_feature;gene=deoR;inference=protein motif:PFAM:PF00455
AM286415.1	EMBL	sequence_feature	1658110	1658175	.	-	.	ID=id2800;Note=Predicted helix-turn-helix motif with score 1500.000%2C SD 4.30 at aa 22-43%2C sequence IHLKDAANLLRVSEMTIRRDLS;gbkey=misc_feature;gene=deoR
AM286415.1	EMBL	sequence_feature	1658113	1658217	.	-	.	ID=id2801;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;gbkey=misc_feature;gene=deoR;inference=protein motif:Prosite:PS00894
AM286415.1	EMBL	gene	1658556	1659227	.	-	.	ID=gene1474;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;gene_synonym=dra;locus_tag=YE1475
AM286415.1	EMBL	CDS	1658556	1659227	.	-	0	ID=cds1416;Parent=gene1474;Dbxref=EnsemblGenomes-Gn:YE1475,EnsemblGenomes-Tr:CAL11564,GOA:A1JM38,InterPro:IPR002915,InterPro:IPR011343,InterPro:IPR013785,InterPro:IPR028581,NCBI_GP:CAL11564.1;Name=CAL11564.1;gbkey=CDS;gene=deoC;product=putative deoxyribose-phosphate aldolase;protein_id=CAL11564.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1658586	1659221	.	-	.	ID=id2802;Note=Pfam match to entry PF01791 DeoC%2CDeoxyribose-phosphate aldolase%2C score 336.3%2C E-value 2.3e-98;gbkey=misc_feature;gene=deoC;inference=protein motif:PFAM:PF01791
AM286415.1	EMBL	gene	1659502	1660098	.	-	.	ID=gene1475;Name=YE1476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1476
AM286415.1	EMBL	CDS	1659502	1660098	.	-	0	ID=cds1417;Parent=gene1475;Dbxref=EnsemblGenomes-Gn:YE1476,EnsemblGenomes-Tr:CAL11565,GOA:A1JM40,InterPro:IPR000326,UniProtKB/TrEMBL:A1JM40,NCBI_GP:CAL11565.1;Name=CAL11565.1;gbkey=CDS;product=putative permease;protein_id=CAL11565.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1659580	1660020	.	-	.	ID=id2803;Note=Pfam match to entry PF01569 PAP2%2C PAP2 superfamily%2C score 105.9%2C E-value 5.1e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF01569
AM286415.1	EMBL	sequence_feature	1659967	1660035	.	-	.	ID=id2804;Note=5 probable transmembrane helices predicted for YE1476 by TMHMM2.0 at aa 22-44%2C 56-78%2C 101-118%2C 123-140 and 150-172;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	1659865	1659933	.	-	.	ID=id2804;Note=5 probable transmembrane helices predicted for YE1476 by TMHMM2.0 at aa 22-44%2C 56-78%2C 101-118%2C 123-140 and 150-172;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	1659745	1659798	.	-	.	ID=id2804;Note=5 probable transmembrane helices predicted for YE1476 by TMHMM2.0 at aa 22-44%2C 56-78%2C 101-118%2C 123-140 and 150-172;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	1659679	1659732	.	-	.	ID=id2804;Note=5 probable transmembrane helices predicted for YE1476 by TMHMM2.0 at aa 22-44%2C 56-78%2C 101-118%2C 123-140 and 150-172;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	1659583	1659651	.	-	.	ID=id2804;Note=5 probable transmembrane helices predicted for YE1476 by TMHMM2.0 at aa 22-44%2C 56-78%2C 101-118%2C 123-140 and 150-172;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	1659616	1659648	.	-	.	ID=id2805;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1659880	1659912	.	-	.	ID=id2806;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1660107	1660877	.	-	.	ID=gene1476;Name=YE1477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1477
AM286415.1	EMBL	CDS	1660107	1660877	.	-	0	ID=cds1418;Parent=gene1476;Dbxref=EnsemblGenomes-Gn:YE1477,EnsemblGenomes-Tr:CAL11566,GOA:A1JM43,InterPro:IPR000326,UniProtKB/TrEMBL:A1JM43,NCBI_GP:CAL11566.1;Name=CAL11566.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11566.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1660710	1660778	.	-	.	ID=id2807;Note=6 probable transmembrane helices predicted for YE1477 by TMHMM2.0 at aa 34-56%2C 88-110%2C 117-139%2C 172-191%2C198-218 and 228-250;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1660548	1660616	.	-	.	ID=id2807;Note=6 probable transmembrane helices predicted for YE1477 by TMHMM2.0 at aa 34-56%2C 88-110%2C 117-139%2C 172-191%2C198-218 and 228-250;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1660461	1660529	.	-	.	ID=id2807;Note=6 probable transmembrane helices predicted for YE1477 by TMHMM2.0 at aa 34-56%2C 88-110%2C 117-139%2C 172-191%2C198-218 and 228-250;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1660305	1660364	.	-	.	ID=id2807;Note=6 probable transmembrane helices predicted for YE1477 by TMHMM2.0 at aa 34-56%2C 88-110%2C 117-139%2C 172-191%2C198-218 and 228-250;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1660224	1660286	.	-	.	ID=id2807;Note=6 probable transmembrane helices predicted for YE1477 by TMHMM2.0 at aa 34-56%2C 88-110%2C 117-139%2C 172-191%2C198-218 and 228-250;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1660128	1660196	.	-	.	ID=id2807;Note=6 probable transmembrane helices predicted for YE1477 by TMHMM2.0 at aa 34-56%2C 88-110%2C 117-139%2C 172-191%2C198-218 and 228-250;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	transcript	1660972	1661052	.	-	.	ID=rna72;Note=RybB RNA (RF00110) as predicted by Rfam%2C score 40.11%2C positions 1 to 79;gbkey=misc_RNA
AM286415.1	EMBL	exon	1660972	1661052	.	-	.	ID=id2808;Parent=rna72;Note=RybB RNA (RF00110) as predicted by Rfam%2C score 40.11%2C positions 1 to 79;gbkey=misc_RNA
AM286415.1	EMBL	gene	1661151	1662839	.	-	.	ID=gene1477;Name=YE1478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1478
AM286415.1	EMBL	CDS	1661151	1662839	.	-	0	ID=cds1419;Parent=gene1477;Dbxref=EnsemblGenomes-Gn:YE1478,EnsemblGenomes-Tr:CAL11567,GOA:A1JM45,InterPro:IPR006037,InterPro:IPR006512,InterPro:IPR023017,NCBI_GP:CAL11567.1;Name=CAL11567.1;gbkey=CDS;product=TrkA%2C Potassium channel-family protein;protein_id=CAL11567.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1662735	1662803	.	-	.	ID=id2809;Note=10 probable transmembrane helices predicted for YE1478 by TMHMM2.0 at aa 13-35%2C 64-86%2C 93-111%2C 116-138%2C159-181%2C 379-401%2C 408-427%2C 447-469%2C 476-498 and 539-561;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1662582	1662650	.	-	.	ID=id2809;Note=10 probable transmembrane helices predicted for YE1478 by TMHMM2.0 at aa 13-35%2C 64-86%2C 93-111%2C 116-138%2C159-181%2C 379-401%2C 408-427%2C 447-469%2C 476-498 and 539-561;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1662507	1662563	.	-	.	ID=id2809;Note=10 probable transmembrane helices predicted for YE1478 by TMHMM2.0 at aa 13-35%2C 64-86%2C 93-111%2C 116-138%2C159-181%2C 379-401%2C 408-427%2C 447-469%2C 476-498 and 539-561;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1662426	1662494	.	-	.	ID=id2809;Note=10 probable transmembrane helices predicted for YE1478 by TMHMM2.0 at aa 13-35%2C 64-86%2C 93-111%2C 116-138%2C159-181%2C 379-401%2C 408-427%2C 447-469%2C 476-498 and 539-561;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1662297	1662365	.	-	.	ID=id2809;Note=10 probable transmembrane helices predicted for YE1478 by TMHMM2.0 at aa 13-35%2C 64-86%2C 93-111%2C 116-138%2C159-181%2C 379-401%2C 408-427%2C 447-469%2C 476-498 and 539-561;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1661637	1661705	.	-	.	ID=id2809;Note=10 probable transmembrane helices predicted for YE1478 by TMHMM2.0 at aa 13-35%2C 64-86%2C 93-111%2C 116-138%2C159-181%2C 379-401%2C 408-427%2C 447-469%2C 476-498 and 539-561;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1661559	1661618	.	-	.	ID=id2809;Note=10 probable transmembrane helices predicted for YE1478 by TMHMM2.0 at aa 13-35%2C 64-86%2C 93-111%2C 116-138%2C159-181%2C 379-401%2C 408-427%2C 447-469%2C 476-498 and 539-561;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1661433	1661501	.	-	.	ID=id2809;Note=10 probable transmembrane helices predicted for YE1478 by TMHMM2.0 at aa 13-35%2C 64-86%2C 93-111%2C 116-138%2C159-181%2C 379-401%2C 408-427%2C 447-469%2C 476-498 and 539-561;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1661346	1661414	.	-	.	ID=id2809;Note=10 probable transmembrane helices predicted for YE1478 by TMHMM2.0 at aa 13-35%2C 64-86%2C 93-111%2C 116-138%2C159-181%2C 379-401%2C 408-427%2C 447-469%2C 476-498 and 539-561;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1661157	1661225	.	-	.	ID=id2809;Note=10 probable transmembrane helices predicted for YE1478 by TMHMM2.0 at aa 13-35%2C 64-86%2C 93-111%2C 116-138%2C159-181%2C 379-401%2C 408-427%2C 447-469%2C 476-498 and 539-561;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	1661718	1661957	.	-	.	ID=id2810;Note=Pfam match to entry PF02080 TrkA-C%2C TrkA-C domain %2Cscore 39.1%2C E-value 6.5e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF02080
AM286415.1	EMBL	sequence_feature	1661970	1662230	.	-	.	ID=id2811;Note=Pfam match to entry PF02080 TrkA-C%2C TrkA-C domain %2Cscore 62.7%2C E-value 5.1e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF02080
AM286415.1	EMBL	gene	1663249	1663512	.	-	.	ID=gene1478;Name=grxA;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=YE1479
AM286415.1	EMBL	CDS	1663249	1663512	.	-	0	ID=cds1420;Parent=gene1478;Dbxref=EnsemblGenomes-Gn:YE1479,EnsemblGenomes-Tr:CAL11568,GOA:A1JM48,InterPro:IPR002109,InterPro:IPR011767,InterPro:IPR011902,InterPro:IPR012336,InterPro:IPR014025,UniProtKB/TrEMBL:A1JM48,NCBI_GP:CAL11568.1;Name=CAL11568.1;gbkey=CDS;gene=grxA;product=glutaredoxin 1;protein_id=CAL11568.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1663315	1663509	.	-	.	ID=id2812;Note=Pfam match to entry PF00462 glutaredoxin%2CGlutaredoxin%2C score 88.7%2C E-value 7.4e-24;gbkey=misc_feature;gene=grxA;inference=protein motif:PFAM:PF00462
AM286415.1	EMBL	sequence_feature	1663321	1663386	.	-	.	ID=id2813;Note=Predicted helix-turn-helix motif with score 990.000%2C SD 2.56 at aa 43-64%2C sequence ITKADLEKTVGKPVETVPQIFI;gbkey=misc_feature;gene=grxA
AM286415.1	EMBL	sequence_feature	1663453	1663500	.	-	.	ID=id2814;Note=PS00195 Glutaredoxin active site.;gbkey=misc_feature;gene=grxA;inference=protein motif:Prosite:PS00195
AM286415.1	EMBL	gene	1663827	1664135	.	+	.	ID=gene1479;Name=YE1481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1481
AM286415.1	EMBL	CDS	1663827	1664135	.	+	0	ID=cds1421;Parent=gene1479;Dbxref=EnsemblGenomes-Gn:YE1481,EnsemblGenomes-Tr:CAL11569,InterPro:IPR010815,UniProtKB/TrEMBL:A1JM54,NCBI_GP:CAL11569.1;Name=CAL11569.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11569.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1663845	1663913	.	+	.	ID=id2815;Note=2 probable transmembrane helices predicted for YE1481 by TMHMM2.0 at aa 7-29 and 44-66;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1663956	1664024	.	+	.	ID=id2815;Note=2 probable transmembrane helices predicted for YE1481 by TMHMM2.0 at aa 7-29 and 44-66;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	1663848	1663895	.	+	.	ID=id2816;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00038
AM286415.1	EMBL	gene	1664254	1664739	.	+	.	ID=gene1480;Name=YE1483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1483
AM286415.1	EMBL	CDS	1664254	1664739	.	+	0	ID=cds1422;Parent=gene1480;Dbxref=EnsemblGenomes-Gn:YE1483,EnsemblGenomes-Tr:CAL11570,InterPro:IPR019660,UniProtKB/TrEMBL:A1JM58,NCBI_GP:CAL11570.1;Name=CAL11570.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11570.1;transl_table=11
AM286415.1	EMBL	gene	1665185	1666294	.	+	.	ID=gene1481;Name=potF;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=YE1484
AM286415.1	EMBL	CDS	1665185	1666294	.	+	0	ID=cds1423;Parent=gene1481;Dbxref=EnsemblGenomes-Gn:YE1484,EnsemblGenomes-Tr:CAL11571,GOA:A1JM59,InterPro:IPR001188,UniProtKB/TrEMBL:A1JM59,NCBI_GP:CAL11571.1;Name=CAL11571.1;gbkey=CDS;gene=potF;product=putrescine-binding periplasmic protein precursor;protein_id=CAL11571.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1665290	1666285	.	+	.	ID=id2817;Note=Pfam match to entry PF01547 SBP_bac_1%2C Bacterial extracellular solute-binding protein%2C score 77.4%2C E-value 1.9e-20;gbkey=misc_feature;gene=potF;inference=protein motif:PFAM:PF01547
AM286415.1	EMBL	gene	1666461	1667594	.	+	.	ID=gene1482;Name=potG;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=YE1485
AM286415.1	EMBL	CDS	1666461	1667594	.	+	0	ID=cds1424;Parent=gene1482;Dbxref=EnsemblGenomes-Gn:YE1485,EnsemblGenomes-Tr:CAL11572,GOA:A1JM61,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005893,InterPro:IPR008995,InterPro:IPR013611,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JM61,NCBI_GP:CAL11572.1;Name=CAL11572.1;gbkey=CDS;gene=potG;product=putrescine transport ATP-binding protein;protein_id=CAL11572.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1666593	1667138	.	+	.	ID=id2818;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 244.4%2C E-value 1e-70;gbkey=misc_feature;gene=potG;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1666614	1666637	.	+	.	ID=id2819;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=potG;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1666908	1666952	.	+	.	ID=id2820;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=potG;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1667388	1667582	.	+	.	ID=id2821;Note=Pfam match to entry PF03459 TOBE%2C TOBE domain %2Cscore 23.8%2C E-value 2.1e-06;gbkey=misc_feature;gene=potG;inference=protein motif:PFAM:PF03459
AM286415.1	EMBL	gene	1667631	1668596	.	+	.	ID=gene1483;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=YE1486
AM286415.1	EMBL	CDS	1667631	1668596	.	+	0	ID=cds1425;Parent=gene1483;Dbxref=EnsemblGenomes-Gn:YE1486,EnsemblGenomes-Tr:CAL11573,GOA:A1JM64,InterPro:IPR000515,UniProtKB/TrEMBL:A1JM64,NCBI_GP:CAL11573.1;Name=CAL11573.1;gbkey=CDS;gene=potH;product=putrescine transport system permease protein;protein_id=CAL11573.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1667721	1667753	.	+	.	ID=id2822;Note=PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature.;gbkey=misc_feature;gene=potH;inference=protein motif:Prosite:PS00133
AM286415.1	EMBL	sequence_feature	1667730	1667798	.	+	.	ID=id2823;Note=6 probable transmembrane helices predicted for YE1486 by TMHMM2.0 at aa 34-56%2C 104-126%2C 139-161%2C 189-211%2C232-254 and 288-310;gbkey=misc_feature;gene=potH;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1667940	1668008	.	+	.	ID=id2823;Note=6 probable transmembrane helices predicted for YE1486 by TMHMM2.0 at aa 34-56%2C 104-126%2C 139-161%2C 189-211%2C232-254 and 288-310;gbkey=misc_feature;gene=potH;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1668045	1668113	.	+	.	ID=id2823;Note=6 probable transmembrane helices predicted for YE1486 by TMHMM2.0 at aa 34-56%2C 104-126%2C 139-161%2C 189-211%2C232-254 and 288-310;gbkey=misc_feature;gene=potH;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1668195	1668263	.	+	.	ID=id2823;Note=6 probable transmembrane helices predicted for YE1486 by TMHMM2.0 at aa 34-56%2C 104-126%2C 139-161%2C 189-211%2C232-254 and 288-310;gbkey=misc_feature;gene=potH;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1668324	1668392	.	+	.	ID=id2823;Note=6 probable transmembrane helices predicted for YE1486 by TMHMM2.0 at aa 34-56%2C 104-126%2C 139-161%2C 189-211%2C232-254 and 288-310;gbkey=misc_feature;gene=potH;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1668492	1668560	.	+	.	ID=id2823;Note=6 probable transmembrane helices predicted for YE1486 by TMHMM2.0 at aa 34-56%2C 104-126%2C 139-161%2C 189-211%2C232-254 and 288-310;gbkey=misc_feature;gene=potH;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1668258	1668479	.	+	.	ID=id2824;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 85.1%2C E-value 9.3e-23;gbkey=misc_feature;gene=potH;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	1668261	1668347	.	+	.	ID=id2825;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=potH;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	1668593	1669438	.	+	.	ID=gene1484;Name=potI;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=YE1487
AM286415.1	EMBL	CDS	1668593	1669438	.	+	0	ID=cds1426;Parent=gene1484;Dbxref=EnsemblGenomes-Gn:YE1487,EnsemblGenomes-Tr:CAL11574,GOA:A1JM69,InterPro:IPR000515,UniProtKB/TrEMBL:A1JM69,NCBI_GP:CAL11574.1;Name=CAL11574.1;gbkey=CDS;gene=potI;product=putrescine transport system permease protein;protein_id=CAL11574.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1668629	1668697	.	+	.	ID=id2826;Note=7 probable transmembrane helices predicted for YE1487 by TMHMM2.0 at aa 13-35%2C 69-91%2C 104-126%2C 141-163%2C184-203%2C 213-235 and 242-264;gbkey=misc_feature;gene=potI;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1668797	1668865	.	+	.	ID=id2826;Note=7 probable transmembrane helices predicted for YE1487 by TMHMM2.0 at aa 13-35%2C 69-91%2C 104-126%2C 141-163%2C184-203%2C 213-235 and 242-264;gbkey=misc_feature;gene=potI;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1668902	1668970	.	+	.	ID=id2826;Note=7 probable transmembrane helices predicted for YE1487 by TMHMM2.0 at aa 13-35%2C 69-91%2C 104-126%2C 141-163%2C184-203%2C 213-235 and 242-264;gbkey=misc_feature;gene=potI;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1669013	1669081	.	+	.	ID=id2826;Note=7 probable transmembrane helices predicted for YE1487 by TMHMM2.0 at aa 13-35%2C 69-91%2C 104-126%2C 141-163%2C184-203%2C 213-235 and 242-264;gbkey=misc_feature;gene=potI;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1669142	1669201	.	+	.	ID=id2826;Note=7 probable transmembrane helices predicted for YE1487 by TMHMM2.0 at aa 13-35%2C 69-91%2C 104-126%2C 141-163%2C184-203%2C 213-235 and 242-264;gbkey=misc_feature;gene=potI;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1669229	1669297	.	+	.	ID=id2826;Note=7 probable transmembrane helices predicted for YE1487 by TMHMM2.0 at aa 13-35%2C 69-91%2C 104-126%2C 141-163%2C184-203%2C 213-235 and 242-264;gbkey=misc_feature;gene=potI;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1669316	1669384	.	+	.	ID=id2826;Note=7 probable transmembrane helices predicted for YE1487 by TMHMM2.0 at aa 13-35%2C 69-91%2C 104-126%2C 141-163%2C184-203%2C 213-235 and 242-264;gbkey=misc_feature;gene=potI;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	1669076	1669297	.	+	.	ID=id2827;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 46.6%2C E-value 3.5e-11;gbkey=misc_feature;gene=potI;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	1669079	1669165	.	+	.	ID=id2828;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=potI;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	sequence_feature	1669328	1669432	.	+	.	ID=id2829;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 21.1%2C E-value 2.1e-05;gbkey=misc_feature;gene=potI;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	pseudogene	1669588	1670066	.	+	.	ID=gene1485;Name=YE1488;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1488;pseudo=true
AM286415.1	EMBL	CDS	1669588	1669830	.	+	0	ID=cds1427;Parent=gene1485;Dbxref=PSEUDO:CAL11575.1;Note=Similar to many proteins of undefined function including: Yersinia pestis putative membrane protein Ypo1335 SWALL:Q8ZGG2 (EMBL:AJ414147) (154 aa) fasta scores: E(): 6e-44%2C 72 38d in 150 aa%2C Salmonella typhi putative membrane protein Sty0914 SWALL:Q8Z842 (EMBL:AL627268) (157 aa) fasta scores: E(): 9.4e-19%2C40.64 38d in 155 aa and Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YbjO or b0858 or z1085 or ecs0938 SWALL:YBJO_ECOLI (SWALL:P75816) (162 aa) fasta scores: E(): 4.7e-17%2C 38.85 38d in 157 aa. Note this CDS contains a frameshift mutation following codon 81;gbkey=CDS;inference=similar to sequence:UniProtKB:P75816;product=putative inner membrane protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1669833	1670066	.	+	0	ID=cds1427;Parent=gene1485;Dbxref=PSEUDO:CAL11575.1;Note=Similar to many proteins of undefined function including: Yersinia pestis putative membrane protein Ypo1335 SWALL:Q8ZGG2 (EMBL:AJ414147) (154 aa) fasta scores: E(): 6e-44%2C 72 38d in 150 aa%2C Salmonella typhi putative membrane protein Sty0914 SWALL:Q8Z842 (EMBL:AL627268) (157 aa) fasta scores: E(): 9.4e-19%2C40.64 38d in 155 aa and Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YbjO or b0858 or z1085 or ecs0938 SWALL:YBJO_ECOLI (SWALL:P75816) (162 aa) fasta scores: E(): 4.7e-17%2C 38.85 38d in 157 aa. Note this CDS contains a frameshift mutation following codon 81;gbkey=CDS;inference=similar to sequence:UniProtKB:P75816;product=putative inner membrane protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1669645	1669713	.	+	.	ID=id2830;Note=2 probable transmembrane helices predicted for YE1488 by TMHMM2.0 at aa 20-42 and 62-84;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1669771	1669839	.	+	.	ID=id2830;Note=2 probable transmembrane helices predicted for YE1488 by TMHMM2.0 at aa 20-42 and 62-84;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	1669825	1669848	.	+	.	ID=id2831;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	signal_peptide	1669588	1669656	.	+	.	ID=id2832;Note=Signal peptide predicted for YE1488 by SignalP 2.0 HMM (Signal peptide probabilty 0.945) with cleavage site probability 0.766 between residues 23 and 24;gbkey=sig_peptide;pseudo=true
AM286415.1	EMBL	gene	1670155	1671282	.	+	.	ID=gene1486;Name=YE1490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1490
AM286415.1	EMBL	CDS	1670155	1671282	.	+	0	ID=cds1428;Parent=gene1486;Dbxref=EnsemblGenomes-Gn:YE1490,EnsemblGenomes-Tr:CAL11576,GOA:A1JM74,InterPro:IPR001566,InterPro:IPR010280,InterPro:IPR011825,InterPro:IPR029063,NCBI_GP:CAL11576.1;Name=CAL11576.1;gbkey=CDS;product=putative RNA methyltransferase;protein_id=CAL11576.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1671073	1671168	.	+	.	ID=id2833;Note=PS01230 RNA methyltransferase trmA family signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS01230
AM286415.1	EMBL	sequence_feature	1671223	1671255	.	+	.	ID=id2834;Note=PS01231 RNA methyltransferase trmA family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01231
AM286415.1	EMBL	gene	1671408	1672157	.	-	.	ID=gene1487;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=YE1491
AM286415.1	EMBL	CDS	1671408	1672157	.	-	0	ID=cds1429;Parent=gene1487;Dbxref=EnsemblGenomes-Gn:YE1491,EnsemblGenomes-Tr:CAL11577,GOA:A1JM75,InterPro:IPR001638,InterPro:IPR005768,InterPro:IPR018313,UniProtKB/TrEMBL:A1JM75,NCBI_GP:CAL11577.1;Name=CAL11577.1;gbkey=CDS;gene=artJ;product=arginine-binding periplasmic protein 2 precursor;protein_id=CAL11577.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1671411	1671998	.	-	.	ID=id2835;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 221.8%2C E-value 6.4e-64;gbkey=misc_feature;gene=artJ;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	gene	1672976	1673644	.	-	.	ID=gene1488;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=YE1493
AM286415.1	EMBL	CDS	1672976	1673644	.	-	0	ID=cds1430;Parent=gene1488;Dbxref=EnsemblGenomes-Gn:YE1493,EnsemblGenomes-Tr:CAL11578,GOA:A1JM76,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JM76,NCBI_GP:CAL11578.1;Name=CAL11578.1;gbkey=CDS;gene=artM;product=arginine transport system permease protein;protein_id=CAL11578.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1673534	1673602	.	-	.	ID=id2836;Note=5 probable transmembrane helices predicted for YE1493 by TMHMM2.0 at aa 15-37%2C 50-72%2C 92-114%2C 155-174 and 189-211;gbkey=misc_feature;gene=artM;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	1673429	1673497	.	-	.	ID=id2836;Note=5 probable transmembrane helices predicted for YE1493 by TMHMM2.0 at aa 15-37%2C 50-72%2C 92-114%2C 155-174 and 189-211;gbkey=misc_feature;gene=artM;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	1673303	1673371	.	-	.	ID=id2836;Note=5 probable transmembrane helices predicted for YE1493 by TMHMM2.0 at aa 15-37%2C 50-72%2C 92-114%2C 155-174 and 189-211;gbkey=misc_feature;gene=artM;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	1673123	1673182	.	-	.	ID=id2836;Note=5 probable transmembrane helices predicted for YE1493 by TMHMM2.0 at aa 15-37%2C 50-72%2C 92-114%2C 155-174 and 189-211;gbkey=misc_feature;gene=artM;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	1673012	1673080	.	-	.	ID=id2836;Note=5 probable transmembrane helices predicted for YE1493 by TMHMM2.0 at aa 15-37%2C 50-72%2C 92-114%2C 155-174 and 189-211;gbkey=misc_feature;gene=artM;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	1673078	1673308	.	-	.	ID=id2837;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 25.5%2C E-value 8e-05;gbkey=misc_feature;gene=artM;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	1673644	1674360	.	-	.	ID=gene1489;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=YE1494
AM286415.1	EMBL	CDS	1673644	1674360	.	-	0	ID=cds1431;Parent=gene1489;Dbxref=EnsemblGenomes-Gn:YE1494,EnsemblGenomes-Tr:CAL11579,GOA:A1JM78,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JM78,NCBI_GP:CAL11579.1;Name=CAL11579.1;gbkey=CDS;gene=artQ;product=arginine transport system permease protein;protein_id=CAL11579.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1674265	1674333	.	-	.	ID=id2838;Note=4 probable transmembrane helices predicted for YE1494 by TMHMM2.0 at aa 10-32%2C 53-75%2C 101-118 and 201-223;gbkey=misc_feature;gene=artQ;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1674136	1674204	.	-	.	ID=id2838;Note=4 probable transmembrane helices predicted for YE1494 by TMHMM2.0 at aa 10-32%2C 53-75%2C 101-118 and 201-223;gbkey=misc_feature;gene=artQ;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1674007	1674060	.	-	.	ID=id2838;Note=4 probable transmembrane helices predicted for YE1494 by TMHMM2.0 at aa 10-32%2C 53-75%2C 101-118 and 201-223;gbkey=misc_feature;gene=artQ;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1673692	1673760	.	-	.	ID=id2838;Note=4 probable transmembrane helices predicted for YE1494 by TMHMM2.0 at aa 10-32%2C 53-75%2C 101-118 and 201-223;gbkey=misc_feature;gene=artQ;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	1673752	1673985	.	-	.	ID=id2839;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 56.0%2C E-value 5.5e-14;gbkey=misc_feature;gene=artQ;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	1673896	1673982	.	-	.	ID=id2840;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=artQ;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	1674372	1675103	.	-	.	ID=gene1490;Name=artI;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=YE1495
AM286415.1	EMBL	CDS	1674372	1675103	.	-	0	ID=cds1432;Parent=gene1490;Dbxref=EnsemblGenomes-Gn:YE1495,EnsemblGenomes-Tr:CAL11580,GOA:A1JM82,InterPro:IPR001638,InterPro:IPR005768,InterPro:IPR018313,UniProtKB/TrEMBL:A1JM82,NCBI_GP:CAL11580.1;Name=CAL11580.1;gbkey=CDS;gene=artI;product=arginine-binding periplasmic protein 1 precursor;protein_id=CAL11580.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1674375	1675037	.	-	.	ID=id2841;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 308.7%2C E-value 4.6e-90;gbkey=misc_feature;gene=artI;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	sequence_feature	1674930	1674971	.	-	.	ID=id2842;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;gbkey=misc_feature;gene=artI;inference=protein motif:Prosite:PS01039
AM286415.1	EMBL	gene	1675124	1675852	.	-	.	ID=gene1491;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=YE1496
AM286415.1	EMBL	CDS	1675124	1675852	.	-	0	ID=cds1433;Parent=gene1491;Dbxref=EnsemblGenomes-Gn:YE1496,EnsemblGenomes-Tr:CAL11581,GOA:A1JM86,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JM86,NCBI_GP:CAL11581.1;Name=CAL11581.1;gbkey=CDS;gene=artP;product=arginine transport ATP-binding protein;protein_id=CAL11581.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1675202	1675771	.	-	.	ID=id2843;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 254.3%2C E-value 1.1e-73;gbkey=misc_feature;gene=artP;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1675385	1675429	.	-	.	ID=id2844;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=artP;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1675727	1675750	.	-	.	ID=id2845;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=artP;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	repeat_region	1676067	1676185	.	-	.	ID=id2846;Note=98 38dentity to 123 bp repeat: repeat:CCGACAACACCCCTGCAATTTGAAAGAAAATGAGTCTCTCCTATAGATTT CGGATTGCAGGTAGGCGGCAAAAGAGTGCATCCCGATGAGCTTACACTGGTAAGTGA TTCGGGTAAGCGAGAG;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	1676190	1676312	.	-	.	ID=id2847;Note=95 38dentity to 123 bp repeat: repeat:CCGACAACACCCCTGCAATTTGAAAGAAAATGAGTCTCTCCTATAGATTT CGGATTGCAGGTAGGCGGCAAAAGAGTGCATCCCGATGAGCTTACACTGGTAAGTGA TTCGGGTAAGCGAGAG;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	1676313	1676431	.	-	.	ID=id2848;Note=98 38dentity to 123 bp repeat: repeat:CCGACAACACCCCTGCAATTTGAAAGAAAATGAGTCTCTCCTATAGATTT CGGATTGCAGGTAGGCGGCAAAAGAGTGCATCCCGATGAGCTTACACTGGTAAGTGA TTCGGGTAAGCGAGAG;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	1676436	1676558	.	-	.	ID=id2849;Note=96 38dentity to 123 bp repeat: repeat:CCGACAACACCCCTGCAATTTGAAAGAAAATGAGTCTCTCCTATAGATTT CGGATTGCAGGTAGGCGGCAAAAGAGTGCATCCCGATGAGCTTACACTGGTAAGTGA TTCGGGTAAGCGAGAG;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	1676559	1676681	.	-	.	ID=id2850;Note=100 38dentity to 123 bp repeat: repeat:CCGACAACACCCCTGCAATTTGAAAGAAAATGAGTCTCTCCTATAGATTT CGGATTGCAGGTAGGCGGCAAAAGAGTGCATCCCGATGAGCTTACACTGGTAAGTGA TTCGGGTAAGCGAGAG;gbkey=repeat_region
AM286415.1	EMBL	gene	1676695	1677270	.	-	.	ID=gene1492;Name=YE1502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1502
AM286415.1	EMBL	CDS	1676695	1677270	.	-	0	ID=cds1434;Parent=gene1492;Dbxref=EnsemblGenomes-Gn:YE1502,EnsemblGenomes-Tr:CAL11582,UniProtKB/TrEMBL:A1JM90,NCBI_GP:CAL11582.1;Name=CAL11582.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL11582.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1677214	1677246	.	-	.	ID=id2851;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1677339	1678349	.	-	.	ID=gene1493;Name=YE1503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1503
AM286415.1	EMBL	CDS	1677339	1678349	.	-	0	ID=cds1435;Parent=gene1493;Dbxref=EnsemblGenomes-Gn:YE1503,EnsemblGenomes-Tr:CAL11583,GOA:A1JM92,InterPro:IPR001509,InterPro:IPR016040,UniProtKB/TrEMBL:A1JM92,NCBI_GP:CAL11583.1;Name=CAL11583.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11583.1;transl_table=11
AM286415.1	EMBL	gene	1678678	1680135	.	-	.	ID=gene1494;Name=YE1504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1504
AM286415.1	EMBL	CDS	1678678	1680135	.	-	0	ID=cds1436;Parent=gene1494;Dbxref=EnsemblGenomes-Gn:YE1504,EnsemblGenomes-Tr:CAL11584,InterPro:IPR016040,UniProtKB/TrEMBL:A1JM93,NCBI_GP:CAL11584.1;Name=CAL11584.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11584.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1678756	1678824	.	-	.	ID=id2852;Note=1 probable transmembrane helix predicted for YE1504 by TMHMM2.0 at aa 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1680132	1681151	.	-	.	ID=gene1495;Name=ltaA;gbkey=Gene;gene=ltaA;gene_biotype=protein_coding;locus_tag=YE1505
AM286415.1	EMBL	CDS	1680132	1681151	.	-	0	ID=cds1437;Parent=gene1495;Dbxref=EnsemblGenomes-Gn:YE1505,EnsemblGenomes-Tr:CAL11585,GOA:A1JM95,InterPro:IPR001597,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR023603,UniProtKB/TrEMBL:A1JM95,NCBI_GP:CAL11585.1;Name=CAL11585.1;gbkey=CDS;gene=ltaA;product=L-allo-threonine aldolase;protein_id=CAL11585.1;transl_table=11
AM286415.1	EMBL	gene	1681290	1682177	.	-	.	ID=gene1496;Name=YE1506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1506
AM286415.1	EMBL	CDS	1681290	1682177	.	-	0	ID=cds1438;Parent=gene1496;Dbxref=EnsemblGenomes-Gn:YE1506,EnsemblGenomes-Tr:CAL11586,GOA:A1JM97,InterPro:IPR007213,InterPro:IPR011610,InterPro:IPR029063,UniProtKB/TrEMBL:A1JM97,NCBI_GP:CAL11586.1;Name=CAL11586.1;Note=Weakly similar to Methanosarcina acetivorans hypothetical protein Ma2745 SWALL:AAM06123 (EMBL:AE010973) (305 aa) fasta scores: E(): 6.4e-19%2C 27.83 38d in 291 aa and to Mycobacterium tuberculosis hypothetical protein Rv2751 or mtv002.16 SWALL:O33293 (EMBL:AL008967) (296 aa) fasta scores: E(): 2.8e-12%2C 26.25 38d in 240 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL008967;product=hypothetical protein;protein_id=CAL11586.1;transl_table=11
AM286415.1	EMBL	gene	1682410	1684131	.	-	.	ID=gene1497;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=YE1507
AM286415.1	EMBL	CDS	1682410	1684131	.	-	0	ID=cds1439;Parent=gene1497;Dbxref=EnsemblGenomes-Gn:YE1507,EnsemblGenomes-Tr:CAL11587,GOA:A1JM98,InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR029035,InterPro:IPR029061,UniProtKB/TrEMBL:A1JM98,NCBI_GP:CAL11587.1;Name=CAL11587.1;gbkey=CDS;gene=poxB;product=pyruvate dehydrogenase [cytochrome];protein_id=CAL11587.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1682554	1683072	.	-	.	ID=id2853;Note=Pfam match to entry PF02775 TPP_enzymes_C%2C Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain %2Cscore 267.8%2C E-value 9.2e-78;gbkey=misc_feature;gene=poxB;inference=protein motif:PFAM:PF02775
AM286415.1	EMBL	sequence_feature	1682824	1682883	.	-	.	ID=id2854;Note=PS00187 Thiamine pyrophosphate enzymes signature.;gbkey=misc_feature;gene=poxB;inference=protein motif:Prosite:PS00187
AM286415.1	EMBL	sequence_feature	1683124	1683573	.	-	.	ID=id2855;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzyme%2C central domain%2C score 143.0%2CE-value 3.3e-40;gbkey=misc_feature;gene=poxB;inference=protein motif:PFAM:PF00205
AM286415.1	EMBL	sequence_feature	1683616	1684131	.	-	.	ID=id2856;Note=Pfam match to entry PF02776 TPP_enzymes_N%2C Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain %2Cscore 271.6%2C E-value 6.8e-79;gbkey=misc_feature;gene=poxB;inference=protein motif:PFAM:PF02776
AM286415.1	EMBL	gene	1684399	1685421	.	-	.	ID=gene1498;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=YE1509
AM286415.1	EMBL	CDS	1684399	1685421	.	-	0	ID=cds1440;Parent=gene1498;Dbxref=EnsemblGenomes-Gn:YE1509,EnsemblGenomes-Tr:CAL11588,GOA:A1JMA1,InterPro:IPR001041,InterPro:IPR001221,InterPro:IPR001433,InterPro:IPR006058,InterPro:IPR008333,InterPro:IPR012675,InterPro:IPR017927,InterPro:IPR017938,UniProtKB/TrEMBL:A1JMA1,NCBI_GP:CAL11588.1;Name=CAL11588.1;gbkey=CDS;gene=hcr;product=putative oxidoreductase;protein_id=CAL11588.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1684417	1684647	.	-	.	ID=id2857;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domain%2C score 66.4%2C E-value 4e-17;gbkey=misc_feature;gene=hcr;inference=protein motif:PFAM:PF00111
AM286415.1	EMBL	sequence_feature	1684429	1684461	.	-	.	ID=id2858;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hcr;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1684525	1684551	.	-	.	ID=id2859;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=hcr;inference=protein motif:Prosite:PS00197
AM286415.1	EMBL	sequence_feature	1684738	1685073	.	-	.	ID=id2860;Note=Pfam match to entry PF00175 NAD_binding_1%2COxidoreductase NAD-binding domain%2C score 24.7%2C E-value 5.3e-07;gbkey=misc_feature;gene=hcr;inference=protein motif:PFAM:PF00175
AM286415.1	EMBL	sequence_feature	1685089	1685373	.	-	.	ID=id2861;Note=Pfam match to entry PF00970 FAD_binding_6%2COxidoreductase FAD-binding domain%2C score 40.6%2C E-value 2.3e-09;gbkey=misc_feature;gene=hcr;inference=protein motif:PFAM:PF00970
AM286415.1	EMBL	gene	1685515	1687167	.	-	.	ID=gene1499;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=YE1510
AM286415.1	EMBL	CDS	1685515	1687167	.	-	0	ID=cds1441;Parent=gene1499;Dbxref=EnsemblGenomes-Gn:YE1510,EnsemblGenomes-Tr:CAL11589,GOA:A1JMA4,InterPro:IPR004137,InterPro:IPR010048,InterPro:IPR011254,InterPro:IPR016099,InterPro:IPR016100,NCBI_GP:CAL11589.1;Name=CAL11589.1;gbkey=CDS;gene=hcp;product=putative prismane protein homologue;protein_id=CAL11589.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1685524	1687167	.	-	.	ID=id2862;Note=Pfam match to entry PF03063 Prismane%2C Prismane/CO dehydrogenase family%2C score 913.0%2C E-value 5.5e-272;gbkey=misc_feature;gene=hcp;inference=protein motif:PFAM:PF03063
AM286415.1	EMBL	sequence_feature	1687084	1687107	.	-	.	ID=id2863;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=hcp;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1687364	1688263	.	-	.	ID=gene1500;Name=YE1511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1511
AM286415.1	EMBL	CDS	1687364	1688263	.	-	0	ID=cds1442;Parent=gene1500;Dbxref=EnsemblGenomes-Gn:YE1511,EnsemblGenomes-Tr:CAL11590,InterPro:IPR005642,UniProtKB/TrEMBL:A1JMA7,NCBI_GP:CAL11590.1;Name=CAL11590.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11590.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1687367	1687939	.	-	.	ID=id2864;Note=Pfam match to entry PF03956 DUF340%2C Membrane protein of unknown function (DUF340)%2C score 282.9%2CE-value 2.6e-82;gbkey=misc_feature;inference=protein motif:PFAM:PF03956
AM286415.1	EMBL	sequence_feature	1688201	1688254	.	-	.	ID=id2865;Note=8 probable transmembrane helices predicted for YE1511 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 102-124%2C139-156%2C 169-191%2C 206-228 and 276-298;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	1688114	1688182	.	-	.	ID=id2865;Note=8 probable transmembrane helices predicted for YE1511 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 102-124%2C139-156%2C 169-191%2C 206-228 and 276-298;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	1688018	1688086	.	-	.	ID=id2865;Note=8 probable transmembrane helices predicted for YE1511 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 102-124%2C139-156%2C 169-191%2C 206-228 and 276-298;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	1687892	1687960	.	-	.	ID=id2865;Note=8 probable transmembrane helices predicted for YE1511 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 102-124%2C139-156%2C 169-191%2C 206-228 and 276-298;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	1687796	1687849	.	-	.	ID=id2865;Note=8 probable transmembrane helices predicted for YE1511 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 102-124%2C139-156%2C 169-191%2C 206-228 and 276-298;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	1687691	1687759	.	-	.	ID=id2865;Note=8 probable transmembrane helices predicted for YE1511 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 102-124%2C139-156%2C 169-191%2C 206-228 and 276-298;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	1687580	1687648	.	-	.	ID=id2865;Note=8 probable transmembrane helices predicted for YE1511 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 102-124%2C139-156%2C 169-191%2C 206-228 and 276-298;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	1687370	1687438	.	-	.	ID=id2865;Note=8 probable transmembrane helices predicted for YE1511 by TMHMM2.0 at aa 4-21%2C 28-50%2C 60-82%2C 102-124%2C139-156%2C 169-191%2C 206-228 and 276-298;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	1688517	1690181	.	+	.	ID=gene1501;Name=YE1512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1512
AM286415.1	EMBL	CDS	1688517	1690181	.	+	0	ID=cds1443;Parent=gene1501;Dbxref=EnsemblGenomes-Gn:YE1512,EnsemblGenomes-Tr:CAL11591,InterPro:IPR022602,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMB0,NCBI_GP:CAL11591.1;Name=CAL11591.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11591.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1688601	1688624	.	+	.	ID=id2866;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1690178	1691161	.	-	.	ID=gene1502;Name=YE1513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1513
AM286415.1	EMBL	CDS	1690178	1691161	.	-	0	ID=cds1444;Parent=gene1502;Dbxref=EnsemblGenomes-Gn:YE1513,EnsemblGenomes-Tr:CAL11592,InterPro:IPR007488,UniProtKB/TrEMBL:A1JMB2,NCBI_GP:CAL11592.1;Name=CAL11592.1;gbkey=CDS;product=putative virulence factor;protein_id=CAL11592.1;transl_table=11
AM286415.1	EMBL	gene	1691350	1692465	.	+	.	ID=gene1503;Name=YE1514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1514
AM286415.1	EMBL	CDS	1691350	1692465	.	+	0	ID=cds1445;Parent=gene1503;Dbxref=EnsemblGenomes-Gn:YE1514,EnsemblGenomes-Tr:CAL11593,GOA:A1JMB4,InterPro:IPR006143,UniProtKB/TrEMBL:A1JMB4,NCBI_GP:CAL11593.1;Name=CAL11593.1;gbkey=CDS;product=putative HlyD family secretion protein;protein_id=CAL11593.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1691383	1691442	.	+	.	ID=id2867;Note=1 probable transmembrane helix predicted for YE1514 by TMHMM2.0 at aa 12-31;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1691530	1692438	.	+	.	ID=id2868;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 35.0%2C E-value 1.1e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	sequence_feature	1691740	1691805	.	+	.	ID=id2869;Note=Predicted helix-turn-helix motif with score 1063.000%2C SD 2.81 at aa 131-152%2C sequence RRQQDLAKLQAVSRQDLDQAIT;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1691805	1692277	.	+	.	ID=id2870;Note=Predicted helix-turn-helix motif with score 1063.000%2C SD 2.81 at aa 310-152%2C sequence TALAVKKAQVETINAQINKTKASLDTANINLDYTKISAPMDGDVVQITTLQGQTVIA AQQAPNILTLADMSTMLVNAQVSEADVIHLKPGMKASFTVLGDPGKRFDGALKDIQP TPEKVNDAIFYSARFEVPNPDRLLRLQMTAQVSIQLANIPQAMVI;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1692277	1692342	.	+	.	ID=id2871;Note=Predicted helix-turn-helix motif with score 1103.000%2C SD 2.94 at aa 310-331%2C sequence IPLSALGDELGTNRYQVAVLKD;gbkey=misc_feature
AM286415.1	EMBL	gene	1692465	1694414	.	+	.	ID=gene1504;Name=YE1515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1515
AM286415.1	EMBL	CDS	1692465	1694414	.	+	0	ID=cds1446;Parent=gene1504;Dbxref=EnsemblGenomes-Gn:YE1515,EnsemblGenomes-Tr:CAL11594,GOA:A1JMB9,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR003838,InterPro:IPR017871,InterPro:IPR017911,InterPro:IPR025857,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMB9,NCBI_GP:CAL11594.1;Name=CAL11594.1;gbkey=CDS;product=putative ABC transporter ATP-binding protein;protein_id=CAL11594.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1692564	1693121	.	+	.	ID=id2872;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 209.1%2C E-value 4.4e-60;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1692585	1692608	.	+	.	ID=id2873;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1692897	1692941	.	+	.	ID=id2874;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1693284	1693352	.	+	.	ID=id2875;Note=4 probable transmembrane helices predicted for YE1515 by TMHMM2.0 at aa 274-296%2C 528-550%2C 577-599 and 609-631;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1694046	1694114	.	+	.	ID=id2875;Note=4 probable transmembrane helices predicted for YE1515 by TMHMM2.0 at aa 274-296%2C 528-550%2C 577-599 and 609-631;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1694193	1694261	.	+	.	ID=id2875;Note=4 probable transmembrane helices predicted for YE1515 by TMHMM2.0 at aa 274-296%2C 528-550%2C 577-599 and 609-631;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1694289	1694357	.	+	.	ID=id2875;Note=4 probable transmembrane helices predicted for YE1515 by TMHMM2.0 at aa 274-296%2C 528-550%2C 577-599 and 609-631;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	1694016	1694390	.	+	.	ID=id2876;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score 152.1%2C E-value 6.1e-43;gbkey=misc_feature;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	gene	1694613	1694870	.	-	.	ID=gene1505;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;gene_synonym=cspH;locus_tag=YE1516
AM286415.1	EMBL	CDS	1694613	1694870	.	-	0	ID=cds1447;Parent=gene1505;Dbxref=EnsemblGenomes-Gn:YE1516,EnsemblGenomes-Tr:CAL11595,GOA:A1JMC2,InterPro:IPR002059,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,InterPro:IPR012751,InterPro:IPR019844,UniProtKB/TrEMBL:A1JMC2,NCBI_GP:CAL11595.1;Name=CAL11595.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 cold shock-like protein CspD cspD or cspH or b0880 or z1117 or ecs0966 SWALL:CSPD_ECOLI (SWALL:P24245) (74 aa) fasta scores: E(): 3.1e-25%2C 84.93 38d in 73 aa%2C and to Yersinia pestis cold shock-like protein cspD or ypo1366 SWALL:Q8ZGD6 (EMBL:AJ414148) (87 aa) fasta scores: E(): 7.9e-28%2C 83.9 38d in 87 aa%2C and to Salmonella typhimurium%2Cand Salmonella typhi similar to cspA but not cold shock induced cspD or stm0943 or sty0940 SWALL:Q8XFS1 (EMBL:AE008740) (73 aa) fasta scores: E(): 9.5e-26%2C 88.88 id in 72 aa;gbkey=CDS;gene=cspD;inference=similar to sequence:UniProtKB:P24245;product=cold shock-like protein;protein_id=CAL11595.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1694670	1694870	.	-	.	ID=id2877;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 140.7%2C E-value 1.7e-39;gbkey=misc_feature;gene=cspD;inference=protein motif:PFAM:PF00313
AM286415.1	EMBL	sequence_feature	1694769	1694828	.	-	.	ID=id2878;Note=PS00352 'Cold-shock' DNA-binding domain signature.;gbkey=misc_feature;gene=cspD;inference=protein motif:Prosite:PS00352
AM286415.1	EMBL	gene	1695230	1695550	.	+	.	ID=gene1506;Name=YE1517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1517
AM286415.1	EMBL	CDS	1695230	1695550	.	+	0	ID=cds1448;Parent=gene1506;Dbxref=EnsemblGenomes-Gn:YE1517,EnsemblGenomes-Tr:CAL11596,GOA:A1JMC5,InterPro:IPR003769,InterPro:IPR014719,InterPro:IPR022935,NCBI_GP:CAL11596.1;Name=CAL11596.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11596.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1695275	1695529	.	+	.	ID=id2879;Note=Pfam match to entry PF02617 DUF174%2C Uncharacterized ACR%2C COG2127%2C score 162.3%2C E-value 5.4e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF02617
AM286415.1	EMBL	gene	1695576	1697852	.	+	.	ID=gene1507;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;gene_synonym=lopD;locus_tag=YE1518
AM286415.1	EMBL	CDS	1695576	1697852	.	+	0	ID=cds1449;Parent=gene1507;Dbxref=EnsemblGenomes-Gn:YE1518,EnsemblGenomes-Tr:CAL11597,GOA:A1JMC6,InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004176,InterPro:IPR013461,InterPro:IPR018368,InterPro:IPR019489,InterPro:IPR023150,InterPro:IPR027417,InterPro:IPR028299,UniProtKB/TrEMBL:A1JMC6,NCBI_GP:CAL11597.1;Name=CAL11597.1;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=CAL11597.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1695612	1695764	.	+	.	ID=id2880;Note=Pfam match to entry PF02861 Clp_N%2C Clp amino terminal domain%2C score 63.5%2C E-value 2.9e-16;gbkey=misc_feature;gene=clpA;inference=protein motif:PFAM:PF02861
AM286415.1	EMBL	sequence_feature	1696197	1696781	.	+	.	ID=id2881;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 67.3%2C E-value 2.1e-17;gbkey=misc_feature;gene=clpA;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	1696212	1696235	.	+	.	ID=id2882;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=clpA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1696476	1696514	.	+	.	ID=id2883;Note=PS00870 Chaperonins clpA/B signature 1.;gbkey=misc_feature;gene=clpA;inference=protein motif:Prosite:PS00870
AM286415.1	EMBL	sequence_feature	1697055	1697078	.	+	.	ID=id2884;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=clpA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1697124	1697180	.	+	.	ID=id2885;Note=PS00871 Chaperonins clpA/B signature 2.;gbkey=misc_feature;gene=clpA;inference=protein motif:Prosite:PS00871
AM286415.1	EMBL	gene	1698097	1698315	.	-	.	ID=gene1508;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=YE1519
AM286415.1	EMBL	CDS	1698097	1698315	.	-	0	ID=cds1450;Parent=gene1508;Dbxref=EnsemblGenomes-Gn:YE1519,EnsemblGenomes-Tr:CAL11598,GOA:A1JMD0,InterPro:IPR004368,InterPro:IPR006196,InterPro:IPR012340,InterPro:IPR022967,NCBI_GP:CAL11598.1;Name=CAL11598.1;gbkey=CDS;gene=infA;product=translation initiation factor IF-1;protein_id=CAL11598.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1698100	1698312	.	-	.	ID=id2886;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 45.8%2C E-value 6.1e-11;gbkey=misc_feature;gene=infA;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	gene	1698481	1699191	.	-	.	ID=gene1509;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=YE1520
AM286415.1	EMBL	CDS	1698481	1699191	.	-	0	ID=cds1451;Parent=gene1509;Dbxref=EnsemblGenomes-Gn:YE1520,EnsemblGenomes-Tr:CAL11599,GOA:A1JMD2,InterPro:IPR004616,InterPro:IPR016181,NCBI_GP:CAL11599.1;Name=CAL11599.1;gbkey=CDS;gene=aat;product=putative leucyl/phenylalanyl-tRNA-protein transferase;protein_id=CAL11599.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1698580	1699092	.	-	.	ID=id2887;Note=Pfam match to entry PF03588 Leu_Phe_trans%2CLeucyl/phenylalanyl-tRNA protein transferase%2C score 346.3%2C E-value 2.2e-101;gbkey=misc_feature;gene=aat;inference=protein motif:PFAM:PF03588
AM286415.1	EMBL	gene	1699549	1701273	.	-	.	ID=gene1510;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;gene_synonym=mdrA,mdrH,surB;locus_tag=YE1521
AM286415.1	EMBL	CDS	1699549	1701273	.	-	0	ID=cds1452;Parent=gene1510;Dbxref=EnsemblGenomes-Gn:YE1521,EnsemblGenomes-Tr:CAL11600,GOA:A1JMD5,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR014223,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMD5,NCBI_GP:CAL11600.1;Name=CAL11600.1;gbkey=CDS;gene=cydC;product=transport ATP-binding protein;protein_id=CAL11600.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1699627	1700178	.	-	.	ID=id2888;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 180.6%2C E-value 1.7e-51;gbkey=misc_feature;gene=cydC;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1699804	1699848	.	-	.	ID=id2889;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=cydC;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1700134	1700157	.	-	.	ID=id2890;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=cydC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1701169	1701237	.	-	.	ID=id2891;Note=6 probable transmembrane helices predicted for YE1521 by TMHMM2.0 at aa 13-35%2C 40-62%2C 133-155%2C 160-182%2C242-264 and 279-301;gbkey=misc_feature;gene=cydC;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1701088	1701156	.	-	.	ID=id2891;Note=6 probable transmembrane helices predicted for YE1521 by TMHMM2.0 at aa 13-35%2C 40-62%2C 133-155%2C 160-182%2C242-264 and 279-301;gbkey=misc_feature;gene=cydC;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1700809	1700877	.	-	.	ID=id2891;Note=6 probable transmembrane helices predicted for YE1521 by TMHMM2.0 at aa 13-35%2C 40-62%2C 133-155%2C 160-182%2C242-264 and 279-301;gbkey=misc_feature;gene=cydC;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1700728	1700796	.	-	.	ID=id2891;Note=6 probable transmembrane helices predicted for YE1521 by TMHMM2.0 at aa 13-35%2C 40-62%2C 133-155%2C 160-182%2C242-264 and 279-301;gbkey=misc_feature;gene=cydC;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1700482	1700550	.	-	.	ID=id2891;Note=6 probable transmembrane helices predicted for YE1521 by TMHMM2.0 at aa 13-35%2C 40-62%2C 133-155%2C 160-182%2C242-264 and 279-301;gbkey=misc_feature;gene=cydC;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1700371	1700439	.	-	.	ID=id2891;Note=6 probable transmembrane helices predicted for YE1521 by TMHMM2.0 at aa 13-35%2C 40-62%2C 133-155%2C 160-182%2C242-264 and 279-301;gbkey=misc_feature;gene=cydC;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1700395	1701210	.	-	.	ID=id2892;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 10.8%2C E-value 0.00011;gbkey=misc_feature;gene=cydC;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	gene	1701276	1703042	.	-	.	ID=gene1511;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;gene_synonym=htrD;locus_tag=YE1522
AM286415.1	EMBL	CDS	1701276	1703042	.	-	0	ID=cds1453;Parent=gene1511;Dbxref=EnsemblGenomes-Gn:YE1522,EnsemblGenomes-Tr:CAL11601,GOA:A1JME0,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR014216,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JME0,NCBI_GP:CAL11601.1;Name=CAL11601.1;gbkey=CDS;gene=cydD;product=transport ATP-binding protein;protein_id=CAL11601.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1701279	1701290	.	-	.	ID=id2893;Note=PS00014 Endoplasmic reticulum targeting sequence.;gbkey=misc_feature;gene=cydD;inference=protein motif:Prosite:PS00014
AM286415.1	EMBL	sequence_feature	1701366	1701917	.	-	.	ID=id2894;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 205.2%2C E-value 6.5e-59;gbkey=misc_feature;gene=cydD;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1701543	1701587	.	-	.	ID=id2895;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=cydD;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1701873	1701896	.	-	.	ID=id2896;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=cydD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1702146	1702973	.	-	.	ID=id2897;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 130.5%2C E-value 2e-36;gbkey=misc_feature;gene=cydD;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	1702908	1702976	.	-	.	ID=id2898;Note=6 probable transmembrane helices predicted for YE1522 by TMHMM2.0 at aa 23-45%2C 60-82%2C 144-161%2C 165-187%2C246-268 and 278-297;gbkey=misc_feature;gene=cydD;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1702797	1702865	.	-	.	ID=id2898;Note=6 probable transmembrane helices predicted for YE1522 by TMHMM2.0 at aa 23-45%2C 60-82%2C 144-161%2C 165-187%2C246-268 and 278-297;gbkey=misc_feature;gene=cydD;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1702560	1702613	.	-	.	ID=id2898;Note=6 probable transmembrane helices predicted for YE1522 by TMHMM2.0 at aa 23-45%2C 60-82%2C 144-161%2C 165-187%2C246-268 and 278-297;gbkey=misc_feature;gene=cydD;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1702482	1702550	.	-	.	ID=id2898;Note=6 probable transmembrane helices predicted for YE1522 by TMHMM2.0 at aa 23-45%2C 60-82%2C 144-161%2C 165-187%2C246-268 and 278-297;gbkey=misc_feature;gene=cydD;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1702239	1702307	.	-	.	ID=id2898;Note=6 probable transmembrane helices predicted for YE1522 by TMHMM2.0 at aa 23-45%2C 60-82%2C 144-161%2C 165-187%2C246-268 and 278-297;gbkey=misc_feature;gene=cydD;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1702152	1702211	.	-	.	ID=id2898;Note=6 probable transmembrane helices predicted for YE1522 by TMHMM2.0 at aa 23-45%2C 60-82%2C 144-161%2C 165-187%2C246-268 and 278-297;gbkey=misc_feature;gene=cydD;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	1703317	1704291	.	-	.	ID=gene1512;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=YE1523
AM286415.1	EMBL	CDS	1703317	1704291	.	-	0	ID=cds1454;Parent=gene1512;Dbxref=EnsemblGenomes-Gn:YE1523,EnsemblGenomes-Tr:CAL11602,GOA:A1JME7,InterPro:IPR000103,InterPro:IPR001327,InterPro:IPR005982,InterPro:IPR008255,InterPro:IPR013027,InterPro:IPR023753,UniProtKB/TrEMBL:A1JME7,NCBI_GP:CAL11602.1;Name=CAL11602.1;gbkey=CDS;gene=trxB;product=thioredoxin reductase;protein_id=CAL11602.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1703389	1704270	.	-	.	ID=id2899;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 261.6%2CE-value 6.8e-76;gbkey=misc_feature;gene=trxB;inference=protein motif:PFAM:PF00070
AM286415.1	EMBL	sequence_feature	1703824	1703886	.	-	.	ID=id2900;Note=PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site.;gbkey=misc_feature;gene=trxB;inference=protein motif:Prosite:PS00573
AM286415.1	EMBL	gene	1705062	1705556	.	+	.	ID=gene1513;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;gene_synonym=alsB,ihb,livR,oppI;locus_tag=YE1524
AM286415.1	EMBL	CDS	1705062	1705556	.	+	0	ID=cds1455;Parent=gene1513;Dbxref=EnsemblGenomes-Gn:YE1524,EnsemblGenomes-Tr:CAL11603,GOA:A1JME9,InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,InterPro:IPR019885,InterPro:IPR019887,InterPro:IPR019888,UniProtKB/TrEMBL:A1JME9,NCBI_GP:CAL11603.1;Name=CAL11603.1;gbkey=CDS;gene=lrp;product=leucine-responsive regulatory protein;protein_id=CAL11603.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1705149	1705229	.	+	.	ID=id2901;Note=PS00519 Bacterial regulatory proteins%2C asnC family signature.;gbkey=misc_feature;gene=lrp;inference=protein motif:Prosite:PS00519
AM286415.1	EMBL	sequence_feature	1705167	1705478	.	+	.	ID=id2902;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 197.3%2C E-value 1.6e-56;gbkey=misc_feature;gene=lrp;inference=protein motif:PFAM:PF01037
AM286415.1	EMBL	gene	1705678	1709298	.	+	.	ID=gene1514;Name=ftsK;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=YE1525
AM286415.1	EMBL	CDS	1705678	1709298	.	+	0	ID=cds1456;Parent=gene1514;Dbxref=EnsemblGenomes-Gn:YE1525,EnsemblGenomes-Tr:CAL11604,GOA:A1JMF1,InterPro:IPR002543,InterPro:IPR018541,InterPro:IPR025199,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMF1,NCBI_GP:CAL11604.1;Name=CAL11604.1;gbkey=CDS;gene=ftsK;product=putative cell division protein;protein_id=CAL11604.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1705741	1705809	.	+	.	ID=id2903;Note=5 probable transmembrane helices predicted for YE1525 by TMHMM2.0 at aa 22-44%2C 76-98%2C 111-133%2C 153-175 and 180-202;gbkey=misc_feature;gene=ftsK;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	1705903	1705971	.	+	.	ID=id2903;Note=5 probable transmembrane helices predicted for YE1525 by TMHMM2.0 at aa 22-44%2C 76-98%2C 111-133%2C 153-175 and 180-202;gbkey=misc_feature;gene=ftsK;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	1706008	1706076	.	+	.	ID=id2903;Note=5 probable transmembrane helices predicted for YE1525 by TMHMM2.0 at aa 22-44%2C 76-98%2C 111-133%2C 153-175 and 180-202;gbkey=misc_feature;gene=ftsK;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	1706134	1706202	.	+	.	ID=id2903;Note=5 probable transmembrane helices predicted for YE1525 by TMHMM2.0 at aa 22-44%2C 76-98%2C 111-133%2C 153-175 and 180-202;gbkey=misc_feature;gene=ftsK;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	1706215	1706283	.	+	.	ID=id2903;Note=5 probable transmembrane helices predicted for YE1525 by TMHMM2.0 at aa 22-44%2C 76-98%2C 111-133%2C 153-175 and 180-202;gbkey=misc_feature;gene=ftsK;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	1706026	1706058	.	+	.	ID=id2904;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ftsK;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1708144	1708788	.	+	.	ID=id2905;Note=Pfam match to entry PF01580 FtsK_SpoIIIE%2CFtsK/SpoIIIE family%2C score 341.8%2C E-value 5e-100;gbkey=misc_feature;gene=ftsK;inference=protein motif:PFAM:PF01580
AM286415.1	EMBL	sequence_feature	1708276	1708299	.	+	.	ID=id2906;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ftsK;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1709690	1710301	.	+	.	ID=gene1515;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;gene_synonym=lplA;locus_tag=YE1526
AM286415.1	EMBL	CDS	1709690	1710301	.	+	0	ID=cds1457;Parent=gene1515;Dbxref=EnsemblGenomes-Gn:YE1526,EnsemblGenomes-Tr:CAL11605,GOA:A1JMF6,InterPro:IPR004564,InterPro:IPR018323,InterPro:IPR029046,NCBI_GP:CAL11605.1;Name=CAL11605.1;gbkey=CDS;gene=lolA;product=putative outer-membrane lipoproteins carrier protein;protein_id=CAL11605.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1709711	1710292	.	+	.	ID=id2907;Note=Pfam match to entry PF03548 LolA%2C Outer membrane lipoprotein carrier protein LolA%2C score 332.1%2C E-value 4.2e-97;gbkey=misc_feature;gene=lolA;inference=protein motif:PFAM:PF03548
AM286415.1	EMBL	gene	1710309	1711652	.	+	.	ID=gene1516;Name=YE1527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1527
AM286415.1	EMBL	CDS	1710309	1711652	.	+	0	ID=cds1458;Parent=gene1516;Dbxref=EnsemblGenomes-Gn:YE1527,EnsemblGenomes-Tr:CAL11606,GOA:A1JMF8,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR008921,InterPro:IPR021886,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMF8,NCBI_GP:CAL11606.1;Name=CAL11606.1;gbkey=CDS;product=putative ATPase protein;protein_id=CAL11606.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1710462	1710971	.	+	.	ID=id2908;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 45.8%2C E-value 6.3e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	1710477	1710500	.	+	.	ID=id2909;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1711824	1713116	.	+	.	ID=gene1517;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=YE1528
AM286415.1	EMBL	CDS	1711824	1713116	.	+	0	ID=cds1459;Parent=gene1517;Dbxref=EnsemblGenomes-Gn:YE1528,EnsemblGenomes-Tr:CAL11607,GOA:A1JMG0,InterPro:IPR002314,InterPro:IPR002317,InterPro:IPR006195,InterPro:IPR010978,InterPro:IPR015866,NCBI_GP:CAL11607.1;Name=CAL11607.1;gbkey=CDS;gene=serS;product=seryl-tRNA synthetase;protein_id=CAL11607.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1711824	1711964	.	+	.	ID=id2910;Note=Pfam match to entry PF02403 Seryl_tRNA_N%2CSeryl-tRNA synthetase N-terminal domain%2C score 60.4%2CE-value 2.5e-15;gbkey=misc_feature;gene=serS;inference=protein motif:PFAM:PF02403
AM286415.1	EMBL	sequence_feature	1712304	1712792	.	+	.	ID=id2911;Note=Pfam match to entry PF00587 tRNA-synt_2b%2C tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)%2C score 202.1%2C E-value 5.4e-58;gbkey=misc_feature;gene=serS;inference=protein motif:PFAM:PF00587
AM286415.1	EMBL	sequence_feature	1712622	1712696	.	+	.	ID=id2912;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;gbkey=misc_feature;gene=serS;inference=protein motif:Prosite:PS00179
AM286415.1	EMBL	repeat_region	1713264	1714646	.	-	.	ID=id2913;Note=Insertion sequence element IS1667;gbkey=repeat_region
AM286415.1	EMBL	gene	1713540	1714559	.	-	.	ID=gene1518;Name=YE1529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1529
AM286415.1	EMBL	CDS	1713540	1714559	.	-	0	ID=cds1460;Parent=gene1518;Dbxref=EnsemblGenomes-Gn:YE1529,EnsemblGenomes-Tr:CAL11608,GOA:A1JMG2,InterPro:IPR002525,InterPro:IPR003346,UniProtKB/TrEMBL:A1JMG2,NCBI_GP:CAL11608.1;Name=CAL11608.1;Note=Similar to Pseudomonas putida transposase Tnpa1 protein SWALL:Q9K2X6 (EMBL:AJ288911) (344 aa) fasta scores: E(): 1.8e-56%2C 45.64 38d in 344 aa and to Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 3.7e-50%2C 42.16 38d in 332 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=putative transposase for IS1667;protein_id=CAL11608.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1713672	1714001	.	-	.	ID=id2914;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 98.4%2C E-value 9.5e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	sequence_feature	1714092	1714370	.	-	.	ID=id2915;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 30.3%2C E-value 2.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	gene	1714890	1716038	.	+	.	ID=gene1519;Name=YE1530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1530
AM286415.1	EMBL	CDS	1714890	1716038	.	+	0	ID=cds1461;Parent=gene1519;Dbxref=EnsemblGenomes-Gn:YE1530,EnsemblGenomes-Tr:CAL11609,GOA:A1JMG4,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,InterPro:IPR023745,NCBI_GP:CAL11609.1;Name=CAL11609.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11609.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1714908	1714976	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1715004	1715072	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1715106	1715165	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1715178	1715246	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1715280	1715348	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1715361	1715429	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1715502	1715570	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1715598	1715657	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1715682	1715741	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1715751	1715819	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1715844	1715912	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1715940	1715996	.	+	.	ID=id2916;Note=12 probable transmembrane helices predicted for YE1530 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 205-227%2C 237-256%2C 265-284%2C 288-310%2C319-341 and 351-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	1715748	1715780	.	+	.	ID=id2917;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1716116	1716763	.	-	.	ID=gene1520;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;gene_synonym=act;locus_tag=YE1531
AM286415.1	EMBL	CDS	1716116	1716763	.	-	0	ID=cds1462;Parent=gene1520;Dbxref=EnsemblGenomes-Gn:YE1531,EnsemblGenomes-Tr:CAL11610,GOA:A1JMG7,InterPro:IPR007197,InterPro:IPR012838,UniProtKB/TrEMBL:A1JMG7,NCBI_GP:CAL11610.1;Name=CAL11610.1;gbkey=CDS;gene=pflA;product=pyruvate formate-lyase 1 activating enzyme;protein_id=CAL11610.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1716740	1716757	.	-	.	ID=id2918;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=pflA;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	1716935	1719217	.	-	.	ID=gene1521;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;gene_synonym=pfl;locus_tag=YE1532
AM286415.1	EMBL	CDS	1716935	1719217	.	-	0	ID=cds1463;Parent=gene1521;Dbxref=EnsemblGenomes-Gn:YE1532,EnsemblGenomes-Tr:CAL11611,GOA:A1JMG9,InterPro:IPR001150,InterPro:IPR004184,InterPro:IPR005949,InterPro:IPR019777,UniProtKB/TrEMBL:A1JMG9,NCBI_GP:CAL11611.1;Name=CAL11611.1;gbkey=CDS;gene=pflB;product=formate acetyltransferase 1;protein_id=CAL11611.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1716992	1717330	.	-	.	ID=id2919;Note=Pfam match to entry PF01228 Gly_radical%2C Glycine radical%2C score 239.5%2C E-value 3.1e-69;gbkey=misc_feature;gene=pflB;inference=protein motif:PFAM:PF01228
AM286415.1	EMBL	sequence_feature	1717004	1717030	.	-	.	ID=id2920;Note=PS00850 Glycine radical signature.;gbkey=misc_feature;gene=pflB;inference=protein motif:Prosite:PS00850
AM286415.1	EMBL	sequence_feature	1717376	1719190	.	-	.	ID=id2921;Note=Pfam match to entry PF02901 PFL%2C Pyruvate formate lyase%2C score 1227.5%2C E-value 0;gbkey=misc_feature;gene=pflB;inference=protein motif:PFAM:PF02901
AM286415.1	EMBL	gene	1719270	1720127	.	-	.	ID=gene1522;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=YE1533
AM286415.1	EMBL	CDS	1719270	1720127	.	-	0	ID=cds1464;Parent=gene1522;Dbxref=EnsemblGenomes-Gn:YE1533,EnsemblGenomes-Tr:CAL11612,GOA:A1JMH1,InterPro:IPR000292,InterPro:IPR023271,InterPro:IPR023999,InterPro:IPR024002,UniProtKB/TrEMBL:A1JMH1,NCBI_GP:CAL11612.1;Name=CAL11612.1;gbkey=CDS;gene=focA;product=putative formate transporter 1;protein_id=CAL11612.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1719279	1720106	.	-	.	ID=id2922;Note=Pfam match to entry PF01226 Form_Nir_trans%2CFormate/nitrite transporter%2C score 564.0%2C E-value 6.5e-167;gbkey=misc_feature;gene=focA;inference=protein motif:PFAM:PF01226
AM286415.1	EMBL	sequence_feature	1719957	1720025	.	-	.	ID=id2923;Note=6 probable transmembrane helices predicted for YE1533 by TMHMM2.0 at aa 35-57%2C 72-94%2C 114-136%2C 161-183%2C195-217 and 256-278;gbkey=misc_feature;gene=focA;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1719846	1719914	.	-	.	ID=id2923;Note=6 probable transmembrane helices predicted for YE1533 by TMHMM2.0 at aa 35-57%2C 72-94%2C 114-136%2C 161-183%2C195-217 and 256-278;gbkey=misc_feature;gene=focA;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1719720	1719788	.	-	.	ID=id2923;Note=6 probable transmembrane helices predicted for YE1533 by TMHMM2.0 at aa 35-57%2C 72-94%2C 114-136%2C 161-183%2C195-217 and 256-278;gbkey=misc_feature;gene=focA;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1719579	1719647	.	-	.	ID=id2923;Note=6 probable transmembrane helices predicted for YE1533 by TMHMM2.0 at aa 35-57%2C 72-94%2C 114-136%2C 161-183%2C195-217 and 256-278;gbkey=misc_feature;gene=focA;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1719477	1719545	.	-	.	ID=id2923;Note=6 probable transmembrane helices predicted for YE1533 by TMHMM2.0 at aa 35-57%2C 72-94%2C 114-136%2C 161-183%2C195-217 and 256-278;gbkey=misc_feature;gene=focA;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1719294	1719362	.	-	.	ID=id2923;Note=6 probable transmembrane helices predicted for YE1533 by TMHMM2.0 at aa 35-57%2C 72-94%2C 114-136%2C 161-183%2C195-217 and 256-278;gbkey=misc_feature;gene=focA;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1719594	1719626	.	-	.	ID=id2924;Note=PS01006 Formate and nitrite transporters signature 2.;gbkey=misc_feature;gene=focA;inference=protein motif:Prosite:PS01006
AM286415.1	EMBL	sequence_feature	1719852	1719881	.	-	.	ID=id2925;Note=PS01005 Formate and nitrite transporters signature 1.;gbkey=misc_feature;gene=focA;inference=protein motif:Prosite:PS01005
AM286415.1	EMBL	gene	1720943	1722709	.	-	.	ID=gene1523;Name=YE1534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1534
AM286415.1	EMBL	CDS	1720943	1722709	.	-	0	ID=cds1465;Parent=gene1523;Dbxref=EnsemblGenomes-Gn:YE1534,EnsemblGenomes-Tr:CAL11613,InterPro:IPR003776,UniProtKB/TrEMBL:A1JMH4,NCBI_GP:CAL11613.1;Name=CAL11613.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11613.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1721534	1722709	.	-	.	ID=id2926;Note=Pfam match to entry PF02624 DUF181%2C Uncharacterized ACR%2C COG1944%2C score 784.4%2C E-value 2.9e-233;gbkey=misc_feature;inference=protein motif:PFAM:PF02624
AM286415.1	EMBL	gene	1722858	1723895	.	+	.	ID=gene1524;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=YE1535
AM286415.1	EMBL	CDS	1722858	1723895	.	+	0	ID=cds1466;Parent=gene1524;Dbxref=EnsemblGenomes-Gn:YE1535,EnsemblGenomes-Tr:CAL11614,GOA:A1JMH6,InterPro:IPR004550,InterPro:IPR006034,InterPro:IPR020827,InterPro:IPR027473,InterPro:IPR027474,InterPro:IPR027475,UniProtKB/TrEMBL:A1JMH6,NCBI_GP:CAL11614.1;Name=CAL11614.1;gbkey=CDS;gene=ansB;product=putative L-asparaginase II precursor;protein_id=CAL11614.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1722876	1722944	.	+	.	ID=id2927;Note=1 probable transmembrane helix predicted for YE1535 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=ansB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1722939	1722965	.	+	.	ID=id2928;Note=PS00144 Asparaginase / glutaminase active site signature 1.;gbkey=misc_feature;gene=ansB;inference=protein motif:Prosite:PS00144
AM286415.1	EMBL	sequence_feature	1722957	1723877	.	+	.	ID=id2929;Note=Pfam match to entry PF00710 Asparaginase%2CAsparaginase%2C score 552.7%2C E-value 1.6e-163;gbkey=misc_feature;gene=ansB;inference=protein motif:PFAM:PF00710
AM286415.1	EMBL	sequence_feature	1723167	1723199	.	+	.	ID=id2930;Note=PS00917 Asparaginase / glutaminase active site signature 2.;gbkey=misc_feature;gene=ansB;inference=protein motif:Prosite:PS00917
AM286415.1	EMBL	gene	1724041	1724733	.	+	.	ID=gene1525;Name=YE1536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1536
AM286415.1	EMBL	CDS	1724041	1724733	.	+	0	ID=cds1467;Parent=gene1525;Dbxref=EnsemblGenomes-Gn:YE1536,EnsemblGenomes-Tr:CAL11615,InterPro:IPR007353,InterPro:IPR023090,UniProtKB/TrEMBL:A1JMH7,NCBI_GP:CAL11615.1;Name=CAL11615.1;Note=Similar to many proteins of undefined function including: Escherichia coli hypothetical protein YcaP or b0906 SWALL:YCAP_ECOLI (SWALL:P75839) (230 aa) fasta scores: E(): 2.3e-52%2C 57.89 38d in 228 aa and Salmonella typhimurium putative inner membrane protein YcaP or stm0976 SWALL:Q8ZQC6 (EMBL:AE008742) (230 aa) fasta scores: E(): 3.1e-52%2C 57.01 38d in 228 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75839;product=putative inner membrane protein;protein_id=CAL11615.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1724083	1724151	.	+	.	ID=id2931;Note=3 probable transmembrane helices predicted for YE1536 by TMHMM2.0 at aa 15-37%2C 50-69 and 74-93;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1724188	1724247	.	+	.	ID=id2931;Note=3 probable transmembrane helices predicted for YE1536 by TMHMM2.0 at aa 15-37%2C 50-69 and 74-93;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1724260	1724319	.	+	.	ID=id2931;Note=3 probable transmembrane helices predicted for YE1536 by TMHMM2.0 at aa 15-37%2C 50-69 and 74-93;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	1724940	1726025	.	+	.	ID=gene1526;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=YE1537
AM286415.1	EMBL	CDS	1724940	1726025	.	+	0	ID=cds1468;Parent=gene1526;Dbxref=EnsemblGenomes-Gn:YE1537,EnsemblGenomes-Tr:CAL11616,GOA:P19689,InterPro:IPR000192,InterPro:IPR003248,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR020578,InterPro:IPR022278,NCBI_GP:CAL11616.1;Name=CAL11616.1;gbkey=CDS;gene=serC;product=phosphoserine aminotransferase;protein_id=CAL11616.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1724979	1725986	.	+	.	ID=id2932;Note=Pfam match to entry PF00266 aminotran_5%2CAminotransferase class-V%2C score 360.7%2C E-value 1e-105;gbkey=misc_feature;gene=serC;inference=protein motif:PFAM:PF00266
AM286415.1	EMBL	sequence_feature	1725501	1725560	.	+	.	ID=id2933;Note=PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=serC;inference=protein motif:Prosite:PS00595
AM286415.1	EMBL	gene	1726121	1727407	.	+	.	ID=gene1527;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=YE1538
AM286415.1	EMBL	CDS	1726121	1727407	.	+	0	ID=cds1469;Parent=gene1527;Dbxref=EnsemblGenomes-Gn:YE1538,EnsemblGenomes-Tr:CAL11617,GOA:P19688,InterPro:IPR001986,InterPro:IPR006264,InterPro:IPR013792,InterPro:IPR023193,NCBI_GP:CAL11617.1;Name=CAL11617.1;gbkey=CDS;gene=aroA;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=CAL11617.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1726139	1727383	.	+	.	ID=id2934;Note=Pfam match to entry PF00275 EPSP_syntase%2C EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) %2Cscore 728.3%2C E-value 2.2e-216;gbkey=misc_feature;gene=aroA;inference=protein motif:PFAM:PF00275
AM286415.1	EMBL	sequence_feature	1726391	1726435	.	+	.	ID=id2935;Note=PS00104 EPSP synthase signature 1.;gbkey=misc_feature;gene=aroA;inference=protein motif:Prosite:PS00104
AM286415.1	EMBL	sequence_feature	1727135	1727191	.	+	.	ID=id2936;Note=PS00885 EPSP synthase signature 2.;gbkey=misc_feature;gene=aroA;inference=protein motif:Prosite:PS00885
AM286415.1	EMBL	gene	1727647	1728339	.	+	.	ID=gene1528;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;gene_synonym=mssA;locus_tag=YE1539
AM286415.1	EMBL	CDS	1727647	1728339	.	+	0	ID=cds1470;Parent=gene1528;Dbxref=EnsemblGenomes-Gn:YE1539,EnsemblGenomes-Tr:CAL11618,GOA:A1JMI5,InterPro:IPR003136,InterPro:IPR011994,InterPro:IPR027417,NCBI_GP:CAL11618.1;Name=CAL11618.1;gbkey=CDS;gene=cmk;product=cytidylate kinase;protein_id=CAL11618.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1727827	1728300	.	+	.	ID=id2937;Note=Pfam match to entry PF02224 Cytidylate_kin%2CCytidylate kinase%2C score 296.7%2C E-value 1.9e-86;gbkey=misc_feature;gene=cmk;inference=protein motif:PFAM:PF02224
AM286415.1	EMBL	gene	1728508	1730181	.	+	.	ID=gene1529;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;gene_synonym=ssyF;locus_tag=YE1540
AM286415.1	EMBL	CDS	1728508	1730181	.	+	0	ID=cds1471;Parent=gene1529;Dbxref=EnsemblGenomes-Gn:YE1540,EnsemblGenomes-Tr:CAL11619,GOA:A1JMI7,InterPro:IPR000110,InterPro:IPR003029,InterPro:IPR012340,InterPro:IPR022967,UniProtKB/TrEMBL:A1JMI7,NCBI_GP:CAL11619.1;Name=CAL11619.1;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=CAL11619.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1728556	1728768	.	+	.	ID=id2938;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 49.1%2C E-value 6.5e-12;gbkey=misc_feature;gene=rpsA;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	sequence_feature	1728808	1729020	.	+	.	ID=id2939;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 70.4%2C E-value 2.5e-18;gbkey=misc_feature;gene=rpsA;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	sequence_feature	1729069	1729287	.	+	.	ID=id2940;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 116.4%2C E-value 3.6e-32;gbkey=misc_feature;gene=rpsA;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	sequence_feature	1729324	1729548	.	+	.	ID=id2941;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 106.3%2C E-value 3.8e-29;gbkey=misc_feature;gene=rpsA;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	sequence_feature	1729585	1729809	.	+	.	ID=id2942;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 94.0%2C E-value 2e-25;gbkey=misc_feature;gene=rpsA;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	sequence_feature	1729846	1730067	.	+	.	ID=id2943;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 84.7%2C E-value 1.2e-22;gbkey=misc_feature;gene=rpsA;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	gene	1730245	1730529	.	+	.	ID=gene1530;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;gene_synonym=himD,hip;locus_tag=YE1541
AM286415.1	EMBL	CDS	1730245	1730529	.	+	0	ID=cds1472;Parent=gene1530;Dbxref=EnsemblGenomes-Gn:YE1541,EnsemblGenomes-Tr:CAL11620,GOA:A1JMJ0,InterPro:IPR000119,InterPro:IPR005685,InterPro:IPR010992,InterPro:IPR020816,NCBI_GP:CAL11620.1;Name=CAL11620.1;gbkey=CDS;gene=ihfB;product=integration host factor beta-subunit;protein_id=CAL11620.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1730245	1730517	.	+	.	ID=id2944;Note=Pfam match to entry PF00216 Bac_DNA_binding%2CBacterial DNA-binding protein%2C score 161.0%2C E-value 1.3e-45;gbkey=misc_feature;gene=ihfB;inference=protein motif:PFAM:PF00216
AM286415.1	EMBL	sequence_feature	1730383	1730442	.	+	.	ID=id2945;Note=PS00045 Bacterial histone-like DNA-binding proteins signature.;gbkey=misc_feature;gene=ihfB;inference=protein motif:Prosite:PS00045
AM286415.1	EMBL	gene	1730866	1733151	.	+	.	ID=gene1531;Name=YE1542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1542
AM286415.1	EMBL	CDS	1730866	1733151	.	+	0	ID=cds1473;Parent=gene1531;Dbxref=EnsemblGenomes-Gn:YE1542,EnsemblGenomes-Tr:CAL11621,GOA:A1JMJ1,InterPro:IPR001279,InterPro:IPR004477,InterPro:IPR004797,InterPro:IPR025405,UniProtKB/TrEMBL:A1JMJ1,NCBI_GP:CAL11621.1;Name=CAL11621.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11621.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1730869	1730937	.	+	.	ID=id2946;Note=10 probable transmembrane helices predicted for YE1542 by TMHMM2.0 at aa 2-24%2C 29-51%2C 228-250%2C 260-282%2C295-314%2C 329-351%2C 363-385%2C 400-422%2C 449-471 and 475-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1730950	1731018	.	+	.	ID=id2946;Note=10 probable transmembrane helices predicted for YE1542 by TMHMM2.0 at aa 2-24%2C 29-51%2C 228-250%2C 260-282%2C295-314%2C 329-351%2C 363-385%2C 400-422%2C 449-471 and 475-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1731547	1731615	.	+	.	ID=id2946;Note=10 probable transmembrane helices predicted for YE1542 by TMHMM2.0 at aa 2-24%2C 29-51%2C 228-250%2C 260-282%2C295-314%2C 329-351%2C 363-385%2C 400-422%2C 449-471 and 475-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1731643	1731711	.	+	.	ID=id2946;Note=10 probable transmembrane helices predicted for YE1542 by TMHMM2.0 at aa 2-24%2C 29-51%2C 228-250%2C 260-282%2C295-314%2C 329-351%2C 363-385%2C 400-422%2C 449-471 and 475-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1731748	1731807	.	+	.	ID=id2946;Note=10 probable transmembrane helices predicted for YE1542 by TMHMM2.0 at aa 2-24%2C 29-51%2C 228-250%2C 260-282%2C295-314%2C 329-351%2C 363-385%2C 400-422%2C 449-471 and 475-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1731850	1731918	.	+	.	ID=id2946;Note=10 probable transmembrane helices predicted for YE1542 by TMHMM2.0 at aa 2-24%2C 29-51%2C 228-250%2C 260-282%2C295-314%2C 329-351%2C 363-385%2C 400-422%2C 449-471 and 475-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1731952	1732020	.	+	.	ID=id2946;Note=10 probable transmembrane helices predicted for YE1542 by TMHMM2.0 at aa 2-24%2C 29-51%2C 228-250%2C 260-282%2C295-314%2C 329-351%2C 363-385%2C 400-422%2C 449-471 and 475-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1732063	1732131	.	+	.	ID=id2946;Note=10 probable transmembrane helices predicted for YE1542 by TMHMM2.0 at aa 2-24%2C 29-51%2C 228-250%2C 260-282%2C295-314%2C 329-351%2C 363-385%2C 400-422%2C 449-471 and 475-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1732210	1732278	.	+	.	ID=id2946;Note=10 probable transmembrane helices predicted for YE1542 by TMHMM2.0 at aa 2-24%2C 29-51%2C 228-250%2C 260-282%2C295-314%2C 329-351%2C 363-385%2C 400-422%2C 449-471 and 475-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1732288	1732347	.	+	.	ID=id2946;Note=10 probable transmembrane helices predicted for YE1542 by TMHMM2.0 at aa 2-24%2C 29-51%2C 228-250%2C 260-282%2C295-314%2C 329-351%2C 363-385%2C 400-422%2C 449-471 and 475-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	1731481	1732290	.	+	.	ID=id2947;Note=Pfam match to entry PF03772 Competence%2C Competence protein%2C score 177.4%2C E-value 1.6e-50;gbkey=misc_feature;inference=protein motif:PFAM:PF03772
AM286415.1	EMBL	sequence_feature	1731748	1731813	.	+	.	ID=id2948;Note=Predicted helix-turn-helix motif with score 1089.000%2C SD 2.90 at aa 295-316%2C sequence LTLWLLLRLFSVSCSAWQIWLW;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1732387	1732953	.	+	.	ID=id2949;Note=Pfam match to entry PF00753 lactamase_B%2CMetallo-beta-lactamase superfamily%2C score 39.7%2C E-value 4.3e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00753
AM286415.1	EMBL	gene	1733187	1734935	.	+	.	ID=gene1532;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=YE1543
AM286415.1	EMBL	CDS	1733187	1734935	.	+	0	ID=cds1474;Parent=gene1532;Dbxref=EnsemblGenomes-Gn:YE1543,EnsemblGenomes-Tr:CAL11622,GOA:A1JMJ7,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR011917,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMJ7,NCBI_GP:CAL11622.1;Name=CAL11622.1;gbkey=CDS;gene=msbA;product=probable transport ATP-binding protein;protein_id=CAL11622.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1733223	1733291	.	+	.	ID=id2950;Note=6 probable transmembrane helices predicted for YE1543 by TMHMM2.0 at aa 13-35%2C 71-93%2C 137-159%2C 164-186%2C244-266 and 276-298;gbkey=misc_feature;gene=msbA;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1733397	1733465	.	+	.	ID=id2950;Note=6 probable transmembrane helices predicted for YE1543 by TMHMM2.0 at aa 13-35%2C 71-93%2C 137-159%2C 164-186%2C244-266 and 276-298;gbkey=misc_feature;gene=msbA;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1733595	1733663	.	+	.	ID=id2950;Note=6 probable transmembrane helices predicted for YE1543 by TMHMM2.0 at aa 13-35%2C 71-93%2C 137-159%2C 164-186%2C244-266 and 276-298;gbkey=misc_feature;gene=msbA;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1733676	1733744	.	+	.	ID=id2950;Note=6 probable transmembrane helices predicted for YE1543 by TMHMM2.0 at aa 13-35%2C 71-93%2C 137-159%2C 164-186%2C244-266 and 276-298;gbkey=misc_feature;gene=msbA;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1733916	1733984	.	+	.	ID=id2950;Note=6 probable transmembrane helices predicted for YE1543 by TMHMM2.0 at aa 13-35%2C 71-93%2C 137-159%2C 164-186%2C244-266 and 276-298;gbkey=misc_feature;gene=msbA;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1734012	1734080	.	+	.	ID=id2950;Note=6 probable transmembrane helices predicted for YE1543 by TMHMM2.0 at aa 13-35%2C 71-93%2C 137-159%2C 164-186%2C244-266 and 276-298;gbkey=misc_feature;gene=msbA;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1733253	1734080	.	+	.	ID=id2951;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 229.1%2C E-value 4.1e-66;gbkey=misc_feature;gene=msbA;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	1734291	1734848	.	+	.	ID=id2952;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 230.2%2C E-value 2e-66;gbkey=misc_feature;gene=msbA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1734312	1734335	.	+	.	ID=id2953;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=msbA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1734627	1734671	.	+	.	ID=id2954;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=msbA;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	1734932	1735918	.	+	.	ID=gene1533;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=YE1544
AM286415.1	EMBL	CDS	1734932	1735918	.	+	0	ID=cds1475;Parent=gene1533;Dbxref=EnsemblGenomes-Gn:YE1544,EnsemblGenomes-Tr:CAL11623,GOA:A1JMK0,InterPro:IPR003758,InterPro:IPR027417,NCBI_GP:CAL11623.1;Name=CAL11623.1;gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=CAL11623.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1734962	1735906	.	+	.	ID=id2955;Note=Pfam match to entry PF02606 LpxK%2CTetraacyldisaccharide-1-P 4'-kinase%2C score 518.8%2C E-value 2.5e-153;gbkey=misc_feature;gene=lpxK;inference=protein motif:PFAM:PF02606
AM286415.1	EMBL	sequence_feature	1734965	1735033	.	+	.	ID=id2956;Note=1 probable transmembrane helix predicted for YE1544 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;gene=lpxK;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1735925	1737274	.	-	.	ID=gene1534;Name=YE1545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1545
AM286415.1	EMBL	CDS	1735925	1737274	.	-	0	ID=cds1476;Parent=gene1534;Dbxref=EnsemblGenomes-Gn:YE1545,EnsemblGenomes-Tr:CAL11624,InterPro:IPR009770,UniProtKB/TrEMBL:A1JMK1,NCBI_GP:CAL11624.1;Name=CAL11624.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11624.1;transl_table=11
AM286415.1	EMBL	gene	1737791	1738000	.	+	.	ID=gene1535;Name=cspE2;gbkey=Gene;gene=cspE2;gene_biotype=protein_coding;locus_tag=YE1546
AM286415.1	EMBL	CDS	1737791	1738000	.	+	0	ID=cds1477;Parent=gene1535;Dbxref=EnsemblGenomes-Gn:YE1546,EnsemblGenomes-Tr:CAL11625,GOA:A1JMK3,InterPro:IPR002059,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,InterPro:IPR019844,UniProtKB/TrEMBL:A1JMK3,NCBI_GP:CAL11625.1;Name=CAL11625.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 cold shock-like protein cspE or msmC or gicA or b0623 or z0769 or ecs0662 SWALL:CSPE_ECOLI (SWALL:P36997) (68 aa) fasta scores: E(): 3.1e-18%2C 72.05 38d in 68 aa and to Vibrio cholerae hypothetical protein SWALL:AAC72388 (EMBL:AF098260) (69 aa) fasta scores: E(): 9.5e-19%2C 72.46 id in 69 aa%2C and to Yersinia pestis putative cold shock protein cspE or ypo2595 SWALL:Q8ZDH3 (EMBL:AJ414153) (69 aa) fasta scores: E(): 9.5e-19%2C 71.01 38d in 69 aa;gbkey=CDS;gene=cspE2;inference=similar to sequence:UniProtKB:P36997;product=putative cold shock protein CspE2;protein_id=CAL11625.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1737797	1737997	.	+	.	ID=id2957;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 142.4%2C E-value 5.1e-40;gbkey=misc_feature;gene=cspE2;inference=protein motif:PFAM:PF00313
AM286415.1	EMBL	sequence_feature	1737839	1737898	.	+	.	ID=id2958;Note=PS00352 'Cold-shock' DNA-binding domain signature.;gbkey=misc_feature;gene=cspE2;inference=protein motif:Prosite:PS00352
AM286415.1	EMBL	gene	1738217	1738426	.	+	.	ID=gene1536;Name=cspE3;gbkey=Gene;gene=cspE3;gene_biotype=protein_coding;gene_synonym=cspB,msmC;locus_tag=YE1547
AM286415.1	EMBL	CDS	1738217	1738426	.	+	0	ID=cds1478;Parent=gene1536;Dbxref=EnsemblGenomes-Gn:YE1547,EnsemblGenomes-Tr:CAL11626,GOA:A1JMK5,InterPro:IPR002059,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,UniProtKB/TrEMBL:A1JMK5,NCBI_GP:CAL11626.1;Name=CAL11626.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 cold shock-like protein CspE cspE or msmC or gicA or b0623 or z0769 or ecs0662 SWALL:CSPE_ECOLI (SWALL:P36997) (68 aa) fasta scores: E(): 1.4e-11%2C 56.25 id in 64 aa%2C and to Yersinia pestis cold shock-like protein cspB or ypo1398 SWALL:Q8ZGA6 (EMBL:AJ414148) (69 aa) fasta scores: E(): 3.8e-26%2C 94.2 38d in 69 aa%2C and to Yersinia pestis putative cold shock protein cspE or ypo2595 SWALL:Q8ZDH3 (EMBL:AJ414153) (69 aa) fasta scores: E(): 4.3e-12%2C 55.88 38d in 68 aa;gbkey=CDS;gene=cspE3;inference=similar to sequence:UniProtKB:P36997;product=cold shock-like protein cspE3;protein_id=CAL11626.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1738223	1738423	.	+	.	ID=id2959;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 69.3%2C E-value 5.4e-18;gbkey=misc_feature;gene=cspE3;inference=protein motif:PFAM:PF00313
AM286415.1	EMBL	gene	1739047	1739229	.	+	.	ID=gene1537;Name=YE1549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1549
AM286415.1	EMBL	CDS	1739047	1739229	.	+	0	ID=cds1479;Parent=gene1537;Dbxref=EnsemblGenomes-Gn:YE1549,EnsemblGenomes-Tr:CAL11627,InterPro:IPR005651,NCBI_GP:CAL11627.1;Name=CAL11627.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11627.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1739047	1739202	.	+	.	ID=id2960;Note=Pfam match to entry PF03966 DUF343%2C Protein of unknown function (DUF343)%2C score 84.0%2C E-value 2e-22;gbkey=misc_feature;inference=protein motif:PFAM:PF03966
AM286415.1	EMBL	gene	1739226	1739978	.	+	.	ID=gene1538;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=YE1550
AM286415.1	EMBL	CDS	1739226	1739978	.	+	0	ID=cds1480;Parent=gene1538;Dbxref=EnsemblGenomes-Gn:YE1550,EnsemblGenomes-Tr:CAL11628,GOA:A1JMK9,InterPro:IPR003329,InterPro:IPR004528,InterPro:IPR029044,NCBI_GP:CAL11628.1;Name=CAL11628.1;gbkey=CDS;gene=kdsB;product=putative 3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=CAL11628.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1739235	1739888	.	+	.	ID=id2961;Note=Pfam match to entry PF02348 CTP_transf_3%2CCytidylyltransferase%2C score 318.3%2C E-value 5.8e-93;gbkey=misc_feature;gene=kdsB;inference=protein motif:PFAM:PF02348
AM286415.1	EMBL	gene	1740168	1741061	.	+	.	ID=gene1539;Name=YE1551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1551
AM286415.1	EMBL	CDS	1740168	1741061	.	+	0	ID=cds1481;Parent=gene1539;Dbxref=EnsemblGenomes-Gn:YE1551,EnsemblGenomes-Tr:CAL11629,GOA:A1JML1,InterPro:IPR011009,InterPro:IPR016477,UniProtKB/TrEMBL:A1JML1,NCBI_GP:CAL11629.1;Name=CAL11629.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11629.1;transl_table=11
AM286415.1	EMBL	gene	1741064	1741831	.	-	.	ID=gene1540;Name=YE1552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1552
AM286415.1	EMBL	CDS	1741064	1741831	.	-	0	ID=cds1482;Parent=gene1540;Dbxref=EnsemblGenomes-Gn:YE1552,EnsemblGenomes-Tr:CAL11630,InterPro:IPR003848,InterPro:IPR014729,UniProtKB/TrEMBL:A1JML3,NCBI_GP:CAL11630.1;Name=CAL11630.1;Note=Similar to many proteins of undefined function including: Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YcbC or b0920 or z1267 or ecs1003 SWALL:YCBC_ECOLI (SWALL:P36565) (259 aa) fasta scores: E(): 3e-58%2C 59.6 38d in 255 aa%2C Salmonella typhi putative membrane protein Sty0992 SWALL:Q8Z7Z8 (EMBL:AL627268) (258 aa) fasta scores: E(): 2.7e-60%2C 62.15 38d in 251 aa and Vibrio cholerae hypothetical protein Vc1718 SWALL:Q9KRC4 (EMBL:AE004250) (282 aa) fasta scores: E(): 1.9e-36%2C43.95 38d in 248 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P36565;product=putative inner membrane protein;protein_id=CAL11630.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1741082	1741813	.	-	.	ID=id2962;Note=Pfam match to entry PF02698 DUF218%2C Uncharacterized ACR%2C COG1434%2C score 293.5%2C E-value 1.8e-85;gbkey=misc_feature;inference=protein motif:PFAM:PF02698
AM286415.1	EMBL	sequence_feature	1741658	1741717	.	-	.	ID=id2963;Note=probable transmembrane helix predicted for YE1552 by TMHMM2.0 at aa 10-32;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1742022	1742807	.	+	.	ID=gene1541;Name=smtA;gbkey=Gene;gene=smtA;gene_biotype=protein_coding;locus_tag=YE1553
AM286415.1	EMBL	CDS	1742022	1742807	.	+	0	ID=cds1483;Parent=gene1541;Dbxref=EnsemblGenomes-Gn:YE1553,EnsemblGenomes-Tr:CAL11631,GOA:A1JML6,InterPro:IPR025714,InterPro:IPR029063,UniProtKB/TrEMBL:A1JML6,NCBI_GP:CAL11631.1;Name=CAL11631.1;gbkey=CDS;gene=smtA;product=putative methyltransferase;protein_id=CAL11631.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1742544	1742609	.	+	.	ID=id2964;Note=Predicted helix-turn-helix motif with score 1181.000%2C SD 3.21 at aa 175-196%2C sequence RRQRSLSPQYPLDPPTVYGWLE;gbkey=misc_feature;gene=smtA
AM286415.1	EMBL	sequence_feature	1742616	1742639	.	+	.	ID=id2965;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=smtA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1742804	1744126	.	+	.	ID=gene1542;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;gene_synonym=kicB;locus_tag=YE1554
AM286415.1	EMBL	CDS	1742804	1744126	.	+	0	ID=cds1484;Parent=gene1542;Dbxref=EnsemblGenomes-Gn:YE1554,EnsemblGenomes-Tr:CAL11632,GOA:A1JML8,InterPro:IPR005582,InterPro:IPR011991,NCBI_GP:CAL11632.1;Name=CAL11632.1;gbkey=CDS;gene=mukF;product=putative killing factor protein;protein_id=CAL11632.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1742804	1744123	.	+	.	ID=id2966;Note=Pfam match to entry PF03882 KicB%2C KicB killing factor%2C score 1174.9%2C E-value 0;gbkey=misc_feature;gene=mukF;inference=protein motif:PFAM:PF03882
AM286415.1	EMBL	gene	1744134	1744835	.	+	.	ID=gene1543;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;gene_synonym=kicA;locus_tag=YE1555
AM286415.1	EMBL	CDS	1744134	1744835	.	+	0	ID=cds1485;Parent=gene1543;Dbxref=EnsemblGenomes-Gn:YE1555,EnsemblGenomes-Tr:CAL11633,GOA:A1JMM0,InterPro:IPR007385,UniProtKB/TrEMBL:A1JMM0,NCBI_GP:CAL11633.1;Name=CAL11633.1;gbkey=CDS;gene=mukE;product=conserved hypothetical protein;protein_id=CAL11633.1;transl_table=11
AM286415.1	EMBL	gene	1744832	1749277	.	+	.	ID=gene1544;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=YE1556
AM286415.1	EMBL	CDS	1744832	1749277	.	+	0	ID=cds1486;Parent=gene1544;Dbxref=EnsemblGenomes-Gn:YE1556,EnsemblGenomes-Tr:CAL11634,GOA:A1JMM2,InterPro:IPR007406,InterPro:IPR012090,InterPro:IPR027417,NCBI_GP:CAL11634.1;Name=CAL11634.1;gbkey=CDS;gene=mukB;product=cell division protein;protein_id=CAL11634.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1744931	1744954	.	+	.	ID=id2967;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=mukB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1749600	1751471	.	+	.	ID=gene1545;Name=YE1557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1557
AM286415.1	EMBL	CDS	1749600	1751471	.	+	0	ID=cds1487;Parent=gene1545;Dbxref=EnsemblGenomes-Gn:YE1557,EnsemblGenomes-Tr:CAL11635,GOA:A1JMM3,InterPro:IPR002477,InterPro:IPR005490,UniProtKB/TrEMBL:A1JMM3,NCBI_GP:CAL11635.1;Name=CAL11635.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11635.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1749633	1749701	.	+	.	ID=id2968;Note=1 probable transmembrane helix predicted for YE1557 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1750560	1750652	.	+	.	ID=id2969;Note=Pfam match to entry PF01471 PG_binding_1%2C Putative peptidoglycan binding domain%2C score 18.0%2C E-value 0.00013;gbkey=misc_feature;inference=protein motif:PFAM:PF01471
AM286415.1	EMBL	sequence_feature	1750875	1750895	.	+	.	ID=id2970;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	1751730	1752278	.	+	.	ID=gene1546;Name=YE1558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1558
AM286415.1	EMBL	CDS	1751730	1752278	.	+	0	ID=cds1488;Parent=gene1546;Dbxref=EnsemblGenomes-Gn:YE1558,EnsemblGenomes-Tr:CAL11636,InterPro:IPR009045,InterPro:IPR010275,UniProtKB/TrEMBL:A1JMM6,NCBI_GP:CAL11636.1;Name=CAL11636.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11636.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1751763	1751831	.	+	.	ID=id2971;Note=1 probable transmembrane helix predicted for YE1558 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1752337	1752984	.	+	.	ID=gene1547;Name=YE1559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1559
AM286415.1	EMBL	CDS	1752337	1752984	.	+	0	ID=cds1489;Parent=gene1547;Dbxref=EnsemblGenomes-Gn:YE1559,EnsemblGenomes-Tr:CAL11637,InterPro:IPR001279,UniProtKB/TrEMBL:A1JMM7,NCBI_GP:CAL11637.1;Name=CAL11637.1;gbkey=CDS;product=metallo-beta-lactamase superfamily protein;protein_id=CAL11637.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1752358	1752912	.	+	.	ID=id2972;Note=Pfam match to entry PF00753 lactamase_B%2CMetallo-beta-lactamase superfamily%2C score 170.0%2C E-value 2.5e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF00753
AM286415.1	EMBL	gene	1753283	1754812	.	+	.	ID=gene1548;Name=YE1560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1560
AM286415.1	EMBL	CDS	1753283	1754812	.	+	0	ID=cds1490;Parent=gene1548;Dbxref=EnsemblGenomes-Gn:YE1560,EnsemblGenomes-Tr:CAL11638,InterPro:IPR001633,InterPro:IPR024744,UniProtKB/TrEMBL:A1JMM9,NCBI_GP:CAL11638.1;Name=CAL11638.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa3825 SWALL:Q9HXH7 (EMBL:AE004800) (526 aa) fasta scores: E(): 1.3e-86%2C 45.82 38d in 515 aa%2C Escherichia coli hypothetical protein YcgG or b1168 SWALL:YCGG_ECOLI (SWALL:P75995) (507 aa) fasta scores: E(): 4.5e-51%2C 32.05 id in 496 aa%2C and Escherichia coli hypothetical protein YoaD or b1815 SWALL:YOAD_ECOLI (SWALL:P76261) (532 aa) fasta scores: E(): 3.8e-41%2C 31.34 38d in 504 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76261;product=putative exported protein;protein_id=CAL11638.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1753973	1754041	.	+	.	ID=id2973;Note=2 probable transmembrane helices predicted for YE1560 by TMHMM2.0 at aa 15-34 and 231-253;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1754048	1754788	.	+	.	ID=id2974;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score 335.5%2C E-value 3.8e-98;gbkey=misc_feature;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	gene	1755072	1756262	.	-	.	ID=gene1549;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=YE1561
AM286415.1	EMBL	CDS	1755072	1756262	.	-	0	ID=cds1491;Parent=gene1549;Dbxref=EnsemblGenomes-Gn:YE1561,EnsemblGenomes-Tr:CAL11639,GOA:A1JMN1,InterPro:IPR000796,InterPro:IPR004838,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015424,UniProtKB/TrEMBL:A1JMN1,NCBI_GP:CAL11639.1;Name=CAL11639.1;gbkey=CDS;gene=aspC;product=aspartate aminotransferase;protein_id=CAL11639.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1755075	1756025	.	-	.	ID=id2975;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 391.1%2C E-value 6.9e-115;gbkey=misc_feature;gene=aspC;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	1755495	1755536	.	-	.	ID=id2976;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=aspC;inference=protein motif:Prosite:PS00105
AM286415.1	EMBL	repeat_region	1756469	1757895	.	-	.	ID=id2977;Note=IS4-like insertion sequence element IS1660;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	1756469	1756484	.	+	.	ID=id2978;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	stem_loop	1756470	1756501	.	-	.	ID=id2979;gbkey=stem_loop
AM286415.1	EMBL	gene	1756478	1757812	.	-	.	ID=gene1550;Name=YE1562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1562
AM286415.1	EMBL	CDS	1756478	1757812	.	-	0	ID=cds1492;Parent=gene1550;Dbxref=EnsemblGenomes-Gn:YE1562,EnsemblGenomes-Tr:CAL11640,GOA:A1JHZ4,InterPro:IPR002559,InterPro:IPR012337,InterPro:IPR024473,UniProtKB/TrEMBL:A1JHZ4,NCBI_GP:CAL11640.1;Name=CAL11640.1;Note=Highly similar to many transposases from the IS element IS4 including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 9.8e-166%2C89.54 38d in 440 aa and to Pantoea agglomerans insertion element protein SWALL:P71168 (EMBL:X81894) (440 aa) fasta scores: E(): 1.7e-86%2C 52.42 38d in 433 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1660;protein_id=CAL11640.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1756757	1757434	.	-	.	ID=id2980;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 160.8%2C E-value 1.5e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	INVERTED	1757880	1757895	.	-	.	ID=id2981;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	1757957	1759190	.	-	.	ID=gene1551;Name=ompF;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=YE1563;partial=true;start_range=.,1757957
AM286415.1	EMBL	mRNA	1757957	1759190	.	-	.	ID=rna73;Parent=gene1551;gbkey=mRNA;gene=ompF;partial=true;start_range=.,1757957
AM286415.1	EMBL	exon	1757957	1759190	.	-	.	ID=id2982;Parent=rna73;gbkey=mRNA;gene=ompF;partial=true;start_range=.,1757957
AM286415.1	EMBL	CDS	1757957	1759096	.	-	0	ID=cds1493;Parent=rna73;Dbxref=EnsemblGenomes-Gn:YE1563,EnsemblGenomes-Tr:CAL11641,GOA:A1JMN7,InterPro:IPR001702,InterPro:IPR001897,InterPro:IPR013793,InterPro:IPR023614,UniProtKB/TrEMBL:A1JMN7,NCBI_GP:CAL11641.1;Name=CAL11641.1;gbkey=CDS;gene=ompF;product=putative outer membrane porin F protein;protein_id=CAL11641.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1757960	1759015	.	-	.	ID=id2983;Note=Pfam match to entry PF00267 Gram-ve_porins%2CGram-negative porin%2C score 665.5%2C E-value 1.7e-197;gbkey=misc_feature;gene=ompF;inference=protein motif:PFAM:PF00267
AM286415.1	EMBL	sequence_feature	1758056	1758106	.	-	.	ID=id2984;Note=PS00576 General diffusion Gram-negative porins signature.;gbkey=misc_feature;gene=ompF;inference=protein motif:Prosite:PS00576
AM286415.1	EMBL	sequence_feature	1759019	1759078	.	-	.	ID=id2985;Note=1 probable transmembrane helix predicted for YE1563 by TMHMM2.0 at aa 7-26;gbkey=misc_feature;gene=ompF;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	five_prime_UTR	1759097	1759190	.	-	.	ID=id2986;gbkey=5'UTR;gene=ompF
AM286415.1	EMBL	gene	1759395	1760795	.	-	.	ID=gene1552;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;gene_synonym=tss;locus_tag=YE1564
AM286415.1	EMBL	CDS	1759395	1760795	.	-	0	ID=cds1494;Parent=gene1552;Dbxref=EnsemblGenomes-Gn:YE1564,EnsemblGenomes-Tr:CAL11642,GOA:A1JMN8,InterPro:IPR002312,InterPro:IPR004364,InterPro:IPR004365,InterPro:IPR004522,InterPro:IPR006195,InterPro:IPR012340,InterPro:IPR018150,NCBI_GP:CAL11642.1;Name=CAL11642.1;gbkey=CDS;gene=asnS;product=asparaginyl-tRNA synthetase;protein_id=CAL11642.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1759410	1760447	.	-	.	ID=id2987;Note=Pfam match to entry PF00152 tRNA-synt_2%2C tRNA synthetases class II (D%2C K and N)%2C score 589.7%2C E-value 1.2e-174;gbkey=misc_feature;gene=asnS;inference=protein motif:PFAM:PF00152
AM286415.1	EMBL	sequence_feature	1759464	1759493	.	-	.	ID=id2988;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=asnS;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	1760043	1760099	.	-	.	ID=id2989;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;gbkey=misc_feature;gene=asnS;inference=protein motif:Prosite:PS00179
AM286415.1	EMBL	sequence_feature	1760496	1760738	.	-	.	ID=id2990;Note=Pfam match to entry PF01336 tRNA_anti%2C OB-fold nucleic acid binding domain%2C score 68.9%2C E-value 7e-18;gbkey=misc_feature;gene=asnS;inference=protein motif:PFAM:PF01336
AM286415.1	EMBL	gene	1761052	1762257	.	-	.	ID=gene1553;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=YE1565
AM286415.1	EMBL	CDS	1761052	1762257	.	-	0	ID=cds1495;Parent=gene1553;Dbxref=EnsemblGenomes-Gn:YE1565,EnsemblGenomes-Tr:CAL11643,GOA:A1JMP2,InterPro:IPR002638,InterPro:IPR006406,InterPro:IPR007229,NCBI_GP:CAL11643.1;Name=CAL11643.1;gbkey=CDS;gene=pncB;product=putative nicotinate phosphoribosyltransferase;protein_id=CAL11643.1;transl_table=11
AM286415.1	EMBL	gene	1762849	1765464	.	+	.	ID=gene1554;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=YE1567
AM286415.1	EMBL	CDS	1762849	1765464	.	+	0	ID=cds1496;Parent=gene1554;Dbxref=EnsemblGenomes-Gn:YE1567,EnsemblGenomes-Tr:CAL11644,GOA:A1JMP4,InterPro:IPR001930,InterPro:IPR012779,InterPro:IPR014782,InterPro:IPR024601,UniProtKB/TrEMBL:A1JMP4,NCBI_GP:CAL11644.1;Name=CAL11644.1;gbkey=CDS;gene=pepN;product=putative aminopeptidase N;protein_id=CAL11644.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1762888	1764000	.	+	.	ID=id2991;Note=Pfam match to entry PF01433 Peptidase_M1%2C Peptidase family M1%2C score 239.0%2C E-value 4.4e-69;gbkey=misc_feature;gene=pepN;inference=protein motif:PFAM:PF01433
AM286415.1	EMBL	sequence_feature	1763728	1763757	.	+	.	ID=id2992;Note=PS00142 Neutral zinc metallopeptidases%2Czinc-binding region signature.;gbkey=misc_feature;gene=pepN;inference=protein motif:Prosite:PS00142
AM286415.1	EMBL	gene	1765632	1766642	.	+	.	ID=gene1555;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=YE1568
AM286415.1	EMBL	CDS	1765632	1766642	.	+	0	ID=cds1497;Parent=gene1555;Dbxref=EnsemblGenomes-Gn:YE1568,EnsemblGenomes-Tr:CAL11645,GOA:A1JMP8,InterPro:IPR001295,InterPro:IPR005719,InterPro:IPR012135,InterPro:IPR013785,NCBI_GP:CAL11645.1;Name=CAL11645.1;gbkey=CDS;gene=pyrD;product=dihydroorotate dehydrogenase;protein_id=CAL11645.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1765767	1766639	.	+	.	ID=id2993;Note=Pfam match to entry PF01180 DHOdehase%2CDihydroorotate dehydrogenase%2C score 538.3%2C E-value 3.4e-159;gbkey=misc_feature;gene=pyrD;inference=protein motif:PFAM:PF01180
AM286415.1	EMBL	sequence_feature	1765869	1765928	.	+	.	ID=id2994;Note=PS00911 Dihydroorotate dehydrogenase signature 1.;gbkey=misc_feature;gene=pyrD;inference=protein motif:Prosite:PS00911
AM286415.1	EMBL	sequence_feature	1766505	1766567	.	+	.	ID=id2995;Note=PS00912 Dihydroorotate dehydrogenase signature 2.;gbkey=misc_feature;gene=pyrD;inference=protein motif:Prosite:PS00912
AM286415.1	EMBL	gene	1766941	1767498	.	+	.	ID=gene1556;Name=YE1569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1569
AM286415.1	EMBL	CDS	1766941	1767498	.	+	0	ID=cds1498;Parent=gene1556;Dbxref=EnsemblGenomes-Gn:YE1569,EnsemblGenomes-Tr:CAL11646,GOA:A1JMQ1,InterPro:IPR009809,UniProtKB/TrEMBL:A1JMQ1,NCBI_GP:CAL11646.1;Name=CAL11646.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11646.1;transl_table=11
AM286415.1	EMBL	gene	1767514	1768626	.	-	.	ID=gene1557;Name=YE1570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1570
AM286415.1	EMBL	CDS	1767514	1768626	.	-	0	ID=cds1499;Parent=gene1557;Dbxref=EnsemblGenomes-Gn:YE1570,EnsemblGenomes-Tr:CAL11647,GOA:A1JMQ2,InterPro:IPR001041,InterPro:IPR005302,InterPro:IPR005303,InterPro:IPR006058,InterPro:IPR011037,InterPro:IPR012675,UniProtKB/TrEMBL:A1JMQ2,NCBI_GP:CAL11647.1;Name=CAL11647.1;gbkey=CDS;product=putative iron-sulfur binding protein;protein_id=CAL11647.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1767538	1767756	.	-	.	ID=id2996;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domain%2C score 56.5%2C E-value 3.7e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00111
AM286415.1	EMBL	sequence_feature	1767634	1767660	.	-	.	ID=id2997;Note=PS00197 2Fe-2S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00197
AM286415.1	EMBL	sequence_feature	1767823	1768245	.	-	.	ID=id2998;Note=Pfam match to entry PF03473 MOSC%2C MOSC domain %2Cscore 161.9%2C E-value 6.9e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF03473
AM286415.1	EMBL	sequence_feature	1768273	1768623	.	-	.	ID=id2999;Note=Pfam match to entry PF03476 MOSC_N%2C MOSC N-terminal beta barrel domain%2C score 149.2%2C E-value 4.8e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF03476
AM286415.1	EMBL	sequence_feature	1768510	1768539	.	-	.	ID=id3000;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	1768726	1770846	.	+	.	ID=gene1558;Name=YE1571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1571
AM286415.1	EMBL	CDS	1768726	1770846	.	+	0	ID=cds1500;Parent=gene1558;Dbxref=EnsemblGenomes-Gn:YE1571,EnsemblGenomes-Tr:CAL11648,GOA:A1JMQ6,InterPro:IPR000241,InterPro:IPR002052,InterPro:IPR004114,InterPro:IPR017244,InterPro:IPR019614,InterPro:IPR029063,NCBI_GP:CAL11648.1;Name=CAL11648.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11648.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1768891	1769187	.	+	.	ID=id3001;Note=Pfam match to entry PF02926 THUMP%2C THUMP domain %2Cscore 57.9%2C E-value 1.5e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF02926
AM286415.1	EMBL	sequence_feature	1769209	1769853	.	+	.	ID=id3002;Note=Pfam match to entry PF01170 UPF0020%2C Putative RNA methylase family UPF0020%2C score 298.0%2C E-value 7.6e-87;gbkey=misc_feature;inference=protein motif:PFAM:PF01170
AM286415.1	EMBL	sequence_feature	1769308	1769343	.	+	.	ID=id3003;Note=PS01261 Uncharacterized protein family UPF0020 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01261
AM286415.1	EMBL	sequence_feature	1769641	1769661	.	+	.	ID=id3004;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	1770852	1772765	.	+	.	ID=gene1559;Name=uup;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=YE1572
AM286415.1	EMBL	CDS	1770852	1772765	.	+	0	ID=cds1501;Parent=gene1559;Dbxref=EnsemblGenomes-Gn:YE1572,EnsemblGenomes-Tr:CAL11649,GOA:A1JMQ8,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMQ8,NCBI_GP:CAL11649.1;Name=CAL11649.1;gbkey=CDS;gene=uup;product=ABC transporter ATP-binding protein;protein_id=CAL11649.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1770936	1771538	.	+	.	ID=id3005;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 160.2%2C E-value 2.3e-45;gbkey=misc_feature;gene=uup;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1770957	1770980	.	+	.	ID=id3006;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=uup;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1771320	1771364	.	+	.	ID=id3007;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=uup;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1771884	1772390	.	+	.	ID=id3008;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 130.4%2C E-value 2.1e-36;gbkey=misc_feature;gene=uup;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1771905	1771928	.	+	.	ID=id3009;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=uup;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1772172	1772216	.	+	.	ID=id3010;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=uup;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	1772984	1774201	.	+	.	ID=gene1560;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=YE1573
AM286415.1	EMBL	CDS	1772984	1774201	.	+	0	ID=cds1502;Parent=gene1560;Dbxref=EnsemblGenomes-Gn:YE1573,EnsemblGenomes-Tr:CAL11650,InterPro:IPR005219,InterPro:IPR007498,UniProtKB/TrEMBL:A1JMR1,NCBI_GP:CAL11650.1;Name=CAL11650.1;gbkey=CDS;gene=pqiA;product=putative paraquat-inducible protein A;protein_id=CAL11650.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1773086	1773145	.	+	.	ID=id3011;Note=8 probable transmembrane helices predicted for YE1573 by TMHMM2.0 at aa 35-54%2C 86-108%2C 121-143%2C 147-166%2C238-260%2C 287-309%2C 333-355 and 360-382;gbkey=misc_feature;gene=pqiA;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	1773239	1773307	.	+	.	ID=id3011;Note=8 probable transmembrane helices predicted for YE1573 by TMHMM2.0 at aa 35-54%2C 86-108%2C 121-143%2C 147-166%2C238-260%2C 287-309%2C 333-355 and 360-382;gbkey=misc_feature;gene=pqiA;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	1773344	1773412	.	+	.	ID=id3011;Note=8 probable transmembrane helices predicted for YE1573 by TMHMM2.0 at aa 35-54%2C 86-108%2C 121-143%2C 147-166%2C238-260%2C 287-309%2C 333-355 and 360-382;gbkey=misc_feature;gene=pqiA;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	1773422	1773481	.	+	.	ID=id3011;Note=8 probable transmembrane helices predicted for YE1573 by TMHMM2.0 at aa 35-54%2C 86-108%2C 121-143%2C 147-166%2C238-260%2C 287-309%2C 333-355 and 360-382;gbkey=misc_feature;gene=pqiA;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	1773695	1773763	.	+	.	ID=id3011;Note=8 probable transmembrane helices predicted for YE1573 by TMHMM2.0 at aa 35-54%2C 86-108%2C 121-143%2C 147-166%2C238-260%2C 287-309%2C 333-355 and 360-382;gbkey=misc_feature;gene=pqiA;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	1773842	1773910	.	+	.	ID=id3011;Note=8 probable transmembrane helices predicted for YE1573 by TMHMM2.0 at aa 35-54%2C 86-108%2C 121-143%2C 147-166%2C238-260%2C 287-309%2C 333-355 and 360-382;gbkey=misc_feature;gene=pqiA;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	1773980	1774048	.	+	.	ID=id3011;Note=8 probable transmembrane helices predicted for YE1573 by TMHMM2.0 at aa 35-54%2C 86-108%2C 121-143%2C 147-166%2C238-260%2C 287-309%2C 333-355 and 360-382;gbkey=misc_feature;gene=pqiA;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	1774061	1774129	.	+	.	ID=id3011;Note=8 probable transmembrane helices predicted for YE1573 by TMHMM2.0 at aa 35-54%2C 86-108%2C 121-143%2C 147-166%2C238-260%2C 287-309%2C 333-355 and 360-382;gbkey=misc_feature;gene=pqiA;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	1774215	1775840	.	+	.	ID=gene1561;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=YE1574
AM286415.1	EMBL	CDS	1774215	1775840	.	+	0	ID=cds1503;Parent=gene1561;Dbxref=EnsemblGenomes-Gn:YE1574,EnsemblGenomes-Tr:CAL11651,InterPro:IPR003399,UniProtKB/TrEMBL:A1JMR2,NCBI_GP:CAL11651.1;Name=CAL11651.1;gbkey=CDS;gene=pqiB;product=putative paraquat-inducible protein B;protein_id=CAL11651.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1774251	1774310	.	+	.	ID=id3012;Note=1 probable transmembrane helix predicted for YE1574 by TMHMM2.0 at aa 13-32;gbkey=misc_feature;gene=pqiB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1775837	1776388	.	+	.	ID=gene1562;Name=YE1575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1575
AM286415.1	EMBL	CDS	1775837	1776388	.	+	0	ID=cds1504;Parent=gene1562;Dbxref=EnsemblGenomes-Gn:YE1575,EnsemblGenomes-Tr:CAL11652,InterPro:IPR005586,UniProtKB/TrEMBL:A1JMR5,NCBI_GP:CAL11652.1;Name=CAL11652.1;gbkey=CDS;product=putative lipoprotein protein;protein_id=CAL11652.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1775852	1776376	.	+	.	ID=id3013;Note=Pfam match to entry PF03886 DUF330%2C Protein of unknown function (DUF330)%2C score 221.3%2C E-value 9.4e-64;gbkey=misc_feature;inference=protein motif:PFAM:PF03886
AM286415.1	EMBL	sequence_feature	1775852	1775884	.	+	.	ID=id3014;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1776892	1778166	.	-	.	ID=gene1563;Name=YE1576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1576
AM286415.1	EMBL	CDS	1776892	1778166	.	-	0	ID=cds1505;Parent=gene1563;Dbxref=EnsemblGenomes-Gn:YE1576,EnsemblGenomes-Tr:CAL11653,GOA:A1JMR9,InterPro:IPR014030,InterPro:IPR014031,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR017568,InterPro:IPR018201,UniProtKB/TrEMBL:A1JMR9,NCBI_GP:CAL11653.1;Name=CAL11653.1;gbkey=CDS;product=putative 3-oxoacyl-[acyl-carrier-protein] synthase II;protein_id=CAL11653.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1776898	1777374	.	-	.	ID=id3015;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2CBeta-ketoacyl synthase%2C C-terminal domain%2C score 214.5%2CE-value 1e-61;gbkey=misc_feature;inference=protein motif:PFAM:PF02801
AM286415.1	EMBL	sequence_feature	1777282	1777362	.	-	.	ID=id3016;Note=PS00107 Protein kinases ATP-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00107
AM286415.1	EMBL	sequence_feature	1777396	1778160	.	-	.	ID=id3017;Note=Pfam match to entry PF00109 ketoacyl-synt%2CBeta-ketoacyl synthase%2C N-terminal domain%2C score 248.2%2CE-value 7.4e-72;gbkey=misc_feature;inference=protein motif:PFAM:PF00109
AM286415.1	EMBL	sequence_feature	1777627	1777677	.	-	.	ID=id3018;Note=PS00606 Beta-ketoacyl synthases active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00606
AM286415.1	EMBL	gene	1778166	1778708	.	-	.	ID=gene1564;Name=YE1577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1577
AM286415.1	EMBL	CDS	1778166	1778708	.	-	0	ID=cds1506;Parent=gene1564;Dbxref=EnsemblGenomes-Gn:YE1577,EnsemblGenomes-Tr:CAL11654,InterPro:IPR002577,InterPro:IPR011991,UniProtKB/TrEMBL:A1JMS3,NCBI_GP:CAL11654.1;Name=CAL11654.1;Note=Similar to Rhizobium loti hypothetical protein Mll2592 SWALL:Q98I32 (EMBL:AP003000) (182 aa) fasta scores: E(): 6.9e-31%2C 49.67 38d in 153 aa and Pseudomonas aeruginosa hypothetical protein Pa1374 SWALL:Q9I3X0 (EMBL:AE004567) (168 aa) fasta scores: E(): 1.4e-30%2C49.69 38d in 163 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003000;product=conserved hypothetical protein;protein_id=CAL11654.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1778385	1778654	.	-	.	ID=id3019;Note=Pfam match to entry PF01638 DUF24%2C Transcriptional regulator%2C score 63.5%2C E-value 3e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF01638
AM286415.1	EMBL	gene	1778898	1779416	.	-	.	ID=gene1565;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=YE1578
AM286415.1	EMBL	CDS	1778898	1779416	.	-	0	ID=cds1507;Parent=gene1565;Dbxref=EnsemblGenomes-Gn:YE1578,EnsemblGenomes-Tr:CAL11655,GOA:A1JMS5,InterPro:IPR010083,InterPro:IPR013114,InterPro:IPR029069,NCBI_GP:CAL11655.1;Name=CAL11655.1;gbkey=CDS;gene=fabA;product=3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase;protein_id=CAL11655.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1778946	1779371	.	-	.	ID=id3020;Note=Pfam match to entry PF01377 Thioester_dehyd%2CThioester dehydrase%2C score 245.6%2C E-value 4.5e-71;gbkey=misc_feature;gene=fabA;inference=protein motif:PFAM:PF01377
AM286415.1	EMBL	gene	1779485	1781257	.	-	.	ID=gene1566;Name=YE1579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1579
AM286415.1	EMBL	CDS	1779485	1781257	.	-	0	ID=cds1508;Parent=gene1566;Dbxref=EnsemblGenomes-Gn:YE1579,EnsemblGenomes-Tr:CAL11656,GOA:A1JMS8,InterPro:IPR008269,InterPro:IPR014721,InterPro:IPR020568,InterPro:IPR027065,UniProtKB/TrEMBL:A1JMS8,NCBI_GP:CAL11656.1;Name=CAL11656.1;gbkey=CDS;product=putative Lon protease;protein_id=CAL11656.1;transl_table=11
AM286415.1	EMBL	gene	1781447	1781902	.	+	.	ID=gene1567;Name=YE1580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1580
AM286415.1	EMBL	CDS	1781447	1781902	.	+	0	ID=cds1509;Parent=gene1567;Dbxref=EnsemblGenomes-Gn:YE1580,EnsemblGenomes-Tr:CAL11657,GOA:A1JMT1,InterPro:IPR009390,NCBI_GP:CAL11657.1;Name=CAL11657.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11657.1;transl_table=11
AM286415.1	EMBL	gene	1782034	1783107	.	-	.	ID=gene1568;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;gene_synonym=con,tolG,tut;locus_tag=YE1581
AM286415.1	EMBL	CDS	1782034	1783107	.	-	0	ID=cds1510;Parent=gene1568;Dbxref=EnsemblGenomes-Gn:YE1581,EnsemblGenomes-Tr:CAL11658,GOA:A1JMT3,InterPro:IPR000498,InterPro:IPR002368,InterPro:IPR006664,InterPro:IPR006665,InterPro:IPR006690,InterPro:IPR011250,UniProtKB/TrEMBL:A1JMT3,NCBI_GP:CAL11658.1;Name=CAL11658.1;gbkey=CDS;gene=ompA;product=putative outer membrane porin A protein;protein_id=CAL11658.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1782118	1782411	.	-	.	ID=id3021;Note=Pfam match to entry PF00691 OmpA%2C OmpA family %2Cscore 151.0%2C E-value 1.3e-42;gbkey=misc_feature;gene=ompA;inference=protein motif:PFAM:PF00691
AM286415.1	EMBL	sequence_feature	1782490	1783092	.	-	.	ID=id3022;Note=Pfam match to entry PF01389 OmpA_membrane%2COmpA-like transmembrane domain%2C score 362.8%2C E-value 2.4e-106;gbkey=misc_feature;gene=ompA;inference=protein motif:PFAM:PF01389
AM286415.1	EMBL	gene	1783465	1783971	.	-	.	ID=gene1569;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;gene_synonym=sfiA;locus_tag=YE1582
AM286415.1	EMBL	CDS	1783465	1783971	.	-	0	ID=cds1511;Parent=gene1569;Dbxref=EnsemblGenomes-Gn:YE1582,EnsemblGenomes-Tr:CAL11659,GOA:A1JMT8,InterPro:IPR004596,InterPro:IPR027417,NCBI_GP:CAL11659.1;Name=CAL11659.1;gbkey=CDS;gene=sulA;product=putative cell division inhibitor;protein_id=CAL11659.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1783612	1783965	.	-	.	ID=id3023;Note=Pfam match to entry PF03846 SulA%2C Cell division inhibitor SulA%2C score 220.0%2C E-value 2.3e-63;gbkey=misc_feature;gene=sulA;inference=protein motif:PFAM:PF03846
AM286415.1	EMBL	gene	1784201	1784836	.	+	.	ID=gene1570;Name=YE1583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1583
AM286415.1	EMBL	CDS	1784201	1784836	.	+	0	ID=cds1512;Parent=gene1570;Dbxref=EnsemblGenomes-Gn:YE1583,EnsemblGenomes-Tr:CAL11660,InterPro:IPR007076,InterPro:IPR007077,InterPro:IPR026256,UniProtKB/TrEMBL:A1JMU0,NCBI_GP:CAL11660.1;Name=CAL11660.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11660.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1784690	1784758	.	+	.	ID=id3024;Note=1 probable transmembrane helix predicted for YE1583 by TMHMM2.0 at aa 164-186;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1784873	1787008	.	-	.	ID=gene1571;Name=YE1584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1584
AM286415.1	EMBL	CDS	1784873	1787008	.	-	0	ID=cds1513;Parent=gene1571;Dbxref=EnsemblGenomes-Gn:YE1584,EnsemblGenomes-Tr:CAL11661,InterPro:IPR010019,InterPro:IPR010020,UniProtKB/TrEMBL:A1JMU4,NCBI_GP:CAL11661.1;Name=CAL11661.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11661.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1786898	1786966	.	-	.	ID=id3025;Note=9 probable transmembrane helices predicted for YE1584 by TMHMM2.0 at aa 15-37%2C 68-87%2C 91-110%2C 117-139%2C143-165%2C 439-458%2C 463-480%2C 485-504 and 514-533;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	1786748	1786807	.	-	.	ID=id3025;Note=9 probable transmembrane helices predicted for YE1584 by TMHMM2.0 at aa 15-37%2C 68-87%2C 91-110%2C 117-139%2C143-165%2C 439-458%2C 463-480%2C 485-504 and 514-533;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	1786679	1786738	.	-	.	ID=id3025;Note=9 probable transmembrane helices predicted for YE1584 by TMHMM2.0 at aa 15-37%2C 68-87%2C 91-110%2C 117-139%2C143-165%2C 439-458%2C 463-480%2C 485-504 and 514-533;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	1786592	1786660	.	-	.	ID=id3025;Note=9 probable transmembrane helices predicted for YE1584 by TMHMM2.0 at aa 15-37%2C 68-87%2C 91-110%2C 117-139%2C143-165%2C 439-458%2C 463-480%2C 485-504 and 514-533;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	1786514	1786582	.	-	.	ID=id3025;Note=9 probable transmembrane helices predicted for YE1584 by TMHMM2.0 at aa 15-37%2C 68-87%2C 91-110%2C 117-139%2C143-165%2C 439-458%2C 463-480%2C 485-504 and 514-533;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	1785635	1785694	.	-	.	ID=id3025;Note=9 probable transmembrane helices predicted for YE1584 by TMHMM2.0 at aa 15-37%2C 68-87%2C 91-110%2C 117-139%2C143-165%2C 439-458%2C 463-480%2C 485-504 and 514-533;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	1785569	1785622	.	-	.	ID=id3025;Note=9 probable transmembrane helices predicted for YE1584 by TMHMM2.0 at aa 15-37%2C 68-87%2C 91-110%2C 117-139%2C143-165%2C 439-458%2C 463-480%2C 485-504 and 514-533;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	1785497	1785556	.	-	.	ID=id3025;Note=9 probable transmembrane helices predicted for YE1584 by TMHMM2.0 at aa 15-37%2C 68-87%2C 91-110%2C 117-139%2C143-165%2C 439-458%2C 463-480%2C 485-504 and 514-533;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	1785410	1785469	.	-	.	ID=id3025;Note=9 probable transmembrane helices predicted for YE1584 by TMHMM2.0 at aa 15-37%2C 68-87%2C 91-110%2C 117-139%2C143-165%2C 439-458%2C 463-480%2C 485-504 and 514-533;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	1785701	1785778	.	-	.	ID=id3026;Note=PS00217 Sugar transport proteins signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00217
AM286415.1	EMBL	gene	1787033	1787485	.	-	.	ID=gene1572;Name=YE1585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1585
AM286415.1	EMBL	CDS	1787033	1787485	.	-	0	ID=cds1514;Parent=gene1572;Dbxref=EnsemblGenomes-Gn:YE1585,EnsemblGenomes-Tr:CAL11662,InterPro:IPR005185,UniProtKB/TrEMBL:A1JMU8,NCBI_GP:CAL11662.1;Name=CAL11662.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11662.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1787090	1787260	.	-	.	ID=id3027;Note=Pfam match to entry PF03733 DUF307%2C Domain of unknown function (DUF307)%2C score 112.5%2C E-value 5.1e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF03733
AM286415.1	EMBL	sequence_feature	1787384	1787452	.	-	.	ID=id3028;Note=3 probable transmembrane helices predicted for YE1585 by TMHMM2.0 at aa 12-34%2C 70-92 and 99-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1787210	1787278	.	-	.	ID=id3028;Note=3 probable transmembrane helices predicted for YE1585 by TMHMM2.0 at aa 12-34%2C 70-92 and 99-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1787123	1787191	.	-	.	ID=id3028;Note=3 probable transmembrane helices predicted for YE1585 by TMHMM2.0 at aa 12-34%2C 70-92 and 99-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	1787309	1787479	.	-	.	ID=id3029;Note=Pfam match to entry PF03733 DUF307%2C Domain of unknown function (DUF307)%2C score 73.2%2C E-value 3.6e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF03733
AM286415.1	EMBL	gene	1787680	1789734	.	+	.	ID=gene1573;Name=YE1586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1586
AM286415.1	EMBL	CDS	1787680	1789734	.	+	0	ID=cds1515;Parent=gene1573;Dbxref=EnsemblGenomes-Gn:YE1586,EnsemblGenomes-Tr:CAL11663,GOA:A1JMV1,InterPro:IPR000212,InterPro:IPR014016,InterPro:IPR014017,InterPro:IPR022161,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMV1,NCBI_GP:CAL11663.1;Name=CAL11663.1;gbkey=CDS;product=putative helicase IV;protein_id=CAL11663.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1788268	1789620	.	+	.	ID=id3030;Note=Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase%2C score 60.6%2C E-value 3.1e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00580
AM286415.1	EMBL	sequence_feature	1788325	1788348	.	+	.	ID=id3031;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1789797	1790255	.	-	.	ID=gene1574;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=YE1587
AM286415.1	EMBL	CDS	1789797	1790255	.	-	0	ID=cds1516;Parent=gene1574;Dbxref=EnsemblGenomes-Gn:YE1587,EnsemblGenomes-Tr:CAL11664,GOA:A1JMV3,InterPro:IPR004363,InterPro:IPR011607,InterPro:IPR018148,NCBI_GP:CAL11664.1;Name=CAL11664.1;gbkey=CDS;gene=mgsA;product=methylglyoxal synthase;protein_id=CAL11664.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1789902	1790213	.	-	.	ID=id3032;Note=Pfam match to entry PF02142 MGS%2C MGS-like domain %2Cscore 102.6%2C E-value 5e-28;gbkey=misc_feature;gene=mgsA;inference=protein motif:PFAM:PF02142
AM286415.1	EMBL	gene	1790459	1791127	.	-	.	ID=gene1575;Name=YE1588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1588
AM286415.1	EMBL	CDS	1790459	1791127	.	-	0	ID=cds1517;Parent=gene1575;Dbxref=EnsemblGenomes-Gn:YE1588,EnsemblGenomes-Tr:CAL11665,InterPro:IPR018635,UniProtKB/TrEMBL:A1JMV4,NCBI_GP:CAL11665.1;Name=CAL11665.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11665.1;transl_table=11
AM286415.1	EMBL	gene	1791459	1791875	.	+	.	ID=gene1576;Name=YE1589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1589
AM286415.1	EMBL	CDS	1791459	1791875	.	+	0	ID=cds1518;Parent=gene1576;Dbxref=EnsemblGenomes-Gn:YE1589,EnsemblGenomes-Tr:CAL11666,GOA:A1JMV6,InterPro:IPR003781,InterPro:IPR016040,UniProtKB/TrEMBL:A1JMV6,NCBI_GP:CAL11666.1;Name=CAL11666.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11666.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1791486	1791815	.	+	.	ID=id3033;Note=Pfam match to entry PF02629 CoA_binding%2C CoA binding domain%2C score 86.4%2C E-value 3.9e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF02629
AM286415.1	EMBL	repeat_region	1791929	1793364	.	+	.	ID=id3034;Note=IS1664;gbkey=repeat_region
AM286415.1	EMBL	gene	1791980	1792495	.	+	.	ID=gene1577;Name=YE1590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1590
AM286415.1	EMBL	CDS	1791980	1792495	.	+	0	ID=cds1519;Parent=gene1577;Dbxref=EnsemblGenomes-Gn:YE1590,EnsemblGenomes-Tr:CAL11667,GOA:A1JMV7,InterPro:IPR009057,UniProtKB/TrEMBL:A1JMV7,NCBI_GP:CAL11667.1;Name=CAL11667.1;Note=Similar to Yersinia pestis insertion element IS1661 DNA-binding protein YPO0996 SWALL:Q8ZHA8 (EMBL:AJ414145)(178 aa) fasta scores: E(): 8.6e-14%2C 36.51 id in 178 aa%2C and to Klebsiella pneumoniae OrfA SWALL:Q9AG22 (EMBL:AF345899) (173 aa) fasta scores: E(): 1e-18%2C 40.22 38d in 174 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=insertion element IS1664 protein;protein_id=CAL11667.1;transl_table=11
AM286415.1	EMBL	gene	1792531	1793349	.	+	.	ID=gene1578;Name=YE1591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1591
AM286415.1	EMBL	CDS	1792531	1793349	.	+	0	ID=cds1520;Parent=gene1578;Dbxref=EnsemblGenomes-Gn:YE1591,EnsemblGenomes-Tr:CAL11668,GOA:A1JMV9,InterPro:IPR001584,InterPro:IPR012337,InterPro:IPR025948,UniProtKB/TrEMBL:A1JMV9,NCBI_GP:CAL11668.1;Name=CAL11668.1;Note=Similar to Yersinia pestis transposase for insertion sequence IS1661 SWALL:Q8XF80 (EMBL:AJ414160) (261 aa) fasta scores: E(): 5.9e-46%2C 50.19 38d in 257 aa. Also similar to Ralstonia solanacearum ISrsoII-transposase OrfB protein SWALL:Q8XX51 (EMBL:AL646069) (269 aa) fasta scores: E(): 7e-61%2C 58.11 38d in 265 aa%2C and to Escherichia coli putative transposase InsK for insertion sequence element IS150 SWALL:INSK_ECOLI (SWALL:P19769) (283 aa) fasta scores: E(): 7.1e-58%2C 53.43 38d in 262 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P19769;product=putative transposase for IS1664 element;protein_id=CAL11668.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1792834	1793313	.	+	.	ID=id3035;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 139.2%2C E-value 4.8e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	1793399	1793716	.	-	.	ID=gene1579;Name=YE1592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1592
AM286415.1	EMBL	CDS	1793399	1793716	.	-	0	ID=cds1521;Parent=gene1579;Dbxref=EnsemblGenomes-Gn:YE1592,EnsemblGenomes-Tr:CAL11669,GOA:A1JMW1,InterPro:IPR011722,InterPro:IPR022866,NCBI_GP:CAL11669.1;Name=CAL11669.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11669.1;transl_table=11
AM286415.1	EMBL	gene	1793779	1794963	.	-	.	ID=gene1580;Name=YE1593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1593
AM286415.1	EMBL	CDS	1793779	1794963	.	-	0	ID=cds1522;Parent=gene1580;Dbxref=EnsemblGenomes-Gn:YE1593,EnsemblGenomes-Tr:CAL11670,GOA:A1JMW5,InterPro:IPR002478,InterPro:IPR015947,InterPro:IPR019614,InterPro:IPR023542,InterPro:IPR029063,NCBI_GP:CAL11670.1;Name=CAL11670.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11670.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1793782	1793793	.	-	.	ID=id3036;Note=PS00294 Prenyl group binding site (CAAX box).;gbkey=misc_feature;inference=protein motif:Prosite:PS00294
AM286415.1	EMBL	gene	1795183	1795428	.	+	.	ID=gene1581;Name=YE1594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1594
AM286415.1	EMBL	CDS	1795183	1795428	.	+	0	ID=cds1523;Parent=gene1581;Dbxref=EnsemblGenomes-Gn:YE1594,EnsemblGenomes-Tr:CAL11671,UniProtKB/TrEMBL:A1JMW7,NCBI_GP:CAL11671.1;Name=CAL11671.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11671.1;transl_table=11
AM286415.1	EMBL	gene	1795441	1795806	.	+	.	ID=gene1582;Name=YE1595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1595
AM286415.1	EMBL	CDS	1795441	1795806	.	+	0	ID=cds1524;Parent=gene1582;Dbxref=EnsemblGenomes-Gn:YE1595,EnsemblGenomes-Tr:CAL11672,InterPro:IPR012427,UniProtKB/TrEMBL:A1JMW9,NCBI_GP:CAL11672.1;Name=CAL11672.1;Note=Weakly similar to Synechocystis sp. hypothetical protein Sll0939 SWALL:P72858 (EMBL:D90901) (125 aa) fasta scores: E(): 4.4e-15%2C 45.6 38d in 125 aa and Clostridium perfringens hypothetical protein Cpe0943 SWALL:Q8XLU7 (EMBL:AP003188) (114 aa) fasta scores: E(): 2.4e-05%2C28.82 38d in 111 aa;gbkey=CDS;inference=similar to sequence:INSDC:D90901;product=putative membrane protein;protein_id=CAL11672.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1795468	1795536	.	+	.	ID=id3037;Note=1 probable transmembrane helix predicted for YE1595 by TMHMM2.0 at aa 10-32;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1795826	1796104	.	+	.	ID=gene1583;Name=YE1596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1596
AM286415.1	EMBL	CDS	1795826	1796104	.	+	0	ID=cds1525;Parent=gene1583;Dbxref=EnsemblGenomes-Gn:YE1596,EnsemblGenomes-Tr:CAL11673,GOA:A1JMX0,InterPro:IPR001792,InterPro:IPR017968,InterPro:IPR020456,InterPro:IPR028627,NCBI_GP:CAL11673.1;Name=CAL11673.1;gbkey=CDS;product=putative acylphosphatase;protein_id=CAL11673.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1795832	1796095	.	+	.	ID=id3038;Note=Pfam match to entry PF00708 Acylphosphatase%2CAcylphosphatase%2C score 35.8%2C E-value 3.4e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00708
AM286415.1	EMBL	sequence_feature	1795853	1795885	.	+	.	ID=id3039;Note=PS00150 Acylphosphatase signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00150
AM286415.1	EMBL	sequence_feature	1795925	1795975	.	+	.	ID=id3040;Note=PS00151 Acylphosphatase signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00151
AM286415.1	EMBL	gene	1796132	1796458	.	-	.	ID=gene1584;Name=YE1597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1597
AM286415.1	EMBL	CDS	1796132	1796458	.	-	0	ID=cds1526;Parent=gene1584;Dbxref=EnsemblGenomes-Gn:YE1597,EnsemblGenomes-Tr:CAL11674,GOA:A1JMX3,InterPro:IPR007453,InterPro:IPR025526,UniProtKB/TrEMBL:A1JMX3,NCBI_GP:CAL11674.1;Name=CAL11674.1;gbkey=CDS;product=putative sulfite reductase subunit protein;protein_id=CAL11674.1;transl_table=11
AM286415.1	EMBL	gene	1796717	1796804	.	+	.	ID=gene1585;Name=tRNA-Ser (TGA);gbkey=Gene;gene=tRNA-Ser (TGA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	1796717	1796804	.	+	.	ID=rna74;Parent=gene1585;gbkey=tRNA;gene=tRNA-Ser (TGA);product=tRNA-Ser
AM286415.1	EMBL	exon	1796717	1796804	.	+	.	ID=id3041;Parent=rna74;gbkey=tRNA;gene=tRNA-Ser (TGA);product=tRNA-Ser
AM286415.1	EMBL	pseudogene	1797221	1797400	.	+	.	ID=gene1586;Name='yfrE;gbkey=Gene;gene='yfrE;gene_biotype=pseudogene;locus_tag=YE1598;pseudo=true
AM286415.1	EMBL	CDS	1797221	1797400	.	+	0	ID=cds1527;Parent=gene1586;Dbxref=PSEUDO:CAL11675.1;Note=Similar to the very C-termini of many nitrite reductases including: Yersinia enterocolitica YfrE protein SWALL:Q56924 (EMBL:X76082) (257 aa) fasta scores: E(): 1.5e-21%2C 87.69 38d in 65 aa and Escherichia coli O157:H7 formate-dependent nitrite reductase complex NrfG or z5675 or ecs5058 SWALL:NRFG_ECO57 (SWALL:Q8X5S3) (198 aa) fasta scores: E(): 1.2e-05%2C 40 38d in 55 aa. Note this CDS appears to be a gene remnant.;gbkey=CDS;gene='yfrE;inference=similar to sequence:UniProtKB:Q8X5S3;product=nitrite reductase gene remnant;pseudo=true;transl_table=11
AM286415.1	EMBL	gene	1798138	1798872	.	+	.	ID=gene1587;Name=yenR;gbkey=Gene;gene=yenR;gene_biotype=protein_coding;locus_tag=YE1599
AM286415.1	EMBL	CDS	1798138	1798872	.	+	0	ID=cds1528;Parent=gene1587;Dbxref=EnsemblGenomes-Gn:YE1599,EnsemblGenomes-Tr:CAL11676,GOA:A1JMX7,InterPro:IPR000792,InterPro:IPR005143,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JMX7,NCBI_GP:CAL11676.1;Name=CAL11676.1;gbkey=CDS;gene=yenR;product=quorum-sensing transcriptional activator;protein_id=CAL11676.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1798168	1798617	.	+	.	ID=id3042;Note=Pfam match to entry PF03472 Autoind_bind%2CAutoinducer binding domain%2C score 192.4%2C E-value 4.6e-55;gbkey=misc_feature;gene=yenR;inference=protein motif:PFAM:PF03472
AM286415.1	EMBL	sequence_feature	1798669	1798866	.	+	.	ID=id3043;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 53.6%2C E-value 2.8e-13;gbkey=misc_feature;gene=yenR;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	1798720	1798803	.	+	.	ID=id3044;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=yenR;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	sequence_feature	1798723	1798788	.	+	.	ID=id3045;Note=Predicted helix-turn-helix motif with score 1558.000%2C SD 4.49 at aa 196-217%2C sequence KTYAEISIILGIKRSTVKFHIG;gbkey=misc_feature;gene=yenR
AM286415.1	EMBL	gene	1798865	1799521	.	-	.	ID=gene1588;Name=yenI;gbkey=Gene;gene=yenI;gene_biotype=protein_coding;locus_tag=YE1600
AM286415.1	EMBL	CDS	1798865	1799521	.	-	0	ID=cds1529;Parent=gene1588;Dbxref=EnsemblGenomes-Gn:YE1600,EnsemblGenomes-Tr:CAL11677,GOA:A1JMX9,InterPro:IPR001690,InterPro:IPR016181,InterPro:IPR018311,UniProtKB/TrEMBL:A1JMX9,NCBI_GP:CAL11677.1;Name=CAL11677.1;gbkey=CDS;gene=yenI;product=N-acylhomoserine lactone synthase;protein_id=CAL11677.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1798946	1799488	.	-	.	ID=id3046;Note=Pfam match to entry PF00765 Autoind_synth%2CAutoinducer synthetase%2C score 420.5%2C E-value 1e-123;gbkey=misc_feature;gene=yenI;inference=protein motif:PFAM:PF00765
AM286415.1	EMBL	sequence_feature	1799366	1799443	.	-	.	ID=id3047;Note=PS00949 Autoinducers synthetases family signature.;gbkey=misc_feature;gene=yenI;inference=protein motif:Prosite:PS00949
AM286415.1	EMBL	gene	1799809	1800741	.	+	.	ID=gene1589;Name=YE1601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1601
AM286415.1	EMBL	CDS	1799809	1800741	.	+	0	ID=cds1530;Parent=gene1589;Dbxref=EnsemblGenomes-Gn:YE1601,EnsemblGenomes-Tr:CAL11678,GOA:A1JMY2,InterPro:IPR000620,UniProtKB/TrEMBL:A1JMY2,NCBI_GP:CAL11678.1;Name=CAL11678.1;Note=Similar to Salmonella typhimurium putative permease YifZ or stm4395 SWALL:Q8ZK79 (EMBL:AE008906) (308 aa) fasta scores: E(): 6.8e-79%2C 70.55 38d in 309 aa%2C and to Yersinia pestis putative membrane protein Ypo2455 SWALL:Q8ZDV0 (EMBL:AJ414152) (232 aa) fasta scores: E(): 4.8e-70%2C 90.86 38d in 219 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414152;product=exported membrane protein;protein_id=CAL11678.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1799875	1800279	.	+	.	ID=id3048;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 59.6%2C E-value 4.4e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	1799962	1800030	.	+	.	ID=id3049;Note=10 probable transmembrane helices predicted for YE1601 by TMHMM2.0 at aa 13-32%2C 52-74%2C 86-108%2C 113-132%2C139-161%2C 166-188%2C 201-223%2C 228-250%2C 257-279 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	1800064	1800132	.	+	.	ID=id3049;Note=10 probable transmembrane helices predicted for YE1601 by TMHMM2.0 at aa 13-32%2C 52-74%2C 86-108%2C 113-132%2C139-161%2C 166-188%2C 201-223%2C 228-250%2C 257-279 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	1800145	1800204	.	+	.	ID=id3049;Note=10 probable transmembrane helices predicted for YE1601 by TMHMM2.0 at aa 13-32%2C 52-74%2C 86-108%2C 113-132%2C139-161%2C 166-188%2C 201-223%2C 228-250%2C 257-279 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	1800223	1800291	.	+	.	ID=id3049;Note=10 probable transmembrane helices predicted for YE1601 by TMHMM2.0 at aa 13-32%2C 52-74%2C 86-108%2C 113-132%2C139-161%2C 166-188%2C 201-223%2C 228-250%2C 257-279 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	1800304	1800372	.	+	.	ID=id3049;Note=10 probable transmembrane helices predicted for YE1601 by TMHMM2.0 at aa 13-32%2C 52-74%2C 86-108%2C 113-132%2C139-161%2C 166-188%2C 201-223%2C 228-250%2C 257-279 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	1800409	1800477	.	+	.	ID=id3049;Note=10 probable transmembrane helices predicted for YE1601 by TMHMM2.0 at aa 13-32%2C 52-74%2C 86-108%2C 113-132%2C139-161%2C 166-188%2C 201-223%2C 228-250%2C 257-279 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	1800490	1800558	.	+	.	ID=id3049;Note=10 probable transmembrane helices predicted for YE1601 by TMHMM2.0 at aa 13-32%2C 52-74%2C 86-108%2C 113-132%2C139-161%2C 166-188%2C 201-223%2C 228-250%2C 257-279 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	1800577	1800645	.	+	.	ID=id3049;Note=10 probable transmembrane helices predicted for YE1601 by TMHMM2.0 at aa 13-32%2C 52-74%2C 86-108%2C 113-132%2C139-161%2C 166-188%2C 201-223%2C 228-250%2C 257-279 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	1800655	1800723	.	+	.	ID=id3049;Note=10 probable transmembrane helices predicted for YE1601 by TMHMM2.0 at aa 13-32%2C 52-74%2C 86-108%2C 113-132%2C139-161%2C 166-188%2C 201-223%2C 228-250%2C 257-279 and 283-305;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	1800046	1800111	.	+	.	ID=id3050;Note=Predicted helix-turn-helix motif with score 1190.000%2C SD 3.24 at aa 80-101%2C sequence KSQYKQIAILGLTQTTLQYVFF;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1800343	1800720	.	+	.	ID=id3051;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 68.9%2C E-value 7.2e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	1800852	1802579	.	-	.	ID=gene1590;Name=YE1602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1602
AM286415.1	EMBL	CDS	1800852	1802579	.	-	0	ID=cds1531;Parent=gene1590;Dbxref=EnsemblGenomes-Gn:YE1602,EnsemblGenomes-Tr:CAL11679,GOA:A1JMY5,InterPro:IPR005170,InterPro:IPR006037,InterPro:IPR006153,InterPro:IPR016166,InterPro:IPR016169,InterPro:IPR023729,NCBI_GP:CAL11679.1;Name=CAL11679.1;Note=Similar to many e.g. Escherichia coli putative Na+/H+ symporter YcgO or b1191 SWALL:YCGO_ECOLI (SWALL:P76007) (578 aa) fasta scores: E(): 6e-166%2C 75.86 id in 576 aa and Vibrio cholerae hypothetical protein Vc2703 vc2703 SWALL:Q9KNM9 (EMBL:AE004336) (581 aa) fasta scores: E(): 6.2e-133%2C 60.77 38d in 571 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76007;product=putative Na+ antiporter;protein_id=CAL11679.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1800864	1801106	.	-	.	ID=id3052;Note=Pfam match to entry PF03471 CorC_HlyC%2C Transporter associated domain%2C score 77.6%2C E-value 1.7e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF03471
AM286415.1	EMBL	sequence_feature	1801119	1801379	.	-	.	ID=id3053;Note=Pfam match to entry PF02080 TrkA-C%2C TrkA-C domain %2Cscore 72.8%2C E-value 4.7e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF02080
AM286415.1	EMBL	sequence_feature	1801398	1802552	.	-	.	ID=id3054;Note=Pfam match to entry PF00999 Na_H_Exchanger%2CSodium/hydrogen exchanger family%2C score 287.1%2C E-value 1.4e-83;gbkey=misc_feature;inference=protein motif:PFAM:PF00999
AM286415.1	EMBL	sequence_feature	1802511	1802570	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1802439	1802492	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1802358	1802426	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1802253	1802321	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1802157	1802225	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1801929	1801997	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1801818	1801886	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1801713	1801781	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1801617	1801685	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1801512	1801580	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1801431	1801499	.	-	.	ID=id3055;Note=11 probable transmembrane helices predicted for YE1602 by TMHMM2.0 at aa 4-23%2C 30-47%2C 52-74%2C 87-109%2C119-141%2C 195-217%2C 232-254%2C 267-289%2C 299-321%2C 334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	1802899	1803240	.	-	.	ID=gene1591;Name=YE1603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1603
AM286415.1	EMBL	CDS	1802899	1803240	.	-	0	ID=cds1532;Parent=gene1591;Dbxref=EnsemblGenomes-Gn:YE1603,EnsemblGenomes-Tr:CAL11680,UniProtKB/TrEMBL:A1JMY9,NCBI_GP:CAL11680.1;Name=CAL11680.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11680.1;transl_table=11
AM286415.1	EMBL	gene	1803355	1804494	.	-	.	ID=gene1592;Name=mdoC;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=YE1604
AM286415.1	EMBL	CDS	1803355	1804494	.	-	0	ID=cds1533;Parent=gene1592;Dbxref=EnsemblGenomes-Gn:YE1604,EnsemblGenomes-Tr:CAL11681,GOA:A1JMZ0,InterPro:IPR002656,UniProtKB/TrEMBL:A1JMZ0,NCBI_GP:CAL11681.1;Name=CAL11681.1;Note=Highly similar to Escherichia coli glucans biosynthesis protein MdoC or b1047 SWALL:MDOC_ECOLI (SWALL:P75920) (385 aa) fasta scores: E(): 5.5e-77%2C 55.08 id in 374 aa. Also similar to many other membrane proteins of undefined function e.g. Escherichia coli O157:H7 hypothetical protein YmdD or z1681 or ecs1425 SWALL:Q8X9I6 (EMBL:AE005315) (385 aa) fasta scores: E(): 1.4e-76%2C54.81 38d in 374 aa;gbkey=CDS;gene=mdoC;inference=similar to sequence:UniProtKB:P75920;product=osmoregulated periplasmic glucan biosynthetic protein;protein_id=CAL11681.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1804378	1804446	.	-	.	ID=id3056;Note=10 probable transmembrane helices predicted for YE1604 by TMHMM2.0 at aa 17-39%2C 54-75%2C 88-110%2C 140-157%2C177-199%2C 214-233%2C 240-262%2C 277-299%2C 308-330 and 340-357;gbkey=misc_feature;gene=mdoC;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1804270	1804335	.	-	.	ID=id3056;Note=10 probable transmembrane helices predicted for YE1604 by TMHMM2.0 at aa 17-39%2C 54-75%2C 88-110%2C 140-157%2C177-199%2C 214-233%2C 240-262%2C 277-299%2C 308-330 and 340-357;gbkey=misc_feature;gene=mdoC;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1804165	1804233	.	-	.	ID=id3056;Note=10 probable transmembrane helices predicted for YE1604 by TMHMM2.0 at aa 17-39%2C 54-75%2C 88-110%2C 140-157%2C177-199%2C 214-233%2C 240-262%2C 277-299%2C 308-330 and 340-357;gbkey=misc_feature;gene=mdoC;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1804024	1804077	.	-	.	ID=id3056;Note=10 probable transmembrane helices predicted for YE1604 by TMHMM2.0 at aa 17-39%2C 54-75%2C 88-110%2C 140-157%2C177-199%2C 214-233%2C 240-262%2C 277-299%2C 308-330 and 340-357;gbkey=misc_feature;gene=mdoC;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1803898	1803966	.	-	.	ID=id3056;Note=10 probable transmembrane helices predicted for YE1604 by TMHMM2.0 at aa 17-39%2C 54-75%2C 88-110%2C 140-157%2C177-199%2C 214-233%2C 240-262%2C 277-299%2C 308-330 and 340-357;gbkey=misc_feature;gene=mdoC;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1803796	1803855	.	-	.	ID=id3056;Note=10 probable transmembrane helices predicted for YE1604 by TMHMM2.0 at aa 17-39%2C 54-75%2C 88-110%2C 140-157%2C177-199%2C 214-233%2C 240-262%2C 277-299%2C 308-330 and 340-357;gbkey=misc_feature;gene=mdoC;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1803709	1803777	.	-	.	ID=id3056;Note=10 probable transmembrane helices predicted for YE1604 by TMHMM2.0 at aa 17-39%2C 54-75%2C 88-110%2C 140-157%2C177-199%2C 214-233%2C 240-262%2C 277-299%2C 308-330 and 340-357;gbkey=misc_feature;gene=mdoC;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1803598	1803666	.	-	.	ID=id3056;Note=10 probable transmembrane helices predicted for YE1604 by TMHMM2.0 at aa 17-39%2C 54-75%2C 88-110%2C 140-157%2C177-199%2C 214-233%2C 240-262%2C 277-299%2C 308-330 and 340-357;gbkey=misc_feature;gene=mdoC;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1803505	1803573	.	-	.	ID=id3056;Note=10 probable transmembrane helices predicted for YE1604 by TMHMM2.0 at aa 17-39%2C 54-75%2C 88-110%2C 140-157%2C177-199%2C 214-233%2C 240-262%2C 277-299%2C 308-330 and 340-357;gbkey=misc_feature;gene=mdoC;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1803424	1803477	.	-	.	ID=id3056;Note=10 probable transmembrane helices predicted for YE1604 by TMHMM2.0 at aa 17-39%2C 54-75%2C 88-110%2C 140-157%2C177-199%2C 214-233%2C 240-262%2C 277-299%2C 308-330 and 340-357;gbkey=misc_feature;gene=mdoC;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	1804827	1806380	.	+	.	ID=gene1593;Name=mdoG;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;locus_tag=YE1605
AM286415.1	EMBL	CDS	1804827	1806380	.	+	0	ID=cds1534;Parent=gene1593;Dbxref=EnsemblGenomes-Gn:YE1605,EnsemblGenomes-Tr:CAL11682,GOA:A1JMZ3,InterPro:IPR007444,InterPro:IPR011013,InterPro:IPR013783,InterPro:IPR014438,InterPro:IPR014718,InterPro:IPR014756,InterPro:IPR023704,UniProtKB/TrEMBL:A1JMZ3,NCBI_GP:CAL11682.1;Name=CAL11682.1;Note=Similar to Escherichia coli periplasmic glucans biosynthesis protein MdoG precursor or b1048 SWALL:MDOG_ECOLI (SWALL:P33136) (511 aa) fasta scores: E(): 1.3e-167%2C 75.68 38d in 510 aa%2C and to Erwinia chrysanthemi OpgG glucan synthesis operon protein SWALL:Q9F496 (EMBL:AJ294718) (522 aa) fasta scores: E(): 1.8e-171%2C 78.71 38d in 512 aa;gbkey=CDS;gene=mdoG;inference=similar to sequence:UniProtKB:P33136;product=osmoregulated periplasmic glucan biosynthetic protein;protein_id=CAL11682.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1804938	1804961	.	+	.	ID=id3057;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=mdoG;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1806418	1808955	.	+	.	ID=gene1594;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=YE1606
AM286415.1	EMBL	CDS	1806418	1808955	.	+	0	ID=cds1535;Parent=gene1594;Dbxref=EnsemblGenomes-Gn:YE1606,EnsemblGenomes-Tr:CAL11683,GOA:A1JMZ5,InterPro:IPR001173,InterPro:IPR023725,InterPro:IPR029044,UniProtKB/TrEMBL:A1JMZ5,NCBI_GP:CAL11683.1;Name=CAL11683.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 periplasmic glucans biosynthesis protein MdoH or b1049 or z1684 or ecs1427 SWALL:MDOH_ECOLI (SWALL:P33137) (847 aa) fasta scores: E(): 0%2C 74.22 38d in 838 aa and to Erwinia chrysanthemi OpgH glucan synthesis operon protein SWALL:Q9F495 (EMBL:AJ294718) (850 aa) fasta scores: E(): 0%2C 74.91 38d in 837 aa;gbkey=CDS;gene=mdoH;inference=similar to sequence:UniProtKB:P33137;product=osmoregulated periplasmic glucan biosynthetic protein;protein_id=CAL11683.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1806838	1806906	.	+	.	ID=id3058;Note=6 probable transmembrane helices predicted for YE1606 by TMHMM2.0 at aa 141-163%2C 196-218%2C 520-542%2C570-592%2C 605-627 and 682-704;gbkey=misc_feature;gene=mdoH;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1807003	1807071	.	+	.	ID=id3058;Note=6 probable transmembrane helices predicted for YE1606 by TMHMM2.0 at aa 141-163%2C 196-218%2C 520-542%2C570-592%2C 605-627 and 682-704;gbkey=misc_feature;gene=mdoH;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1807975	1808043	.	+	.	ID=id3058;Note=6 probable transmembrane helices predicted for YE1606 by TMHMM2.0 at aa 141-163%2C 196-218%2C 520-542%2C570-592%2C 605-627 and 682-704;gbkey=misc_feature;gene=mdoH;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1808125	1808193	.	+	.	ID=id3058;Note=6 probable transmembrane helices predicted for YE1606 by TMHMM2.0 at aa 141-163%2C 196-218%2C 520-542%2C570-592%2C 605-627 and 682-704;gbkey=misc_feature;gene=mdoH;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1808230	1808298	.	+	.	ID=id3058;Note=6 probable transmembrane helices predicted for YE1606 by TMHMM2.0 at aa 141-163%2C 196-218%2C 520-542%2C570-592%2C 605-627 and 682-704;gbkey=misc_feature;gene=mdoH;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1808461	1808529	.	+	.	ID=id3058;Note=6 probable transmembrane helices predicted for YE1606 by TMHMM2.0 at aa 141-163%2C 196-218%2C 520-542%2C570-592%2C 605-627 and 682-704;gbkey=misc_feature;gene=mdoH;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1807156	1807713	.	+	.	ID=id3059;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 49.4%2C E-value 5.3e-12;gbkey=misc_feature;gene=mdoH;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	1810022	1811557	.	-	.	ID=gene1595;Name=YE1609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1609
AM286415.1	EMBL	CDS	1810022	1811557	.	-	0	ID=cds1536;Parent=gene1595;Dbxref=EnsemblGenomes-Gn:YE1609,EnsemblGenomes-Tr:CAL11684,GOA:A1JMZ9,InterPro:IPR000109,InterPro:IPR005279,InterPro:IPR016196,InterPro:IPR018456,InterPro:IPR020846,UniProtKB/TrEMBL:A1JMZ9,NCBI_GP:CAL11684.1;Name=CAL11684.1;Note=Similar to many including: Lactococcus lactis di-/tripeptide transporter DtpT or ll0702 SWALL:DTPT_LACLA (SWALL:P36574) (497 aa) fasta scores: E(): 8.3e-54%2C 36.43 id in 516 aa and to Listeria monocytogenes hypothetical protein Lmo0555 SWALL:Q8Y9H3 (EMBL:AL591975) (492 aa) fasta scores: E(): 6.6e-58%2C 37.41 38d in 457 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P36574;product=putative peptide transport protein;protein_id=CAL11684.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1811390	1811458	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	1811309	1811377	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	1811216	1811284	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	1811135	1811203	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	1811030	1811098	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	1810949	1811017	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	1810796	1810864	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	1810715	1810783	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	1810625	1810678	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	1810481	1810549	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	1810379	1810447	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	1810268	1810336	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	1810163	1810231	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	1810067	1810135	.	-	.	ID=id3060;Note=14 probable transmembrane helices predicted for YE1609 by TMHMM2.0 at aa 34-56%2C 61-83%2C 92-114%2C 119-141%2C154-176%2C 181-203%2C 232-254%2C 259-281%2C 294-311%2C 337-359%2C371-393%2C 408-430%2C 443-465 and 475-497;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	sequence_feature	1810193	1811290	.	-	.	ID=id3061;Note=Pfam match to entry PF00854 PTR2%2C POT family %2Cscore 168.6%2C E-value 6.6e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF00854
AM286415.1	EMBL	sequence_feature	1811057	1811095	.	-	.	ID=id3062;Note=PS01023 PTR2 family proton/oligopeptide symporters signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01023
AM286415.1	EMBL	sequence_feature	1811249	1811323	.	-	.	ID=id3063;Note=PS01022 PTR2 family proton/oligopeptide symporters signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS01022
AM286415.1	EMBL	gene	1811991	1813235	.	-	.	ID=gene1596;Name=YE1610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1610
AM286415.1	EMBL	CDS	1811991	1813235	.	-	0	ID=cds1537;Parent=gene1596;Dbxref=EnsemblGenomes-Gn:YE1610,EnsemblGenomes-Tr:CAL11685,GOA:A1JN04,InterPro:IPR001958,InterPro:IPR005828,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,InterPro:IPR023692,NCBI_GP:CAL11685.1;Name=CAL11685.1;Note=Similar to many MFS-family membrane transport proteins including: Salmonella typhimurium putative MFS family transport protein YceE or Stm1154 SWALL:Q8ZQ25 (EMBL:AE008750) (404 aa) fasta scores: E(): 5.9e-124%2C81.54 38d in 401 aa and to Lactococcus lactis multi-drug resistance efflux pump PmrA or ll0666 SWALL:PMRA_LACLA (SWALL:P58120) (405 aa) fasta scores: E(): 4.8e-69%2C 46.17 id in 405 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P58120;product=putative MFS-family transport protein;protein_id=CAL11685.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1812012	1813202	.	-	.	ID=id3064;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -67.2%2C E-value 1.8e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	1813020	1813088	.	-	.	ID=id3065;Note=10 probable transmembrane helices predicted for YE1610 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-130%2C142-164%2C 169-191%2C 218-240%2C 255-277%2C 289-311 and 374-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	1812927	1812986	.	-	.	ID=id3065;Note=10 probable transmembrane helices predicted for YE1610 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-130%2C142-164%2C 169-191%2C 218-240%2C 255-277%2C 289-311 and 374-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	1812846	1812914	.	-	.	ID=id3065;Note=10 probable transmembrane helices predicted for YE1610 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-130%2C142-164%2C 169-191%2C 218-240%2C 255-277%2C 289-311 and 374-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	1812744	1812812	.	-	.	ID=id3065;Note=10 probable transmembrane helices predicted for YE1610 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-130%2C142-164%2C 169-191%2C 218-240%2C 255-277%2C 289-311 and 374-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	1812663	1812731	.	-	.	ID=id3065;Note=10 probable transmembrane helices predicted for YE1610 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-130%2C142-164%2C 169-191%2C 218-240%2C 255-277%2C 289-311 and 374-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	1812516	1812584	.	-	.	ID=id3065;Note=10 probable transmembrane helices predicted for YE1610 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-130%2C142-164%2C 169-191%2C 218-240%2C 255-277%2C 289-311 and 374-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	1812405	1812473	.	-	.	ID=id3065;Note=10 probable transmembrane helices predicted for YE1610 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-130%2C142-164%2C 169-191%2C 218-240%2C 255-277%2C 289-311 and 374-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	1812303	1812371	.	-	.	ID=id3065;Note=10 probable transmembrane helices predicted for YE1610 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-130%2C142-164%2C 169-191%2C 218-240%2C 255-277%2C 289-311 and 374-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	1812048	1812116	.	-	.	ID=id3065;Note=10 probable transmembrane helices predicted for YE1610 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-130%2C142-164%2C 169-191%2C 218-240%2C 255-277%2C 289-311 and 374-396;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	1813531	1813965	.	-	.	ID=gene1597;Name=YE1611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1611
AM286415.1	EMBL	CDS	1813531	1813965	.	-	0	ID=cds1538;Parent=gene1597;Dbxref=EnsemblGenomes-Gn:YE1611,EnsemblGenomes-Tr:CAL11686,InterPro:IPR011637,UniProtKB/TrEMBL:A1JN07,NCBI_GP:CAL11686.1;Name=CAL11686.1;Note=Weakly similar to several proteins of undefined function e.g. Vibrio cholerae hypothetical protein Vca1019 SWALL:Q9KKT1 (EMBL:AE004428) (148 aa) fasta scores: E(): 3.7e-05%2C 32.6 38d in 138 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004428;product=putative membrane protein;protein_id=CAL11686.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1813837	1813905	.	-	.	ID=id3066;Note=4 probable transmembrane helices predicted for YE1611 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109 and 119-138;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1813726	1813794	.	-	.	ID=id3066;Note=4 probable transmembrane helices predicted for YE1611 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109 and 119-138;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1813639	1813707	.	-	.	ID=id3066;Note=4 probable transmembrane helices predicted for YE1611 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109 and 119-138;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1813552	1813611	.	-	.	ID=id3066;Note=4 probable transmembrane helices predicted for YE1611 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109 and 119-138;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1814333	1815265	.	-	.	ID=gene1598;Name=htrB;gbkey=Gene;gene=htrB;gene_biotype=protein_coding;locus_tag=YE1612
AM286415.1	EMBL	CDS	1814333	1815265	.	-	0	ID=cds1539;Parent=gene1598;Dbxref=EnsemblGenomes-Gn:YE1612,EnsemblGenomes-Tr:CAL11687,GOA:A1JN09,InterPro:IPR004960,InterPro:IPR011920,UniProtKB/TrEMBL:A1JN09,NCBI_GP:CAL11687.1;Name=CAL11687.1;Note=Similar to many proteins involved in LPS core biosynthesis including: Escherichia coli%2C and Escherichia coli O157:H7 lipid A biosynthesis lauroyl acyltransferase HtrB or waam or b1054 or z1690 or ecs1432 SWALL:HTRB_ECOLI (SWALL:P24187) (306 aa) fasta scores: E(): 1.6e-90%2C 67.21 id in 302 aa and Haemophilus influenzae lipid a biosynthesis lauroyl acyltransferase HtrB or waam or hi1527 SWALL:HTRB_HAEIN (SWALL:P45239) (311 aa) fasta scores: E(): 1.3e-67%2C 52.86 38d in 314 aa;gbkey=CDS;gene=htrB;inference=similar to sequence:UniProtKB:P45239;product=putative lipid A biosynthesis lauroyl acyltransferase;protein_id=CAL11687.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1814366	1815247	.	-	.	ID=id3067;Note=Pfam match to entry PF03279 Lip_A_acyltrans%2CBacterial lipid A biosynthesis acyltransferase%2C score 452.5%2C E-value 2.4e-133;gbkey=misc_feature;gene=htrB;inference=protein motif:PFAM:PF03279
AM286415.1	EMBL	sequence_feature	1815140	1815208	.	-	.	ID=id3068;Note=1 probable transmembrane helix predicted for YE1612 by TMHMM2.0 at aa 20-42;gbkey=misc_feature;gene=htrB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1815509	1816012	.	-	.	ID=gene1599;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=YE1613
AM286415.1	EMBL	CDS	1815509	1816012	.	-	0	ID=cds1540;Parent=gene1599;Dbxref=EnsemblGenomes-Gn:YE1613,EnsemblGenomes-Tr:CAL11688,GOA:A1JN15,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,UniProtKB/TrEMBL:A1JN15,NCBI_GP:CAL11688.1;Name=CAL11688.1;Note=Similar to many two-component system response regulators including: Salmonella typhimurium%2C Salmonella enterica subsp. enterica serovar Typhimurium%2C and Salmonella typhi tetrathionate reductase complex response regulator TtrR or stm1387 or sty1733 SWALL:Q9Z4T0 (EMBL:AJ224978) (206 aa) fasta scores: E(): 5.7e-32%2C59.37 38d in 160 aa and to Bradyrhizobium japonicum transcriptional regulatory protein FixJ SWALL:FIXJ_BRAJA (SWALL:P23221) (205 aa) fasta scores: E(): 7.3e-18%2C 44.21 id in 147 aa. Note the regulatory partner histidine kinase is adjacent to this CDS%2C YE1614.;gbkey=CDS;gene=ttrR;inference=similar to sequence:UniProtKB:P23221;product=tetrathionate reductase complex: two-component system response regulator;protein_id=CAL11688.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1815518	1815697	.	-	.	ID=id3069;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 54.5%2C E-value 1.5e-13;gbkey=misc_feature;gene=ttrR;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	1815578	1815643	.	-	.	ID=id3070;Note=Predicted helix-turn-helix motif with score 1052.000%2C SD 2.77 at aa 124-145%2C sequence LINRDIADRACVSVRTVEVHRA;gbkey=misc_feature;gene=ttrR
AM286415.1	EMBL	sequence_feature	1815731	1816012	.	-	.	ID=id3071;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 40.4%2C E-value 2.6e-09;gbkey=misc_feature;gene=ttrR;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	1816071	1817831	.	-	.	ID=gene1600;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=YE1614
AM286415.1	EMBL	CDS	1816071	1817831	.	-	0	ID=cds1541;Parent=gene1600;Dbxref=EnsemblGenomes-Gn:YE1614,EnsemblGenomes-Tr:CAL11689,GOA:A1JN19,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB/TrEMBL:A1JN19,NCBI_GP:CAL11689.1;Name=CAL11689.1;Note=Similar to many two-component system histidine kinases e.g. Salmonella typhimurium tetrathionate reductase complex: sensory transduction histidine kinase TtrS or stm1386 SWALL:Q8ZPP6 (EMBL:AE008760) (592 aa) fasta scores: E(): 3.5e-117%2C 52.73 38d in 567 aa. Note the regulatory partner esponse regulator is adjacent to this CDS%2C YE1613.;gbkey=CDS;gene=ttrS;inference=similar to sequence:INSDC:AE008760;product=tetrathionate reductase complex: sensory transduction histidine kinase;protein_id=CAL11689.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1816113	1816436	.	-	.	ID=id3072;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 75.8%2C E-value 5.7e-20;gbkey=misc_feature;gene=ttrS;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	1816578	1816775	.	-	.	ID=id3073;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 21.8%2C E-value 0.00019;gbkey=misc_feature;gene=ttrS;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	1816863	1816931	.	-	.	ID=id3074;Note=1 probable transmembrane helix predicted for YE1614 by TMHMM2.0 at aa 301-323;gbkey=misc_feature;gene=ttrS;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1817970	1818704	.	+	.	ID=gene1601;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=YE1615
AM286415.1	EMBL	CDS	1817970	1818704	.	+	0	ID=cds1542;Parent=gene1601;Dbxref=EnsemblGenomes-Gn:YE1615,EnsemblGenomes-Tr:CAL11690,GOA:A1JN21,InterPro:IPR001450,InterPro:IPR006311,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JN21,NCBI_GP:CAL11690.1;Name=CAL11690.1;Note=Similar to Salmonella typhimurium%2C Salmonella enterica subsp. enterica serovar Typhimurium%2C and Salmonella typhi tetrathionate reductase subunit B TtrB or stm1385 or sty1736 SWALL:Q9Z4S8 (EMBL:AJ224978) (250 aa) fasta scores: E(): 2.4e-73%2C 74.59 38d in 244 aa%2C and to Pasteurella multocida tetrathionate reductase subunit B TtrB or pm0723 SWALL:Q9CMT5 (EMBL:AE006109) (245 aa) fasta scores: E(): 4.1e-66%2C 67.5 38d in 240 aa;gbkey=CDS;gene=ttrB;inference=similar to sequence:INSDC:AJ224978;product=tetrathionate reductase subunit B;protein_id=CAL11690.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1818342	1818413	.	+	.	ID=id3075;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 33.7%2C E-value 2.8e-07;gbkey=misc_feature;gene=ttrB;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	1818363	1818398	.	+	.	ID=id3076;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=ttrB;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	1818701	1819786	.	+	.	ID=gene1602;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=YE1616
AM286415.1	EMBL	CDS	1818701	1819786	.	+	0	ID=cds1543;Parent=gene1602;Dbxref=EnsemblGenomes-Gn:YE1616,EnsemblGenomes-Tr:CAL11691,InterPro:IPR005614,UniProtKB/TrEMBL:A1JN24,NCBI_GP:CAL11691.1;Name=CAL11691.1;Note=Similar to Salmonella typhimurium%2C and Salmonella enterica subsp. enterica serovar Typhimurium tetrathionate reductase subunit C TtrC or stm1384 SWALL:Q9Z4S7 (EMBL:AJ224978) (340 aa) fasta scores: E(): 9.1e-52%2C46.47 38d in 355 aa and to Pasteurella multocida TtrC or pm0722 SWALL:Q9CMT6 (EMBL:AE006109) (349 aa) fasta scores: E(): 2.5e-30%2C 39.42 38d in 350 aa;gbkey=CDS;gene=ttrC;inference=similar to sequence:INSDC:AJ224978;product=tetrathionate reductase subunit C;protein_id=CAL11691.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1818716	1819606	.	+	.	ID=id3077;Note=Pfam match to entry PF03916 NrfD%2C Polysulphide reductase%2C NrfD%2C score 24.3%2C E-value 4.4e-10;gbkey=misc_feature;gene=ttrC;inference=protein motif:PFAM:PF03916
AM286415.1	EMBL	sequence_feature	1818758	1818826	.	+	.	ID=id3078;Note=9 probable transmembrane helices predicted for YE1616 by TMHMM2.0 at aa 20-42%2C 63-80%2C 100-122%2C 135-155%2C170-192%2C 205-222%2C 242-264%2C 273-295 and 315-337;gbkey=misc_feature;gene=ttrC;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	1818887	1818940	.	+	.	ID=id3078;Note=9 probable transmembrane helices predicted for YE1616 by TMHMM2.0 at aa 20-42%2C 63-80%2C 100-122%2C 135-155%2C170-192%2C 205-222%2C 242-264%2C 273-295 and 315-337;gbkey=misc_feature;gene=ttrC;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	1818998	1819066	.	+	.	ID=id3078;Note=9 probable transmembrane helices predicted for YE1616 by TMHMM2.0 at aa 20-42%2C 63-80%2C 100-122%2C 135-155%2C170-192%2C 205-222%2C 242-264%2C 273-295 and 315-337;gbkey=misc_feature;gene=ttrC;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	1819103	1819165	.	+	.	ID=id3078;Note=9 probable transmembrane helices predicted for YE1616 by TMHMM2.0 at aa 20-42%2C 63-80%2C 100-122%2C 135-155%2C170-192%2C 205-222%2C 242-264%2C 273-295 and 315-337;gbkey=misc_feature;gene=ttrC;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	1819208	1819276	.	+	.	ID=id3078;Note=9 probable transmembrane helices predicted for YE1616 by TMHMM2.0 at aa 20-42%2C 63-80%2C 100-122%2C 135-155%2C170-192%2C 205-222%2C 242-264%2C 273-295 and 315-337;gbkey=misc_feature;gene=ttrC;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	1819313	1819366	.	+	.	ID=id3078;Note=9 probable transmembrane helices predicted for YE1616 by TMHMM2.0 at aa 20-42%2C 63-80%2C 100-122%2C 135-155%2C170-192%2C 205-222%2C 242-264%2C 273-295 and 315-337;gbkey=misc_feature;gene=ttrC;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	1819424	1819492	.	+	.	ID=id3078;Note=9 probable transmembrane helices predicted for YE1616 by TMHMM2.0 at aa 20-42%2C 63-80%2C 100-122%2C 135-155%2C170-192%2C 205-222%2C 242-264%2C 273-295 and 315-337;gbkey=misc_feature;gene=ttrC;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	1819517	1819585	.	+	.	ID=id3078;Note=9 probable transmembrane helices predicted for YE1616 by TMHMM2.0 at aa 20-42%2C 63-80%2C 100-122%2C 135-155%2C170-192%2C 205-222%2C 242-264%2C 273-295 and 315-337;gbkey=misc_feature;gene=ttrC;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	1819643	1819711	.	+	.	ID=id3078;Note=9 probable transmembrane helices predicted for YE1616 by TMHMM2.0 at aa 20-42%2C 63-80%2C 100-122%2C 135-155%2C170-192%2C 205-222%2C 242-264%2C 273-295 and 315-337;gbkey=misc_feature;gene=ttrC;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	1818770	1818802	.	+	.	ID=id3079;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ttrC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	1819211	1819243	.	+	.	ID=id3080;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ttrC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1819779	1822862	.	+	.	ID=gene1603;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=YE1617
AM286415.1	EMBL	CDS	1819779	1822862	.	+	0	ID=cds1544;Parent=gene1603;Dbxref=EnsemblGenomes-Gn:YE1617,EnsemblGenomes-Tr:CAL11692,GOA:A1JN30,InterPro:IPR006311,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,UniProtKB/TrEMBL:A1JN30,NCBI_GP:CAL11692.1;Name=CAL11692.1;Note=Similar to Salmonella typhimurium%2C and Salmonella enterica subsp. enterica serovar Typhimurium tetrathionate reductase subunit A TtrA or stm1383 SWALL:Q9Z4S6 (EMBL:AJ224978) (1020 aa) fasta scores: E(): 0%2C 65.59 38d in 1026 aa and to Pasteurella multocida TtrA or pm0721 SWALL:Q9CMT7 (EMBL:AE006109) (1029 aa) fasta scores: E(): 0%2C 55.12 38d in 1025 aa;gbkey=CDS;gene=ttrA;inference=similar to sequence:INSDC:AJ224978;product=tetrathionate reductase subunit A;protein_id=CAL11692.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1819815	1819868	.	+	.	ID=id3081;Note=1 probable transmembrane helix predicted for YE1617 by TMHMM2.0 at aa 13-30;gbkey=misc_feature;gene=ttrA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1819989	1822244	.	+	.	ID=id3082;Note=Pfam match to entry PF00384 molybdopterin%2CMolybdopterin oxidoreductase%2C score -111.9%2C E-value 5.8e-10;gbkey=misc_feature;gene=ttrA;inference=protein motif:PFAM:PF00384
AM286415.1	EMBL	sequence_feature	1822428	1822760	.	+	.	ID=id3083;Note=Pfam match to entry PF01568 Molydop_binding%2CMolydopterin dinucleotide binding domain%2C score 39.6%2CE-value 4.5e-09;gbkey=misc_feature;gene=ttrA;inference=protein motif:PFAM:PF01568
AM286415.1	EMBL	gene	1823339	1824391	.	+	.	ID=gene1604;Name=YE1619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1619
AM286415.1	EMBL	CDS	1823339	1824391	.	+	0	ID=cds1545;Parent=gene1604;Dbxref=EnsemblGenomes-Gn:YE1619,EnsemblGenomes-Tr:CAL11693,InterPro:IPR001763,InterPro:IPR020936,NCBI_GP:CAL11693.1;Name=CAL11693.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11693.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1823630	1823653	.	+	.	ID=id3084;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1823747	1824040	.	+	.	ID=id3085;Note=Pfam match to entry PF00581 Rhodanese%2CRhodanese-like domain%2C score 100.1%2C E-value 2.8e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF00581
AM286415.1	EMBL	gene	1824492	1825553	.	+	.	ID=gene1605;Name=YE1620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1620
AM286415.1	EMBL	CDS	1824492	1825553	.	+	0	ID=cds1546;Parent=gene1605;Dbxref=EnsemblGenomes-Gn:YE1620,EnsemblGenomes-Tr:CAL11694,InterPro:IPR002549,UniProtKB/TrEMBL:A1JN35,NCBI_GP:CAL11694.1;Name=CAL11694.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11694.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1824528	1825478	.	+	.	ID=id3086;Note=Pfam match to entry PF01594 UPF0118%2C Domain of unknown function DUF20%2C score 265.3%2C E-value 5.1e-77;gbkey=misc_feature;inference=protein motif:PFAM:PF01594
AM286415.1	EMBL	sequence_feature	1824528	1824632	.	+	.	ID=id3087;Note=7 probable transmembrane helices predicted for YE1620 by TMHMM2.0 at aa 13-47%2C 62-84%2C 141-163%2C 193-215%2C222-244%2C 249-271 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1824675	1824743	.	+	.	ID=id3087;Note=7 probable transmembrane helices predicted for YE1620 by TMHMM2.0 at aa 13-47%2C 62-84%2C 141-163%2C 193-215%2C222-244%2C 249-271 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1824912	1824980	.	+	.	ID=id3087;Note=7 probable transmembrane helices predicted for YE1620 by TMHMM2.0 at aa 13-47%2C 62-84%2C 141-163%2C 193-215%2C222-244%2C 249-271 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1825068	1825136	.	+	.	ID=id3087;Note=7 probable transmembrane helices predicted for YE1620 by TMHMM2.0 at aa 13-47%2C 62-84%2C 141-163%2C 193-215%2C222-244%2C 249-271 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1825155	1825223	.	+	.	ID=id3087;Note=7 probable transmembrane helices predicted for YE1620 by TMHMM2.0 at aa 13-47%2C 62-84%2C 141-163%2C 193-215%2C222-244%2C 249-271 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1825236	1825304	.	+	.	ID=id3087;Note=7 probable transmembrane helices predicted for YE1620 by TMHMM2.0 at aa 13-47%2C 62-84%2C 141-163%2C 193-215%2C222-244%2C 249-271 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1825341	1825409	.	+	.	ID=id3087;Note=7 probable transmembrane helices predicted for YE1620 by TMHMM2.0 at aa 13-47%2C 62-84%2C 141-163%2C 193-215%2C222-244%2C 249-271 and 284-306;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	1826063	1826647	.	-	.	ID=gene1606;Name=YE1621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1621
AM286415.1	EMBL	CDS	1826063	1826647	.	-	0	ID=cds1547;Parent=gene1606;Dbxref=EnsemblGenomes-Gn:YE1621,EnsemblGenomes-Tr:CAL11695,GOA:A1JN38,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JN38,NCBI_GP:CAL11695.1;Name=CAL11695.1;gbkey=CDS;product=putative LuxR-family regulatory protein;protein_id=CAL11695.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1826072	1826260	.	-	.	ID=id3088;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 27.6%2C E-value 4.5e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	1826141	1826206	.	-	.	ID=id3089;Note=Predicted helix-turn-helix motif with score 1896.000%2C SD 5.64 at aa 148-169%2C sequence MPNYRIAKKLNISDSTVYSHKR;gbkey=misc_feature
AM286415.1	EMBL	gene	1826906	1828027	.	-	.	ID=gene1607;Name=solA;gbkey=Gene;gene=solA;gene_biotype=protein_coding;gene_synonym=soxA;locus_tag=YE1622
AM286415.1	EMBL	CDS	1826906	1828027	.	-	0	ID=cds1548;Parent=gene1607;Dbxref=EnsemblGenomes-Gn:YE1622,EnsemblGenomes-Tr:CAL11696,GOA:A1JN40,InterPro:IPR006076,InterPro:IPR023493,UniProtKB/TrEMBL:A1JN40,NCBI_GP:CAL11696.1;Name=CAL11696.1;gbkey=CDS;gene=solA;product=putative sarcosine oxidase;protein_id=CAL11696.1;transl_table=11
AM286415.1	EMBL	gene	1828291	1828545	.	-	.	ID=gene1608;Name=YE1623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1623
AM286415.1	EMBL	CDS	1828291	1828545	.	-	0	ID=cds1549;Parent=gene1608;Dbxref=EnsemblGenomes-Gn:YE1623,EnsemblGenomes-Tr:CAL11697,InterPro:IPR025730,UniProtKB/TrEMBL:A1JN41,NCBI_GP:CAL11697.1;Name=CAL11697.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11697.1;transl_table=11
AM286415.1	EMBL	gene	1828908	1829153	.	-	.	ID=gene1609;Name=dinI;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=YE1624
AM286415.1	EMBL	CDS	1828908	1829153	.	-	0	ID=cds1550;Parent=gene1609;Dbxref=EnsemblGenomes-Gn:YE1624,EnsemblGenomes-Tr:CAL11698,InterPro:IPR010391,UniProtKB/TrEMBL:A1JN43,NCBI_GP:CAL11698.1;Name=CAL11698.1;gbkey=CDS;gene=dinI;product=DNA-damage-inducible protein I;protein_id=CAL11698.1;transl_table=11
AM286415.1	EMBL	gene	1829270	1830316	.	-	.	ID=gene1610;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;gene_synonym=b1062;locus_tag=YE1625
AM286415.1	EMBL	CDS	1829270	1830316	.	-	0	ID=cds1551;Parent=gene1610;Dbxref=EnsemblGenomes-Gn:YE1625,EnsemblGenomes-Tr:CAL11699,GOA:A1JN45,InterPro:IPR002195,InterPro:IPR004721,InterPro:IPR006680,NCBI_GP:CAL11699.1;Name=CAL11699.1;gbkey=CDS;gene=pyrC;product=dihydroorotase;protein_id=CAL11699.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1829537	1829572	.	-	.	ID=id3090;Note=PS00483 Dihydroorotase signature 2.;gbkey=misc_feature;gene=pyrC;inference=protein motif:Prosite:PS00483
AM286415.1	EMBL	gene	1830565	1830852	.	+	.	ID=gene1611;Name=YE1626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1626
AM286415.1	EMBL	CDS	1830565	1830852	.	+	0	ID=cds1552;Parent=gene1611;Dbxref=EnsemblGenomes-Gn:YE1626,EnsemblGenomes-Tr:CAL11700,InterPro:IPR007138,InterPro:IPR011008,UniProtKB/TrEMBL:A1JN47,NCBI_GP:CAL11700.1;Name=CAL11700.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11700.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1830571	1830849	.	+	.	ID=id3091;Note=Pfam match to entry PF02619 DUF176%2C Uncharacterized ACR%2C YneC family COG1359%2C score 73.8%2C E-value 2.3e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF02619
AM286415.1	EMBL	gene	1830922	1834452	.	-	.	ID=gene1612;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;gene_synonym=ams,hmp1;locus_tag=YE1627
AM286415.1	EMBL	CDS	1830922	1834452	.	-	0	ID=cds1553;Parent=gene1612;Dbxref=EnsemblGenomes-Gn:YE1627,EnsemblGenomes-Tr:CAL11701,GOA:A1JN49,InterPro:IPR003029,InterPro:IPR004659,InterPro:IPR012340,InterPro:IPR019307,InterPro:IPR021968,InterPro:IPR022967,InterPro:IPR028878,UniProtKB/TrEMBL:A1JN49,NCBI_GP:CAL11701.1;Name=CAL11701.1;gbkey=CDS;gene=rne;product=ribonuclease E;protein_id=CAL11701.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1834096	1834350	.	-	.	ID=id3092;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 76.2%2C E-value 4.5e-20;gbkey=misc_feature;gene=rne;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	transcript	1834478	1834817	.	-	.	ID=rna75;Note=RNase E 5' UTR element (RF00040) as predicted by Rfam%2C score 160.00%2C positions 1 to 341;gbkey=misc_RNA
AM286415.1	EMBL	exon	1834478	1834817	.	-	.	ID=id3093;Parent=rna75;Note=RNase E 5' UTR element (RF00040) as predicted by Rfam%2C score 160.00%2C positions 1 to 341;gbkey=misc_RNA
AM286415.1	EMBL	gene	1835029	1835988	.	+	.	ID=gene1613;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=YE1628
AM286415.1	EMBL	CDS	1835029	1835988	.	+	0	ID=cds1554;Parent=gene1613;Dbxref=EnsemblGenomes-Gn:YE1628,EnsemblGenomes-Tr:CAL11702,GOA:A1JN53,InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR006225,InterPro:IPR020103,UniProtKB/TrEMBL:A1JN53,NCBI_GP:CAL11702.1;Name=CAL11702.1;gbkey=CDS;gene=rluC;product=ribosomal large subunit pseudouridine synthase C;protein_id=CAL11702.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1835086	1835226	.	+	.	ID=id3094;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 44.1%2C E-value 2.1e-10;gbkey=misc_feature;gene=rluC;inference=protein motif:PFAM:PF01479
AM286415.1	EMBL	sequence_feature	1835329	1835778	.	+	.	ID=id3095;Note=Pfam match to entry PF00849 PseudoU_synth_2%2C RNA pseudouridylate synthase%2C score 182.8%2C E-value 3.7e-52;gbkey=misc_feature;gene=rluC;inference=protein motif:PFAM:PF00849
AM286415.1	EMBL	sequence_feature	1835446	1835490	.	+	.	ID=id3096;Note=PS01129 Rlu family of pseudouridine synthase signature.;gbkey=misc_feature;gene=rluC;inference=protein motif:Prosite:PS01129
AM286415.1	EMBL	gene	1836039	1836620	.	-	.	ID=gene1614;Name=YE1629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1629
AM286415.1	EMBL	CDS	1836039	1836620	.	-	0	ID=cds1555;Parent=gene1614;Dbxref=EnsemblGenomes-Gn:YE1629,EnsemblGenomes-Tr:CAL11703,GOA:A1JN57,InterPro:IPR003697,InterPro:IPR029001,UniProtKB/TrEMBL:A1JN57,NCBI_GP:CAL11703.1;Name=CAL11703.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11703.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1836042	1836617	.	-	.	ID=id3097;Note=Pfam match to entry PF02545 Maf%2C Maf-like protein %2Cscore 210.9%2C E-value 1.2e-60;gbkey=misc_feature;inference=protein motif:PFAM:PF02545
AM286415.1	EMBL	gene	1836762	1837292	.	+	.	ID=gene1615;Name=YE1630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1630
AM286415.1	EMBL	CDS	1836762	1837292	.	+	0	ID=cds1556;Parent=gene1615;Dbxref=EnsemblGenomes-Gn:YE1630,EnsemblGenomes-Tr:CAL11704,InterPro:IPR003772,UniProtKB/TrEMBL:A1JN59,NCBI_GP:CAL11704.1;Name=CAL11704.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11704.1;transl_table=11
AM286415.1	EMBL	gene	1837298	1837465	.	+	.	ID=gene1616;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=YE1631
AM286415.1	EMBL	CDS	1837298	1837465	.	+	0	ID=cds1557;Parent=gene1616;Dbxref=EnsemblGenomes-Gn:YE1631,EnsemblGenomes-Tr:CAL11705,GOA:A1JN60,InterPro:IPR002677,InterPro:IPR011332,NCBI_GP:CAL11705.1;Name=CAL11705.1;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=CAL11705.1;transl_table=11
AM286415.1	EMBL	gene	1837502	1838536	.	+	.	ID=gene1617;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=YE1632
AM286415.1	EMBL	CDS	1837502	1838536	.	+	0	ID=cds1558;Parent=gene1617;Dbxref=EnsemblGenomes-Gn:YE1632,EnsemblGenomes-Tr:CAL11706,GOA:A1JN63,InterPro:IPR003664,InterPro:IPR012281,InterPro:IPR024084,NCBI_GP:CAL11706.1;Name=CAL11706.1;gbkey=CDS;gene=plsX;product=fatty acid/phospholipid synthesis protein;protein_id=CAL11706.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1837511	1838494	.	+	.	ID=id3098;Note=Pfam match to entry PF02504 FA_synthesis%2C Fatty acid synthesis protein%2C score 533.3%2C E-value 1.1e-157;gbkey=misc_feature;gene=plsX;inference=protein motif:PFAM:PF02504
AM286415.1	EMBL	gene	1838543	1839508	.	+	.	ID=gene1618;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=YE1633
AM286415.1	EMBL	CDS	1838543	1839508	.	+	0	ID=cds1559;Parent=gene1618;Dbxref=EnsemblGenomes-Gn:YE1633,EnsemblGenomes-Tr:CAL11707,GOA:A1JN67,InterPro:IPR004655,InterPro:IPR013747,InterPro:IPR013751,InterPro:IPR016038,InterPro:IPR016039,NCBI_GP:CAL11707.1;Name=CAL11707.1;gbkey=CDS;gene=fabH;product=3-oxoacyl-[acyl-carrier-protein] synthase III;protein_id=CAL11707.1;transl_table=11
AM286415.1	EMBL	gene	1839562	1840491	.	+	.	ID=gene1619;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;gene_synonym=tfpA;locus_tag=YE1634
AM286415.1	EMBL	CDS	1839562	1840491	.	+	0	ID=cds1560;Parent=gene1619;Dbxref=EnsemblGenomes-Gn:YE1634,EnsemblGenomes-Tr:CAL11708,GOA:A1JN69,InterPro:IPR001227,InterPro:IPR004410,InterPro:IPR014043,InterPro:IPR016035,InterPro:IPR016036,InterPro:IPR024925,UniProtKB/TrEMBL:A1JN69,NCBI_GP:CAL11708.1;Name=CAL11708.1;gbkey=CDS;gene=fabD;product=malonyl CoA-acyl carrier protein transacylase;protein_id=CAL11708.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1839571	1840488	.	+	.	ID=id3099;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 367.0%2C E-value 1.3e-107;gbkey=misc_feature;gene=fabD;inference=protein motif:PFAM:PF00698
AM286415.1	EMBL	gene	1840505	1841239	.	+	.	ID=gene1620;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=YE1635
AM286415.1	EMBL	CDS	1840505	1841239	.	+	0	ID=cds1561;Parent=gene1620;Dbxref=EnsemblGenomes-Gn:YE1635,EnsemblGenomes-Tr:CAL11709,GOA:A1JN73,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR011284,InterPro:IPR016040,InterPro:IPR020904,UniProtKB/TrEMBL:A1JN73,NCBI_GP:CAL11709.1;Name=CAL11709.1;gbkey=CDS;gene=fabG;product=3-oxoacyl-[acyl-carrier protein] reductase;protein_id=CAL11709.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1840514	1841227	.	+	.	ID=id3100;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 326.4%2C E-value 2.2e-95;gbkey=misc_feature;gene=fabG;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	sequence_feature	1840916	1841002	.	+	.	ID=id3101;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=fabG;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	gene	1841393	1841629	.	+	.	ID=gene1621;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=YE1636
AM286415.1	EMBL	CDS	1841393	1841629	.	+	0	ID=cds1562;Parent=gene1621;Dbxref=EnsemblGenomes-Gn:YE1636,EnsemblGenomes-Tr:CAL11710,GOA:A1JN78,InterPro:IPR003231,InterPro:IPR006162,InterPro:IPR009081,UniProtKB/TrEMBL:A1JN78,NCBI_GP:CAL11710.1;Name=CAL11710.1;gbkey=CDS;gene=acpP;product=acyl carrier protein;protein_id=CAL11710.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1841408	1841611	.	+	.	ID=id3102;Note=Pfam match to entry PF00550 pp-binding%2CPhosphopantetheine attachment site%2C score 82.1%2C E-value 7.5e-22;gbkey=misc_feature;gene=acpP;inference=protein motif:PFAM:PF00550
AM286415.1	EMBL	sequence_feature	1841486	1841533	.	+	.	ID=id3103;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=acpP;inference=protein motif:Prosite:PS00012
AM286415.1	EMBL	gene	1841724	1842962	.	+	.	ID=gene1622;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;gene_synonym=fabJ;locus_tag=YE1637
AM286415.1	EMBL	CDS	1841724	1842962	.	+	0	ID=cds1563;Parent=gene1622;Dbxref=EnsemblGenomes-Gn:YE1637,EnsemblGenomes-Tr:CAL11711,GOA:A1JN80,InterPro:IPR014030,InterPro:IPR014031,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR017568,InterPro:IPR018201,UniProtKB/TrEMBL:A1JN80,NCBI_GP:CAL11711.1;Name=CAL11711.1;gbkey=CDS;gene=fabF;product=3-oxoacyl-[acyl-carrier-protein] synthase II;protein_id=CAL11711.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1841730	1842464	.	+	.	ID=id3104;Note=Pfam match to entry PF00109 ketoacyl-synt%2CBeta-ketoacyl synthase%2C N-terminal domain%2C score 283.8%2CE-value 1.4e-82;gbkey=misc_feature;gene=fabF;inference=protein motif:PFAM:PF00109
AM286415.1	EMBL	sequence_feature	1842186	1842236	.	+	.	ID=id3105;Note=PS00606 Beta-ketoacyl synthases active site.;gbkey=misc_feature;gene=fabF;inference=protein motif:Prosite:PS00606
AM286415.1	EMBL	sequence_feature	1842486	1842956	.	+	.	ID=id3106;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2CBeta-ketoacyl synthase%2C C-terminal domain%2C score 250.1%2CE-value 2e-72;gbkey=misc_feature;gene=fabF;inference=protein motif:PFAM:PF02801
AM286415.1	EMBL	gene	1843200	1844024	.	+	.	ID=gene1623;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=YE1638
AM286415.1	EMBL	CDS	1843200	1844024	.	+	0	ID=cds1564;Parent=gene1623;Dbxref=EnsemblGenomes-Gn:YE1638,EnsemblGenomes-Tr:CAL11712,GOA:A1JN85,InterPro:IPR001544,InterPro:IPR017824,InterPro:IPR018300,UniProtKB/TrEMBL:A1JN85,NCBI_GP:CAL11712.1;Name=CAL11712.1;gbkey=CDS;gene=pabC;product=4-amino-4-deoxychorismate lyase;protein_id=CAL11712.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1843200	1844003	.	+	.	ID=id3107;Note=Pfam match to entry PF01063 aminotran_4%2CAminotransferase class IV%2C score 110.1%2C E-value 2.8e-30;gbkey=misc_feature;gene=pabC;inference=protein motif:PFAM:PF01063
AM286415.1	EMBL	sequence_feature	1843716	1843805	.	+	.	ID=id3108;Note=PS00770 Aminotransferases class-IV signature.;gbkey=misc_feature;gene=pabC;inference=protein motif:Prosite:PS00770
AM286415.1	EMBL	gene	1844086	1845111	.	+	.	ID=gene1624;Name=yceG;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=YE1639
AM286415.1	EMBL	CDS	1844086	1845111	.	+	0	ID=cds1565;Parent=gene1624;Dbxref=EnsemblGenomes-Gn:YE1639,EnsemblGenomes-Tr:CAL11713,GOA:A1JN87,InterPro:IPR003770,InterPro:IPR013087,UniProtKB/TrEMBL:A1JN87,NCBI_GP:CAL11713.1;Name=CAL11713.1;gbkey=CDS;gene=yceG;product=putative exported protein;protein_id=CAL11713.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1844086	1845087	.	+	.	ID=id3109;Note=Pfam match to entry PF02618 DUF175%2C Uncharacterized BCR%2C YceG family COG1559%2C score 485.4%2C E-value 3e-143;gbkey=misc_feature;gene=yceG;inference=protein motif:PFAM:PF02618
AM286415.1	EMBL	sequence_feature	1844104	1844157	.	+	.	ID=id3110;Note=1 probable transmembrane helix predicted for YE1639 by TMHMM2.0 at aa 7-24;gbkey=misc_feature;gene=yceG;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1845101	1845739	.	+	.	ID=gene1625;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=YE1640
AM286415.1	EMBL	CDS	1845101	1845739	.	+	0	ID=cds1566;Parent=gene1625;Dbxref=EnsemblGenomes-Gn:YE1640,EnsemblGenomes-Tr:CAL11714,GOA:A1JN89,InterPro:IPR018094,InterPro:IPR018095,InterPro:IPR027417,NCBI_GP:CAL11714.1;Name=CAL11714.1;gbkey=CDS;gene=tmk;product=thymidylate kinase;protein_id=CAL11714.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1845122	1845694	.	+	.	ID=id3111;Note=Pfam match to entry PF02223 Thymidylate_kin%2CThymidylate kinase%2C score 293.4%2C E-value 1.9e-85;gbkey=misc_feature;gene=tmk;inference=protein motif:PFAM:PF02223
AM286415.1	EMBL	sequence_feature	1845128	1845151	.	+	.	ID=id3112;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=tmk;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1845383	1845421	.	+	.	ID=id3113;Note=PS01331 Thymidylate kinase signature.;gbkey=misc_feature;gene=tmk;inference=protein motif:Prosite:PS01331
AM286415.1	EMBL	gene	1845739	1846746	.	+	.	ID=gene1626;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=YE1641
AM286415.1	EMBL	CDS	1845739	1846746	.	+	0	ID=cds1567;Parent=gene1626;Dbxref=EnsemblGenomes-Gn:YE1641,EnsemblGenomes-Tr:CAL11715,GOA:A1JN92,InterPro:IPR004622,InterPro:IPR008921,InterPro:IPR015199,InterPro:IPR027417,UniProtKB/TrEMBL:A1JN92,NCBI_GP:CAL11715.1;Name=CAL11715.1;gbkey=CDS;gene=holB;product=DNA polymerase III%2C delta' subunit;protein_id=CAL11715.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1845913	1845930	.	+	.	ID=id3114;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=holB;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	1846761	1847570	.	+	.	ID=gene1627;Name=YE1642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1642
AM286415.1	EMBL	CDS	1846761	1847570	.	+	0	ID=cds1568;Parent=gene1627;Dbxref=EnsemblGenomes-Gn:YE1642,EnsemblGenomes-Tr:CAL11716,GOA:A1JN97,InterPro:IPR001130,InterPro:IPR015991,InterPro:IPR018228,UniProtKB/TrEMBL:A1JN97,NCBI_GP:CAL11716.1;Name=CAL11716.1;gbkey=CDS;product=putative deoxyribonuclease;protein_id=CAL11716.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1846767	1846793	.	+	.	ID=id3115;Note=PS01137 Uncharacterized protein family UPF0006 signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS01137
AM286415.1	EMBL	sequence_feature	1846782	1847525	.	+	.	ID=id3116;Note=Pfam match to entry PF01026 TatD_DNase%2C TatD related DNase%2C score 387.7%2C E-value 7.4e-114;gbkey=misc_feature;inference=protein motif:PFAM:PF01026
AM286415.1	EMBL	sequence_feature	1847136	1847168	.	+	.	ID=id3117;Note=PS01090 Uncharacterized protein family UPF0006 signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01090
AM286415.1	EMBL	sequence_feature	1847331	1847381	.	+	.	ID=id3118;Note=PS01091 Uncharacterized protein family UPF0006 signature 3.;gbkey=misc_feature;inference=protein motif:Prosite:PS01091
AM286415.1	EMBL	gene	1847878	1849311	.	+	.	ID=gene1628;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;gene_synonym=glcA,umG;locus_tag=YE1643
AM286415.1	EMBL	CDS	1847878	1849311	.	+	0	ID=cds1569;Parent=gene1628;Dbxref=EnsemblGenomes-Gn:YE1643,EnsemblGenomes-Tr:CAL11717,GOA:A1JN99,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR004719,InterPro:IPR011299,InterPro:IPR013013,InterPro:IPR018113,UniProtKB/TrEMBL:A1JN99,NCBI_GP:CAL11717.1;Name=CAL11717.1;gbkey=CDS;gene=ptsG;product=PTS system%2C glucose-specific IIBC component;protein_id=CAL11717.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1847914	1848837	.	+	.	ID=id3119;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 459.2%2C E-value 2.2e-135;gbkey=misc_feature;gene=ptsG;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	sequence_feature	1847920	1847988	.	+	.	ID=id3120;Note=9 probable transmembrane helices predicted for YE1643 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 116-138%2C153-175%2C 250-272%2C 282-304%2C 309-331 and 354-376;gbkey=misc_feature;gene=ptsG;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	1848022	1848090	.	+	.	ID=id3120;Note=9 probable transmembrane helices predicted for YE1643 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 116-138%2C153-175%2C 250-272%2C 282-304%2C 309-331 and 354-376;gbkey=misc_feature;gene=ptsG;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	1848118	1848186	.	+	.	ID=id3120;Note=9 probable transmembrane helices predicted for YE1643 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 116-138%2C153-175%2C 250-272%2C 282-304%2C 309-331 and 354-376;gbkey=misc_feature;gene=ptsG;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	1848223	1848291	.	+	.	ID=id3120;Note=9 probable transmembrane helices predicted for YE1643 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 116-138%2C153-175%2C 250-272%2C 282-304%2C 309-331 and 354-376;gbkey=misc_feature;gene=ptsG;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	1848334	1848402	.	+	.	ID=id3120;Note=9 probable transmembrane helices predicted for YE1643 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 116-138%2C153-175%2C 250-272%2C 282-304%2C 309-331 and 354-376;gbkey=misc_feature;gene=ptsG;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	1848625	1848693	.	+	.	ID=id3120;Note=9 probable transmembrane helices predicted for YE1643 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 116-138%2C153-175%2C 250-272%2C 282-304%2C 309-331 and 354-376;gbkey=misc_feature;gene=ptsG;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	1848721	1848789	.	+	.	ID=id3120;Note=9 probable transmembrane helices predicted for YE1643 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 116-138%2C153-175%2C 250-272%2C 282-304%2C 309-331 and 354-376;gbkey=misc_feature;gene=ptsG;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	1848802	1848870	.	+	.	ID=id3120;Note=9 probable transmembrane helices predicted for YE1643 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 116-138%2C153-175%2C 250-272%2C 282-304%2C 309-331 and 354-376;gbkey=misc_feature;gene=ptsG;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	1848937	1849005	.	+	.	ID=id3120;Note=9 probable transmembrane helices predicted for YE1643 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 116-138%2C153-175%2C 250-272%2C 282-304%2C 309-331 and 354-376;gbkey=misc_feature;gene=ptsG;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	1849081	1849185	.	+	.	ID=id3121;Note=Pfam match to entry PF00367 PTS_EIIB%2Cphosphotransferase system%2C EIIB%2C score 68.8%2C E-value 7.4e-18;gbkey=misc_feature;gene=ptsG;inference=protein motif:PFAM:PF00367
AM286415.1	EMBL	sequence_feature	1849117	1849170	.	+	.	ID=id3122;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;gene=ptsG;inference=protein motif:Prosite:PS01035
AM286415.1	EMBL	repeat_region	1849344	1849357	.	+	.	ID=id3123;Note=Direct repeat flanking prophage%2C 14mer;gbkey=repeat_region
AM286415.1	EMBL	sequence_feature	1849358	1888447	.	+	.	ID=id3124;gbkey=misc_feature;standard_name=YE185%3B P2-family prophage
AM286415.1	EMBL	gene	1849385	1849729	.	-	.	ID=gene1629;Name=ogr;gbkey=Gene;gene=ogr;gene_biotype=protein_coding;locus_tag=YE1643A
AM286415.1	EMBL	CDS	1849385	1849729	.	-	0	ID=cds1570;Parent=gene1629;Dbxref=EnsemblGenomes-Gn:YE1643A,EnsemblGenomes-Tr:CAL11718,InterPro:IPR007684,UniProtKB/TrEMBL:A1JNA6,NCBI_GP:CAL11718.1;Name=CAL11718.1;gbkey=CDS;gene=ogr;product=phage late control protein;protein_id=CAL11718.1;transl_table=11
AM286415.1	EMBL	gene	1849792	1850901	.	-	.	ID=gene1630;Name=gpD;gbkey=Gene;gene=gpD;gene_biotype=protein_coding;locus_tag=YE1644
AM286415.1	EMBL	CDS	1849792	1850901	.	-	0	ID=cds1571;Parent=gene1630;Dbxref=EnsemblGenomes-Gn:YE1644,EnsemblGenomes-Tr:CAL11719,UniProtKB/TrEMBL:A1JNA9,NCBI_GP:CAL11719.1;Name=CAL11719.1;Note=Similar to Bacteriophage P2 regulator of late gene expression%2C protein D SWALL:VPD_BPP2 (SWALL:P10312) (387 aa) fasta scores: E(): 3.4e-45%2C 47.98 38d in 373 aa%2C and to Salmonella typhi putative regulator of late gene expression Sty3702 or sty2882 SWALL:Q8XG84 (EMBL:AL627279) (366 aa) fasta scores: E(): 3.9e-71%2C 55.21 38d in 355 aa;gbkey=CDS;gene=gpD;inference=similar to sequence:UniProtKB:P10312;product=regulator of late gene expression;protein_id=CAL11719.1;transl_table=11
AM286415.1	EMBL	gene	1851043	1852221	.	+	.	ID=gene1631;Name=fI;gbkey=Gene;gene=fI;gene_biotype=protein_coding;locus_tag=YE1645
AM286415.1	EMBL	CDS	1851043	1852221	.	+	0	ID=cds1572;Parent=gene1631;Dbxref=EnsemblGenomes-Gn:YE1645,EnsemblGenomes-Tr:CAL11720,InterPro:IPR007067,UniProtKB/TrEMBL:A1JNB0,NCBI_GP:CAL11720.1;Name=CAL11720.1;Note=Similar to Bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 9e-86%2C 54.82 38d in 394 aa%2C and to Bacteriophage 186 similar tail sheath protein FI J SWALL:Q37844 (EMBL:U32222) (392 aa) fasta scores: E(): 9.8e-85%2C 53.7 38d in 391 aa;gbkey=CDS;gene=fI;inference=similar to sequence:UniProtKB:P22501;product=major tail sheath protein;protein_id=CAL11720.1;transl_table=11
AM286415.1	EMBL	gene	1852233	1852748	.	+	.	ID=gene1632;Name=fII;gbkey=Gene;gene=fII;gene_biotype=protein_coding;locus_tag=YE1646
AM286415.1	EMBL	CDS	1852233	1852748	.	+	0	ID=cds1573;Parent=gene1632;Dbxref=EnsemblGenomes-Gn:YE1646,EnsemblGenomes-Tr:CAL11721,InterPro:IPR006498,UniProtKB/TrEMBL:A1JNB2,NCBI_GP:CAL11721.1;Name=CAL11721.1;Note=Similar to Bacteriophage P2 major tail tube protein FII SWALL:VPF2_BPP2 (SWALL:P22502) (171 aa) fasta scores: E(): 1.6e-29%2C 51.46 38d in 171 aa%2C and to Bacteriophage 186 similar to p2 tail tube protein FII I SWALL:Q37845 (EMBL:U32222) (173 aa) fasta scores: E(): 1.7e-28%2C 49.42 id in 174 aa;gbkey=CDS;gene=fII;inference=similar to sequence:UniProtKB:P22502;product=major tail tube protein;protein_id=CAL11721.1;transl_table=11
AM286415.1	EMBL	gene	1852764	1853087	.	+	.	ID=gene1633;Name=gpE;gbkey=Gene;gene=gpE;gene_biotype=protein_coding;locus_tag=YE1647
AM286415.1	EMBL	CDS	1852764	1853087	.	+	0	ID=cds1574;Parent=gene1633;Dbxref=EnsemblGenomes-Gn:YE1647,EnsemblGenomes-Tr:CAL11722,InterPro:IPR019289,UniProtKB/TrEMBL:A1JNB4,NCBI_GP:CAL11722.1;Name=CAL11722.1;Note=Similar to Bacteriophage P2 phage tail protein gpE SWALL:O64313 (EMBL:AF063097) (91 aa) fasta scores: E(): 6.4e-10%2C 43.67 38d in 87 aa and to Salmonella typhi putative phage tail protein Sty3698 or sty2886 SWALL:Q8XFW3 (EMBL:AL627279) (100 aa) fasta scores: E(): 7e-10%2C 47.67 38d in 86 aa;gbkey=CDS;gene=gpE;inference=similar to sequence:INSDC:AL627279;product=putative phage tail protein;protein_id=CAL11722.1;transl_table=11
AM286415.1	EMBL	pseudogene	1853219	1856430	.	+	.	ID=gene1634;Name=gpT;gbkey=Gene;gene=gpT;gene_biotype=pseudogene;locus_tag=YE1648;pseudo=true
AM286415.1	EMBL	CDS	1853219	1855000	.	+	0	ID=cds1575;Parent=gene1634;Dbxref=PSEUDO:CAL11724.1;Note=Similar to many phage proteins including: Bacteriophage P2 gpT SWALL:O64314 (EMBL:AF063097) (815 aa) fasta scores: E(): 1.2e-13%2C 22.39 38d in 853 aa%2CSalmonella typhi hypothetical protein Sty3700 or SWALL:Q8XFL4 (EMBL:AL627279) (1025 aa) fasta scores: E(): 1.1e-94%2C 46.88 38d in 900 aa and to Salmonella typhimurium fels-2 prophage:similar to orfG protein in phage 186 Stm2697 SWALL:Q8ZMV3 (EMBL:AE008823) (935 aa) fasta scores: E(): 1.6e-88%2C 42.18 38d in 998 aa. this CDS carries a single frameshift mutation;gbkey=CDS;gene=gpT;inference=similar to sequence:INSDC:AL627279;product=bacteriophage tail fibre protein;pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1855000	1856430	.	+	0	ID=cds1575;Parent=gene1634;Dbxref=PSEUDO:CAL11724.1;Note=Similar to many phage proteins including: Bacteriophage P2 gpT SWALL:O64314 (EMBL:AF063097) (815 aa) fasta scores: E(): 1.2e-13%2C 22.39 38d in 853 aa%2CSalmonella typhi hypothetical protein Sty3700 or SWALL:Q8XFL4 (EMBL:AL627279) (1025 aa) fasta scores: E(): 1.1e-94%2C 46.88 38d in 900 aa and to Salmonella typhimurium fels-2 prophage:similar to orfG protein in phage 186 Stm2697 SWALL:Q8ZMV3 (EMBL:AE008823) (935 aa) fasta scores: E(): 1.6e-88%2C 42.18 38d in 998 aa. this CDS carries a single frameshift mutation;gbkey=CDS;gene=gpT;inference=similar to sequence:INSDC:AL627279;product=bacteriophage tail fibre protein;pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1854848	1854916	.	+	.	ID=id3125;Note=1 probable transmembrane helix predicted for YE1648 by TMHMM2.0 at aa 544-566;gbkey=misc_feature;gene=gpT;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1855261	1855329	.	+	.	ID=id3126;Note=2 probable transmembrane helices predicted for YE1649 by TMHMM2.0 at aa 80-102 and 104-123;gbkey=misc_feature;gene=gpT;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1855333	1855392	.	+	.	ID=id3126;Note=2 probable transmembrane helices predicted for YE1649 by TMHMM2.0 at aa 80-102 and 104-123;gbkey=misc_feature;gene=gpT;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	signal_peptide	1855024	1855101	.	+	.	ID=id3127;Note=Signal peptide predicted for YE1649 by SignalP 2.0 HMM (Signal peptide probabilty 0.951) with cleavage site probability 0.333 between residues 26 and 27;gbkey=sig_peptide;gene=gpT;pseudo=true
AM286415.1	EMBL	pseudogene	1855024	1855101	.	+	.	ID=gene1635;Name=gpT;gbkey=Gene;gene=gpT;gene_biotype=pseudogene;locus_tag=YE1649;pseudo=true
AM286415.1	EMBL	gene	1856433	1856843	.	+	.	ID=gene1636;Name=gpU;gbkey=Gene;gene=gpU;gene_biotype=protein_coding;locus_tag=YE1650
AM286415.1	EMBL	CDS	1856433	1856843	.	+	0	ID=cds1576;Parent=gene1636;Dbxref=EnsemblGenomes-Gn:YE1650,EnsemblGenomes-Tr:CAL11725,InterPro:IPR009734,InterPro:IPR016912,UniProtKB/TrEMBL:A1JNC4,NCBI_GP:CAL11725.1;Name=CAL11725.1;Note=Similar to many including: Salmonella typhi putative phage tail protein Sty3701 SWALL:Q8XF01 (EMBL:AL627279) (161 aa) fasta scores: E(): 2.1e-27%2C56.71 38d in 134 aa%2C Bacteriophage P2 gpU SWALL:O64315 (EMBL:AF063097) (159 aa) fasta scores: E(): 1.3e-23%2C 50 id in 134 aa and to bacteriophage phi CTX orf26 SWALL:Q9ZXJ9 (EMBL:AB008550) (146 aa) fasta scores: E(): 4.4e-22%2C 47.76 38d in 134 aa;gbkey=CDS;gene=gpU;inference=similar to sequence:INSDC:AL627279;product=putative phage tail protein;protein_id=CAL11725.1;transl_table=11
AM286415.1	EMBL	gene	1856945	1857232	.	+	.	ID=gene1637;Name=YE1651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1651
AM286415.1	EMBL	CDS	1856945	1857232	.	+	0	ID=cds1577;Parent=gene1637;Dbxref=EnsemblGenomes-Gn:YE1651,EnsemblGenomes-Tr:CAL11726,UniProtKB/TrEMBL:A1JNC8,NCBI_GP:CAL11726.1;Name=CAL11726.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11726.1;transl_table=11
AM286415.1	EMBL	gene	1857369	1857551	.	-	.	ID=gene1638;Name=YE1652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1652
AM286415.1	EMBL	CDS	1857369	1857551	.	-	0	ID=cds1578;Parent=gene1638;Dbxref=EnsemblGenomes-Gn:YE1652,EnsemblGenomes-Tr:CAL11727,UniProtKB/TrEMBL:A1JNC9,NCBI_GP:CAL11727.1;Name=CAL11727.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11727.1;transl_table=11
AM286415.1	EMBL	gene	1857643	1857891	.	-	.	ID=gene1639;Name=YE1653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1653
AM286415.1	EMBL	CDS	1857643	1857891	.	-	0	ID=cds1579;Parent=gene1639;Dbxref=EnsemblGenomes-Gn:YE1653,EnsemblGenomes-Tr:CAL11728,UniProtKB/TrEMBL:A1JND0,NCBI_GP:CAL11728.1;Name=CAL11728.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11728.1;transl_table=11
AM286415.1	EMBL	gene	1857891	1858259	.	+	.	ID=gene1640;Name=YE1654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1654
AM286415.1	EMBL	CDS	1857891	1858259	.	+	0	ID=cds1580;Parent=gene1640;Dbxref=EnsemblGenomes-Gn:YE1654,EnsemblGenomes-Tr:CAL11729,UniProtKB/TrEMBL:A1JND1,NCBI_GP:CAL11729.1;Name=CAL11729.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11729.1;transl_table=11
AM286415.1	EMBL	repeat_region	1858235	1859403	.	-	.	ID=id3128;gbkey=repeat_region
AM286415.1	EMBL	gene	1858406	1859353	.	-	.	ID=gene1641;Name=YE1655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1655
AM286415.1	EMBL	CDS	1858406	1859353	.	-	0	ID=cds1581;Parent=gene1641;Dbxref=EnsemblGenomes-Gn:YE1655,EnsemblGenomes-Tr:CAL11730,InterPro:IPR006842,InterPro:IPR010106,UniProtKB/TrEMBL:A1JND2,NCBI_GP:CAL11730.1;Name=CAL11730.1;Note=Similar to many proteins%2C of undefined function%2Cthat are thought to represent a novel family of transposases%2C including: Escherichia coli hypothetical protein YhgA or b3411 SWALL:YHGA_ECOLI (SWALL:P31667) (292 aa) fasta scores: E(): 4.7e-57%2C 54.54 38d in 297 aa%2CYersinia pestis hypothetical protein Ypo0076 SWALL:Q8ZJL8 (EMBL:AJ414141) (319 aa) fasta scores: E(): 6.4e-106%2C85.58 38d in 319 aa%2C Salmonella typhimurium putative transposase Stm0479 SWALL:Q8ZRA4 (EMBL:AE008718) (311 aa) fasta scores: E(): 2.9e-61%2C 51.76 38d in 311 aa and Escherichia coli hypothetical protein YadD or b0132 SWALL:YADD_ECOLI (SWALL:P31665) (300 aa) fasta scores: E(): 6.3e-54%2C 51.17 38d in 297 aa. Additional copies of this element are represented by YE1924%2C YE1921 and YE3497. There are also two partial sequences represented by YE1656 and YE1925.;gbkey=CDS;inference=similar to sequence:UniProtKB:P31667;product=putative transposase;protein_id=CAL11730.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1858475	1859311	.	-	.	ID=id3129;Note=Pfam match to entry PF04754 putative transposase%2CYhgA-like%2C E-value 6.6e-178;gbkey=misc_feature;inference=protein motif:PFAM:PF04754
AM286415.1	EMBL	pseudogene	1859520	1859696	.	-	.	ID=gene1642;Name=YE1656;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1656;pseudo=true
AM286415.1	EMBL	CDS	1859520	1859696	.	-	0	ID=cds1582;Parent=gene1642;Dbxref=PSEUDO:CAL11731.1;Note=This CDS appears to be a gene remnant. Similar to the very C-termini of many proteins%2C of undefined function%2C that are thought to represent a novel family of transposases%2C including: Yersinia pestis hypothetical protein Ypo0076 SWALL:Q8ZJL8 (EMBL:AJ414141) (319 aa) fasta scores: E(): 8e-06%2C 50 38d in 62 aa%2C Yersinia pestis putative transposase Y1072 or Ypmt1.71 SWALL:O68786 (EMBL:AF074611) (328 aa) fasta scores: E(): 0.023%2C 40.9 id in 66 aa%2C Escherichia coli hypothetical protein YfaD or b2244 SWALL:YFAD_ECOLI (SWALL:P37014) (299 aa) fasta scores: E(): 0.099%2C 41.07 38d in 56 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37014;product=putative transposase (remnant);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	1860141	1860461	.	-	.	ID=gene1643;Name=YE1657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1657
AM286415.1	EMBL	CDS	1860141	1860461	.	-	0	ID=cds1583;Parent=gene1643;Dbxref=EnsemblGenomes-Gn:YE1657,EnsemblGenomes-Tr:CAL11732,UniProtKB/TrEMBL:A1JND4,NCBI_GP:CAL11732.1;Name=CAL11732.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11732.1;transl_table=11
AM286415.1	EMBL	gene	1860804	1861208	.	-	.	ID=gene1644;Name=YE1658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1658
AM286415.1	EMBL	CDS	1860804	1861208	.	-	0	ID=cds1584;Parent=gene1644;Dbxref=EnsemblGenomes-Gn:YE1658,EnsemblGenomes-Tr:CAL11733,GOA:A1JND5,InterPro:IPR002716,InterPro:IPR022907,InterPro:IPR029060,UniProtKB/TrEMBL:A1JND5,NCBI_GP:CAL11733.1;Name=CAL11733.1;Note=Similar to Bacteroides nodosus virulence-associated protein C VapC SWALL:Q46557 (EMBL:L31763) (135 aa) fasta scores: E(): 4e-19%2C 47.32 38d in 131 aa%2C and to Haemophilus influenzae hypothetical protein Hi0947 hi0947 SWALL:Y947_HAEIN (SWALL:P71363) (132 aa) fasta scores: E(): 1.1e-32%2C 65.15 38d in 132 aa%2C and to Rhizobium meliloti NtrR protein ntrR or ntrR1 or r02418 or smc01521 SWALL:Q9L380 (EMBL:AJ277847) (134 aa) fasta scores: E(): 7.1e-12%2C 42.1 38d in 133 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P71363;product=conserved hypothetical phage protein;protein_id=CAL11733.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1860816	1861196	.	-	.	ID=id3130;Note=Pfam match to entry PF01850 PIN%2C PIN domain%2C score 88.1%2C E-value 1.2e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF01850
AM286415.1	EMBL	gene	1861208	1861441	.	-	.	ID=gene1645;Name=YE1659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1659
AM286415.1	EMBL	CDS	1861208	1861441	.	-	0	ID=cds1585;Parent=gene1645;Dbxref=EnsemblGenomes-Gn:YE1659,EnsemblGenomes-Tr:CAL11734,InterPro:IPR007159,UniProtKB/TrEMBL:A1JND7,NCBI_GP:CAL11734.1;Name=CAL11734.1;Note=Similar to many proteins of unknown function including: Haemophilus influenzae hypothetical protein Hi0948 SWALL:Y948_HAEIN (SWALL:Q57120) (77 aa) fasta scores: E(): 1e-13%2C 50.66 38d in 75 aa and Rhizobium meliloti hypothetical protein R02686 or smc00686 SWALL:Q92MD9 (EMBL:AL591791) (77 aa) fasta scores: E(): 6.3e-11%2C 42.85 38d in 77 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q57120;product=hypothetical phage protein;protein_id=CAL11734.1;transl_table=11
AM286415.1	EMBL	gene	1861923	1862537	.	-	.	ID=gene1646;Name=YE1661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1661
AM286415.1	EMBL	CDS	1861923	1862537	.	-	0	ID=cds1586;Parent=gene1646;Dbxref=EnsemblGenomes-Gn:YE1661,EnsemblGenomes-Tr:CAL11735,InterPro:IPR003458,UniProtKB/TrEMBL:A1JND9,NCBI_GP:CAL11735.1;Name=CAL11735.1;Note=Similar to Escherichia coli tail fiber assembly protein homolog from lambdoid prophage E14 TfaE or b1156 SWALL:TFAE_ECOLI (SWALL:P09153) (200 aa) fasta scores: E(): 1.3e-20%2C 36 38d in 200 aa and to Yersinia pestis lambda tail fiber assembly protein G Y1053 or Ypmt1.03C SWALL:O68721 (EMBL:AF074611) (202 aa) fasta scores: E(): 9.5e-21%2C 38.74 38d in 191 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P09153;product=putative phage tail fiber assembly protein;protein_id=CAL11735.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1861926	1862348	.	-	.	ID=id3131;Note=Pfam match to entry PF02413 DUF144%2C Domain of unknown function DUF144%2C score 103.3%2C E-value 3.2e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF02413
AM286415.1	EMBL	gene	1862537	1863919	.	-	.	ID=gene1647;Name=gpH;gbkey=Gene;gene=gpH;gene_biotype=protein_coding;locus_tag=YE1662
AM286415.1	EMBL	CDS	1862537	1863919	.	-	0	ID=cds1587;Parent=gene1647;Dbxref=EnsemblGenomes-Gn:YE1662,EnsemblGenomes-Tr:CAL11736,InterPro:IPR011083,InterPro:IPR022225,UniProtKB/TrEMBL:A1JNE2,NCBI_GP:CAL11736.1;Name=CAL11736.1;Note=Similar to Salmonella typhi probable variable tail fibre protein Sty3691 SWALL:Q8Z343 (EMBL:AL627279) (504 aa) fasta scores: E(): 1.6e-38%2C 43.83 38d in 511 aa%2C and to Salmonella typhimurium fels-2 prophage: similar to tail fiber protein in phage P2 Stm2706 SWALL:Q8ZMU5 (EMBL:AE008823) (524 aa) fasta scores: E(): 2.2e-38%2C62.22 38d in 180 aa;gbkey=CDS;gene=gpH;inference=similar to sequence:INSDC:AL627279;product=probable variable tail fibre protein;protein_id=CAL11736.1;transl_table=11
AM286415.1	EMBL	gene	1863916	1864458	.	-	.	ID=gene1648;Name=gpI;gbkey=Gene;gene=gpI;gene_biotype=protein_coding;locus_tag=YE1663
AM286415.1	EMBL	CDS	1863916	1864458	.	-	0	ID=cds1588;Parent=gene1648;Dbxref=EnsemblGenomes-Gn:YE1663,EnsemblGenomes-Tr:CAL11737,InterPro:IPR006521,UniProtKB/TrEMBL:A1JNE5,NCBI_GP:CAL11737.1;Name=CAL11737.1;Note=Similar to Bacteriophage P2 tail protein I SWALL:VPI_BPP2 (SWALL:P26701) (176 aa) fasta scores: E(): 8.4e-50%2C 66.47 38d in 173 aa%2C and to Bacteriophage 186 orf38 SWALL:Q37841 (EMBL:U32222) (176 aa) fasta scores: E(): 2.2e-47%2C 64.91 38d in 171 aa;gbkey=CDS;gene=gpI;inference=similar to sequence:UniProtKB:P26701;product=phage tail protein;protein_id=CAL11737.1;transl_table=11
AM286415.1	EMBL	gene	1864451	1865359	.	-	.	ID=gene1649;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=YE1664
AM286415.1	EMBL	CDS	1864451	1865359	.	-	0	ID=cds1589;Parent=gene1649;Dbxref=EnsemblGenomes-Gn:YE1664,EnsemblGenomes-Tr:CAL11738,InterPro:IPR006949,InterPro:IPR014507,UniProtKB/TrEMBL:A1JNE6,NCBI_GP:CAL11738.1;Name=CAL11738.1;Note=Similar to Bacteriophage P2 baseplate assembly protein J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 8.8e-75%2C 69.2 38d in 302 aa%2C Bacteriophage 186 P2 J homolog L SWALL:Q37840 (EMBL:U32222) (302 aa) fasta scores: E(): 2.9e-75%2C 69.53 38d in 302 aa and Salmonella typhi phage baseplate assembly protein Sty3689 SWALL:Q8Z344 (EMBL:AL627279) (302 aa) fasta scores: E(): 8.8e-75%2C 69.86 38d in 302 aa;gbkey=CDS;gene=gpJ;inference=similar to sequence:UniProtKB:P51767;product=baseplate assembly protein;protein_id=CAL11738.1;transl_table=11
AM286415.1	EMBL	gene	1865356	1865706	.	-	.	ID=gene1650;Name=gpW;gbkey=Gene;gene=gpW;gene_biotype=protein_coding;locus_tag=YE1665
AM286415.1	EMBL	CDS	1865356	1865706	.	-	0	ID=cds1590;Parent=gene1650;Dbxref=EnsemblGenomes-Gn:YE1665,EnsemblGenomes-Tr:CAL11739,GOA:A1JNE9,InterPro:IPR007048,InterPro:IPR015801,UniProtKB/TrEMBL:A1JNE9,NCBI_GP:CAL11739.1;Name=CAL11739.1;Note=Similar to Bacteriophage P2 baseplate assembly protein W SWALL:VPW_BPP2 (SWALL:P51768) (115 aa) fasta scores: E(): 1.1e-18%2C 48.18 38d in 110 aa%2C Bacteriophage 186 protein M SWALL:O80315 (EMBL:U32222) (115 aa) fasta scores: E(): 5.9e-20%2C 50.9 38d in 110 aa and Salmonella typhi phage baseplate assembly protein Sty3688 SWALL:Q8Z345 (EMBL:AL627279) (119 aa) fasta scores: E(): 2.1e-18%2C 48.21 38d in 112 aa;gbkey=CDS;gene=gpW;inference=similar to sequence:UniProtKB:P51768;product=baseplate assembly protein;protein_id=CAL11739.1;transl_table=11
AM286415.1	EMBL	gene	1865703	1866350	.	-	.	ID=gene1651;Name=gpV;gbkey=Gene;gene=gpV;gene_biotype=protein_coding;locus_tag=YE1666
AM286415.1	EMBL	CDS	1865703	1866350	.	-	0	ID=cds1591;Parent=gene1651;Dbxref=EnsemblGenomes-Gn:YE1666,EnsemblGenomes-Tr:CAL11740,InterPro:IPR006531,InterPro:IPR013046,UniProtKB/TrEMBL:A1JNF1,NCBI_GP:CAL11740.1;Name=CAL11740.1;Note=Similar to Bacteriophage P2 baseplate assembly protein V SWALL:VPV_BPP2 (SWALL:P31340) (211 aa) fasta scores: E(): 4.3e-32%2C 46.6 38d in 206 aa%2C Bacteriophage 186 orf32 SWALL:O80314 (EMBL:U32222) (213 aa) fasta scores: E(): 5.3e-34%2C 48.8 38d in 209 aa and to Salmonella typhi putative phage baseplate assembly protein Sty3687 SWALL:Q8Z346 (EMBL:AL627279) (192 aa) fasta scores: E(): 4e-16%2C 37.37 38d in 206 aa;gbkey=CDS;gene=gpV;inference=similar to sequence:UniProtKB:P31340;product=baseplate assembly protein;protein_id=CAL11740.1;transl_table=11
AM286415.1	EMBL	gene	1866458	1867045	.	-	.	ID=gene1652;Name=YE1667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1667
AM286415.1	EMBL	CDS	1866458	1867045	.	-	0	ID=cds1592;Parent=gene1652;Dbxref=EnsemblGenomes-Gn:YE1667,EnsemblGenomes-Tr:CAL11741,InterPro:IPR003812,UniProtKB/TrEMBL:A1JNF3,NCBI_GP:CAL11741.1;Name=CAL11741.1;Note=Similar to Escherichia coli cell division/filamentation protein Fic or b3361 SWALL:FIC_ECOLI (SWALL:P20605) (200 aa) fasta scores: E(): 1.8e-26%2C 37.5 38d in 192 aa and to Salmonella typhimurium cell filamentation protein Fic or stm3470 SWALL:FIC_SALTY (SWALL:P20751) (200 aa) fasta scores: E(): 3.2e-29%2C 40.1 id in 192 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P20751;product=putative Fic-related phage protein;protein_id=CAL11741.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1866464	1866973	.	-	.	ID=id3132;Note=Pfam match to entry PF02661 Fic%2C Fic protein family%2C score 93.6%2C E-value 2.6e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF02661
AM286415.1	EMBL	gene	1867324	1867941	.	-	.	ID=gene1653;Name=gpS;gbkey=Gene;gene=gpS;gene_biotype=protein_coding;locus_tag=YE1669
AM286415.1	EMBL	CDS	1867324	1867941	.	-	0	ID=cds1593;Parent=gene1653;Dbxref=EnsemblGenomes-Gn:YE1669,EnsemblGenomes-Tr:CAL11742,InterPro:IPR006522,UniProtKB/TrEMBL:A1JNF7,NCBI_GP:CAL11742.1;Name=CAL11742.1;Note=Similar to many bacteriophage tail completion proteins: Bacteriophage P2 tail completion protein S SWALL:VPS_BPP2 (SWALL:P36934) (150 aa) fasta scores: E(): 0.055%2C 28.92 38d in 204 aa%2C Salmonella typhi putative phage tail protein Sty3686 SWALL:Q8Z347 (EMBL:AL627279) (148 aa) fasta scores: E(): 0.003%2C 26.23 38d in 202 aa and to Salmonella typhimurium fels-2 prophage tail completion protein SWALL:Q8ZMU0 (EMBL:AE008823) (148 aa) fasta scores: E(): 0.0053%2C 27.08 38d in 192 aa;gbkey=CDS;gene=gpS;inference=similar to sequence:UniProtKB:P36934;product=tail completion protein;protein_id=CAL11742.1;transl_table=11
AM286415.1	EMBL	gene	1867984	1868454	.	-	.	ID=gene1654;Name=gpR;gbkey=Gene;gene=gpR;gene_biotype=protein_coding;locus_tag=YE1670
AM286415.1	EMBL	CDS	1867984	1868454	.	-	0	ID=cds1594;Parent=gene1654;Dbxref=EnsemblGenomes-Gn:YE1670,EnsemblGenomes-Tr:CAL11743,InterPro:IPR009678,UniProtKB/TrEMBL:A1JNF9,NCBI_GP:CAL11743.1;Name=CAL11743.1;Note=Similar to Bacteriophage P2 tail completion protein R SWALL:VPR_BPP2 (SWALL:P36933) (155 aa) fasta scores: E(): 1.6e-19%2C 40.26 38d in 154 aa and to Salmonella typhimurium%2C and Salmonella typhi fels-2 prophage: tail completion proteins stm2712 or sty4617 SWALL:Q8XF29 (EMBL:AE008823) (143 aa) fasta scores: E(): 3.1e-21%2C46.66 38d in 135 aa;gbkey=CDS;gene=gpR;inference=similar to sequence:UniProtKB:P36933;product=tail completion protein r;protein_id=CAL11743.1;transl_table=11
AM286415.1	EMBL	gene	1868553	1868978	.	-	.	ID=gene1655;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=YE1671
AM286415.1	EMBL	CDS	1868553	1868978	.	-	0	ID=cds1595;Parent=gene1655;Dbxref=EnsemblGenomes-Gn:YE1671,EnsemblGenomes-Tr:CAL11744,InterPro:IPR020000,UniProtKB/TrEMBL:A1JNG0,NCBI_GP:CAL11744.1;Name=CAL11744.1;Note=Similar to Bacteriophage P2 protein LysB SWALL:LYSB_BPP2 (SWALL:P51770) (141 aa) fasta scores: E(): 2e-07%2C 37.39 38d in 123 aa and Salmonella typhimurium fels-2 prophage: similar to lysis protein Stm2714 SWALL:Q8ZMT8 (EMBL:AE008823) (142 aa) fasta scores: E(): 1.4e-13%2C 41.79 38d in 134 aa;gbkey=CDS;gene=lysB;inference=similar to sequence:UniProtKB:P51770;product=phage lysin;protein_id=CAL11744.1;transl_table=11
AM286415.1	EMBL	gene	1868983	1869378	.	-	.	ID=gene1656;Name=YE1672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1672
AM286415.1	EMBL	CDS	1868983	1869378	.	-	0	ID=cds1596;Parent=gene1656;Dbxref=EnsemblGenomes-Gn:YE1672,EnsemblGenomes-Tr:CAL11745,InterPro:IPR009045,UniProtKB/TrEMBL:A1JNG2,NCBI_GP:CAL11745.1;Name=CAL11745.1;Note=Similar to many endolysins phage related: including: Listeria innocua phagelysin Cply2438 SWALL:Q48583 (EMBL:X89234) (287 aa) fasta scores: E(): 0.022%2C 30.95 38d in 126 aa and to Bacteriophage A500 L-alanyl-D-glutamate peptidase Ply500 SWALL:AEPE_BPA50 (SWALL:Q37979) (289 aa) fasta scores: E(): 0.029%2C 30.15 id in 126 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q37979;product=putative phagelysin;protein_id=CAL11745.1;transl_table=11
AM286415.1	EMBL	gene	1869365	1869751	.	-	.	ID=gene1657;Name=YE1672A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1672A
AM286415.1	EMBL	CDS	1869365	1869751	.	-	0	ID=cds1597;Parent=gene1657;Dbxref=EnsemblGenomes-Gn:YE1672A,EnsemblGenomes-Tr:CAL11746,InterPro:IPR006481,UniProtKB/TrEMBL:A1JNG4,NCBI_GP:CAL11746.1;Name=CAL11746.1;gbkey=CDS;product=putative phage holin;protein_id=CAL11746.1;transl_table=11
AM286415.1	EMBL	gene	1869789	1869992	.	-	.	ID=gene1658;Name=gpX;gbkey=Gene;gene=gpX;gene_biotype=protein_coding;locus_tag=YE1673
AM286415.1	EMBL	CDS	1869789	1869992	.	-	0	ID=cds1598;Parent=gene1658;Dbxref=EnsemblGenomes-Gn:YE1673,EnsemblGenomes-Tr:CAL11747,InterPro:IPR008861,UniProtKB/TrEMBL:A1JNG8,NCBI_GP:CAL11747.1;Name=CAL11747.1;Note=Similar to many P2-family bacteriophage tail proteins including: Bacteriophage P2 tail protein X SWALL:VPX_BPP2 (SWALL:P51772) (67 aa) fasta scores: E(): 1.4e-10%2C 55.88 38d in 68 aa%2C Salmonella typhi putative phage tail protein Sty4622 SWALL:Q8Z1F2 (EMBL:AL627283) (67 aa) fasta scores: E(): 6.1e-17%2C 65.67 38d in 67 aa and Salmonella typhimurium fels-2 prophage: similar to gpx in phage p2 stm2717 SWALL:Q8ZMT5 (EMBL:AE008823) (67 aa) fasta scores: E(): 1.6e-16%2C 64.17 38d in 67 aa;gbkey=CDS;gene=gpX;inference=similar to sequence:UniProtKB:P51772;product=phage tail protein;protein_id=CAL11747.1;transl_table=11
AM286415.1	EMBL	gene	1869993	1870475	.	-	.	ID=gene1659;Name=gpL;gbkey=Gene;gene=gpL;gene_biotype=protein_coding;locus_tag=YE1674
AM286415.1	EMBL	CDS	1869993	1870475	.	-	0	ID=cds1599;Parent=gene1659;Dbxref=EnsemblGenomes-Gn:YE1674,EnsemblGenomes-Tr:CAL11748,GOA:A1JNH3,InterPro:IPR009225,UniProtKB/TrEMBL:A1JNH3,NCBI_GP:CAL11748.1;Name=CAL11748.1;Note=Similar to Bacteriophage P2 head completion/stabilization protein L SWALL:VPL_BPP2 (SWALL:P25475) (169 aa) fasta scores: E(): 1.8e-17%2C 39.72 id in 146 aa%2C and to Salmonella typhi putative capsid completion protein Sty4623 SWALL:Q8Z1F1 (EMBL:AL627283) (154 aa) fasta scores: E(): 1.8e-21%2C 46.05 38d in 152 aa;gbkey=CDS;gene=gpL;inference=similar to sequence:UniProtKB:P25475;product=phage head completion/stabilization protein;protein_id=CAL11748.1;transl_table=11
AM286415.1	EMBL	gene	1870596	1871306	.	-	.	ID=gene1660;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=YE1675
AM286415.1	EMBL	CDS	1870596	1871306	.	-	0	ID=cds1600;Parent=gene1660;Dbxref=EnsemblGenomes-Gn:YE1675,EnsemblGenomes-Tr:CAL11749,GOA:A1JNH7,InterPro:IPR010270,UniProtKB/TrEMBL:A1JNH7,NCBI_GP:CAL11749.1;Name=CAL11749.1;Note=Similar to Bacteriophage P2 terminase%2C endonuclease subunit M SWALL:VPM_BPP2 (SWALL:P25476) (247 aa) fasta scores: E(): 1.3e-22%2C 39.36 38d in 221 aa and Ralstonia solanacearum probable bacteriophage protein rsc1936 or rs03505 SWALL:Q8XY27 (EMBL:AL646067) (240 aa) fasta scores: E(): 9.9e-28%2C 40.34 38d in 233 aa;gbkey=CDS;gene=gpM;inference=similar to sequence:UniProtKB:P25476;product=phage terminase/endonuclease subunit;protein_id=CAL11749.1;transl_table=11
AM286415.1	EMBL	gene	1871335	1872381	.	-	.	ID=gene1661;Name=gpN;gbkey=Gene;gene=gpN;gene_biotype=protein_coding;locus_tag=YE1676
AM286415.1	EMBL	CDS	1871335	1872381	.	-	0	ID=cds1601;Parent=gene1661;Dbxref=EnsemblGenomes-Gn:YE1676,EnsemblGenomes-Tr:CAL11750,GOA:A1JNH9,InterPro:IPR006441,UniProtKB/TrEMBL:A1JNH9,NCBI_GP:CAL11750.1;Name=CAL11750.1;Note=Similar to Bacteriophage P2 major capsid protein precursor N SWALL:VPN_BPP2 (SWALL:P25477) (357 aa) fasta scores: E(): 2.5e-61%2C 49.13 38d in 348 aa and Bacteriophage PhiD5 major capsid protein N SWALL:Q94MF9 (EMBL:AJ298557) (357 aa) fasta scores: E(): 1.2e-62%2C49.42 38d in 348 aa;gbkey=CDS;gene=gpN;inference=similar to sequence:UniProtKB:P25477;product=major phage capsid protein precursor;protein_id=CAL11750.1;transl_table=11
AM286415.1	EMBL	gene	1872414	1873268	.	-	.	ID=gene1662;Name=gpO;gbkey=Gene;gene=gpO;gene_biotype=protein_coding;locus_tag=YE1677
AM286415.1	EMBL	CDS	1872414	1873268	.	-	0	ID=cds1602;Parent=gene1662;Dbxref=EnsemblGenomes-Gn:YE1677,EnsemblGenomes-Tr:CAL11752,GOA:A1JNI1,InterPro:IPR009228,UniProtKB/TrEMBL:A1JNI1,NCBI_GP:CAL11752.1;Name=CAL11752.1;Note=Similar to Bacteriophage P2 presumed capsid scaffolding protein O SWALL:VPO_BPP2 (SWALL:P25478) (284 aa) fasta scores: E(): 4.8e-36%2C 42.7 38d in 281 aa and to Bacteriophage 299 capsid scaffolding protein O SWALL:Q94MK3 (EMBL:AJ298566) (284 aa) fasta scores: E(): 4.2e-36%2C 43.61 38d in 282 aa;gbkey=CDS;gene=gpO;inference=similar to sequence:UniProtKB:P25478;product=putative phage capsid scaffolding protein;protein_id=CAL11752.1;transl_table=11
AM286415.1	EMBL	gene	1873426	1875144	.	+	.	ID=gene1663;Name=gpP;gbkey=Gene;gene=gpP;gene_biotype=protein_coding;locus_tag=YE1678
AM286415.1	EMBL	CDS	1873426	1875144	.	+	0	ID=cds1603;Parent=gene1663;Dbxref=EnsemblGenomes-Gn:YE1678,EnsemblGenomes-Tr:CAL11753,GOA:A1JNI4,InterPro:IPR004921,InterPro:IPR010332,UniProtKB/TrEMBL:A1JNI4,NCBI_GP:CAL11753.1;Name=CAL11753.1;Note=Similar to Bacteriophage HP1 probable terminase%2CATPase subunit SWALL:VPP_BPHP1 (SWALL:P51718) (607 aa) fasta scores: E(): 5.1e-65%2C 37.05 38d in 591 aa%2CSalmonella typhi probable terminase subunit Sty4627 SWALL:Q8Z1E7 (EMBL:AL627283) (588 aa) fasta scores: E(): 1.8e-98%2C 54.18 38d in 574 aa and Salmonella typhimurium fels-2 prophage: similar to gpP%2C ATP charging%2C in phage P2 Stm2722 SWALL:Q8ZMT0 (EMBL:AE008824) (588 aa) fasta scores: E(): 3.7e-98%2C 54 38d in 574 aa;gbkey=CDS;gene=gpP;inference=similar to sequence:UniProtKB:P51718;product=probable terminase%2C ATPase subunit;protein_id=CAL11753.1;transl_table=11
AM286415.1	EMBL	gene	1875147	1876187	.	+	.	ID=gene1664;Name=gpQ;gbkey=Gene;gene=gpQ;gene_biotype=protein_coding;locus_tag=YE1679
AM286415.1	EMBL	CDS	1875147	1876187	.	+	0	ID=cds1604;Parent=gene1664;Dbxref=EnsemblGenomes-Gn:YE1679,EnsemblGenomes-Tr:CAL11754,InterPro:IPR006430,InterPro:IPR006944,UniProtKB/TrEMBL:A1JNI5,NCBI_GP:CAL11754.1;Name=CAL11754.1;Note=Similar to Bacteriophage P2 presumed portal vertex protein Q SWALL:VPQ_BPP2 (SWALL:P25480) (344 aa) fasta scores: E(): 5e-70%2C 52.52 38d in 337 aa and Salmonella typhi probable capsid portal protein Sty4628 SWALL:Q8Z1E6 (EMBL:AL627283) (348 aa) fasta scores: E(): 7.6e-82%2C58.65 38d in 341 aa;gbkey=CDS;gene=gpQ;inference=similar to sequence:UniProtKB:P25480;product=putative portal vertex protein;protein_id=CAL11754.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1876544	1881827	.	-	.	ID=id3133;Note=Low G+C region;gbkey=misc_feature
AM286415.1	EMBL	gene	1876566	1877924	.	-	.	ID=gene1665;Name=YE1681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1681
AM286415.1	EMBL	CDS	1876566	1877924	.	-	0	ID=cds1605;Parent=gene1665;Dbxref=EnsemblGenomes-Gn:YE1681,EnsemblGenomes-Tr:CAL11755,GOA:A1JNI9,InterPro:IPR001525,InterPro:IPR018117,InterPro:IPR029063,UniProtKB/TrEMBL:A1JNI9,NCBI_GP:CAL11755.1;Name=CAL11755.1;Note=Similar to many DNA methylases including: Desulfovibrio desulfuricans modification methylase DdeI or DdeM SWALL:MTD1_DESDN (SWALL:P05302) (415 aa) fasta scores: E(): 1.3e-13%2C 32.27 38d in 440 aa and Nostoc sp. ATCC 29411 modification methylase NspiM SWALL:Q9ZHP3 (EMBL:AF056036) (397 aa) fasta scores: E(): 3.9e-13%2C30.46 38d in 430 aa%3B deleted EC_number 2.1.1.73;gbkey=CDS;inference=similar to sequence:UniProtKB:P05302;product=prophage encoded DNA modification methylase;protein_id=CAL11755.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1876620	1877924	.	-	.	ID=id3134;Note=Pfam match to entry PF00145 DNA_methylase%2C C-5 cytosine-specific DNA methylase%2C score 157.2%2C E-value 1.8e-44;gbkey=misc_feature;inference=protein motif:PFAM:PF00145
AM286415.1	EMBL	sequence_feature	1876626	1876682	.	-	.	ID=id3135;Note=PS00095 C-5 cytosine-specific DNA methylases C-terminal signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00095
AM286415.1	EMBL	sequence_feature	1877634	1877672	.	-	.	ID=id3136;Note=PS00094 C-5 cytosine-specific DNA methylases active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00094
AM286415.1	EMBL	gene	1878009	1878452	.	-	.	ID=gene1666;Name=YE1682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1682
AM286415.1	EMBL	CDS	1878009	1878452	.	-	0	ID=cds1606;Parent=gene1666;Dbxref=EnsemblGenomes-Gn:YE1682,EnsemblGenomes-Tr:CAL11756,InterPro:IPR004274,InterPro:IPR023214,UniProtKB/TrEMBL:A1JNJ5,NCBI_GP:CAL11756.1;Name=CAL11756.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11756.1;transl_table=11
AM286415.1	EMBL	gene	1878468	1879427	.	-	.	ID=gene1667;Name=YE1683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1683
AM286415.1	EMBL	CDS	1878468	1879427	.	-	0	ID=cds1607;Parent=gene1667;Dbxref=EnsemblGenomes-Gn:YE1683,EnsemblGenomes-Tr:CAL11757,GOA:A1JNJ7,InterPro:IPR001789,InterPro:IPR011006,UniProtKB/TrEMBL:A1JNJ7,NCBI_GP:CAL11757.1;Name=CAL11757.1;Note=Weakly similar to a proposed two-component system response regulator from Streptococcus agalactiae DltR SWALL:Q8VM69 (EMBL:AJ291784) (224 aa) fasta scores: E(): 0.068%2C 22.5 38d in 200 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ291784;product=putative prophage encoded two-component system response regulator;protein_id=CAL11757.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1879026	1879415	.	-	.	ID=id3137;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score -15.7%2C E-value 0.0088;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	1879424	1881802	.	-	.	ID=gene1668;Name=YE1684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1684
AM286415.1	EMBL	CDS	1879424	1881802	.	-	0	ID=cds1608;Parent=gene1668;Dbxref=EnsemblGenomes-Gn:YE1684,EnsemblGenomes-Tr:CAL11758,GOA:A1JNJ9,InterPro:IPR003594,InterPro:IPR004358,UniProtKB/TrEMBL:A1JNJ9,NCBI_GP:CAL11758.1;Name=CAL11758.1;gbkey=CDS;product=putative prophage encoded two-component system histidine kinase;protein_id=CAL11758.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1879427	1879741	.	-	.	ID=id3138;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 25.4%2C E-value 6.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	1881578	1881709	.	-	.	ID=id3139;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 13.1%2C E-value 0.0014;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	1882132	1884420	.	-	.	ID=gene1669;Name=gpA;gbkey=Gene;gene=gpA;gene_biotype=protein_coding;locus_tag=YE1686
AM286415.1	EMBL	CDS	1882132	1884420	.	-	0	ID=cds1609;Parent=gene1669;Dbxref=EnsemblGenomes-Gn:YE1686,EnsemblGenomes-Tr:CAL11759,GOA:A1JNK2,InterPro:IPR008766,UniProtKB/TrEMBL:A1JNK2,NCBI_GP:CAL11759.1;Name=CAL11759.1;Note=Similar to Bacteriophage P2 replication gene A protein A SWALL:VPA_BPP2 (SWALL:Q06419) (761 aa) fasta scores: E(): 7.4e-66%2C 34.53 38d in 779 aa and to Bacteriophage 186 replication gene A protein A or cp87 SWALL:VPA_BP186 (SWALL:P41064) (694 aa) fasta scores: E(): 2.8e-89%2C 43.82 38d in 696 aa;gbkey=CDS;gene=gpA;inference=similar to sequence:UniProtKB:Q06419;product=phage replication protein;protein_id=CAL11759.1;transl_table=11
AM286415.1	EMBL	gene	1884420	1884644	.	-	.	ID=gene1670;Name=YE1687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1687
AM286415.1	EMBL	CDS	1884420	1884644	.	-	0	ID=cds1610;Parent=gene1670;Dbxref=EnsemblGenomes-Gn:YE1687,EnsemblGenomes-Tr:CAL11760,GOA:A1JNK3,InterPro:IPR000962,InterPro:IPR012783,UniProtKB/TrEMBL:A1JNK3,NCBI_GP:CAL11760.1;Name=CAL11760.1;Note=Similar to Bacteriophage P2 hypothetical protein SWALL:YO82_BPP2 (SWALL:Q06424) (74 aa) fasta scores: E(): 3.5e-11%2C 48.64 38d in 74 aa and to Bacteriophage 186 hypothetical protein cp80 SWALL:CP80_BP186 (SWALL:P41059) (75 aa) fasta scores: E(): 1.8e-11%2C 50 38d in 74 aa. Also weakly similar to Escherichia coli plasmid R100 Zinc-finger protein TraR SWALL:O32533 (EMBL:AF005044) (73 aa) fasta scores: E(): 1.6e-05%2C 36.11 38d in 72 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q06424;product=conserved hypothetical phage protein;protein_id=CAL11760.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1884444	1884644	.	-	.	ID=id3140;Note=Pfam match to entry PF01258 zf_dskA_traR%2CProkaryotic dksA/traR C4-type zinc finger%2C score 77.9%2CE-value 1.3e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF01258
AM286415.1	EMBL	gene	1884644	1884871	.	-	.	ID=gene1671;Name=YE1688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1688
AM286415.1	EMBL	CDS	1884644	1884871	.	-	0	ID=cds1611;Parent=gene1671;Dbxref=EnsemblGenomes-Gn:YE1688,EnsemblGenomes-Tr:CAL11761,InterPro:IPR020126,UniProtKB/TrEMBL:A1JNK5,NCBI_GP:CAL11761.1;Name=CAL11761.1;Note=Similar to Bacteriophage P2 hypothetical protein orf80 SWALL:YO80_BPP2 (SWALL:Q06422) (74 aa) fasta scores: E(): 0.9%2C 35.08 38d in 57 aa%2C Salmonella typhimurium fels-2 prophage: similar to protein in phage 186 Stm2732 SWALL:Q8ZMS1 (EMBL:AE008824) (77 aa) fasta scores: E(): 0.002%2C 34.24 38d in 73 aa and Salmonella typhi hypothetical protein Sty4639 SWALL:Q8Z1D7 (EMBL:AL627283) (77 aa) fasta scores: E(): 0.0073%2C 32.87 38d in 73 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q06422;product=conserved hypothetical phage protein;protein_id=CAL11761.1;transl_table=11
AM286415.1	EMBL	gene	1884949	1885197	.	-	.	ID=gene1672;Name=YE1689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1689
AM286415.1	EMBL	CDS	1884949	1885197	.	-	0	ID=cds1612;Parent=gene1672;Dbxref=EnsemblGenomes-Gn:YE1689,EnsemblGenomes-Tr:CAL11762,UniProtKB/TrEMBL:A1JNK6,NCBI_GP:CAL11762.1;Name=CAL11762.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11762.1;transl_table=11
AM286415.1	EMBL	gene	1885233	1885514	.	-	.	ID=gene1673;Name=YE1689A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1689A
AM286415.1	EMBL	CDS	1885233	1885514	.	-	0	ID=cds1613;Parent=gene1673;Dbxref=EnsemblGenomes-Gn:YE1689A,EnsemblGenomes-Tr:CAL11763,UniProtKB/TrEMBL:A1JNK8,NCBI_GP:CAL11763.1;Name=CAL11763.1;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11763.1;transl_table=11
AM286415.1	EMBL	gene	1885529	1885795	.	-	.	ID=gene1674;Name=YE1690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1690
AM286415.1	EMBL	CDS	1885529	1885795	.	-	0	ID=cds1614;Parent=gene1674;Dbxref=EnsemblGenomes-Gn:YE1690,EnsemblGenomes-Tr:CAL11764,GOA:A1JNK9,UniProtKB/TrEMBL:A1JNK9,NCBI_GP:CAL11764.1;Name=CAL11764.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage DNA-binding protein;protein_id=CAL11764.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1885646	1885711	.	-	.	ID=id3141;Note=Predicted helix-turn-helix motif with score 1037.000%2C SD 2.72 at aa 29-50%2C sequence ESIADYAKRQGINPNTVRTQAD;gbkey=misc_feature
AM286415.1	EMBL	gene	1885885	1886184	.	+	.	ID=gene1675;Name=cI;gbkey=Gene;gene=cI;gene_biotype=protein_coding;locus_tag=YE1691
AM286415.1	EMBL	CDS	1885885	1886184	.	+	0	ID=cds1615;Parent=gene1675;Dbxref=EnsemblGenomes-Gn:YE1691,EnsemblGenomes-Tr:CAL11765,GOA:A1JNL3,InterPro:IPR001387,InterPro:IPR010982,UniProtKB/TrEMBL:A1JNL3,NCBI_GP:CAL11765.1;Name=CAL11765.1;Note=Similar to Bacteriophage P2 repressor protein C SWALL:RPC_BPP2 (SWALL:P04132) (99 aa) fasta scores: E(): 1.6e-11%2C 38.38 38d in 99 aa and to Bacteriophage WPhi repressor protein C SWALL:Q9T1J6 (EMBL:AJ245959) (97 aa) fasta scores: E(): 2.8e-16%2C 54.83 38d in 93 aa;gbkey=CDS;gene=cI;inference=similar to sequence:UniProtKB:P04132;product=phage repressor protein;protein_id=CAL11765.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1885909	1886076	.	+	.	ID=id3142;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 32.1%2C E-value 8.3e-07;gbkey=misc_feature;gene=cI;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	1885936	1886001	.	+	.	ID=id3143;Note=Predicted helix-turn-helix motif with score 1427.000%2C SD 4.05 at aa 22-43%2C sequence LTQKSFSEQAGIPLGTIKNYET;gbkey=misc_feature;gene=cI
AM286415.1	EMBL	gene	1886248	1887231	.	+	.	ID=gene1676;Name=int;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=YE1692
AM286415.1	EMBL	CDS	1886248	1887231	.	+	0	ID=cds1616;Parent=gene1676;Dbxref=EnsemblGenomes-Gn:YE1692,EnsemblGenomes-Tr:CAL11767,GOA:A1JNL5,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB/TrEMBL:A1JNL5,NCBI_GP:CAL11767.1;Name=CAL11767.1;Note=Similar to Bacteriophage P2 Integrase Int SWALL:VINT_BPP2 (SWALL:P36932) (337 aa) fasta scores: E(): 4.3e-57%2C 46.27 38d in 322 aa and Bacteriophage 186 Integrase inT SWALL:VINT_BP186 (SWALL:P06723) (336 aa) fasta scores: E(): 1.4e-39%2C 46.86 38d in 335 aa;gbkey=CDS;gene=int;inference=similar to sequence:UniProtKB:P36932;product=P2-like phage integrase;protein_id=CAL11767.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1886740	1887192	.	+	.	ID=id3144;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 106.7%2C E-value 3e-29;gbkey=misc_feature;gene=int;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	1887316	1888287	.	+	.	ID=gene1677;Name=YE1693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1693
AM286415.1	EMBL	CDS	1887316	1888287	.	+	0	ID=cds1617;Parent=gene1677;Dbxref=EnsemblGenomes-Gn:YE1693,EnsemblGenomes-Tr:CAL11768,InterPro:IPR011335,UniProtKB/TrEMBL:A1JNL4,NCBI_GP:CAL11768.1;Name=CAL11768.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11768.1;transl_table=11
AM286415.1	EMBL	repeat_region	1888448	1888461	.	+	.	ID=id3145;Note=Direct repeat flanking prophage%2C 14mer;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	1888456	1889173	.	+	.	ID=id3146;Note=IS1541;gbkey=repeat_region
AM286415.1	EMBL	gene	1888605	1889063	.	+	.	ID=gene1678;Name=tnp;gbkey=Gene;gene=tnp;gene_biotype=protein_coding;locus_tag=YE1694
AM286415.1	EMBL	CDS	1888605	1889063	.	+	0	ID=cds1618;Parent=gene1678;Dbxref=EnsemblGenomes-Gn:YE1694,EnsemblGenomes-Tr:CAL11769,GOA:A1JKI7,InterPro:IPR002686,UniProtKB/TrEMBL:A1JKI7,NCBI_GP:CAL11769.1;Name=CAL11769.1;Note=Previously sequenced as Yersinia enterocolitica IS1541 element transposase Tnp SWALL:Q9X9G7 (EMBL:AJ238016) (152 aa) fasta scores: E(): 1.2e-66%2C 100 id in 152 aa. Also similar to many other IS200-like transposases e.g. Salmonella typhimurium%2C and Salmonella typhi transposase for insertion sequence element IS200 SWALL:T200_SALTY (SWALL:Q57334) (152 aa) fasta scores: E(): 9.6e-64%2C 94.73 38d in 152 aa;gbkey=CDS;gene=tnp;inference=similar to sequence:UniProtKB:Q57334;product=transposase for IS1541;protein_id=CAL11769.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1888659	1888970	.	+	.	ID=id3147;Note=Pfam match to entry PF01797 Transposase_17%2CTransposase IS200 like%2C score 239.5%2C E-value 3.1e-69;gbkey=misc_feature;gene=tnp;inference=protein motif:PFAM:PF01797
AM286415.1	EMBL	gene	1889227	1890057	.	-	.	ID=gene1679;Name=YE1695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1695
AM286415.1	EMBL	CDS	1889227	1890057	.	-	0	ID=cds1619;Parent=gene1679;Dbxref=EnsemblGenomes-Gn:YE1695,EnsemblGenomes-Tr:CAL11770,InterPro:IPR021109,UniProtKB/TrEMBL:A1JNL7,NCBI_GP:CAL11770.1;Name=CAL11770.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL11770.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1889494	1889529	.	-	.	ID=id3148;Note=PS00141 Eukaryotic and viral aspartyl proteases active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00141
AM286415.1	EMBL	signal_peptide	1890064	1890144	.	-	.	ID=id3149;Note=Signal peptide predicted for YE1695 by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.955 between residues 27 and 28;gbkey=sig_peptide
AM286415.1	EMBL	gene	1890125	1891669	.	-	.	ID=gene1680;Name=YE1696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1696
AM286415.1	EMBL	CDS	1890125	1891669	.	-	0	ID=cds1620;Parent=gene1680;Dbxref=EnsemblGenomes-Gn:YE1696,EnsemblGenomes-Tr:CAL11771,GOA:A1JNL8,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNL8,NCBI_GP:CAL11771.1;Name=CAL11771.1;Note=Similar to several secretion proteins including: Escherichia coli probable microcin h47 secretion ATP-binding protein MchF SWALL:MCHF_ECOLI (SWALL:Q9EXN5) (698 aa) fasta scores: E(): 4.1e-62%2C 40.39 38d in 453 aa and to Pseudomonas aeruginosa probable toxin transporter Pa4143 SWALL:Q9HWN8 (EMBL:AE004831) (719 aa) fasta scores: E(): 1.2e-72%2C 47.27 38d in 459 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9EXN5;product=putative ABC transport protein%2C ATP-binding component;protein_id=CAL11771.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1890170	1890718	.	-	.	ID=id3150;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 196.6%2C E-value 2.6e-56;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1890341	1890385	.	-	.	ID=id3151;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1890674	1890697	.	-	.	ID=id3152;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1890938	1891669	.	-	.	ID=id3153;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 54.6%2C E-value 1.4e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	1891343	1891402	.	-	.	ID=id3154;Note=3 probable transmembrane helices predicted for YE1696 by TMHMM2.0 at aa 134-153%2C 157-179 and 239-261;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1891265	1891333	.	-	.	ID=id3154;Note=3 probable transmembrane helices predicted for YE1696 by TMHMM2.0 at aa 134-153%2C 157-179 and 239-261;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1891019	1891087	.	-	.	ID=id3154;Note=3 probable transmembrane helices predicted for YE1696 by TMHMM2.0 at aa 134-153%2C 157-179 and 239-261;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	1891740	1892450	.	-	.	ID=gene1681;Name=YE1697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1697
AM286415.1	EMBL	CDS	1891740	1892450	.	-	0	ID=cds1621;Parent=gene1681;Dbxref=EnsemblGenomes-Gn:YE1697,EnsemblGenomes-Tr:CAL11772,UniProtKB/TrEMBL:A1JNL9,NCBI_GP:CAL11772.1;Name=CAL11772.1;Note=Weakly similar to several proposed secretion apparatus proteins including: Pseudomonas aeruginosa probable secretion protein Pa4142 SWALL:Q9HWN9 (EMBL:AE004831) (418 aa) fasta scores: E(): 1.4e-06%2C21.86 38d in 215 aa and to Escherichia coli microcin h47 secretion protein MchE SWALL:MCHE_ECOLI (SWALL:Q9EXN6) (424 aa) fasta scores: E(): 0.00024%2C 19.24 38d in 213 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9EXN6;product=putative exported protein;protein_id=CAL11772.1;transl_table=11
AM286415.1	EMBL	gene	1892594	1893847	.	-	.	ID=gene1682;Name=YE1698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1698
AM286415.1	EMBL	CDS	1892594	1893847	.	-	0	ID=cds1622;Parent=gene1682;Dbxref=EnsemblGenomes-Gn:YE1698,EnsemblGenomes-Tr:CAL11773,GOA:A1JNM0,InterPro:IPR000385,InterPro:IPR007197,InterPro:IPR013785,UniProtKB/TrEMBL:A1JNM0,NCBI_GP:CAL11773.1;Name=CAL11773.1;Note=Similar to many proteins of undefined function including: Streptomyces coelicolor hypothetical protein Sco5273 or 2sc7g11.35 SWALL:Q9F3J2 (EMBL:AL391763) (620 aa) fasta scores: E(): 2.6e-23%2C 25.33 38d in 375 aa and to Pasteurella multocida hypothetical protein Pm0600 SWALL:Q9CN44 (EMBL:AE006096) (377 aa) fasta scores: E(): 3.5e-18%2C 26.4 38d in 375 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL391763;product=conserved hypothetical protein;protein_id=CAL11773.1;transl_table=11
AM286415.1	EMBL	gene	1894430	1896220	.	-	.	ID=gene1683;Name=YE1699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1699
AM286415.1	EMBL	CDS	1894430	1896220	.	-	0	ID=cds1623;Parent=gene1683;Dbxref=EnsemblGenomes-Gn:YE1699,EnsemblGenomes-Tr:CAL11774,GOA:A1JNM1,InterPro:IPR000914,InterPro:IPR011991,InterPro:IPR025370,UniProtKB/TrEMBL:A1JNM1,NCBI_GP:CAL11774.1;Name=CAL11774.1;Note=Similar to Salmonella typhimurium putative dipeptide/oligopeptide/nickel ABC-type transport systems%2Cperiplasmic component stm3860 SWALL:Q8ZKX2 (EMBL:AE008880) (585 aa) fasta scores: E(): 2.2e-112%2C 61.17 38d in 595 aa%2Cand to Yersinia pestis hypothetical protein Ypo0524 ypo0524 SWALL:Q8ZIH3 (EMBL:AJ414143) (553 aa) fasta scores: E(): 1.3e-62%2C 41.34 38d in 595 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414143;product=putative ABC-transport protein%2C solute binding component;protein_id=CAL11774.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1894442	1895944	.	-	.	ID=id3155;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score -174.1%2C E-value 6.4e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	sequence_feature	1896086	1896151	.	-	.	ID=id3156;Note=Predicted helix-turn-helix motif with score 1215.000%2C SD 3.33 at aa 24-45%2C sequence ITLQELADKLSCTKRHMRTLLV;gbkey=misc_feature
AM286415.1	EMBL	gene	1896368	1897189	.	+	.	ID=gene1684;Name=YE1700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1700
AM286415.1	EMBL	CDS	1896368	1897189	.	+	0	ID=cds1624;Parent=gene1684;Dbxref=EnsemblGenomes-Gn:YE1700,EnsemblGenomes-Tr:CAL11775,GOA:A1JMD8,InterPro:IPR013708,InterPro:IPR016040,UniProtKB/TrEMBL:A1JMD8,NCBI_GP:CAL11775.1;Name=CAL11775.1;gbkey=CDS;product=putative shikimate dehydrogenase;protein_id=CAL11775.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1896443	1897135	.	+	.	ID=id3157;Note=Pfam match to entry PF01488 Shikimate_DH%2C Shikimate / quinate 5-dehydrogenase%2C score 229.8%2C E-value 2.6e-66;gbkey=misc_feature;inference=protein motif:PFAM:PF01488
AM286415.1	EMBL	gene	1897265	1897618	.	+	.	ID=gene1685;Name=YE1701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1701
AM286415.1	EMBL	CDS	1897265	1897618	.	+	0	ID=cds1625;Parent=gene1685;Dbxref=EnsemblGenomes-Gn:YE1701,EnsemblGenomes-Tr:CAL11776,GOA:A1JMD9,InterPro:IPR001310,InterPro:IPR011146,InterPro:IPR019808,UniProtKB/TrEMBL:A1JMD9,NCBI_GP:CAL11776.1;Name=CAL11776.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11776.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1897268	1897606	.	+	.	ID=id3158;Note=Pfam match to entry PF01230 HIT%2C HIT family%2C score 216.6%2C E-value 2.5e-62;gbkey=misc_feature;inference=protein motif:PFAM:PF01230
AM286415.1	EMBL	sequence_feature	1897526	1897582	.	+	.	ID=id3159;Note=PS00892 HIT family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00892
AM286415.1	EMBL	gene	1897655	1898044	.	+	.	ID=gene1686;Name=ycfL;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;locus_tag=YE1702
AM286415.1	EMBL	CDS	1897655	1898044	.	+	0	ID=cds1626;Parent=gene1686;Dbxref=EnsemblGenomes-Gn:YE1702,EnsemblGenomes-Tr:CAL11777,InterPro:IPR010824,UniProtKB/TrEMBL:A1JME1,NCBI_GP:CAL11777.1;Name=CAL11777.1;gbkey=CDS;gene=ycfL;product=putative lipoprotein;protein_id=CAL11777.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1897691	1897723	.	+	.	ID=id3160;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ycfL;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1898186	1898680	.	+	.	ID=gene1687;Name=YE1703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1703
AM286415.1	EMBL	CDS	1898186	1898680	.	+	0	ID=cds1627;Parent=gene1687;Dbxref=EnsemblGenomes-Gn:YE1703,EnsemblGenomes-Tr:CAL11778,GOA:A1JME2,InterPro:IPR014094,NCBI_GP:CAL11778.1;Name=CAL11778.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL11778.1;transl_table=11
AM286415.1	EMBL	gene	1898898	1899581	.	+	.	ID=gene1688;Name=YE1704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1704
AM286415.1	EMBL	CDS	1898898	1899581	.	+	0	ID=cds1628;Parent=gene1688;Dbxref=EnsemblGenomes-Gn:YE1704,EnsemblGenomes-Tr:CAL11779,GOA:A1JME3,InterPro:IPR002575,InterPro:IPR011009,UniProtKB/TrEMBL:A1JME3,NCBI_GP:CAL11779.1;Name=CAL11779.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11779.1;transl_table=11
AM286415.1	EMBL	gene	1899737	1900762	.	+	.	ID=gene1689;Name=ycfO;gbkey=Gene;gene=ycfO;gene_biotype=protein_coding;locus_tag=YE1705
AM286415.1	EMBL	CDS	1899737	1900762	.	+	0	ID=cds1629;Parent=gene1689;Dbxref=EnsemblGenomes-Gn:YE1705,EnsemblGenomes-Tr:CAL11780,GOA:A1JME4,InterPro:IPR001764,InterPro:IPR017853,InterPro:IPR019800,InterPro:IPR022956,NCBI_GP:CAL11780.1;Name=CAL11780.1;gbkey=CDS;gene=ycfO;product=beta-hexosaminidase;protein_id=CAL11780.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1899761	1900630	.	+	.	ID=id3161;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3 N terminal domain%2C score 265.2%2CE-value 5.7e-77;gbkey=misc_feature;gene=ycfO;inference=protein motif:PFAM:PF00933
AM286415.1	EMBL	sequence_feature	1900436	1900489	.	+	.	ID=id3162;Note=PS00775 Glycosyl hydrolases family 3 active site.;gbkey=misc_feature;gene=ycfO;inference=protein motif:Prosite:PS00775
AM286415.1	EMBL	gene	1900765	1901307	.	+	.	ID=gene1690;Name=YE1706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1706
AM286415.1	EMBL	CDS	1900765	1901307	.	+	0	ID=cds1630;Parent=gene1690;Dbxref=EnsemblGenomes-Gn:YE1706,EnsemblGenomes-Tr:CAL11781,InterPro:IPR008886,InterPro:IPR022987,InterPro:IPR029058,NCBI_GP:CAL11781.1;Name=CAL11781.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11781.1;transl_table=11
AM286415.1	EMBL	gene	1901695	1902999	.	+	.	ID=gene1691;Name=ndh;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=YE1707
AM286415.1	EMBL	CDS	1901695	1902999	.	+	0	ID=cds1631;Parent=gene1691;Dbxref=EnsemblGenomes-Gn:YE1707,EnsemblGenomes-Tr:CAL11782,GOA:A1JME6,InterPro:IPR001327,InterPro:IPR013027,InterPro:IPR023753,UniProtKB/TrEMBL:A1JME6,NCBI_GP:CAL11782.1;Name=CAL11782.1;gbkey=CDS;gene=ndh;product=NADH dehydrogenase;protein_id=CAL11782.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1901713	1902669	.	+	.	ID=id3163;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 190.1%2CE-value 2.2e-54;gbkey=misc_feature;gene=ndh;inference=protein motif:PFAM:PF00070
AM286415.1	EMBL	gene	1903698	1904237	.	+	.	ID=gene1692;Name=ycfJ;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;locus_tag=YE1708
AM286415.1	EMBL	CDS	1903698	1904237	.	+	0	ID=cds1632;Parent=gene1692;Dbxref=EnsemblGenomes-Gn:YE1708,EnsemblGenomes-Tr:CAL11783,GOA:A1JLC0,InterPro:IPR008816,UniProtKB/TrEMBL:A1JLC0,NCBI_GP:CAL11783.1;Name=CAL11783.1;gbkey=CDS;gene=ycfJ;product=putative exported protein;protein_id=CAL11783.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1903716	1903784	.	+	.	ID=id3164;Note=1 probable transmembrane helix predicted for YE1708 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=ycfJ;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1904376	1907822	.	-	.	ID=gene1693;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=YE1709
AM286415.1	EMBL	CDS	1904376	1907822	.	-	0	ID=cds1633;Parent=gene1693;Dbxref=EnsemblGenomes-Gn:YE1709,EnsemblGenomes-Tr:CAL11784,GOA:A1JLC1,InterPro:IPR001650,InterPro:IPR003711,InterPro:IPR004576,InterPro:IPR005118,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR027417,UniProtKB/TrEMBL:A1JLC1,NCBI_GP:CAL11784.1;Name=CAL11784.1;gbkey=CDS;gene=mfd;product=transcription-repair coupling factor;protein_id=CAL11784.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1904451	1904810	.	-	.	ID=id3165;Note=Pfam match to entry PF03461 TRCF%2C TRCF domain %2Cscore 186.2%2C E-value 3.3e-53;gbkey=misc_feature;gene=mfd;inference=protein motif:PFAM:PF03461
AM286415.1	EMBL	sequence_feature	1905102	1905320	.	-	.	ID=id3166;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 76.9%2C E-value 2.7e-20;gbkey=misc_feature;gene=mfd;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	1905462	1906052	.	-	.	ID=id3167;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 144.3%2C E-value 1.4e-40;gbkey=misc_feature;gene=mfd;inference=protein motif:PFAM:PF00270
AM286415.1	EMBL	sequence_feature	1905918	1905941	.	-	.	ID=id3168;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=mfd;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	1908143	1909345	.	+	.	ID=gene1694;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=YE1710
AM286415.1	EMBL	CDS	1908143	1909345	.	+	0	ID=cds1634;Parent=gene1694;Dbxref=EnsemblGenomes-Gn:YE1710,EnsemblGenomes-Tr:CAL11785,GOA:A1JLC7,InterPro:IPR003838,InterPro:IPR011925,InterPro:IPR025857,UniProtKB/TrEMBL:A1JLC7,NCBI_GP:CAL11785.1;Name=CAL11785.1;gbkey=CDS;gene=lolC;product=lipoprotein releasing system%2C transmembrane protein;protein_id=CAL11785.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1908215	1908283	.	+	.	ID=id3169;Note=4 probable transmembrane helices predicted for YE1710 by TMHMM2.0 at aa 25-47%2C 268-290%2C 311-333 and 364-386;gbkey=misc_feature;gene=lolC;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1908944	1909012	.	+	.	ID=id3169;Note=4 probable transmembrane helices predicted for YE1710 by TMHMM2.0 at aa 25-47%2C 268-290%2C 311-333 and 364-386;gbkey=misc_feature;gene=lolC;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1909073	1909141	.	+	.	ID=id3169;Note=4 probable transmembrane helices predicted for YE1710 by TMHMM2.0 at aa 25-47%2C 268-290%2C 311-333 and 364-386;gbkey=misc_feature;gene=lolC;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1909232	1909300	.	+	.	ID=id3169;Note=4 probable transmembrane helices predicted for YE1710 by TMHMM2.0 at aa 25-47%2C 268-290%2C 311-333 and 364-386;gbkey=misc_feature;gene=lolC;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	1908920	1909321	.	+	.	ID=id3170;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score 128.8%2C E-value 6.4e-36;gbkey=misc_feature;gene=lolC;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	gene	1909338	1910042	.	+	.	ID=gene1695;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=YE1711
AM286415.1	EMBL	CDS	1909338	1910042	.	+	0	ID=cds1635;Parent=gene1695;Dbxref=EnsemblGenomes-Gn:YE1711,EnsemblGenomes-Tr:CAL11786,GOA:A1JJ16,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011924,InterPro:IPR015854,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JJ16,NCBI_GP:CAL11786.1;Name=CAL11786.1;gbkey=CDS;gene=lolD;product=lipoprotein releasing system%2C ATP-binding protein;protein_id=CAL11786.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1909443	1910003	.	+	.	ID=id3171;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 211.4%2C E-value 8.7e-61;gbkey=misc_feature;gene=lolD;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1909464	1909487	.	+	.	ID=id3172;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=lolD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1909776	1909820	.	+	.	ID=id3173;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=lolD;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	1910054	1911301	.	+	.	ID=gene1696;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=YE1712
AM286415.1	EMBL	CDS	1910054	1911301	.	+	0	ID=cds1636;Parent=gene1696;Dbxref=EnsemblGenomes-Gn:YE1712,EnsemblGenomes-Tr:CAL11787,GOA:A1JJ17,InterPro:IPR003838,InterPro:IPR011925,InterPro:IPR011926,InterPro:IPR025857,UniProtKB/TrEMBL:A1JJ17,NCBI_GP:CAL11787.1;Name=CAL11787.1;gbkey=CDS;gene=lolE;product=lipoprotein releasing system%2C transmembrane protein;protein_id=CAL11787.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1910114	1910182	.	+	.	ID=id3174;Note=4 probable transmembrane helices predicted for YE1712 by TMHMM2.0 at aa 21-43%2C 271-293%2C 320-342 and 378-400;gbkey=misc_feature;gene=lolE;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1910864	1910932	.	+	.	ID=id3174;Note=4 probable transmembrane helices predicted for YE1712 by TMHMM2.0 at aa 21-43%2C 271-293%2C 320-342 and 378-400;gbkey=misc_feature;gene=lolE;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1911011	1911079	.	+	.	ID=id3174;Note=4 probable transmembrane helices predicted for YE1712 by TMHMM2.0 at aa 21-43%2C 271-293%2C 320-342 and 378-400;gbkey=misc_feature;gene=lolE;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1911185	1911253	.	+	.	ID=id3174;Note=4 probable transmembrane helices predicted for YE1712 by TMHMM2.0 at aa 21-43%2C 271-293%2C 320-342 and 378-400;gbkey=misc_feature;gene=lolE;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	1910846	1911277	.	+	.	ID=id3175;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score 169.6%2C E-value 3.4e-48;gbkey=misc_feature;gene=lolE;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	gene	1911367	1912278	.	+	.	ID=gene1697;Name=YE1713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1713
AM286415.1	EMBL	CDS	1911367	1912278	.	+	0	ID=cds1637;Parent=gene1697;Dbxref=EnsemblGenomes-Gn:YE1713,EnsemblGenomes-Tr:CAL11788,GOA:A1JL75,InterPro:IPR000600,InterPro:IPR023505,NCBI_GP:CAL11788.1;Name=CAL11788.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11788.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1911376	1911948	.	+	.	ID=id3176;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 167.8%2C E-value 1.2e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF00480
AM286415.1	EMBL	sequence_feature	1911754	1911837	.	+	.	ID=id3177;Note=PS01125 ROK family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01125
AM286415.1	EMBL	sequence_feature	1912246	1912269	.	+	.	ID=id3178;Note=PS00030 Eukaryotic putative RNA-binding region RNP-1 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00030
AM286415.1	EMBL	gene	1912439	1913275	.	+	.	ID=gene1698;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=YE1714
AM286415.1	EMBL	CDS	1912439	1913275	.	+	0	ID=cds1638;Parent=gene1698;Dbxref=EnsemblGenomes-Gn:YE1714,EnsemblGenomes-Tr:CAL11789,GOA:A1JL86,InterPro:IPR003000,InterPro:IPR026590,InterPro:IPR026591,InterPro:IPR027546,InterPro:IPR029035,UniProtKB/TrEMBL:A1JL86,NCBI_GP:CAL11789.1;Name=CAL11789.1;gbkey=CDS;gene=cobB;product=putative Sir2 family protein;protein_id=CAL11789.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1912574	1913095	.	+	.	ID=id3179;Note=Pfam match to entry PF02146 SIR2%2C Sir2 family %2Cscore 258.0%2C E-value 8.1e-75;gbkey=misc_feature;gene=cobB;inference=protein motif:PFAM:PF02146
AM286415.1	EMBL	gene	1913580	1914815	.	+	.	ID=gene1699;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=YE1715
AM286415.1	EMBL	CDS	1913580	1914815	.	+	0	ID=cds1639;Parent=gene1699;Dbxref=EnsemblGenomes-Gn:YE1715,EnsemblGenomes-Tr:CAL11790,GOA:A1JL91,InterPro:IPR001261,InterPro:IPR002933,InterPro:IPR010161,InterPro:IPR011650,UniProtKB/TrEMBL:A1JL91,NCBI_GP:CAL11790.1;Name=CAL11790.1;gbkey=CDS;gene=pepT;product=peptidase T;protein_id=CAL11790.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1913601	1914644	.	+	.	ID=id3180;Note=Pfam match to entry PF01546 Peptidase_M20%2CPeptidase family M20/M25/M40%2C score 79.8%2C E-value 3.7e-21;gbkey=misc_feature;gene=pepT;inference=protein motif:PFAM:PF01546
AM286415.1	EMBL	sequence_feature	1913691	1913723	.	+	.	ID=id3181;Note=PS00639 Eukaryotic thiol (cysteine) proteases histidine active site.;gbkey=misc_feature;gene=pepT;inference=protein motif:Prosite:PS00639
AM286415.1	EMBL	sequence_feature	1913796	1913825	.	+	.	ID=id3182;Note=PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1.;gbkey=misc_feature;gene=pepT;inference=protein motif:Prosite:PS00758
AM286415.1	EMBL	sequence_feature	1913991	1914107	.	+	.	ID=id3183;Note=PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2.;gbkey=misc_feature;gene=pepT;inference=protein motif:Prosite:PS00759
AM286415.1	EMBL	gene	1915015	1916136	.	-	.	ID=gene1700;Name=YE1716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1716
AM286415.1	EMBL	CDS	1915015	1916136	.	-	0	ID=cds1640;Parent=gene1700;Dbxref=EnsemblGenomes-Gn:YE1716,EnsemblGenomes-Tr:CAL11791,InterPro:IPR003347,UniProtKB/TrEMBL:A1JLA3,NCBI_GP:CAL11791.1;Name=CAL11791.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11791.1;transl_table=11
AM286415.1	EMBL	gene	1916221	1917675	.	-	.	ID=gene1701;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=YE1717
AM286415.1	EMBL	CDS	1916221	1917675	.	-	0	ID=cds1641;Parent=gene1701;Dbxref=EnsemblGenomes-Gn:YE1717,EnsemblGenomes-Tr:CAL11792,GOA:A1JLA6,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR015014,UniProtKB/TrEMBL:A1JLA6,NCBI_GP:CAL11792.1;Name=CAL11792.1;gbkey=CDS;gene=phoQ;product=sensor protein kinase;protein_id=CAL11792.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1916242	1916559	.	-	.	ID=id3184;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 101.9%2C E-value 7.9e-28;gbkey=misc_feature;gene=phoQ;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	1916692	1916886	.	-	.	ID=id3185;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 26.2%2C E-value 5e-05;gbkey=misc_feature;gene=phoQ;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	1916896	1917099	.	-	.	ID=id3186;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 37.0%2C E-value 2.9e-08;gbkey=misc_feature;gene=phoQ;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	1917550	1917618	.	-	.	ID=id3187;Note=2 probable transmembrane helices predicted for YE1717 by TMHMM2.0 at aa 20-42 and 191-213;gbkey=misc_feature;gene=phoQ;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1917037	1917105	.	-	.	ID=id3187;Note=2 probable transmembrane helices predicted for YE1717 by TMHMM2.0 at aa 20-42 and 191-213;gbkey=misc_feature;gene=phoQ;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	1917681	1918352	.	-	.	ID=gene1702;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=YE1718
AM286415.1	EMBL	CDS	1917681	1918352	.	-	0	ID=cds1642;Parent=gene1702;Dbxref=EnsemblGenomes-Gn:YE1718,EnsemblGenomes-Tr:CAL11793,GOA:A1JLF4,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,UniProtKB/TrEMBL:A1JLF4,NCBI_GP:CAL11793.1;Name=CAL11793.1;gbkey=CDS;gene=phoP;product=response regulator protein;protein_id=CAL11793.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1917702	1917917	.	-	.	ID=id3188;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 94.4%2C E-value 1.4e-25;gbkey=misc_feature;gene=phoP;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	sequence_feature	1917993	1918352	.	-	.	ID=id3189;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 126.8%2C E-value 2.7e-35;gbkey=misc_feature;gene=phoP;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	1918424	1919047	.	-	.	ID=gene1703;Name=YE1719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1719
AM286415.1	EMBL	CDS	1918424	1919047	.	-	0	ID=cds1643;Parent=gene1703;Dbxref=EnsemblGenomes-Gn:YE1719,EnsemblGenomes-Tr:CAL11794,GOA:A1JLF7,InterPro:IPR011250,InterPro:IPR017690,InterPro:IPR027385,UniProtKB/TrEMBL:A1JLF7,NCBI_GP:CAL11794.1;Name=CAL11794.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL11794.1;transl_table=11
AM286415.1	EMBL	gene	1919235	1920605	.	-	.	ID=gene1704;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=YE1720
AM286415.1	EMBL	CDS	1919235	1920605	.	-	0	ID=cds1644;Parent=gene1704;Dbxref=EnsemblGenomes-Gn:YE1720,EnsemblGenomes-Tr:CAL11795,GOA:A1JLG2,InterPro:IPR000362,InterPro:IPR004769,InterPro:IPR008948,InterPro:IPR013539,InterPro:IPR020557,InterPro:IPR022761,InterPro:IPR024083,UniProtKB/TrEMBL:A1JLG2,NCBI_GP:CAL11795.1;Name=CAL11795.1;gbkey=CDS;gene=purB;product=adenylosuccinate lyase;protein_id=CAL11795.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1919298	1920566	.	-	.	ID=id3190;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 410.6%2C E-value 9.4e-121;gbkey=misc_feature;gene=purB;inference=protein motif:PFAM:PF00206
AM286415.1	EMBL	sequence_feature	1919697	1919726	.	-	.	ID=id3191;Note=PS00163 Fumarate lyases signature.;gbkey=misc_feature;gene=purB;inference=protein motif:Prosite:PS00163
AM286415.1	EMBL	gene	1920631	1921257	.	-	.	ID=gene1705;Name=YE1721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1721
AM286415.1	EMBL	CDS	1920631	1921257	.	-	0	ID=cds1645;Parent=gene1705;Dbxref=EnsemblGenomes-Gn:YE1721,EnsemblGenomes-Tr:CAL11796,GOA:A1JLJ4,InterPro:IPR007451,NCBI_GP:CAL11796.1;Name=CAL11796.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11796.1;transl_table=11
AM286415.1	EMBL	gene	1921382	1922503	.	-	.	ID=gene1706;Name=trmU;gbkey=Gene;gene=trmU;gene_biotype=protein_coding;gene_synonym=asuE;locus_tag=YE1722
AM286415.1	EMBL	CDS	1921382	1922503	.	-	0	ID=cds1646;Parent=gene1706;Dbxref=EnsemblGenomes-Gn:YE1722,EnsemblGenomes-Tr:CAL11797,GOA:A1JLK6,InterPro:IPR004506,InterPro:IPR014729,InterPro:IPR023382,NCBI_GP:CAL11797.1;Name=CAL11797.1;gbkey=CDS;gene=trmU;product=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;protein_id=CAL11797.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1921421	1922485	.	-	.	ID=id3192;Note=Pfam match to entry PF03054 tRNA_Me_trans%2C tRNA methyl transferase%2C score 761.2%2C E-value 2.8e-226;gbkey=misc_feature;gene=trmU;inference=protein motif:PFAM:PF03054
AM286415.1	EMBL	sequence_feature	1921427	1921462	.	-	.	ID=id3193;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;gbkey=misc_feature;gene=trmU;inference=protein motif:Prosite:PS00070
AM286415.1	EMBL	gene	1922690	1923136	.	-	.	ID=gene1707;Name=YE1723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1723
AM286415.1	EMBL	CDS	1922690	1923136	.	-	0	ID=cds1647;Parent=gene1707;Dbxref=EnsemblGenomes-Gn:YE1723,EnsemblGenomes-Tr:CAL11798,GOA:A1JLM1,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR020476,UniProtKB/TrEMBL:A1JLM1,NCBI_GP:CAL11798.1;Name=CAL11798.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11798.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1922738	1923127	.	-	.	ID=id3194;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 90.3%2C E-value 2.6e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	sequence_feature	1922972	1923031	.	-	.	ID=id3195;Note=PS00893 mutT domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00893
AM286415.1	EMBL	gene	1923129	1923755	.	-	.	ID=gene1708;Name=ymfC;gbkey=Gene;gene=ymfC;gene_biotype=protein_coding;locus_tag=YE1724
AM286415.1	EMBL	CDS	1923129	1923755	.	-	0	ID=cds1648;Parent=gene1708;Dbxref=EnsemblGenomes-Gn:YE1724,EnsemblGenomes-Tr:CAL11799,GOA:A1JLM4,InterPro:IPR000748,InterPro:IPR006145,InterPro:IPR018496,InterPro:IPR020103,UniProtKB/TrEMBL:A1JLM4,NCBI_GP:CAL11799.1;Name=CAL11799.1;gbkey=CDS;gene=ymfC;product=putative pseudouridine synthase;protein_id=CAL11799.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1923228	1923668	.	-	.	ID=id3196;Note=Pfam match to entry PF00849 PseudoU_synth_2%2C RNA pseudouridylate synthase%2C score 81.7%2C E-value 9.6e-22;gbkey=misc_feature;gene=ymfC;inference=protein motif:PFAM:PF00849
AM286415.1	EMBL	sequence_feature	1923516	1923560	.	-	.	ID=id3197;Note=PS01149 Rsu family of pseudouridine synthase signature.;gbkey=misc_feature;gene=ymfC;inference=protein motif:Prosite:PS01149
AM286415.1	EMBL	gene	1923886	1925139	.	+	.	ID=gene1709;Name=icdA;gbkey=Gene;gene=icdA;gene_biotype=protein_coding;gene_synonym=icd,icdE;locus_tag=YE1725
AM286415.1	EMBL	CDS	1923886	1925139	.	+	0	ID=cds1649;Parent=gene1709;Dbxref=EnsemblGenomes-Gn:YE1725,EnsemblGenomes-Tr:CAL11800,GOA:A1JLN2,InterPro:IPR001804,InterPro:IPR004439,InterPro:IPR019818,InterPro:IPR024084,UniProtKB/TrEMBL:A1JLN2,NCBI_GP:CAL11800.1;Name=CAL11800.1;gbkey=CDS;gene=icdA;product=isocitrate dehydrogenase [NADP];protein_id=CAL11800.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1923970	1925124	.	+	.	ID=id3198;Note=Pfam match to entry PF00180 isodh%2CIsocitrate/isopropylmalate dehydrogenase%2C score 545.2%2CE-value 3e-161;gbkey=misc_feature;gene=icdA;inference=protein motif:PFAM:PF00180
AM286415.1	EMBL	sequence_feature	1924795	1924854	.	+	.	ID=id3199;Note=PS00470 Isocitrate and isopropylmalate dehydrogenases signature.;gbkey=misc_feature;gene=icdA;inference=protein motif:Prosite:PS00470
AM286415.1	EMBL	gene	1925672	1926532	.	+	.	ID=gene1710;Name=YE1726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1726
AM286415.1	EMBL	CDS	1925672	1926532	.	+	0	ID=cds1650;Parent=gene1710;Dbxref=EnsemblGenomes-Gn:YE1726,EnsemblGenomes-Tr:CAL11801,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:A1JLN6,NCBI_GP:CAL11801.1;Name=CAL11801.1;Note=Weakly similar in parts to Haemophilus influenzae putative glycosyl transferase Hi1696 SWALL:YG96_HAEIN (SWALL:Q48214) (294 aa) fasta scores: E(): 0.046%2C 33.33 id in 87 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q48214;product=hypothetical protein;protein_id=CAL11801.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1925732	1926241	.	+	.	ID=id3200;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 8.2%2C E-value 0.0031;gbkey=misc_feature;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	1926684	1927904	.	+	.	ID=gene1711;Name=YE1727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1727
AM286415.1	EMBL	CDS	1926684	1927904	.	+	0	ID=cds1651;Parent=gene1711;Dbxref=EnsemblGenomes-Gn:YE1727,EnsemblGenomes-Tr:CAL11802,UniProtKB/TrEMBL:A1JLN9,NCBI_GP:CAL11802.1;Name=CAL11802.1;Note=Weakly similar to Pseudomonas putida O-antigen polymerase WzY SWALL:Q9KKE4 (EMBL:AF109736) (391 aa) fasta scores: E(): 0.007%2C 24.89 38d in 241 aa and to Salmonella typhi O-antigen ligase Waal or Sty4082 SWALL:Q8Z2F8 (EMBL:AL627280) (404 aa) fasta scores: E(): 0.17%2C 22.45 id in 383 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627280;product=putative inner membrane protein;protein_id=CAL11802.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1926711	1926779	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	1926861	1926920	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	1926963	1927016	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	1927035	1927094	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	1927137	1927196	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	1927221	1927274	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	1927287	1927340	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	1927353	1927406	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	1927638	1927706	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	1927743	1927802	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	1927815	1927868	.	+	.	ID=id3201;Note=11 probable transmembrane helices predicted for YE1727 by TMHMM2.0 at aa 10-32%2C 60-79%2C 94-111%2C 118-137%2C152-171%2C 180-197%2C 202-219%2C 224-241%2C 319-341%2C 354-373 and 378-395;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	pseudogene	1928346	1928871	.	+	.	ID=gene1712;Name=YE1728;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1728;pseudo=true
AM286415.1	EMBL	CDS	1928346	1928654	.	+	0	ID=cds1652;Parent=gene1712;Note=Similar to the very N-terminus and C-terminus of many sugar permeases including: Klebsiella pneumoniae lactose permease LacY SWALL:LACY_KLEPN (SWALL:P18817) blast scores: E(): 2e-15%2C score: 84 51 38d and Enterobacter cloacae MelY SWALL:P96517 (EMBL:AB000622) blast scores: E(): 2e-19%2C score: 97 53 38d. This CDS has undergone a deletion event removing much of the central coding region;gbkey=CDS;inference=similar to sequence:UniProtKB:P18817;product=putative sugar permease (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1928659	1928871	.	+	0	ID=cds1652;Parent=gene1712;Note=Similar to the very N-terminus and C-terminus of many sugar permeases including: Klebsiella pneumoniae lactose permease LacY SWALL:LACY_KLEPN (SWALL:P18817) blast scores: E(): 2e-15%2C score: 84 51 38d and Enterobacter cloacae MelY SWALL:P96517 (EMBL:AB000622) blast scores: E(): 2e-19%2C score: 97 53 38d. This CDS has undergone a deletion event removing much of the central coding region;gbkey=CDS;inference=similar to sequence:UniProtKB:P18817;product=putative sugar permease (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1928349	1928756	.	+	.	ID=id3202;Note=Pfam match to entry PF01306 LacY_symp%2C LacY proton/sugar symporter%2C score -244.2%2C E-value 0.00033;gbkey=misc_feature;inference=protein motif:PFAM:PF01306
AM286415.1	EMBL	sequence_feature	1928373	1928441	.	+	.	ID=id3203;Note=3 probable transmembrane helices predicted for YE1728 by TMHMM2.0 at aa 10-32%2C 45-67 and 77-99;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1928478	1928546	.	+	.	ID=id3203;Note=3 probable transmembrane helices predicted for YE1728 by TMHMM2.0 at aa 10-32%2C 45-67 and 77-99;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1928574	1928642	.	+	.	ID=id3203;Note=3 probable transmembrane helices predicted for YE1728 by TMHMM2.0 at aa 10-32%2C 45-67 and 77-99;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	1928535	1928579	.	+	.	ID=id3204;Note=PS00896 LacY family proton/sugar symporters signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00896
AM286415.1	EMBL	signal_peptide	1928346	1928438	.	+	.	ID=id3205;Note=Signal peptide predicted for YE1728 by SignalP 2.0 HMM (Signal peptide probabilty 0.995) with cleavage site probability 0.402 between residues 31 and 32;gbkey=sig_peptide;pseudo=true
AM286415.1	EMBL	pseudogene	1928860	1929341	.	-	.	ID=gene1713;Name=YE1729;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1729;pseudo=true
AM286415.1	EMBL	CDS	1928994	1929341	.	-	0	ID=cds1653;Parent=gene1713;Note=This CDS appears to be a gene remnant that is similar%2C in parts%2C to many repressor proteins including: Escherichia coli sucrose operon repressor CscR SWALL:CSCR_ECOLI (SWALL:P40715) (331 aa) fasta scores: E(): 9.4e-26%2C 47.91 38d in 144 aa and to Yersinia pestis sucrose operon repressor LacI-family Ypo1642 SWALL:Q8ZFQ1 (EMBL:AJ414149) (347 aa) fasta scores: E(): 4.3e-48%2C 85.4 id in 137 aa. This CDS carries a framshift mutation and has undergone deletion event.;gbkey=CDS;inference=similar to sequence:UniProtKB:P40715;product=putative transcriptional regulatory protein (partial);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1928860	1928994	.	-	0	ID=cds1653;Parent=gene1713;Note=This CDS appears to be a gene remnant that is similar%2C in parts%2C to many repressor proteins including: Escherichia coli sucrose operon repressor CscR SWALL:CSCR_ECOLI (SWALL:P40715) (331 aa) fasta scores: E(): 9.4e-26%2C 47.91 38d in 144 aa and to Yersinia pestis sucrose operon repressor LacI-family Ypo1642 SWALL:Q8ZFQ1 (EMBL:AJ414149) (347 aa) fasta scores: E(): 4.3e-48%2C 85.4 id in 137 aa. This CDS carries a framshift mutation and has undergone deletion event.;gbkey=CDS;inference=similar to sequence:UniProtKB:P40715;product=putative transcriptional regulatory protein (partial);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1928985	1929284	.	-	.	ID=id3206;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 54.0%2C E-value 7.9e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	sequence_feature	1929261	1929341	.	-	.	ID=id3207;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 41.7%2C E-value 1.1e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	1929273	1929338	.	-	.	ID=id3208;Note=Predicted helix-turn-helix motif with score 1620.000%2C SD 4.70 at aa 2-23%2C sequence ASLKEVANLASVSLMTVSRAIN;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1929276	1929332	.	-	.	ID=id3209;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	gene	1929451	1929711	.	-	.	ID=gene1714;Name=YE1730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1730
AM286415.1	EMBL	CDS	1929451	1929711	.	-	0	ID=cds1654;Parent=gene1714;Dbxref=EnsemblGenomes-Gn:YE1730,EnsemblGenomes-Tr:CAL11805,UniProtKB/TrEMBL:A1JLQ2,NCBI_GP:CAL11805.1;Name=CAL11805.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11805.1;transl_table=11
AM286415.1	EMBL	gene	1929885	1931444	.	-	.	ID=gene1715;Name=aer;gbkey=Gene;gene=aer;gene_biotype=protein_coding;gene_synonym=air;locus_tag=YE1731
AM286415.1	EMBL	CDS	1929885	1931444	.	-	0	ID=cds1655;Parent=gene1715;Dbxref=EnsemblGenomes-Gn:YE1731,EnsemblGenomes-Tr:CAL11806,GOA:A1JLQ5,InterPro:IPR000014,InterPro:IPR001610,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,UniProtKB/TrEMBL:A1JLQ5,NCBI_GP:CAL11806.1;Name=CAL11806.1;gbkey=CDS;gene=aer;product=putative methyl-accepting chemotaxis protein;protein_id=CAL11806.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1929891	1930589	.	-	.	ID=id3210;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 265.7%2C E-value 3.9e-77;gbkey=misc_feature;gene=aer;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	sequence_feature	1930650	1930859	.	-	.	ID=id3211;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 43.4%2C E-value 3.4e-10;gbkey=misc_feature;gene=aer;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	1930860	1930928	.	-	.	ID=id3212;Note=1 probable transmembrane helix predicted for YE1731 by TMHMM2.0 at aa 173-195;gbkey=misc_feature;gene=aer;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1931082	1931207	.	-	.	ID=id3213;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 20.8%2C E-value 0.0022;gbkey=misc_feature;gene=aer;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1931226	1931375	.	-	.	ID=id3214;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 25.4%2C E-value 1.3e-06;gbkey=misc_feature;gene=aer;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	gene	1932015	1933283	.	-	.	ID=gene1716;Name=umuC;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=YE1732
AM286415.1	EMBL	CDS	1932015	1933283	.	-	0	ID=cds1656;Parent=gene1716;Dbxref=EnsemblGenomes-Gn:YE1732,EnsemblGenomes-Tr:CAL11807,GOA:A1JLQ9,InterPro:IPR001126,InterPro:IPR017961,InterPro:IPR017963,InterPro:IPR024728,InterPro:IPR025188,UniProtKB/TrEMBL:A1JLQ9,NCBI_GP:CAL11807.1;Name=CAL11807.1;Note=Similar to Escherichia coli uv protection and mutation protein UmuC or b1184 SWALL:UMUC_ECOLI (SWALL:P04152) (422 aa) fasta scores: E(): 7e-106%2C 64.02 id in 417 aa and to Salmonella typhimurium UmuC protein or stm1997 SWALL:UMUC_SALTY (SWALL:P22494) (422 aa) fasta scores: E(): 1.8e-106%2C 65.22 38d in 417 aa;gbkey=CDS;gene=umuC;inference=similar to sequence:UniProtKB:P22494;product=putative uv protection and mutation protein;protein_id=CAL11807.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1932231	1933271	.	-	.	ID=id3215;Note=Pfam match to entry PF00817 IMS%2C impB/mucB/samB family%2C score 476.5%2C E-value 1.4e-140;gbkey=misc_feature;gene=umuC;inference=protein motif:PFAM:PF00817
AM286415.1	EMBL	gene	1933283	1933696	.	-	.	ID=gene1717;Name=umuD;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=YE1733
AM286415.1	EMBL	CDS	1933283	1933696	.	-	0	ID=cds1657;Parent=gene1717;Dbxref=EnsemblGenomes-Gn:YE1733,EnsemblGenomes-Tr:CAL11808,GOA:A1JLR5,InterPro:IPR015927,InterPro:IPR019759,InterPro:IPR028360,UniProtKB/TrEMBL:A1JLR5,NCBI_GP:CAL11808.1;Name=CAL11808.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 uv protection and mutation protein UmuD protein or b1183 or z1946 or ecs1678 SWALL:UMUD_ECOLI (SWALL:P04153) (139 aa) fasta scores: E(): 7e-17%2C 40.9 38d in 132 aa%2CEscherichia coli%2C and Providencia rettgeri RumA(r391) SWALL:Q44053 (EMBL:U13633) (149 aa) fasta scores: E(): 8.2e-18%2C 48.71 38d in 117 aa%2C and to Salmonella typhimurium protein UmuDor stm1998 SWALL:UMUD_SALTY (SWALL:P22493) (139 aa) fasta scores: E(): 1.4e-17%2C 50.38 id in 129 aa;gbkey=CDS;gene=umuD;inference=similar to sequence:UniProtKB:P22493;product=putative uv protection and mutation protein;protein_id=CAL11808.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1933334	1933636	.	-	.	ID=id3216;Note=Pfam match to entry PF00717 Peptidase_S24%2CPeptidase family S24%2C score 100.2%2C E-value 2.6e-27;gbkey=misc_feature;gene=umuD;inference=protein motif:PFAM:PF00717
AM286415.1	EMBL	sequence_feature	1933490	1933522	.	-	.	ID=id3217;Note=PS00626 Regulator of chromosome condensation (RCC1) signature 2.;gbkey=misc_feature;gene=umuD;inference=protein motif:Prosite:PS00626
AM286415.1	EMBL	repeat_region	1934201	1935503	.	+	.	ID=id3218;Note=Insertion sequence element IS1669;gbkey=repeat_region
AM286415.1	EMBL	gene	1934339	1934653	.	+	.	ID=gene1718;Name=YE1735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1735
AM286415.1	EMBL	CDS	1934339	1934653	.	+	0	ID=cds1658;Parent=gene1718;Dbxref=EnsemblGenomes-Gn:YE1735,EnsemblGenomes-Tr:CAL11809,GOA:A1JIJ8,InterPro:IPR009057,UniProtKB/TrEMBL:A1JIJ8,NCBI_GP:CAL11809.1;Name=CAL11809.1;Note=Similar to several including: Yersinia pestis hypothetical protein Ypo2009A SWALL:Q8ZEY6 (EMBL:AJ414151) (104 aa) fasta scores: E(): 7e-31%2C 87.5 38d in 104 aa%2C and in part to Salmonella typhimurium putative cytoplasmic protein Stm0948 SWALL:Q8ZQE1 (EMBL:AE008740) (133 aa) fasta scores: E(): 3.9e-16%2C 53 38d in 100 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=IS1669 hypothetical protein;protein_id=CAL11809.1;transl_table=11
AM286415.1	EMBL	gene	1934671	1935468	.	+	.	ID=gene1719;Name=YE1736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1736
AM286415.1	EMBL	CDS	1934671	1935468	.	+	0	ID=cds1659;Parent=gene1719;Dbxref=EnsemblGenomes-Gn:YE1736,EnsemblGenomes-Tr:CAL11810,GOA:A1JIJ9,InterPro:IPR001584,InterPro:IPR012337,UniProtKB/TrEMBL:A1JIJ9,NCBI_GP:CAL11810.1;Name=CAL11810.1;Note=Similar to Shigella sonnei insertion element IS600 hypothetical protein SWALL:YIS2_SHISO (SWALL:P16940) (272 aa) fasta scores: E(): 5.9e-25%2C 37.4 38d in 270 aa%2CPseudomonas aeruginosa hypothetical protein Pa0257 SWALL:Q9I6N2 (EMBL:AE004463) (263 aa) fasta scores: E(): 8.6e-70%2C 66.16 38d in 263 aa and to Porphyromonas gingivalis transposase Orf2 SWALL:Q9L796 (EMBL:AF224744) (312 aa) fasta scores: E(): 9.8e-27%2C 37.26 38d in 271 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P16940;product=putative transposase for insertion element IS1669;protein_id=CAL11810.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1934983	1935459	.	+	.	ID=id3219;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 121.4%2C E-value 1.1e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	pseudogene	1935748	1935783	.	+	.	ID=gene1720;Name=YE1737;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE1737;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	1935786	1936007	.	+	.	ID=gene1720;Name=YE1737;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE1737;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	1935748	1935783	.	+	0	ID=cds1660;Parent=gene1720;Dbxref=PSEUDO:CAL11811.1;Note=Similar to many including: Emericella nidulans O-acetylhomoserine synthase CysD SWALL:CYSD_EMENI (SWALL:P50125) (437 aa) fasta scores: E(): 5e-12%2C 49.39 id in 83 aa%2C Pseudomonas aeruginosa homocysteine synthase MetY or pa5025 SWALL:Q9HUE4 (EMBL:AE004915) (425 aa) fasta scores: E(): 1.9e-22%2C 82.14 38d in 84 aa and Xanthomonas campestris homocysteine synthase MetB or xcc3068 SWALL:AAM42339 (EMBL:AE012421) (428 aa) fasta scores: E(): 5.7e-18%2C 70.23 38d in 84 aa. This CDS lacks the N-terminal ~~340 aa when compared to its orthologues. This is thought to have resulted from the insertion of the adjacent IS1669 element.;gbkey=CDS;inference=similar to sequence:UniProtKB:P50125;product=possible homoserine synthase;pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	1935786	1936007	.	+	0	ID=cds1660;Parent=gene1720;Dbxref=PSEUDO:CAL11811.1;Note=Similar to many including: Emericella nidulans O-acetylhomoserine synthase CysD SWALL:CYSD_EMENI (SWALL:P50125) (437 aa) fasta scores: E(): 5e-12%2C 49.39 id in 83 aa%2C Pseudomonas aeruginosa homocysteine synthase MetY or pa5025 SWALL:Q9HUE4 (EMBL:AE004915) (425 aa) fasta scores: E(): 1.9e-22%2C 82.14 38d in 84 aa and Xanthomonas campestris homocysteine synthase MetB or xcc3068 SWALL:AAM42339 (EMBL:AE012421) (428 aa) fasta scores: E(): 5.7e-18%2C 70.23 38d in 84 aa. This CDS lacks the N-terminal ~~340 aa when compared to its orthologues. This is thought to have resulted from the insertion of the adjacent IS1669 element.;gbkey=CDS;inference=similar to sequence:UniProtKB:P50125;product=possible homoserine synthase;pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	1935807	1935992	.	+	.	ID=id3220;Note=Pfam match to entry PF01053 Cys_Met_Meta_PP%2CCys/Met metabolism PLP-dependent enzyme%2C score 84.9%2CE-value 1.4e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF01053
AM286415.1	EMBL	gene	1936070	1936927	.	-	.	ID=gene1721;Name=YE1738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1738
AM286415.1	EMBL	CDS	1936070	1936927	.	-	0	ID=cds1661;Parent=gene1721;Dbxref=EnsemblGenomes-Gn:YE1738,EnsemblGenomes-Tr:CAL11812,InterPro:IPR008030,InterPro:IPR016040,UniProtKB/TrEMBL:A1JLU4,NCBI_GP:CAL11812.1;Name=CAL11812.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11812.1;transl_table=11
AM286415.1	EMBL	gene	1937261	1937602	.	+	.	ID=gene1722;Name=YE1739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1739
AM286415.1	EMBL	CDS	1937261	1937602	.	+	0	ID=cds1662;Parent=gene1722;Dbxref=EnsemblGenomes-Gn:YE1739,EnsemblGenomes-Tr:CAL11813,InterPro:IPR002577,InterPro:IPR011991,UniProtKB/TrEMBL:A1JLU6,NCBI_GP:CAL11813.1;Name=CAL11813.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11813.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1937300	1937572	.	+	.	ID=id3221;Note=Pfam match to entry PF01638 DUF24%2C Transcriptional regulator%2C score 123.6%2C E-value 2.4e-34;gbkey=misc_feature;inference=protein motif:PFAM:PF01638
AM286415.1	EMBL	gene	1937666	1937950	.	-	.	ID=gene1723;Name=YE1740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1740
AM286415.1	EMBL	CDS	1937666	1937950	.	-	0	ID=cds1663;Parent=gene1723;Dbxref=EnsemblGenomes-Gn:YE1740,EnsemblGenomes-Tr:CAL11814,InterPro:IPR005545,InterPro:IPR011008,UniProtKB/TrEMBL:A1JLV0,NCBI_GP:CAL11814.1;Name=CAL11814.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11814.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1937702	1937932	.	-	.	ID=id3222;Note=Pfam match to entry PF03795 YCII%2C YCII-related domain%2C score 59.9%2C E-value 3.5e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF03795
AM286415.1	EMBL	gene	1938628	1939542	.	-	.	ID=gene1724;Name=YE1742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1742
AM286415.1	EMBL	CDS	1938628	1939542	.	-	0	ID=cds1664;Parent=gene1724;Dbxref=EnsemblGenomes-Gn:YE1742,EnsemblGenomes-Tr:CAL11815,GOA:A1JLV4,InterPro:IPR000620,UniProtKB/TrEMBL:A1JLV4,NCBI_GP:CAL11815.1;Name=CAL11815.1;Note=Similar to many proteins of undefined function including: Pseudomonas aeruginosa hypothetical protein Pa3897 SWALL:Q9HXB6 (EMBL:AE004807) (300 aa) fasta scores: E(): 4.2e-52%2C 50.86 38d in 289 aa and Bacillus subtilis hypothetical transport protein YoaV SWALL:YOAV_BACSU (SWALL:O34416) (292 aa) fasta scores: E(): 7.5e-10%2C 23.42 id in 286 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:O34416;product=putative inner membrane protein;protein_id=CAL11815.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1938682	1939062	.	-	.	ID=id3223;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 51.3%2C E-value 1.4e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	1939483	1939536	.	-	.	ID=id3224;Note=10 probable transmembrane helices predicted for YE1742 by TMHMM2.0 at aa 3-20%2C 30-52%2C 64-86%2C 90-112%2C119-136%2C 151-170%2C 177-199%2C 214-236%2C 243-262 and 267-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	1939387	1939455	.	-	.	ID=id3224;Note=10 probable transmembrane helices predicted for YE1742 by TMHMM2.0 at aa 3-20%2C 30-52%2C 64-86%2C 90-112%2C119-136%2C 151-170%2C 177-199%2C 214-236%2C 243-262 and 267-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	1939285	1939353	.	-	.	ID=id3224;Note=10 probable transmembrane helices predicted for YE1742 by TMHMM2.0 at aa 3-20%2C 30-52%2C 64-86%2C 90-112%2C119-136%2C 151-170%2C 177-199%2C 214-236%2C 243-262 and 267-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	1939207	1939275	.	-	.	ID=id3224;Note=10 probable transmembrane helices predicted for YE1742 by TMHMM2.0 at aa 3-20%2C 30-52%2C 64-86%2C 90-112%2C119-136%2C 151-170%2C 177-199%2C 214-236%2C 243-262 and 267-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	1939135	1939188	.	-	.	ID=id3224;Note=10 probable transmembrane helices predicted for YE1742 by TMHMM2.0 at aa 3-20%2C 30-52%2C 64-86%2C 90-112%2C119-136%2C 151-170%2C 177-199%2C 214-236%2C 243-262 and 267-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	1939033	1939092	.	-	.	ID=id3224;Note=10 probable transmembrane helices predicted for YE1742 by TMHMM2.0 at aa 3-20%2C 30-52%2C 64-86%2C 90-112%2C119-136%2C 151-170%2C 177-199%2C 214-236%2C 243-262 and 267-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	1938946	1939014	.	-	.	ID=id3224;Note=10 probable transmembrane helices predicted for YE1742 by TMHMM2.0 at aa 3-20%2C 30-52%2C 64-86%2C 90-112%2C119-136%2C 151-170%2C 177-199%2C 214-236%2C 243-262 and 267-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	1938835	1938903	.	-	.	ID=id3224;Note=10 probable transmembrane helices predicted for YE1742 by TMHMM2.0 at aa 3-20%2C 30-52%2C 64-86%2C 90-112%2C119-136%2C 151-170%2C 177-199%2C 214-236%2C 243-262 and 267-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	1938757	1938816	.	-	.	ID=id3224;Note=10 probable transmembrane helices predicted for YE1742 by TMHMM2.0 at aa 3-20%2C 30-52%2C 64-86%2C 90-112%2C119-136%2C 151-170%2C 177-199%2C 214-236%2C 243-262 and 267-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	1938685	1938744	.	-	.	ID=id3224;Note=10 probable transmembrane helices predicted for YE1742 by TMHMM2.0 at aa 3-20%2C 30-52%2C 64-86%2C 90-112%2C119-136%2C 151-170%2C 177-199%2C 214-236%2C 243-262 and 267-286;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	1939135	1939512	.	-	.	ID=id3225;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 31.9%2C E-value 9.4e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	1939494	1940600	.	+	.	ID=gene1725;Name=YE1743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1743
AM286415.1	EMBL	CDS	1939494	1940600	.	+	0	ID=cds1665;Parent=gene1725;Dbxref=EnsemblGenomes-Gn:YE1743,EnsemblGenomes-Tr:CAL11816,GOA:A1JLW0,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR020449,UniProtKB/TrEMBL:A1JLW0,NCBI_GP:CAL11816.1;Name=CAL11816.1;Note=Similar to many proposed regulatory proteins including: Pantoea citrea regulatory protein GdhbR SWALL:Q9Z676 (EMBL:AF102513) (288 aa) fasta scores: E(): 1.5e-71%2C 59.44 38d in 286 aa%2C Pseudomonas aeruginosa probable transcriptional regulator Pa3898 SWALL:Q9HXB5 (EMBL:AE004807) (293 aa) fasta scores: E(): 6.3e-40%2C42.75 38d in 290 aa and Burkholderia pseudomallei probable transcriptional regulator SWALL:Q93SM6 (EMBL:AY032866) (362 aa) fasta scores: E(): 2.6e-32%2C 34.52 38d in 281 aa. Note it is possible that the true translational start site for the CDS lies at codon 73.;gbkey=CDS;inference=similar to sequence:INSDC:AY032866;product=putative AraC-family transcriptional regulatory protein;protein_id=CAL11816.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1940301	1940438	.	+	.	ID=id3226;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 50.9%2C E-value 1.8e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	1940337	1940402	.	+	.	ID=id3227;Note=Predicted helix-turn-helix motif with score 1254.000%2C SD 3.46 at aa 282-303%2C sequence LLLSDLAEQAGLSEFHFARMFK;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	1940457	1940588	.	+	.	ID=id3228;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 37.0%2C E-value 2.8e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	1940624	1941013	.	-	.	ID=gene1726;Name=YE1744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1744
AM286415.1	EMBL	CDS	1940624	1941013	.	-	0	ID=cds1666;Parent=gene1726;Dbxref=EnsemblGenomes-Gn:YE1744,EnsemblGenomes-Tr:CAL11817,InterPro:IPR009739,UniProtKB/TrEMBL:A1JLW7,NCBI_GP:CAL11817.1;Name=CAL11817.1;Note=Similar to many including: Salmonella typhimurium putative periplasmic protein Stm1123 SWALL:Q8ZQ37 (EMBL:AE008748) (131 aa) fasta scores: E(): 1.2e-23%2C53.96 38d in 126 aa%2C Salmonella typhi putative secreted protein Sty1158 SWALL:Q8Z7N6 (EMBL:AL627269) (131 aa) fasta scores: E(): 2.2e-23%2C 53.17 38d in 126 aa and Rhizobium meliloti hypothetical protein R02472 or smc02046 SWALL:YO72_RHIME (SWALL:P42879) (139 aa) fasta scores: E(): 1.3e-05%2C 39.82 38d in 113 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P42879;product=putative exported protein;protein_id=CAL11817.1;transl_table=11
AM286415.1	EMBL	gene	1941092	1941403	.	-	.	ID=gene1727;Name=YE1745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1745
AM286415.1	EMBL	CDS	1941092	1941403	.	-	0	ID=cds1667;Parent=gene1727;Dbxref=EnsemblGenomes-Gn:YE1745,EnsemblGenomes-Tr:CAL11818,GOA:A1JLX4,InterPro:IPR010486,InterPro:IPR028623,UniProtKB/TrEMBL:A1JLX4,NCBI_GP:CAL11818.1;Name=CAL11818.1;Note=Similar to Yersinia pestis putative exported protein Ypo2674 SWALL:Q8ZDB4 (EMBL:AJ414153) (109 aa) fasta scores: E(): 6.8e-23%2C 59.43 38d in 106 aa and to Escherichia coli protein HdeB precursor or b3509 SWALL:HDEB_ECOLI (SWALL:P26605) (108 aa) fasta scores: E(): 2e-13%2C 49.41 38d in 85 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P26605;product=putative exported protein;protein_id=CAL11818.1;transl_table=11
AM286415.1	EMBL	gene	1941674	1941934	.	-	.	ID=gene1728;Name=YE1745A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1745A
AM286415.1	EMBL	CDS	1941674	1941934	.	-	0	ID=cds1668;Parent=gene1728;Dbxref=EnsemblGenomes-Gn:YE1745A,EnsemblGenomes-Tr:CCP19177,UniProtKB/TrEMBL:K8FBH2,NCBI_GP:CCP19177.1;Name=CCP19177.1;Note=no known homologs;gbkey=CDS;product=hypothetical exported protein;protein_id=CCP19177.1;transl_table=11
AM286415.1	EMBL	gene	1942268	1943590	.	+	.	ID=gene1729;Name=YE1746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1746
AM286415.1	EMBL	CDS	1942268	1943590	.	+	0	ID=cds1669;Parent=gene1729;Dbxref=EnsemblGenomes-Gn:YE1746,EnsemblGenomes-Tr:CAL11819,GOA:A1JLX9,InterPro:IPR000014,InterPro:IPR000160,InterPro:IPR000700,InterPro:IPR001610,InterPro:IPR013655,InterPro:IPR029787,UniProtKB/TrEMBL:A1JLX9,NCBI_GP:CAL11819.1;Name=CAL11819.1;Note=Similar in the C-terminus only to the regions within proteins thought to constitute part of a sensor transduction system%2C including: Synechocystis sp. regulatory components of sensory transduction system sll1673 SWALL:P72790 (EMBL:D90900) (452 aa) fasta scores: E(): 3.5e-22%2C 38.11 38d in 265 aa%2C and to Vibrio cholerae sensory box/ggdef family protein vc2370 SWALL:Q9KPJ7 (EMBL:AE004307) (579 aa) fasta scores: E(): 2.6e-20%2C28.85 38d in 357 aa;gbkey=CDS;inference=similar to sequence:INSDC:D90900;product=hypothetical protein;protein_id=CAL11819.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1942343	1942504	.	+	.	ID=id3229;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 20.7%2C E-value 2.6e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	1942520	1942648	.	+	.	ID=id3230;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 41.0%2C E-value 1.7e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1942925	1943050	.	+	.	ID=id3231;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 9.6%2C E-value 0.28;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1943069	1943566	.	+	.	ID=id3232;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 225.8%2C E-value 4e-65;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	gene	1943804	1944652	.	-	.	ID=gene1730;Name=YE1747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1747
AM286415.1	EMBL	CDS	1943804	1944652	.	-	0	ID=cds1670;Parent=gene1730;Dbxref=EnsemblGenomes-Gn:YE1747,EnsemblGenomes-Tr:CAL11820,GOA:A1JLY5,InterPro:IPR011009,InterPro:IPR018934,InterPro:IPR018935,UniProtKB/TrEMBL:A1JLY5,NCBI_GP:CAL11820.1;Name=CAL11820.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11820.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1943942	1944565	.	-	.	ID=id3233;Note=Pfam match to entry PF01163 RIO1%2CRIO1/ZK632.3/MJ0444 family%2C score 14.9%2C E-value 3.6e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF01163
AM286415.1	EMBL	sequence_feature	1944125	1944163	.	-	.	ID=id3234;Note=PS00109 Tyrosine protein kinases specific active-site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00109
AM286415.1	EMBL	sequence_feature	1944128	1944163	.	-	.	ID=id3235;Note=PS01245 RIO1/ZK632.3/MJ0444 family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01245
AM286415.1	EMBL	gene	1944755	1946473	.	-	.	ID=gene1731;Name=YE1748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1748
AM286415.1	EMBL	CDS	1944755	1946473	.	-	0	ID=cds1671;Parent=gene1731;Dbxref=EnsemblGenomes-Gn:YE1748,EnsemblGenomes-Tr:CAL11821,GOA:A1JLZ1,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JLZ1,NCBI_GP:CAL11821.1;Name=CAL11821.1;gbkey=CDS;product=putative ABC transporter (ATP-binding protein);protein_id=CAL11821.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1944845	1945399	.	-	.	ID=id3236;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 221.9%2C E-value 6.2e-64;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	1945022	1945066	.	-	.	ID=id3237;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	1945355	1945378	.	-	.	ID=id3238;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1945613	1946428	.	-	.	ID=id3239;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 173.1%2C E-value 3e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	1946363	1946431	.	-	.	ID=id3240;Note=4 probable transmembrane helices predicted for YE1748 by TMHMM2.0 at aa 15-37%2C 50-72%2C 142-164 and 245-264;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	1946258	1946326	.	-	.	ID=id3240;Note=4 probable transmembrane helices predicted for YE1748 by TMHMM2.0 at aa 15-37%2C 50-72%2C 142-164 and 245-264;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	1945982	1946050	.	-	.	ID=id3240;Note=4 probable transmembrane helices predicted for YE1748 by TMHMM2.0 at aa 15-37%2C 50-72%2C 142-164 and 245-264;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	1945682	1945741	.	-	.	ID=id3240;Note=4 probable transmembrane helices predicted for YE1748 by TMHMM2.0 at aa 15-37%2C 50-72%2C 142-164 and 245-264;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	1946673	1947092	.	+	.	ID=gene1732;Name=YE1749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1749
AM286415.1	EMBL	CDS	1946673	1947092	.	+	0	ID=cds1672;Parent=gene1732;Dbxref=EnsemblGenomes-Gn:YE1749,EnsemblGenomes-Tr:CAL11822,GOA:A1JLZ8,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JLZ8,NCBI_GP:CAL11822.1;Name=CAL11822.1;Note=Similar to many including: Pantoea agglomerans hypothetical protein SWALL:Q937I1 (EMBL:X99768) (149 aa) fasta scores: E(): 1.1e-20%2C 47.4 38d in 135 aa%2C Salmonella typhimurium putative acetyltransferase Stm1857 SWALL:Q8ZNY6 (EMBL:AE008782) (139 aa) fasta scores: E(): 3.5e-17%2C 42.64 38d in 136 aa and Salmonella typhi putative acetyltransferase Sty1991 SWALL:Q8Z655 (EMBL:AL627272) (139 aa) fasta scores: E(): 9.4e-16%2C 41.17 38d in 136 aa;gbkey=CDS;inference=similar to sequence:INSDC:X99768;product=putative acetyltransferase;protein_id=CAL11822.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1946790	1947020	.	+	.	ID=id3241;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 62.1%2C E-value 7.7e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	1947359	1948861	.	+	.	ID=gene1733;Name=YE1750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1750
AM286415.1	EMBL	CDS	1947359	1948861	.	+	0	ID=cds1673;Parent=gene1733;Dbxref=EnsemblGenomes-Gn:YE1750,EnsemblGenomes-Tr:CAL11823,GOA:A1JM03,InterPro:IPR002293,UniProtKB/TrEMBL:A1JM03,NCBI_GP:CAL11823.1;Name=CAL11823.1;Note=Similar to many arginine/ornithine antiporters including: Clostridium perfringens ArcD or cpe0170 SWALL:ARCD_CLOPE (SWALL:Q46170) (478 aa) fasta scores: E(): 8.2e-41%2C 45.23 38d in 504 aa and Rhizobium meliloti probable arginine/ornithine antiporter ArcD1 or ra0913 or sma1667 SWALL:Q92YG7 (EMBL:AE007277) (475 aa) fasta scores: E(): 7.8e-59%2C 59.35 38d in 497 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q46170;product=probable amino acid permease;protein_id=CAL11823.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1947371	1948750	.	+	.	ID=id3242;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -266.3%2C E-value 0.0049;gbkey=misc_feature;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	1947473	1947541	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1947620	1947688	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1947731	1947790	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1947827	1947895	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1948028	1948096	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1948133	1948201	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1948259	1948327	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1948418	1948486	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1948499	1948567	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1948625	1948678	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1948688	1948741	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1948787	1948855	.	+	.	ID=id3243;Note=12 probable transmembrane helices predicted for YE1750 by TMHMM2.0 at aa 39-61%2C 88-110%2C 125-144%2C 157-179%2C224-246%2C 259-281%2C 301-323%2C 354-376%2C 381-403%2C 423-440%2C444-461 and 477-499;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	1949296	1949460	.	+	.	ID=gene1734;Name=YE1752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1752
AM286415.1	EMBL	CDS	1949296	1949460	.	+	0	ID=cds1674;Parent=gene1734;Dbxref=EnsemblGenomes-Gn:YE1752,EnsemblGenomes-Tr:CAL11824,UniProtKB/TrEMBL:A1JM16,NCBI_GP:CAL11824.1;Name=CAL11824.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11824.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1949326	1949394	.	+	.	ID=id3244;Note=1 probable transmembrane helix predicted for YE1752 by TMHMM2.0 at aa 11-33;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1949519	1949905	.	-	.	ID=gene1735;Name=YE1753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1753
AM286415.1	EMBL	CDS	1949519	1949905	.	-	0	ID=cds1675;Parent=gene1735;Dbxref=EnsemblGenomes-Gn:YE1753,EnsemblGenomes-Tr:CAL11825,GOA:A1JM24,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR020449,UniProtKB/TrEMBL:A1JM24,NCBI_GP:CAL11825.1;Name=CAL11825.1;gbkey=CDS;product=AraC-family transcriptional regulatory protein;protein_id=CAL11825.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1949582	1949713	.	-	.	ID=id3245;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 47.9%2C E-value 1.5e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	1949597	1949725	.	-	.	ID=id3246;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	1949732	1949869	.	-	.	ID=id3247;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 34.4%2C E-value 1.7e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	1950571	1950810	.	+	.	ID=gene1736;Name=YE1756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1756
AM286415.1	EMBL	CDS	1950571	1950810	.	+	0	ID=cds1676;Parent=gene1736;Dbxref=EnsemblGenomes-Gn:YE1756,EnsemblGenomes-Tr:CAL11826,InterPro:IPR020262,UniProtKB/TrEMBL:A1JM32,NCBI_GP:CAL11826.1;Name=CAL11826.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11826.1;transl_table=11
AM286415.1	EMBL	gene	1950903	1951115	.	-	.	ID=gene1737;Name=YE1757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1757
AM286415.1	EMBL	CDS	1950903	1951115	.	-	0	ID=cds1677;Parent=gene1737;Dbxref=EnsemblGenomes-Gn:YE1757,EnsemblGenomes-Tr:CAL11827,InterPro:IPR025611,UniProtKB/TrEMBL:A1JM33,NCBI_GP:CAL11827.1;Name=CAL11827.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11827.1;transl_table=11
AM286415.1	EMBL	gene	1951825	1952100	.	+	.	ID=gene1738;Name=YE1758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1758
AM286415.1	EMBL	CDS	1951825	1952100	.	+	0	ID=cds1678;Parent=gene1738;Dbxref=EnsemblGenomes-Gn:YE1758,EnsemblGenomes-Tr:CAL11828,InterPro:IPR025594,UniProtKB/TrEMBL:A1JM36,NCBI_GP:CAL11828.1;Name=CAL11828.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11828.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1951852	1951920	.	+	.	ID=id3248;Note=1 probable transmembrane helix predicted for YE1758 by TMHMM2.0 at aa 10-32;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	1952302	1952601	.	+	.	ID=gene1739;Name=YE1759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1759
AM286415.1	EMBL	CDS	1952302	1952601	.	+	0	ID=cds1679;Parent=gene1739;Dbxref=EnsemblGenomes-Gn:YE1759,EnsemblGenomes-Tr:CAL11829,InterPro:IPR019701,UniProtKB/TrEMBL:A1JM39,NCBI_GP:CAL11829.1;Name=CAL11829.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11829.1;transl_table=11
AM286415.1	EMBL	gene	1952684	1952953	.	+	.	ID=gene1740;Name=YE1760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1760
AM286415.1	EMBL	CDS	1952684	1952953	.	+	0	ID=cds1680;Parent=gene1740;Dbxref=EnsemblGenomes-Gn:YE1760,EnsemblGenomes-Tr:CAL11830,InterPro:IPR025135,UniProtKB/TrEMBL:A1JM41,NCBI_GP:CAL11830.1;Name=CAL11830.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11830.1;transl_table=11
AM286415.1	EMBL	gene	1953145	1954536	.	+	.	ID=gene1741;Name=aroP;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=YE1761
AM286415.1	EMBL	CDS	1953145	1954536	.	+	0	ID=cds1681;Parent=gene1741;Dbxref=EnsemblGenomes-Gn:YE1761,EnsemblGenomes-Tr:CAL11831,GOA:A1JM42,InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB/TrEMBL:A1JM42,NCBI_GP:CAL11831.1;Name=CAL11831.1;gbkey=CDS;gene=aroP;product=aromatic amino acid transport protein;protein_id=CAL11831.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1953172	1954488	.	+	.	ID=id3249;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 689.1%2C E-value 1.4e-204;gbkey=misc_feature;gene=aroP;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	1953205	1953264	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	1953274	1953327	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	1953427	1953495	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	1953523	1953579	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	1953598	1953666	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	1953724	1953792	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	1953862	1953930	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	1953988	1954056	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	1954135	1954203	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	1954213	1954281	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	1954339	1954407	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	1954417	1954476	.	+	.	ID=id3250;Note=12 probable transmembrane helices predicted for YE1761 by TMHMM2.0 at aa 21-40%2C 44-61%2C 95-117%2C 127-145%2C152-174%2C 194-216%2C 240-262%2C 282-304%2C 331-353%2C 357-379%2C399-421 and 425-444;gbkey=misc_feature;gene=aroP;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	1953271	1953363	.	+	.	ID=id3251;Note=PS00218 Amino acid permeases signature.;gbkey=misc_feature;gene=aroP;inference=protein motif:Prosite:PS00218
AM286415.1	EMBL	sequence_feature	1953493	1953540	.	+	.	ID=id3252;Note=PS00024 Hemopexin domain signature.;gbkey=misc_feature;gene=aroP;inference=protein motif:Prosite:PS00024
AM286415.1	EMBL	gene	1954778	1955392	.	-	.	ID=gene1742;Name=YE1762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1762
AM286415.1	EMBL	CDS	1954778	1955392	.	-	0	ID=cds1682;Parent=gene1742;Dbxref=EnsemblGenomes-Gn:YE1762,EnsemblGenomes-Tr:CAL11832,GOA:A1JM47,InterPro:IPR009746,InterPro:IPR011250,NCBI_GP:CAL11832.1;Name=CAL11832.1;Note=Similar to many including: Yersinia pestis putative exported protein Ypo1744 SWALL:Q8ZFG5 (EMBL:AJ414150) (199 aa) fasta scores: E(): 5.2e-65%2C 74.12 38d in 201 aa. Also similar towards the C-terminus to Salmonella typhi antimicrobial peptide resistance and lipid A acylation protein PagP or Sty0677 SWALL:Q8Z8I4 (EMBL:AL627267) (190 aa) fasta scores: E(): 3.9e-35%2C 53.12 38d in 160 aa and Salmonella typhimurium PagP SWALL:Q9ZHL7 (EMBL:AF057021) (186 aa) fasta scores: E(): 5.2e-35%2C 55.33 38d in 150 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627267;product=putative exported protein;protein_id=CAL11832.1;transl_table=11
AM286415.1	EMBL	gene	1956382	1956498	.	+	.	ID=gene1743;Name=YE1764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1764
AM286415.1	EMBL	CDS	1956382	1956498	.	+	0	ID=cds1683;Parent=gene1743;Dbxref=EnsemblGenomes-Gn:YE1764,EnsemblGenomes-Tr:CAL11833,InterPro:IPR019672,UniProtKB/TrEMBL:A1JM50,NCBI_GP:CAL11833.1;Name=CAL11833.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11833.1;transl_table=11
AM286415.1	EMBL	gene	1956541	1956750	.	+	.	ID=gene1744;Name=cspC1;gbkey=Gene;gene=cspC1;gene_biotype=protein_coding;gene_synonym=msmB;locus_tag=YE1765
AM286415.1	EMBL	CDS	1956541	1956750	.	+	0	ID=cds1684;Parent=gene1744;Dbxref=EnsemblGenomes-Gn:YE1765,EnsemblGenomes-Tr:CAL11834,GOA:A1JM53,InterPro:IPR002059,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,InterPro:IPR019844,UniProtKB/TrEMBL:A1JM53,NCBI_GP:CAL11834.1;Name=CAL11834.1;Note=Similar to Escherichia coli%2C Escherichia coli O157:H7%2C Salmonella typhimurium%2C and Salmonella typhi cold shock-like protein CspC cspC or msmB or b1823 or z2868 or ecs2533 or stm1837 or sty1967 SWALL:CSPC_ECOLI (SWALL:P36996) (68 aa) fasta scores: E(): 3.8e-26%2C 98.52 id in 68 aa%2C and to Yersinia pestis cold shock protein ypo1746 SWALL:Q8ZFG3 (EMBL:AJ414150) (69 aa) fasta scores: E(): 6.1e-27%2C 100 38d in 69 aa;gbkey=CDS;gene=cspC1;inference=similar to sequence:UniProtKB:P36996;product=cold shock-like protein cspC1;protein_id=CAL11834.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1956547	1956747	.	+	.	ID=id3253;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 154.0%2C E-value 1.6e-43;gbkey=misc_feature;gene=cspC1;inference=protein motif:PFAM:PF00313
AM286415.1	EMBL	sequence_feature	1956589	1956648	.	+	.	ID=id3254;Note=PS00352 'Cold-shock' DNA-binding domain signature.;gbkey=misc_feature;gene=cspC1;inference=protein motif:Prosite:PS00352
AM286415.1	EMBL	gene	1956828	1957547	.	-	.	ID=gene1745;Name=YE1766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1766
AM286415.1	EMBL	CDS	1956828	1957547	.	-	0	ID=cds1685;Parent=gene1745;Dbxref=EnsemblGenomes-Gn:YE1766,EnsemblGenomes-Tr:CAL11835,InterPro:IPR003730,InterPro:IPR011324,UniProtKB/TrEMBL:A1JM60,NCBI_GP:CAL11835.1;Name=CAL11835.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11835.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1956831	1957517	.	-	.	ID=id3255;Note=Pfam match to entry PF02578 DUF152%2C Uncharacterized ACR%2C YfiH family COG1496%2C score 105.7%2C E-value 5.8e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF02578
AM286415.1	EMBL	gene	1957750	1959459	.	+	.	ID=gene1746;Name=ftsI2;gbkey=Gene;gene=ftsI2;gene_biotype=protein_coding;locus_tag=YE1767
AM286415.1	EMBL	CDS	1957750	1959459	.	+	0	ID=cds1686;Parent=gene1746;Dbxref=EnsemblGenomes-Gn:YE1767,EnsemblGenomes-Tr:CAL11836,GOA:A1JM62,InterPro:IPR001460,InterPro:IPR005311,InterPro:IPR012338,UniProtKB/TrEMBL:A1JM62,NCBI_GP:CAL11836.1;Name=CAL11836.1;Note=Similar to many peptidoglycan synthetases including: Escherichia coli%2C and Escherichia coli O157:H7 peptidoglycan synthetase precursor FtsI or pbpb or b0084 or z0094 or ecs0088 SWALL:FTSI_ECOLI (SWALL:P04286) (588 aa) fasta scores: E(): 4e-164%2C 71.96 38d in 560 aa and Salmonella typhimurium%2C and Salmonella typhi putative penicillin-binding protein-3 Stm1836 or FtsI2 or Sty1965 SWALL:Q8XF62 (EMBL:AE008781) (581 aa) fasta scores: E(): 1.1e-157%2C 69.14 38d in 564 aa. The product of this CDS is also highly similar to YE0666 69.052 38dentity in 559 aa;gbkey=CDS;gene=ftsI2;inference=similar to sequence:UniProtKB:P04286;product=peptidoglycan synthetase;protein_id=CAL11836.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1957795	1957863	.	+	.	ID=id3256;Note=1 probable transmembrane helix predicted for YE1767 by TMHMM2.0 at aa 37-59;gbkey=misc_feature;gene=ftsI2;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	1957924	1958394	.	+	.	ID=id3257;Note=Pfam match to entry PF03717 PBP_dimer%2CPenicillin-binding Protein dimerisation domain%2C score 197.4%2C E-value 1.4e-56;gbkey=misc_feature;gene=ftsI2;inference=protein motif:PFAM:PF03717
AM286415.1	EMBL	sequence_feature	1958440	1959384	.	+	.	ID=id3258;Note=Pfam match to entry PF00905 Transpeptidase%2CPenicillin binding protein transpeptidase domain%2C score 409.0%2C E-value 2.9e-120;gbkey=misc_feature;gene=ftsI2;inference=protein motif:PFAM:PF00905
AM286415.1	EMBL	gene	1959577	1960437	.	+	.	ID=gene1747;Name=rrmA;gbkey=Gene;gene=rrmA;gene_biotype=protein_coding;locus_tag=YE1768
AM286415.1	EMBL	CDS	1959577	1960437	.	+	0	ID=cds1687;Parent=gene1747;Dbxref=EnsemblGenomes-Gn:YE1768,EnsemblGenomes-Tr:CAL11837,GOA:A1JM68,InterPro:IPR016718,InterPro:IPR025714,InterPro:IPR029063,UniProtKB/TrEMBL:A1JM68,NCBI_GP:CAL11837.1;Name=CAL11837.1;gbkey=CDS;gene=rrmA;product=rRNA (guanine-N1-)-methyltransferase;protein_id=CAL11837.1;transl_table=11
AM286415.1	EMBL	gene	1960600	1960878	.	-	.	ID=gene1748;Name=YE1769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1769
AM286415.1	EMBL	CDS	1960600	1960878	.	-	0	ID=cds1688;Parent=gene1748;Dbxref=EnsemblGenomes-Gn:YE1769,EnsemblGenomes-Tr:CAL11838,UniProtKB/TrEMBL:A1JM70,NCBI_GP:CAL11838.1;Name=CAL11838.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11838.1;transl_table=11
AM286415.1	EMBL	gene	1961046	1963121	.	-	.	ID=gene1749;Name=YE1770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1770
AM286415.1	EMBL	CDS	1961046	1963121	.	-	0	ID=cds1689;Parent=gene1749;Dbxref=EnsemblGenomes-Gn:YE1770,EnsemblGenomes-Tr:CAL11839,GOA:A1JM71,InterPro:IPR000014,InterPro:IPR000160,InterPro:IPR000700,InterPro:IPR001610,InterPro:IPR013767,InterPro:IPR029787,UniProtKB/TrEMBL:A1JM71,NCBI_GP:CAL11839.1;Name=CAL11839.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11839.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1961064	1961546	.	-	.	ID=id3259;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 218.0%2C E-value 9e-63;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	1961565	1961681	.	-	.	ID=id3260;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 10.2%2C E-value 0.24;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1961736	1961924	.	-	.	ID=id3261;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 42.3%2C E-value 7.2e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	1961979	1962107	.	-	.	ID=id3262;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 22.1%2C E-value 0.00087;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1962165	1962329	.	-	.	ID=id3263;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 16.9%2C E-value 0.00029;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	1962363	1962491	.	-	.	ID=id3264;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 26.1%2C E-value 5.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1962549	1962713	.	-	.	ID=id3265;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 16.5%2C E-value 0.0004;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	1962747	1962875	.	-	.	ID=id3266;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 26.3%2C E-value 4.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	1962897	1963097	.	-	.	ID=id3267;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 29.4%2C E-value 5.4e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	gene	1963919	1965973	.	+	.	ID=gene1750;Name=fcuA;gbkey=Gene;gene=fcuA;gene_biotype=protein_coding;locus_tag=YE1771
AM286415.1	EMBL	CDS	1963919	1965973	.	+	0	ID=cds1690;Parent=gene1750;Dbxref=EnsemblGenomes-Gn:YE1771,EnsemblGenomes-Tr:CAL11840,GOA:A1JM77,InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR010917,InterPro:IPR012910,UniProtKB/TrEMBL:A1JM77,NCBI_GP:CAL11840.1;Name=CAL11840.1;gbkey=CDS;gene=fcuA;product=ferrichrome receptor protein;protein_id=CAL11840.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1965644	1965970	.	+	.	ID=id3268;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 94.6%2C E-value 1.3e-25;gbkey=misc_feature;gene=fcuA;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	sequence_feature	1965917	1965970	.	+	.	ID=id3269;Note=PS01156 TonB-dependent receptor proteins signature 2.;gbkey=misc_feature;gene=fcuA;inference=protein motif:Prosite:PS01156
AM286415.1	EMBL	gene	1966103	1966672	.	-	.	ID=gene1751;Name=yebN;gbkey=Gene;gene=yebN;gene_biotype=protein_coding;locus_tag=YE1772
AM286415.1	EMBL	CDS	1966103	1966672	.	-	0	ID=cds1691;Parent=gene1751;Dbxref=EnsemblGenomes-Gn:YE1772,EnsemblGenomes-Tr:CAL11841,GOA:A1JM85,InterPro:IPR003810,InterPro:IPR022929,NCBI_GP:CAL11841.1;Name=CAL11841.1;gbkey=CDS;gene=yebN;product=putative membrane protein;protein_id=CAL11841.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1966592	1966660	.	-	.	ID=id3270;Note=6 probable transmembrane helices predicted for YE1772 by TMHMM2.0 at aa 5-27%2C 39-61%2C 71-86%2C 106-128%2C132-154 and 167-186;gbkey=misc_feature;gene=yebN;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	1966490	1966558	.	-	.	ID=id3270;Note=6 probable transmembrane helices predicted for YE1772 by TMHMM2.0 at aa 5-27%2C 39-61%2C 71-86%2C 106-128%2C132-154 and 167-186;gbkey=misc_feature;gene=yebN;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	1966415	1966462	.	-	.	ID=id3270;Note=6 probable transmembrane helices predicted for YE1772 by TMHMM2.0 at aa 5-27%2C 39-61%2C 71-86%2C 106-128%2C132-154 and 167-186;gbkey=misc_feature;gene=yebN;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	1966289	1966357	.	-	.	ID=id3270;Note=6 probable transmembrane helices predicted for YE1772 by TMHMM2.0 at aa 5-27%2C 39-61%2C 71-86%2C 106-128%2C132-154 and 167-186;gbkey=misc_feature;gene=yebN;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	1966211	1966279	.	-	.	ID=id3270;Note=6 probable transmembrane helices predicted for YE1772 by TMHMM2.0 at aa 5-27%2C 39-61%2C 71-86%2C 106-128%2C132-154 and 167-186;gbkey=misc_feature;gene=yebN;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	1966115	1966174	.	-	.	ID=id3270;Note=6 probable transmembrane helices predicted for YE1772 by TMHMM2.0 at aa 5-27%2C 39-61%2C 71-86%2C 106-128%2C132-154 and 167-186;gbkey=misc_feature;gene=yebN;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	1966139	1966354	.	-	.	ID=id3271;Note=Pfam match to entry PF02659 DUF204%2C Domain of unknown function DUF%2C score 103.1%2C E-value 3.6e-28;gbkey=misc_feature;gene=yebN;inference=protein motif:PFAM:PF02659
AM286415.1	EMBL	sequence_feature	1966427	1966657	.	-	.	ID=id3272;Note=Pfam match to entry PF02659 DUF204%2C Domain of unknown function DUF%2C score 126.8%2C E-value 2.7e-35;gbkey=misc_feature;gene=yebN;inference=protein motif:PFAM:PF02659
AM286415.1	EMBL	transcript	1966735	1966897	.	-	.	ID=rna76;Note=yybP-ykoY element (RF00080) as predicted by Rfam%2Cscore 51.60%2C positions 1 to 124;gbkey=misc_RNA
AM286415.1	EMBL	exon	1966735	1966897	.	-	.	ID=id3273;Parent=rna76;Note=yybP-ykoY element (RF00080) as predicted by Rfam%2Cscore 51.60%2C positions 1 to 124;gbkey=misc_RNA
AM286415.1	EMBL	gene	1967113	1967574	.	-	.	ID=gene1752;Name=yobD;gbkey=Gene;gene=yobD;gene_biotype=protein_coding;locus_tag=YE1773
AM286415.1	EMBL	CDS	1967113	1967574	.	-	0	ID=cds1692;Parent=gene1752;Dbxref=EnsemblGenomes-Gn:YE1773,EnsemblGenomes-Tr:CAL11842,GOA:A1JM96,InterPro:IPR009328,NCBI_GP:CAL11842.1;Name=CAL11842.1;gbkey=CDS;gene=yobD;product=putative membrane protein;protein_id=CAL11842.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1967497	1967565	.	-	.	ID=id3274;Note=3 probable transmembrane helices predicted for YE1773 by TMHMM2.0 at aa 4-26%2C 47-64 and 68-87;gbkey=misc_feature;gene=yobD;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	1967383	1967436	.	-	.	ID=id3274;Note=3 probable transmembrane helices predicted for YE1773 by TMHMM2.0 at aa 4-26%2C 47-64 and 68-87;gbkey=misc_feature;gene=yobD;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	1967314	1967373	.	-	.	ID=id3274;Note=3 probable transmembrane helices predicted for YE1773 by TMHMM2.0 at aa 4-26%2C 47-64 and 68-87;gbkey=misc_feature;gene=yobD;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	1967791	1968654	.	-	.	ID=gene1753;Name=manZ;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;gene_synonym=gptB,ptsM;locus_tag=YE1775
AM286415.1	EMBL	CDS	1967791	1968654	.	-	0	ID=cds1693;Parent=gene1753;Dbxref=EnsemblGenomes-Gn:YE1775,EnsemblGenomes-Tr:CAL11843,GOA:A1JMA0,InterPro:IPR004704,InterPro:IPR018405,UniProtKB/TrEMBL:A1JMA0,NCBI_GP:CAL11843.1;Name=CAL11843.1;gbkey=CDS;gene=manZ;product=PTS system%2C mannose-specific IID component;protein_id=CAL11843.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1967800	1968612	.	-	.	ID=id3275;Note=Pfam match to entry PF03613 EIID-AGA%2C PTS system mannose/fructose/sorbose family IID component%2C score 608.9%2C E-value 2e-180;gbkey=misc_feature;gene=manZ;inference=protein motif:PFAM:PF03613
AM286415.1	EMBL	sequence_feature	1968181	1968249	.	-	.	ID=id3276;Note=2 probable transmembrane helices predicted for YE1775 by TMHMM2.0 at aa 136-158 and 263-285;gbkey=misc_feature;gene=manZ;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	1967800	1967868	.	-	.	ID=id3276;Note=2 probable transmembrane helices predicted for YE1775 by TMHMM2.0 at aa 136-158 and 263-285;gbkey=misc_feature;gene=manZ;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	1967890	1967922	.	-	.	ID=id3277;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=manZ;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1968688	1969485	.	-	.	ID=gene1754;Name=manY;gbkey=Gene;gene=manY;gene_biotype=protein_coding;gene_synonym=pel,ptsP;locus_tag=YE1776
AM286415.1	EMBL	CDS	1968688	1969485	.	-	0	ID=cds1694;Parent=gene1754;Dbxref=EnsemblGenomes-Gn:YE1776,EnsemblGenomes-Tr:CAL11844,GOA:A1JMA2,InterPro:IPR004700,InterPro:IPR018404,UniProtKB/TrEMBL:A1JMA2,NCBI_GP:CAL11844.1;Name=CAL11844.1;gbkey=CDS;gene=manY;product=PTS system%2C mannose-specific IIC component;protein_id=CAL11844.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1969414	1969473	.	-	.	ID=id3278;Note=7 probable transmembrane helices predicted for YE1776 by TMHMM2.0 at aa 5-24%2C 34-56%2C 63-85%2C 95-117%2C138-160%2C 184-206 and 219-241;gbkey=misc_feature;gene=manY;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1969318	1969386	.	-	.	ID=id3278;Note=7 probable transmembrane helices predicted for YE1776 by TMHMM2.0 at aa 5-24%2C 34-56%2C 63-85%2C 95-117%2C138-160%2C 184-206 and 219-241;gbkey=misc_feature;gene=manY;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1969231	1969299	.	-	.	ID=id3278;Note=7 probable transmembrane helices predicted for YE1776 by TMHMM2.0 at aa 5-24%2C 34-56%2C 63-85%2C 95-117%2C138-160%2C 184-206 and 219-241;gbkey=misc_feature;gene=manY;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1969135	1969203	.	-	.	ID=id3278;Note=7 probable transmembrane helices predicted for YE1776 by TMHMM2.0 at aa 5-24%2C 34-56%2C 63-85%2C 95-117%2C138-160%2C 184-206 and 219-241;gbkey=misc_feature;gene=manY;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1969006	1969074	.	-	.	ID=id3278;Note=7 probable transmembrane helices predicted for YE1776 by TMHMM2.0 at aa 5-24%2C 34-56%2C 63-85%2C 95-117%2C138-160%2C 184-206 and 219-241;gbkey=misc_feature;gene=manY;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1968868	1968936	.	-	.	ID=id3278;Note=7 probable transmembrane helices predicted for YE1776 by TMHMM2.0 at aa 5-24%2C 34-56%2C 63-85%2C 95-117%2C138-160%2C 184-206 and 219-241;gbkey=misc_feature;gene=manY;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1968763	1968831	.	-	.	ID=id3278;Note=7 probable transmembrane helices predicted for YE1776 by TMHMM2.0 at aa 5-24%2C 34-56%2C 63-85%2C 95-117%2C138-160%2C 184-206 and 219-241;gbkey=misc_feature;gene=manY;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	1968772	1969479	.	-	.	ID=id3279;Note=Pfam match to entry PF03609 EII-Sor%2C PTS system sorbose-specific iic component%2C score 488.4%2C E-value 3.7e-144;gbkey=misc_feature;gene=manY;inference=protein motif:PFAM:PF03609
AM286415.1	EMBL	sequence_feature	1969438	1969470	.	-	.	ID=id3280;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=manY;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	1969703	1970668	.	-	.	ID=gene1755;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;gene_synonym=gptB,ptsL;locus_tag=YE1777
AM286415.1	EMBL	CDS	1969703	1970668	.	-	0	ID=cds1695;Parent=gene1755;Dbxref=EnsemblGenomes-Gn:YE1777,EnsemblGenomes-Tr:CAL11845,GOA:A1JMB5,InterPro:IPR004701,InterPro:IPR004720,InterPro:IPR013789,InterPro:IPR018455,UniProtKB/TrEMBL:A1JMB5,NCBI_GP:CAL11845.1;Name=CAL11845.1;gbkey=CDS;gene=manX;product=PTS system%2C mannose-specific IIAB component;protein_id=CAL11845.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1969736	1970188	.	-	.	ID=id3281;Note=Pfam match to entry PF03830 PTSIIB_sorb%2C PTS system sorbose subfamily IIB component%2C score 340.9%2C E-value 9.5e-100;gbkey=misc_feature;gene=manX;inference=protein motif:PFAM:PF03830
AM286415.1	EMBL	sequence_feature	1970369	1970641	.	-	.	ID=id3282;Note=Pfam match to entry PF03610 EIIA-man%2C PTS system fructose IIA component%2C score 163.3%2C E-value 2.7e-46;gbkey=misc_feature;gene=manX;inference=protein motif:PFAM:PF03610
AM286415.1	EMBL	gene	1971438	1972982	.	+	.	ID=gene1756;Name=yoaE;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=YE1778
AM286415.1	EMBL	CDS	1971438	1972982	.	+	0	ID=cds1696;Parent=gene1756;Dbxref=EnsemblGenomes-Gn:YE1778,EnsemblGenomes-Tr:CAL11847,GOA:A1JMB7,InterPro:IPR000644,InterPro:IPR005170,InterPro:IPR005496,InterPro:IPR016166,InterPro:IPR016169,UniProtKB/TrEMBL:A1JMB7,NCBI_GP:CAL11847.1;Name=CAL11847.1;gbkey=CDS;gene=yoaE;product=putative membrane protein;protein_id=CAL11847.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1971453	1972124	.	+	.	ID=id3283;Note=Pfam match to entry PF03741 TerC%2C Integral membrane protein TerC family%2C score 276.8%2C E-value 1.8e-80;gbkey=misc_feature;gene=yoaE;inference=protein motif:PFAM:PF03741
AM286415.1	EMBL	sequence_feature	1971474	1971542	.	+	.	ID=id3284;Note=7 probable transmembrane helices predicted for YE1778 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172%2C 185-207 and 212-231;gbkey=misc_feature;gene=yoaE;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	1971579	1971647	.	+	.	ID=id3284;Note=7 probable transmembrane helices predicted for YE1778 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172%2C 185-207 and 212-231;gbkey=misc_feature;gene=yoaE;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	1971690	1971743	.	+	.	ID=id3284;Note=7 probable transmembrane helices predicted for YE1778 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172%2C 185-207 and 212-231;gbkey=misc_feature;gene=yoaE;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	1971804	1971872	.	+	.	ID=id3284;Note=7 probable transmembrane helices predicted for YE1778 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172%2C 185-207 and 212-231;gbkey=misc_feature;gene=yoaE;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	1971900	1971953	.	+	.	ID=id3284;Note=7 probable transmembrane helices predicted for YE1778 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172%2C 185-207 and 212-231;gbkey=misc_feature;gene=yoaE;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	1971990	1972058	.	+	.	ID=id3284;Note=7 probable transmembrane helices predicted for YE1778 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172%2C 185-207 and 212-231;gbkey=misc_feature;gene=yoaE;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	1972071	1972130	.	+	.	ID=id3284;Note=7 probable transmembrane helices predicted for YE1778 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172%2C 185-207 and 212-231;gbkey=misc_feature;gene=yoaE;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	1972338	1972502	.	+	.	ID=id3285;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 32.9%2C E-value 4.7e-07;gbkey=misc_feature;gene=yoaE;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1972524	1972685	.	+	.	ID=id3286;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 30.6%2C E-value 2.3e-06;gbkey=misc_feature;gene=yoaE;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	1972719	1972964	.	+	.	ID=id3287;Note=Pfam match to entry PF03471 CorC_HlyC%2C Transporter associated domain%2C score 79.3%2C E-value 5.2e-21;gbkey=misc_feature;gene=yoaE;inference=protein motif:PFAM:PF03471
AM286415.1	EMBL	gene	1973872	1975236	.	-	.	ID=gene1757;Name=sdaA;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=YE1779
AM286415.1	EMBL	CDS	1973872	1975236	.	-	0	ID=cds1697;Parent=gene1757;Dbxref=EnsemblGenomes-Gn:YE1779,EnsemblGenomes-Tr:CAL11848,GOA:A1JMB8,InterPro:IPR004644,InterPro:IPR005130,InterPro:IPR005131,InterPro:IPR029009,UniProtKB/TrEMBL:A1JMB8,NCBI_GP:CAL11848.1;Name=CAL11848.1;gbkey=CDS;gene=sdaA;product=L-serine dehydratase;protein_id=CAL11848.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1973887	1974726	.	-	.	ID=id3288;Note=Pfam match to entry PF03313 SDH_alpha%2C Serine dehydratase alpha chain%2C score 666.2%2C E-value 1.1e-197;gbkey=misc_feature;gene=sdaA;inference=protein motif:PFAM:PF03313
AM286415.1	EMBL	sequence_feature	1974742	1975236	.	-	.	ID=id3289;Note=Pfam match to entry PF03315 SDH_beta%2C Serine dehydratase beta chain%2C score 318.2%2C E-value 6.4e-93;gbkey=misc_feature;gene=sdaA;inference=protein motif:PFAM:PF03315
AM286415.1	EMBL	gene	1975689	1976276	.	-	.	ID=gene1758;Name=YE1780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1780
AM286415.1	EMBL	CDS	1975689	1976276	.	-	0	ID=cds1698;Parent=gene1758;Dbxref=EnsemblGenomes-Gn:YE1780,EnsemblGenomes-Tr:CAL11849,GOA:A1JMC0,InterPro:IPR000059,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR023735,NCBI_GP:CAL11849.1;Name=CAL11849.1;Note=Similar to Yersinia pestis MutT-family protein Ypo1772 SWALL:Q8ZFE2 (EMBL:AJ414150) (199 aa) fasta scores: E(): 7.4e-58%2C 78.35 38d in 194 aa%2C and to Escherichia coli hypothetical protein YeaB yeab or b1813 SWALL:YEAB_ECOLI (SWALL:P43337) (192 aa) fasta scores: E(): 4e-42%2C 60.32 38d in 184 aa%2C and to Salmonella typhimurium%2C and Salmonella typhi hypothetical protein YeaB or stm1825 or sty1955 SWALL:YEAB_SALTY (SWALL:P43339) (192 aa) fasta scores: E(): 1.3e-41%2C 58.69 38d in 184 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P43339;product=mutT-family protein;protein_id=CAL11849.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1975782	1976126	.	-	.	ID=id3290;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 21.3%2C E-value 8e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	sequence_feature	1976061	1976123	.	-	.	ID=id3291;Note=PS01293 Uncharacterized protein family UPF0035 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01293
AM286415.1	EMBL	gene	1976289	1977659	.	-	.	ID=gene1759;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=YE1781
AM286415.1	EMBL	CDS	1976289	1977659	.	-	0	ID=cds1699;Parent=gene1759;Dbxref=EnsemblGenomes-Gn:YE1781,EnsemblGenomes-Tr:CAL11850,GOA:A1JLK4,InterPro:IPR005801,InterPro:IPR005802,InterPro:IPR006805,InterPro:IPR015890,InterPro:IPR019999,UniProtKB/TrEMBL:A1JLK4,NCBI_GP:CAL11850.1;Name=CAL11850.1;gbkey=CDS;gene=pabB;product=para-aminobenzoate synthase component I;protein_id=CAL11850.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1976313	1977092	.	-	.	ID=id3292;Note=Pfam match to entry PF00425 chorismate_bind%2Cchorismate binding enzyme%2C score 446.2%2C E-value 1.9e-131;gbkey=misc_feature;gene=pabB;inference=protein motif:PFAM:PF00425
AM286415.1	EMBL	gene	1977842	1978099	.	+	.	ID=gene1760;Name=YE1782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1782
AM286415.1	EMBL	CDS	1977842	1978099	.	+	0	ID=cds1700;Parent=gene1760;Dbxref=EnsemblGenomes-Gn:YE1782,EnsemblGenomes-Tr:CAL11853,InterPro:IPR005371,NCBI_GP:CAL11853.1;Name=CAL11853.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11853.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1977842	1977997	.	+	.	ID=id3293;Note=Pfam match to entry PF03701 UPF0181%2CUncharacterised protein family (UPF0181)%2C score 95.2%2CE-value 8.3e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF03701
AM286415.1	EMBL	gene	1978355	1979536	.	-	.	ID=gene1761;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=YE1784
AM286415.1	EMBL	CDS	1978355	1979536	.	-	0	ID=cds1701;Parent=gene1761;Dbxref=EnsemblGenomes-Gn:YE1784,EnsemblGenomes-Tr:CAL11855,GOA:A1JLK9,InterPro:IPR003135,InterPro:IPR005862,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR016185,NCBI_GP:CAL11855.1;Name=CAL11855.1;gbkey=CDS;gene=purT;product=phosphoribosylglycinamide formyltransferase;protein_id=CAL11855.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1978910	1979416	.	-	.	ID=id3294;Note=Pfam match to entry PF02222 ATP-grasp%2C ATP-grasp domain%2C score 143.2%2C E-value 3e-40;gbkey=misc_feature;gene=purT;inference=protein motif:PFAM:PF02222
AM286415.1	EMBL	gene	1979790	1981172	.	+	.	ID=gene1762;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=YE1785
AM286415.1	EMBL	CDS	1979790	1981172	.	+	0	ID=cds1702;Parent=gene1762;Dbxref=EnsemblGenomes-Gn:YE1785,EnsemblGenomes-Tr:CAL11856,GOA:A1JLM2,InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR005580,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR027417,InterPro:IPR028619,UniProtKB/TrEMBL:A1JLM2,NCBI_GP:CAL11856.1;Name=CAL11856.1;gbkey=CDS;gene=dbpA;product=ATP-dependent RNA helicase;protein_id=CAL11856.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1979838	1980449	.	+	.	ID=id3295;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 256.4%2C E-value 2.5e-74;gbkey=misc_feature;gene=dbpA;inference=protein motif:PFAM:PF00270
AM286415.1	EMBL	sequence_feature	1979931	1979954	.	+	.	ID=id3296;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=dbpA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	1980243	1980269	.	+	.	ID=id3297;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;gbkey=misc_feature;gene=dbpA;inference=protein motif:Prosite:PS00039
AM286415.1	EMBL	sequence_feature	1980585	1980800	.	+	.	ID=id3298;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 117.2%2C E-value 2.1e-32;gbkey=misc_feature;gene=dbpA;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	1980909	1981169	.	+	.	ID=id3299;Note=Pfam match to entry PF03880 DbpA%2C DbpA RNA binding domain%2C score 124.7%2C E-value 1.2e-34;gbkey=misc_feature;gene=dbpA;inference=protein motif:PFAM:PF03880
AM286415.1	EMBL	gene	1981268	1981588	.	+	.	ID=gene1763;Name=YE1786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1786
AM286415.1	EMBL	CDS	1981268	1981588	.	+	0	ID=cds1703;Parent=gene1763;Dbxref=EnsemblGenomes-Gn:YE1786,EnsemblGenomes-Tr:CAL11857,InterPro:IPR009813,UniProtKB/TrEMBL:A1JLM7,NCBI_GP:CAL11857.1;Name=CAL11857.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11857.1;transl_table=11
AM286415.1	EMBL	gene	1981628	1981936	.	+	.	ID=gene1764;Name=YE1787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1787
AM286415.1	EMBL	CDS	1981628	1981936	.	+	0	ID=cds1704;Parent=gene1764;Dbxref=EnsemblGenomes-Gn:YE1787,EnsemblGenomes-Tr:CAL11858,InterPro:IPR007374,InterPro:IPR008314,InterPro:IPR015947,NCBI_GP:CAL11858.1;Name=CAL11858.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11858.1;transl_table=11
AM286415.1	EMBL	gene	1982039	1982398	.	+	.	ID=gene1765;Name=YE1788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1788
AM286415.1	EMBL	CDS	1982039	1982398	.	+	0	ID=cds1705;Parent=gene1765;Dbxref=EnsemblGenomes-Gn:YE1788,EnsemblGenomes-Tr:CAL11859,InterPro:IPR025603,UniProtKB/TrEMBL:A1JLN4,NCBI_GP:CAL11859.1;Name=CAL11859.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11859.1;transl_table=11
AM286415.1	EMBL	gene	1982588	1984642	.	+	.	ID=gene1766;Name=ptrB;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;gene_synonym=rlp;locus_tag=YE1789
AM286415.1	EMBL	CDS	1982588	1984642	.	+	0	ID=cds1706;Parent=gene1766;Dbxref=EnsemblGenomes-Gn:YE1789,EnsemblGenomes-Tr:CAL11860,GOA:A1JLN7,InterPro:IPR001375,InterPro:IPR002470,InterPro:IPR023302,InterPro:IPR029058,UniProtKB/TrEMBL:A1JLN7,NCBI_GP:CAL11860.1;Name=CAL11860.1;gbkey=CDS;gene=ptrB;product=oligopeptidase B;protein_id=CAL11860.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1982594	1983823	.	+	.	ID=id3300;Note=Pfam match to entry PF02897 Peptidase_S9_N%2C Prolyl oligopeptidase%2C N-terminal beta-propeller domain%2C score 417.9%2C E-value 6e-123;gbkey=misc_feature;gene=ptrB;inference=protein motif:PFAM:PF02897
AM286415.1	EMBL	sequence_feature	1983644	1983670	.	+	.	ID=id3301;Note=PS00037 Myb DNA-binding domain repeat signature 1.;gbkey=misc_feature;gene=ptrB;inference=protein motif:Prosite:PS00037
AM286415.1	EMBL	sequence_feature	1983977	1984000	.	+	.	ID=id3302;Note=PS00501 Signal peptidases I serine active site.;gbkey=misc_feature;gene=ptrB;inference=protein motif:Prosite:PS00501
AM286415.1	EMBL	sequence_feature	1983983	1984222	.	+	.	ID=id3303;Note=Pfam match to entry PF00326 Peptidase_S9%2C Prolyl oligopeptidase family%2C score 125.9%2C E-value 4.7e-35;gbkey=misc_feature;gene=ptrB;inference=protein motif:PFAM:PF00326
AM286415.1	EMBL	gene	1984654	1985316	.	-	.	ID=gene1767;Name=exoX;gbkey=Gene;gene=exoX;gene_biotype=protein_coding;locus_tag=YE1790
AM286415.1	EMBL	CDS	1984654	1985316	.	-	0	ID=cds1707;Parent=gene1767;Dbxref=EnsemblGenomes-Gn:YE1790,EnsemblGenomes-Tr:CAL11861,GOA:A1JLP1,InterPro:IPR006055,InterPro:IPR012337,InterPro:IPR013520,UniProtKB/TrEMBL:A1JLP1,NCBI_GP:CAL11861.1;Name=CAL11861.1;Note=Highly similar to Escherichia coli exodeoxyribonuclease X ExoX or b1844 SWALL:EXOX_ECOLI (SWALL:P76281) (220 aa) fasta scores: E(): 3.4e-51%2C 60.64 id in 216 aa%2C and to Escherichia coli O157:H7 hypothetical protein z2894 or ecs2554 SWALL:Q8XCK6 (EMBL:AE005407) (220 aa) fasta scores: E(): 3.4e-51%2C 60.64 38d in 216 aa;gbkey=CDS;gene=exoX;inference=similar to sequence:UniProtKB:P76281;product=putative exodeoxyribonuclease;protein_id=CAL11861.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1984846	1985310	.	-	.	ID=id3304;Note=Pfam match to entry PF00929 Exonuclease%2CExonuclease%2C score 92.0%2C E-value 7.8e-25;gbkey=misc_feature;gene=exoX;inference=protein motif:PFAM:PF00929
AM286415.1	EMBL	repeat_region	1985353	1986701	.	-	.	ID=id3305;Note=insertion element IS1328;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	1985353	1985372	.	-	.	ID=id3306;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	1985629	1986633	.	-	.	ID=gene1768;Name=YE1791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1791
AM286415.1	EMBL	CDS	1985629	1986633	.	-	0	ID=cds1708;Parent=gene1768;Dbxref=EnsemblGenomes-Gn:YE1791,EnsemblGenomes-Tr:CAL11862,GOA:A1JLP2,InterPro:IPR002525,InterPro:IPR003346,UniProtKB/TrEMBL:A1JLP2,NCBI_GP:CAL11862.1;Name=CAL11862.1;Note=Previously sequenced as Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 1.7e-131%2C 98.8 38d in 334 aa. Also similar to Shigella flexneri 2A IS1328 transposase SWALL:Q93EZ2 (EMBL:AF326777) (334 aa) fasta scores: E(): 8e-98%2C 73.78 id in 328 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=transposase for insertion sequence element IS1328;protein_id=CAL11862.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1985743	1986081	.	-	.	ID=id3307;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 165.2%2CE-value 7e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	sequence_feature	1986163	1986441	.	-	.	ID=id3308;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 20.1%2C E-value 8.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	INVERTED	1986682	1986701	.	-	.	ID=id3309;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	1987170	1988126	.	+	.	ID=gene1769;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=YE1793
AM286415.1	EMBL	CDS	1987170	1988126	.	+	0	ID=cds1709;Parent=gene1769;Dbxref=EnsemblGenomes-Gn:YE1793,EnsemblGenomes-Tr:CAL11863,GOA:A1JLP4,InterPro:IPR000073,InterPro:IPR002410,InterPro:IPR005944,InterPro:IPR029058,UniProtKB/TrEMBL:A1JLP4,NCBI_GP:CAL11863.1;Name=CAL11863.1;gbkey=CDS;gene=pip;product=proline iminopeptidase;protein_id=CAL11863.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1987359	1988114	.	+	.	ID=id3310;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 94.3%2C E-value 1.6e-25;gbkey=misc_feature;gene=pip;inference=protein motif:PFAM:PF00561
AM286415.1	EMBL	gene	1988176	1988409	.	-	.	ID=gene1770;Name=holE;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=YE1794
AM286415.1	EMBL	CDS	1988176	1988409	.	-	0	ID=cds1710;Parent=gene1770;Dbxref=EnsemblGenomes-Gn:YE1794,EnsemblGenomes-Tr:CAL11864,GOA:A1JLP5,InterPro:IPR009052,InterPro:IPR011325,UniProtKB/TrEMBL:A1JLP5,NCBI_GP:CAL11864.1;Name=CAL11864.1;gbkey=CDS;gene=holE;product=DNA polymerase III%2C theta subunit;protein_id=CAL11864.1;transl_table=11
AM286415.1	EMBL	gene	1988793	1989302	.	+	.	ID=gene1771;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;gene_synonym=ftn,gen-165,rsgA;locus_tag=YE1795
AM286415.1	EMBL	CDS	1988793	1989302	.	+	0	ID=cds1711;Parent=gene1771;Dbxref=EnsemblGenomes-Gn:YE1795,EnsemblGenomes-Tr:CAL11865,GOA:A1JLP6,InterPro:IPR001519,InterPro:IPR008331,InterPro:IPR009040,InterPro:IPR009078,InterPro:IPR012347,UniProtKB/TrEMBL:A1JLP6,NCBI_GP:CAL11865.1;Name=CAL11865.1;gbkey=CDS;gene=ftnA;product=ferritin;protein_id=CAL11865.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1988811	1989224	.	+	.	ID=id3311;Note=Pfam match to entry PF00210 ferritin%2C Ferritin-like domain%2C score 175.3%2C E-value 6.3e-50;gbkey=misc_feature;gene=ftnA;inference=protein motif:PFAM:PF00210
AM286415.1	EMBL	gene	1989693	1990079	.	+	.	ID=gene1772;Name=YE1796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1796
AM286415.1	EMBL	CDS	1989693	1990079	.	+	0	ID=cds1712;Parent=gene1772;Dbxref=EnsemblGenomes-Gn:YE1796,EnsemblGenomes-Tr:CAL11866,GOA:A1JLM6,InterPro:IPR007348,InterPro:IPR014755,InterPro:IPR014756,UniProtKB/TrEMBL:A1JLM6,NCBI_GP:CAL11866.1;Name=CAL11866.1;gbkey=CDS;product=putative copper resistance protein;protein_id=CAL11866.1;transl_table=11
AM286415.1	EMBL	gene	1990081	1990965	.	+	.	ID=gene1773;Name=YE1797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1797
AM286415.1	EMBL	CDS	1990081	1990965	.	+	0	ID=cds1713;Parent=gene1773;Dbxref=EnsemblGenomes-Gn:YE1797,EnsemblGenomes-Tr:CAL11867,GOA:A1JLN1,InterPro:IPR008457,UniProtKB/TrEMBL:A1JLN1,NCBI_GP:CAL11867.1;Name=CAL11867.1;gbkey=CDS;product=putative copper resistance protein D;protein_id=CAL11867.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1990108	1990176	.	+	.	ID=id3312;Note=8 probable transmembrane helices predicted for YE1797 by TMHMM2.0 at aa 10-32%2C 44-66%2C 94-111%2C 116-138%2C153-175%2C 194-216%2C 231-253 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	1990210	1990278	.	+	.	ID=id3312;Note=8 probable transmembrane helices predicted for YE1797 by TMHMM2.0 at aa 10-32%2C 44-66%2C 94-111%2C 116-138%2C153-175%2C 194-216%2C 231-253 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	1990360	1990413	.	+	.	ID=id3312;Note=8 probable transmembrane helices predicted for YE1797 by TMHMM2.0 at aa 10-32%2C 44-66%2C 94-111%2C 116-138%2C153-175%2C 194-216%2C 231-253 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	1990426	1990494	.	+	.	ID=id3312;Note=8 probable transmembrane helices predicted for YE1797 by TMHMM2.0 at aa 10-32%2C 44-66%2C 94-111%2C 116-138%2C153-175%2C 194-216%2C 231-253 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	1990537	1990605	.	+	.	ID=id3312;Note=8 probable transmembrane helices predicted for YE1797 by TMHMM2.0 at aa 10-32%2C 44-66%2C 94-111%2C 116-138%2C153-175%2C 194-216%2C 231-253 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	1990660	1990728	.	+	.	ID=id3312;Note=8 probable transmembrane helices predicted for YE1797 by TMHMM2.0 at aa 10-32%2C 44-66%2C 94-111%2C 116-138%2C153-175%2C 194-216%2C 231-253 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	1990771	1990839	.	+	.	ID=id3312;Note=8 probable transmembrane helices predicted for YE1797 by TMHMM2.0 at aa 10-32%2C 44-66%2C 94-111%2C 116-138%2C153-175%2C 194-216%2C 231-253 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	1990876	1990944	.	+	.	ID=id3312;Note=8 probable transmembrane helices predicted for YE1797 by TMHMM2.0 at aa 10-32%2C 44-66%2C 94-111%2C 116-138%2C153-175%2C 194-216%2C 231-253 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	1991047	1991403	.	+	.	ID=gene1774;Name=yebY;gbkey=Gene;gene=yebY;gene_biotype=protein_coding;locus_tag=YE1798
AM286415.1	EMBL	CDS	1991047	1991403	.	+	0	ID=cds1714;Parent=gene1774;Dbxref=EnsemblGenomes-Gn:YE1798,EnsemblGenomes-Tr:CAL11868,InterPro:IPR019648,UniProtKB/TrEMBL:A1JLP8,NCBI_GP:CAL11868.1;Name=CAL11868.1;gbkey=CDS;gene=yebY;product=putative exported protein;protein_id=CAL11868.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1991071	1991139	.	+	.	ID=id3313;Note=1 probable transmembrane helix predicted for YE1798 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;gene=yebY;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	transcript	1991547	1991664	.	-	.	ID=rna77;Note=SraC/RyeA RNA (RF00101) as predicted by Rfam%2C score 64.71%2C positions 49 to 165;gbkey=misc_RNA
AM286415.1	EMBL	exon	1991547	1991664	.	-	.	ID=id3314;Parent=rna77;Note=SraC/RyeA RNA (RF00101) as predicted by Rfam%2C score 64.71%2C positions 49 to 165;gbkey=misc_RNA
AM286415.1	EMBL	transcript	1991571	1991671	.	+	.	ID=rna78;Note=RyeB RNA (RF00111) as predicted by Rfam%2C score 64.59%2C positions 1 to 100;gbkey=misc_RNA
AM286415.1	EMBL	exon	1991571	1991671	.	+	.	ID=id3315;Parent=rna78;Note=RyeB RNA (RF00111) as predicted by Rfam%2C score 64.59%2C positions 1 to 100;gbkey=misc_RNA
AM286415.1	EMBL	sequence_feature	1991720	2007210	.	-	.	ID=id3316;Note=YE200%3B possible degenerate prophage;gbkey=misc_feature;standard_name=YE200
AM286415.1	EMBL	gene	1991800	1992855	.	-	.	ID=gene1775;Name=int;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=YE1799
AM286415.1	EMBL	CDS	1991800	1992855	.	-	0	ID=cds1715;Parent=gene1775;Dbxref=EnsemblGenomes-Gn:YE1799,EnsemblGenomes-Tr:CAL11869,GOA:A1JLQ1,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013087,InterPro:IPR013762,InterPro:IPR015094,InterPro:IPR016177,InterPro:IPR023109,UniProtKB/TrEMBL:A1JLQ1,NCBI_GP:CAL11869.1;Name=CAL11869.1;Note=Similar to many bacteriophage integrases including: Bacteriophage HK022 Int SWALL:VINT_BPHK0 (SWALL:P16407) (357 aa) fasta scores: E(): 3.5e-29%2C 38.08 38d in 323 aa%2CSalmonella typhi putative integrase Sty2077 SWALL:Q8Z5Y3 (EMBL:AL627272) (358 aa) fasta scores: E(): 6.9e-50%2C46.22 38d in 318 aa and to Bacteriophage lambda Integrase Int SWALL:VINT_LAMBD (SWALL:P03700) (356 aa) fasta scores: E(): 4.5e-28%2C 37.15 38d in 323 aa;gbkey=CDS;gene=int;inference=similar to sequence:UniProtKB:P16407;product=phage integrase;protein_id=CAL11869.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1991803	1992348	.	-	.	ID=id3317;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score -37.3%2C E-value 0.11;gbkey=misc_feature;gene=int;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	sequence_feature	1991824	1991889	.	-	.	ID=id3318;Note=Predicted helix-turn-helix motif with score 1227.000%2C SD 3.37 at aa 217-238%2C sequence FTRSAAWHRGCMKQNTVRNLHR;gbkey=misc_feature;gene=int
AM286415.1	EMBL	gene	1992830	1993099	.	-	.	ID=gene1776;Name=xis;gbkey=Gene;gene=xis;gene_biotype=protein_coding;locus_tag=YE1800
AM286415.1	EMBL	CDS	1992830	1993099	.	-	0	ID=cds1716;Parent=gene1776;Dbxref=EnsemblGenomes-Gn:YE1800,EnsemblGenomes-Tr:CAL11870,GOA:A1JLQ4,InterPro:IPR009061,InterPro:IPR012884,UniProtKB/TrEMBL:A1JLQ4,NCBI_GP:CAL11870.1;Name=CAL11870.1;Note=Similar to many bacteriophage excisionases including: lambda excisionase Xis SWALL:VXIS_LAMBD (SWALL:P03699) (72 aa) fasta scores: E(): 0.047%2C 30.95 38d in 84 aa and Salmonella typhi putative excisionase Sty2076 SWALL:Q8Z5Y4 (EMBL:AL627272) (93 aa) fasta scores: E(): 2.4e-09%2C 45.78 38d in 83 aa;gbkey=CDS;gene=xis;inference=similar to sequence:UniProtKB:P03699;product=excisionase;protein_id=CAL11870.1;transl_table=11
AM286415.1	EMBL	gene	1993206	1993514	.	-	.	ID=gene1777;Name=YE1801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1801
AM286415.1	EMBL	CDS	1993206	1993514	.	-	0	ID=cds1717;Parent=gene1777;Dbxref=EnsemblGenomes-Gn:YE1801,EnsemblGenomes-Tr:CAL11871,UniProtKB/TrEMBL:A1JLQ8,NCBI_GP:CAL11871.1;Name=CAL11871.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage-related protein;protein_id=CAL11871.1;transl_table=11
AM286415.1	EMBL	gene	1993532	1993870	.	-	.	ID=gene1778;Name=YE1802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1802
AM286415.1	EMBL	CDS	1993532	1993870	.	-	0	ID=cds1718;Parent=gene1778;Dbxref=EnsemblGenomes-Gn:YE1802,EnsemblGenomes-Tr:CAL11872,UniProtKB/TrEMBL:A1JLR1,NCBI_GP:CAL11872.1;Name=CAL11872.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11872.1;transl_table=11
AM286415.1	EMBL	repeat_region	1993921	1994930	.	-	.	ID=id3319;Note=Partial insertion sequence elment IS1329;gbkey=repeat_region
AM286415.1	EMBL	gene	1993951	1994700	.	-	.	ID=gene1779;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=YE1803
AM286415.1	EMBL	CDS	1993951	1994700	.	-	0	ID=cds1719;Parent=gene1779;Dbxref=EnsemblGenomes-Gn:YE1803,EnsemblGenomes-Tr:CAL11873,GOA:A1JLR3,InterPro:IPR001584,InterPro:IPR012337,InterPro:IPR025948,UniProtKB/TrEMBL:A1JLR3,NCBI_GP:CAL11873.1;Name=CAL11873.1;Note=Previously sequenced as Yersinia enterocolitica transposase B TnpB SWALL:Q9RIG3 (EMBL:AJ251581) (249 aa) fasta scores: E(): 1.2e-104%2C 100 38d in 249 aa. Also similar to Xanthomonas axonopodis pv. citri str. 306 ISxac3 transposase Xac3248 SWALL:AAM38092 (EMBL:AE011970) (272 aa) fasta scores: E(): 3.2e-37%2C 44.13 38d in 247 aa;gbkey=CDS;gene=tnpB;inference=similar to sequence:INSDC:AJ251581;product=transposase B;protein_id=CAL11873.1;transl_table=11
AM286415.1	EMBL	sequence_feature	1993972	1994454	.	-	.	ID=id3320;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 133.0%2C E-value 3.5e-37;gbkey=misc_feature;gene=tnpB;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	pseudogene	1994790	1994930	.	-	.	ID=gene1780;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;gene_synonym=1803A;locus_tag=YE1803A;pseudo=true
AM286415.1	EMBL	CDS	1994790	1994930	.	-	0	ID=cds1720;Parent=gene1780;Note=Previously sequenced as Yersinia enterocolitica IS1329 transposase A Trp1329A SWALL:Q9X9I2 (EMBL:AJ132945) (110 aa) fasta scores: E(): 1.4e-14%2C 100 38d in 46 aa. The Insertion element has been disrupted by the subsequent insertion of a phage-like element. This wouold result in the deletion of 64 residues from the N-terminus of the predicted product of this CDS.;gbkey=CDS;gene=tnpA;inference=similar to sequence:INSDC:AJ132945;product=IS1329 transposase A (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	pseudogene	1994930	1995937	.	+	.	ID=gene1781;Name=YE1804;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1804;pseudo=true
AM286415.1	EMBL	CDS	1994930	1995937	.	+	0	ID=cds1721;Parent=gene1781;Note=Similar many P2-like terminases including: Bacteriophage P2 terminase%2C ATPase subunit P SWALL:VPP_BPP2 (SWALL:P25479) (590 aa) fasta scores: E(): 4.2e-96%2C 68.86 38d in 334 aa%2C Bacteriophage 186 terminase subunit SWALL:Q9T0R3 (EMBL:U32222) (589 aa) fasta scores: E(): 6.1e-99%2C 70.35 38d in 334 aa and Salmonella typhi terminase%2C ATPase subunit Sty3675 SWALL:Q8Z358 (EMBL:AL627279) (588 aa) fasta scores: E(): 3.8e-98%2C69.36 38d in 333 aa.%3B This CDS is likely to have been disrupted by the insertion of an IS1329 element;gbkey=CDS;inference=similar to sequence:UniProtKB:P25479;product=terminase%2C ATPase subunit (remnant);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	1995934	1996935	.	+	.	ID=gene1782;Name=YE1805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1805
AM286415.1	EMBL	CDS	1995934	1996935	.	+	0	ID=cds1722;Parent=gene1782;Dbxref=EnsemblGenomes-Gn:YE1805,EnsemblGenomes-Tr:CAL11876,InterPro:IPR006430,InterPro:IPR006944,UniProtKB/TrEMBL:A1JLS0,NCBI_GP:CAL11876.1;Name=CAL11876.1;Note=Similar to many bacteriophage portal proteins including: Bacteriophage P2 presumed portal vertex protein Q SWALL:VPQ_BPP2 (SWALL:P25480) (344 aa) fasta scores: E(): 1.2e-88%2C 65.95 38d in 329 aa%2C Bacteriophage 186 capsid portal protein W SWALL:Q37851 (EMBL:U32222) (340 aa) fasta scores: E(): 5.4e-93%2C 67.79 38d in 326 aa and Salmonella typhimurium fels-2 prophage: similar to gpQ%2Cportal vector protein or stm2723 SWALL:Q8ZMS9 (EMBL:AE008824) (346 aa) fasta scores: E(): 1.5e-91%2C70.35 38d in 307 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P25480;product=phage portal vertex protein;protein_id=CAL11876.1;transl_table=11
AM286415.1	EMBL	gene	1996992	1997513	.	-	.	ID=gene1783;Name=YE1806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1806
AM286415.1	EMBL	CDS	1996992	1997513	.	-	0	ID=cds1723;Parent=gene1783;Dbxref=EnsemblGenomes-Gn:YE1806,EnsemblGenomes-Tr:CAL11877,UniProtKB/TrEMBL:A1JLS3,NCBI_GP:CAL11877.1;Name=CAL11877.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL11877.1;transl_table=11
AM286415.1	EMBL	gene	1997545	1998006	.	-	.	ID=gene1784;Name=YE1807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1807
AM286415.1	EMBL	CDS	1997545	1998006	.	-	0	ID=cds1724;Parent=gene1784;Dbxref=EnsemblGenomes-Gn:YE1807,EnsemblGenomes-Tr:CAL11878,UniProtKB/TrEMBL:A1JLS5,NCBI_GP:CAL11878.1;Name=CAL11878.1;Note=Previously sequenced as Yersinia enterocolitica hypothetical protein SWALL:Q8VLR9 (EMBL:AJ414030) (153 aa) fasta scores: E(): 1.4e-58%2C 100 38d in 153 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414030;product=hypothetical phage protein;protein_id=CAL11878.1;transl_table=11
AM286415.1	EMBL	gene	1998216	2000696	.	-	.	ID=gene1785;Name=yenI;gbkey=Gene;gene=yenI;gene_biotype=protein_coding;locus_tag=YE1808
AM286415.1	EMBL	CDS	1998216	2000696	.	-	0	ID=cds1725;Parent=gene1785;Dbxref=EnsemblGenomes-Gn:YE1808,EnsemblGenomes-Tr:CAL11879,GOA:A1JLS8,InterPro:IPR002296,InterPro:IPR009528,InterPro:IPR011639,InterPro:IPR029063,UniProtKB/TrEMBL:A1JLS8,NCBI_GP:CAL11879.1;Name=CAL11879.1;Note=Previously sequenced as: Yersinia enterocolitica methyltransferase-endonuclease YenI SWALL:Q8VLS0 (EMBL:AJ414030) (826 aa) fasta scores: E(): 0%2C 100 38d in 826 aa. Also highly similar to Bacillus subtilis type II restriction enzyme BsuBI or hsrB SWALL:T2BB_BACSU (SWALL:P33562) (316 aa) fasta scores: E(): 2e-72%2C 55.41 id in 305 aa;gbkey=CDS;gene=yenI;inference=similar to sequence:UniProtKB:P33562;product=methyltransferase-endonuclease;protein_id=CAL11879.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2000265	2000285	.	-	.	ID=id3321;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;gene=yenI;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	2000971	2001138	.	-	.	ID=gene1786;Name=YE1809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1809
AM286415.1	EMBL	CDS	2000971	2001138	.	-	0	ID=cds1726;Parent=gene1786;Dbxref=EnsemblGenomes-Gn:YE1809,EnsemblGenomes-Tr:CAL11880,UniProtKB/TrEMBL:A1JLT1,NCBI_GP:CAL11880.1;Name=CAL11880.1;Note=Weakly similar in parts to Ralstonia solanacearum hypothetical protein Rsc1697 or rs04093 SWALL:Q8XYR1 (EMBL:AL646065) (112 aa) fasta scores: E(): 3.3e-05%2C45.09 38d in 51 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646065;product=hypothetical phage protein;protein_id=CAL11880.1;transl_table=11
AM286415.1	EMBL	repeat_region	2001363	2002502	.	+	.	ID=id3322;Note=insertion element IS1222;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	2001363	2001388	.	+	.	ID=id3323;Note=Inverted repeat for insertion element IS1222;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	2001434	2001697	.	+	.	ID=gene1787;Name=YE1810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1810
AM286415.1	EMBL	CDS	2001434	2001697	.	+	0	ID=cds1727;Parent=gene1787;Dbxref=EnsemblGenomes-Gn:YE1810,EnsemblGenomes-Tr:CAL11882,GOA:A1JLT4,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JLT4,NCBI_GP:CAL11882.1;Name=CAL11882.1;Note=Previously sequenced as Yersinia enterocolitica%2Cand Pantoea agglomerans transposase SWALL:Q46611 (EMBL:AJ414030) (87 aa) fasta scores: E(): 1.8e-30%2C 100 id in 87 aa. Highly similar to many other insertion element proteins including: Pantoea agglomerans pv. gypsophilae orfA SWALL:Q9AMM2 (EMBL:AF324174) (87 aa) fasta scores: E(): 5.5e-29%2C 95.4 38d in 87 aa and Burkholderia cepacia insertion element IS407 hypothetical 10.0 kDa protein SWALL:YI74_BURCE (SWALL:P24580) (87 aa) fasta scores: E(): 1.9e-20%2C 70.93 38d in 86 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P24580;product=Insertion element protein;protein_id=CAL11882.1;transl_table=11
AM286415.1	EMBL	transcript	2001664	2001781	.	+	.	ID=rna79;Note=Insertion sequence IS1222 ribosomal frameshifting element (RF00383) as predicted by Rfam%2C score 107.86%2Cpositions 1 to 118;gbkey=misc_RNA
AM286415.1	EMBL	exon	2001664	2001781	.	+	.	ID=id3324;Parent=rna79;Note=Insertion sequence IS1222 ribosomal frameshifting element (RF00383) as predicted by Rfam%2C score 107.86%2Cpositions 1 to 118;gbkey=misc_RNA
AM286415.1	EMBL	gene	2001724	2002473	.	+	.	ID=gene1788;Name=YE1811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1811
AM286415.1	EMBL	CDS	2001724	2002473	.	+	0	ID=cds1728;Parent=gene1788;Dbxref=EnsemblGenomes-Gn:YE1811,EnsemblGenomes-Tr:CAL11883,GOA:A1JLT7,InterPro:IPR001584,InterPro:IPR012337,UniProtKB/TrEMBL:A1JLT7,NCBI_GP:CAL11883.1;Name=CAL11883.1;Note=Previously sequenced as Yersinia enterocolitica IS1222-like transposase SWALL:Q9X9I1 (EMBL:AJ132945) (165 aa) fasta scores: E(): 1e-68%2C 100 38d in 165 aa. Also similar to many transposases including: Ralstonia solanacearum ISrso14-transposase B protein SWALL:Q8XF72 (EMBL:AL646083) (275 aa) fasta scores: E(): 3.8e-49%2C59.21 38d in 255 aa and to Burkholderia cepacia insertion element IS407 hypothetical 20.5 kDa protein SWALL:YI71_BURCE (SWALL:P24577) (183 aa) fasta scores: E(): 2.2e-47%2C 69.04 38d in 168 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P24577;product=transposase for insertion element IS1222;protein_id=CAL11883.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2001748	2001813	.	+	.	ID=id3325;Note=Predicted helix-turn-helix motif with score 1115.000%2C SD 2.98 at aa 9-30%2C sequence LSQRRACRLTGLSLSTCRYEAQ;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	2001946	2002422	.	+	.	ID=id3326;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 152.3%2C E-value 5.6e-43;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	INVERTED	2002478	2002502	.	-	.	ID=id3327;Note=Inverted repeat for insertion element IS1222;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	2002787	2002862	.	+	.	ID=gene1789;Name=tRNA-Thr (CGT);gbkey=Gene;gene=tRNA-Thr (CGT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2002787	2002862	.	+	.	ID=rna80;Parent=gene1789;gbkey=tRNA;gene=tRNA-Thr (CGT);product=tRNA-Thr
AM286415.1	EMBL	exon	2002787	2002862	.	+	.	ID=id3328;Parent=rna80;gbkey=tRNA;gene=tRNA-Thr (CGT);product=tRNA-Thr
AM286415.1	EMBL	gene	2002864	2002938	.	+	.	ID=gene1790;Name=tRNA-Gly (TCC);gbkey=Gene;gene=tRNA-Gly (TCC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2002864	2002938	.	+	.	ID=rna81;Parent=gene1790;gbkey=tRNA;gene=tRNA-Gly (TCC);product=tRNA-Gly
AM286415.1	EMBL	exon	2002864	2002938	.	+	.	ID=id3329;Parent=rna81;gbkey=tRNA;gene=tRNA-Gly (TCC);product=tRNA-Gly
AM286415.1	EMBL	gene	2003309	2003704	.	+	.	ID=gene1791;Name=YE1813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1813
AM286415.1	EMBL	CDS	2003309	2003704	.	+	0	ID=cds1729;Parent=gene1791;Dbxref=EnsemblGenomes-Gn:YE1813,EnsemblGenomes-Tr:CAL11884,UniProtKB/TrEMBL:A1JLU2,NCBI_GP:CAL11884.1;Name=CAL11884.1;Note=Similar to several bacteriophage proteins including: Ralstonia solanacearum probable phage-related transmembrane protein Rsc1933 or rs03502 SWALL:Q8XY30 (EMBL:AL646067) (134 aa) fasta scores: E(): 0.076%2C 33.07 id in 127 aa%2C Bacteriophage P27 hypothetical protein SWALL:Q9MBZ5 (EMBL:AJ249351) (130 aa) fasta scores: E(): 4.7%2C 31.57 38d in 114 aa and to Bacteriophage P27 putative holin SWALL:Q8W636 (EMBL:AJ298298) (144 aa) fasta scores: E(): 5.1%2C 31.57 38d in 114 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646067;product=putative exported phage-related protein;protein_id=CAL11884.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2003372	2003440	.	+	.	ID=id3330;Note=3 probable transmembrane helices predicted for YE1813 by TMHMM2.0 at aa 22-44%2C 56-78 and 93-115;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2003474	2003542	.	+	.	ID=id3330;Note=3 probable transmembrane helices predicted for YE1813 by TMHMM2.0 at aa 22-44%2C 56-78 and 93-115;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2003585	2003653	.	+	.	ID=id3330;Note=3 probable transmembrane helices predicted for YE1813 by TMHMM2.0 at aa 22-44%2C 56-78 and 93-115;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	2003704	2004000	.	+	.	ID=gene1792;Name=YE1814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1814
AM286415.1	EMBL	CDS	2003704	2004000	.	+	0	ID=cds1730;Parent=gene1792;Dbxref=EnsemblGenomes-Gn:YE1814,EnsemblGenomes-Tr:CAL11885,InterPro:IPR008473,UniProtKB/TrEMBL:A1JLU7,NCBI_GP:CAL11885.1;Name=CAL11885.1;Note=Similar to Bacteriophage P27 hypothetical protein SWALL:Q9MBZ4 (EMBL:AJ249351) (91 aa) fasta scores: E(): 0.019%2C 29.87 38d in 77 aa and to Salmonella typhi putative prophage membrane protein Sty1041 SWALL:Q8Z7W3 (EMBL:AL627268) (93 aa) fasta scores: E(): 3.9e-05%2C 33.76 id in 77 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627268;product=hypothetical 10.5 kDa protein;protein_id=CAL11885.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2003719	2003778	.	+	.	ID=id3331;Note=3 probable transmembrane helices predicted for YE1814 by TMHMM2.0 at aa 6-25%2C 32-51 and 66-88;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2003797	2003856	.	+	.	ID=id3331;Note=3 probable transmembrane helices predicted for YE1814 by TMHMM2.0 at aa 6-25%2C 32-51 and 66-88;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2003899	2003967	.	+	.	ID=id3331;Note=3 probable transmembrane helices predicted for YE1814 by TMHMM2.0 at aa 6-25%2C 32-51 and 66-88;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	2003987	2004529	.	+	.	ID=gene1793;Name=YE1815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1815
AM286415.1	EMBL	CDS	2003987	2004529	.	+	0	ID=cds1731;Parent=gene1793;Dbxref=EnsemblGenomes-Gn:YE1815,EnsemblGenomes-Tr:CAL11886,InterPro:IPR008565,InterPro:IPR018537,InterPro:IPR023346,UniProtKB/TrEMBL:A1JLV1,NCBI_GP:CAL11886.1;Name=CAL11886.1;Note=Similar to many including: bacteriophage phi-8 bacteriophage phi-8 segment S SWALL:Q9MC03 (EMBL:AF226853) (169 aa) fasta scores: E(): 1.1%2C 29.41 38d in 136 aa%2CSalmonella typhi hypothetical protein Sty1889 SWALL:Q8Z6A5 (EMBL:AL627271) (180 aa) fasta scores: E(): 4.1e-51%2C69.66 38d in 178 aa and Salmonella typhimurium hypothetical protein Stm0016 SWALL:Q8ZS11 (EMBL:AE008693) (177 aa) fasta scores: E(): 1.7e-40%2C 60.34 38d in 174 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627271;product=conserved hypothetical phage protein;protein_id=CAL11886.1;transl_table=11
AM286415.1	EMBL	gene	2004575	2005024	.	+	.	ID=gene1794;Name=YE1816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1816
AM286415.1	EMBL	CDS	2004575	2005024	.	+	0	ID=cds1732;Parent=gene1794;Dbxref=EnsemblGenomes-Gn:YE1816,EnsemblGenomes-Tr:CAL11887,GOA:A1JLU8,InterPro:IPR004929,UniProtKB/TrEMBL:A1JLU8,NCBI_GP:CAL11887.1;Name=CAL11887.1;Note=Similar to many bacteriophage endopeptidases including: Bacteriophage lambda endopeptidase rZ SWALL:ENPP_LAMBD (SWALL:P00726) (153 aa) fasta scores: E(): 9.5e-17%2C 43.13 38d in 153 aa%2C Bacteriophage 933W endopeptidase RZ SWALL:Q9XJJ6 (EMBL:AF125520) (154 aa) fasta scores: E(): 1e-19%2C 49.02 38d in 153 aa and Bacteriophage VT2-Sa SWALL:Q9T1L2 (EMBL:AP000363) (155 aa) fasta scores: E(): 2.1e-19%2C 48.7 38d in 154 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P00726;product=putative phage endopeptidase;protein_id=CAL11887.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2004605	2005015	.	+	.	ID=id3332;Note=Pfam match to entry PF03245 Phage_lysis%2CBacteriophage lysis protein%2C score 153.6%2C E-value 2.2e-43;gbkey=misc_feature;inference=protein motif:PFAM:PF03245
AM286415.1	EMBL	repeat_region	2005360	2006708	.	+	.	ID=id3333;Note=insertion element IS1328;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	2005360	2005378	.	+	.	ID=id3334;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	2005427	2006431	.	+	.	ID=gene1795;Name=YE1818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1818
AM286415.1	EMBL	CDS	2005427	2006431	.	+	0	ID=cds1733;Parent=gene1795;Dbxref=EnsemblGenomes-Gn:YE1818,EnsemblGenomes-Tr:CAL11889,GOA:A1JLV2,InterPro:IPR002525,InterPro:IPR003346,UniProtKB/TrEMBL:A1JLV2,NCBI_GP:CAL11889.1;Name=CAL11889.1;Note=Previously sequenced as Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 3.1e-129%2C 97.3 38d in 334 aa. Also similar to Shigella flexneri 2A IS1328 transposase SWALL:Q93EZ2 (EMBL:AF326777) (334 aa) fasta scores: E(): 8.9e-98%2C74.08 38d in 328 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=transposase for insertion sequence element IS1328;protein_id=CAL11889.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2005619	2005897	.	+	.	ID=id3335;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 20.7%2C E-value 7.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	sequence_feature	2005979	2006317	.	+	.	ID=id3336;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 165.2%2CE-value 7e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	INVERTED	2006689	2006708	.	-	.	ID=id3337;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	2006793	2007209	.	+	.	ID=gene1796;Name=YE1819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1819
AM286415.1	EMBL	CDS	2006793	2007209	.	+	0	ID=cds1734;Parent=gene1796;Dbxref=EnsemblGenomes-Gn:YE1819,EnsemblGenomes-Tr:CAL11890,InterPro:IPR017880,InterPro:IPR018004,UniProtKB/TrEMBL:A1JLR6,NCBI_GP:CAL11890.1;Name=CAL11890.1;Note=Weakly similar in parts to Bacteriophage SfV hypothetical protein orf44 SWALL:AAL89446 (EMBL:U82619) (269 aa) fasta scores: E(): 5.9e-09%2C 39.39 38d in 99 aa and Bacteriophage HK620 hypothetical protein HkbK SWALL:Q9AZ05 (EMBL:AF335538) (165 aa) fasta scores: E(): 0.00044%2C 32.69 38d in 104 aa;gbkey=CDS;inference=similar to sequence:INSDC:U82619;product=hypothetical phage-related protein;protein_id=CAL11890.1;transl_table=11
AM286415.1	EMBL	gene	2007722	2008258	.	+	.	ID=gene1797;Name=ail;gbkey=Gene;gene=ail;gene_biotype=protein_coding;locus_tag=YE1820
AM286415.1	EMBL	CDS	2007722	2008258	.	+	0	ID=cds1735;Parent=gene1797;Dbxref=EnsemblGenomes-Gn:YE1820,EnsemblGenomes-Tr:CAL11891,GOA:A1JLR8,InterPro:IPR000758,InterPro:IPR011250,InterPro:IPR017690,InterPro:IPR027385,UniProtKB/TrEMBL:A1JLR8,NCBI_GP:CAL11891.1;Name=CAL11891.1;gbkey=CDS;gene=ail;product=attachment invasion locus protein;protein_id=CAL11891.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2007872	2007898	.	+	.	ID=id3338;Note=PS00694 Enterobacterial virulence outer membrane protein signature 1.;gbkey=misc_feature;gene=ail;inference=protein motif:Prosite:PS00694
AM286415.1	EMBL	sequence_feature	2008229	2008255	.	+	.	ID=id3339;Note=PS00695 Enterobacterial virulence outer membrane protein signature 2.;gbkey=misc_feature;gene=ail;inference=protein motif:Prosite:PS00695
AM286415.1	EMBL	pseudogene	2008303	2008593	.	-	.	ID=gene1798;Name=YE1821;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1821;pseudo=true
AM286415.1	EMBL	CDS	2008303	2008593	.	-	0	ID=cds1736;Parent=gene1798;Note=Similar to the very C-terminus of Yersinia enterocolitica insertion element Orf 2 SWALL:Q56883 (EMBL:M29945) (125 aa) fasta scores: E(): 1.5e-36%2C 98.95 id in 96 aa and to Ralstonia solanacearum ISrso11-transposase orfB protein ISrso11b or rsc2265 or rs01294 SWALL:Q8XX51 (EMBL:AL646069) (269 aa) fasta scores: E(): 4.3e-20%2C 60.22 38d in 88 aa. Note the N-terminus of this CDS has been deleted possibly by the subsequent insertion of the adjacent IS1499 element;gbkey=CDS;inference=similar to sequence:INSDC:M29945;product=transposase (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2008339	2008584	.	-	.	ID=id3340;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 71.1%2C E-value 1.7e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	repeat_region	2008592	2009664	.	+	.	ID=id3341;Note=Partial insertion sequence element IS1400;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	2008592	2008603	.	-	.	ID=id3342;Note=putative inverted repeats for IS1400;gbkey=repeat_region
AM286415.1	EMBL	gene	2008650	2008937	.	+	.	ID=gene1799;Name=trp1400A;gbkey=Gene;gene=trp1400A;gene_biotype=protein_coding;locus_tag=YE1822
AM286415.1	EMBL	CDS	2008650	2008937	.	+	0	ID=cds1737;Parent=gene1799;Dbxref=EnsemblGenomes-Gn:YE1822,EnsemblGenomes-Tr:CAL11893,GOA:A1JLS6,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JLS6,NCBI_GP:CAL11893.1;Name=CAL11893.1;Note=Previously sequenced as Yersinia enterocolitica IS1400 transposase A Trp1400A SWALL:Q9X9H8 (EMBL:AJ132945) (96 aa) fasta scores: E(): 5e-31%2C 95.78 38d in 95 aa. Also similar to many others e.g. Yersinia pestis IS1400 transposase a Trp1400a or Ypo2640 SWALL:Q8ZDD3 (EMBL:AJ414153) (87 aa) fasta scores: E(): 7.9e-22%2C 76.13 id in 88 aa;gbkey=CDS;gene=trp1400A;inference=similar to sequence:INSDC:AJ414153;product=IS1400 transposase A;protein_id=CAL11893.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2008680	2008934	.	+	.	ID=id3343;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 117.9%2C E-value 1.3e-32;gbkey=misc_feature;gene=trp1400A;inference=protein motif:PFAM:PF01527
AM286415.1	EMBL	sequence_feature	2008734	2008799	.	+	.	ID=id3344;Note=Predicted helix-turn-helix motif with score 1311.000%2C SD 3.65 at aa 29-50%2C sequence RTFKDVCREAAISEASYYNWKA;gbkey=misc_feature;gene=trp1400A
AM286415.1	EMBL	pseudogene	2008987	2009664	.	+	.	ID=gene1800;Name=trp1400B;gbkey=Gene;gene=trp1400B;gene_biotype=pseudogene;locus_tag=YE1823;pseudo=true
AM286415.1	EMBL	CDS	2008987	2009664	.	+	0	ID=cds1738;Parent=gene1800;Note=Previously sequenced as Yersinia enterocolitica IS1400 transposase B Trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 3.2e-92%2C 99.55 38d in 226 aa. Also similar to Yersinia pestis putative transposase Ypcd1.94 SWALL:Q9RI05 (EMBL:AL117189) (269 aa) fasta scores: E(): 4.4e-32%2C 42.79 38d in 229 aa. Note the differing predicted start codons for this CDS compared with that previously published. ThIs IS1400 element is a partial sequence. Consequently the predicted product of this CDS lacks the C-terminal 67 residues.;gbkey=CDS;gene=trp1400B;inference=similar to sequence:INSDC:AL117189;product=IS1400 transposase B (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2009263	2009703	.	+	.	ID=id3345;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 78.4%2C E-value 9.8e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	pseudogene	2009678	2010661	.	+	.	ID=gene1801;Name=YE1824;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1824;pseudo=true
AM286415.1	EMBL	CDS	2009678	2010661	.	+	0	ID=cds1739;Parent=gene1801;Note=Similar to the C-terminal proteions of Yersinia pestis pMT1 plasmid hypothetical protein Y1030 or Ypmt1.24C SWALL:O68741 (EMBL:AF074611) (418 aa) fasta scores: E(): 7.1e-14%2C 26.3 38d in 327 aa and Salmonella typhi plasmid pHCM2 hypothetical protein Hcm2.0070C SWALL:Q934Z6 (EMBL:AL513384) (418 aa) fasta scores: E(): 7.1e-14%2C 26.3 38d in 327 aa. It appears that the 5' portion of this CDS has been deleted%2C possibly by the insertion of the adjacent IS1400 element.;gbkey=CDS;inference=similar to sequence:INSDC:AL513384;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	2010666	2011838	.	+	.	ID=gene1802;Name=YE1825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1825
AM286415.1	EMBL	CDS	2010666	2011838	.	+	0	ID=cds1740;Parent=gene1802;Dbxref=EnsemblGenomes-Gn:YE1825,EnsemblGenomes-Tr:CAL11896,GOA:A1JLT0,InterPro:IPR025129,UniProtKB/TrEMBL:A1JLT0,NCBI_GP:CAL11896.1;Name=CAL11896.1;Note=no significant database hits;gbkey=CDS;product=putative DNA-binding protein;protein_id=CAL11896.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2010813	2010878	.	+	.	ID=id3346;Note=Predicted helix-turn-helix motif with score 1093.000%2C SD 2.91 at aa 50-71%2C sequence RNRLAVATLLPVYRETISNNIG;gbkey=misc_feature
AM286415.1	EMBL	repeat_region	2011823	2013065	.	-	.	ID=id3347;Note=Insertion sequence elment IS1329;gbkey=repeat_region
AM286415.1	EMBL	gene	2011853	2012602	.	-	.	ID=gene1803;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=YE1826
AM286415.1	EMBL	CDS	2011853	2012602	.	-	0	ID=cds1741;Parent=gene1803;Dbxref=EnsemblGenomes-Gn:YE1826,EnsemblGenomes-Tr:CAL11897,GOA:A1JK07,InterPro:IPR001584,InterPro:IPR012337,InterPro:IPR025948,UniProtKB/TrEMBL:A1JK07,NCBI_GP:CAL11897.1;Name=CAL11897.1;Note=Previously sequenced as Yersinia enterocolitica transposase B TnpB SWALL:Q9RIG3 (EMBL:AJ251581) (249 aa) fasta scores: E(): 2.3e-104%2C 99.59 38d in 249 aa. Also similar to Xanthomonas axonopodis pv. citri str. 306 ISxac3 transposase Xac3248 SWALL:AAM38092 (EMBL:AE011970) (272 aa) fasta scores: E(): 8e-37%2C 43.72 38d in 247 aa;gbkey=CDS;gene=tnpB;inference=similar to sequence:INSDC:AJ251581;product=transposase B;protein_id=CAL11897.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2011874	2012356	.	-	.	ID=id3348;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 131.6%2C E-value 9.2e-37;gbkey=misc_feature;gene=tnpB;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	2012692	2013024	.	-	.	ID=gene1804;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YE1827
AM286415.1	EMBL	CDS	2012692	2013024	.	-	0	ID=cds1742;Parent=gene1804;Dbxref=EnsemblGenomes-Gn:YE1827,EnsemblGenomes-Tr:CAL11898,GOA:A1JK04,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JK04,NCBI_GP:CAL11898.1;Name=CAL11898.1;Note=Previously sequenced as Yersinia enterocolitica IS1329 transposase A Trp1329A SWALL:Q9X9I2 (EMBL:AJ132945) (110 aa) fasta scores: E(): 1.8e-38%2C 100 38d in 110 aa. Also similar to Shigella dysenteriae transposase InsN for insertion sequence element IS911 SWALL:INSN_SHIDY (SWALL:P39213) (112 aa) fasta scores: E(): 7.6e-13%2C 42.45 id in 106 aa;gbkey=CDS;gene=tnpA;inference=similar to sequence:UniProtKB:P39213;product=IS1329 transposase A;protein_id=CAL11898.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2012725	2012991	.	-	.	ID=id3349;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 56.0%2C E-value 5.5e-14;gbkey=misc_feature;gene=tnpA;inference=protein motif:PFAM:PF01527
AM286415.1	EMBL	sequence_feature	2012869	2012934	.	-	.	ID=id3350;Note=Predicted helix-turn-helix motif with score 1580.000%2C SD 4.57 at aa 23-44%2C sequence YPVTQAAETMNIGLSTLQRWLR;gbkey=misc_feature;gene=tnpA
AM286415.1	EMBL	gene	2013450	2013535	.	-	.	ID=gene1805;Name=tRNA-Leu (TAA);gbkey=Gene;gene=tRNA-Leu (TAA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2013450	2013535	.	-	.	ID=rna82;Parent=gene1805;gbkey=tRNA;gene=tRNA-Leu (TAA);product=tRNA-Leu
AM286415.1	EMBL	exon	2013450	2013535	.	-	.	ID=id3351;Parent=rna82;gbkey=tRNA;gene=tRNA-Leu (TAA);product=tRNA-Leu
AM286415.1	EMBL	gene	2013546	2013619	.	-	.	ID=gene1806;Name=tRNA-Cys (GCA);gbkey=Gene;gene=tRNA-Cys (GCA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2013546	2013619	.	-	.	ID=rna83;Parent=gene1806;gbkey=tRNA;gene=tRNA-Cys (GCA);product=tRNA-Cys
AM286415.1	EMBL	exon	2013546	2013619	.	-	.	ID=id3352;Parent=rna83;gbkey=tRNA;gene=tRNA-Cys (GCA);product=tRNA-Cys
AM286415.1	EMBL	gene	2013670	2013745	.	-	.	ID=gene1807;Name=tRNA-Gly (GCC);gbkey=Gene;gene=tRNA-Gly (GCC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2013670	2013745	.	-	.	ID=rna84;Parent=gene1807;gbkey=tRNA;gene=tRNA-Gly (GCC);product=tRNA-Gly
AM286415.1	EMBL	exon	2013670	2013745	.	-	.	ID=id3353;Parent=rna84;gbkey=tRNA;gene=tRNA-Gly (GCC);product=tRNA-Gly
AM286415.1	EMBL	gene	2013890	2014438	.	-	.	ID=gene1808;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=YE1829
AM286415.1	EMBL	CDS	2013890	2014438	.	-	0	ID=cds1743;Parent=gene1808;Dbxref=EnsemblGenomes-Gn:YE1829,EnsemblGenomes-Tr:CAL11899,GOA:A1JLU9,InterPro:IPR000462,InterPro:IPR004570,InterPro:IPR023762,NCBI_GP:CAL11899.1;Name=CAL11899.1;gbkey=CDS;gene=pgsA;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=CAL11899.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2013905	2014333	.	-	.	ID=id3354;Note=Pfam match to entry PF01066 CDP-OH_P_transf%2CCDP-alcohol phosphatidyltransferase%2C score 148.2%2C E-value 9.1e-42;gbkey=misc_feature;gene=pgsA;inference=protein motif:PFAM:PF01066
AM286415.1	EMBL	sequence_feature	2014310	2014378	.	-	.	ID=id3355;Note=3 probable transmembrane helices predicted for YE1829 by TMHMM2.0 at aa 21-43%2C 73-91 and 154-176;gbkey=misc_feature;gene=pgsA;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2014166	2014222	.	-	.	ID=id3355;Note=3 probable transmembrane helices predicted for YE1829 by TMHMM2.0 at aa 21-43%2C 73-91 and 154-176;gbkey=misc_feature;gene=pgsA;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2013911	2013979	.	-	.	ID=id3355;Note=3 probable transmembrane helices predicted for YE1829 by TMHMM2.0 at aa 21-43%2C 73-91 and 154-176;gbkey=misc_feature;gene=pgsA;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	2014226	2014294	.	-	.	ID=id3356;Note=PS00379 CDP-alcohol phosphatidyltransferases signature.;gbkey=misc_feature;gene=pgsA;inference=protein motif:Prosite:PS00379
AM286415.1	EMBL	gene	2014497	2016329	.	-	.	ID=gene1809;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=YE1830
AM286415.1	EMBL	CDS	2014497	2016329	.	-	0	ID=cds1744;Parent=gene1809;Dbxref=EnsemblGenomes-Gn:YE1830,EnsemblGenomes-Tr:CAL11900,GOA:A1JLV6,InterPro:IPR000305,InterPro:IPR001162,InterPro:IPR001943,InterPro:IPR003583,InterPro:IPR004791,InterPro:IPR010994,InterPro:IPR027299,NCBI_GP:CAL11900.1;Name=CAL11900.1;gbkey=CDS;gene=uvrC;product=excinuclease ABC subunit C;protein_id=CAL11900.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2014509	2014598	.	-	.	ID=id3357;Note=Pfam match to entry PF00633 HHH%2CHelix-hairpin-helix motif%2C score 34.6%2C E-value 1.4e-07;gbkey=misc_feature;gene=uvrC;inference=protein motif:PFAM:PF00633
AM286415.1	EMBL	sequence_feature	2014605	2014694	.	-	.	ID=id3358;Note=Pfam match to entry PF00633 HHH%2CHelix-hairpin-helix motif%2C score 20.9%2C E-value 1.6e-05;gbkey=misc_feature;gene=uvrC;inference=protein motif:PFAM:PF00633
AM286415.1	EMBL	sequence_feature	2015295	2015342	.	-	.	ID=id3359;Note=PS00216 Sugar transport proteins signature 1.;gbkey=misc_feature;gene=uvrC;inference=protein motif:Prosite:PS00216
AM286415.1	EMBL	sequence_feature	2015613	2015720	.	-	.	ID=id3360;Note=Pfam match to entry PF02151 UVR%2C UvrB/uvrC motif %2Cscore 42.1%2C E-value 8.4e-10;gbkey=misc_feature;gene=uvrC;inference=protein motif:PFAM:PF02151
AM286415.1	EMBL	sequence_feature	2016012	2016281	.	-	.	ID=id3361;Note=Pfam match to entry PF01541 Exci_endo_N%2CEndo/excinuclease amino terminal domain%2C score 115.9%2CE-value 4.8e-32;gbkey=misc_feature;gene=uvrC;inference=protein motif:PFAM:PF01541
AM286415.1	EMBL	gene	2016322	2016978	.	-	.	ID=gene1810;Name=uvrY;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;locus_tag=YE1831
AM286415.1	EMBL	CDS	2016322	2016978	.	-	0	ID=cds1745;Parent=gene1810;Dbxref=EnsemblGenomes-Gn:YE1831,EnsemblGenomes-Tr:CAL11901,GOA:A1JLW4,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JLW4,NCBI_GP:CAL11901.1;Name=CAL11901.1;gbkey=CDS;gene=uvrY;product=response regulator protein;protein_id=CAL11901.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2016346	2016543	.	-	.	ID=id3362;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 103.2%2C E-value 3.4e-28;gbkey=misc_feature;gene=uvrY;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	2016409	2016492	.	-	.	ID=id3363;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=uvrY;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	sequence_feature	2016610	2016975	.	-	.	ID=id3364;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 150.6%2C E-value 1.8e-42;gbkey=misc_feature;gene=uvrY;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	2017670	2017894	.	+	.	ID=gene1811;Name=YE1832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1832
AM286415.1	EMBL	CDS	2017670	2017894	.	+	0	ID=cds1746;Parent=gene1811;Dbxref=EnsemblGenomes-Gn:YE1832,EnsemblGenomes-Tr:CAL11902,InterPro:IPR019705,UniProtKB/TrEMBL:A1JLW5,NCBI_GP:CAL11902.1;Name=CAL11902.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11902.1;transl_table=11
AM286415.1	EMBL	gene	2018006	2018344	.	+	.	ID=gene1812;Name=ydgC;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;gene_synonym=glpM;locus_tag=YE1833
AM286415.1	EMBL	CDS	2018006	2018344	.	+	0	ID=cds1747;Parent=gene1812;Dbxref=EnsemblGenomes-Gn:YE1833,EnsemblGenomes-Tr:CAL11903,InterPro:IPR009707,UniProtKB/TrEMBL:A1JLW8,NCBI_GP:CAL11903.1;Name=CAL11903.1;gbkey=CDS;gene=ydgC;product=putative membrane protein;protein_id=CAL11903.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2018009	2018068	.	+	.	ID=id3365;Note=4 probable transmembrane helices predicted for YE1833 by TMHMM2.0 at aa 2-21%2C 25-47%2C 59-81 and 85-107;gbkey=misc_feature;gene=ydgC;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2018078	2018146	.	+	.	ID=id3365;Note=4 probable transmembrane helices predicted for YE1833 by TMHMM2.0 at aa 2-21%2C 25-47%2C 59-81 and 85-107;gbkey=misc_feature;gene=ydgC;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2018180	2018248	.	+	.	ID=id3365;Note=4 probable transmembrane helices predicted for YE1833 by TMHMM2.0 at aa 2-21%2C 25-47%2C 59-81 and 85-107;gbkey=misc_feature;gene=ydgC;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2018258	2018326	.	+	.	ID=id3365;Note=4 probable transmembrane helices predicted for YE1833 by TMHMM2.0 at aa 2-21%2C 25-47%2C 59-81 and 85-107;gbkey=misc_feature;gene=ydgC;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2018375	2018629	.	-	.	ID=gene1813;Name=YE1834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1834
AM286415.1	EMBL	CDS	2018375	2018629	.	-	0	ID=cds1748;Parent=gene1813;Dbxref=EnsemblGenomes-Gn:YE1834,EnsemblGenomes-Tr:CAL11904,UniProtKB/TrEMBL:A1JLX3,NCBI_GP:CAL11904.1;Name=CAL11904.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11904.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2018573	2018626	.	-	.	ID=id3366;Note=3 probable transmembrane helices predicted for YE1834 by TMHMM2.0 at aa 2-19%2C 23-41 and 61-83;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2018507	2018563	.	-	.	ID=id3366;Note=3 probable transmembrane helices predicted for YE1834 by TMHMM2.0 at aa 2-19%2C 23-41 and 61-83;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2018381	2018449	.	-	.	ID=id3366;Note=3 probable transmembrane helices predicted for YE1834 by TMHMM2.0 at aa 2-19%2C 23-41 and 61-83;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	2019471	2019890	.	-	.	ID=gene1814;Name=YE1835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1835
AM286415.1	EMBL	CDS	2019471	2019890	.	-	0	ID=cds1749;Parent=gene1814;Dbxref=EnsemblGenomes-Gn:YE1835,EnsemblGenomes-Tr:CAL11905,GOA:A1JLW6,InterPro:IPR001387,InterPro:IPR010982,UniProtKB/TrEMBL:A1JLW6,NCBI_GP:CAL11905.1;Name=CAL11905.1;Note=Similar to Escherichia coli O157:H7 similar to the regulatory protein DicA encoded by prophage CP-933O z2045 or ecs1765 SWALL:Q8XCA0 (EMBL:AE005343) (135 aa) fasta scores: E(): 5.6e-07%2C 31.96 38d in 122 aa and to Salmonella typhi putative DNA-binding protein Sty1020 SWALL:Q8Z7Y0 (EMBL:AL627268) (134 aa) fasta scores: E(): 7.5e-07%2C 28.8 38d in 125 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627268;product=putative DNA-binding protein;protein_id=CAL11905.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2019684	2019845	.	-	.	ID=id3367;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 37.7%2C E-value 1.8e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	2019753	2019818	.	-	.	ID=id3368;Note=Predicted helix-turn-helix motif with score 1782.000%2C SD 5.26 at aa 25-46%2C sequence VNKSGLARICGISPQAAGRWFT;gbkey=misc_feature
AM286415.1	EMBL	gene	2020221	2020403	.	+	.	ID=gene1815;Name=YE1836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1836
AM286415.1	EMBL	CDS	2020221	2020403	.	+	0	ID=cds1750;Parent=gene1815;Dbxref=EnsemblGenomes-Gn:YE1836,EnsemblGenomes-Tr:CAL11906,UniProtKB/TrEMBL:A1JLW9,NCBI_GP:CAL11906.1;Name=CAL11906.1;Note=Similar to Bacteriophage P27 hypothetical 7.7 kDa protein SWALL:Q8W652 (EMBL:AJ298298) (67 aa) fasta scores: E(): 0.002%2C 45.23 38d in 42 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ298298;product=hypothetical phage-related protein;protein_id=CAL11906.1;transl_table=11
AM286415.1	EMBL	gene	2020829	2021248	.	+	.	ID=gene1816;Name=YE1837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1837
AM286415.1	EMBL	CDS	2020829	2021248	.	+	0	ID=cds1751;Parent=gene1816;Dbxref=EnsemblGenomes-Gn:YE1837,EnsemblGenomes-Tr:CAL11907,GOA:A1JLX0,InterPro:IPR010534,UniProtKB/TrEMBL:A1JLX0,NCBI_GP:CAL11907.1;Name=CAL11907.1;Note=Similar to many bacteriophage antitermination proteins including: Bacteriophage APSE-1 probable antitermination protein Q 5 SWALL:REGQ_BPAPS (SWALL:Q9T1U3) (148 aa) fasta scores: E(): 6.4e-26%2C 56.8 id in 125 aa and to Yersinia pestis probable phage antitermination protein Q Ypo1234 SWALL:Q8ZGQ3 (EMBL:AJ414147) (159 aa) fasta scores: E(): 1.4e-36%2C68.46 38d in 130 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9T1U3;product=probable phage antitermination protein;protein_id=CAL11907.1;transl_table=11
AM286415.1	EMBL	gene	2021426	2021602	.	-	.	ID=gene1817;Name=YE1838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1838
AM286415.1	EMBL	CDS	2021426	2021602	.	-	0	ID=cds1752;Parent=gene1817;Dbxref=EnsemblGenomes-Gn:YE1838,EnsemblGenomes-Tr:CAL11908,InterPro:IPR019689,UniProtKB/TrEMBL:A1JLX1,NCBI_GP:CAL11908.1;Name=CAL11908.1;Note=Similar to several proteins of undefined function including: Escherichia coli hypothetical protein YdcX or b1445 SWALL:YDCX_ECOLI (SWALL:P76109) (82 aa) fasta scores: E(): 0.00022%2C 44.23 38d in 52 aa and Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YjdO or b4128.1 or z5731 or ecs5110.1 SWALL:YJDO_ECOLI (SWALL:P58038) (57 aa) fasta scores: E(): 1.7e-06%2C 51.92 id in 52 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76109;product=putative membrane protein;protein_id=CAL11908.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2021525	2021593	.	-	.	ID=id3369;Note=2 probable transmembrane helices predicted for YE1838 by TMHMM2.0 at aa 4-26 and 33-55;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2021438	2021506	.	-	.	ID=id3369;Note=2 probable transmembrane helices predicted for YE1838 by TMHMM2.0 at aa 4-26 and 33-55;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2021829	2022005	.	+	.	ID=gene1818;Name=YE1839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1839
AM286415.1	EMBL	CDS	2021829	2022005	.	+	0	ID=cds1753;Parent=gene1818;Dbxref=EnsemblGenomes-Gn:YE1839,EnsemblGenomes-Tr:CAL11912,UniProtKB/TrEMBL:A1JLX2,NCBI_GP:CAL11912.1;Name=CAL11912.1;Note=Similar to Bacteriophage PS34 gp13 SWALL:O80287 (EMBL:AJ011580) (67 aa) fasta scores: E(): 3.5e-11%2C 56.36 id in 55 aa and to Bacteriophage PS119 gp13 13 SWALL:O80291 (EMBL:AJ011581) (67 aa) fasta scores: E(): 3.5e-11%2C 56.36 38d in 55 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ011581;product=conserved hypothetical phage protein;protein_id=CAL11912.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2021847	2021900	.	+	.	ID=id3370;Note=2 probable transmembrane helices predicted for YE1839 by TMHMM2.0 at aa 7-24 and 29-48;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2021913	2021972	.	+	.	ID=id3370;Note=2 probable transmembrane helices predicted for YE1839 by TMHMM2.0 at aa 7-24 and 29-48;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2022007	2022489	.	+	.	ID=gene1819;Name=YE1840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1840
AM286415.1	EMBL	CDS	2022007	2022489	.	+	0	ID=cds1754;Parent=gene1819;Dbxref=EnsemblGenomes-Gn:YE1840,EnsemblGenomes-Tr:CAL11915,GOA:A1JLW2,InterPro:IPR002196,InterPro:IPR023346,InterPro:IPR023347,UniProtKB/TrEMBL:A1JLW2,NCBI_GP:CAL11915.1;Name=CAL11915.1;Note=Similar to many bacteriophage lysozymes including: Bacteriophage Mu lysozyme lys or 22 SWALL:LYCV_BPMU (SWALL:Q9T1X2) (171 aa) fasta scores: E(): 1e-23%2C 49.66 id in 149 aa%2C Bacteriophage PS119 lysozyme 19 SWALL:LYCV_BPPS1 (SWALL:O80292) (167 aa) fasta scores: E(): 3.1e-35%2C 57.14 38d in 161 aa and Bacteriophage PS34 lysozyme 19 SWALL:LYCV_BPPS3 (SWALL:O80288) (167 aa) fasta scores: E(): 5e-34%2C 55.9 38d in 161 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9T1X2;product=bacteriophage lysozyme;protein_id=CAL11915.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2022139	2022462	.	+	.	ID=id3371;Note=Pfam match to entry PF00959 Phage_lysozyme%2C Phage lysozyme%2C score 107.9%2C E-value 1.3e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF00959
AM286415.1	EMBL	sequence_feature	2022546	2022614	.	-	.	ID=id3372;Note=1 probable transmembrane helix predicted for YE1841 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2022862	2023746	.	+	.	ID=gene1820;Name=YE1842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1842
AM286415.1	EMBL	CDS	2022862	2023746	.	+	0	ID=cds1755;Parent=gene1820;Dbxref=EnsemblGenomes-Gn:YE1842,EnsemblGenomes-Tr:CAL11920,GOA:A1JLY3,InterPro:IPR000073,InterPro:IPR029058,UniProtKB/TrEMBL:A1JLY3,NCBI_GP:CAL11920.1;Name=CAL11920.1;Note=Similar to many including: Pseudomonas fragi lipase precursor SWALL:LIP_PSEFR (SWALL:P08658) (277 aa) fasta scores: E(): 5.4e-54%2C 54.27 38d in 269 aa and Proteus vulgaris alkaline lipase SWALL:Q52614 (EMBL:U33845) (290 aa) fasta scores: E(): 3.9e-59%2C 58.7 38d in 293 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P08658;product=lipase;protein_id=CAL11920.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2022919	2023689	.	+	.	ID=id3373;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 40.4%2C E-value 2.7e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00561
AM286415.1	EMBL	gene	2024540	2025412	.	+	.	ID=gene1821;Name=YE1843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1843
AM286415.1	EMBL	CDS	2024540	2025412	.	+	0	ID=cds1756;Parent=gene1821;Dbxref=EnsemblGenomes-Gn:YE1843,EnsemblGenomes-Tr:CAL11923,GOA:A1JLY7,InterPro:IPR000748,InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR018496,InterPro:IPR020103,UniProtKB/TrEMBL:A1JLY7,NCBI_GP:CAL11923.1;Name=CAL11923.1;Note=Similar to Bacillus subtilis ribosomal large subunit pseudouridine synthase B rluB SWALL:RLUB_BACSU (SWALL:P35159) (229 aa) fasta scores: E(): 7.7e-20%2C 37.44 id in 227 aa. Also similar over the entire range to Salmonella typhi putative pseudouridine synthase Sty4410 SWALL:Q8Z1V3 (EMBL:AL627282) (289 aa) fasta scores: E(): 1.5e-86%2C 79.31 38d in 290 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P35159;product=conserved hypothetical protein;protein_id=CAL11923.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2024558	2024695	.	+	.	ID=id3374;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 49.6%2C E-value 4.5e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF01479
AM286415.1	EMBL	sequence_feature	2024741	2025124	.	+	.	ID=id3375;Note=Pfam match to entry PF00849 PseudoU_synth_2%2C RNA pseudouridylate synthase%2C score 94.5%2C E-value 1.4e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF00849
AM286415.1	EMBL	sequence_feature	2024849	2024893	.	+	.	ID=id3376;Note=PS01149 Rsu family of pseudouridine synthase signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01149
AM286415.1	EMBL	pseudogene	2025784	2026059	.	-	.	ID=gene1822;Name=YE1844;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE1844;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	2025511	2025774	.	-	.	ID=gene1822;Name=YE1844;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE1844;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	2025976	2026059	.	-	0	ID=cds1757;Parent=gene1822;Dbxref=PSEUDO:CAL11925.1;Note=This CDS is a pseudogene from which the central region has been deleted. The coding sequence also contains a stop codon. The N- and C-termini of the predicted product of this CDS are similar to the very N- and C-termini of many sodium/glutamate symporters including: Escherichia coli sodium/glutamate symport carrier protein GltS or GltC or b3653 SWALL:GLTS_ECOLI (SWALL:P19933) blast scores: E(): 6e-34%2C score: 361 83 38d and to Yersinia pestis sodium/glutamate symport carrier protein GltS or Ypo0035 SWALL:Q8ZJQ7 (EMBL:AJ414141) blast scores: E(): 6e-36%2C score: 378 74 38d;gbkey=CDS;inference=similar to sequence:UniProtKB:P19933;product=sodium/glutamate symport carrier protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2025784	2025972	.	-	0	ID=cds1757;Parent=gene1822;Dbxref=PSEUDO:CAL11925.1;Note=This CDS is a pseudogene from which the central region has been deleted. The coding sequence also contains a stop codon. The N- and C-termini of the predicted product of this CDS are similar to the very N- and C-termini of many sodium/glutamate symporters including: Escherichia coli sodium/glutamate symport carrier protein GltS or GltC or b3653 SWALL:GLTS_ECOLI (SWALL:P19933) blast scores: E(): 6e-34%2C score: 361 83 38d and to Yersinia pestis sodium/glutamate symport carrier protein GltS or Ypo0035 SWALL:Q8ZJQ7 (EMBL:AJ414141) blast scores: E(): 6e-36%2C score: 378 74 38d;gbkey=CDS;inference=similar to sequence:UniProtKB:P19933;product=sodium/glutamate symport carrier protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2025511	2025774	.	-	0	ID=cds1757;Parent=gene1822;Dbxref=PSEUDO:CAL11925.1;Note=This CDS is a pseudogene from which the central region has been deleted. The coding sequence also contains a stop codon. The N- and C-termini of the predicted product of this CDS are similar to the very N- and C-termini of many sodium/glutamate symporters including: Escherichia coli sodium/glutamate symport carrier protein GltS or GltC or b3653 SWALL:GLTS_ECOLI (SWALL:P19933) blast scores: E(): 6e-34%2C score: 361 83 38d and to Yersinia pestis sodium/glutamate symport carrier protein GltS or Ypo0035 SWALL:Q8ZJQ7 (EMBL:AJ414141) blast scores: E(): 6e-36%2C score: 378 74 38d;gbkey=CDS;inference=similar to sequence:UniProtKB:P19933;product=sodium/glutamate symport carrier protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2025652	2025720	.	-	.	ID=id3377;Note=2 probable transmembrane helices predicted for YE1844 by TMHMM2.0 at aa 21-43 and 53-75;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2025556	2025624	.	-	.	ID=id3377;Note=2 probable transmembrane helices predicted for YE1844 by TMHMM2.0 at aa 21-43 and 53-75;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2025625	2025780	.	-	.	ID=id3378;Note=Pfam match to entry PF03616 Glt_symporter%2CSodium/glutamate symporter%2C score 124.5%2C E-value 3.8e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF03616
AM286415.1	EMBL	gene	2026785	2027630	.	-	.	ID=gene1823;Name=YE1845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1845
AM286415.1	EMBL	CDS	2026785	2027630	.	-	0	ID=cds1758;Parent=gene1823;Dbxref=EnsemblGenomes-Gn:YE1845,EnsemblGenomes-Tr:CAL11926,GOA:A1JLZ3,InterPro:IPR000620,UniProtKB/TrEMBL:A1JLZ3,NCBI_GP:CAL11926.1;Name=CAL11926.1;Note=Similar to many proteins of undefined function including: Rhizobium loti hypothetical protein Mll3062 SWALL:Q98H24 (EMBL:AP003001) (281 aa) fasta scores: E(): 6.7e-39%2C 43.06 38d in 281 aa and Brucella melitensis transporter%2C Dme family Bmei1244 SWALL:Q8YGB5 (EMBL:AE009563) (281 aa) fasta scores: E(): 3.5e-34%2C 39 id in 282 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003001;product=putative inner membrane protein;protein_id=CAL11926.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2026791	2027171	.	-	.	ID=id3379;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 44.4%2C E-value 1.6e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	2027475	2027543	.	-	.	ID=id3380;Note=9 probable transmembrane helices predicted for YE1845 by TMHMM2.0 at aa 5-23%2C 30-52%2C 57-76%2C 89-108%2C113-132%2C 145-167%2C 177-194%2C 207-229 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	2027403	2027462	.	-	.	ID=id3380;Note=9 probable transmembrane helices predicted for YE1845 by TMHMM2.0 at aa 5-23%2C 30-52%2C 57-76%2C 89-108%2C113-132%2C 145-167%2C 177-194%2C 207-229 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	2027307	2027366	.	-	.	ID=id3380;Note=9 probable transmembrane helices predicted for YE1845 by TMHMM2.0 at aa 5-23%2C 30-52%2C 57-76%2C 89-108%2C113-132%2C 145-167%2C 177-194%2C 207-229 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	2027235	2027294	.	-	.	ID=id3380;Note=9 probable transmembrane helices predicted for YE1845 by TMHMM2.0 at aa 5-23%2C 30-52%2C 57-76%2C 89-108%2C113-132%2C 145-167%2C 177-194%2C 207-229 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	2027130	2027198	.	-	.	ID=id3380;Note=9 probable transmembrane helices predicted for YE1845 by TMHMM2.0 at aa 5-23%2C 30-52%2C 57-76%2C 89-108%2C113-132%2C 145-167%2C 177-194%2C 207-229 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	2027049	2027102	.	-	.	ID=id3380;Note=9 probable transmembrane helices predicted for YE1845 by TMHMM2.0 at aa 5-23%2C 30-52%2C 57-76%2C 89-108%2C113-132%2C 145-167%2C 177-194%2C 207-229 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	2026944	2027012	.	-	.	ID=id3380;Note=9 probable transmembrane helices predicted for YE1845 by TMHMM2.0 at aa 5-23%2C 30-52%2C 57-76%2C 89-108%2C113-132%2C 145-167%2C 177-194%2C 207-229 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	2026863	2026931	.	-	.	ID=id3380;Note=9 probable transmembrane helices predicted for YE1845 by TMHMM2.0 at aa 5-23%2C 30-52%2C 57-76%2C 89-108%2C113-132%2C 145-167%2C 177-194%2C 207-229 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	2026797	2026850	.	-	.	ID=id3380;Note=9 probable transmembrane helices predicted for YE1845 by TMHMM2.0 at aa 5-23%2C 30-52%2C 57-76%2C 89-108%2C113-132%2C 145-167%2C 177-194%2C 207-229 and 234-256;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	2027235	2027591	.	-	.	ID=id3381;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 23.1%2C E-value 0.00043;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	2027865	2028122	.	+	.	ID=gene1824;Name=YE1846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1846
AM286415.1	EMBL	CDS	2027865	2028122	.	+	0	ID=cds1759;Parent=gene1824;Dbxref=EnsemblGenomes-Gn:YE1846,EnsemblGenomes-Tr:CAL11927,UniProtKB/TrEMBL:A1JLZ9,NCBI_GP:CAL11927.1;Name=CAL11927.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11927.1;transl_table=11
AM286415.1	EMBL	gene	2028284	2029324	.	+	.	ID=gene1825;Name=YE1847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1847
AM286415.1	EMBL	CDS	2028284	2029324	.	+	0	ID=cds1760;Parent=gene1825;Dbxref=EnsemblGenomes-Gn:YE1847,EnsemblGenomes-Tr:CAL11928,GOA:A1JLZ5,InterPro:IPR006685,InterPro:IPR010920,InterPro:IPR011014,InterPro:IPR011066,UniProtKB/TrEMBL:A1JLZ5,NCBI_GP:CAL11928.1;Name=CAL11928.1;Note=Similar to many proteins of undefined function including: Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YnaI or b1330 or z2437 or ecs1912 SWALL:YNAI_ECOLI (SWALL:P77253) (343 aa) fasta scores: E(): 1.7e-83%2C 60.4 38d in 346 aa and Aquifex aeolicus hypothetical protein Aq_812 SWALL:Y812_AQUAE (SWALL:O66994) (368 aa) fasta scores: E(): 1e-20%2C 26.92 id in 338 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77253;product=putative inner membrane protein;protein_id=CAL11928.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2028308	2028376	.	+	.	ID=id3382;Note=5 probable transmembrane helices predicted for YE1847 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 112-134 and 141-160;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2028404	2028472	.	+	.	ID=id3382;Note=5 probable transmembrane helices predicted for YE1847 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 112-134 and 141-160;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2028491	2028559	.	+	.	ID=id3382;Note=5 probable transmembrane helices predicted for YE1847 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 112-134 and 141-160;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2028617	2028685	.	+	.	ID=id3382;Note=5 probable transmembrane helices predicted for YE1847 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 112-134 and 141-160;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2028704	2028763	.	+	.	ID=id3382;Note=5 probable transmembrane helices predicted for YE1847 by TMHMM2.0 at aa 9-31%2C 41-63%2C 70-92%2C 112-134 and 141-160;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	2028638	2029258	.	+	.	ID=id3383;Note=Pfam match to entry PF00924 MS_channel%2CMechanosensitive ion channel%2C score 232.7%2C E-value 3.5e-67;gbkey=misc_feature;inference=protein motif:PFAM:PF00924
AM286415.1	EMBL	gene	2029506	2030141	.	+	.	ID=gene1826;Name=YE1848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1848
AM286415.1	EMBL	CDS	2029506	2030141	.	+	0	ID=cds1761;Parent=gene1826;Dbxref=EnsemblGenomes-Gn:YE1848,EnsemblGenomes-Tr:CAL11929,GOA:A1JLX6,InterPro:IPR004045,InterPro:IPR010987,InterPro:IPR012336,UniProtKB/TrEMBL:A1JLX6,NCBI_GP:CAL11929.1;Name=CAL11929.1;Note=Similar to many proposed glutathione-S transferases including: Escherichia coli hypothetical GST-like protein YfcF or b2301 SWALL:YFCF_ECOLI (SWALL:P77544) (214 aa) fasta scores: E(): 2.4e-45%2C 60.28 38d in 214 aa and Salmonella typhi putative glutathione-S transferase Sty2578 SWALL:Q8Z514 (EMBL:AL627274) (214 aa) fasta scores: E(): 7.2e-47%2C 60.66 38d in 211 aa. Also weakly similar to Eukaryotic transferases including: Mus musculus glutathione S-transferase theta 1 GstT1 SWALL:GTT1_MOUSE (SWALL:Q64471) (239 aa) fasta scores: E(): 1.6e-06%2C 30 38d in 130 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q64471;product=putative transferase;protein_id=CAL11929.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2029551	2029748	.	+	.	ID=id3384;Note=Pfam match to entry PF02798 GST_N%2C Glutathione S-transferase%2C N-terminal domain%2C score 33.3%2C E-value 2.1e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF02798
AM286415.1	EMBL	gene	2030211	2030759	.	+	.	ID=gene1827;Name=YE1849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1849
AM286415.1	EMBL	CDS	2030211	2030759	.	+	0	ID=cds1762;Parent=gene1827;Dbxref=EnsemblGenomes-Gn:YE1849,EnsemblGenomes-Tr:CAL11930,GOA:A1JLY0,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JLY0,NCBI_GP:CAL11930.1;Name=CAL11930.1;Note=Similar to Proteus mirabilis putative acetyl transferase SWALL:O86434 (EMBL:AJ000084) (185 aa) fasta scores: E(): 1.9e-34%2C 53.14 38d in 175 aa and Streptomyces coelicolor putative acetyltranferase Sco7447 or Sc5c11.04C SWALL:Q9L168 (EMBL:AL158060) (183 aa) fasta scores: E(): 6.3e-27%2C 47.45 38d in 177 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL158060;product=putative acetyl transferase;protein_id=CAL11930.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2030403	2030657	.	+	.	ID=id3385;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 31.5%2C E-value 1.3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	2031267	2031500	.	+	.	ID=gene1828;Name=YE1850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1850
AM286415.1	EMBL	CDS	2031267	2031500	.	+	0	ID=cds1763;Parent=gene1828;Dbxref=EnsemblGenomes-Gn:YE1850,EnsemblGenomes-Tr:CAL11931,UniProtKB/TrEMBL:A1JLX7,NCBI_GP:CAL11931.1;Name=CAL11931.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11931.1;transl_table=11
AM286415.1	EMBL	gene	2032223	2032612	.	+	.	ID=gene1829;Name=YE1853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1853
AM286415.1	EMBL	CDS	2032223	2032612	.	+	0	ID=cds1764;Parent=gene1829;Dbxref=EnsemblGenomes-Gn:YE1853,EnsemblGenomes-Tr:CAL11932,InterPro:IPR007374,InterPro:IPR009326,InterPro:IPR015947,UniProtKB/TrEMBL:A1JLY1,NCBI_GP:CAL11932.1;Name=CAL11932.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11932.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2032385	2032414	.	+	.	ID=id3386;Note=PS00659 Glycosyl hydrolases family 5 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00659
AM286415.1	EMBL	gene	2032730	2032972	.	-	.	ID=gene1830;Name=YE1854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1854
AM286415.1	EMBL	CDS	2032730	2032972	.	-	0	ID=cds1765;Parent=gene1830;Dbxref=EnsemblGenomes-Gn:YE1854,EnsemblGenomes-Tr:CAL11933,InterPro:IPR009950,UniProtKB/TrEMBL:A1JLV9,NCBI_GP:CAL11933.1;Name=CAL11933.1;Note=Similar to several proteins of undefined function including: Yersinia pestis hypothetical protein Ypo1694 SWALL:Q8ZFK9 (EMBL:AJ414150) (79 aa) fasta scores: E(): 1.9e-24%2C 76.25 38d in 80 aa%2C Salmonella typhi hypothetical protein Sty1982 SWALL:Q8Z661 (EMBL:AL627272) (79 aa) fasta scores: E(): 6.8e-16%2C 55.69 38d in 79 aa and Escherichia coli hypothetical protein YebV or b1836 SWALL:YEBV_ECOLI (SWALL:P76274) (78 aa) fasta scores: E(): 7.9e-15%2C 53.94 38d in 76 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76274;product=conserved hypothetical protein;protein_id=CAL11933.1;transl_table=11
AM286415.1	EMBL	gene	2033085	2034794	.	-	.	ID=gene1831;Name=YE1855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1855
AM286415.1	EMBL	CDS	2033085	2034794	.	-	0	ID=cds1766;Parent=gene1831;Dbxref=EnsemblGenomes-Gn:YE1855,EnsemblGenomes-Tr:CAL11934,GOA:A1JLW1,InterPro:IPR000014,InterPro:IPR000160,InterPro:IPR000700,InterPro:IPR001610,InterPro:IPR013655,InterPro:IPR013656,InterPro:IPR013767,InterPro:IPR029787,UniProtKB/TrEMBL:A1JLW1,NCBI_GP:CAL11934.1;Name=CAL11934.1;Note=Similar over the entire length to Rhizobium sp. hypothetical protein Y4lL SWALL:Y4LL_RHISN (SWALL:P55552) (827 aa) fasta scores: E(): 6e-22%2C 26.66 38d in 540 aa. Similar in the C-terminus to several proposed two-component regulatory proteins e.g. Synechocystis sp. regulatory components of sensory transduction system Sll1673 SWALL:P72790 (EMBL:D90900) (452 aa) fasta scores: E(): 1.1e-25%2C 46.31 38d in 190 aa%2C and to Synechocystis sp. pled pled or slr0829 SWALL:Q55414 (EMBL:D64003) (829 aa) fasta scores: E(): 3.2e-23%2C 31.92 38d in 451 aa and Pseudomonas aeruginosa probable two-component response regulator Pa3702 SWALL:Q9HXT9 (EMBL:AE004789) (347 aa) fasta scores: E(): 3.2e-23%2C 44.08 38d in 186 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P55552;product=conserved hypothetical protein;protein_id=CAL11934.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2033112	2033615	.	-	.	ID=id3387;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 213.9%2C E-value 1.6e-61;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	2033655	2033783	.	-	.	ID=id3388;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 31.9%2C E-value 9.6e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	2033874	2033999	.	-	.	ID=id3389;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 16.2%2C E-value 0.00047;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	2034213	2034365	.	-	.	ID=id3390;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 10.1%2C E-value 0.024;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	2034390	2034518	.	-	.	ID=id3391;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 31.2%2C E-value 1.6e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	2034543	2034737	.	-	.	ID=id3392;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 30.6%2C E-value 2.3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	gene	2035017	2036027	.	-	.	ID=gene1832;Name=YE1856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1856
AM286415.1	EMBL	CDS	2035017	2036027	.	-	0	ID=cds1767;Parent=gene1832;Dbxref=EnsemblGenomes-Gn:YE1856,EnsemblGenomes-Tr:CAL11935,InterPro:IPR007893,InterPro:IPR008966,UniProtKB/TrEMBL:A1JLY8,NCBI_GP:CAL11935.1;Name=CAL11935.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11935.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2035941	2036009	.	-	.	ID=id3393;Note=1 probable transmembrane helix predicted for YE1856 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2036058	2038499	.	-	.	ID=gene1833;Name=YE1857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1857
AM286415.1	EMBL	CDS	2036058	2038499	.	-	0	ID=cds1768;Parent=gene1833;Dbxref=EnsemblGenomes-Gn:YE1857,EnsemblGenomes-Tr:CAL11936,GOA:A1JM00,InterPro:IPR000015,InterPro:IPR025949,UniProtKB/TrEMBL:A1JM00,NCBI_GP:CAL11936.1;Name=CAL11936.1;gbkey=CDS;product=probable outer membrane usher protein;protein_id=CAL11936.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2036103	2038406	.	-	.	ID=id3394;Note=Pfam match to entry PF00577 Usher%2C Fimbrial Usher protein%2C score -185.7%2C E-value 4.1e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00577
AM286415.1	EMBL	gene	2038586	2039335	.	-	.	ID=gene1834;Name=YE1858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1858
AM286415.1	EMBL	CDS	2038586	2039335	.	-	0	ID=cds1769;Parent=gene1834;Dbxref=EnsemblGenomes-Gn:YE1858,EnsemblGenomes-Tr:CAL11937,GOA:A1JM04,InterPro:IPR008962,InterPro:IPR016147,UniProtKB/TrEMBL:A1JM04,NCBI_GP:CAL11937.1;Name=CAL11937.1;gbkey=CDS;product=putative chaperone protein;protein_id=CAL11937.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2039249	2039317	.	-	.	ID=id3395;Note=1 probable transmembrane helix predicted for YE1858 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2039382	2039939	.	-	.	ID=gene1835;Name=YE1859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1859
AM286415.1	EMBL	CDS	2039382	2039939	.	-	0	ID=cds1770;Parent=gene1835;Dbxref=EnsemblGenomes-Gn:YE1859,EnsemblGenomes-Tr:CAL11938,InterPro:IPR007893,UniProtKB/TrEMBL:A1JM09,NCBI_GP:CAL11938.1;Name=CAL11938.1;Note=Also similar to YE1861 27.473 38dentity in 182 aa overlap and YE1860 34.463 38dentity in 177 aa overlap;gbkey=CDS;product=putative exported protein;protein_id=CAL11938.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2039859	2039927	.	-	.	ID=id3396;Note=1 probable transmembrane helix predicted for YE1859 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2039950	2040507	.	-	.	ID=gene1836;Name=YE1860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1860
AM286415.1	EMBL	CDS	2039950	2040507	.	-	0	ID=cds1771;Parent=gene1836;Dbxref=EnsemblGenomes-Gn:YE1860,EnsemblGenomes-Tr:CAL11939,InterPro:IPR007893,UniProtKB/TrEMBL:A1JM14,NCBI_GP:CAL11939.1;Name=CAL11939.1;Note=Also similar to YE1861 35.795 38dentity in 176 aa overlap and YE1859 34.831 38dentity in 178 aa overlap;gbkey=CDS;product=putative exported protein;protein_id=CAL11939.1;transl_table=11
AM286415.1	EMBL	gene	2040513	2041067	.	-	.	ID=gene1837;Name=YE1861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1861
AM286415.1	EMBL	CDS	2040513	2041067	.	-	0	ID=cds1772;Parent=gene1837;Dbxref=EnsemblGenomes-Gn:YE1861,EnsemblGenomes-Tr:CAL11940,InterPro:IPR007893,UniProtKB/TrEMBL:A1JM17,NCBI_GP:CAL11940.1;Name=CAL11940.1;Note=Also similar to YE1860 35.795 38dentity in 176 aa overlap and YE1859 26.519 38dentity in 181 aa overlap;gbkey=CDS;product=putative exported protein;protein_id=CAL11940.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2040930	2040962	.	-	.	ID=id3397;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2041377	2042801	.	-	.	ID=gene1838;Name=YE1862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1862
AM286415.1	EMBL	CDS	2041377	2042801	.	-	0	ID=cds1773;Parent=gene1838;Dbxref=EnsemblGenomes-Gn:YE1862,EnsemblGenomes-Tr:CAL11941,GOA:A1JM21,InterPro:IPR001411,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JM21,NCBI_GP:CAL11941.1;Name=CAL11941.1;Note=Similar to many membrane transport proteins including: Rhizobium loti probable transmembrane efflux protein Mr1142 SWALL:Q98L80 (EMBL:AP002996) (490 aa) fasta scores: E(): 4.8e-81%2C 53.47 38d in 475 aa and Streptomyces glaucescens tetracenomycin C resistance and export protein TcmA SWALL:TCMA_STRGA (SWALL:P39886) (538 aa) fasta scores: E(): 6.8e-26%2C 29.29 38d in 413 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P39886;product=putative membrane transport protein;protein_id=CAL11941.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2041386	2042744	.	-	.	ID=id3398;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -105.5%2C E-value 0.00039;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	2042571	2042630	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	2042466	2042534	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	2042400	2042456	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	2042295	2042363	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	2042217	2042285	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	2042112	2042180	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	2042040	2042084	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	2041914	2041982	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	2041803	2041871	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	2041725	2041784	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	2041656	2041715	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	2041500	2041568	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	2041398	2041457	.	-	.	ID=id3399;Note=13 probable transmembrane helices predicted for YE1862 by TMHMM2.0 at aa 21-43%2C 58-77%2C 90-112%2C 116-134%2C147-169%2C 173-195%2C 208-230%2C 240-254%2C 274-296%2C 311-333%2C340-359%2C 363-382 and 412-434;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	gene	2042930	2043850	.	+	.	ID=gene1839;Name=YE1863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1863
AM286415.1	EMBL	CDS	2042930	2043850	.	+	0	ID=cds1774;Parent=gene1839;Dbxref=EnsemblGenomes-Gn:YE1863,EnsemblGenomes-Tr:CAL11942,GOA:A1JM31,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JM31,NCBI_GP:CAL11942.1;Name=CAL11942.1;Note=Similar to many LysR-family transcriptional regulatory proteins including: Pseudomonas putida transcriptional activator protein NahR SWALL:NAHR_PSEPU (SWALL:P10183) (300 aa) fasta scores: E(): 2.5e-19%2C 31.1 id in 299 aa%2C Rhizobium meliloti putative transcription regulator protein R00218 or Smc02893 SWALL:Q92SY0 (EMBL:AL591782) (308 aa) fasta scores: E(): 2.3e-69%2C67.23 38d in 296 aa%2C and to Rhizobium meliloti nodulation protein D I NodD1 or ra0476 or sma0870 SWALL:NOD1_RHIME (SWALL:P03031) (308 aa) fasta scores: E(): 5e-17%2C 33.22 id in 295 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P10183;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL11942.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2042945	2043124	.	+	.	ID=id3400;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 67.3%2C E-value 2.1e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2042984	2043049	.	+	.	ID=id3401;Note=Predicted helix-turn-helix motif with score 1516.000%2C SD 4.35 at aa 19-40%2C sequence GSVVRAAQRLGLSPSAMSRALA;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	2042987	2043079	.	+	.	ID=id3402;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	2043197	2043814	.	+	.	ID=id3403;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 84.5%2C E-value 1.4e-22;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	2043863	2046493	.	-	.	ID=gene1840;Name=YE1864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1864
AM286415.1	EMBL	CDS	2043863	2046493	.	-	0	ID=cds1775;Parent=gene1840;Dbxref=EnsemblGenomes-Gn:YE1864,EnsemblGenomes-Tr:CAL11943,InterPro:IPR003399,UniProtKB/TrEMBL:A1JM37,NCBI_GP:CAL11943.1;Name=CAL11943.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11943.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2044082	2044237	.	-	.	ID=id3404;Note=Pfam match to entry PF02470 mce%2C mce related protein%2C score 18.6%2C E-value 5.2e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF02470
AM286415.1	EMBL	sequence_feature	2045942	2046439	.	-	.	ID=id3405;Note=Pfam match to entry PF02470 mce%2C mce related protein%2C score -2.1%2C E-value 0.00058;gbkey=misc_feature;inference=protein motif:PFAM:PF02470
AM286415.1	EMBL	sequence_feature	2046377	2046436	.	-	.	ID=id3406;Note=1 probable transmembrane helix predicted for YE1864 by TMHMM2.0 at aa 20-39;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2046462	2047709	.	-	.	ID=gene1841;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=YE1865
AM286415.1	EMBL	CDS	2046462	2047709	.	-	0	ID=cds1776;Parent=gene1841;Dbxref=EnsemblGenomes-Gn:YE1865,EnsemblGenomes-Tr:CAL11944,InterPro:IPR005219,InterPro:IPR007498,InterPro:IPR011031,UniProtKB/TrEMBL:A1JM44,NCBI_GP:CAL11944.1;Name=CAL11944.1;gbkey=CDS;gene=yebS;product=putative membrane protein;protein_id=CAL11944.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2047476	2047544	.	-	.	ID=id3407;Note=8 probable transmembrane helices predicted for YE1865 by TMHMM2.0 at aa 56-78%2C 103-125%2C 146-163%2C 173-195%2C253-275%2C 301-323%2C 344-366 and 371-393;gbkey=misc_feature;gene=yebS;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	2047335	2047403	.	-	.	ID=id3407;Note=8 probable transmembrane helices predicted for YE1865 by TMHMM2.0 at aa 56-78%2C 103-125%2C 146-163%2C 173-195%2C253-275%2C 301-323%2C 344-366 and 371-393;gbkey=misc_feature;gene=yebS;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	2047221	2047274	.	-	.	ID=id3407;Note=8 probable transmembrane helices predicted for YE1865 by TMHMM2.0 at aa 56-78%2C 103-125%2C 146-163%2C 173-195%2C253-275%2C 301-323%2C 344-366 and 371-393;gbkey=misc_feature;gene=yebS;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	2047125	2047193	.	-	.	ID=id3407;Note=8 probable transmembrane helices predicted for YE1865 by TMHMM2.0 at aa 56-78%2C 103-125%2C 146-163%2C 173-195%2C253-275%2C 301-323%2C 344-366 and 371-393;gbkey=misc_feature;gene=yebS;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	2046885	2046953	.	-	.	ID=id3407;Note=8 probable transmembrane helices predicted for YE1865 by TMHMM2.0 at aa 56-78%2C 103-125%2C 146-163%2C 173-195%2C253-275%2C 301-323%2C 344-366 and 371-393;gbkey=misc_feature;gene=yebS;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	2046741	2046809	.	-	.	ID=id3407;Note=8 probable transmembrane helices predicted for YE1865 by TMHMM2.0 at aa 56-78%2C 103-125%2C 146-163%2C 173-195%2C253-275%2C 301-323%2C 344-366 and 371-393;gbkey=misc_feature;gene=yebS;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	2046612	2046680	.	-	.	ID=id3407;Note=8 probable transmembrane helices predicted for YE1865 by TMHMM2.0 at aa 56-78%2C 103-125%2C 146-163%2C 173-195%2C253-275%2C 301-323%2C 344-366 and 371-393;gbkey=misc_feature;gene=yebS;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	2046531	2046599	.	-	.	ID=id3407;Note=8 probable transmembrane helices predicted for YE1865 by TMHMM2.0 at aa 56-78%2C 103-125%2C 146-163%2C 173-195%2C253-275%2C 301-323%2C 344-366 and 371-393;gbkey=misc_feature;gene=yebS;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	2047950	2048447	.	+	.	ID=gene1842;Name=YE1866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1866
AM286415.1	EMBL	CDS	2047950	2048447	.	+	0	ID=cds1777;Parent=gene1842;Dbxref=EnsemblGenomes-Gn:YE1866,EnsemblGenomes-Tr:CAL11945,InterPro:IPR003018,InterPro:IPR029016,UniProtKB/TrEMBL:A1JM46,NCBI_GP:CAL11945.1;Name=CAL11945.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11945.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2048016	2048405	.	+	.	ID=id3408;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 28.3%2C E-value 1.1e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01590
AM286415.1	EMBL	gene	2048543	2049271	.	+	.	ID=gene1843;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=YE1867
AM286415.1	EMBL	CDS	2048543	2049271	.	+	0	ID=cds1778;Parent=gene1843;Dbxref=EnsemblGenomes-Gn:YE1867,EnsemblGenomes-Tr:CAL11946,GOA:A1JM56,InterPro:IPR016103,InterPro:IPR023529,UniProtKB/TrEMBL:A1JM56,NCBI_GP:CAL11946.1;Name=CAL11946.1;gbkey=CDS;gene=proQ;product=ProP effector homologue;protein_id=CAL11946.1;transl_table=11
AM286415.1	EMBL	gene	2049291	2051366	.	+	.	ID=gene1844;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=YE1868
AM286415.1	EMBL	CDS	2049291	2051366	.	+	0	ID=cds1779;Parent=gene1844;Dbxref=EnsemblGenomes-Gn:YE1868,EnsemblGenomes-Tr:CAL11947,GOA:A1JM67,InterPro:IPR001478,InterPro:IPR004447,InterPro:IPR005151,InterPro:IPR020992,InterPro:IPR029045,UniProtKB/TrEMBL:A1JM67,NCBI_GP:CAL11947.1;Name=CAL11947.1;gbkey=CDS;gene=prc;product=tail-specific protease precursor;protein_id=CAL11947.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2049996	2050256	.	+	.	ID=id3409;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF)%2C score 63.2%2C E-value 3.7e-16;gbkey=misc_feature;gene=prc;inference=protein motif:PFAM:PF00595
AM286415.1	EMBL	sequence_feature	2050611	2050718	.	+	.	ID=id3410;Note=Pfam match to entry PF02692 IRBP%2CInterphotoreceptor retinoid-binding protein%2C score 15.0%2CE-value 0.00014;gbkey=misc_feature;gene=prc;inference=protein motif:PFAM:PF02692
AM286415.1	EMBL	gene	2051661	2052542	.	+	.	ID=gene1845;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=YE1869
AM286415.1	EMBL	CDS	2051661	2052542	.	+	0	ID=cds1780;Parent=gene1845;Dbxref=EnsemblGenomes-Gn:YE1869,EnsemblGenomes-Tr:CAL11948,GOA:A1JM73,InterPro:IPR001915,InterPro:IPR022919,NCBI_GP:CAL11948.1;Name=CAL11948.1;gbkey=CDS;gene=htpX;product=putative heat shock protein;protein_id=CAL11948.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2051673	2051741	.	+	.	ID=id3411;Note=4 probable transmembrane helices predicted for YE1869 by TMHMM2.0 at aa 5-27%2C 32-54%2C 158-180 and 195-217;gbkey=misc_feature;gene=htpX;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2051754	2051822	.	+	.	ID=id3411;Note=4 probable transmembrane helices predicted for YE1869 by TMHMM2.0 at aa 5-27%2C 32-54%2C 158-180 and 195-217;gbkey=misc_feature;gene=htpX;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2052132	2052200	.	+	.	ID=id3411;Note=4 probable transmembrane helices predicted for YE1869 by TMHMM2.0 at aa 5-27%2C 32-54%2C 158-180 and 195-217;gbkey=misc_feature;gene=htpX;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2052243	2052311	.	+	.	ID=id3411;Note=4 probable transmembrane helices predicted for YE1869 by TMHMM2.0 at aa 5-27%2C 32-54%2C 158-180 and 195-217;gbkey=misc_feature;gene=htpX;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	2051901	2052518	.	+	.	ID=id3412;Note=Pfam match to entry PF01435 Peptidase_M48%2CPeptidase family M48%2C score 212.3%2C E-value 4.8e-61;gbkey=misc_feature;gene=htpX;inference=protein motif:PFAM:PF01435
AM286415.1	EMBL	sequence_feature	2052435	2052458	.	+	.	ID=id3413;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=htpX;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	repeat_region	2052673	2054055	.	-	.	ID=id3414;Note=Insertion sequence element IS1667;gbkey=repeat_region
AM286415.1	EMBL	gene	2052949	2053968	.	-	.	ID=gene1846;Name=YE1870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1870
AM286415.1	EMBL	CDS	2052949	2053968	.	-	0	ID=cds1781;Parent=gene1846;Dbxref=EnsemblGenomes-Gn:YE1870,EnsemblGenomes-Tr:CAL11949,GOA:A1JM79,InterPro:IPR002525,InterPro:IPR003346,UniProtKB/TrEMBL:A1JM79,NCBI_GP:CAL11949.1;Name=CAL11949.1;Note=Similar to Pseudomonas putida transposase Tnpa1 protein SWALL:Q9K2X6 (EMBL:AJ288911) (344 aa) fasta scores: E(): 5.3e-56%2C 46.68 38d in 332 aa and to Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 3e-50%2C 42.47 38d in 332 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=putative transposase for IS1667;protein_id=CAL11949.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2053081	2053410	.	-	.	ID=id3415;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 98.4%2C E-value 9.5e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	sequence_feature	2053501	2053779	.	-	.	ID=id3416;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 30.3%2C E-value 2.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	gene	2054157	2054585	.	-	.	ID=gene1847;Name=YE1871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1871
AM286415.1	EMBL	CDS	2054157	2054585	.	-	0	ID=cds1782;Parent=gene1847;Dbxref=EnsemblGenomes-Gn:YE1871,EnsemblGenomes-Tr:CAL11950,UniProtKB/TrEMBL:A1JM83,NCBI_GP:CAL11950.1;Name=CAL11950.1;Note=Similar to Escherichia coli O157:H7 Z0638 lipoprotein or ecs0546 SWALL:Q8XD08 (EMBL:AE005230) (140 aa) fasta scores: E(): 1.1e-18%2C 48.93 38d in 141 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005230;product=putative lipoprotein;protein_id=CAL11950.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2054532	2054564	.	-	.	ID=id3417;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2054582	2054731	.	-	.	ID=gene1848;Name=YE1872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1872
AM286415.1	EMBL	CDS	2054582	2054731	.	-	0	ID=cds1783;Parent=gene1848;Dbxref=EnsemblGenomes-Gn:YE1872,EnsemblGenomes-Tr:CAL11951,UniProtKB/TrEMBL:A1JM87,NCBI_GP:CAL11951.1;Name=CAL11951.1;Note=no significant database hits;gbkey=CDS;product=putative exported protein;protein_id=CAL11951.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2054648	2054716	.	-	.	ID=id3418;Note=1 probable transmembrane helix predicted for YE1872 by TMHMM2.0 at aa 4-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2054736	2055374	.	-	.	ID=gene1849;Name=YE1873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1873
AM286415.1	EMBL	CDS	2054736	2055374	.	-	0	ID=cds1784;Parent=gene1849;Dbxref=EnsemblGenomes-Gn:YE1873,EnsemblGenomes-Tr:CAL11952,InterPro:IPR005594,UniProtKB/TrEMBL:A1JM91,NCBI_GP:CAL11952.1;Name=CAL11952.1;Note=Similar in the C-terminus to many YadA-like exproted proteins including: to Yersinia enterocolitica invasin precursor YadA or YopA or inva or yop1 SWALL:YADA_YEREN (SWALL:P31489) (455 aa) fasta scores: E(): 0.028%2C 24.42 38d in 131 aa%2C Yersinia pestis putative exported protein Ypo1387 SWALL:Q8ZGB6 (EMBL:AJ414148) (364 aa) fasta scores: E(): 6.7e-05%2C 26.15 38d in 195 aa and Yersinia pseudotuberculosis invasin precursor YadA or YopA or inva or yop1 SWALL:YADA_YERPS (SWALL:P10858) (434 aa) fasta scores: E(): 0.011%2C 26.51 38d in 132 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P31489;product=putative exported protein;protein_id=CAL11952.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2054739	2054972	.	-	.	ID=id3419;Note=Pfam match to entry PF03895 YadA%2C YadA-like C-terminal region%2C score 52.4%2C E-value 6.6e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF03895
AM286415.1	EMBL	gene	2055684	2056085	.	+	.	ID=gene1850;Name=YE1874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1874
AM286415.1	EMBL	CDS	2055684	2056085	.	+	0	ID=cds1785;Parent=gene1850;Dbxref=EnsemblGenomes-Gn:YE1874,EnsemblGenomes-Tr:CAL11953,GOA:A1JM94,UniProtKB/TrEMBL:A1JM94,NCBI_GP:CAL11953.1;Name=CAL11953.1;Note=no significant database hits;gbkey=CDS;product=putative DNA-binding protein;protein_id=CAL11953.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2055786	2055851	.	+	.	ID=id3420;Note=Predicted helix-turn-helix motif with score 1256.000%2C SD 3.46 at aa 35-56%2C sequence EKETELADLMAANRSTINKYLN;gbkey=misc_feature
AM286415.1	EMBL	gene	2056110	2057477	.	-	.	ID=gene1851;Name=YE1875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1875
AM286415.1	EMBL	CDS	2056110	2057477	.	-	0	ID=cds1786;Parent=gene1851;Dbxref=EnsemblGenomes-Gn:YE1875,EnsemblGenomes-Tr:CAL11954,GOA:A1JM99,InterPro:IPR001411,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JM99,NCBI_GP:CAL11954.1;Name=CAL11954.1;gbkey=CDS;product=putative transport protein;protein_id=CAL11954.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2057352	2057420	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2057256	2057324	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2057154	2057222	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2057076	2057144	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2056989	2057057	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2056917	2056976	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2056797	2056856	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2056731	2056784	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2056605	2056673	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2056494	2056562	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2056407	2056475	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2056128	2056196	.	-	.	ID=id3421;Note=12 probable transmembrane helices predicted for YE1875 by TMHMM2.0 at aa 20-42%2C 52-74%2C 86-108%2C 112-134%2C141-163%2C 168-187%2C 208-227%2C 232-249%2C 269-291%2C 306-328%2C335-357 and 428-450;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2056167	2056199	.	-	.	ID=id3422;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2057124	2057429	.	-	.	ID=id3423;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 20.1%2C E-value 3.1e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	2057802	2058968	.	+	.	ID=gene1852;Name=ogl;gbkey=Gene;gene=ogl;gene_biotype=protein_coding;locus_tag=YE1876
AM286415.1	EMBL	CDS	2057802	2058968	.	+	0	ID=cds1787;Parent=gene1852;Dbxref=EnsemblGenomes-Gn:YE1876,EnsemblGenomes-Tr:CAL11955,GOA:A1JMA5,InterPro:IPR015943,InterPro:IPR027946,PDB:3PE7,UniProtKB/TrEMBL:A1JMA5,NCBI_GP:CAL11955.1;Name=CAL11955.1;gbkey=CDS;gene=ogl;product=oligogalacturonate lyase;protein_id=CAL11955.1;transl_table=11
AM286415.1	EMBL	gene	2059155	2059946	.	+	.	ID=gene1853;Name=kdgR;gbkey=Gene;gene=kdgR;gene_biotype=protein_coding;locus_tag=YE1877
AM286415.1	EMBL	CDS	2059155	2059946	.	+	0	ID=cds1788;Parent=gene1853;Dbxref=EnsemblGenomes-Gn:YE1877,EnsemblGenomes-Tr:CAL11956,GOA:A1JMA8,InterPro:IPR005471,InterPro:IPR011991,InterPro:IPR014757,InterPro:IPR029016,UniProtKB/TrEMBL:A1JMA8,NCBI_GP:CAL11956.1;Name=CAL11956.1;gbkey=CDS;gene=kdgR;product=IclR-family transcriptional regulatory protein;protein_id=CAL11956.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2059248	2059313	.	+	.	ID=id3424;Note=Predicted helix-turn-helix motif with score 1732.000%2C SD 5.09 at aa 32-53%2C sequence IGITELSQRVMMPKSTVYRFLQ;gbkey=misc_feature;gene=kdgR
AM286415.1	EMBL	sequence_feature	2059362	2059919	.	+	.	ID=id3425;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 289.0%2C E-value 3.9e-84;gbkey=misc_feature;gene=kdgR;inference=protein motif:PFAM:PF01614
AM286415.1	EMBL	gene	2060222	2061073	.	+	.	ID=gene1854;Name=b0867;gbkey=Gene;gene=b0867;gene_biotype=protein_coding;locus_tag=YE1878
AM286415.1	EMBL	CDS	2060222	2061073	.	+	0	ID=cds1789;Parent=gene1854;Dbxref=EnsemblGenomes-Gn:YE1878,EnsemblGenomes-Tr:CAL11957,GOA:A1JMB3,InterPro:IPR002477,InterPro:IPR002502,UniProtKB/TrEMBL:A1JMB3,NCBI_GP:CAL11957.1;Name=CAL11957.1;gbkey=CDS;gene=b0867;product=probable N-acetylmuramoyl-L-alanine amidase;protein_id=CAL11957.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2060237	2060269	.	+	.	ID=id3426;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=b0867;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2060345	2060788	.	+	.	ID=id3427;Note=Pfam match to entry PF01510 Amidase_2%2CN-acetylmuramoyl-L-alanine amidase%2C score 148.8%2C E-value 6.3e-42;gbkey=misc_feature;gene=b0867;inference=protein motif:PFAM:PF01510
AM286415.1	EMBL	gene	2061299	2062696	.	-	.	ID=gene1855;Name=gltP;gbkey=Gene;gene=gltP;gene_biotype=protein_coding;locus_tag=YE1879
AM286415.1	EMBL	CDS	2061299	2062696	.	-	0	ID=cds1790;Parent=gene1855;Dbxref=EnsemblGenomes-Gn:YE1879,EnsemblGenomes-Tr:CAL11958,GOA:A1JMC3,InterPro:IPR001991,UniProtKB/TrEMBL:A1JMC3,NCBI_GP:CAL11958.1;Name=CAL11958.1;gbkey=CDS;gene=gltP;product=putative transport protein;protein_id=CAL11958.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2061362	2062606	.	-	.	ID=id3428;Note=Pfam match to entry PF00375 SDF%2CSodium:dicarboxylate symporter family%2C score 363.7%2CE-value 1.3e-106;gbkey=misc_feature;gene=gltP;inference=protein motif:PFAM:PF00375
AM286415.1	EMBL	sequence_feature	2062631	2062684	.	-	.	ID=id3429;Note=9 probable transmembrane helices predicted for YE1879 by TMHMM2.0 at aa 5-22%2C 35-53%2C 73-95%2C 107-129%2C185-207%2C 262-284%2C 342-364%2C 371-393 and 397-419;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	2062538	2062594	.	-	.	ID=id3429;Note=9 probable transmembrane helices predicted for YE1879 by TMHMM2.0 at aa 5-22%2C 35-53%2C 73-95%2C 107-129%2C185-207%2C 262-284%2C 342-364%2C 371-393 and 397-419;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	2062412	2062480	.	-	.	ID=id3429;Note=9 probable transmembrane helices predicted for YE1879 by TMHMM2.0 at aa 5-22%2C 35-53%2C 73-95%2C 107-129%2C185-207%2C 262-284%2C 342-364%2C 371-393 and 397-419;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	2062310	2062378	.	-	.	ID=id3429;Note=9 probable transmembrane helices predicted for YE1879 by TMHMM2.0 at aa 5-22%2C 35-53%2C 73-95%2C 107-129%2C185-207%2C 262-284%2C 342-364%2C 371-393 and 397-419;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	2062076	2062144	.	-	.	ID=id3429;Note=9 probable transmembrane helices predicted for YE1879 by TMHMM2.0 at aa 5-22%2C 35-53%2C 73-95%2C 107-129%2C185-207%2C 262-284%2C 342-364%2C 371-393 and 397-419;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	2061845	2061913	.	-	.	ID=id3429;Note=9 probable transmembrane helices predicted for YE1879 by TMHMM2.0 at aa 5-22%2C 35-53%2C 73-95%2C 107-129%2C185-207%2C 262-284%2C 342-364%2C 371-393 and 397-419;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	2061605	2061673	.	-	.	ID=id3429;Note=9 probable transmembrane helices predicted for YE1879 by TMHMM2.0 at aa 5-22%2C 35-53%2C 73-95%2C 107-129%2C185-207%2C 262-284%2C 342-364%2C 371-393 and 397-419;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	2061518	2061586	.	-	.	ID=id3429;Note=9 probable transmembrane helices predicted for YE1879 by TMHMM2.0 at aa 5-22%2C 35-53%2C 73-95%2C 107-129%2C185-207%2C 262-284%2C 342-364%2C 371-393 and 397-419;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	2061440	2061508	.	-	.	ID=id3429;Note=9 probable transmembrane helices predicted for YE1879 by TMHMM2.0 at aa 5-22%2C 35-53%2C 73-95%2C 107-129%2C185-207%2C 262-284%2C 342-364%2C 371-393 and 397-419;gbkey=misc_feature;gene=gltP;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	2062909	2063457	.	-	.	ID=gene1856;Name=YE1880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1880
AM286415.1	EMBL	CDS	2062909	2063457	.	-	0	ID=cds1791;Parent=gene1856;Dbxref=EnsemblGenomes-Gn:YE1880,EnsemblGenomes-Tr:CAL11959,InterPro:IPR007404,InterPro:IPR016956,UniProtKB/TrEMBL:A1JMC9,NCBI_GP:CAL11959.1;Name=CAL11959.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL11959.1;transl_table=11
AM286415.1	EMBL	gene	2063815	2064513	.	-	.	ID=gene1857;Name=YE1881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1881
AM286415.1	EMBL	CDS	2063815	2064513	.	-	0	ID=cds1792;Parent=gene1857;Dbxref=EnsemblGenomes-Gn:YE1881,EnsemblGenomes-Tr:CAL11960,InterPro:IPR009331,UniProtKB/TrEMBL:A1JMD1,NCBI_GP:CAL11960.1;Name=CAL11960.1;gbkey=CDS;product=putative exported protein;protein_id=CAL11960.1;transl_table=11
AM286415.1	EMBL	gene	2064819	2066111	.	-	.	ID=gene1858;Name=YE1882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1882
AM286415.1	EMBL	CDS	2064819	2066111	.	-	0	ID=cds1793;Parent=gene1858;Dbxref=EnsemblGenomes-Gn:YE1882,EnsemblGenomes-Tr:CAL11961,GOA:A1JMD4,InterPro:IPR006059,UniProtKB/TrEMBL:A1JMD4,NCBI_GP:CAL11961.1;Name=CAL11961.1;gbkey=CDS;product=putative sugar-binding protein;protein_id=CAL11961.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2064867	2066006	.	-	.	ID=id3430;Note=Pfam match to entry PF01547 SBP_bac_1%2C Bacterial extracellular solute-binding protein%2C score 118.9%2CE-value 6.3e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF01547
AM286415.1	EMBL	gene	2066127	2067254	.	-	.	ID=gene1859;Name=YE1883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1883
AM286415.1	EMBL	CDS	2066127	2067254	.	-	0	ID=cds1794;Parent=gene1859;Dbxref=EnsemblGenomes-Gn:YE1883,EnsemblGenomes-Tr:CAL11962,GOA:A1JMD6,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR013611,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMD6,NCBI_GP:CAL11962.1;Name=CAL11962.1;gbkey=CDS;product=putative sugar ABC transporter;protein_id=CAL11962.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2066607	2067167	.	-	.	ID=id3431;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 182.5%2C E-value 4.3e-52;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2066808	2066852	.	-	.	ID=id3432;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	2067268	2068107	.	-	.	ID=gene1860;Name=YE1884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1884
AM286415.1	EMBL	CDS	2067268	2068107	.	-	0	ID=cds1795;Parent=gene1860;Dbxref=EnsemblGenomes-Gn:YE1884,EnsemblGenomes-Tr:CAL11963,GOA:A1JMD7,InterPro:IPR000515,UniProtKB/TrEMBL:A1JMD7,NCBI_GP:CAL11963.1;Name=CAL11963.1;gbkey=CDS;product=putative sugar ABC transporter (permease);protein_id=CAL11963.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2068006	2068074	.	-	.	ID=id3433;Note=6 probable transmembrane helices predicted for YE1884 by TMHMM2.0 at aa 12-34%2C 78-100%2C 107-129%2C 144-163%2C184-206 and 241-263;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2067808	2067876	.	-	.	ID=id3433;Note=6 probable transmembrane helices predicted for YE1884 by TMHMM2.0 at aa 12-34%2C 78-100%2C 107-129%2C 144-163%2C184-206 and 241-263;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2067721	2067789	.	-	.	ID=id3433;Note=6 probable transmembrane helices predicted for YE1884 by TMHMM2.0 at aa 12-34%2C 78-100%2C 107-129%2C 144-163%2C184-206 and 241-263;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2067619	2067678	.	-	.	ID=id3433;Note=6 probable transmembrane helices predicted for YE1884 by TMHMM2.0 at aa 12-34%2C 78-100%2C 107-129%2C 144-163%2C184-206 and 241-263;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2067490	2067558	.	-	.	ID=id3433;Note=6 probable transmembrane helices predicted for YE1884 by TMHMM2.0 at aa 12-34%2C 78-100%2C 107-129%2C 144-163%2C184-206 and 241-263;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2067319	2067387	.	-	.	ID=id3433;Note=6 probable transmembrane helices predicted for YE1884 by TMHMM2.0 at aa 12-34%2C 78-100%2C 107-129%2C 144-163%2C184-206 and 241-263;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	2067412	2067624	.	-	.	ID=id3434;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 52.2%2C E-value 7.5e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	2067535	2067621	.	-	.	ID=id3435;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	2068178	2069068	.	-	.	ID=gene1861;Name=YE1885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1885
AM286415.1	EMBL	CDS	2068178	2069068	.	-	0	ID=cds1796;Parent=gene1861;Dbxref=EnsemblGenomes-Gn:YE1885,EnsemblGenomes-Tr:CAL11964,GOA:A1JME8,InterPro:IPR000515,UniProtKB/TrEMBL:A1JME8,NCBI_GP:CAL11964.1;Name=CAL11964.1;gbkey=CDS;product=putative ABC sugar transporter (permease);protein_id=CAL11964.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2068982	2069050	.	-	.	ID=id3436;Note=7 probable transmembrane helices predicted for YE1885 by TMHMM2.0 at aa 7-29%2C 69-91%2C 104-126%2C 153-175%2C196-215%2C 225-247 and 256-278;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	2068796	2068864	.	-	.	ID=id3436;Note=7 probable transmembrane helices predicted for YE1885 by TMHMM2.0 at aa 7-29%2C 69-91%2C 104-126%2C 153-175%2C196-215%2C 225-247 and 256-278;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	2068691	2068759	.	-	.	ID=id3436;Note=7 probable transmembrane helices predicted for YE1885 by TMHMM2.0 at aa 7-29%2C 69-91%2C 104-126%2C 153-175%2C196-215%2C 225-247 and 256-278;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	2068544	2068612	.	-	.	ID=id3436;Note=7 probable transmembrane helices predicted for YE1885 by TMHMM2.0 at aa 7-29%2C 69-91%2C 104-126%2C 153-175%2C196-215%2C 225-247 and 256-278;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	2068424	2068483	.	-	.	ID=id3436;Note=7 probable transmembrane helices predicted for YE1885 by TMHMM2.0 at aa 7-29%2C 69-91%2C 104-126%2C 153-175%2C196-215%2C 225-247 and 256-278;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	2068328	2068396	.	-	.	ID=id3436;Note=7 probable transmembrane helices predicted for YE1885 by TMHMM2.0 at aa 7-29%2C 69-91%2C 104-126%2C 153-175%2C196-215%2C 225-247 and 256-278;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	2068235	2068303	.	-	.	ID=id3436;Note=7 probable transmembrane helices predicted for YE1885 by TMHMM2.0 at aa 7-29%2C 69-91%2C 104-126%2C 153-175%2C196-215%2C 225-247 and 256-278;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	2068328	2068549	.	-	.	ID=id3437;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 79.4%2C E-value 4.7e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	2068460	2068546	.	-	.	ID=id3438;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	2069109	2070776	.	-	.	ID=gene1862;Name=kdgC;gbkey=Gene;gene=kdgC;gene_biotype=protein_coding;gene_synonym=pelW;locus_tag=YE1886
AM286415.1	EMBL	CDS	2069109	2070776	.	-	0	ID=cds1797;Parent=gene1862;Dbxref=EnsemblGenomes-Gn:YE1886,EnsemblGenomes-Tr:CAL11965,GOA:A1JMF0,InterPro:IPR010702,UniProtKB/TrEMBL:A1JMF0,NCBI_GP:CAL11965.1;Name=CAL11965.1;gbkey=CDS;gene=kdgC;product=exopolygalacturonate lyase;protein_id=CAL11965.1;transl_table=11
AM286415.1	EMBL	gene	2071104	2071865	.	-	.	ID=gene1863;Name=kduD1;gbkey=Gene;gene=kduD1;gene_biotype=protein_coding;locus_tag=YE1887
AM286415.1	EMBL	CDS	2071104	2071865	.	-	0	ID=cds1798;Parent=gene1863;Dbxref=EnsemblGenomes-Gn:YE1887,EnsemblGenomes-Tr:CAL11966,GOA:A1JMF3,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR011286,InterPro:IPR016040,InterPro:IPR020904,UniProtKB/TrEMBL:A1JMF3,NCBI_GP:CAL11966.1;Name=CAL11966.1;gbkey=CDS;gene=kduD1;product=2-deoxy-D-gluconate 3-dehydrogenase;protein_id=CAL11966.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2071116	2071841	.	-	.	ID=id3439;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 300.4%2C E-value 1.4e-87;gbkey=misc_feature;gene=kduD1;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	sequence_feature	2071347	2071433	.	-	.	ID=id3440;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=kduD1;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	gene	2071977	2072813	.	-	.	ID=gene1864;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=YE1888
AM286415.1	EMBL	CDS	2071977	2072813	.	-	0	ID=cds1799;Parent=gene1864;Dbxref=EnsemblGenomes-Gn:YE1888,EnsemblGenomes-Tr:CAL11967,GOA:A1JMF5,InterPro:IPR007045,InterPro:IPR011051,InterPro:IPR021120,InterPro:IPR027447,InterPro:IPR027449,NCBI_GP:CAL11967.1;Name=CAL11967.1;Note=Highly similar to Erwinia chrysanthemi 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI SWALL:KDUI_ERWCH (SWALL:Q05529) (278 aa) fasta scores: E(): 9.8e-96%2C 80.93 38d in 278 aa and Yersinia pestis 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase KduI or Ypo1725 SWALL:Q8ZFH8 (EMBL:AJ414150) (278 aa) fasta scores: E(): 7.5e-104%2C 90.28 38d in 278 aa;gbkey=CDS;gene=kduI;inference=similar to sequence:UniProtKB:Q05529;product=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase;protein_id=CAL11967.1;transl_table=11
AM286415.1	EMBL	gene	2073051	2073383	.	+	.	ID=gene1865;Name=kdgF;gbkey=Gene;gene=kdgF;gene_biotype=protein_coding;locus_tag=YE1889
AM286415.1	EMBL	CDS	2073051	2073383	.	+	0	ID=cds1800;Parent=gene1865;Dbxref=EnsemblGenomes-Gn:YE1889,EnsemblGenomes-Tr:CAL11968,InterPro:IPR011051,InterPro:IPR013096,InterPro:IPR014710,InterPro:IPR025499,UniProtKB/TrEMBL:A1JMF7,NCBI_GP:CAL11968.1;Name=CAL11968.1;gbkey=CDS;gene=kdgF;product=pectin degradation protein;protein_id=CAL11968.1;transl_table=11
AM286415.1	EMBL	gene	2073494	2074159	.	-	.	ID=gene1866;Name=YE1890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1890
AM286415.1	EMBL	CDS	2073494	2074159	.	-	0	ID=cds1801;Parent=gene1866;Dbxref=EnsemblGenomes-Gn:YE1890,EnsemblGenomes-Tr:CAL11969,GOA:A1JMF9,InterPro:IPR006439,InterPro:IPR023198,InterPro:IPR023214,UniProtKB/TrEMBL:A1JMF9,NCBI_GP:CAL11969.1;Name=CAL11969.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11969.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2073578	2074141	.	-	.	ID=id3441;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 113.9%2C E-value 2.1e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	2074409	2074963	.	+	.	ID=gene1867;Name=yfeE;gbkey=Gene;gene=yfeE;gene_biotype=protein_coding;locus_tag=YE1891
AM286415.1	EMBL	CDS	2074409	2074963	.	+	0	ID=cds1802;Parent=gene1867;Dbxref=EnsemblGenomes-Gn:YE1891,EnsemblGenomes-Tr:CAL11970,InterPro:IPR025229,UniProtKB/TrEMBL:A1JMG1,NCBI_GP:CAL11970.1;Name=CAL11970.1;gbkey=CDS;gene=yfeE;product=putative yfeABCD locus regulator;protein_id=CAL11970.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2074451	2074519	.	+	.	ID=id3442;Note=4 probable transmembrane helices predicted for YE1891 by TMHMM2.0 at aa 15-37%2C 44-66%2C 86-108 and 153-175;gbkey=misc_feature;gene=yfeE;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2074538	2074606	.	+	.	ID=id3442;Note=4 probable transmembrane helices predicted for YE1891 by TMHMM2.0 at aa 15-37%2C 44-66%2C 86-108 and 153-175;gbkey=misc_feature;gene=yfeE;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2074664	2074732	.	+	.	ID=id3442;Note=4 probable transmembrane helices predicted for YE1891 by TMHMM2.0 at aa 15-37%2C 44-66%2C 86-108 and 153-175;gbkey=misc_feature;gene=yfeE;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2074865	2074933	.	+	.	ID=id3442;Note=4 probable transmembrane helices predicted for YE1891 by TMHMM2.0 at aa 15-37%2C 44-66%2C 86-108 and 153-175;gbkey=misc_feature;gene=yfeE;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2075357	2076247	.	+	.	ID=gene1868;Name=YE1892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1892
AM286415.1	EMBL	CDS	2075357	2076247	.	+	0	ID=cds1803;Parent=gene1868;Dbxref=EnsemblGenomes-Gn:YE1892,EnsemblGenomes-Tr:CAL11971,GOA:A1JMG3,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JMG3,NCBI_GP:CAL11971.1;Name=CAL11971.1;gbkey=CDS;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL11971.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2075372	2075551	.	+	.	ID=id3443;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 62.2%2C E-value 7.5e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2075414	2075506	.	+	.	ID=id3444;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	2075618	2076238	.	+	.	ID=id3445;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 31.0%2C E-value 1.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	2076244	2077725	.	-	.	ID=gene1869;Name=YE1893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1893
AM286415.1	EMBL	CDS	2076244	2077725	.	-	0	ID=cds1804;Parent=gene1869;Dbxref=EnsemblGenomes-Gn:YE1893,EnsemblGenomes-Tr:CAL11972,GOA:A1JMG6,InterPro:IPR003702,InterPro:IPR017821,InterPro:IPR026888,UniProtKB/TrEMBL:A1JMG6,NCBI_GP:CAL11972.1;Name=CAL11972.1;gbkey=CDS;product=putative 4-hydroxybutyrate coenzyme A transferase;protein_id=CAL11972.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2076256	2077725	.	-	.	ID=id3446;Note=Pfam match to entry PF02550 AcetylCoA_hydro%2CAcetyl-CoA hydrolase/transferase%2C score 849.5%2C E-value 7.2e-253;gbkey=misc_feature;inference=protein motif:PFAM:PF02550
AM286415.1	EMBL	gene	2077751	2078536	.	-	.	ID=gene1870;Name=YE1894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1894
AM286415.1	EMBL	CDS	2077751	2078536	.	-	0	ID=cds1805;Parent=gene1870;Dbxref=EnsemblGenomes-Gn:YE1894,EnsemblGenomes-Tr:CAL11973,GOA:A1JMG8,InterPro:IPR001753,InterPro:IPR014748,InterPro:IPR018376,InterPro:IPR029045,UniProtKB/TrEMBL:A1JMG8,NCBI_GP:CAL11973.1;Name=CAL11973.1;Note=Similar to Clostridium acetobutylicum 3-hydroxybutyryl-CoA dehydratase%2C involved in fatty acid metabolism%2C Crt or cac2712 SWALL:CRT_CLOAB (SWALL:P52046) (261 aa) fasta scores: E(): 2.7e-18%2C 31.72 38d in 249 aa. Also similar to several other putative hydratases e.g. Bacillus halodurans enoyl CoA hydratase YngF or PhaA or bh0201 SWALL:Q9Z9V2 (EMBL:AB011837) (257 aa) fasta scores: E(): 3.3e-21%2C 31.55 38d in 263 aa. Also highly similar to Escherichia coli hypothetical protein YgfG or b2919 SWALL:YGFG_ECOLI (SWALL:P52045) (261 aa) fasta scores: E(): 3.9e-87%2C 85.38 38d in 260 aa.;gbkey=CDS;inference=similar to sequence:UniProtKB:P52046;product=possible dehydratase;protein_id=CAL11973.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2077988	2078494	.	-	.	ID=id3447;Note=Pfam match to entry PF00378 ECH%2C Enoyl-CoA hydratase/isomerase family%2C score 92.2%2C E-value 6.9e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF00378
AM286415.1	EMBL	sequence_feature	2078177	2078239	.	-	.	ID=id3448;Note=PS00166 Enoyl-CoA hydratase/isomerase signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00166
AM286415.1	EMBL	gene	2078550	2079545	.	-	.	ID=gene1871;Name=YE1894A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1894A
AM286415.1	EMBL	CDS	2078550	2079545	.	-	0	ID=cds1806;Parent=gene1871;Dbxref=EnsemblGenomes-Gn:YE1894A,EnsemblGenomes-Tr:CAL11975,GOA:A1JMH0,InterPro:IPR003593,InterPro:IPR003661,InterPro:IPR005129,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMH0,NCBI_GP:CAL11975.1;Name=CAL11975.1;Note=Highly similar to Escherichia coli lao/ao transport system kinase Argk or b2918 SWALL:ARGK_ECOLI (SWALL:P27254) (331 aa) fasta scores: E(): 1.5e-78%2C 67.37 id in 331 aa%2C Caulobacter crescentus hypothetical protein Cc2483 SWALL:YO83_CAUCR (SWALL:P37895) (326 aa) fasta scores: E(): 3.1e-48%2C 49.05 38d in 316 aa and Methylobacterium extorquens GTPase/ATPase MeaB SWALL:Q8RPA0 (EMBL:AF416776) (329 aa) fasta scores: E(): 9e-47%2C 45.17 38d in 321 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37895;product=putative GTPase/ATPase;protein_id=CAL11975.1;transl_table=11
AM286415.1	EMBL	gene	2079538	2081682	.	-	.	ID=gene1872;Name=YE1895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1895
AM286415.1	EMBL	CDS	2079538	2081682	.	-	0	ID=cds1807;Parent=gene1872;Dbxref=EnsemblGenomes-Gn:YE1895,EnsemblGenomes-Tr:CAL11978,GOA:A1JMH3,InterPro:IPR006098,InterPro:IPR006099,InterPro:IPR006158,InterPro:IPR006159,InterPro:IPR014348,InterPro:IPR016176,UniProtKB/TrEMBL:A1JMH3,NCBI_GP:CAL11978.1;Name=CAL11978.1;Note=Highly similar to many methylmalonyl-CoA mutases including: Rhizobium meliloti methylmalonyl-CoA mutase BhbA or rb1449 or smb20757 SWALL:MUTB_RHIME (SWALL:O86028) (712 aa) fasta scores: E(): 3.2e-160%2C 60.7 38d in 710 aa and to Escherichia coli Sbm protein or b2917 SWALL:SBM_ECOLI (SWALL:P27253) (714 aa) fasta scores: E(): 0%2C 86.27 38d in 714 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P27253;product=methylmalonyl-CoA mutase;protein_id=CAL11978.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2079571	2079930	.	-	.	ID=id3449;Note=Pfam match to entry PF02310 B12-binding%2C B12 binding domain%2C score 188.8%2C E-value 5.8e-54;gbkey=misc_feature;inference=protein motif:PFAM:PF02310
AM286415.1	EMBL	sequence_feature	2080057	2081604	.	-	.	ID=id3450;Note=Pfam match to entry PF01642 MM_CoA_mutase%2CMethylmalonyl-CoA mutase%2C score 1109.7%2C E-value 0;gbkey=misc_feature;inference=protein motif:PFAM:PF01642
AM286415.1	EMBL	sequence_feature	2080498	2080575	.	-	.	ID=id3451;Note=PS00544 Methylmalonyl-CoA mutase signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00544
AM286415.1	EMBL	gene	2081969	2082838	.	-	.	ID=gene1873;Name=YE1896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1896
AM286415.1	EMBL	CDS	2081969	2082838	.	-	0	ID=cds1808;Parent=gene1873;Dbxref=EnsemblGenomes-Gn:YE1896,EnsemblGenomes-Tr:CAL11979,GOA:A1JMH8,InterPro:IPR011009,InterPro:IPR016477,UniProtKB/TrEMBL:A1JMH8,NCBI_GP:CAL11979.1;Name=CAL11979.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11979.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2081981	2082838	.	-	.	ID=id3452;Note=Pfam match to entry PF03881 Fructosamin_kin%2CFructosamine kinase%2C score 599.9%2C E-value 1e-177;gbkey=misc_feature;inference=protein motif:PFAM:PF03881
AM286415.1	EMBL	gene	2083254	2084141	.	-	.	ID=gene1874;Name=YE1897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1897
AM286415.1	EMBL	CDS	2083254	2084141	.	-	0	ID=cds1809;Parent=gene1874;Dbxref=EnsemblGenomes-Gn:YE1897,EnsemblGenomes-Tr:CAL11981,GOA:A1JMH9,InterPro:IPR001626,InterPro:IPR029022,UniProtKB/TrEMBL:A1JMH9,NCBI_GP:CAL11981.1;Name=CAL11981.1;gbkey=CDS;product=chelated iron transport system membrane protein;protein_id=CAL11981.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2084013	2084081	.	-	.	ID=id3453;Note=8 probable transmembrane helices predicted for YE1897 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-116%2C 131-153%2C173-192%2C 196-218%2C 225-244 and 248-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	2083887	2083955	.	-	.	ID=id3453;Note=8 probable transmembrane helices predicted for YE1897 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-116%2C 131-153%2C173-192%2C 196-218%2C 225-244 and 248-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	2083794	2083853	.	-	.	ID=id3453;Note=8 probable transmembrane helices predicted for YE1897 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-116%2C 131-153%2C173-192%2C 196-218%2C 225-244 and 248-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	2083683	2083751	.	-	.	ID=id3453;Note=8 probable transmembrane helices predicted for YE1897 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-116%2C 131-153%2C173-192%2C 196-218%2C 225-244 and 248-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	2083566	2083625	.	-	.	ID=id3453;Note=8 probable transmembrane helices predicted for YE1897 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-116%2C 131-153%2C173-192%2C 196-218%2C 225-244 and 248-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	2083488	2083556	.	-	.	ID=id3453;Note=8 probable transmembrane helices predicted for YE1897 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-116%2C 131-153%2C173-192%2C 196-218%2C 225-244 and 248-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	2083410	2083469	.	-	.	ID=id3453;Note=8 probable transmembrane helices predicted for YE1897 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-116%2C 131-153%2C173-192%2C 196-218%2C 225-244 and 248-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	2083332	2083400	.	-	.	ID=id3453;Note=8 probable transmembrane helices predicted for YE1897 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-116%2C 131-153%2C173-192%2C 196-218%2C 225-244 and 248-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	2083335	2084105	.	-	.	ID=id3454;Note=Pfam match to entry PF00950 ABC-3%2C ABC 3 transport family%2C score 502.8%2C E-value 1.7e-148;gbkey=misc_feature;inference=protein motif:PFAM:PF00950
AM286415.1	EMBL	sequence_feature	2083434	2083466	.	-	.	ID=id3455;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2084034	2084066	.	-	.	ID=id3456;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2084138	2085022	.	-	.	ID=gene1875;Name=YE1898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1898
AM286415.1	EMBL	CDS	2084138	2085022	.	-	0	ID=cds1810;Parent=gene1875;Dbxref=EnsemblGenomes-Gn:YE1898,EnsemblGenomes-Tr:CAL11982,GOA:A1JMI1,InterPro:IPR001626,InterPro:IPR029022,UniProtKB/TrEMBL:A1JMI1,NCBI_GP:CAL11982.1;Name=CAL11982.1;gbkey=CDS;product=chelated iron transport system membrane protein;protein_id=CAL11982.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2084918	2084986	.	-	.	ID=id3457;Note=8 probable transmembrane helices predicted for YE1898 by TMHMM2.0 at aa 13-35%2C 50-72%2C 93-115%2C 135-157%2C170-192%2C 196-215%2C 222-241 and 251-273;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	2084807	2084875	.	-	.	ID=id3457;Note=8 probable transmembrane helices predicted for YE1898 by TMHMM2.0 at aa 13-35%2C 50-72%2C 93-115%2C 135-157%2C170-192%2C 196-215%2C 222-241 and 251-273;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	2084678	2084746	.	-	.	ID=id3457;Note=8 probable transmembrane helices predicted for YE1898 by TMHMM2.0 at aa 13-35%2C 50-72%2C 93-115%2C 135-157%2C170-192%2C 196-215%2C 222-241 and 251-273;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	2084552	2084620	.	-	.	ID=id3457;Note=8 probable transmembrane helices predicted for YE1898 by TMHMM2.0 at aa 13-35%2C 50-72%2C 93-115%2C 135-157%2C170-192%2C 196-215%2C 222-241 and 251-273;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	2084447	2084515	.	-	.	ID=id3457;Note=8 probable transmembrane helices predicted for YE1898 by TMHMM2.0 at aa 13-35%2C 50-72%2C 93-115%2C 135-157%2C170-192%2C 196-215%2C 222-241 and 251-273;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	2084378	2084437	.	-	.	ID=id3457;Note=8 probable transmembrane helices predicted for YE1898 by TMHMM2.0 at aa 13-35%2C 50-72%2C 93-115%2C 135-157%2C170-192%2C 196-215%2C 222-241 and 251-273;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	2084300	2084359	.	-	.	ID=id3457;Note=8 probable transmembrane helices predicted for YE1898 by TMHMM2.0 at aa 13-35%2C 50-72%2C 93-115%2C 135-157%2C170-192%2C 196-215%2C 222-241 and 251-273;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	2084204	2084272	.	-	.	ID=id3457;Note=8 probable transmembrane helices predicted for YE1898 by TMHMM2.0 at aa 13-35%2C 50-72%2C 93-115%2C 135-157%2C170-192%2C 196-215%2C 222-241 and 251-273;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	2084225	2084995	.	-	.	ID=id3458;Note=Pfam match to entry PF00950 ABC-3%2C ABC 3 transport family%2C score 446.3%2C E-value 1.7e-131;gbkey=misc_feature;inference=protein motif:PFAM:PF00950
AM286415.1	EMBL	gene	2085022	2085912	.	-	.	ID=gene1876;Name=YE1899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1899
AM286415.1	EMBL	CDS	2085022	2085912	.	-	0	ID=cds1811;Parent=gene1876;Dbxref=EnsemblGenomes-Gn:YE1899,EnsemblGenomes-Tr:CAL11983,GOA:A1JMI2,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMI2,NCBI_GP:CAL11983.1;Name=CAL11983.1;gbkey=CDS;product=ATP-binding transport protein;protein_id=CAL11983.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2085247	2085804	.	-	.	ID=id3459;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 174.6%2C E-value 1e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2085430	2085474	.	-	.	ID=id3460;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2085760	2085783	.	-	.	ID=id3461;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2085909	2086877	.	-	.	ID=gene1877;Name=YE1900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1900
AM286415.1	EMBL	CDS	2085909	2086877	.	-	0	ID=cds1812;Parent=gene1877;Dbxref=EnsemblGenomes-Gn:YE1900,EnsemblGenomes-Tr:CAL11984,GOA:A1JMI4,InterPro:IPR006127,InterPro:IPR006128,InterPro:IPR006129,UniProtKB/TrEMBL:A1JMI4,NCBI_GP:CAL11984.1;Name=CAL11984.1;gbkey=CDS;product=periplasmic-binding protein;protein_id=CAL11984.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2085915	2086799	.	-	.	ID=id3462;Note=Pfam match to entry PF01297 SBP_bac_9%2C Periplasmic solute binding protein family%2C score 498.6%2C E-value 3.2e-147;gbkey=misc_feature;inference=protein motif:PFAM:PF01297
AM286415.1	EMBL	gene	2087089	2087751	.	+	.	ID=gene1878;Name=YE1901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1901
AM286415.1	EMBL	CDS	2087089	2087751	.	+	0	ID=cds1813;Parent=gene1878;Dbxref=EnsemblGenomes-Gn:YE1901,EnsemblGenomes-Tr:CAL11985,GOA:A1JMI6,InterPro:IPR000189,InterPro:IPR008258,InterPro:IPR023346,UniProtKB/TrEMBL:A1JMI6,NCBI_GP:CAL11985.1;Name=CAL11985.1;gbkey=CDS;product=putative membrane-bound lytic murein transglycosylase;protein_id=CAL11985.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2087107	2087139	.	+	.	ID=id3463;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2087254	2087640	.	+	.	ID=id3464;Note=Pfam match to entry PF01464 SLT%2C Transglycosylase SLT domain%2C score 128.7%2C E-value 6.8e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF01464
AM286415.1	EMBL	sequence_feature	2087311	2087397	.	+	.	ID=id3465;Note=PS00922 Prokaryotic transglycosylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00922
AM286415.1	EMBL	gene	2087962	2088645	.	-	.	ID=gene1879;Name=marC;gbkey=Gene;gene=marC;gene_biotype=protein_coding;locus_tag=YE1902
AM286415.1	EMBL	CDS	2087962	2088645	.	-	0	ID=cds1814;Parent=gene1879;Dbxref=EnsemblGenomes-Gn:YE1902,EnsemblGenomes-Tr:CAL11986,GOA:A1JMI9,InterPro:IPR002771,UniProtKB/TrEMBL:A1JMI9,NCBI_GP:CAL11986.1;Name=CAL11986.1;gbkey=CDS;gene=marC;product=multiple antibiotic resistance protein;protein_id=CAL11986.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2088550	2088618	.	-	.	ID=id3466;Note=6 probable transmembrane helices predicted for YE1902 by TMHMM2.0 at aa 10-32%2C 52-74%2C 79-96%2C 119-141%2C156-178 and 198-220;gbkey=misc_feature;gene=marC;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2088424	2088492	.	-	.	ID=id3466;Note=6 probable transmembrane helices predicted for YE1902 by TMHMM2.0 at aa 10-32%2C 52-74%2C 79-96%2C 119-141%2C156-178 and 198-220;gbkey=misc_feature;gene=marC;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2088358	2088411	.	-	.	ID=id3466;Note=6 probable transmembrane helices predicted for YE1902 by TMHMM2.0 at aa 10-32%2C 52-74%2C 79-96%2C 119-141%2C156-178 and 198-220;gbkey=misc_feature;gene=marC;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2088223	2088291	.	-	.	ID=id3466;Note=6 probable transmembrane helices predicted for YE1902 by TMHMM2.0 at aa 10-32%2C 52-74%2C 79-96%2C 119-141%2C156-178 and 198-220;gbkey=misc_feature;gene=marC;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2088112	2088180	.	-	.	ID=id3466;Note=6 probable transmembrane helices predicted for YE1902 by TMHMM2.0 at aa 10-32%2C 52-74%2C 79-96%2C 119-141%2C156-178 and 198-220;gbkey=misc_feature;gene=marC;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2087986	2088054	.	-	.	ID=id3466;Note=6 probable transmembrane helices predicted for YE1902 by TMHMM2.0 at aa 10-32%2C 52-74%2C 79-96%2C 119-141%2C156-178 and 198-220;gbkey=misc_feature;gene=marC;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	2087989	2088624	.	-	.	ID=id3467;Note=Pfam match to entry PF01914 MarC%2C MarC family integral membrane protein%2C score 273.8%2C E-value 1.4e-79;gbkey=misc_feature;gene=marC;inference=protein motif:PFAM:PF01914
AM286415.1	EMBL	gene	2089053	2089337	.	+	.	ID=gene1880;Name=YE1904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1904
AM286415.1	EMBL	CDS	2089053	2089337	.	+	0	ID=cds1815;Parent=gene1880;Dbxref=EnsemblGenomes-Gn:YE1904,EnsemblGenomes-Tr:CAL11987,UniProtKB/TrEMBL:A1JMJ3,NCBI_GP:CAL11987.1;Name=CAL11987.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11987.1;transl_table=11
AM286415.1	EMBL	gene	2089426	2089764	.	+	.	ID=gene1881;Name=YE1905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1905
AM286415.1	EMBL	CDS	2089426	2089764	.	+	0	ID=cds1816;Parent=gene1881;Dbxref=EnsemblGenomes-Gn:YE1905,EnsemblGenomes-Tr:CAL11988,InterPro:IPR008317,InterPro:IPR009959,UniProtKB/TrEMBL:A1JMJ4,NCBI_GP:CAL11988.1;Name=CAL11988.1;Note=weakly similar to: Agrobacterium tumefaciens hypothetical protein Atu0742 or agr_c_1343 SWALL:Q8UHE0 (EMBL:AE009042) (123 aa) fasta scores: E(): 6.4e-08%2C36.44 38d in 107 aa%2C Caulobacter crescentus hypothetical protein Cc1951 SWALL:Q9A6X5 (EMBL:AE005868) (110 aa) fasta scores: E(): 0.029%2C 27.77 38d in 90 aa and Halobacterium sp. Vng0367H SWALL:Q9HS78 (EMBL:AE004995) (114 aa) fasta scores: E(): 0.049%2C 34.65 38d in 101 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE009042;product=hypothetical protein;protein_id=CAL11988.1;transl_table=11
AM286415.1	EMBL	gene	2089809	2090045	.	+	.	ID=gene1882;Name=YE1906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1906
AM286415.1	EMBL	CDS	2089809	2090045	.	+	0	ID=cds1817;Parent=gene1882;Dbxref=EnsemblGenomes-Gn:YE1906,EnsemblGenomes-Tr:CAL11989,UniProtKB/TrEMBL:A1JMJ5,NCBI_GP:CAL11989.1;Name=CAL11989.1;Note=weakly similar to Pasteurella multocida hypothetical protein Pm1196 SWALL:Q9CLM6 (EMBL:AE006160) (84 aa) fasta scores: E(): 8e-10%2C 44 38d in 75 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE006160;product=conserved hypothetical protein;protein_id=CAL11989.1;transl_table=11
AM286415.1	EMBL	gene	2090816	2091529	.	+	.	ID=gene1883;Name=YE1909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1909
AM286415.1	EMBL	CDS	2090816	2091529	.	+	0	ID=cds1818;Parent=gene1883;Dbxref=EnsemblGenomes-Gn:YE1909,EnsemblGenomes-Tr:CAL11990,InterPro:IPR007563,UniProtKB/TrEMBL:A1JMJ6,NCBI_GP:CAL11990.1;Name=CAL11990.1;Note=Similar to many proteins of undefined function including: Escherichia coli hypothetical protein YqgA or b2966 SWALL:YQGA_ECOLI (SWALL:Q46831) (235 aa) fasta scores: E(): 2.1e-37%2C 46.12 38d in 232 aa and Salmonella typhimurium%2C and Salmonella typhi putative inner membrane protein YqgA or Stm3115 or Sty3272 SWALL:Q8XGN5 (EMBL:AE008843) (235 aa) fasta scores: E(): 9.4e-36%2C43.83 38d in 235 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q46831;product=putative inner membrane protein;protein_id=CAL11990.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2090828	2090881	.	+	.	ID=id3468;Note=6 probable transmembrane helices predicted for YE1909 by TMHMM2.0 at aa 5-22%2C 42-64%2C 110-132%2C 145-167%2C187-205 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2090939	2091007	.	+	.	ID=id3468;Note=6 probable transmembrane helices predicted for YE1909 by TMHMM2.0 at aa 5-22%2C 42-64%2C 110-132%2C 145-167%2C187-205 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2091143	2091211	.	+	.	ID=id3468;Note=6 probable transmembrane helices predicted for YE1909 by TMHMM2.0 at aa 5-22%2C 42-64%2C 110-132%2C 145-167%2C187-205 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2091248	2091316	.	+	.	ID=id3468;Note=6 probable transmembrane helices predicted for YE1909 by TMHMM2.0 at aa 5-22%2C 42-64%2C 110-132%2C 145-167%2C187-205 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2091374	2091430	.	+	.	ID=id3468;Note=6 probable transmembrane helices predicted for YE1909 by TMHMM2.0 at aa 5-22%2C 42-64%2C 110-132%2C 145-167%2C187-205 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2091449	2091517	.	+	.	ID=id3468;Note=6 probable transmembrane helices predicted for YE1909 by TMHMM2.0 at aa 5-22%2C 42-64%2C 110-132%2C 145-167%2C187-205 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	2091649	2091861	.	-	.	ID=gene1884;Name=YE1910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1910
AM286415.1	EMBL	CDS	2091649	2091861	.	-	0	ID=cds1819;Parent=gene1884;Dbxref=EnsemblGenomes-Gn:YE1910,EnsemblGenomes-Tr:CAL11991,InterPro:IPR025309,UniProtKB/TrEMBL:A1JMJ8,NCBI_GP:CAL11991.1;Name=CAL11991.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL11991.1;transl_table=11
AM286415.1	EMBL	gene	2092185	2094113	.	+	.	ID=gene1885;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=YE1912
AM286415.1	EMBL	CDS	2092185	2094113	.	+	0	ID=cds1820;Parent=gene1885;Dbxref=EnsemblGenomes-Gn:YE1912,EnsemblGenomes-Tr:CAL11992,GOA:A1JMJ9,InterPro:IPR002314,InterPro:IPR002320,InterPro:IPR004095,InterPro:IPR004154,InterPro:IPR006195,InterPro:IPR012675,InterPro:IPR012676,InterPro:IPR012947,InterPro:IPR018163,NCBI_GP:CAL11992.1;Name=CAL11992.1;gbkey=CDS;gene=thrS;product=threonyl-tRNA synthetase;protein_id=CAL11992.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2092185	2092367	.	+	.	ID=id3469;Note=Pfam match to entry PF02824 TGS%2C TGS domain%2C score 52.2%2C E-value 7.5e-13;gbkey=misc_feature;gene=thrS;inference=protein motif:PFAM:PF02824
AM286415.1	EMBL	sequence_feature	2092968	2093429	.	+	.	ID=id3470;Note=Pfam match to entry PF00587 tRNA-synt_2b%2C tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)%2C score 201.9%2C E-value 6.5e-58;gbkey=misc_feature;gene=thrS;inference=protein motif:PFAM:PF00587
AM286415.1	EMBL	sequence_feature	2093268	2093333	.	+	.	ID=id3471;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;gbkey=misc_feature;gene=thrS;inference=protein motif:Prosite:PS00179
AM286415.1	EMBL	sequence_feature	2093727	2093756	.	+	.	ID=id3472;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=thrS;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	2093787	2094077	.	+	.	ID=id3473;Note=Pfam match to entry PF03129 HGTP_anticodon%2CAnticodon binding domain%2C score 121.8%2C E-value 8.5e-34;gbkey=misc_feature;gene=thrS;inference=protein motif:PFAM:PF03129
AM286415.1	EMBL	gene	2094117	2094668	.	+	.	ID=gene1886;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=YE1913
AM286415.1	EMBL	CDS	2094117	2094668	.	+	0	ID=cds1821;Parent=gene1886;Dbxref=EnsemblGenomes-Gn:YE1913,EnsemblGenomes-Tr:CAL11993,GOA:A1JMK2,InterPro:IPR001288,InterPro:IPR019813,InterPro:IPR019814,InterPro:IPR019815,NCBI_GP:CAL11993.1;Name=CAL11993.1;Note=Similar to Yersinia pestis translation initiation factor IF-3 InfC or Ypo2432 or Y1904 SWALL:IF3_YERPE (SWALL:Q8ZDW6) (183 aa) fasta scores: E(): 1.4e-62%2C 98.89 id in 181 aa and Serratia marcescens translation initiation factor IF-3 InfC SWALL:IF3_SERMA (SWALL:P33320) (183 aa) fasta scores: E(): 4.4e-59%2C 93.37 38d in 181 aa. The start codon is an AUU%2C as with the E. coli IF-3 InfC.;gbkey=CDS;gene=infC;inference=similar to sequence:UniProtKB:Q8ZDW6;product=translation initiation factor;protein_id=CAL11993.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2094318	2094659	.	+	.	ID=id3474;Note=Pfam match to entry PF00707 IF3%2C Translation initiation factor IF-3%2C score 170.4%2C E-value 1.9e-48;gbkey=misc_feature;gene=infC;inference=protein motif:PFAM:PF00707
AM286415.1	EMBL	gene	2094765	2094962	.	+	.	ID=gene1887;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=YE1914
AM286415.1	EMBL	CDS	2094765	2094962	.	+	0	ID=cds1822;Parent=gene1887;Dbxref=EnsemblGenomes-Gn:YE1914,EnsemblGenomes-Tr:CAL11994,GOA:A1JMK4,InterPro:IPR001706,InterPro:IPR018265,InterPro:IPR021137,NCBI_GP:CAL11994.1;Name=CAL11994.1;gbkey=CDS;gene=rpmI;product=50S ribosomal protein L35;protein_id=CAL11994.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2094774	2094950	.	+	.	ID=id3475;Note=Pfam match to entry PF01632 Ribosomal_L35p%2CRibosomal protein L35%2C score 117.5%2C E-value 1.6e-32;gbkey=misc_feature;gene=rpmI;inference=protein motif:PFAM:PF01632
AM286415.1	EMBL	sequence_feature	2094774	2094809	.	+	.	ID=id3476;Note=PS00936 Ribosomal protein L35 signature.;gbkey=misc_feature;gene=rpmI;inference=protein motif:Prosite:PS00936
AM286415.1	EMBL	gene	2095000	2095356	.	+	.	ID=gene1888;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;gene_synonym=pdzA;locus_tag=YE1915
AM286415.1	EMBL	CDS	2095000	2095356	.	+	0	ID=cds1823;Parent=gene1888;Dbxref=EnsemblGenomes-Gn:YE1915,EnsemblGenomes-Tr:CAL11995,GOA:A1JMK7,InterPro:IPR005813,NCBI_GP:CAL11995.1;Name=CAL11995.1;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=CAL11995.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2095003	2095326	.	+	.	ID=id3477;Note=Pfam match to entry PF00453 Ribosomal_L20%2CRibosomal protein L20%2C score 238.5%2C E-value 6.3e-69;gbkey=misc_feature;gene=rplT;inference=protein motif:PFAM:PF00453
AM286415.1	EMBL	sequence_feature	2095159	2095209	.	+	.	ID=id3478;Note=PS00937 Ribosomal protein L20 signature.;gbkey=misc_feature;gene=rplT;inference=protein motif:Prosite:PS00937
AM286415.1	EMBL	gene	2095821	2096804	.	+	.	ID=gene1889;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=YE1916
AM286415.1	EMBL	CDS	2095821	2096804	.	+	0	ID=cds1824;Parent=gene1889;Dbxref=EnsemblGenomes-Gn:YE1916,EnsemblGenomes-Tr:CAL11996,GOA:A1JML2,InterPro:IPR002319,InterPro:IPR004188,InterPro:IPR004529,InterPro:IPR006195,InterPro:IPR010978,InterPro:IPR022911,NCBI_GP:CAL11996.1;Name=CAL11996.1;gbkey=CDS;gene=pheS;product=phenylalanyl-tRNA synthetase alpha chain;protein_id=CAL11996.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2095857	2096084	.	+	.	ID=id3479;Note=Pfam match to entry PF02912 Phe_tRNA-synt_N%2CAminoacyl tRNA synthetase class II%2C N-terminal domain %2Cscore 118.9%2C E-value 6.3e-33;gbkey=misc_feature;gene=pheS;inference=protein motif:PFAM:PF02912
AM286415.1	EMBL	sequence_feature	2096142	2096759	.	+	.	ID=id3480;Note=Pfam match to entry PF01409 tRNA-synt_2d%2C tRNA synthetases class II core domain (F)%2C score 475.4%2CE-value 3e-140;gbkey=misc_feature;gene=pheS;inference=protein motif:PFAM:PF01409
AM286415.1	EMBL	sequence_feature	2096400	2096450	.	+	.	ID=id3481;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;gbkey=misc_feature;gene=pheS;inference=protein motif:Prosite:PS00179
AM286415.1	EMBL	sequence_feature	2096706	2096735	.	+	.	ID=id3482;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=pheS;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	2096819	2099206	.	+	.	ID=gene1890;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=YE1917
AM286415.1	EMBL	CDS	2096819	2099206	.	+	0	ID=cds1825;Parent=gene1890;Dbxref=EnsemblGenomes-Gn:YE1917,EnsemblGenomes-Tr:CAL11997,GOA:A1JMM1,InterPro:IPR002547,InterPro:IPR004532,InterPro:IPR005121,InterPro:IPR005146,InterPro:IPR005147,InterPro:IPR009061,InterPro:IPR012340,InterPro:IPR020825,UniProtKB/TrEMBL:A1JMM1,NCBI_GP:CAL11997.1;Name=CAL11997.1;gbkey=CDS;gene=pheT;product=phenylalanyl-tRNA synthetase beta chain;protein_id=CAL11997.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2096951	2097256	.	+	.	ID=id3483;Note=Pfam match to entry PF01588 tRNA_bind%2C Putative tRNA binding domain%2C score 141.8%2C E-value 7.8e-40;gbkey=misc_feature;gene=pheT;inference=protein motif:PFAM:PF01588
AM286415.1	EMBL	sequence_feature	2097263	2097703	.	+	.	ID=id3484;Note=Pfam match to entry PF03483 B3_4%2C B3/4 domain %2Cscore 273.6%2C E-value 1.7e-79;gbkey=misc_feature;gene=pheT;inference=protein motif:PFAM:PF03483
AM286415.1	EMBL	sequence_feature	2098025	2098231	.	+	.	ID=id3485;Note=Pfam match to entry PF03484 B5%2C tRNA synthetase B5 domain%2C score 105.2%2C E-value 8.2e-29;gbkey=misc_feature;gene=pheT;inference=protein motif:PFAM:PF03484
AM286415.1	EMBL	sequence_feature	2098919	2099200	.	+	.	ID=id3486;Note=Pfam match to entry PF03147 FDX-ACB%2CFerredoxin-fold anticodon binding domain%2C score 165.8%2CE-value 4.9e-47;gbkey=misc_feature;gene=pheT;inference=protein motif:PFAM:PF03147
AM286415.1	EMBL	gene	2099211	2099507	.	+	.	ID=gene1891;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;gene_synonym=hid,himA;locus_tag=YE1918
AM286415.1	EMBL	CDS	2099211	2099507	.	+	0	ID=cds1826;Parent=gene1891;Dbxref=EnsemblGenomes-Gn:YE1918,EnsemblGenomes-Tr:CAL11998,GOA:A1JMM4,InterPro:IPR000119,InterPro:IPR005684,InterPro:IPR010992,InterPro:IPR020816,NCBI_GP:CAL11998.1;Name=CAL11998.1;gbkey=CDS;gene=ihfA;product=integration host factor alpha-subunit;protein_id=CAL11998.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2099217	2099486	.	+	.	ID=id3487;Note=Pfam match to entry PF00216 Bac_DNA_binding%2CBacterial DNA-binding protein%2C score 163.4%2C E-value 2.5e-46;gbkey=misc_feature;gene=ihfA;inference=protein motif:PFAM:PF00216
AM286415.1	EMBL	sequence_feature	2099352	2099411	.	+	.	ID=id3488;Note=PS00045 Bacterial histone-like DNA-binding proteins signature.;gbkey=misc_feature;gene=ihfA;inference=protein motif:Prosite:PS00045
AM286415.1	EMBL	repeat_region	2099649	2100574	.	+	.	ID=id3489;Note=Partial insertion sequence element IS1400;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	2099649	2099660	.	+	.	ID=id3490;Note=putative inverted repeats for IS1400;gbkey=repeat_region
AM286415.1	EMBL	gene	2099704	2099994	.	+	.	ID=gene1892;Name=trp1400A;gbkey=Gene;gene=trp1400A;gene_biotype=protein_coding;locus_tag=YE1919
AM286415.1	EMBL	CDS	2099704	2099994	.	+	0	ID=cds1827;Parent=gene1892;Dbxref=EnsemblGenomes-Gn:YE1919,EnsemblGenomes-Tr:CAL11999,GOA:A1JMM8,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JMM8,NCBI_GP:CAL11999.1;Name=CAL11999.1;Note=Previously sequenced as Yersinia enterocolitica IS1400 transposase A Trp1400A SWALL:Q9X9H8 (EMBL:AJ132945) (96 aa) fasta scores: E(): 4.7e-32%2C 97.91 38d in 96 aa%2Cand to Yersinia pestis putative transposase Y0084 or Ypcd1.93 SWALL:O68709 (EMBL:AF053946) (88 aa) fasta scores: E(): 7.8e-15%2C 52.27 38d in 88 aa;gbkey=CDS;gene=trp1400A;inference=similar to sequence:INSDC:AJ132945;product=IS1400 transposase A;protein_id=CAL11999.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2099737	2099991	.	+	.	ID=id3491;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 117.0%2C E-value 2.4e-32;gbkey=misc_feature;gene=trp1400A;inference=protein motif:PFAM:PF01527
AM286415.1	EMBL	sequence_feature	2099791	2099856	.	+	.	ID=id3492;Note=Predicted helix-turn-helix motif with score 1103.000%2C SD 2.94 at aa 30-51%2C sequence RTVKDVCREAAISEASYYNWKA;gbkey=misc_feature;gene=trp1400A
AM286415.1	EMBL	pseudogene	2100045	2100529	.	+	.	ID=gene1893;Name=trp1400B;gbkey=Gene;gene=trp1400B;gene_biotype=pseudogene;locus_tag=YE1920;pseudo=true
AM286415.1	EMBL	CDS	2100045	2100464	.	+	0	ID=cds1828;Parent=gene1893;Note=Previously sequenced as Yersinia enterocolitica IS1400 transposase B Trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 2.5e-56%2C 97.18 38d in 142 aa. Also similar to many others e.g. Yersinia pestis putative transposase Ypcd1.64 SWALL:Q9RI18 (EMBL:AL117189) (144 aa) fasta scores: E(): 5.9e-27%2C 58.19 38d in 122 aa. Note the differing predicted start codons for this CDS compared with that previously published. This IS1400 element is a partial sequence. Consequently the predicted product of this CDS lacks the C-terminal ~~46 residues.;gbkey=CDS;gene=trp1400B;inference=similar to sequence:INSDC:AL117189;product=IS1400 transposase B (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2100464	2100529	.	+	0	ID=cds1828;Parent=gene1893;Note=Previously sequenced as Yersinia enterocolitica IS1400 transposase B Trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 2.5e-56%2C 97.18 38d in 142 aa. Also similar to many others e.g. Yersinia pestis putative transposase Ypcd1.64 SWALL:Q9RI18 (EMBL:AL117189) (144 aa) fasta scores: E(): 5.9e-27%2C 58.19 38d in 122 aa. Note the differing predicted start codons for this CDS compared with that previously published. This IS1400 element is a partial sequence. Consequently the predicted product of this CDS lacks the C-terminal ~~46 residues.;gbkey=CDS;gene=trp1400B;inference=similar to sequence:INSDC:AL117189;product=IS1400 transposase B (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	repeat_region	2100563	2100574	.	-	.	ID=id3493;Note=putative inverted repeats for IS1400;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	2100619	2101809	.	-	.	ID=id3494;Note=IS element;gbkey=repeat_region
AM286415.1	EMBL	gene	2100789	2101721	.	-	.	ID=gene1894;Name=YE1921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1921
AM286415.1	EMBL	CDS	2100789	2101721	.	-	0	ID=cds1829;Parent=gene1894;Dbxref=EnsemblGenomes-Gn:YE1921,EnsemblGenomes-Tr:CAL12001,InterPro:IPR006842,InterPro:IPR010106,UniProtKB/TrEMBL:A1JMN2,NCBI_GP:CAL12001.1;Name=CAL12001.1;Note=Similar to many proteins of undefined function%2Cthat are thought to represent a novel family of transposases%2Cincluding: Yersinia pestis hypothetical protein Ypo0076 SWALL:Q8ZJL8 (EMBL:AJ414141) (319 aa) fasta scores: E(): 1.8e-100%2C 84.83 38d in 310 aa and to Salmonella typhimurium hypothetical protein Pslt051 SWALL:YTL2_SALTY (SWALL:P37415) (313 aa) fasta scores: E(): 7.2e-73%2C 61.03 38d in 308 aa. Additional copies of this element are represented by YE1924%2C YE1655 and YE3497. There are also two partial sequences represented by YE1656 and YE1925.;gbkey=CDS;inference=similar to sequence:UniProtKB:P37415;product=putative transposase;protein_id=CAL12001.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2100858	2101717	.	-	.	ID=id3495;Note=Pfam match to entry PF04754 putative transposase%2CYhgA-like%2C E-value 1.3e-181;gbkey=misc_feature;inference=protein motif:PFAM:PF04754
AM286415.1	EMBL	gene	2101983	2102270	.	+	.	ID=gene1895;Name=YE1922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1922
AM286415.1	EMBL	CDS	2101983	2102270	.	+	0	ID=cds1830;Parent=gene1895;Dbxref=EnsemblGenomes-Gn:YE1922,EnsemblGenomes-Tr:CAL12002,InterPro:IPR007711,UniProtKB/TrEMBL:A1JMN5,NCBI_GP:CAL12002.1;Name=CAL12002.1;Note=Similar to Escherichia coli plasmid Rts1 killer protein HigB%2C part of the HigBA toxin/antidote plasmid maintenance system%2C SWALL:Q52305 (EMBL:U43847) (92 aa) fasta scores: E(): 3.3e-17%2C 56.84 38d in 95 aa%2C and to Xylella fastidiosa proteic killer protein Xf0721 SWALL:Q9PFE9 (EMBL:AE003914) (105 aa) fasta scores: E(): 1.7e-09%2C 39.58 38d in 96 aa;gbkey=CDS;inference=similar to sequence:INSDC:U43847;product=putative proteic toxin protein;protein_id=CAL12002.1;transl_table=11
AM286415.1	EMBL	gene	2102270	2102584	.	+	.	ID=gene1896;Name=YE1923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1923
AM286415.1	EMBL	CDS	2102270	2102584	.	+	0	ID=cds1831;Parent=gene1896;Dbxref=EnsemblGenomes-Gn:YE1923,EnsemblGenomes-Tr:CAL12003,GOA:A1JMN6,InterPro:IPR001387,InterPro:IPR010982,InterPro:IPR013430,UniProtKB/TrEMBL:A1JMN6,NCBI_GP:CAL12003.1;Name=CAL12003.1;Note=Similar to Escherichia coli plasmid Rts1 antidote protein HigA SWALL:Q52306 (EMBL:U43847) (104 aa) fasta scores: E(): 2.2e-08%2C 38.63 38d in 88 aa%2C Escherichia coli hypothetical protein YddM or b1477 SWALL:YDDM_ECOLI (SWALL:P76125) (94 aa) fasta scores: E(): 3e-10%2C 42.85 38d in 91 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76125;product=antidote protein;protein_id=CAL12003.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2102306	2102473	.	+	.	ID=id3496;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 30.8%2C E-value 2.1e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	2102333	2102398	.	+	.	ID=id3497;Note=Predicted helix-turn-helix motif with score 1901.000%2C SD 5.66 at aa 22-43%2C sequence LSINAAARALGVAPSTLSRVMR;gbkey=misc_feature
AM286415.1	EMBL	repeat_region	2102580	2103735	.	-	.	ID=id3498;Note=IS element;gbkey=repeat_region
AM286415.1	EMBL	gene	2102751	2103647	.	-	.	ID=gene1897;Name=YE1924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1924
AM286415.1	EMBL	CDS	2102751	2103647	.	-	0	ID=cds1832;Parent=gene1897;Dbxref=EnsemblGenomes-Gn:YE1924,EnsemblGenomes-Tr:CAL12004,InterPro:IPR006842,InterPro:IPR010106,UniProtKB/TrEMBL:A1JMN9,NCBI_GP:CAL12004.1;Name=CAL12004.1;Note=Similar to many proteins%2C of undefined function%2Cthat are thought to represent a novel family of transposases%2C including: Escherichia coli hypothetical protein Yhga or b3411 SWALL:YHGA_ECOLI (SWALL:P31667) (292 aa) fasta scores: E(): 3.9e-62%2C 55.97 38d in 293 aa%2CYersinia pestis putative transposase Y1072 or Ypmt1.71 SWALL:O68786 (EMBL:AF074611) (328 aa) fasta scores: E(): 5.7e-63%2C 57.18 38d in 320 aa and Escherichia coli hypothetical protein YadD or b0132 SWALL:YADD_ECOLI (SWALL:P31665) (300 aa) fasta scores: E(): 4.2e-55%2C 51.87 id in 293 aa. Additional copies of this element are represented by YE1921%2C YE1655 and YE3497. There are also two partial sequences represented by YE1656 and YE1925.;gbkey=CDS;inference=similar to sequence:UniProtKB:P31667;product=putative transposase;protein_id=CAL12004.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2102820	2103643	.	-	.	ID=id3499;Note=Pfam match to entry PF04754 putative transposase%2CYhgA-like%2C E-value 2.1e-177;gbkey=misc_feature;inference=protein motif:PFAM:PF04754
AM286415.1	EMBL	pseudogene	2103853	2103990	.	-	.	ID=gene1898;Name=YE1925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1925;pseudo=true
AM286415.1	EMBL	CDS	2103853	2103990	.	-	0	ID=cds1833;Parent=gene1898;Note=This CDS appears to be a gene remnant. Similar to the very C-termini of many proteins%2C of undefined function%2C that are thought to represent a novel family of transposases%2C including: Yersinia pestis hypothetical protein Ypo0076 SWALL:Q8ZJL8 (EMBL:AJ414141) (319 aa) fasta scores: E(): 1.7e-05%2C 55.55 38d in 45 aa%2C Yersinia pestis putative transposase Y1072 or Ypmt1.71 SWALL:O68786 (EMBL:AF074611) (328 aa) fasta scores: E(): 2%2C 38.77 38d in 49 aa and to Escherichia coli hypothetical protein YfaD or b2244 SWALL:YFAD_ECOLI (SWALL:P37014) (299 aa) fasta scores: E(): 3.9%2C 34.88 38d in 43 aa.Additional copies of this element are represented by YE1921%2C YE1655 and YE3497. Another partial sequence is represented by YE1656.;gbkey=CDS;inference=similar to sequence:UniProtKB:P37014;product=putative transposase (remnant);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	2104468	2104788	.	-	.	ID=gene1899;Name=YE1926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1926
AM286415.1	EMBL	CDS	2104468	2104788	.	-	0	ID=cds1834;Parent=gene1899;Dbxref=EnsemblGenomes-Gn:YE1926,EnsemblGenomes-Tr:CAL12006,UniProtKB/TrEMBL:A1JMP1,NCBI_GP:CAL12006.1;Name=CAL12006.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12006.1;transl_table=11
AM286415.1	EMBL	gene	2105114	2105293	.	+	.	ID=gene1900;Name=YE1927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1927
AM286415.1	EMBL	CDS	2105114	2105293	.	+	0	ID=cds1835;Parent=gene1900;Dbxref=EnsemblGenomes-Gn:YE1927,EnsemblGenomes-Tr:CAL12007,UniProtKB/TrEMBL:A1JMP3,NCBI_GP:CAL12007.1;Name=CAL12007.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12007.1;transl_table=11
AM286415.1	EMBL	gene	2105365	2105625	.	+	.	ID=gene1901;Name=YE1928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1928
AM286415.1	EMBL	CDS	2105365	2105625	.	+	0	ID=cds1836;Parent=gene1901;Dbxref=EnsemblGenomes-Gn:YE1928,EnsemblGenomes-Tr:CAL12008,GOA:A1JMP6,InterPro:IPR007337,InterPro:IPR026262,UniProtKB/TrEMBL:A1JMP6,NCBI_GP:CAL12008.1;Name=CAL12008.1;Note=Similar to Escherichia coli DNA-damage-inducible protein J DinJ or b0226 SWALL:DINJ_ECOLI (SWALL:Q47150) (86 aa) fasta scores: E(): 1.4e-24%2C 82.55 38d in 86 aa and to Yersinia pestis plasmid pYV Orf11 SWALL:Q9RPP0 (EMBL:AF152923) (86 aa) fasta scores: E(): 1.5e-25%2C 84.88 id in 86 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q47150;product=DinJ-like protein;protein_id=CAL12008.1;transl_table=11
AM286415.1	EMBL	gene	2105632	2105910	.	+	.	ID=gene1902;Name=YE1929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1929
AM286415.1	EMBL	CDS	2105632	2105910	.	+	0	ID=cds1837;Parent=gene1902;Dbxref=EnsemblGenomes-Gn:YE1929,EnsemblGenomes-Tr:CAL12009,InterPro:IPR004386,InterPro:IPR007712,UniProtKB/TrEMBL:A1JMP7,NCBI_GP:CAL12009.1;Name=CAL12009.1;Note=Similar to Yersinia pestis plasmid pYV Orf10 SWALL:Q9RPN9 (EMBL:AF152923) (92 aa) fasta scores: E(): 2.8e-31%2C 85.87 38d in 92 aa and to Escherichia coli hypothetical protein%2C endcoded adjacent to dinJ%2C YafQ or b0225 SWALL:YAFQ_ECOLI (SWALL:Q47149) (92 aa) fasta scores: E(): 1.8e-27%2C 77.52 38d in 89 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q47149;product=conserved hypothetical protein;protein_id=CAL12009.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2105641	2105907	.	+	.	ID=id3500;Note=Pfam match to entry PF03890 DUF332%2C Domain of unknown function (DUF332)%2C score 183.0%2C E-value 3.1e-52;gbkey=misc_feature;inference=protein motif:PFAM:PF03890
AM286415.1	EMBL	gene	2105953	2106567	.	-	.	ID=gene1903;Name=YE1930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1930
AM286415.1	EMBL	CDS	2105953	2106567	.	-	0	ID=cds1838;Parent=gene1903;Dbxref=EnsemblGenomes-Gn:YE1930,EnsemblGenomes-Tr:CAL12010,InterPro:IPR003458,UniProtKB/TrEMBL:A1JMQ0,NCBI_GP:CAL12010.1;Name=CAL12010.1;Note=Similar to the tail fibre assembly proteins from many lambdoid phage: Escherichia coli tail fiber assembly protein homolog from lambdoid prophage Rac TfaR or b1373 SWALL:TFAR_ECOLI (SWALL:P77163) (191 aa) fasta scores: E(): 4.2e-19%2C 38.29 38d in 188 aa%2C Escherichia coli tail fiber assembly protein homolog from lambdoid prophage E14 tfae or b1156 SWALL:TFAE_ECOLI (SWALL:P09153) (200 aa) fasta scores: E(): 2.5e-20%2C 36.5 38d in 200 aa and to Yersinia pestis lambda tail fiber assembly protein G Y1053 or Ypmt1.03C SWALL:O68721 (EMBL:AF074611) (202 aa) fasta scores: E(): 5.4e-20%2C 38.74 38d in 191 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77163;product=phage tail fiber assembly protein;protein_id=CAL12010.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2105956	2106378	.	-	.	ID=id3501;Note=Pfam match to entry PF02413 DUF144%2C Domain of unknown function DUF144%2C score 101.0%2C E-value 1.5e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF02413
AM286415.1	EMBL	gene	2106745	2107629	.	-	.	ID=gene1904;Name=YE1931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1931
AM286415.1	EMBL	CDS	2106745	2107629	.	-	0	ID=cds1839;Parent=gene1904;Dbxref=EnsemblGenomes-Gn:YE1931,EnsemblGenomes-Tr:CAL12011,InterPro:IPR006949,InterPro:IPR022225,UniProtKB/TrEMBL:A1JMQ3,NCBI_GP:CAL12011.1;Name=CAL12011.1;Note=Similar to the variable tail fiber proteins of many P2 bacteriophage: Bacteriophage P2 probable tail fiber protein H SWALL:VPH_BPP2 (SWALL:P26700) (669 aa) fasta scores: E(): 2e-16%2C 35.88 38d in 248 aa%2C Salmonella typhi probable variable tail fibre protein Sty3691 SWALL:Q8Z343 (EMBL:AL627279) (504 aa) fasta scores: E(): 2.1e-28%2C57.55 38d in 139 aa and Salmonella typhimurium Fels-2 prophage: similar to tail fiber protein in phage P2 stm2706 SWALL:Q8ZMU5 (EMBL:AE008823) (524 aa) fasta scores: E(): 5.3e-28%2C 57.55 38d in 139 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P26700;product=probable phage tail fiber protein;protein_id=CAL12011.1;transl_table=11
AM286415.1	EMBL	gene	2108495	2112484	.	-	.	ID=gene1905;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;gene_synonym=poaA;locus_tag=YE1933
AM286415.1	EMBL	CDS	2108495	2112484	.	-	0	ID=cds1840;Parent=gene1905;Dbxref=EnsemblGenomes-Gn:YE1933,EnsemblGenomes-Tr:CAL12012,GOA:A1JMQ4,InterPro:IPR002872,InterPro:IPR005933,InterPro:IPR010985,InterPro:IPR015590,InterPro:IPR016160,InterPro:IPR016161,InterPro:IPR016162,InterPro:IPR016163,InterPro:IPR024082,InterPro:IPR024089,InterPro:IPR024090,InterPro:IPR025703,InterPro:IPR029041,InterPro:IPR029510,UniProtKB/TrEMBL:A1JMQ4,NCBI_GP:CAL12012.1;Name=CAL12012.1;gbkey=CDS;gene=putA;product=bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate;protein_id=CAL12012.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2109122	2110504	.	-	.	ID=id3502;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 324.6%2C E-value 7.3e-95;gbkey=misc_feature;gene=putA;inference=protein motif:PFAM:PF00171
AM286415.1	EMBL	sequence_feature	2109701	2109736	.	-	.	ID=id3503;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;gbkey=misc_feature;gene=putA;inference=protein motif:Prosite:PS00070
AM286415.1	EMBL	sequence_feature	2109797	2109820	.	-	.	ID=id3504;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=misc_feature;gene=putA;inference=protein motif:Prosite:PS00687
AM286415.1	EMBL	sequence_feature	2110760	2111800	.	-	.	ID=id3505;Note=Pfam match to entry PF01619 Pro_dh%2C Proline dehydrogenase%2C score 625.9%2C E-value 1.5e-185;gbkey=misc_feature;gene=putA;inference=protein motif:PFAM:PF01619
AM286415.1	EMBL	gene	2113011	2114495	.	+	.	ID=gene1906;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=YE1934
AM286415.1	EMBL	CDS	2113011	2114495	.	+	0	ID=cds1841;Parent=gene1906;Dbxref=EnsemblGenomes-Gn:YE1934,EnsemblGenomes-Tr:CAL12013,GOA:A1JMQ9,InterPro:IPR001734,InterPro:IPR011851,InterPro:IPR018212,InterPro:IPR019900,UniProtKB/TrEMBL:A1JMQ9,NCBI_GP:CAL12013.1;Name=CAL12013.1;gbkey=CDS;gene=putP;product=proline permease;protein_id=CAL12013.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2113029	2113097	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2113206	2113274	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2113380	2113448	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2113491	2113559	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2113593	2113661	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2113704	2113772	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2113830	2113898	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2113995	2114063	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2114124	2114183	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2114211	2114279	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2114292	2114360	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2114373	2114441	.	+	.	ID=id3506;Note=12 probable transmembrane helices predicted for YE1934 by TMHMM2.0 at aa 7-29%2C 66-88%2C 124-146%2C 161-183%2C195-217%2C 232-254%2C 274-296%2C 329-351%2C 372-391%2C 401-423%2C428-450 and 455-477;gbkey=misc_feature;gene=putP;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2113113	2114321	.	+	.	ID=id3507;Note=Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family%2C score 664.1%2C E-value 4.7e-197;gbkey=misc_feature;gene=putP;inference=protein motif:PFAM:PF00474
AM286415.1	EMBL	sequence_feature	2114010	2114042	.	+	.	ID=id3508;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=putP;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2114265	2114327	.	+	.	ID=id3509;Note=PS00457 Sodium:solute symporter family signature 2.;gbkey=misc_feature;gene=putP;inference=protein motif:Prosite:PS00457
AM286415.1	EMBL	repeat_region	2114562	2115865	.	-	.	ID=id3510;Note=IS1330;gbkey=repeat_region
AM286415.1	EMBL	gene	2114588	2115781	.	-	.	ID=gene1907;Name=tpn1330;gbkey=Gene;gene=tpn1330;gene_biotype=protein_coding;locus_tag=YE1935
AM286415.1	EMBL	CDS	2114588	2115781	.	-	0	ID=cds1842;Parent=gene1907;Dbxref=EnsemblGenomes-Gn:YE1935,EnsemblGenomes-Tr:CAL12014,GOA:A1JMR7,InterPro:IPR002559,InterPro:IPR012337,UniProtKB/TrEMBL:A1JMR7,NCBI_GP:CAL12014.1;Name=CAL12014.1;Note=Previously sequenced as Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:Q8RSF5 (EMBL:AJ344215) (397 aa) fasta scores: E(): 1.4e-162%2C99.49 38d in 397 aa. Also similar to Shigella flexneri%2Cand Shigella flexneri 2a is10 orf s0034 or cp0027 SWALL:Q9AFX7 (EMBL:AF348706) (407 aa) fasta scores: E(): 6.7e-113%2C 68.26 38d in 397 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330;protein_id=CAL12014.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2114792	2115511	.	-	.	ID=id3511;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 54.3%2C E-value 1.7e-13;gbkey=misc_feature;gene=tpn1330;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	gene	2115973	2116302	.	-	.	ID=gene1908;Name=YE1936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1936
AM286415.1	EMBL	CDS	2115973	2116302	.	-	0	ID=cds1843;Parent=gene1908;Dbxref=EnsemblGenomes-Gn:YE1936,EnsemblGenomes-Tr:CAL12015,UniProtKB/TrEMBL:A1JMS0,NCBI_GP:CAL12015.1;Name=CAL12015.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12015.1;transl_table=11
AM286415.1	EMBL	gene	2116306	2117373	.	-	.	ID=gene1909;Name=YE1937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1937
AM286415.1	EMBL	CDS	2116306	2117373	.	-	0	ID=cds1844;Parent=gene1909;Dbxref=EnsemblGenomes-Gn:YE1937,EnsemblGenomes-Tr:CAL12016,UniProtKB/TrEMBL:A1JMS1,NCBI_GP:CAL12016.1;Name=CAL12016.1;Note=Similar to Yersinia pestis hypothetical protein Ypo1258 SWALL:Q8ZGM9 (EMBL:AJ414147) (382 aa) fasta scores: E(): 7.2e-48%2C 57.58 38d in 257 aa and to Yersinia pestis hypothetical protein Ypo0639 SWALL:Q8ZI76 (EMBL:AJ414143) (460 aa) fasta scores: E(): 4.8e-33%2C39.13 38d in 345 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414147;product=conserved hypothetical protein;protein_id=CAL12016.1;transl_table=11
AM286415.1	EMBL	gene	2118101	2118961	.	+	.	ID=gene1910;Name=YE1938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1938
AM286415.1	EMBL	CDS	2118101	2118961	.	+	0	ID=cds1845;Parent=gene1910;Dbxref=EnsemblGenomes-Gn:YE1938,EnsemblGenomes-Tr:CAL12017,GOA:A1JMS4,InterPro:IPR004923,UniProtKB/TrEMBL:A1JMS4,NCBI_GP:CAL12017.1;Name=CAL12017.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12017.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2118101	2118937	.	+	.	ID=id3512;Note=Pfam match to entry PF03239 FTR1%2C Iron permease FTR1 family%2C score 312.8%2C E-value 2.6e-91;gbkey=misc_feature;inference=protein motif:PFAM:PF03239
AM286415.1	EMBL	sequence_feature	2118200	2118268	.	+	.	ID=id3513;Note=6 probable transmembrane helices predicted for YE1938 by TMHMM2.0 at aa 34-56%2C 71-89%2C 123-145%2C 155-177%2C184-206 and 246-268;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2118311	2118367	.	+	.	ID=id3513;Note=6 probable transmembrane helices predicted for YE1938 by TMHMM2.0 at aa 34-56%2C 71-89%2C 123-145%2C 155-177%2C184-206 and 246-268;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2118467	2118535	.	+	.	ID=id3513;Note=6 probable transmembrane helices predicted for YE1938 by TMHMM2.0 at aa 34-56%2C 71-89%2C 123-145%2C 155-177%2C184-206 and 246-268;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2118563	2118631	.	+	.	ID=id3513;Note=6 probable transmembrane helices predicted for YE1938 by TMHMM2.0 at aa 34-56%2C 71-89%2C 123-145%2C 155-177%2C184-206 and 246-268;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2118650	2118718	.	+	.	ID=id3513;Note=6 probable transmembrane helices predicted for YE1938 by TMHMM2.0 at aa 34-56%2C 71-89%2C 123-145%2C 155-177%2C184-206 and 246-268;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2118836	2118904	.	+	.	ID=id3513;Note=6 probable transmembrane helices predicted for YE1938 by TMHMM2.0 at aa 34-56%2C 71-89%2C 123-145%2C 155-177%2C184-206 and 246-268;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	2118560	2118592	.	+	.	ID=id3514;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2118764	2118796	.	+	.	ID=id3515;Note=PS00435 Peroxidases proximal heme-ligand signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00435
AM286415.1	EMBL	gene	2118978	2120108	.	+	.	ID=gene1911;Name=YE1939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1939
AM286415.1	EMBL	CDS	2118978	2120108	.	+	0	ID=cds1846;Parent=gene1911;Dbxref=EnsemblGenomes-Gn:YE1939,EnsemblGenomes-Tr:CAL12018,InterPro:IPR008972,InterPro:IPR028096,UniProtKB/TrEMBL:A1JMT4,NCBI_GP:CAL12018.1;Name=CAL12018.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12018.1;transl_table=11
AM286415.1	EMBL	gene	2120360	2121415	.	+	.	ID=gene1912;Name=YE1940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1940
AM286415.1	EMBL	CDS	2120360	2121415	.	+	0	ID=cds1847;Parent=gene1912;Dbxref=EnsemblGenomes-Gn:YE1940,EnsemblGenomes-Tr:CAL12019,GOA:A1JMT7,InterPro:IPR006313,InterPro:IPR006314,InterPro:IPR011008,UniProtKB/TrEMBL:A1JMT7,NCBI_GP:CAL12019.1;Name=CAL12019.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12019.1;transl_table=11
AM286415.1	EMBL	gene	2121474	2122073	.	-	.	ID=gene1913;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=YE1941
AM286415.1	EMBL	CDS	2121474	2122073	.	-	0	ID=cds1848;Parent=gene1913;Dbxref=EnsemblGenomes-Gn:YE1941,EnsemblGenomes-Tr:CAL12020,GOA:A1JMU2,InterPro:IPR005025,InterPro:IPR008254,InterPro:IPR010089,InterPro:IPR029039,NCBI_GP:CAL12020.1;Name=CAL12020.1;gbkey=CDS;gene=wrbA;product=trp repressor binding protein;protein_id=CAL12020.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2121642	2122067	.	-	.	ID=id3516;Note=Pfam match to entry PF00258 flavodoxin%2C Flavodoxin%2C score 92.0%2C E-value 7.6e-25;gbkey=misc_feature;gene=wrbA;inference=protein motif:PFAM:PF00258
AM286415.1	EMBL	gene	2122243	2122725	.	-	.	ID=gene1914;Name=YE1942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1942
AM286415.1	EMBL	CDS	2122243	2122725	.	-	0	ID=cds1849;Parent=gene1914;Dbxref=EnsemblGenomes-Gn:YE1942,EnsemblGenomes-Tr:CAL12021,GOA:A1JMU6,InterPro:IPR001387,InterPro:IPR010982,InterPro:IPR025698,UniProtKB/TrEMBL:A1JMU6,NCBI_GP:CAL12021.1;Name=CAL12021.1;Note=The database hits for the predicted product of this CDS are restricted to its H-T-H DNA-binding motif: Vibrio cholerae biovar eltor hypothetical protein SWALL:Q939J0 (EMBL:AY035340) (136 aa) fasta scores: E(): 8.6e-06%2C 53.7 id in 54 aa and to Salmonella typhimurium fels-1 prophage%2Cpredicted transcriptional regulator Stm0898 SWALL:Q8ZQI4 (EMBL:AE008737) (231 aa) fasta scores: E(): 0.041%2C 42.62 id in 61 aa;gbkey=CDS;inference=similar to sequence:INSDC:AY035340;product=putative DNA-binding protein;protein_id=CAL12021.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2122381	2122440	.	-	.	ID=id3517;Note=2 probable transmembrane helices predicted for YE1942 by TMHMM2.0 at aa 96-115 and 119-141;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2122303	2122371	.	-	.	ID=id3517;Note=2 probable transmembrane helices predicted for YE1942 by TMHMM2.0 at aa 96-115 and 119-141;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2122549	2122710	.	-	.	ID=id3518;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 53.6%2C E-value 2.8e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	2122618	2122683	.	-	.	ID=id3519;Note=Predicted helix-turn-helix motif with score 1995.000%2C SD 5.98 at aa 15-36%2C sequence WSQEQLAELCSLNVRTIQRIEN;gbkey=misc_feature
AM286415.1	EMBL	gene	2123059	2124237	.	+	.	ID=gene1915;Name=YE1943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1943
AM286415.1	EMBL	CDS	2123059	2124237	.	+	0	ID=cds1850;Parent=gene1915;Dbxref=EnsemblGenomes-Gn:YE1943,EnsemblGenomes-Tr:CAL12022,GOA:A1JMV0,InterPro:IPR006652,InterPro:IPR015915,InterPro:IPR019936,NCBI_GP:CAL12022.1;Name=CAL12022.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12022.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2123095	2123163	.	+	.	ID=id3520;Note=1 probable transmembrane helix predicted for YE1943 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	2123326	2123484	.	+	.	ID=id3521;Note=Pfam match to entry PF01344 Kelch%2C Kelch motif %2Cscore 46.5%2C E-value 3.9e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF01344
AM286415.1	EMBL	sequence_feature	2123674	2123733	.	+	.	ID=id3522;Note=Pfam match to entry PF01344 Kelch%2C Kelch motif %2Cscore 8.8%2C E-value 0.046;gbkey=misc_feature;inference=protein motif:PFAM:PF01344
AM286415.1	EMBL	sequence_feature	2123821	2123844	.	+	.	ID=id3523;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2124441	2125778	.	-	.	ID=gene1916;Name=YE1944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1944
AM286415.1	EMBL	CDS	2124441	2125778	.	-	0	ID=cds1851;Parent=gene1916;Dbxref=EnsemblGenomes-Gn:YE1944,EnsemblGenomes-Tr:CAL12023,GOA:A1JMV5,InterPro:IPR006042,InterPro:IPR006043,InterPro:IPR019918,UniProtKB/TrEMBL:A1JMV5,NCBI_GP:CAL12023.1;Name=CAL12023.1;Note=Similar to many permeases including: Escherichia coli%2C and Escherichia coli O157:H7 uracil permease UraA or b2497 or z3760 or ecs3359 SWALL:URAA_ECOLI (SWALL:P33780) (429 aa) fasta scores: E(): 9.9e-46%2C 37.35 38d in 423 aa%2CEscherichia coli putative purine permease YcdG or b1006 SWALL:YCDG_ECOLI (SWALL:P75892) (442 aa) fasta scores: E(): 6.4e-121%2C 78.6 38d in 430 aa and to Bacillus caldolyticus uracil permease PyrP SWALL:PYRP_BACCL (SWALL:P41006) (432 aa) fasta scores: E(): 3.9e-48%2C 37.85 id in 428 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75892;product=putative membrane permease;protein_id=CAL12023.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2125632	2125700	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2125551	2125619	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2125473	2125532	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2125377	2125445	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2125290	2125358	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2125209	2125262	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2125122	2125190	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2124996	2125064	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2124768	2124836	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2124672	2124740	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2124567	2124635	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2124504	2124557	.	-	.	ID=id3524;Note=12 probable transmembrane helices predicted for YE1944 by TMHMM2.0 at aa 27-49%2C 54-76%2C 83-102%2C 112-134%2C141-163%2C 173-190%2C 197-219%2C 239-261%2C 315-337%2C 347-369%2C382-404 and 408-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2124567	2125691	.	-	.	ID=id3525;Note=Pfam match to entry PF00860 xan_ur_permease%2CPermease family%2C score 442.2%2C E-value 2.9e-130;gbkey=misc_feature;inference=protein motif:PFAM:PF00860
AM286415.1	EMBL	sequence_feature	2124675	2124737	.	-	.	ID=id3526;Note=PS01116 Xanthine/uracil permeases family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01116
AM286415.1	EMBL	sequence_feature	2125422	2125454	.	-	.	ID=id3527;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2125848	2126396	.	-	.	ID=gene1917;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=YE1945
AM286415.1	EMBL	CDS	2125848	2126396	.	-	0	ID=cds1852;Parent=gene1917;Dbxref=EnsemblGenomes-Gn:YE1945,EnsemblGenomes-Tr:CAL12024,GOA:A1JMW4,InterPro:IPR002563,InterPro:IPR012349,InterPro:IPR019917,NCBI_GP:CAL12024.1;Name=CAL12024.1;gbkey=CDS;gene=hpaC;product=4-hydroxyphenylacetate 3-monooxygenase coupling protein;protein_id=CAL12024.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2125863	2126306	.	-	.	ID=id3528;Note=Pfam match to entry PF01613 Flavin_Reduct%2C Flavin reductase like domain%2C score 200.0%2C E-value 2.4e-57;gbkey=misc_feature;gene=hpaC;inference=protein motif:PFAM:PF01613
AM286415.1	EMBL	gene	2126447	2127037	.	-	.	ID=gene1918;Name=YE1946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1946
AM286415.1	EMBL	CDS	2126447	2127037	.	-	0	ID=cds1853;Parent=gene1918;Dbxref=EnsemblGenomes-Gn:YE1946,EnsemblGenomes-Tr:CAL12025,GOA:A1JMW8,InterPro:IPR000415,InterPro:IPR023936,InterPro:IPR029479,NCBI_GP:CAL12025.1;Name=CAL12025.1;Note=Weakly similar to Escherichia coli oxygen-insensitive NAD NfnB or nfsi or nfsb or ntr or dpra or b0578 SWALL:NFNB_ECOLI (SWALL:P38489) (217 aa) fasta scores: E(): 1.1%2C 25 38d in 180 aa. Also similar to many other proposed dehydrogenases e.g. Escherichia coli putative NADH dehydrogenase/NAD ycdi or b1008 SWALL:YCDI_ECOLI (SWALL:P75894) (196 aa) fasta scores: E(): 2.6e-53%2C 67.85 38d in 196 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75894;product=putative oxidoreductase;protein_id=CAL12025.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2126555	2127013	.	-	.	ID=id3529;Note=Pfam match to entry PF00881 Nitroreductase%2CNitroreductase family%2C score 29.0%2C E-value 1.7e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00881
AM286415.1	EMBL	sequence_feature	2126630	2126662	.	-	.	ID=id3530;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2127049	2127885	.	-	.	ID=gene1919;Name=YE1947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1947
AM286415.1	EMBL	CDS	2127049	2127885	.	-	0	ID=cds1854;Parent=gene1919;Dbxref=EnsemblGenomes-Gn:YE1947,EnsemblGenomes-Tr:CAL12026,GOA:A1JMX1,InterPro:IPR000073,InterPro:IPR019913,InterPro:IPR029058,NCBI_GP:CAL12026.1;Name=CAL12026.1;Note=Similar to Agrobacterium tumefaciens hydrolase Atu2497 or agr_c_4537 SWALL:Q8UCI8 (EMBL:AE009196) (281 aa) fasta scores: E(): 2e-46%2C 46.48 38d in 256 aa and Acinetobacter calcoaceticus 3-oxoadipate enol-lactonase I PcaD SWALL:ELH1_ACICA (SWALL:Q59093) (266 aa) fasta scores: E(): 2.4e-11%2C 28.8 38d in 250 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q59093;product=putative hydrolase;protein_id=CAL12026.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2127121	2127768	.	-	.	ID=id3531;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 85.1%2C E-value 9.4e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00561
AM286415.1	EMBL	gene	2127918	2128307	.	-	.	ID=gene1920;Name=YE1948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1948
AM286415.1	EMBL	CDS	2127918	2128307	.	-	0	ID=cds1855;Parent=gene1920;Dbxref=EnsemblGenomes-Gn:YE1948,EnsemblGenomes-Tr:CAL12027,GOA:A1JMX4,InterPro:IPR006175,InterPro:IPR013813,InterPro:IPR019897,InterPro:IPR019898,NCBI_GP:CAL12027.1;Name=CAL12027.1;Note=Similar to many proteins of undefined function including: Caulobacter crescentus hypothetical protein Cc2796 SWALL:Q9A4N4 (EMBL:AE005945) (129 aa) fasta scores: E(): 2.3e-37%2C 75.78 38d in 128 aa and Escherichia coli hypothetical protein YdK or b1010 SWALL:YCDK_ECOLI (SWALL:P75896) (128 aa) fasta scores: E(): 7.6e-37%2C 72.65 id in 128 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75896;product=conserved hypothetical protein;protein_id=CAL12027.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2127927	2128277	.	-	.	ID=id3532;Note=Pfam match to entry PF01042 UPF0076%2CEndoribonuclease L-PSP%2C score 147.4%2C E-value 1.6e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF01042
AM286415.1	EMBL	sequence_feature	2127945	2128001	.	-	.	ID=id3533;Note=PS01094 Uncharacterized protein family UPF0076 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01094
AM286415.1	EMBL	gene	2128354	2129046	.	-	.	ID=gene1921;Name=YE1949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1949
AM286415.1	EMBL	CDS	2128354	2129046	.	-	0	ID=cds1856;Parent=gene1921;Dbxref=EnsemblGenomes-Gn:YE1949,EnsemblGenomes-Tr:CAL12028,GOA:A1JMX8,InterPro:IPR000868,InterPro:IPR019916,NCBI_GP:CAL12028.1;Name=CAL12028.1;Note=Similar to many proposed isochorismatases including: Escherichia coli hypothetical isochorismatase family protein YcdL or b1011 SWALL:YCDL_ECOLI (SWALL:P75897) (230 aa) fasta scores: E(): 1.7e-72%2C 79.73 id in 222 aa and to Escherichia coli O157:H7 hypothetical isochorismatase family protein YcdL or z1510 or ecs1257 SWALL:YCDL_ECO57 (SWALL:Q8XAU3) (230 aa) fasta scores: E(): 7.8e-72%2C 78.82 38d in 222 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q8XAU3;product=putative isochorismatase;protein_id=CAL12028.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2128393	2129013	.	-	.	ID=id3534;Note=Pfam match to entry PF00857 Isochorismatase%2CIsochorismatase family%2C score 285.6%2C E-value 4e-83;gbkey=misc_feature;inference=protein motif:PFAM:PF00857
AM286415.1	EMBL	gene	2129142	2130245	.	-	.	ID=gene1922;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=YE1950
AM286415.1	EMBL	CDS	2129142	2130245	.	-	0	ID=cds1857;Parent=gene1922;Dbxref=EnsemblGenomes-Gn:YE1950,EnsemblGenomes-Tr:CAL12029,GOA:A1JMY1,InterPro:IPR011251,InterPro:IPR019914,NCBI_GP:CAL12029.1;Name=CAL12029.1;gbkey=CDS;gene=ssuD;product=alkanesulfonate monooxygenase;protein_id=CAL12029.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2129199	2130245	.	-	.	ID=id3535;Note=Pfam match to entry PF00296 bac_luciferase%2CLuciferase-like monooxygenase%2C score -76.2%2C E-value 0.0024;gbkey=misc_feature;gene=ssuD;inference=protein motif:PFAM:PF00296
AM286415.1	EMBL	gene	2130561	2131229	.	+	.	ID=gene1923;Name=YE1951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1951
AM286415.1	EMBL	CDS	2130561	2131229	.	+	0	ID=cds1858;Parent=gene1923;Dbxref=EnsemblGenomes-Gn:YE1951,EnsemblGenomes-Tr:CAL12030,GOA:A1JMY4,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR013573,InterPro:IPR015893,UniProtKB/TrEMBL:A1JMY4,NCBI_GP:CAL12030.1;Name=CAL12030.1;Note=Similar to many proposed transcriptional regulators including: Salmonella typhimurium putative transcriptional repressor YcdC or Stm1122 SWALL:Q8ZQ38 (EMBL:AE008748) (212 aa) fasta scores: E(): 7.6e-51%2C 61.83 38d in 207 aa%2CEscherichia coli hypothetical transcriptional regulator YcdC or b1013 SWALL:YCDC_ECOLI (SWALL:P75899) (212 aa) fasta scores: E(): 1.2e-48%2C 60.89 38d in 202 aa and Agrobacterium tumefaciens transcriptional regulator%2C TetR family atu2384 or agr_c_4325 SWALL:Q8UCU9 (EMBL:AE009186) (213 aa) fasta scores: E(): 5e-33%2C 43.56 38d in 202 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75899;product=putative TetR-family transcriptional regulatory protein;protein_id=CAL12030.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2130645	2130785	.	+	.	ID=id3536;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 71.0%2C E-value 1.6e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00440
AM286415.1	EMBL	sequence_feature	2130693	2130758	.	+	.	ID=id3537;Note=Predicted helix-turn-helix motif with score 1115.000%2C SD 2.98 at aa 45-66%2C sequence TSLDQVAERADVSKTNLLYYFP;gbkey=misc_feature
AM286415.1	EMBL	gene	2131475	2132905	.	-	.	ID=gene1924;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=YE1952
AM286415.1	EMBL	CDS	2131475	2132905	.	-	0	ID=cds1859;Parent=gene1924;Dbxref=EnsemblGenomes-Gn:YE1952,EnsemblGenomes-Tr:CAL12031,GOA:A1JMY6,InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB/TrEMBL:A1JMY6,NCBI_GP:CAL12031.1;Name=CAL12031.1;gbkey=CDS;gene=cycA;product=D-serine/D-alanine/glycine transporter;protein_id=CAL12031.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2131511	2132842	.	-	.	ID=id3538;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 676.4%2C E-value 9e-201;gbkey=misc_feature;gene=cycA;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	2132741	2132809	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2132672	2132731	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2132546	2132614	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2132450	2132518	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2132345	2132413	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2132201	2132269	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2132075	2132143	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2131964	2132032	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2131802	2131870	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2131706	2131774	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2131604	2131672	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2131517	2131576	.	-	.	ID=id3539;Note=12 probable transmembrane helices predicted for YE1952 by TMHMM2.0 at aa 33-55%2C 59-78%2C 98-120%2C 130-152%2C165-187%2C 213-235%2C 255-277%2C 292-314%2C 346-368%2C 378-400%2C412-434 and 444-463;gbkey=misc_feature;gene=cycA;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2131841	2131873	.	-	.	ID=id3540;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cycA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2132651	2132743	.	-	.	ID=id3541;Note=PS00218 Amino acid permeases signature.;gbkey=misc_feature;gene=cycA;inference=protein motif:Prosite:PS00218
AM286415.1	EMBL	gene	2133260	2133335	.	+	.	ID=gene1925;Name=tRNA-Lys (CTT);gbkey=Gene;gene=tRNA-Lys (CTT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2133260	2133335	.	+	.	ID=rna85;Parent=gene1925;gbkey=tRNA;gene=tRNA-Lys (CTT);product=tRNA-Lys
AM286415.1	EMBL	exon	2133260	2133335	.	+	.	ID=id3542;Parent=rna85;gbkey=tRNA;gene=tRNA-Lys (CTT);product=tRNA-Lys
AM286415.1	EMBL	pseudogene	2133792	2134244	.	-	.	ID=gene1926;Name=YE1953;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1953;pseudo=true
AM286415.1	EMBL	CDS	2133792	2134244	.	-	0	ID=cds1860;Parent=gene1926;Note=Similar to the very C-terminus of Bacteriophage P2 phage protein D SWALL:VPD_BPP2 (SWALL:P10312) (387 aa) fasta scores: E(): 4.1e-38%2C 75.16 38d in 149 aa and to Bacteriophage 186 late control protein D SWALL:VPD_BP186 (SWALL:P21679) (389 aa) fasta scores: E(): 7.4e-39%2C 75.67 id in 148 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P21679;product=bacteriophage late control protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	pseudogene	2134253	2134506	.	-	.	ID=gene1927;Name=YE1954;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE1954;pseudo=true
AM286415.1	EMBL	CDS	2134345	2134506	.	-	0	ID=cds1861;Parent=gene1927;Note=Similar to the very N-termini of Bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 2.6e-23%2C 84.33 id in 83 aa and Bacteriophage 186 similar to p2 tail sheath protein FI SWALL:Q37844 (EMBL:U32222) (392 aa) fasta scores: E(): 1.5e-22%2C 83.33 38d in 84 aa. Note this CDS also contains a frameshift mutation following codon 54;gbkey=CDS;inference=similar to sequence:UniProtKB:P22501;product=bacteriophage major tail sheath protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2134253	2134342	.	-	0	ID=cds1861;Parent=gene1927;Note=Similar to the very N-termini of Bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 2.6e-23%2C 84.33 id in 83 aa and Bacteriophage 186 similar to p2 tail sheath protein FI SWALL:Q37844 (EMBL:U32222) (392 aa) fasta scores: E(): 1.5e-22%2C 83.33 38d in 84 aa. Note this CDS also contains a frameshift mutation following codon 54;gbkey=CDS;inference=similar to sequence:UniProtKB:P22501;product=bacteriophage major tail sheath protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	2134685	2135071	.	-	.	ID=gene1928;Name=YE1955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1955
AM286415.1	EMBL	CDS	2134685	2135071	.	-	0	ID=cds1862;Parent=gene1928;Dbxref=EnsemblGenomes-Gn:YE1955,EnsemblGenomes-Tr:CAL12034,InterPro:IPR011051,InterPro:IPR013096,InterPro:IPR014710,UniProtKB/TrEMBL:A1JN01,NCBI_GP:CAL12034.1;Name=CAL12034.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12034.1;transl_table=11
AM286415.1	EMBL	gene	2135627	2136328	.	-	.	ID=gene1929;Name=YE1956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1956
AM286415.1	EMBL	CDS	2135627	2136328	.	-	0	ID=cds1863;Parent=gene1929;Dbxref=EnsemblGenomes-Gn:YE1956,EnsemblGenomes-Tr:CAL12035,GOA:A1JN03,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR013656,InterPro:IPR016032,UniProtKB/TrEMBL:A1JN03,NCBI_GP:CAL12035.1;Name=CAL12035.1;Note=Weakly similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1347 SWALL:Q9I3Z7 (EMBL:AE004564) (230 aa) fasta scores: E(): 3.6e-09%2C 26.6 id in 203 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004564;product=putative LuxR-family transcriptional regulatory protein;protein_id=CAL12035.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2135669	2135866	.	-	.	ID=id3543;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 32.9%2C E-value 4.7e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	2135747	2135812	.	-	.	ID=id3544;Note=Predicted helix-turn-helix motif with score 1799.000%2C SD 5.31 at aa 173-194%2C sequence LNAKEIATRLNLSHRTITNKLQ;gbkey=misc_feature
AM286415.1	EMBL	gene	2136413	2137696	.	-	.	ID=gene1930;Name=YE1957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1957
AM286415.1	EMBL	CDS	2136413	2137696	.	-	0	ID=cds1864;Parent=gene1930;Dbxref=EnsemblGenomes-Gn:YE1957,EnsemblGenomes-Tr:CAL12036,GOA:A1JN05,InterPro:IPR001248,UniProtKB/TrEMBL:A1JN05,NCBI_GP:CAL12036.1;Name=CAL12036.1;Note=Similar to Escherichia coli cytosine permease CodB or b0336 SWALL:CODB_ECOLI (SWALL:P25525) (419 aa) fasta scores: E(): 6.5e-20%2C 28.06 38d in 424 aa and to Bacillus halodurans cytosine permease bh1882 SWALL:Q9KBP3 (EMBL:AP001513) (445 aa) fasta scores: E(): 1.5e-31%2C31.83 38d in 377 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P25525;product=putative purine and pyrimidine permease;protein_id=CAL12036.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2136425	2137648	.	-	.	ID=id3545;Note=Pfam match to entry PF02133 Transp_cyt_pur%2CPermease for cytosine/purines%2C uracil%2C thiamine%2C allantoin%2C score -6.3%2C E-value 2e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF02133
AM286415.1	EMBL	sequence_feature	2137571	2137639	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2137460	2137528	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2137331	2137399	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2137235	2137303	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2137148	2137216	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2137046	2137105	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2136941	2137009	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2136854	2136913	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2136704	2136772	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2136620	2136688	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2136497	2136559	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2136428	2136487	.	-	.	ID=id3546;Note=12 probable transmembrane helices predicted for YE1957 by TMHMM2.0 at aa 20-42%2C 57-79%2C 100-122%2C 132-154%2C161-183%2C 198-217%2C 230-252%2C 262-281%2C 309-331%2C 337-359%2C380-400 and 404-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	2137909	2138673	.	+	.	ID=gene1931;Name=YE1958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1958
AM286415.1	EMBL	CDS	2137909	2138673	.	+	0	ID=cds1865;Parent=gene1931;Dbxref=EnsemblGenomes-Gn:YE1958,EnsemblGenomes-Tr:CAL12037,GOA:A1JN10,InterPro:IPR000014,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR013656,InterPro:IPR016032,UniProtKB/TrEMBL:A1JN10,NCBI_GP:CAL12037.1;Name=CAL12037.1;Note=Similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1347 SWALL:Q9I3Z7 (EMBL:AE004564) (230 aa) fasta scores: E(): 1.5e-09%2C27.57 38d in 214 aa and Vibrio cholerae transcriptional regulator%2C LuxR family vca1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 1.3e-07%2C24.05 38d in 237 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004564;product=putative LuxR-family transcriptional regulatory protein;protein_id=CAL12037.1;transl_table=11
AM286415.1	EMBL	gene	2138910	2139644	.	-	.	ID=gene1932;Name=YE1959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1959
AM286415.1	EMBL	CDS	2138910	2139644	.	-	0	ID=cds1866;Parent=gene1932;Dbxref=EnsemblGenomes-Gn:YE1959,EnsemblGenomes-Tr:CAL12038,GOA:A1JN12,InterPro:IPR013216,InterPro:IPR029063,UniProtKB/TrEMBL:A1JN12,NCBI_GP:CAL12038.1;Name=CAL12038.1;Note=Similar to several including: Stigmatella aurantiaca methyl transferase SWALL:CAD19079 (EMBL:AJ421825) (242 aa) fasta scores: E(): 2e-54%2C 54.13 id in 242 aa and Brucella melitensis ubiquinone/menaquinone biosynthesis methyltransferase UbiE bmei1834 SWALL:Q8YEP4 (EMBL:AE009616) (262 aa) fasta scores: E(): 7.4e-53%2C 52.91 38d in 240 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ421825;product=conserved hypothetical protein;protein_id=CAL12038.1;transl_table=11
AM286415.1	EMBL	gene	2140048	2140545	.	+	.	ID=gene1933;Name=YE1960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1960
AM286415.1	EMBL	CDS	2140048	2140545	.	+	0	ID=cds1867;Parent=gene1933;Dbxref=EnsemblGenomes-Gn:YE1960,EnsemblGenomes-Tr:CAL12039,UniProtKB/TrEMBL:A1JN16,NCBI_GP:CAL12039.1;Name=CAL12039.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12039.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2140150	2140209	.	+	.	ID=id3547;Note=4 probable transmembrane helices predicted for YE1960 by TMHMM2.0 at aa 35-54%2C 58-76%2C 89-111 and 126-145;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2140219	2140275	.	+	.	ID=id3547;Note=4 probable transmembrane helices predicted for YE1960 by TMHMM2.0 at aa 35-54%2C 58-76%2C 89-111 and 126-145;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2140312	2140380	.	+	.	ID=id3547;Note=4 probable transmembrane helices predicted for YE1960 by TMHMM2.0 at aa 35-54%2C 58-76%2C 89-111 and 126-145;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2140423	2140482	.	+	.	ID=id3547;Note=4 probable transmembrane helices predicted for YE1960 by TMHMM2.0 at aa 35-54%2C 58-76%2C 89-111 and 126-145;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2140627	2140956	.	-	.	ID=gene1934;Name=YE1961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1961
AM286415.1	EMBL	CDS	2140627	2140956	.	-	0	ID=cds1868;Parent=gene1934;Dbxref=EnsemblGenomes-Gn:YE1961,EnsemblGenomes-Tr:CAL12040,InterPro:IPR011051,InterPro:IPR014710,UniProtKB/TrEMBL:A1JN20,NCBI_GP:CAL12040.1;Name=CAL12040.1;Note=Similar to Ralstonia solanacearum hypothetical protein Rsc1958 or rs03532 SWALL:Q8XY05 (EMBL:AL646067) (113 aa) fasta scores: E(): 1.3e-28%2C 63.71 38d in 113 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646067;product=conserved hypothetical protein;protein_id=CAL12040.1;transl_table=11
AM286415.1	EMBL	gene	2141101	2142600	.	+	.	ID=gene1935;Name=amyA;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=YE1962
AM286415.1	EMBL	CDS	2141101	2142600	.	+	0	ID=cds1869;Parent=gene1935;Dbxref=EnsemblGenomes-Gn:YE1962,EnsemblGenomes-Tr:CAL12041,GOA:A1JN22,InterPro:IPR006047,InterPro:IPR006589,InterPro:IPR013776,InterPro:IPR013780,InterPro:IPR013781,InterPro:IPR015902,InterPro:IPR017853,UniProtKB/TrEMBL:A1JN22,NCBI_GP:CAL12041.1;Name=CAL12041.1;Note=Similar to Escherichia coli cytoplasmic alpha-amylase AmyA or b1927 SWALL:AMY2_ECOLI (SWALL:P26612) (495 aa) fasta scores: E(): 1.1e-141%2C65.72 38d in 493 aa%2C Salmonella typhimurium cytoplasmic alpha-amylase AmyA or stm1963 SWALL:AMY2_SALTY (SWALL:P26613) (494 aa) fasta scores: E(): 1.5e-141%2C 65.3 id in 490 aa and to Bacillus licheniformis alpha-amylase precursor AmyS or AmyL SWALL:AMY_BACLI (SWALL:P06278) (512 aa) fasta scores: E(): 2.9e-80%2C 42.19 38d in 493 aa;gbkey=CDS;gene=amyA;inference=similar to sequence:UniProtKB:P26613;product=alpha-amylase;protein_id=CAL12041.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2141113	2142306	.	+	.	ID=id3548;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C catalytic domain%2C score 246.5%2C E-value 2.4e-71;gbkey=misc_feature;gene=amyA;inference=protein motif:PFAM:PF00128
AM286415.1	EMBL	gene	2142879	2143127	.	-	.	ID=gene1936;Name=YE1963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1963
AM286415.1	EMBL	CDS	2142879	2143127	.	-	0	ID=cds1870;Parent=gene1936;Dbxref=EnsemblGenomes-Gn:YE1963,EnsemblGenomes-Tr:CAL12042,UniProtKB/TrEMBL:A1JN25,NCBI_GP:CAL12042.1;Name=CAL12042.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=exported protein;protein_id=CAL12042.1;transl_table=11
AM286415.1	EMBL	gene	2143724	2146396	.	+	.	ID=gene1937;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;gene_synonym=acn;locus_tag=YE1964
AM286415.1	EMBL	CDS	2143724	2146396	.	+	0	ID=cds1871;Parent=gene1937;Dbxref=EnsemblGenomes-Gn:YE1964,EnsemblGenomes-Tr:CAL12043,GOA:A1JN28,InterPro:IPR000573,InterPro:IPR001030,InterPro:IPR006249,InterPro:IPR015928,InterPro:IPR015931,InterPro:IPR015932,InterPro:IPR015934,InterPro:IPR015937,InterPro:IPR018136,UniProtKB/TrEMBL:A1JN28,NCBI_GP:CAL12043.1;Name=CAL12043.1;gbkey=CDS;gene=acnA;product=aconitate hydratase 1;protein_id=CAL12043.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2143892	2145409	.	+	.	ID=id3549;Note=Pfam match to entry PF00330 aconitase%2C Aconitase family (aconitate hydratase)%2C score 914.9%2C E-value 1.5e-272;gbkey=misc_feature;gene=acnA;inference=protein motif:PFAM:PF00330
AM286415.1	EMBL	sequence_feature	2144996	2145028	.	+	.	ID=id3550;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=acnA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2145002	2145052	.	+	.	ID=id3551;Note=PS00450 Aconitase family signature 1.;gbkey=misc_feature;gene=acnA;inference=protein motif:Prosite:PS00450
AM286415.1	EMBL	sequence_feature	2145194	2145226	.	+	.	ID=id3552;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=acnA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2145200	2145241	.	+	.	ID=id3553;Note=PS01244 Aconitase family signature 2.;gbkey=misc_feature;gene=acnA;inference=protein motif:Prosite:PS01244
AM286415.1	EMBL	sequence_feature	2145788	2146306	.	+	.	ID=id3554;Note=Pfam match to entry PF00694 Aconitase_C%2C Aconitase C-terminal domain%2C score 277.6%2C E-value 1e-80;gbkey=misc_feature;gene=acnA;inference=protein motif:PFAM:PF00694
AM286415.1	EMBL	gene	2146643	2147233	.	-	.	ID=gene1938;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=YE1965
AM286415.1	EMBL	CDS	2146643	2147233	.	-	0	ID=cds1872;Parent=gene1938;Dbxref=EnsemblGenomes-Gn:YE1965,EnsemblGenomes-Tr:CAL12044,GOA:A1JN33,InterPro:IPR000926,UniProtKB/TrEMBL:A1JN33,NCBI_GP:CAL12044.1;Name=CAL12044.1;gbkey=CDS;gene=ribA;product=GTP cyclohydrolase II;protein_id=CAL12044.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2146721	2147233	.	-	.	ID=id3555;Note=Pfam match to entry PF00925 GTP_cyclohydro2%2C GTP cyclohydrolase II%2C score 380.2%2C E-value 1.3e-111;gbkey=misc_feature;gene=ribA;inference=protein motif:PFAM:PF00925
AM286415.1	EMBL	sequence_feature	2147126	2147158	.	-	.	ID=id3556;Note=PS00626 Regulator of chromosome condensation (RCC1) signature 2.;gbkey=misc_feature;gene=ribA;inference=protein motif:Prosite:PS00626
AM286415.1	EMBL	gene	2147575	2148336	.	+	.	ID=gene1939;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=YE1966
AM286415.1	EMBL	CDS	2147575	2148336	.	+	0	ID=cds1873;Parent=gene1939;Dbxref=EnsemblGenomes-Gn:YE1966,EnsemblGenomes-Tr:CAL12045,GOA:A1JN34,InterPro:IPR000326,UniProtKB/TrEMBL:A1JN34,NCBI_GP:CAL12045.1;Name=CAL12045.1;gbkey=CDS;gene=pgpB;product=phosphatidylglycerophosphatase B;protein_id=CAL12045.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2147593	2147661	.	+	.	ID=id3557;Note=6 probable transmembrane helices predicted for YE1966 by TMHMM2.0 at aa 7-29%2C 49-68%2C 75-92%2C 157-179%2C186-208 and 212-234;gbkey=misc_feature;gene=pgpB;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2147719	2147778	.	+	.	ID=id3557;Note=6 probable transmembrane helices predicted for YE1966 by TMHMM2.0 at aa 7-29%2C 49-68%2C 75-92%2C 157-179%2C186-208 and 212-234;gbkey=misc_feature;gene=pgpB;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2147797	2147850	.	+	.	ID=id3557;Note=6 probable transmembrane helices predicted for YE1966 by TMHMM2.0 at aa 7-29%2C 49-68%2C 75-92%2C 157-179%2C186-208 and 212-234;gbkey=misc_feature;gene=pgpB;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2148043	2148111	.	+	.	ID=id3557;Note=6 probable transmembrane helices predicted for YE1966 by TMHMM2.0 at aa 7-29%2C 49-68%2C 75-92%2C 157-179%2C186-208 and 212-234;gbkey=misc_feature;gene=pgpB;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2148130	2148198	.	+	.	ID=id3557;Note=6 probable transmembrane helices predicted for YE1966 by TMHMM2.0 at aa 7-29%2C 49-68%2C 75-92%2C 157-179%2C186-208 and 212-234;gbkey=misc_feature;gene=pgpB;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2148208	2148276	.	+	.	ID=id3557;Note=6 probable transmembrane helices predicted for YE1966 by TMHMM2.0 at aa 7-29%2C 49-68%2C 75-92%2C 157-179%2C186-208 and 212-234;gbkey=misc_feature;gene=pgpB;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	2147719	2148279	.	+	.	ID=id3558;Note=Pfam match to entry PF01569 PAP2%2C PAP2 superfamily%2C score 58.0%2C E-value 1.3e-14;gbkey=misc_feature;gene=pgpB;inference=protein motif:PFAM:PF01569
AM286415.1	EMBL	gene	2148532	2148843	.	+	.	ID=gene1940;Name=YE1967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1967
AM286415.1	EMBL	CDS	2148532	2148843	.	+	0	ID=cds1874;Parent=gene1940;Dbxref=EnsemblGenomes-Gn:YE1967,EnsemblGenomes-Tr:CAL12046,InterPro:IPR010445,UniProtKB/TrEMBL:A1JN36,NCBI_GP:CAL12046.1;Name=CAL12046.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12046.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2148544	2148600	.	+	.	ID=id3559;Note=2 probable transmembrane helices predicted for YE1967 by TMHMM2.0 at aa 5-23 and 43-65;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2148658	2148726	.	+	.	ID=id3559;Note=2 probable transmembrane helices predicted for YE1967 by TMHMM2.0 at aa 5-23 and 43-65;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2148640	2148702	.	+	.	ID=id3560;Note=PS00079 Multicopper oxidases signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00079
AM286415.1	EMBL	gene	2148850	2150019	.	+	.	ID=gene1941;Name=YE1968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1968
AM286415.1	EMBL	CDS	2148850	2150019	.	+	0	ID=cds1875;Parent=gene1941;Dbxref=EnsemblGenomes-Gn:YE1968,EnsemblGenomes-Tr:CAL12047,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,UniProtKB/TrEMBL:A1JN37,NCBI_GP:CAL12047.1;Name=CAL12047.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12047.1;transl_table=11
AM286415.1	EMBL	gene	2150076	2150366	.	-	.	ID=gene1942;Name=YE1969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1969
AM286415.1	EMBL	CDS	2150076	2150366	.	-	0	ID=cds1876;Parent=gene1942;Dbxref=EnsemblGenomes-Gn:YE1969,EnsemblGenomes-Tr:CAL12048,GOA:A1JM19,InterPro:IPR010985,InterPro:IPR013321,UniProtKB/TrEMBL:A1JM19,NCBI_GP:CAL12048.1;Name=CAL12048.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12048.1;transl_table=11
AM286415.1	EMBL	gene	2150571	2151032	.	-	.	ID=gene1943;Name=YE1970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1970
AM286415.1	EMBL	CDS	2150571	2151032	.	-	0	ID=cds1877;Parent=gene1943;Dbxref=EnsemblGenomes-Gn:YE1970,EnsemblGenomes-Tr:CAL12049,GOA:A1JM20,InterPro:IPR001387,InterPro:IPR010982,InterPro:IPR011051,InterPro:IPR013096,InterPro:IPR014710,UniProtKB/TrEMBL:A1JM20,NCBI_GP:CAL12049.1;Name=CAL12049.1;Note=Similar to many putative transcriptional regulators including: Salmonella typhi putative DNA-binding protein Sty1459 SWALL:Q8Z752 (EMBL:AL627270) (178 aa) fasta scores: E(): 1.4e-36%2C 54.34 38d in 184 aa%2C Vibrio cholerae transcriptional regulator%2C hth_3 family Vc1968 SWALL:Q9KQN0 (EMBL:AE004272) (181 aa) fasta scores: E(): 3.6e-24%2C 46.62 38d in 178 aa and Ralstonia solanacearum putative transcription regulator protein Rsp0962 or Rs02293 SWALL:Q8XR97 (EMBL:AL646082) (182 aa) fasta scores: E(): 1.9e-13%2C 33.53 38d in 164 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646082;product=putative DNA-binding protein;protein_id=CAL12049.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2150940	2151104	.	-	.	ID=id3561;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 64.8%2C E-value 1.2e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	2151012	2151077	.	-	.	ID=id3562;Note=Predicted helix-turn-helix motif with score 1596.000%2C SD 4.62 at aa 38-59%2C sequence WSLSQTAEQTGVSKAMLGQIER;gbkey=misc_feature
AM286415.1	EMBL	gene	2151310	2152512	.	+	.	ID=gene1944;Name=YE1971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1971
AM286415.1	EMBL	CDS	2151310	2152512	.	+	0	ID=cds1878;Parent=gene1944;Dbxref=EnsemblGenomes-Gn:YE1971,EnsemblGenomes-Tr:CAL12050,GOA:A1JM22,InterPro:IPR004711,UniProtKB/TrEMBL:A1JM22,NCBI_GP:CAL12050.1;Name=CAL12050.1;Note=Similar to many including: Acinetobacter calcoaceticus benzoate membrane transport protein BenE SWALL:BENE_ACICA (SWALL:P07775) (394 aa) fasta scores: E(): 1.8e-53%2C 41.62 38d in 382 aa and to Salmonella typhimurium putative benzoate membrane transport protein Stm1606 SWALL:Q8ZPC5 (EMBL:AE008770) (392 aa) fasta scores: E(): 2e-79%2C 58.53 38d in 381 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P07775;product=probable membrane transport protein;protein_id=CAL12050.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2151331	2152464	.	+	.	ID=id3563;Note=Pfam match to entry PF03594 BenE%2C Benzoate membrane transport protein%2C score 609.9%2C E-value 9.5e-181;gbkey=misc_feature;inference=protein motif:PFAM:PF03594
AM286415.1	EMBL	sequence_feature	2151439	2151507	.	+	.	ID=id3564;Note=10 probable transmembrane helices predicted for YE1971 by TMHMM2.0 at aa 44-66%2C 73-94%2C 98-120%2C 127-149%2C169-191%2C 198-220%2C 251-273%2C 294-316%2C 321-343 and 364-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	2151526	2151591	.	+	.	ID=id3564;Note=10 probable transmembrane helices predicted for YE1971 by TMHMM2.0 at aa 44-66%2C 73-94%2C 98-120%2C 127-149%2C169-191%2C 198-220%2C 251-273%2C 294-316%2C 321-343 and 364-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	2151601	2151669	.	+	.	ID=id3564;Note=10 probable transmembrane helices predicted for YE1971 by TMHMM2.0 at aa 44-66%2C 73-94%2C 98-120%2C 127-149%2C169-191%2C 198-220%2C 251-273%2C 294-316%2C 321-343 and 364-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	2151688	2151756	.	+	.	ID=id3564;Note=10 probable transmembrane helices predicted for YE1971 by TMHMM2.0 at aa 44-66%2C 73-94%2C 98-120%2C 127-149%2C169-191%2C 198-220%2C 251-273%2C 294-316%2C 321-343 and 364-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	2151814	2151882	.	+	.	ID=id3564;Note=10 probable transmembrane helices predicted for YE1971 by TMHMM2.0 at aa 44-66%2C 73-94%2C 98-120%2C 127-149%2C169-191%2C 198-220%2C 251-273%2C 294-316%2C 321-343 and 364-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	2151901	2151969	.	+	.	ID=id3564;Note=10 probable transmembrane helices predicted for YE1971 by TMHMM2.0 at aa 44-66%2C 73-94%2C 98-120%2C 127-149%2C169-191%2C 198-220%2C 251-273%2C 294-316%2C 321-343 and 364-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	2152060	2152128	.	+	.	ID=id3564;Note=10 probable transmembrane helices predicted for YE1971 by TMHMM2.0 at aa 44-66%2C 73-94%2C 98-120%2C 127-149%2C169-191%2C 198-220%2C 251-273%2C 294-316%2C 321-343 and 364-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	2152189	2152257	.	+	.	ID=id3564;Note=10 probable transmembrane helices predicted for YE1971 by TMHMM2.0 at aa 44-66%2C 73-94%2C 98-120%2C 127-149%2C169-191%2C 198-220%2C 251-273%2C 294-316%2C 321-343 and 364-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	2152270	2152338	.	+	.	ID=id3564;Note=10 probable transmembrane helices predicted for YE1971 by TMHMM2.0 at aa 44-66%2C 73-94%2C 98-120%2C 127-149%2C169-191%2C 198-220%2C 251-273%2C 294-316%2C 321-343 and 364-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	2152399	2152467	.	+	.	ID=id3564;Note=10 probable transmembrane helices predicted for YE1971 by TMHMM2.0 at aa 44-66%2C 73-94%2C 98-120%2C 127-149%2C169-191%2C 198-220%2C 251-273%2C 294-316%2C 321-343 and 364-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	2152586	2152846	.	-	.	ID=gene1945;Name=YE1972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1972
AM286415.1	EMBL	CDS	2152586	2152846	.	-	0	ID=cds1879;Parent=gene1945;Dbxref=EnsemblGenomes-Gn:YE1972,EnsemblGenomes-Tr:CAL12051,InterPro:IPR010854,InterPro:IPR025543,UniProtKB/TrEMBL:A1JM25,NCBI_GP:CAL12051.1;Name=CAL12051.1;Note=Similar to many including: Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein precursor YcfR or B1112 or Z1751 or Ecs1490 SWALL:YCFR_ECOLI (SWALL:P75953) (85 aa) fasta scores: E(): 7.1e-12%2C 57.47 id in 87 aa and to Yersinia pestis putative exported protein Ypo2521 SWALL:Q8ZDN9 (EMBL:AJ414152) (86 aa) fasta scores: E(): 1e-10%2C 47.67 38d in 86 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75953;product=putative exported protein;protein_id=CAL12051.1;transl_table=11
AM286415.1	EMBL	gene	2153197	2153937	.	+	.	ID=gene1946;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=YE1973
AM286415.1	EMBL	CDS	2153197	2153937	.	+	0	ID=cds1880;Parent=gene1946;Dbxref=EnsemblGenomes-Gn:YE1973,EnsemblGenomes-Tr:CAL12052,GOA:A1JM26,InterPro:IPR001754,InterPro:IPR011060,InterPro:IPR013785,InterPro:IPR014732,InterPro:IPR018089,NCBI_GP:CAL12052.1;Name=CAL12052.1;gbkey=CDS;gene=pyrF;product=orotidine 5'-phosphate decarboxylase;protein_id=CAL12052.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2153239	2153907	.	+	.	ID=id3565;Note=Pfam match to entry PF00215 OMPdecase%2C Orotidine 5'-phosphate decarboxylase / HUMPS family%2C score 321.3%2CE-value 7.5e-94;gbkey=misc_feature;gene=pyrF;inference=protein motif:PFAM:PF00215
AM286415.1	EMBL	sequence_feature	2153398	2153439	.	+	.	ID=id3566;Note=PS00156 Orotidine 5'-phosphate decarboxylase active site.;gbkey=misc_feature;gene=pyrF;inference=protein motif:Prosite:PS00156
AM286415.1	EMBL	gene	2153934	2154272	.	+	.	ID=gene1947;Name=YE1974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1974
AM286415.1	EMBL	CDS	2153934	2154272	.	+	0	ID=cds1881;Parent=gene1947;Dbxref=EnsemblGenomes-Gn:YE1974,EnsemblGenomes-Tr:CAL12053,GOA:A1JM06,InterPro:IPR001950,InterPro:IPR005872,UniProtKB/TrEMBL:A1JM06,NCBI_GP:CAL12053.1;Name=CAL12053.1;gbkey=CDS;product=translation initiation factor SUI1 family protein;protein_id=CAL12053.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2153952	2154257	.	+	.	ID=id3567;Note=Pfam match to entry PF01253 SUI1%2C Translation initiation factor SUI1%2C score 156.8%2C E-value 2.4e-44;gbkey=misc_feature;inference=protein motif:PFAM:PF01253
AM286415.1	EMBL	sequence_feature	2154177	2154200	.	+	.	ID=id3568;Note=PS01118 Translation initiation factor SUI1 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01118
AM286415.1	EMBL	gene	2154538	2154750	.	-	.	ID=gene1948;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=YE1975
AM286415.1	EMBL	CDS	2154538	2154750	.	-	0	ID=cds1882;Parent=gene1948;Dbxref=EnsemblGenomes-Gn:YE1975,EnsemblGenomes-Tr:CAL12054,GOA:A1JM08,InterPro:IPR008816,UniProtKB/TrEMBL:A1JM08,NCBI_GP:CAL12054.1;Name=CAL12054.1;gbkey=CDS;gene=osmB;product=osmotically inducible lipoprotein B precursor;protein_id=CAL12054.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2154682	2154714	.	-	.	ID=id3569;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=osmB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2155187	2155882	.	+	.	ID=gene1949;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=YE1976
AM286415.1	EMBL	CDS	2155187	2155882	.	+	0	ID=cds1883;Parent=gene1949;Dbxref=EnsemblGenomes-Gn:YE1976,EnsemblGenomes-Tr:CAL12055,GOA:A1JM10,InterPro:IPR001303,InterPro:IPR004661,UniProtKB/TrEMBL:A1JM10,NCBI_GP:CAL12055.1;Name=CAL12055.1;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=CAL12055.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2155205	2155840	.	+	.	ID=id3570;Note=Pfam match to entry PF00596 Aldolase_II%2C Class II Aldolase and Adducin N-terminal domain%2C score 344.8%2CE-value 6.2e-101;gbkey=misc_feature;gene=araD;inference=protein motif:PFAM:PF00596
AM286415.1	EMBL	gene	2155909	2156157	.	-	.	ID=gene1950;Name=YE1977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1977
AM286415.1	EMBL	CDS	2155909	2156157	.	-	0	ID=cds1884;Parent=gene1950;Dbxref=EnsemblGenomes-Gn:YE1977,EnsemblGenomes-Tr:CAL12056,InterPro:IPR018680,UniProtKB/TrEMBL:A1JM11,NCBI_GP:CAL12056.1;Name=CAL12056.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12056.1;transl_table=11
AM286415.1	EMBL	gene	2156203	2156949	.	-	.	ID=gene1951;Name=YE1978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1978
AM286415.1	EMBL	CDS	2156203	2156949	.	-	0	ID=cds1885;Parent=gene1951;Dbxref=EnsemblGenomes-Gn:YE1978,EnsemblGenomes-Tr:CAL12057,GOA:A1JM13,InterPro:IPR001034,InterPro:IPR011991,InterPro:IPR014036,InterPro:IPR018356,UniProtKB/TrEMBL:A1JM13,NCBI_GP:CAL12057.1;Name=CAL12057.1;Note=Similar to many DeoR-family regulatory proteins including: Escherichia coli glucitol operon repressor SrlR or GutR or b2707 SWALL:SRLR_ECOLI (SWALL:P15082) (257 aa) fasta scores: E(): 1.2e-19%2C 33.2 38d in 256 aa%2C and to Salmonella typhimurium%2C and Salmonella typhi putative regulatory protein%2C DeoR family Stm1704 or Sty1347 SWALL:Q8XEP5 (EMBL:AE008775) (250 aa) fasta scores: E(): 1.7e-54%2C 60.72 38d in 247 aa and Pseudomonas aeruginosa glycerol-3-phosphate regulon repressor GlpR or pa3583 SWALL:GLPR_PSEAE (SWALL:Q51391) (251 aa) fasta scores: E(): 2.1e-17%2C 29.2 38d in 250 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q51391;product=putative DeoR-family regulatory protein;protein_id=CAL12057.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2156275	2156940	.	-	.	ID=id3571;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 142.6%2C E-value 4.6e-40;gbkey=misc_feature;inference=protein motif:PFAM:PF00455
AM286415.1	EMBL	sequence_feature	2156833	2156898	.	-	.	ID=id3572;Note=Predicted helix-turn-helix motif with score 1303.000%2C SD 3.62 at aa 19-40%2C sequence VSVSELSQVTHVSEVTIRQDLN;gbkey=misc_feature
AM286415.1	EMBL	gene	2157145	2157810	.	+	.	ID=gene1952;Name=mipB;gbkey=Gene;gene=mipB;gene_biotype=protein_coding;locus_tag=YE1979
AM286415.1	EMBL	CDS	2157145	2157810	.	+	0	ID=cds1886;Parent=gene1952;Dbxref=EnsemblGenomes-Gn:YE1979,EnsemblGenomes-Tr:CAL12058,GOA:A1JM28,InterPro:IPR001585,InterPro:IPR004731,InterPro:IPR013785,InterPro:IPR018225,UniProtKB/TrEMBL:A1JM28,NCBI_GP:CAL12058.1;Name=CAL12058.1;gbkey=CDS;gene=mipB;product=putative transaldolase;protein_id=CAL12058.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2157148	2157798	.	+	.	ID=id3573;Note=Pfam match to entry PF00923 Transaldolase%2CTransaldolase%2C score 275.5%2C E-value 4.5e-80;gbkey=misc_feature;gene=mipB;inference=protein motif:PFAM:PF00923
AM286415.1	EMBL	sequence_feature	2157214	2157240	.	+	.	ID=id3574;Note=PS01054 Transaldolase signature 1.;gbkey=misc_feature;gene=mipB;inference=protein motif:Prosite:PS01054
AM286415.1	EMBL	sequence_feature	2157388	2157441	.	+	.	ID=id3575;Note=PS00958 Transaldolase active site.;gbkey=misc_feature;gene=mipB;inference=protein motif:Prosite:PS00958
AM286415.1	EMBL	gene	2158046	2158378	.	-	.	ID=gene1953;Name=YE1980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1980
AM286415.1	EMBL	CDS	2158046	2158378	.	-	0	ID=cds1887;Parent=gene1953;Dbxref=EnsemblGenomes-Gn:YE1980,EnsemblGenomes-Tr:CAL12059,InterPro:IPR007423,UniProtKB/TrEMBL:A1JM30,NCBI_GP:CAL12059.1;Name=CAL12059.1;Note=Similar to Yersinia pestis hypothetical protein Ypo2233 SWALL:Q8ZEE0 (EMBL:AJ414151) (101 aa) fasta scores: E(): 4.2e-29%2C 70.9 38d in 110 aa and to Yersinia pestis KIM hypothetical Y2075 SWALL:AAM85639 (EMBL:AE013810) (109 aa) fasta scores: E(): 4.4e-29%2C 70 id in 110 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=conserved hypothetical protein;protein_id=CAL12059.1;transl_table=11
AM286415.1	EMBL	gene	2158371	2160437	.	-	.	ID=gene1954;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=YE1981
AM286415.1	EMBL	CDS	2158371	2160437	.	-	0	ID=cds1888;Parent=gene1954;Dbxref=EnsemblGenomes-Gn:YE1981,EnsemblGenomes-Tr:CAL12060,GOA:A1JM29,InterPro:IPR003706,InterPro:IPR025299,UniProtKB/TrEMBL:A1JM29,NCBI_GP:CAL12060.1;Name=CAL12060.1;gbkey=CDS;gene=cstA;product=putative carbon starvation protein A;protein_id=CAL12060.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2160351	2160419	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=1/18
AM286415.1	EMBL	sequence_feature	2160270	2160338	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=2/18
AM286415.1	EMBL	sequence_feature	2160105	2160173	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=3/18
AM286415.1	EMBL	sequence_feature	2160024	2160092	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=4/18
AM286415.1	EMBL	sequence_feature	2159895	2159963	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=5/18
AM286415.1	EMBL	sequence_feature	2159799	2159867	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=6/18
AM286415.1	EMBL	sequence_feature	2159706	2159774	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=7/18
AM286415.1	EMBL	sequence_feature	2159610	2159678	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=8/18
AM286415.1	EMBL	sequence_feature	2159529	2159597	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=9/18
AM286415.1	EMBL	sequence_feature	2159403	2159471	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=10/18
AM286415.1	EMBL	sequence_feature	2159286	2159354	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=11/18
AM286415.1	EMBL	sequence_feature	2159184	2159243	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=12/18
AM286415.1	EMBL	sequence_feature	2159079	2159138	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=13/18
AM286415.1	EMBL	sequence_feature	2158992	2159051	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=14/18
AM286415.1	EMBL	sequence_feature	2158839	2158907	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=15/18
AM286415.1	EMBL	sequence_feature	2158743	2158811	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=16/18
AM286415.1	EMBL	sequence_feature	2158656	2158724	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=17/18
AM286415.1	EMBL	sequence_feature	2158452	2158520	.	-	.	ID=id3576;Note=18 probable transmembrane helices predicted for YE1981 by TMHMM2.0 at aa 7-29%2C 34-56%2C 89-111%2C 116-138%2C159-181%2C 191-213%2C 222-244%2C 254-276%2C 281-303%2C 323-345%2C362-384%2C 399-418%2C 434-453%2C 463-482%2C 511-533%2C 543-565%2C572-594 and 640-662;gbkey=misc_feature;gene=cstA;inference=protein motif:TMHMM:2.0;part=18/18
AM286415.1	EMBL	sequence_feature	2158869	2158901	.	-	.	ID=id3577;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cstA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2159145	2160344	.	-	.	ID=id3578;Note=Pfam match to entry PF02554 CstA%2C Carbon starvation protein CstA%2C score 842.0%2C E-value 1.3e-250;gbkey=misc_feature;gene=cstA;inference=protein motif:PFAM:PF02554
AM286415.1	EMBL	sequence_feature	2159433	2159465	.	-	.	ID=id3579;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cstA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2160306	2160338	.	-	.	ID=id3580;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cstA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2160853	2162787	.	-	.	ID=gene1955;Name=rnb;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=YE1982
AM286415.1	EMBL	CDS	2160853	2162787	.	-	0	ID=cds1889;Parent=gene1955;Dbxref=EnsemblGenomes-Gn:YE1982,EnsemblGenomes-Tr:CAL12061,GOA:A1JM34,InterPro:IPR003029,InterPro:IPR004476,InterPro:IPR011129,InterPro:IPR011804,InterPro:IPR012340,InterPro:IPR013223,InterPro:IPR022966,InterPro:IPR022967,NCBI_GP:CAL12061.1;Name=CAL12061.1;gbkey=CDS;gene=rnb;product=exoribonuclease II;protein_id=CAL12061.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2160880	2161119	.	-	.	ID=id3581;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 29.9%2C E-value 3.9e-06;gbkey=misc_feature;gene=rnb;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	sequence_feature	2161264	2161338	.	-	.	ID=id3582;Note=PS01175 Ribonuclease II family signature.;gbkey=misc_feature;gene=rnb;inference=protein motif:Prosite:PS01175
AM286415.1	EMBL	sequence_feature	2161366	2162436	.	-	.	ID=id3583;Note=Pfam match to entry PF00773 RNB%2C RNB-like protein %2Cscore 341.8%2C E-value 5e-100;gbkey=misc_feature;gene=rnb;inference=protein motif:PFAM:PF00773
AM286415.1	EMBL	gene	2162982	2165303	.	-	.	ID=gene1956;Name=YE1983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1983
AM286415.1	EMBL	CDS	2162982	2165303	.	-	0	ID=cds1890;Parent=gene1956;Dbxref=EnsemblGenomes-Gn:YE1983,EnsemblGenomes-Tr:CAL12062,GOA:A1JM49,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR009010,InterPro:IPR010046,UniProtKB/TrEMBL:A1JM49,NCBI_GP:CAL12062.1;Name=CAL12062.1;Note=Similar to many including: Pseudomonas aeruginosa probable oxidoreductase Pa5181 SWALL:Q9HU08 (EMBL:AE004931) (773 aa) fasta scores: E(): 1.9e-184%2C60.13 38d in 760 aa%2C Ralstonia solanacearum putative formate dehydrogenase oxidoreductase protein Rsp1048 or Rs06130 SWALL:Q8XR20 (EMBL:AL646082) (779 aa) fasta scores: E(): 3.5e-164%2C 55.89 38d in 764 aa and to Escherichia coli formate dehydrogenase H FdhF or b4079 SWALL:FDHF_ECOLI (SWALL:P07658) (715 aa) fasta scores: E(): 3.4e-13%2C 25.69 38d in 685 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P07658;product=putative oxidoreductase;protein_id=CAL12062.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2163030	2163356	.	-	.	ID=id3584;Note=Pfam match to entry PF01568 Molydop_binding%2CMolydopterin dinucleotide binding domain%2C score 17.9%2CE-value 2.1e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01568
AM286415.1	EMBL	sequence_feature	2163405	2165090	.	-	.	ID=id3585;Note=Pfam match to entry PF00384 molybdopterin%2CMolybdopterin oxidoreductase%2C score 22.6%2C E-value 1.1e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00384
AM286415.1	EMBL	gene	2165838	2167073	.	+	.	ID=gene1957;Name=YE1984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1984
AM286415.1	EMBL	CDS	2165838	2167073	.	+	0	ID=cds1891;Parent=gene1957;Dbxref=EnsemblGenomes-Gn:YE1984,EnsemblGenomes-Tr:CAL12063,UniProtKB/TrEMBL:A1JM51,NCBI_GP:CAL12063.1;Name=CAL12063.1;Note=no significant database hits. Note the coiled-coil domains between residues 181..192%2C 237..256 and 292..312;gbkey=CDS;product=putative membrane protein;protein_id=CAL12063.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2166624	2166692	.	+	.	ID=id3586;Note=1 probable transmembrane helix predicted for YE1984 by TMHMM2.0 at aa 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2167117	2168151	.	+	.	ID=gene1958;Name=YE1985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1985
AM286415.1	EMBL	CDS	2167117	2168151	.	+	0	ID=cds1892;Parent=gene1958;Dbxref=EnsemblGenomes-Gn:YE1985,EnsemblGenomes-Tr:CAL12064,UniProtKB/TrEMBL:A1JM52,NCBI_GP:CAL12064.1;Name=CAL12064.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12064.1;transl_table=11
AM286415.1	EMBL	gene	2168315	2169385	.	-	.	ID=gene1959;Name=YE1986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1986
AM286415.1	EMBL	CDS	2168315	2169385	.	-	0	ID=cds1893;Parent=gene1959;Dbxref=EnsemblGenomes-Gn:YE1986,EnsemblGenomes-Tr:CAL12065,UniProtKB/TrEMBL:A1JM55,NCBI_GP:CAL12065.1;Name=CAL12065.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12065.1;transl_table=11
AM286415.1	EMBL	gene	2169525	2170166	.	-	.	ID=gene1960;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=YE1987
AM286415.1	EMBL	CDS	2169525	2170166	.	-	0	ID=cds1894;Parent=gene1960;Dbxref=EnsemblGenomes-Gn:YE1987,EnsemblGenomes-Tr:CAL12066,GOA:A1JM57,InterPro:IPR000445,InterPro:IPR003265,InterPro:IPR003583,InterPro:IPR003651,InterPro:IPR004035,InterPro:IPR004036,InterPro:IPR005759,InterPro:IPR011257,InterPro:IPR023170,UniProtKB/TrEMBL:A1JM57,NCBI_GP:CAL12066.1;Name=CAL12066.1;gbkey=CDS;gene=nth;product=endonuclease III;protein_id=CAL12066.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2169558	2169608	.	-	.	ID=id3587;Note=PS00764 Endonuclease III iron-sulfur binding region signature.;gbkey=misc_feature;gene=nth;inference=protein motif:Prosite:PS00764
AM286415.1	EMBL	sequence_feature	2169615	2170079	.	-	.	ID=id3588;Note=Pfam match to entry PF00730 HhH-GPD%2C HhH-GPD superfamily base excision DNA repair protein%2C score 254.4%2C E-value 1e-73;gbkey=misc_feature;gene=nth;inference=protein motif:PFAM:PF00730
AM286415.1	EMBL	sequence_feature	2169774	2169863	.	-	.	ID=id3589;Note=PS01155 Endonuclease III family signature.;gbkey=misc_feature;gene=nth;inference=protein motif:Prosite:PS01155
AM286415.1	EMBL	gene	2170163	2170864	.	-	.	ID=gene1961;Name=YE1988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1988
AM286415.1	EMBL	CDS	2170163	2170864	.	-	0	ID=cds1895;Parent=gene1961;Dbxref=EnsemblGenomes-Gn:YE1988,EnsemblGenomes-Tr:CAL12067,GOA:A1JM63,InterPro:IPR003667,InterPro:IPR010968,UniProtKB/TrEMBL:A1JM63,NCBI_GP:CAL12067.1;Name=CAL12067.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12067.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2170697	2170765	.	-	.	ID=id3590;Note=5 probable transmembrane helices predicted for YE1988 by TMHMM2.0 at aa 34-56%2C 69-86%2C 90-112%2C 124-146 and 184-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2170607	2170660	.	-	.	ID=id3590;Note=5 probable transmembrane helices predicted for YE1988 by TMHMM2.0 at aa 34-56%2C 69-86%2C 90-112%2C 124-146 and 184-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2170529	2170597	.	-	.	ID=id3590;Note=5 probable transmembrane helices predicted for YE1988 by TMHMM2.0 at aa 34-56%2C 69-86%2C 90-112%2C 124-146 and 184-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2170427	2170495	.	-	.	ID=id3590;Note=5 probable transmembrane helices predicted for YE1988 by TMHMM2.0 at aa 34-56%2C 69-86%2C 90-112%2C 124-146 and 184-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2170247	2170315	.	-	.	ID=id3590;Note=5 probable transmembrane helices predicted for YE1988 by TMHMM2.0 at aa 34-56%2C 69-86%2C 90-112%2C 124-146 and 184-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	2170262	2170864	.	-	.	ID=id3591;Note=Pfam match to entry PF02508 Rnf-Nqr%2C Rnf-Nqr subunit%2C membrane protein%2C score 369.9%2C E-value 1.7e-108;gbkey=misc_feature;inference=protein motif:PFAM:PF02508
AM286415.1	EMBL	sequence_feature	2170304	2170336	.	-	.	ID=id3592;Note=PS00284 Serpins signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00284
AM286415.1	EMBL	gene	2170861	2171490	.	-	.	ID=gene1962;Name=YE1989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1989
AM286415.1	EMBL	CDS	2170861	2171490	.	-	0	ID=cds1896;Parent=gene1962;Dbxref=EnsemblGenomes-Gn:YE1989,EnsemblGenomes-Tr:CAL12068,GOA:A1JM65,InterPro:IPR007329,InterPro:IPR010209,InterPro:IPR022989,UniProtKB/TrEMBL:A1JM65,NCBI_GP:CAL12068.1;Name=CAL12068.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12068.1;transl_table=11
AM286415.1	EMBL	gene	2171500	2172555	.	-	.	ID=gene1963;Name=YE1990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1990
AM286415.1	EMBL	CDS	2171500	2172555	.	-	0	ID=cds1897;Parent=gene1963;Dbxref=EnsemblGenomes-Gn:YE1990,EnsemblGenomes-Tr:CAL12069,GOA:A1JM66,InterPro:IPR004338,InterPro:IPR011303,NCBI_GP:CAL12069.1;Name=CAL12069.1;gbkey=CDS;product=putative integral membrane protein;protein_id=CAL12069.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2171515	2172555	.	-	.	ID=id3593;Note=Pfam match to entry PF03116 NQR2_RnfD_RnfE%2C NQR2%2CRnfD%2C RnfE family%2C score 512.1%2C E-value 2.7e-151;gbkey=misc_feature;inference=protein motif:PFAM:PF03116
AM286415.1	EMBL	sequence_feature	2172427	2172495	.	-	.	ID=id3594;Note=7 probable transmembrane helices predicted for YE1990 by TMHMM2.0 at aa 21-43%2C 93-115%2C 122-144%2C 210-232%2C237-259%2C 269-291 and 298-315;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	2172211	2172279	.	-	.	ID=id3594;Note=7 probable transmembrane helices predicted for YE1990 by TMHMM2.0 at aa 21-43%2C 93-115%2C 122-144%2C 210-232%2C237-259%2C 269-291 and 298-315;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	2172124	2172192	.	-	.	ID=id3594;Note=7 probable transmembrane helices predicted for YE1990 by TMHMM2.0 at aa 21-43%2C 93-115%2C 122-144%2C 210-232%2C237-259%2C 269-291 and 298-315;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	2171860	2171928	.	-	.	ID=id3594;Note=7 probable transmembrane helices predicted for YE1990 by TMHMM2.0 at aa 21-43%2C 93-115%2C 122-144%2C 210-232%2C237-259%2C 269-291 and 298-315;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	2171779	2171847	.	-	.	ID=id3594;Note=7 probable transmembrane helices predicted for YE1990 by TMHMM2.0 at aa 21-43%2C 93-115%2C 122-144%2C 210-232%2C237-259%2C 269-291 and 298-315;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	2171683	2171751	.	-	.	ID=id3594;Note=7 probable transmembrane helices predicted for YE1990 by TMHMM2.0 at aa 21-43%2C 93-115%2C 122-144%2C 210-232%2C237-259%2C 269-291 and 298-315;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	2171611	2171664	.	-	.	ID=id3594;Note=7 probable transmembrane helices predicted for YE1990 by TMHMM2.0 at aa 21-43%2C 93-115%2C 122-144%2C 210-232%2C237-259%2C 269-291 and 298-315;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	2171800	2171832	.	-	.	ID=id3595;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2173084	2173971	.	+	.	ID=gene1964;Name=YE1991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1991
AM286415.1	EMBL	CDS	2173084	2173971	.	+	0	ID=cds1898;Parent=gene1964;Dbxref=EnsemblGenomes-Gn:YE1991,EnsemblGenomes-Tr:CAL12070,GOA:A1JM80,InterPro:IPR009057,InterPro:IPR011256,InterPro:IPR018060,InterPro:IPR020449,InterPro:IPR029442,UniProtKB/TrEMBL:A1JM80,NCBI_GP:CAL12070.1;Name=CAL12070.1;gbkey=CDS;product=putative AraC-family transcriptional regulatory protein;protein_id=CAL12070.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2173117	2173254	.	+	.	ID=id3596;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 35.3%2C E-value 9.1e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	2173153	2173218	.	+	.	ID=id3597;Note=Predicted helix-turn-helix motif with score 1268.000%2C SD 3.51 at aa 24-45%2C sequence PTLDDVAKISGYSKWHLQRKFK;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	2173273	2173404	.	+	.	ID=id3598;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 51.1%2C E-value 1.6e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	2174009	2176102	.	-	.	ID=gene1965;Name=YE1992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1992
AM286415.1	EMBL	CDS	2174009	2176102	.	-	0	ID=cds1899;Parent=gene1965;Dbxref=EnsemblGenomes-Gn:YE1992,EnsemblGenomes-Tr:CAL12071,GOA:A1JM81,InterPro:IPR001450,InterPro:IPR009051,InterPro:IPR010208,InterPro:IPR011538,InterPro:IPR017896,InterPro:IPR017900,InterPro:IPR019554,InterPro:IPR026902,NCBI_GP:CAL12071.1;Name=CAL12071.1;gbkey=CDS;product=putative iron-sulfur binding NADH dehydrogenase;protein_id=CAL12071.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2174807	2174878	.	-	.	ID=id3599;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 20.8%2C E-value 9.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	2174822	2174857	.	-	.	ID=id3600;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	2174924	2174995	.	-	.	ID=id3601;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 19.8%2C E-value 0.00014;gbkey=misc_feature;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	2174939	2174974	.	-	.	ID=id3602;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	2175083	2175754	.	-	.	ID=id3603;Note=Pfam match to entry PF01512 Complex1_51K%2CRespiratory-chain NADH dehydrogenase 51 Kd subunit%2C score 249.1%2C E-value 4.1e-72;gbkey=misc_feature;inference=protein motif:PFAM:PF01512
AM286415.1	EMBL	gene	2176095	2176718	.	-	.	ID=gene1966;Name=YE1993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1993
AM286415.1	EMBL	CDS	2176095	2176718	.	-	0	ID=cds1900;Parent=gene1966;Dbxref=EnsemblGenomes-Gn:YE1993,EnsemblGenomes-Tr:CAL12072,GOA:A1JM84,InterPro:IPR007202,InterPro:IPR010207,InterPro:IPR016463,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JM84,NCBI_GP:CAL12072.1;Name=CAL12072.1;gbkey=CDS;product=putative iron-sulfur protein;protein_id=CAL12072.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2176230	2176301	.	-	.	ID=id3604;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 29.4%2C E-value 4.3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	2176245	2176280	.	-	.	ID=id3605;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	2176320	2176391	.	-	.	ID=id3606;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 33.1%2C E-value 4.2e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	2176335	2176370	.	-	.	ID=id3607;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	2176641	2176709	.	-	.	ID=id3608;Note=1 probable transmembrane helix predicted for YE1993 by TMHMM2.0 at aa 4-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2176718	2177299	.	-	.	ID=gene1967;Name=YE1994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1994
AM286415.1	EMBL	CDS	2176718	2177299	.	-	0	ID=cds1901;Parent=gene1967;Dbxref=EnsemblGenomes-Gn:YE1994,EnsemblGenomes-Tr:CAL12073,GOA:A1JM88,InterPro:IPR003667,InterPro:IPR011293,NCBI_GP:CAL12073.1;Name=CAL12073.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12073.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2176724	2177299	.	-	.	ID=id3609;Note=Pfam match to entry PF02508 Rnf-Nqr%2C Rnf-Nqr subunit%2C membrane protein%2C score 368.7%2C E-value 3.9e-108;gbkey=misc_feature;inference=protein motif:PFAM:PF02508
AM286415.1	EMBL	sequence_feature	2177219	2177287	.	-	.	ID=id3610;Note=6 probable transmembrane helices predicted for YE1994 by TMHMM2.0 at aa 5-27%2C 37-56%2C 63-85%2C 100-122%2C135-154 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2177132	2177191	.	-	.	ID=id3610;Note=6 probable transmembrane helices predicted for YE1994 by TMHMM2.0 at aa 5-27%2C 37-56%2C 63-85%2C 100-122%2C135-154 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2177045	2177113	.	-	.	ID=id3610;Note=6 probable transmembrane helices predicted for YE1994 by TMHMM2.0 at aa 5-27%2C 37-56%2C 63-85%2C 100-122%2C135-154 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2176934	2177002	.	-	.	ID=id3610;Note=6 probable transmembrane helices predicted for YE1994 by TMHMM2.0 at aa 5-27%2C 37-56%2C 63-85%2C 100-122%2C135-154 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2176838	2176897	.	-	.	ID=id3610;Note=6 probable transmembrane helices predicted for YE1994 by TMHMM2.0 at aa 5-27%2C 37-56%2C 63-85%2C 100-122%2C135-154 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2176727	2176795	.	-	.	ID=id3610;Note=6 probable transmembrane helices predicted for YE1994 by TMHMM2.0 at aa 5-27%2C 37-56%2C 63-85%2C 100-122%2C135-154 and 169-191;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	2177649	2178092	.	-	.	ID=gene1968;Name=YE1996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1996
AM286415.1	EMBL	CDS	2177649	2178092	.	-	0	ID=cds1902;Parent=gene1968;Dbxref=EnsemblGenomes-Gn:YE1996,EnsemblGenomes-Tr:CAL12074,InterPro:IPR019690,UniProtKB/TrEMBL:A1JM89,NCBI_GP:CAL12074.1;Name=CAL12074.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12074.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2177988	2178056	.	-	.	ID=id3611;Note=4 probable transmembrane helices predicted for YE1996 by TMHMM2.0 at aa 13-35%2C 55-77%2C 90-112 and 116-133;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2177862	2177930	.	-	.	ID=id3611;Note=4 probable transmembrane helices predicted for YE1996 by TMHMM2.0 at aa 13-35%2C 55-77%2C 90-112 and 116-133;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2177757	2177825	.	-	.	ID=id3611;Note=4 probable transmembrane helices predicted for YE1996 by TMHMM2.0 at aa 13-35%2C 55-77%2C 90-112 and 116-133;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2177694	2177747	.	-	.	ID=id3611;Note=4 probable transmembrane helices predicted for YE1996 by TMHMM2.0 at aa 13-35%2C 55-77%2C 90-112 and 116-133;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2178160	2179965	.	-	.	ID=gene1969;Name=YE1997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1997
AM286415.1	EMBL	CDS	2178160	2179965	.	-	0	ID=cds1903;Parent=gene1969;Dbxref=EnsemblGenomes-Gn:YE1997,EnsemblGenomes-Tr:CAL12075,GOA:A1JMA3,InterPro:IPR000559,InterPro:IPR020628,InterPro:IPR027417,NCBI_GP:CAL12075.1;Name=CAL12075.1;Note=Similar to many Prokaryotic and Eukaryotic Spinacia oleracea mono-functional formate--tetrahydrofolate ligase SWALL:FTHS_SPIOL (SWALL:P28723) (636 aa) fasta scores: E(): 2.8e-69%2C 44.87 38d in 624 aa%2C Vibrio cholerae formate--tetrahydrofolate ligase Vca0614 SWALL:Q9KLX7 (EMBL:AE004391) (599 aa) fasta scores: E(): 4.7e-118%2C54.37 38d in 583 aa and to Arabidopsis thaliana 10-formyltetrahydrofolate synthetase ThfS or f11f12.17 or f17j6.2 or at1g50480 SWALL:Q9SPK5 (EMBL:AF162279) (634 aa) fasta scores: E(): 1.8e-71%2C 45.41 38d in 621 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P28723;product=probable formate--tetrahydrofolate ligase;protein_id=CAL12075.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2178163	2179884	.	-	.	ID=id3612;Note=Pfam match to entry PF01268 FTHFS%2CFormate--tetrahydrofolate ligase%2C score 855.6%2C E-value 1.1e-254;gbkey=misc_feature;inference=protein motif:PFAM:PF01268
AM286415.1	EMBL	gene	2180469	2182595	.	+	.	ID=gene1970;Name=YE1998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1998
AM286415.1	EMBL	CDS	2180469	2182595	.	+	0	ID=cds1904;Parent=gene1970;Dbxref=EnsemblGenomes-Gn:YE1998,EnsemblGenomes-Tr:CAL12076,GOA:A1JMA6,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005074,InterPro:IPR010132,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMA6,NCBI_GP:CAL12076.1;Name=CAL12076.1;gbkey=CDS;product=putative RTX-family toxin transporter;protein_id=CAL12076.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2180910	2181722	.	+	.	ID=id3613;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 177.9%2C E-value 1.1e-50;gbkey=misc_feature;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	2180919	2180987	.	+	.	ID=id3614;Note=5 probable transmembrane helices predicted for YE1998 by TMHMM2.0 at aa 151-173%2C 183-205%2C 258-280%2C285-304 and 385-407;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2181015	2181083	.	+	.	ID=id3614;Note=5 probable transmembrane helices predicted for YE1998 by TMHMM2.0 at aa 151-173%2C 183-205%2C 258-280%2C285-304 and 385-407;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2181240	2181308	.	+	.	ID=id3614;Note=5 probable transmembrane helices predicted for YE1998 by TMHMM2.0 at aa 151-173%2C 183-205%2C 258-280%2C285-304 and 385-407;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2181321	2181380	.	+	.	ID=id3614;Note=5 probable transmembrane helices predicted for YE1998 by TMHMM2.0 at aa 151-173%2C 183-205%2C 258-280%2C285-304 and 385-407;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2181621	2181689	.	+	.	ID=id3614;Note=5 probable transmembrane helices predicted for YE1998 by TMHMM2.0 at aa 151-173%2C 183-205%2C 258-280%2C285-304 and 385-407;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	2181936	2182490	.	+	.	ID=id3615;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 234.8%2C E-value 8e-68;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2181957	2181980	.	+	.	ID=id3616;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2182269	2182313	.	+	.	ID=id3617;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	2182592	2183986	.	+	.	ID=gene1971;Name=YE1999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE1999
AM286415.1	EMBL	CDS	2182592	2183986	.	+	0	ID=cds1905;Parent=gene1971;Dbxref=EnsemblGenomes-Gn:YE1999,EnsemblGenomes-Tr:CAL12077,GOA:A1JMA9,InterPro:IPR003997,InterPro:IPR006144,InterPro:IPR010129,UniProtKB/TrEMBL:A1JMA9,NCBI_GP:CAL12077.1;Name=CAL12077.1;Note=Highly similar to many hemolysin transport proteins including: Vibrio cholerae hemolysin secretion protein RtxD protein SWALL:Q9X4W5 (EMBL:AF119150) (467 aa) fasta scores: E(): 1.9e-55%2C 39.77 38d in 450 aa%2C Pasteurella haemolytica leukotoxin secretion protein D LktD SWALL:HLYD_PASHA (SWALL:P16534) (478 aa) fasta scores: E(): 2e-42%2C 34.79 38d in 457 aa and Escherichia coli hemolysin secretion protein D%2C plasmid HlyD SWALL:HLYD_ECOLI (SWALL:P06739) (478 aa) fasta scores: E(): 1.7e-41%2C 36.32 38d in 457 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P16534;product=hemolysin transport protein;protein_id=CAL12077.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2182754	2182807	.	+	.	ID=id3618;Note=1 probable transmembrane helix predicted for YE1999 by TMHMM2.0 at aa 55-72;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	2182856	2183773	.	+	.	ID=id3619;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 78.3%2C E-value 1.1e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	sequence_feature	2183873	2183941	.	+	.	ID=id3620;Note=PS00543 HlyD family secretion proteins signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00543
AM286415.1	EMBL	gene	2183989	2186121	.	+	.	ID=gene1972;Name=YE2000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2000
AM286415.1	EMBL	CDS	2183989	2186121	.	+	0	ID=cds1906;Parent=gene1972;Dbxref=EnsemblGenomes-Gn:YE2000,EnsemblGenomes-Tr:CAL12078,GOA:A1JMB1,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005074,InterPro:IPR010132,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMB1,NCBI_GP:CAL12078.1;Name=CAL12078.1;gbkey=CDS;product=putative toxin transport protein;protein_id=CAL12078.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2184460	2185269	.	+	.	ID=id3621;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 141.3%2C E-value 1.1e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	2184466	2184534	.	+	.	ID=id3622;Note=5 probable transmembrane helices predicted for YE2000 by TMHMM2.0 at aa 160-182%2C 197-219%2C 267-289%2C294-316 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2184577	2184645	.	+	.	ID=id3622;Note=5 probable transmembrane helices predicted for YE2000 by TMHMM2.0 at aa 160-182%2C 197-219%2C 267-289%2C294-316 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2184787	2184855	.	+	.	ID=id3622;Note=5 probable transmembrane helices predicted for YE2000 by TMHMM2.0 at aa 160-182%2C 197-219%2C 267-289%2C294-316 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2184868	2184936	.	+	.	ID=id3622;Note=5 probable transmembrane helices predicted for YE2000 by TMHMM2.0 at aa 160-182%2C 197-219%2C 267-289%2C294-316 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2185138	2185206	.	+	.	ID=id3622;Note=5 probable transmembrane helices predicted for YE2000 by TMHMM2.0 at aa 160-182%2C 197-219%2C 267-289%2C294-316 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	2185483	2186037	.	+	.	ID=id3623;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 219.8%2C E-value 2.7e-63;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2185504	2185527	.	+	.	ID=id3624;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2185816	2185860	.	+	.	ID=id3625;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	2186355	2187857	.	-	.	ID=gene1973;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=YE2001
AM286415.1	EMBL	CDS	2186355	2187857	.	-	0	ID=cds1907;Parent=gene1973;Dbxref=EnsemblGenomes-Gn:YE2001,EnsemblGenomes-Tr:CAL12079,GOA:A1JMB6,InterPro:IPR003762,InterPro:IPR004216,InterPro:IPR009015,InterPro:IPR024664,NCBI_GP:CAL12079.1;Name=CAL12079.1;gbkey=CDS;gene=araA;product=L-arabinose isomerase;protein_id=CAL12079.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2186358	2187857	.	-	.	ID=id3626;Note=Pfam match to entry PF02610 Arabinose_Isome%2CL-arabinose isomerase%2C score 1219.6%2C E-value 0;gbkey=misc_feature;gene=araA;inference=protein motif:PFAM:PF02610
AM286415.1	EMBL	gene	2187915	2189567	.	-	.	ID=gene1974;Name=araB;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=YE2002
AM286415.1	EMBL	CDS	2187915	2189567	.	-	0	ID=cds1908;Parent=gene1974;Dbxref=EnsemblGenomes-Gn:YE2002,EnsemblGenomes-Tr:CAL12080,GOA:A1JMC1,InterPro:IPR005929,InterPro:IPR018485,UniProtKB/TrEMBL:A1JMC1,NCBI_GP:CAL12080.1;Name=CAL12080.1;gbkey=CDS;gene=araB;product=L-ribulokinase;protein_id=CAL12080.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2187987	2188736	.	-	.	ID=id3627;Note=Pfam match to entry PF02782 FGGY_C%2C FGGY family of carbohydrate kinases%2C C-terminal domain%2C score 18.9%2CE-value 5.9e-08;gbkey=misc_feature;gene=araB;inference=protein motif:PFAM:PF02782
AM286415.1	EMBL	sequence_feature	2188743	2189567	.	-	.	ID=id3628;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C N-terminal domain%2C score -60.9%2CE-value 8.5e-06;gbkey=misc_feature;gene=araB;inference=protein motif:PFAM:PF00370
AM286415.1	EMBL	gene	2190066	2191049	.	+	.	ID=gene1975;Name=araF;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=YE2003
AM286415.1	EMBL	CDS	2190066	2191049	.	+	0	ID=cds1909;Parent=gene1975;Dbxref=EnsemblGenomes-Gn:YE2003,EnsemblGenomes-Tr:CAL12081,GOA:A1JMC8,InterPro:IPR001761,InterPro:IPR026266,InterPro:IPR028082,UniProtKB/TrEMBL:A1JMC8,NCBI_GP:CAL12081.1;Name=CAL12081.1;gbkey=CDS;gene=araF;product=L-arabinose-binding periplasmic protein precursor;protein_id=CAL12081.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2190138	2191025	.	+	.	ID=id3629;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 320.4%2C E-value 1.4e-93;gbkey=misc_feature;gene=araF;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	2191221	2192699	.	+	.	ID=gene1976;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=YE2004
AM286415.1	EMBL	CDS	2191221	2192699	.	+	0	ID=cds1910;Parent=gene1976;Dbxref=EnsemblGenomes-Gn:YE2004,EnsemblGenomes-Tr:CAL12082,GOA:A1JMD3,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR017917,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMD3,NCBI_GP:CAL12082.1;Name=CAL12082.1;gbkey=CDS;gene=araG;product=L-arabinose transport ATP-binding protein;protein_id=CAL12082.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2191260	2191820	.	+	.	ID=id3630;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 222.9%2C E-value 3.1e-64;gbkey=misc_feature;gene=araG;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2191281	2191304	.	+	.	ID=id3631;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=araG;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2192007	2192588	.	+	.	ID=id3632;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 89.8%2C E-value 3.5e-24;gbkey=misc_feature;gene=araG;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2192361	2192405	.	+	.	ID=id3633;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=araG;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	2192867	2193775	.	+	.	ID=gene1977;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=YE2005
AM286415.1	EMBL	CDS	2192867	2193775	.	+	0	ID=cds1911;Parent=gene1977;Dbxref=EnsemblGenomes-Gn:YE2005,EnsemblGenomes-Tr:CAL12083,GOA:A1JMF2,InterPro:IPR001851,UniProtKB/TrEMBL:A1JMF2,NCBI_GP:CAL12083.1;Name=CAL12083.1;gbkey=CDS;gene=araH;product=L-arabinose transport system permease protein;protein_id=CAL12083.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2192870	2192935	.	+	.	ID=id3634;Note=10 probable transmembrane helices predicted for YE2005 by TMHMM2.0 at aa 2-23%2C 27-46%2C 53-72%2C 76-98%2C105-124%2C 144-166%2C 196-215%2C 225-243%2C 250-272 and 277-291;gbkey=misc_feature;gene=araH;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	2192945	2193004	.	+	.	ID=id3634;Note=10 probable transmembrane helices predicted for YE2005 by TMHMM2.0 at aa 2-23%2C 27-46%2C 53-72%2C 76-98%2C105-124%2C 144-166%2C 196-215%2C 225-243%2C 250-272 and 277-291;gbkey=misc_feature;gene=araH;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	2193023	2193082	.	+	.	ID=id3634;Note=10 probable transmembrane helices predicted for YE2005 by TMHMM2.0 at aa 2-23%2C 27-46%2C 53-72%2C 76-98%2C105-124%2C 144-166%2C 196-215%2C 225-243%2C 250-272 and 277-291;gbkey=misc_feature;gene=araH;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	2193092	2193160	.	+	.	ID=id3634;Note=10 probable transmembrane helices predicted for YE2005 by TMHMM2.0 at aa 2-23%2C 27-46%2C 53-72%2C 76-98%2C105-124%2C 144-166%2C 196-215%2C 225-243%2C 250-272 and 277-291;gbkey=misc_feature;gene=araH;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	2193179	2193238	.	+	.	ID=id3634;Note=10 probable transmembrane helices predicted for YE2005 by TMHMM2.0 at aa 2-23%2C 27-46%2C 53-72%2C 76-98%2C105-124%2C 144-166%2C 196-215%2C 225-243%2C 250-272 and 277-291;gbkey=misc_feature;gene=araH;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	2193296	2193364	.	+	.	ID=id3634;Note=10 probable transmembrane helices predicted for YE2005 by TMHMM2.0 at aa 2-23%2C 27-46%2C 53-72%2C 76-98%2C105-124%2C 144-166%2C 196-215%2C 225-243%2C 250-272 and 277-291;gbkey=misc_feature;gene=araH;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	2193452	2193511	.	+	.	ID=id3634;Note=10 probable transmembrane helices predicted for YE2005 by TMHMM2.0 at aa 2-23%2C 27-46%2C 53-72%2C 76-98%2C105-124%2C 144-166%2C 196-215%2C 225-243%2C 250-272 and 277-291;gbkey=misc_feature;gene=araH;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	2193539	2193595	.	+	.	ID=id3634;Note=10 probable transmembrane helices predicted for YE2005 by TMHMM2.0 at aa 2-23%2C 27-46%2C 53-72%2C 76-98%2C105-124%2C 144-166%2C 196-215%2C 225-243%2C 250-272 and 277-291;gbkey=misc_feature;gene=araH;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	2193614	2193682	.	+	.	ID=id3634;Note=10 probable transmembrane helices predicted for YE2005 by TMHMM2.0 at aa 2-23%2C 27-46%2C 53-72%2C 76-98%2C105-124%2C 144-166%2C 196-215%2C 225-243%2C 250-272 and 277-291;gbkey=misc_feature;gene=araH;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	2193695	2193739	.	+	.	ID=id3634;Note=10 probable transmembrane helices predicted for YE2005 by TMHMM2.0 at aa 2-23%2C 27-46%2C 53-72%2C 76-98%2C105-124%2C 144-166%2C 196-215%2C 225-243%2C 250-272 and 277-291;gbkey=misc_feature;gene=araH;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	2192870	2192902	.	+	.	ID=id3635;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=araH;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2192924	2193772	.	+	.	ID=id3636;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score -40.9%2C E-value 7.9e-05;gbkey=misc_feature;gene=araH;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	sequence_feature	2192954	2192986	.	+	.	ID=id3637;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=araH;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2193305	2193337	.	+	.	ID=id3638;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=araH;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2193899	2194831	.	+	.	ID=gene1978;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=YE2006
AM286415.1	EMBL	CDS	2193899	2194831	.	+	0	ID=cds1912;Parent=gene1978;Dbxref=EnsemblGenomes-Gn:YE2006,EnsemblGenomes-Tr:CAL12084,GOA:A1JMI8,InterPro:IPR003313,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR020449,UniProtKB/TrEMBL:A1JMI8,NCBI_GP:CAL12084.1;Name=CAL12084.1;gbkey=CDS;gene=araC;product=arabinose operon regulatory protein;protein_id=CAL12084.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2193932	2194414	.	+	.	ID=id3639;Note=Pfam match to entry PF02311 AraC_binding%2C Arabinose operon regulatory protein%2C score 435.3%2C E-value 3.6e-128;gbkey=misc_feature;gene=araC;inference=protein motif:PFAM:PF02311
AM286415.1	EMBL	sequence_feature	2194460	2194597	.	+	.	ID=id3640;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 43.6%2C E-value 2.9e-10;gbkey=misc_feature;gene=araC;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	2194496	2194561	.	+	.	ID=id3641;Note=Predicted helix-turn-helix motif with score 1772.000%2C SD 5.22 at aa 200-221%2C sequence LRIDEVARHVCLSPSRLAHLFR;gbkey=misc_feature;gene=araC
AM286415.1	EMBL	sequence_feature	2194604	2194732	.	+	.	ID=id3642;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=araC;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	2194616	2194747	.	+	.	ID=id3643;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 53.1%2C E-value 4e-13;gbkey=misc_feature;gene=araC;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	2194933	2195982	.	+	.	ID=gene1979;Name=YE2007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2007
AM286415.1	EMBL	CDS	2194933	2195982	.	+	0	ID=cds1913;Parent=gene1979;Dbxref=EnsemblGenomes-Gn:YE2007,EnsemblGenomes-Tr:CAL12085,GOA:A1JML5,InterPro:IPR000683,InterPro:IPR004104,InterPro:IPR016040,UniProtKB/TrEMBL:A1JML5,NCBI_GP:CAL12085.1;Name=CAL12085.1;gbkey=CDS;product=putative oxidoreductase;protein_id=CAL12085.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2194945	2195298	.	+	.	ID=id3644;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2COxidoreductase family%2C NAD-binding Rossmann fold%2C score 135.2%2C E-value 7.8e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF01408
AM286415.1	EMBL	sequence_feature	2195332	2195655	.	+	.	ID=id3645;Note=Pfam match to entry PF02894 GFO_IDH_MocA_C%2COxidoreductase family%2C C-terminal alpha/beta domain %2Cscore 74.7%2C E-value 1.2e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF02894
AM286415.1	EMBL	gene	2196154	2197167	.	+	.	ID=gene1980;Name=YE2008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2008
AM286415.1	EMBL	CDS	2196154	2197167	.	+	0	ID=cds1914;Parent=gene1980;Dbxref=EnsemblGenomes-Gn:YE2008,EnsemblGenomes-Tr:CAL12086,InterPro:IPR016833,UniProtKB/TrEMBL:A1JML0,NCBI_GP:CAL12086.1;Name=CAL12086.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12086.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2196187	2196240	.	+	.	ID=id3646;Note=9 probable transmembrane helices predicted for YE2008 by TMHMM2.0 at aa 12-29%2C 34-56%2C 69-91%2C 101-123%2C128-150%2C 165-184%2C 205-227%2C 232-254 and 275-297;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	2196253	2196321	.	+	.	ID=id3646;Note=9 probable transmembrane helices predicted for YE2008 by TMHMM2.0 at aa 12-29%2C 34-56%2C 69-91%2C 101-123%2C128-150%2C 165-184%2C 205-227%2C 232-254 and 275-297;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	2196358	2196426	.	+	.	ID=id3646;Note=9 probable transmembrane helices predicted for YE2008 by TMHMM2.0 at aa 12-29%2C 34-56%2C 69-91%2C 101-123%2C128-150%2C 165-184%2C 205-227%2C 232-254 and 275-297;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	2196454	2196522	.	+	.	ID=id3646;Note=9 probable transmembrane helices predicted for YE2008 by TMHMM2.0 at aa 12-29%2C 34-56%2C 69-91%2C 101-123%2C128-150%2C 165-184%2C 205-227%2C 232-254 and 275-297;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	2196535	2196603	.	+	.	ID=id3646;Note=9 probable transmembrane helices predicted for YE2008 by TMHMM2.0 at aa 12-29%2C 34-56%2C 69-91%2C 101-123%2C128-150%2C 165-184%2C 205-227%2C 232-254 and 275-297;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	2196646	2196705	.	+	.	ID=id3646;Note=9 probable transmembrane helices predicted for YE2008 by TMHMM2.0 at aa 12-29%2C 34-56%2C 69-91%2C 101-123%2C128-150%2C 165-184%2C 205-227%2C 232-254 and 275-297;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	2196766	2196834	.	+	.	ID=id3646;Note=9 probable transmembrane helices predicted for YE2008 by TMHMM2.0 at aa 12-29%2C 34-56%2C 69-91%2C 101-123%2C128-150%2C 165-184%2C 205-227%2C 232-254 and 275-297;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	2196847	2196915	.	+	.	ID=id3646;Note=9 probable transmembrane helices predicted for YE2008 by TMHMM2.0 at aa 12-29%2C 34-56%2C 69-91%2C 101-123%2C128-150%2C 165-184%2C 205-227%2C 232-254 and 275-297;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	2196976	2197044	.	+	.	ID=id3646;Note=9 probable transmembrane helices predicted for YE2008 by TMHMM2.0 at aa 12-29%2C 34-56%2C 69-91%2C 101-123%2C128-150%2C 165-184%2C 205-227%2C 232-254 and 275-297;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	2196805	2196834	.	+	.	ID=id3647;Note=PS00904 Protein prenyltransferases alpha subunit repeat signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00904
AM286415.1	EMBL	gene	2197329	2198327	.	-	.	ID=gene1981;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=YE2009
AM286415.1	EMBL	CDS	2197329	2198327	.	-	0	ID=cds1915;Parent=gene1981;Dbxref=EnsemblGenomes-Gn:YE2009,EnsemblGenomes-Tr:CAL12087,GOA:A1JML4,InterPro:IPR001365,InterPro:IPR006330,InterPro:IPR006650,InterPro:IPR028893,NCBI_GP:CAL12087.1;Name=CAL12087.1;Note=Similar to Escherichia coli adenosine deaminase Add or b1623 SWALL:ADD_ECOLI (SWALL:P22333) (333 aa) fasta scores: E(): 1.8e-100%2C 77.27 38d in 330 aa and to Salmonella typhi adenosine deaminase Add or Sty1658 SWALL:ADD_SALTI (SWALL:Q8Z6R2) (333 aa) fasta scores: E(): 2.3e-103%2C 79.39 38d in 330 aa;gbkey=CDS;gene=add;inference=similar to sequence:UniProtKB:Q8Z6R2;product=adenosine deaminase;protein_id=CAL12087.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2197488	2197508	.	-	.	ID=id3648;Note=PS00485 Adenosine and AMP deaminase signature.;gbkey=misc_feature;gene=add;inference=protein motif:Prosite:PS00485
AM286415.1	EMBL	sequence_feature	2197341	2198336	.	-	.	ID=id3649;Note=Pfam match to entry PF00962 A_deaminase%2CAdenosine/AMP deaminase%2C score 399.2%2C E-value 2.7e-117;gbkey=misc_feature;inference=protein motif:PFAM:PF00962
AM286415.1	EMBL	gene	2198525	2199721	.	-	.	ID=gene1982;Name=YE2010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2010
AM286415.1	EMBL	CDS	2198525	2199721	.	-	0	ID=cds1916;Parent=gene1982;Dbxref=EnsemblGenomes-Gn:YE2010,EnsemblGenomes-Tr:CAL12088,GOA:A1JMC4,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR027619,UniProtKB/TrEMBL:A1JMC4,NCBI_GP:CAL12088.1;Name=CAL12088.1;gbkey=CDS;product=putative aminotransferase;protein_id=CAL12088.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2198534	2199484	.	-	.	ID=id3650;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 129.7%2C E-value 3.5e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	gene	2199896	2201506	.	-	.	ID=gene1983;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=YE2011
AM286415.1	EMBL	CDS	2199896	2201506	.	-	0	ID=cds1917;Parent=gene1983;Dbxref=EnsemblGenomes-Gn:YE2011,EnsemblGenomes-Tr:CAL12089,GOA:A1JMC7,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR011301,InterPro:IPR013013,InterPro:IPR018113,UniProtKB/TrEMBL:A1JMC7,NCBI_GP:CAL12089.1;Name=CAL12089.1;Note=Highly similar to Escherichia coli PTS system%2Cmaltose and glucose-specific IIabc component MalX or b1621 SWALL:PTOA_ECOLI (SWALL:P19642) (530 aa) fasta scores: E(): 1.3e-168%2C 79.51 38d in 532 aa and to Bacillus subtilis PTS system%2C maltose and glucose-specific IIabc PtsG or Ptsx or crr SWALL:PTGA_BACSU (SWALL:P20166) (699 aa) fasta scores: E(): 1.2e-67%2C 39.04 38d in 525 aa;gbkey=CDS;gene=malX;inference=similar to sequence:UniProtKB:P20166;product=PTS system%2C maltose and glucose-specific IIabc component;protein_id=CAL12089.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2200040	2200144	.	-	.	ID=id3651;Note=Pfam match to entry PF00367 PTS_EIIB%2Cphosphotransferase system%2C EIIB%2C score 71.3%2C E-value 1.3e-18;gbkey=misc_feature;gene=malX;inference=protein motif:PFAM:PF00367
AM286415.1	EMBL	sequence_feature	2200055	2200108	.	-	.	ID=id3652;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;gene=malX;inference=protein motif:Prosite:PS01035
AM286415.1	EMBL	sequence_feature	2201378	2201446	.	-	.	ID=id3653;Note=8 probable transmembrane helices predicted for YE2011 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-119%2C 139-161%2C182-204%2C 325-347%2C 352-374 and 397-419;gbkey=misc_feature;gene=malX;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	2201252	2201320	.	-	.	ID=id3653;Note=8 probable transmembrane helices predicted for YE2011 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-119%2C 139-161%2C182-204%2C 325-347%2C 352-374 and 397-419;gbkey=misc_feature;gene=malX;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	2201150	2201218	.	-	.	ID=id3653;Note=8 probable transmembrane helices predicted for YE2011 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-119%2C 139-161%2C182-204%2C 325-347%2C 352-374 and 397-419;gbkey=misc_feature;gene=malX;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	2201024	2201092	.	-	.	ID=id3653;Note=8 probable transmembrane helices predicted for YE2011 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-119%2C 139-161%2C182-204%2C 325-347%2C 352-374 and 397-419;gbkey=misc_feature;gene=malX;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	2200895	2200963	.	-	.	ID=id3653;Note=8 probable transmembrane helices predicted for YE2011 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-119%2C 139-161%2C182-204%2C 325-347%2C 352-374 and 397-419;gbkey=misc_feature;gene=malX;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	2200466	2200534	.	-	.	ID=id3653;Note=8 probable transmembrane helices predicted for YE2011 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-119%2C 139-161%2C182-204%2C 325-347%2C 352-374 and 397-419;gbkey=misc_feature;gene=malX;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	2200385	2200453	.	-	.	ID=id3653;Note=8 probable transmembrane helices predicted for YE2011 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-119%2C 139-161%2C182-204%2C 325-347%2C 352-374 and 397-419;gbkey=misc_feature;gene=malX;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	2200250	2200318	.	-	.	ID=id3653;Note=8 probable transmembrane helices predicted for YE2011 by TMHMM2.0 at aa 21-43%2C 63-85%2C 97-119%2C 139-161%2C182-204%2C 325-347%2C 352-374 and 397-419;gbkey=misc_feature;gene=malX;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	2200424	2201452	.	-	.	ID=id3654;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 488.8%2C E-value 2.8e-144;gbkey=misc_feature;gene=malX;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	gene	2201822	2202853	.	+	.	ID=gene1984;Name=malI;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=YE2012
AM286415.1	EMBL	CDS	2201822	2202853	.	+	0	ID=cds1918;Parent=gene1984;Dbxref=EnsemblGenomes-Gn:YE2012,EnsemblGenomes-Tr:CAL12090,GOA:A1JMF4,InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JMF4,NCBI_GP:CAL12090.1;Name=CAL12090.1;Note=Similar to Escherichia coli maltose regulon regulatory protein MalI or b1620 SWALL:MALI_ECOLI (SWALL:P18811) (342 aa) fasta scores: E(): 1.1e-68%2C 55.19 id in 337 aa and to Thermomonospora fusca transcription regulator CelR SWALL:CELR_THEFU (SWALL:O87590) (340 aa) fasta scores: E(): 2.2e-21%2C 30.83 38d in 347 aa;gbkey=CDS;gene=malI;inference=similar to sequence:UniProtKB:P18811;product=maltose regulon regulatory protein;protein_id=CAL12090.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2201831	2201914	.	+	.	ID=id3655;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 42.2%2C E-value 7.6e-10;gbkey=misc_feature;gene=malI;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	2201837	2201902	.	+	.	ID=id3656;Note=Predicted helix-turn-helix motif with score 1724.000%2C SD 5.06 at aa 6-27%2C sequence TTITDVAKFAGVSVATVSLAIS;gbkey=misc_feature;gene=malI
AM286415.1	EMBL	sequence_feature	2201843	2201899	.	+	.	ID=id3657;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=malI;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	sequence_feature	2202008	2202844	.	+	.	ID=id3658;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 186.8%2C E-value 2.2e-53;gbkey=misc_feature;gene=malI;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	2203043	2203402	.	-	.	ID=gene1985;Name=YE2013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2013
AM286415.1	EMBL	CDS	2203043	2203402	.	-	0	ID=cds1919;Parent=gene1985;Dbxref=EnsemblGenomes-Gn:YE2013,EnsemblGenomes-Tr:CAL12091,UniProtKB/TrEMBL:A1JMG5,NCBI_GP:CAL12091.1;Name=CAL12091.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12091.1;transl_table=11
AM286415.1	EMBL	gene	2203551	2205125	.	-	.	ID=gene1986;Name=YE2014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2014
AM286415.1	EMBL	CDS	2203551	2205125	.	-	0	ID=cds1920;Parent=gene1986;Dbxref=EnsemblGenomes-Gn:YE2014,EnsemblGenomes-Tr:CAL12092,InterPro:IPR010352,UniProtKB/TrEMBL:A1JMH2,NCBI_GP:CAL12092.1;Name=CAL12092.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12092.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2205054	2205113	.	-	.	ID=id3659;Note=1 probable transmembrane helix predicted for YE2014 by TMHMM2.0 at aa 5-24;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2205357	2206532	.	-	.	ID=gene1987;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;gene_synonym=pmi;locus_tag=YE2015
AM286415.1	EMBL	CDS	2205357	2206532	.	-	0	ID=cds1921;Parent=gene1987;Dbxref=EnsemblGenomes-Gn:YE2015,EnsemblGenomes-Tr:CAL12093,GOA:A1JMH5,InterPro:IPR001250,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR016305,InterPro:IPR018050,UniProtKB/TrEMBL:A1JMH5,NCBI_GP:CAL12093.1;Name=CAL12093.1;gbkey=CDS;gene=manA;product=mannose-6-phosphate isomerase;protein_id=CAL12093.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2205462	2206532	.	-	.	ID=id3660;Note=Pfam match to entry PF01238 PMI_typeI%2CPhosphomannose isomerase type I%2C score 540.1%2C E-value 1e-159;gbkey=misc_feature;gene=manA;inference=protein motif:PFAM:PF01238
AM286415.1	EMBL	sequence_feature	2205693	2205770	.	-	.	ID=id3661;Note=PS00966 Phosphomannose isomerase type I signature 2.;gbkey=misc_feature;gene=manA;inference=protein motif:Prosite:PS00966
AM286415.1	EMBL	sequence_feature	2206131	2206157	.	-	.	ID=id3662;Note=PS00965 Phosphomannose isomerase type I signature 1.;gbkey=misc_feature;gene=manA;inference=protein motif:Prosite:PS00965
AM286415.1	EMBL	gene	2206758	2208152	.	+	.	ID=gene1988;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=YE2016
AM286415.1	EMBL	CDS	2206758	2208152	.	+	0	ID=cds1922;Parent=gene1988;Dbxref=EnsemblGenomes-Gn:YE2016,EnsemblGenomes-Tr:CAL12094,GOA:A1JMJ2,InterPro:IPR000362,InterPro:IPR005677,InterPro:IPR008948,InterPro:IPR018951,InterPro:IPR020557,InterPro:IPR022761,InterPro:IPR024083,UniProtKB/TrEMBL:A1JMJ2,NCBI_GP:CAL12094.1;Name=CAL12094.1;gbkey=CDS;gene=fumC;product=fumarate hydratase%2C class II;protein_id=CAL12094.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2206791	2208128	.	+	.	ID=id3663;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 747.9%2C E-value 2.9e-222;gbkey=misc_feature;gene=fumC;inference=protein motif:PFAM:PF00206
AM286415.1	EMBL	sequence_feature	2207706	2207735	.	+	.	ID=id3664;Note=PS00163 Fumarate lyases signature.;gbkey=misc_feature;gene=fumC;inference=protein motif:Prosite:PS00163
AM286415.1	EMBL	gene	2208458	2209177	.	+	.	ID=gene1989;Name=YE2017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2017
AM286415.1	EMBL	CDS	2208458	2209177	.	+	0	ID=cds1923;Parent=gene1989;Dbxref=EnsemblGenomes-Gn:YE2017,EnsemblGenomes-Tr:CAL12095,GOA:A1JMK6,InterPro:IPR000014,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR013656,InterPro:IPR016032,UniProtKB/TrEMBL:A1JMK6,NCBI_GP:CAL12095.1;Name=CAL12095.1;Note=Weakly similar to other LuxR-family transcriptional regulators including: Vibrio cholerae Vca1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 2.5e-08%2C24.88 38d in 221 aa and Pseudomonas aeruginosa probable transcriptional regulatorPa1347 SWALL:Q9I3Z7 (EMBL:AE004564) (230 aa) fasta scores: E(): 3.4e-06%2C25.98 38d in 204 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004564;product=putative LuxR-family transcriptional regulatory protein;protein_id=CAL12095.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2208935	2209132	.	+	.	ID=id3665;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 48.1%2C E-value 1.2e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	2208989	2209054	.	+	.	ID=id3666;Note=Predicted helix-turn-helix motif with score 1590.000%2C SD 4.60 at aa 178-199%2C sequence MTAKEIAEKLFLSNRTIENRLR;gbkey=misc_feature
AM286415.1	EMBL	gene	2209263	2210192	.	-	.	ID=gene1990;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;gene_synonym=tau;locus_tag=YE2018
AM286415.1	EMBL	CDS	2209263	2210192	.	-	0	ID=cds1924;Parent=gene1990;Dbxref=EnsemblGenomes-Gn:YE2018,EnsemblGenomes-Tr:CAL12096,GOA:A1JML7,InterPro:IPR008865,NCBI_GP:CAL12096.1;Name=CAL12096.1;gbkey=CDS;gene=tus;product=DNA replication terminus site-binding protein;protein_id=CAL12096.1;transl_table=11
AM286415.1	EMBL	gene	2210344	2211228	.	-	.	ID=gene1991;Name=blaA;gbkey=Gene;gene=blaA;gene_biotype=protein_coding;locus_tag=YE2019
AM286415.1	EMBL	CDS	2210344	2211228	.	-	0	ID=cds1925;Parent=gene1991;Dbxref=EnsemblGenomes-Gn:YE2019,EnsemblGenomes-Tr:CAL12097,GOA:A1JML9,InterPro:IPR000871,InterPro:IPR012338,InterPro:IPR023650,UniProtKB/TrEMBL:A1JML9,NCBI_GP:CAL12097.1;Name=CAL12097.1;Note=Previously sequenced as Yersinia enterocolitica beta-lactamase precursor BlaA SWALL:BLAC_YEREN (SWALL:Q01166) (294 aa) fasta scores: E(): 1.2e-107%2C93.87 38d in 294 aa. Also highly similar to Burkholderia pseudomallei beta-lactamase 1c bla-bps-1C SWALL:Q8VVD0 (EMBL:AF441238) (295 aa) fasta scores: E(): 2.6e-62%2C58.47 38d in 289 aa;gbkey=CDS;gene=blaA;inference=similar to sequence:UniProtKB:Q01166;product=beta-lactamase precursor;protein_id=CAL12097.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2210347	2211123	.	-	.	ID=id3667;Note=Pfam match to entry PF00144 beta-lactamase%2CBeta-lactamase%2C score 461.7%2C E-value 3.9e-136;gbkey=misc_feature;gene=blaA;inference=protein motif:PFAM:PF00144
AM286415.1	EMBL	sequence_feature	2210971	2211018	.	-	.	ID=id3668;Note=PS00146 Beta-lactamase class-A active site.;gbkey=misc_feature;gene=blaA;inference=protein motif:Prosite:PS00146
AM286415.1	EMBL	sequence_feature	2211136	2211204	.	-	.	ID=id3669;Note=1 probable transmembrane helix predicted for YE2019 by TMHMM2.0 at aa 26-48;gbkey=misc_feature;gene=blaA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	signal_peptide	2211145	2211279	.	-	.	ID=id3670;Note=Signal peptide predicted for YE2019 by SignalP 2.0 HMM (Signal peptide probabilty 0.750) with cleavage site probability 0.740 between residues 45 and 46;gbkey=sig_peptide
AM286415.1	EMBL	gene	2211427	2211816	.	-	.	ID=gene1992;Name=YE2020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2020
AM286415.1	EMBL	CDS	2211427	2211816	.	-	0	ID=cds1926;Parent=gene1992;Dbxref=EnsemblGenomes-Gn:YE2020,EnsemblGenomes-Tr:CAL12098,InterPro:IPR018649,InterPro:IPR027379,UniProtKB/TrEMBL:A1JMM5,NCBI_GP:CAL12098.1;Name=CAL12098.1;Note=Weakly similar to Streptomyces coelicolor putative integral membrane protein Sco6327 or sc10h5.03C SWALL:O86495 (EMBL:AL031232) (154 aa) fasta scores: E(): 1.8e-10%2C 36.44 38d in 118 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL031232;product=putative membrane protein;protein_id=CAL12098.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2211736	2211804	.	-	.	ID=id3671;Note=2 probable transmembrane helices predicted for YE2020 by TMHMM2.0 at aa 5-27 and 47-66;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2211619	2211678	.	-	.	ID=id3671;Note=2 probable transmembrane helices predicted for YE2020 by TMHMM2.0 at aa 5-27 and 47-66;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2212003	2213295	.	-	.	ID=gene1993;Name=YE2021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2021
AM286415.1	EMBL	CDS	2212003	2213295	.	-	0	ID=cds1927;Parent=gene1993;Dbxref=EnsemblGenomes-Gn:YE2021,EnsemblGenomes-Tr:CAL12099,GOA:A1JMN0,InterPro:IPR005829,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JMN0,NCBI_GP:CAL12099.1;Name=CAL12099.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12099.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2212012	2213169	.	-	.	ID=id3672;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -58.3%2C E-value 8.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	2213089	2213157	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2212981	2213046	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2212894	2212962	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2212816	2212884	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2212729	2212797	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2212633	2212701	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2212480	2212548	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2212393	2212452	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2212288	2212356	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2212210	2212278	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2212108	2212176	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2212042	2212098	.	-	.	ID=id3673;Note=12 probable transmembrane helices predicted for YE2021 by TMHMM2.0 at aa 47-69%2C 84-105%2C 112-134%2C 138-160%2C167-189%2C 199-221%2C 250-272%2C 282-301%2C 314-336%2C 340-362%2C374-396 and 400-418;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2212651	2212683	.	-	.	ID=id3674;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2212945	2212995	.	-	.	ID=id3675;Note=PS00216 Sugar transport proteins signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00216
AM286415.1	EMBL	gene	2213472	2214383	.	+	.	ID=gene1994;Name=YE2022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2022
AM286415.1	EMBL	CDS	2213472	2214383	.	+	0	ID=cds1928;Parent=gene1994;Dbxref=EnsemblGenomes-Gn:YE2022,EnsemblGenomes-Tr:CAL12100,GOA:A1JMN3,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JMN3,NCBI_GP:CAL12100.1;Name=CAL12100.1;gbkey=CDS;product=probable LysR-family transcriptional regulator;protein_id=CAL12100.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2213484	2213663	.	+	.	ID=id3676;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 109.8%2C E-value 3.4e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2213523	2213588	.	+	.	ID=id3677;Note=Predicted helix-turn-helix motif with score 1413.000%2C SD 4.00 at aa 18-39%2C sequence LHFGRAAERLRISQPPLSQQIR;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	2213526	2213618	.	+	.	ID=id3678;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	2213733	2214368	.	+	.	ID=id3679;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 167.5%2C E-value 1.5e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	2214604	2215821	.	+	.	ID=gene1995;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;locus_tag=YE2023
AM286415.1	EMBL	CDS	2214604	2215821	.	+	0	ID=cds1929;Parent=gene1995;Dbxref=EnsemblGenomes-Gn:YE2023,EnsemblGenomes-Tr:CAL12101,InterPro:IPR000600,InterPro:IPR011991,UniProtKB/TrEMBL:A1JMP0,NCBI_GP:CAL12101.1;Name=CAL12101.1;gbkey=CDS;gene=mlc;product=putative ROK family transcriptional regulatory protein;protein_id=CAL12101.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2214694	2214759	.	+	.	ID=id3680;Note=Predicted helix-turn-helix motif with score 1041.000%2C SD 2.73 at aa 31-52%2C sequence ISRIELSKRAQLAPASITKIVR;gbkey=misc_feature;gene=mlc
AM286415.1	EMBL	sequence_feature	2214868	2215422	.	+	.	ID=id3681;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 97.7%2C E-value 1.5e-26;gbkey=misc_feature;gene=mlc;inference=protein motif:PFAM:PF00480
AM286415.1	EMBL	sequence_feature	2215642	2215674	.	+	.	ID=id3682;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=mlc;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2216044	2216712	.	+	.	ID=gene1996;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=YE2024
AM286415.1	EMBL	CDS	2216044	2216712	.	+	0	ID=cds1930;Parent=gene1996;Dbxref=EnsemblGenomes-Gn:YE2024,EnsemblGenomes-Tr:CAL12102,GOA:A1JMP5,InterPro:IPR004472,InterPro:IPR027417,UniProtKB/TrEMBL:A1JMP5,NCBI_GP:CAL12102.1;Name=CAL12102.1;gbkey=CDS;gene=bioD;product=putative dethiobiotin synthetase;protein_id=CAL12102.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2216053	2216667	.	+	.	ID=id3683;Note=Pfam match to entry PF01656 CbiA%2C Cobyrinic acid a%2Cc-diamide synthase%2C score 143.5%2C E-value 2.5e-40;gbkey=misc_feature;gene=bioD;inference=protein motif:PFAM:PF01656
AM286415.1	EMBL	gene	2216733	2218013	.	-	.	ID=gene1997;Name=YE2025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2025
AM286415.1	EMBL	CDS	2216733	2218013	.	-	0	ID=cds1931;Parent=gene1997;Dbxref=EnsemblGenomes-Gn:YE2025,EnsemblGenomes-Tr:CAL12103,GOA:A1JMP9,InterPro:IPR001807,InterPro:IPR014743,InterPro:IPR023790,UniProtKB/TrEMBL:A1JMP9,NCBI_GP:CAL12103.1;Name=CAL12103.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12103.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2216760	2217812	.	-	.	ID=id3684;Note=Pfam match to entry PF00654 voltage_CLC%2C Voltage gated chloride channel%2C score 103.1%2C E-value 3.4e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00654
AM286415.1	EMBL	sequence_feature	2217912	2217980	.	-	.	ID=id3685;Note=10 probable transmembrane helices predicted for YE2025 by TMHMM2.0 at aa 12-34%2C 66-83%2C 159-177%2C 187-209%2C230-252%2C 272-294%2C 307-324%2C 334-356%2C 363-385 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	2217765	2217818	.	-	.	ID=id3685;Note=10 probable transmembrane helices predicted for YE2025 by TMHMM2.0 at aa 12-34%2C 66-83%2C 159-177%2C 187-209%2C230-252%2C 272-294%2C 307-324%2C 334-356%2C 363-385 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	2217483	2217539	.	-	.	ID=id3685;Note=10 probable transmembrane helices predicted for YE2025 by TMHMM2.0 at aa 12-34%2C 66-83%2C 159-177%2C 187-209%2C230-252%2C 272-294%2C 307-324%2C 334-356%2C 363-385 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	2217387	2217455	.	-	.	ID=id3685;Note=10 probable transmembrane helices predicted for YE2025 by TMHMM2.0 at aa 12-34%2C 66-83%2C 159-177%2C 187-209%2C230-252%2C 272-294%2C 307-324%2C 334-356%2C 363-385 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	2217258	2217326	.	-	.	ID=id3685;Note=10 probable transmembrane helices predicted for YE2025 by TMHMM2.0 at aa 12-34%2C 66-83%2C 159-177%2C 187-209%2C230-252%2C 272-294%2C 307-324%2C 334-356%2C 363-385 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	2217132	2217200	.	-	.	ID=id3685;Note=10 probable transmembrane helices predicted for YE2025 by TMHMM2.0 at aa 12-34%2C 66-83%2C 159-177%2C 187-209%2C230-252%2C 272-294%2C 307-324%2C 334-356%2C 363-385 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	2217042	2217095	.	-	.	ID=id3685;Note=10 probable transmembrane helices predicted for YE2025 by TMHMM2.0 at aa 12-34%2C 66-83%2C 159-177%2C 187-209%2C230-252%2C 272-294%2C 307-324%2C 334-356%2C 363-385 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	2216946	2217014	.	-	.	ID=id3685;Note=10 probable transmembrane helices predicted for YE2025 by TMHMM2.0 at aa 12-34%2C 66-83%2C 159-177%2C 187-209%2C230-252%2C 272-294%2C 307-324%2C 334-356%2C 363-385 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	2216859	2216927	.	-	.	ID=id3685;Note=10 probable transmembrane helices predicted for YE2025 by TMHMM2.0 at aa 12-34%2C 66-83%2C 159-177%2C 187-209%2C230-252%2C 272-294%2C 307-324%2C 334-356%2C 363-385 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	2216763	2216831	.	-	.	ID=id3685;Note=10 probable transmembrane helices predicted for YE2025 by TMHMM2.0 at aa 12-34%2C 66-83%2C 159-177%2C 187-209%2C230-252%2C 272-294%2C 307-324%2C 334-356%2C 363-385 and 395-417;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	2216793	2216825	.	-	.	ID=id3686;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2218087	2218335	.	-	.	ID=gene1998;Name=YE2025A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2025A
AM286415.1	EMBL	CDS	2218087	2218335	.	-	0	ID=cds1932;Parent=gene1998;Dbxref=EnsemblGenomes-Gn:YE2025A,EnsemblGenomes-Tr:CCP19178,InterPro:IPR010595,UniProtKB/TrEMBL:K8FK40,NCBI_GP:CCP19178.1;Name=CCP19178.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CCP19178.1;transl_table=11
AM286415.1	EMBL	gene	2218424	2218795	.	-	.	ID=gene1999;Name=YE2026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2026
AM286415.1	EMBL	CDS	2218424	2218795	.	-	0	ID=cds1933;Parent=gene1999;Dbxref=EnsemblGenomes-Gn:YE2026,EnsemblGenomes-Tr:CAL12104,InterPro:IPR009700,NCBI_GP:CAL12104.1;Name=CAL12104.1;Note=Highly similar to Yersinia pseudotuberculosis hypothetical 14.2 kDa protein SWALL:Q93AP0 (EMBL:AF418982) (124 aa) fasta scores: E(): 7.5e-41%2C 82.11 38d in 123 aa and to Escherichia coli hypothetical protein YnfB or b1583 SWALL:YNFB_ECOLI (SWALL:P76170) (113 aa) fasta scores: E(): 2.5e-14%2C 43.96 38d in 116 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76170;product=putative exported protein;protein_id=CAL12104.1;transl_table=11
AM286415.1	EMBL	pseudogene	2218992	2219167	.	+	.	ID=gene2000;Name=YE2026A;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE2026A;pseudo=true
AM286415.1	EMBL	CDS	2218992	2219150	.	+	0	ID=cds1934;Parent=gene2000;Note=only N terminus present%2C frameshift;gbkey=CDS;product=conserved hypothetical exported protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2219147	2219167	.	+	0	ID=cds1934;Parent=gene2000;Note=only N terminus present%2C frameshift;gbkey=CDS;product=conserved hypothetical exported protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	2219164	2219490	.	+	.	ID=gene2001;Name=YE2027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2027
AM286415.1	EMBL	CDS	2219164	2219490	.	+	0	ID=cds1935;Parent=gene2001;Dbxref=EnsemblGenomes-Gn:YE2027,EnsemblGenomes-Tr:CAL12105,GOA:A1JMQ7,InterPro:IPR003844,NCBI_GP:CAL12105.1;Name=CAL12105.1;Note=Similar to many including: Salmonella typhi hypothetical protein YnfA or sty1558 SWALL:Q8Z6Z2 (EMBL:AL627270) (108 aa) fasta scores: E(): 3.2e-33%2C 80 id in 105 aa%2C Escherichia coli hypothetical protein YnfA or b1582 SWALL:YNFA_ECOLI (SWALL:P76169) (108 aa) fasta scores: E(): 4.3e-33%2C 80 38d in 105 aa and to Escherichia coli%2C and Klebsiella aerogenes quaternary ammonium compound-resistance protein QacE SWALL:QACE_ECOLI (SWALL:Q57225) (110 aa) fasta scores: E(): 9.1%2C 26.47 38d in 102 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q57225;product=putative exported protein;protein_id=CAL12105.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2219164	2219484	.	+	.	ID=id3687;Note=Pfam match to entry PF02694 UPF0060%2CUncharacterized BCR%2C YnfA/UPF0060 family%2C score 207.9%2CE-value 1e-59;gbkey=misc_feature;inference=protein motif:PFAM:PF02694
AM286415.1	EMBL	sequence_feature	2219260	2219328	.	+	.	ID=id3688;Note=3 probable transmembrane helices predicted for YE2027 by TMHMM2.0 at aa 33-55%2C 59-78 and 85-107;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2219338	2219397	.	+	.	ID=id3688;Note=3 probable transmembrane helices predicted for YE2027 by TMHMM2.0 at aa 33-55%2C 59-78 and 85-107;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2219416	2219484	.	+	.	ID=id3688;Note=3 probable transmembrane helices predicted for YE2027 by TMHMM2.0 at aa 33-55%2C 59-78 and 85-107;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	2219521	2220276	.	-	.	ID=gene2002;Name=YE2028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2028
AM286415.1	EMBL	CDS	2219521	2220276	.	-	0	ID=cds1936;Parent=gene2002;Dbxref=EnsemblGenomes-Gn:YE2028,EnsemblGenomes-Tr:CAL12106,GOA:A1JMR0,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,UniProtKB/TrEMBL:A1JMR0,NCBI_GP:CAL12106.1;Name=CAL12106.1;Note=Similar to many including: Yersinia pseudotuberculosis putative oxidoreductase SWALL:Q9AGD6 (EMBL:AF335466) (249 aa) fasta scores: E(): 7.2e-86%2C 91.9 id in 247 aa and to Escherichia coli probable oxidoreductase YdfG or b1539 SWALL:YDFG_ECOLI (SWALL:P39831) (248 aa) fasta scores: E(): 3.4e-70%2C 75.8 id in 248 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P39831;product=putative oxidoreductase;protein_id=CAL12106.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2219551	2220276	.	-	.	ID=id3689;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 244.3%2C E-value 1.1e-70;gbkey=misc_feature;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	sequence_feature	2219785	2219871	.	-	.	ID=id3690;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	gene	2220356	2221831	.	-	.	ID=gene2003;Name=YE2029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2029
AM286415.1	EMBL	CDS	2220356	2221831	.	-	0	ID=cds1937;Parent=gene2003;Dbxref=EnsemblGenomes-Gn:YE2029,EnsemblGenomes-Tr:CAL12107,GOA:A1JMR3,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JMR3,NCBI_GP:CAL12107.1;Name=CAL12107.1;Note=Similar to many membrane transport proteins including: Rhizobium meliloti putative transport transmembrane protein R02571 or Smc02343 SWALL:Q92MP2 (EMBL:AL591791) (479 aa) fasta scores: E(): 3.1e-73%2C41.94 38d in 484 aa and to Brucella melitensis methylenomycin A resistance protein Bmeii0596 SWALL:Q8YCD6 (EMBL:AE009695) (469 aa) fasta scores: E(): 1.4e-68%2C39.13 38d in 460 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591791;product=putative membrane transport protein;protein_id=CAL12107.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2221673	2221741	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	2221562	2221630	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	2221475	2221543	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	2221397	2221465	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	2221292	2221360	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	2221214	2221282	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	2221124	2221177	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	2221037	2221096	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	2220935	2221003	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	2220839	2220907	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	2220725	2220778	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	2220629	2220697	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	2220500	2220568	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	2220404	2220472	.	-	.	ID=id3691;Note=14 probable transmembrane helices predicted for YE2029 by TMHMM2.0 at aa 31-53%2C 68-90%2C 97-119%2C 123-145%2C158-180%2C 184-206%2C 219-236%2C 246-265%2C 277-299%2C 309-331%2C352-369%2C 379-401%2C 422-444 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	sequence_feature	2221436	2221573	.	-	.	ID=id3692;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 19.7%2C E-value 4e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	2222032	2222310	.	-	.	ID=gene2004;Name=YE2030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2030
AM286415.1	EMBL	CDS	2222032	2222310	.	-	0	ID=cds1938;Parent=gene2004;Dbxref=EnsemblGenomes-Gn:YE2030,EnsemblGenomes-Tr:CAL12108,InterPro:IPR010854,InterPro:IPR025543,UniProtKB/TrEMBL:A1JMS2,NCBI_GP:CAL12108.1;Name=CAL12108.1;Note=Similar to Escherichia coli hypothetical protein YahO precursor or b0329 SWALL:YAHO_ECOLI (SWALL:P75694) (91 aa) fasta scores: E(): 8.4e-13%2C 53.26 38d in 92 aa and to Yersinia pestis putative exported protein Ypo0130 SWALL:Q8ZJH7 (EMBL:AJ414141) (89 aa) fasta scores: E(): 1.2e-08%2C 47.25 38d in 91 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75694;product=putative exported protein;protein_id=CAL12108.1;transl_table=11
AM286415.1	EMBL	gene	2222976	2223332	.	-	.	ID=gene2005;Name=YE2032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2032
AM286415.1	EMBL	CDS	2222976	2223332	.	-	0	ID=cds1939;Parent=gene2005;Dbxref=EnsemblGenomes-Gn:YE2032,EnsemblGenomes-Tr:CAL12109,InterPro:IPR003812,InterPro:IPR006440,UniProtKB/TrEMBL:A1JMS6,NCBI_GP:CAL12109.1;Name=CAL12109.1;Note=Similar to Bacteriophage P1 death on curing protein Doc SWALL:DOC_BPP1 (SWALL:Q06259) (126 aa) fasta scores: E(): 3e-11%2C 40.51 38d in 116 aa and to Salmonella typhimurium Stm3558 SWALL:Q8ZLF1 (EMBL:AE008864) (122 aa) fasta scores: E(): 1.4e-13%2C 44.44 38d in 117 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q06259;product=Phage/plasmid maintenance toxin/antidote system protein (toxin);protein_id=CAL12109.1;transl_table=11
AM286415.1	EMBL	gene	2223329	2223547	.	-	.	ID=gene2006;Name=YE2033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2033
AM286415.1	EMBL	CDS	2223329	2223547	.	-	0	ID=cds1940;Parent=gene2006;Dbxref=EnsemblGenomes-Gn:YE2033,EnsemblGenomes-Tr:CAL12110,InterPro:IPR006442,UniProtKB/TrEMBL:A1JMS7,NCBI_GP:CAL12110.1;Name=CAL12110.1;Note=Similar to Bacteriophage P1 prevent host death protein Phd SWALL:PHD_BPP1 (SWALL:Q06253) (73 aa) fasta scores: E(): 0.007%2C 47.27 38d in 55 aa and to Salmonella typhimurium hypothetical protein Stm3559 SWALL:YHHV_SALTY (SWALL:P40819) (75 aa) fasta scores: E(): 0.0012%2C 38.35 id in 73 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q06253;product=Phage/plasmid maintenance toxin/antidote system protein (antidote);protein_id=CAL12110.1;transl_table=11
AM286415.1	EMBL	gene	2224042	2224752	.	+	.	ID=gene2007;Name=YE2034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2034
AM286415.1	EMBL	CDS	2224042	2224752	.	+	0	ID=cds1941;Parent=gene2007;Dbxref=EnsemblGenomes-Gn:YE2034,EnsemblGenomes-Tr:CAL12111,GOA:A1JMS9,InterPro:IPR000014,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR013656,InterPro:IPR016032,UniProtKB/TrEMBL:A1JMS9,NCBI_GP:CAL12111.1;Name=CAL12111.1;Note=Weakly similar to Pseudomonas aeruginosa probable transcriptional regulator Pa1347 SWALL:Q9I3Z7 (EMBL:AE004564) (230 aa) fasta scores: E(): 6.2e-09%2C24.88 38d in 209 aa and to Vibrio cholerae transcriptional regulator%2C LuxR family Vca1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 3.7e-06%2C21.87 38d in 224 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004564;product=putative LuxR-family transcriptional regulatory protein;protein_id=CAL12111.1;transl_table=11
AM286415.1	EMBL	gene	2224870	2226117	.	-	.	ID=gene2008;Name=YE2035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2035
AM286415.1	EMBL	CDS	2224870	2226117	.	-	0	ID=cds1942;Parent=gene2008;Dbxref=EnsemblGenomes-Gn:YE2035,EnsemblGenomes-Tr:CAL12112,GOA:A1JMT0,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JMT0,NCBI_GP:CAL12112.1;Name=CAL12112.1;Note=Similar to many putative mebrane proteins Streptomyces coelicolor putative integral membrane efflux protein Sco6805 or Sc1a2.14 SWALL:Q9L227 (EMBL:AL138598) (434 aa) fasta scores: E(): 6.1e-33%2C 32.56 38d in 390 aa and to Mycobacterium smegmatis tetracycline-resistance determinant TetV SWALL:O31137 (EMBL:AF030344) (419 aa) fasta scores: E(): 1.1e-23%2C 27.27 38d in 396 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL138598;product=putative membrane transport protein;protein_id=CAL12112.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2224885	2226060	.	-	.	ID=id3693;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -104.5%2C E-value 0.00036;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	2225986	2226054	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2225890	2225958	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2225809	2225871	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2225713	2225781	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2225611	2225679	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2225533	2225601	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2225377	2225445	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2225272	2225340	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2225185	2225253	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2225107	2225175	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2225011	2225070	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2224915	2224983	.	-	.	ID=id3694;Note=12 probable transmembrane helices predicted for YE2035 by TMHMM2.0 at aa 22-44%2C 54-76%2C 83-103%2C 113-135%2C147-169%2C 173-195%2C 225-247%2C 260-282%2C 289-311%2C 315-337%2C350-369 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	2226606	2227778	.	+	.	ID=gene2009;Name=YE2036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2036
AM286415.1	EMBL	CDS	2226606	2227778	.	+	0	ID=cds1943;Parent=gene2009;Dbxref=EnsemblGenomes-Gn:YE2036,EnsemblGenomes-Tr:CAL12113,InterPro:IPR001623,UniProtKB/TrEMBL:A1JMT2,NCBI_GP:CAL12113.1;Name=CAL12113.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12113.1;transl_table=11
AM286415.1	EMBL	gene	2227833	2229179	.	-	.	ID=gene2010;Name=YE2037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2037
AM286415.1	EMBL	CDS	2227833	2229179	.	-	0	ID=cds1944;Parent=gene2010;Dbxref=EnsemblGenomes-Gn:YE2037,EnsemblGenomes-Tr:CAL12114,InterPro:IPR027372,UniProtKB/TrEMBL:A1JMT5,NCBI_GP:CAL12114.1;Name=CAL12114.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12114.1;transl_table=11
AM286415.1	EMBL	gene	2229341	2230192	.	+	.	ID=gene2011;Name=yghU;gbkey=Gene;gene=yghU;gene_biotype=protein_coding;locus_tag=YE2038
AM286415.1	EMBL	CDS	2229341	2230192	.	+	0	ID=cds1945;Parent=gene2011;Dbxref=EnsemblGenomes-Gn:YE2038,EnsemblGenomes-Tr:CAL12115,GOA:A1JMT6,InterPro:IPR004045,InterPro:IPR010987,InterPro:IPR012336,UniProtKB/TrEMBL:A1JMT6,NCBI_GP:CAL12115.1;Name=CAL12115.1;gbkey=CDS;gene=yghU;product=putative glutathione S-transferase;protein_id=CAL12115.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2229464	2229721	.	+	.	ID=id3695;Note=Pfam match to entry PF02798 GST_N%2C Glutathione S-transferase%2C N-terminal domain%2C score 36.9%2C E-value 3e-08;gbkey=misc_feature;gene=yghU;inference=protein motif:PFAM:PF02798
AM286415.1	EMBL	sequence_feature	2229890	2230090	.	+	.	ID=id3696;Note=Pfam match to entry PF00043 GST_C%2C Glutathione S-transferase%2C C-terminal domain%2C score 25.1%2C E-value 5.7e-07;gbkey=misc_feature;gene=yghU;inference=protein motif:PFAM:PF00043
AM286415.1	EMBL	gene	2230375	2231484	.	-	.	ID=gene2012;Name=YE2039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2039
AM286415.1	EMBL	CDS	2230375	2231484	.	-	0	ID=cds1946;Parent=gene2012;Dbxref=EnsemblGenomes-Gn:YE2039,EnsemblGenomes-Tr:CAL12116,GOA:A1JMT9,InterPro:IPR007036,UniProtKB/TrEMBL:A1JMT9,NCBI_GP:CAL12116.1;Name=CAL12116.1;Note=Similar to several proteins of undefined function which lie within arginine/ornithine transport operons%2Cincluding: Pseudomonas aeruginosa arginine/ornithine transport operon protein Aot or AotO or Pa0891 SWALL:O50184 (EMBL:AF012537) (370 aa) fasta scores: E(): 1.5e-51%2C 41.41 38d in 367 aa and Brucella melitensis arginine/ornithine transport operon protein Aot or Bmei1635 SWALL:Q8YF87 (EMBL:AE009599) (353 aa) fasta scores: E(): 1.1e-07%2C 32.1 38d in 352 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF012537;product=conserved hypothetical protein;protein_id=CAL12116.1;transl_table=11
AM286415.1	EMBL	gene	2231499	2231954	.	+	.	ID=gene2013;Name=YE2040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2040
AM286415.1	EMBL	CDS	2231499	2231954	.	+	0	ID=cds1947;Parent=gene2013;Dbxref=EnsemblGenomes-Gn:YE2040,EnsemblGenomes-Tr:CAL12117,GOA:A1JMU1,InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,InterPro:IPR019887,InterPro:IPR019888,UniProtKB/TrEMBL:A1JMU1,NCBI_GP:CAL12117.1;Name=CAL12117.1;Note=Similar to many leucine-responsive regulatory proteins including: Escherichia coli%2C Escherichia coli O157:H7%2C and Enterobacter aerogenes Lrp or AlsB or LivR or Ihb or oppi or b0889 or z1234 or ecs0974 SWALL:LRP_ECOLI (SWALL:P19494) (163 aa) fasta scores: E(): 2.5e-13%2C 42.53 id in 134 aa and Rhizobium loti transcriptional regulator Mll7129 SWALL:Q987B0 (EMBL:AP003011) (163 aa) fasta scores: E(): 3.2e-15%2C 35.17 38d in 145 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P19494;product=probable leucine-responsive regulatory protein;protein_id=CAL12117.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2231589	2231897	.	+	.	ID=id3697;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 68.1%2C E-value 1.2e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF01037
AM286415.1	EMBL	pseudogene	2232527	2232697	.	-	.	ID=gene2014;Name=YE2041;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2041;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	2231975	2232523	.	-	.	ID=gene2014;Name=YE2041;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2041;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	2232527	2232697	.	-	0	ID=cds1948;Parent=gene2014;Dbxref=PSEUDO:CAL12118.1;Note=Similar to many amino acid transporters including: Escherichia coli%2C and Escherichia coli O157:H7 histidine transport system permease protein HisM or b2307 or z3569 or ecs3191 SWALL:HISM_ECOLI (SWALL:P20091) (238 aa) fasta scores: E(): 3.3e-29%2C 42.03 38d in 226 aa and to Pseudomonas aeruginosa arginine/ornithine transport protein AotM or Pa0890 SWALL:O50183 (EMBL:AF012537) (232 aa) fasta scores: E(): 2.5e-31%2C 44.91 38d in 236 aa. Note this CDS contains a premature stop codon following codon 57.;gbkey=CDS;inference=similar to sequence:UniProtKB:P20091;product=amino acid transport system permease (pseugdogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2231975	2232523	.	-	0	ID=cds1948;Parent=gene2014;Dbxref=PSEUDO:CAL12118.1;Note=Similar to many amino acid transporters including: Escherichia coli%2C and Escherichia coli O157:H7 histidine transport system permease protein HisM or b2307 or z3569 or ecs3191 SWALL:HISM_ECOLI (SWALL:P20091) (238 aa) fasta scores: E(): 3.3e-29%2C 42.03 38d in 226 aa and to Pseudomonas aeruginosa arginine/ornithine transport protein AotM or Pa0890 SWALL:O50183 (EMBL:AF012537) (232 aa) fasta scores: E(): 2.5e-31%2C 44.91 38d in 236 aa. Note this CDS contains a premature stop codon following codon 57.;gbkey=CDS;inference=similar to sequence:UniProtKB:P20091;product=amino acid transport system permease (pseugdogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2232419	2232487	.	-	.	ID=id3698;Note=4 probable transmembrane helices predicted for YE2041 by TMHMM2.0 at aa 13-35%2C 48-70%2C 114-136 and 146-168;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2232314	2232382	.	-	.	ID=id3698;Note=4 probable transmembrane helices predicted for YE2041 by TMHMM2.0 at aa 13-35%2C 48-70%2C 114-136 and 146-168;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2232116	2232184	.	-	.	ID=id3698;Note=4 probable transmembrane helices predicted for YE2041 by TMHMM2.0 at aa 13-35%2C 48-70%2C 114-136 and 146-168;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2232020	2232088	.	-	.	ID=id3698;Note=4 probable transmembrane helices predicted for YE2041 by TMHMM2.0 at aa 13-35%2C 48-70%2C 114-136 and 146-168;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	2232092	2232313	.	-	.	ID=id3699;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 34.9%2C E-value 1.2e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	2232542	2232610	.	-	.	ID=id3700;Note=1 probable transmembrane helix predicted for YE2042 by TMHMM2.0 at aa 30-52;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2232697	2233389	.	-	.	ID=gene2015;Name=YE2043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2043
AM286415.1	EMBL	CDS	2232697	2233389	.	-	0	ID=cds1949;Parent=gene2015;Dbxref=EnsemblGenomes-Gn:YE2043,EnsemblGenomes-Tr:CAL12119,GOA:A1JMV2,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JMV2,NCBI_GP:CAL12119.1;Name=CAL12119.1;Note=Similar to many amino acid transporters including: Escherichia coli histidine transport system permease protein HisQ or b2308 SWALL:HISQ_ECOLI (SWALL:P52094) (228 aa) fasta scores: E(): 4.5e-34%2C 42.92 38d in 226 aa and to Pseudomonas aeruginosa arginine/ornithine transport protein AotQ or pa0889 SWALL:Q9I557 (EMBL:AE004523) (229 aa) fasta scores: E(): 1.8e-37%2C 48.45 38d in 227 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P52094;product=amino acid transport system permease protein;protein_id=CAL12119.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2233291	2233359	.	-	.	ID=id3701;Note=5 probable transmembrane helices predicted for YE2043 by TMHMM2.0 at aa 32-54%2C 75-97%2C 107-129%2C 170-192 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2233162	2233230	.	-	.	ID=id3701;Note=5 probable transmembrane helices predicted for YE2043 by TMHMM2.0 at aa 32-54%2C 75-97%2C 107-129%2C 170-192 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2233066	2233134	.	-	.	ID=id3701;Note=5 probable transmembrane helices predicted for YE2043 by TMHMM2.0 at aa 32-54%2C 75-97%2C 107-129%2C 170-192 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2232877	2232945	.	-	.	ID=id3701;Note=5 probable transmembrane helices predicted for YE2043 by TMHMM2.0 at aa 32-54%2C 75-97%2C 107-129%2C 170-192 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2232751	2232819	.	-	.	ID=id3701;Note=5 probable transmembrane helices predicted for YE2043 by TMHMM2.0 at aa 32-54%2C 75-97%2C 107-129%2C 170-192 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	2232817	2233047	.	-	.	ID=id3702;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 53.6%2C E-value 2.9e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	2232958	2233044	.	-	.	ID=id3703;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	sequence_feature	2233033	2233080	.	-	.	ID=id3704;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	gene	2233469	2234242	.	-	.	ID=gene2016;Name=YE2044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2044
AM286415.1	EMBL	CDS	2233469	2234242	.	-	0	ID=cds1950;Parent=gene2016;Dbxref=EnsemblGenomes-Gn:YE2044,EnsemblGenomes-Tr:CAL12120,GOA:A1JMV8,InterPro:IPR001638,InterPro:IPR018313,UniProtKB/TrEMBL:A1JMV8,NCBI_GP:CAL12120.1;Name=CAL12120.1;Note=Similar to many amino acid transporters including: Salmonella typhimurium lysine-arginine-ornithine-binding periplasmic protein precursor ArgT or Stm2355 SWALL:ARGT_SALTY (SWALL:P02911) (260 aa) fasta scores: E(): 1.8e-41%2C 44.61 38d in 260 aa and to Escherichia coli lysine-arginine-ornithine-binding periplasmic protein precursor ArgT or b2310 SWALL:ARGT_ECOLI (SWALL:P09551) (260 aa) fasta scores: E(): 4.8e-41%2C 45 38d in 260 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P09551;product=amino acid-binding periplasmic protein precursor;protein_id=CAL12120.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2233487	2234167	.	-	.	ID=id3705;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 275.2%2C E-value 5.4e-80;gbkey=misc_feature;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	sequence_feature	2234060	2234101	.	-	.	ID=id3706;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01039
AM286415.1	EMBL	gene	2234269	2235027	.	-	.	ID=gene2017;Name=YE2045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2045
AM286415.1	EMBL	CDS	2234269	2235027	.	-	0	ID=cds1951;Parent=gene2017;Dbxref=EnsemblGenomes-Gn:YE2045,EnsemblGenomes-Tr:CAL12121,GOA:A1JMW0,InterPro:IPR003198,UniProtKB/TrEMBL:A1JMW0,NCBI_GP:CAL12121.1;Name=CAL12121.1;Note=Similar to Streptomyces coelicolor ng%2Cng-dimethylarginine dimethylaminohydrolase DdaH or sco6718 or sc5f2a.01C SWALL:DDAH_STRCO (SWALL:Q9X7M4) (258 aa) fasta scores: E(): 1.3e-15%2C 31.76 38d in 255 aa and to Homo sapiens ng%2Cng-dimethylarginine dimethylaminohydrolase 1 DdaH1 SWALL:DDH1_HUMAN (SWALL:O94760) (284 aa) fasta scores: E(): 3.3e-15%2C 33.83 38d in 266 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9X7M4;product=putative hydrolase;protein_id=CAL12121.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2234272	2235015	.	-	.	ID=id3707;Note=Pfam match to entry PF02274 Amidinotransf%2CAmidinotransferase%2C score 97.5%2C E-value 1.7e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF02274
AM286415.1	EMBL	gene	2235413	2236402	.	-	.	ID=gene2018;Name=YE2047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2047
AM286415.1	EMBL	CDS	2235413	2236402	.	-	0	ID=cds1952;Parent=gene2018;Dbxref=EnsemblGenomes-Gn:YE2047,EnsemblGenomes-Tr:CAL12122,GOA:A1JMW2,InterPro:IPR003010,UniProtKB/TrEMBL:A1JMW2,NCBI_GP:CAL12122.1;Name=CAL12122.1;Note=Weakly similar to many including: Agrobacterium tumefaciens amidohydrolase Atu5536 or agr_pat_799 SWALL:Q8UJE1 (EMBL:AE008973) (600 aa) fasta scores: E(): 6.8e-11%2C 26.92 38d in 312 aa and to Pyrococcus furiosus hypothetical protein Pf1017 SWALL:AAL81141 (EMBL:AE010213) (262 aa) fasta scores: E(): 9.4e-11%2C 26.15 38d in 302 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE010213;product=putative hydrolase;protein_id=CAL12122.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2235500	2236387	.	-	.	ID=id3708;Note=Pfam match to entry PF00795 CN_hydrolase%2CCarbon-nitrogen hydrolase%2C score 106.3%2C E-value 4e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF00795
AM286415.1	EMBL	gene	2236516	2237382	.	+	.	ID=gene2019;Name=YE2048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2048
AM286415.1	EMBL	CDS	2236516	2237382	.	+	0	ID=cds1953;Parent=gene2019;Dbxref=EnsemblGenomes-Gn:YE2048,EnsemblGenomes-Tr:CAL12123,GOA:A1JMW3,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JMW3,NCBI_GP:CAL12123.1;Name=CAL12123.1;Note=Similar to many LysR-family transcriptional regulatory proteins including: Alcaligenes eutrophus transcriptional regulatory protein TdfR/TfdS(tfds or tfdo) SWALL:TFDR_ALCEU (SWALL:P10086) (295 aa) fasta scores: E(): 5.7e-16%2C 29.78 38d in 282 aa and to Rhizobium meliloti putative transcriptional regulator protein Rb0012 or Smb20009 SWALL:Q92XF0 (EMBL:AL603642) (309 aa) fasta scores: E(): 7.6e-18%2C 31.06 38d in 264 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P10086;product=LysR-family transcriptional regulatory protein;protein_id=CAL12123.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2236522	2236701	.	+	.	ID=id3709;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 77.4%2C E-value 1.9e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2236561	2236626	.	+	.	ID=id3710;Note=Predicted helix-turn-helix motif with score 1743.000%2C SD 5.12 at aa 16-37%2C sequence GNYGDAAQALCVTQPALTKQIN;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	2236564	2236656	.	+	.	ID=id3711;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	2236771	2237349	.	+	.	ID=id3712;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 87.5%2C E-value 1.8e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	2237459	2240038	.	-	.	ID=gene2020;Name=YE2049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2049
AM286415.1	EMBL	CDS	2237459	2240038	.	-	0	ID=cds1954;Parent=gene2020;Dbxref=EnsemblGenomes-Gn:YE2049,EnsemblGenomes-Tr:CAL12124,GOA:A1JMW6,InterPro:IPR004899,InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR011050,InterPro:IPR012332,UniProtKB/TrEMBL:A1JMW6,NCBI_GP:CAL12124.1;Name=CAL12124.1;Note=Weakly similar to many autotransporter proteins including: Yersinia pestis YapD protein SWALL:Q9F289 (EMBL:AJ277627) (1457 aa) fasta scores: E(): 2.6e-42%2C35.07 38d in 844 aa and to Bordetella pertussis pertactin-family protein BapA protein SWALL:Q9F4B4 (EMBL:AJ277632) (903 aa) fasta scores: E(): 5.4e-28%2C27.35 38d in 848 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ277632;product=putative autotransporter protein;protein_id=CAL12124.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2237462	2238355	.	-	.	ID=id3713;Note=Pfam match to entry PF03797 Autotransporter%2CAutotransporter beta-domain%2C score 220.8%2C E-value 1.3e-63;gbkey=misc_feature;inference=protein motif:PFAM:PF03797
AM286415.1	EMBL	sequence_feature	2238470	2238817	.	-	.	ID=id3714;Note=Pfam match to entry PF03212 Pertactin%2C Pertactin %2Cscore -28.1%2C E-value 0.00034;gbkey=misc_feature;inference=protein motif:PFAM:PF03212
AM286415.1	EMBL	gene	2240179	2240892	.	-	.	ID=gene2021;Name=YE2050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2050
AM286415.1	EMBL	CDS	2240179	2240892	.	-	0	ID=cds1955;Parent=gene2021;Dbxref=EnsemblGenomes-Gn:YE2050,EnsemblGenomes-Tr:CAL12125,GOA:A1JMX2,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JMX2,NCBI_GP:CAL12125.1;Name=CAL12125.1;Note=Weakly similar in parts to Pseudomonas aeruginosa probable two-component response regulator Pa3948 SWALL:Q9HX68 (EMBL:AE004813) (209 aa) fasta scores: E(): 0.00023%2C 23.97 38d in 171 aa and Staphylococcus aureus regulatory protein Sa1666 protein or sa1666 SWALL:Q99T30 (EMBL:AP003363) (207 aa) fasta scores: E(): 0.00055%2C25.77 38d in 194 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003363;product=putative LuxR-family transcriptional regulatory protein;protein_id=CAL12125.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2240185	2240376	.	-	.	ID=id3715;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 55.5%2C E-value 7.4e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	gene	2241111	2242058	.	+	.	ID=gene2022;Name=YE2051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2051
AM286415.1	EMBL	CDS	2241111	2242058	.	+	0	ID=cds1956;Parent=gene2022;Dbxref=EnsemblGenomes-Gn:YE2051,EnsemblGenomes-Tr:CAL12126,GOA:A1JMX6,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JMX6,NCBI_GP:CAL12126.1;Name=CAL12126.1;Note=Similar to many putative regulatory proteins including: Streptomyces coelicolor putative LysR-family transcriptional regulatory protein Sco7438 or Sc6d11.34 SWALL:Q9L122 (EMBL:AL158061) (311 aa) fasta scores: E(): 4.3e-14%2C 27.77 38d in 306 aa and Escherichia coli hypothetical transcriptional regulator YbdO or b0603 SWALL:YBDO_ECOLI (SWALL:P77746) (300 aa) fasta scores: E(): 3e-11%2C 25.34 38d in 292 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77746;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL12126.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2241129	2241308	.	+	.	ID=id3716;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 30.3%2C E-value 2.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2241168	2241233	.	+	.	ID=id3717;Note=Predicted helix-turn-helix motif with score 1354.000%2C SD 3.80 at aa 20-41%2C sequence GTVSQTAVRLDMSASAVSVVLN;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	2241171	2241263	.	+	.	ID=id3718;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	2241384	2242016	.	+	.	ID=id3719;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 25.1%2C E-value 2e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	2242061	2243521	.	-	.	ID=gene2023;Name=amn;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=YE2052
AM286415.1	EMBL	CDS	2242061	2243521	.	-	0	ID=cds1957;Parent=gene2023;Dbxref=EnsemblGenomes-Gn:YE2052,EnsemblGenomes-Tr:CAL12127,GOA:A1JMY0,InterPro:IPR000845,InterPro:IPR011271,InterPro:IPR018017,InterPro:IPR018953,UniProtKB/TrEMBL:A1JMY0,NCBI_GP:CAL12127.1;Name=CAL12127.1;gbkey=CDS;gene=amn;product=putative AMP nucleosidase;protein_id=CAL12127.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2242136	2242843	.	-	.	ID=id3720;Note=Pfam match to entry PF01048 PNP_UDP_1%2CPhosphorylase family%2C score 286.5%2C E-value 2.2e-83;gbkey=misc_feature;gene=amn;inference=protein motif:PFAM:PF01048
AM286415.1	EMBL	gene	2243670	2244665	.	+	.	ID=gene2024;Name=YE2053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2053
AM286415.1	EMBL	CDS	2243670	2244665	.	+	0	ID=cds1958;Parent=gene2024;Dbxref=EnsemblGenomes-Gn:YE2053,EnsemblGenomes-Tr:CAL12128,GOA:A1JMY3,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JMY3,NCBI_GP:CAL12128.1;Name=CAL12128.1;Note=Similar to many regulatory proteins%2C including: Bacillus halodurans ribose operon repressor RbsR or Bh3727 SWALL:RBSR_BACHD (SWALL:Q9K6K2) (331 aa) fasta scores: E(): 2.9e-20%2C 30.67 38d in 326 aa and to Rhizobium meliloti putative transcriptional regulator protein Rb0154 or Smb20154 SWALL:Q92X08 (EMBL:AL603642) (328 aa) fasta scores: E(): 5.8e-34%2C 38.18 38d in 330 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9K6K2;product=putative transcriptional regulatory protein;protein_id=CAL12128.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2243694	2243759	.	+	.	ID=id3721;Note=Predicted helix-turn-helix motif with score 1995.000%2C SD 5.98 at aa 23-44%2C sequence VTASDVARLAGVSRSAVSRTFT;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	2243865	2244656	.	+	.	ID=id3722;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 60.5%2C E-value 2.3e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	2244805	2245617	.	+	.	ID=gene2025;Name=YE2054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2054
AM286415.1	EMBL	CDS	2244805	2245617	.	+	0	ID=cds1959;Parent=gene2025;Dbxref=EnsemblGenomes-Gn:YE2054,EnsemblGenomes-Tr:CAL12129,GOA:A1JMY7,InterPro:IPR000760,InterPro:IPR020583,UniProtKB/TrEMBL:A1JMY7,NCBI_GP:CAL12129.1;Name=CAL12129.1;Note=Similar to many including: Synechocystis sp. inositol-1-monophosphatase SuhB or Sll1383 SWALL:SUHB_SYNY3 (SWALL:P74158) (287 aa) fasta scores: E(): 9.5e-26%2C 36.5 38d in 263 aa%2C Brucella melitensis myo-inositol-1 BmeII0568 SWALL:Q8YCG2 (EMBL:AE009693) (266 aa) fasta scores: E(): 2.1e-45%2C 47.89 38d in 261 aa and to Rhizobium meliloti inositol-1-monophosphatase SuhB or R02778 or smc03994 SWALL:SUHB_RHIME (SWALL:Q92M71) (266 aa) fasta scores: E(): 6e-25%2C 37.98 38d in 258 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q92M71;product=putative inositol-1-monophosphatase;protein_id=CAL12129.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2244826	2245611	.	+	.	ID=id3723;Note=Pfam match to entry PF00459 inositol_P%2C Inositol monophosphatase family%2C score 202.7%2C E-value 3.7e-58;gbkey=misc_feature;inference=protein motif:PFAM:PF00459
AM286415.1	EMBL	sequence_feature	2245072	2245113	.	+	.	ID=id3724;Note=PS00629 Inositol monophosphatase family signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00629
AM286415.1	EMBL	gene	2245759	2247165	.	+	.	ID=gene2026;Name=YE2055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2055
AM286415.1	EMBL	CDS	2245759	2247165	.	+	0	ID=cds1960;Parent=gene2026;Dbxref=EnsemblGenomes-Gn:YE2055,EnsemblGenomes-Tr:CAL12130,GOA:A1JMY8,InterPro:IPR000849,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JMY8,NCBI_GP:CAL12130.1;Name=CAL12130.1;Note=Similar to many putative regulatory proteins including: Escherichia coli regulatory protein UhpC or b3667 SWALL:UHPC_ECOLI (SWALL:P09836) (439 aa) fasta scores: E(): 7.1e-32%2C 27.88 38d in 416 aa%2C Vibrio cholerae regulatory protein UhpC%2C putative Vca0707 SWALL:Q9KLN6 (EMBL:AE004400) (459 aa) fasta scores: E(): 5.2e-59%2C38.53 38d in 436 aa and to Salmonella typhi regulatory protein Sty3994 SWALL:Q8Z2K5 (EMBL:AL627280) (442 aa) fasta scores: E(): 8.5e-35%2C 29.58 38d in 453 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P09836;product=putative inner-membrane regulatory protein;protein_id=CAL12130.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2245894	2247162	.	+	.	ID=id3725;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -113.8%2C E-value 0.00076;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	2245894	2245962	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2246005	2246073	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2246086	2246154	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2246167	2246235	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2246272	2246340	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2246350	2246418	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2246542	2246595	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2246653	2246721	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2246746	2246805	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2246833	2246901	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2246935	2247003	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2247061	2247129	.	+	.	ID=id3726;Note=12 probable transmembrane helices predicted for YE2055 by TMHMM2.0 at aa 46-68%2C 83-105%2C 110-132%2C 137-159%2C172-194%2C 198-220%2C 262-279%2C 299-321%2C 330-349%2C 359-381%2C393-415 and 435-457;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	2247673	2248977	.	+	.	ID=gene2027;Name=YE2057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2057
AM286415.1	EMBL	CDS	2247673	2248977	.	+	0	ID=cds1961;Parent=gene2027;Dbxref=EnsemblGenomes-Gn:YE2057,EnsemblGenomes-Tr:CAL12131,UniProtKB/TrEMBL:A1JMZ1,NCBI_GP:CAL12131.1;Name=CAL12131.1;gbkey=CDS;product=putative virulence factor;protein_id=CAL12131.1;transl_table=11
AM286415.1	EMBL	gene	2248982	2252017	.	+	.	ID=gene2028;Name=YE2058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2058
AM286415.1	EMBL	CDS	2248982	2252017	.	+	0	ID=cds1962;Parent=gene2028;Dbxref=EnsemblGenomes-Gn:YE2058,EnsemblGenomes-Tr:CAL12132,InterPro:IPR009216,UniProtKB/TrEMBL:A1JMZ2,NCBI_GP:CAL12132.1;Name=CAL12132.1;gbkey=CDS;product=putative virulence factor;protein_id=CAL12132.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2250659	2250682	.	+	.	ID=id3727;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2252014	2254440	.	+	.	ID=gene2029;Name=YE2059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2059
AM286415.1	EMBL	CDS	2252014	2254440	.	+	0	ID=cds1963;Parent=gene2029;Dbxref=EnsemblGenomes-Gn:YE2059,EnsemblGenomes-Tr:CAL12133,InterPro:IPR017030,UniProtKB/TrEMBL:A1JMZ4,NCBI_GP:CAL12133.1;Name=CAL12133.1;gbkey=CDS;product=putative virulence factor;protein_id=CAL12133.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2252293	2252316	.	+	.	ID=id3728;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2254911	2256593	.	+	.	ID=gene2030;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=YE2060
AM286415.1	EMBL	CDS	2254911	2256593	.	+	0	ID=cds1964;Parent=gene2030;Dbxref=EnsemblGenomes-Gn:YE2060,EnsemblGenomes-Tr:CAL12134,GOA:A1JMZ6,InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012846,InterPro:IPR029035,InterPro:IPR029061,UniProtKB/TrEMBL:A1JMZ6,NCBI_GP:CAL12134.1;Name=CAL12134.1;gbkey=CDS;gene=ilvB;product=putative acetolactate synthase large subunit;protein_id=CAL12134.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2254926	2255444	.	+	.	ID=id3729;Note=Pfam match to entry PF02776 TPP_enzymes_N%2C Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain %2Cscore 324.3%2C E-value 8.9e-95;gbkey=misc_feature;gene=ilvB;inference=protein motif:PFAM:PF02776
AM286415.1	EMBL	sequence_feature	2255484	2255951	.	+	.	ID=id3730;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzyme%2C central domain%2C score 227.2%2CE-value 1.5e-65;gbkey=misc_feature;gene=ilvB;inference=protein motif:PFAM:PF00205
AM286415.1	EMBL	sequence_feature	2255988	2256515	.	+	.	ID=id3731;Note=Pfam match to entry PF02775 TPP_enzymes_C%2C Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain %2Cscore 273.8%2C E-value 1.4e-79;gbkey=misc_feature;gene=ilvB;inference=protein motif:PFAM:PF02775
AM286415.1	EMBL	sequence_feature	2256180	2256239	.	+	.	ID=id3732;Note=PS00187 Thiamine pyrophosphate enzymes signature.;gbkey=misc_feature;gene=ilvB;inference=protein motif:Prosite:PS00187
AM286415.1	EMBL	gene	2256634	2256900	.	+	.	ID=gene2031;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=YE2061
AM286415.1	EMBL	CDS	2256634	2256900	.	+	0	ID=cds1965;Parent=gene2031;Dbxref=EnsemblGenomes-Gn:YE2061,EnsemblGenomes-Tr:CAL12135,GOA:A1JN02,InterPro:IPR002912,UniProtKB/TrEMBL:A1JN02,NCBI_GP:CAL12135.1;Name=CAL12135.1;gbkey=CDS;gene=ilvN;product=putative acetolactate synthase small subunit;protein_id=CAL12135.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2256634	2256843	.	+	.	ID=id3733;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 23.2%2C E-value 0.0004;gbkey=misc_feature;gene=ilvN;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	gene	2257016	2257690	.	-	.	ID=gene2032;Name=YE2062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2062
AM286415.1	EMBL	CDS	2257016	2257690	.	-	0	ID=cds1966;Parent=gene2032;Dbxref=EnsemblGenomes-Gn:YE2062,EnsemblGenomes-Tr:CAL12136,GOA:A1JN06,InterPro:IPR006439,InterPro:IPR011951,InterPro:IPR023198,InterPro:IPR023214,UniProtKB/TrEMBL:A1JN06,NCBI_GP:CAL12136.1;Name=CAL12136.1;gbkey=CDS;product=haloacid dehalogenase-like hydrolase family protein;protein_id=CAL12136.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2257097	2257684	.	-	.	ID=id3734;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 91.3%2C E-value 1.2e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	2257139	2257180	.	-	.	ID=id3735;Note=PS00761 Signal peptidases I signature 3.;gbkey=misc_feature;inference=protein motif:Prosite:PS00761
AM286415.1	EMBL	gene	2257783	2260158	.	-	.	ID=gene2033;Name=YE2063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2063
AM286415.1	EMBL	CDS	2257783	2260158	.	-	0	ID=cds1967;Parent=gene2033;Dbxref=EnsemblGenomes-Gn:YE2063,EnsemblGenomes-Tr:CAL12137,InterPro:IPR025266,InterPro:IPR028932,InterPro:IPR029024,UniProtKB/TrEMBL:A1JN08,NCBI_GP:CAL12137.1;Name=CAL12137.1;Note=Similar over the entire range to Yersinia pestis KIM hypothetical Y2129 SWALL:AAM85691 (EMBL:AE013816) (798 aa) fasta scores: E(): 0%2C 72.3 38d in 798 aa. The N-terminus of the predicted product of this CDS is similar to Yersinia pestis putative membrane protein Ypo2297 SWALL:Q8ZE85 (EMBL:AJ414151) (336 aa) fasta scores: E(): 3.8e-90%2C 73 38d in 326 aa and in the C-terminus to Yersinia pestis hypothetical protein Ypo2296 SWALL:Q8ZE86 (EMBL:AJ414151) (461 aa) fasta scores: E(): 8.5e-131%2C71.89 38d in 459 aa. This is likely to indicate that Ypo2297 and Ypo2296 are parts of the same pseudogene in Y. pestis CO92.;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=conserved exported protein;protein_id=CAL12137.1;transl_table=11
AM286415.1	EMBL	gene	2260560	2261339	.	+	.	ID=gene2034;Name=YE2064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2064
AM286415.1	EMBL	CDS	2260560	2261339	.	+	0	ID=cds1968;Parent=gene2034;Dbxref=EnsemblGenomes-Gn:YE2064,EnsemblGenomes-Tr:CAL12138,GOA:A1JN11,InterPro:IPR005123,UniProtKB/TrEMBL:A1JN11,NCBI_GP:CAL12138.1;Name=CAL12138.1;Note=Weakly similar to Streptomyces griseus A-factor receptor protein ArpA SWALL:Q54223 (EMBL:X79605) (250 aa) fasta scores: E(): 0.0004%2C 22.91 38d in 240 aa;gbkey=CDS;inference=similar to sequence:INSDC:X79605;product=hypothetical protein;protein_id=CAL12138.1;transl_table=11
AM286415.1	EMBL	gene	2261532	2262545	.	-	.	ID=gene2035;Name=YE2065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2065
AM286415.1	EMBL	CDS	2261532	2262545	.	-	0	ID=cds1969;Parent=gene2035;Dbxref=EnsemblGenomes-Gn:YE2065,EnsemblGenomes-Tr:CAL12139,GOA:A1JN13,InterPro:IPR011013,InterPro:IPR027839,UniProtKB/TrEMBL:A1JN13,NCBI_GP:CAL12139.1;Name=CAL12139.1;Note=Similar to several proteins of unknown function including: Salmonella typhimurium putative cytoplasmic protein Stm3791 SWALL:Q8ZL16 (EMBL:AE008876) (337 aa) fasta scores: E(): 1.4e-94%2C 65.28 38d in 337 aa and to Salmonella typhi hypothetical protein Sty3991 SWALL:Q8Z2K8 (EMBL:AL627280) (337 aa) fasta scores: E(): 3.7e-93%2C64.68 38d in 337 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627280;product=conserved hypothetical protein;protein_id=CAL12139.1;transl_table=11
AM286415.1	EMBL	gene	2262567	2263898	.	-	.	ID=gene2036;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=YE2066
AM286415.1	EMBL	CDS	2262567	2263898	.	-	0	ID=cds1970;Parent=gene2036;Dbxref=EnsemblGenomes-Gn:YE2066,EnsemblGenomes-Tr:CAL12140,GOA:A1JN14,InterPro:IPR005275,InterPro:IPR011701,InterPro:IPR016196,UniProtKB/TrEMBL:A1JN14,NCBI_GP:CAL12140.1;Name=CAL12140.1;Note=Similar to Escherichia coli L-fucose permease FucP or b2801 SWALL:FUCP_ECOLI (SWALL:P11551) (438 aa) fasta scores: E(): 3.1e-51%2C 35.66 38d in 429 aa and to Salmonella typhimurium%2C and Salmonella typhi putative L-fucose permease Stm3792 or Sty3990 SWALL:Q8XEV7 (EMBL:AE008876) (438 aa) fasta scores: E(): 2.4e-128%2C76.6 38d in 436 aa;gbkey=CDS;gene=fucP;inference=similar to sequence:UniProtKB:P11551;product=L-fucose permease;protein_id=CAL12140.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2263770	2263838	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2263665	2263733	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2263587	2263646	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2263518	2263577	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2263389	2263457	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2263224	2263283	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2263047	2263115	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2262960	2263019	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2262888	2262941	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2262810	2262878	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2262705	2262773	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2262624	2262677	.	-	.	ID=id3736;Note=12 probable transmembrane helices predicted for YE2066 by TMHMM2.0 at aa 21-43%2C 56-78%2C 85-104%2C 108-127%2C148-170%2C 206-225%2C 262-284%2C 294-313%2C 320-337%2C 341-363%2C376-398 and 408-425;gbkey=misc_feature;gene=fucP;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2263821	2263853	.	-	.	ID=id3737;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=fucP;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2263900	2264829	.	-	.	ID=gene2037;Name=YE2067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2067
AM286415.1	EMBL	CDS	2263900	2264829	.	-	0	ID=cds1971;Parent=gene2037;Dbxref=EnsemblGenomes-Gn:YE2067,EnsemblGenomes-Tr:CAL12141,GOA:A1JN17,InterPro:IPR002139,InterPro:IPR011611,InterPro:IPR011877,InterPro:IPR017583,InterPro:IPR029056,UniProtKB/TrEMBL:A1JN17,NCBI_GP:CAL12141.1;Name=CAL12141.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 ribokinase RbsK or b3752 or z5253 or ecs4694 SWALL:RBSK_ECOLI (SWALL:P05054) (309 aa) fasta scores: E(): 9.7e-32%2C 38.94 38d in 303 aa and to Salmonella typhimurium%2C and Salmonella typhi putative sugar kinase%2Cribokinase family Stm3793 or sty3989 SWALL:Q8XGW5 (EMBL:AE008876) (306 aa) fasta scores: E(): 5.7e-77%2C65.56 38d in 302 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P05054;product=putative carbohydrate kinase;protein_id=CAL12141.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2263945	2264829	.	-	.	ID=id3738;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 228.3%2C E-value 7.3e-66;gbkey=misc_feature;inference=protein motif:PFAM:PF00294
AM286415.1	EMBL	sequence_feature	2264647	2264721	.	-	.	ID=id3739;Note=PS00583 pfkB family of carbohydrate kinases signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00583
AM286415.1	EMBL	gene	2265109	2266518	.	-	.	ID=gene2038;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=YE2068
AM286415.1	EMBL	CDS	2265109	2266518	.	-	0	ID=cds1972;Parent=gene2038;Dbxref=EnsemblGenomes-Gn:YE2068,EnsemblGenomes-Tr:CAL12142,GOA:A1JN18,InterPro:IPR001952,InterPro:IPR017849,InterPro:IPR017850,InterPro:IPR018299,UniProtKB/TrEMBL:A1JN18,NCBI_GP:CAL12142.1;Name=CAL12142.1;gbkey=CDS;gene=phoA;product=alkaline phosphatase precursor;protein_id=CAL12142.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2265115	2266440	.	-	.	ID=id3740;Note=Pfam match to entry PF00245 alk_phosphatase%2CAlkaline phosphatase%2C score 720.9%2C E-value 3.9e-214;gbkey=misc_feature;gene=phoA;inference=protein motif:PFAM:PF00245
AM286415.1	EMBL	sequence_feature	2266138	2266164	.	-	.	ID=id3741;Note=PS00123 Alkaline phosphatase active site.;gbkey=misc_feature;gene=phoA;inference=protein motif:Prosite:PS00123
AM286415.1	EMBL	gene	2266718	2267458	.	-	.	ID=gene2039;Name=YE2069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2069
AM286415.1	EMBL	CDS	2266718	2267458	.	-	0	ID=cds1973;Parent=gene2039;Dbxref=EnsemblGenomes-Gn:YE2069,EnsemblGenomes-Tr:CAL12143,GOA:A1JN23,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,UniProtKB/TrEMBL:A1JN23,NCBI_GP:CAL12143.1;Name=CAL12143.1;Note=Similar to many short chain dehydrogeneases including: Bacillus subtilis 3-oxoacyl-[acyl-carrier protein] reductase FabG SWALL:FABG_BACSU (SWALL:P51831) (246 aa) fasta scores: E(): 9.1e-26%2C 38.68 38d in 243 aa and Rhizobium meliloti putative short chain dehydrogenasereductase protein Rb0475 or Smb20493 SWALL:Q92W70 (EMBL:AL603643) (244 aa) fasta scores: E(): 3.3e-57%2C 69.58 38d in 240 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51831;product=putative short chain dehydrogenease;protein_id=CAL12143.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2266724	2267446	.	-	.	ID=id3742;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 245.9%2C E-value 3.7e-71;gbkey=misc_feature;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	gene	2267674	2268147	.	-	.	ID=gene2040;Name=gyrI;gbkey=Gene;gene=gyrI;gene_biotype=protein_coding;locus_tag=YE2070
AM286415.1	EMBL	CDS	2267674	2268147	.	-	0	ID=cds1974;Parent=gene2040;Dbxref=EnsemblGenomes-Gn:YE2070,EnsemblGenomes-Tr:CAL12144,GOA:A1JN27,InterPro:IPR010499,InterPro:IPR011256,InterPro:IPR024911,InterPro:IPR029442,NCBI_GP:CAL12144.1;Name=CAL12144.1;Note=Similar to Escherichia coli DNA gyrase inhibitory protein GyrI or SbmC or b2009 SWALL:GYRI_ECOLI (SWALL:P33012) (157 aa) fasta scores: E(): 1.1e-18%2C 37.66 id in 154 aa and to Salmonella typhimurium%2C and Salmonella typhi DNA gyrase inhibitory protein homolog GyrI or SbmC or stm2272 or sty2266 SWALL:GYRI_SALTY (SWALL:P41781) (155 aa) fasta scores: E(): 4.2e-18%2C 34.83 38d in 155 aa;gbkey=CDS;gene=gyrI;inference=similar to sequence:UniProtKB:P41781;product=DNA gyrase inhibitory protein;protein_id=CAL12144.1;transl_table=11
AM286415.1	EMBL	gene	2268244	2268762	.	-	.	ID=gene2041;Name=YE2071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2071
AM286415.1	EMBL	CDS	2268244	2268762	.	-	0	ID=cds1975;Parent=gene2041;Dbxref=EnsemblGenomes-Gn:YE2071,EnsemblGenomes-Tr:CAL12145,InterPro:IPR007553,UniProtKB/TrEMBL:A1JN29,NCBI_GP:CAL12145.1;Name=CAL12145.1;Note=Similar to many proteins of undefined function including: Rhizobium meliloti hypothetical protein R00856 or Smc00850 SWALL:Q92RL1 (EMBL:AL591785) (172 aa) fasta scores: E(): 7e-31%2C 55.26 38d in 152 aa and to Ralstonia solanacearum hypothetical protein Rsc1374 or Rs04657 SWALL:Q8XZM1 (EMBL:AL646064) (173 aa) fasta scores: E(): 6.6e-30%2C 54.77 38d in 157 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646064;product=conserved hypothetical protein;protein_id=CAL12145.1;transl_table=11
AM286415.1	EMBL	gene	2269076	2269891	.	-	.	ID=gene2042;Name=YE2073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2073
AM286415.1	EMBL	CDS	2269076	2269891	.	-	0	ID=cds1976;Parent=gene2042;Dbxref=EnsemblGenomes-Gn:YE2073,EnsemblGenomes-Tr:CAL12146,GOA:A1JN31,InterPro:IPR002508,InterPro:IPR007709,InterPro:IPR011227,UniProtKB/TrEMBL:A1JN31,NCBI_GP:CAL12146.1;Name=CAL12146.1;Note=Similar to many proteins of undefined function including: Rhizobium meliloti hypothetical protein R02581 or Smc02354 SWALL:Q92MN2 (EMBL:AL591791) (271 aa) fasta scores: E(): 9.9e-33%2C 39.91 38d in 243 aa and to Agrobacterium tumefaciens hypothetical protein atu2144 or agr_c_3887 SWALL:Q8UDI1 (EMBL:AE009164) (257 aa) fasta scores: E(): 2.9e-25%2C 36.99 38d in 246 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591791;product=conserved hypothetical protein;protein_id=CAL12146.1;transl_table=11
AM286415.1	EMBL	gene	2270141	2270659	.	+	.	ID=gene2043;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=YE2074
AM286415.1	EMBL	CDS	2270141	2270659	.	+	0	ID=cds1977;Parent=gene2043;Dbxref=EnsemblGenomes-Gn:YE2074,EnsemblGenomes-Tr:CAL12147,GOA:A1JN39,InterPro:IPR001497,InterPro:IPR008332,InterPro:IPR011991,InterPro:IPR014048,InterPro:IPR023546,UniProtKB/TrEMBL:A1JN39,NCBI_GP:CAL12147.1;Name=CAL12147.1;gbkey=CDS;gene=ogt;product=putative methylated-DNA--protein-cysteine methyltransferase;protein_id=CAL12147.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2270147	2270392	.	+	.	ID=id3743;Note=Pfam match to entry PF02870 Methyltransf_1N%2C6-O-methylguanine DNA methyltransferase%2C ribonuclease-like domain%2C score 52.4%2C E-value 6.6e-13;gbkey=misc_feature;gene=ogt;inference=protein motif:PFAM:PF02870
AM286415.1	EMBL	sequence_feature	2270396	2270656	.	+	.	ID=id3744;Note=Pfam match to entry PF01035 Methyltransf_1%2C6-O-methylguanine DNA methyltransferase%2C DNA binding domain%2C score 173.1%2C E-value 3.1e-49;gbkey=misc_feature;gene=ogt;inference=protein motif:PFAM:PF01035
AM286415.1	EMBL	sequence_feature	2270549	2270569	.	+	.	ID=id3745;Note=PS00374 Methylated-DNA--protein-cysteine methyltransferase active site.;gbkey=misc_feature;gene=ogt;inference=protein motif:Prosite:PS00374
AM286415.1	EMBL	gene	2270732	2271487	.	+	.	ID=gene2044;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;gene_synonym=nirR;locus_tag=YE2075
AM286415.1	EMBL	CDS	2270732	2271487	.	+	0	ID=cds1978;Parent=gene2044;Dbxref=EnsemblGenomes-Gn:YE2075,EnsemblGenomes-Tr:CAL12148,GOA:A1JN42,InterPro:IPR000595,InterPro:IPR001808,InterPro:IPR011991,InterPro:IPR012318,InterPro:IPR014710,InterPro:IPR018335,InterPro:IPR018490,UniProtKB/TrEMBL:A1JN42,NCBI_GP:CAL12148.1;Name=CAL12148.1;gbkey=CDS;gene=fnr;product=fumarate and nitrate reduction regulatory protein;protein_id=CAL12148.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2270867	2271145	.	+	.	ID=id3746;Note=Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain%2C score 80.3%2C E-value 2.5e-21;gbkey=misc_feature;gene=fnr;inference=protein motif:PFAM:PF00027
AM286415.1	EMBL	sequence_feature	2271308	2271403	.	+	.	ID=id3747;Note=Pfam match to entry PF00325 crp%2C Bacterial regulatory proteins%2C crp family%2C score 54.2%2C E-value 1.8e-13;gbkey=misc_feature;gene=fnr;inference=protein motif:PFAM:PF00325
AM286415.1	EMBL	sequence_feature	2271314	2271385	.	+	.	ID=id3748;Note=PS00042 Bacterial regulatory proteins%2C crp family signature.;gbkey=misc_feature;gene=fnr;inference=protein motif:Prosite:PS00042
AM286415.1	EMBL	sequence_feature	2271314	2271379	.	+	.	ID=id3749;Note=Predicted helix-turn-helix motif with score 1841.000%2C SD 5.46 at aa 195-216%2C sequence MTRGDIGNYLGLTVETISRLLG;gbkey=misc_feature;gene=fnr
AM286415.1	EMBL	gene	2271724	2272680	.	+	.	ID=gene2045;Name=YE2076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2076
AM286415.1	EMBL	CDS	2271724	2272680	.	+	0	ID=cds1979;Parent=gene2045;Dbxref=EnsemblGenomes-Gn:YE2076,EnsemblGenomes-Tr:CAL12149,GOA:A1JN44,InterPro:IPR006016,InterPro:IPR014729,UniProtKB/TrEMBL:A1JN44,NCBI_GP:CAL12149.1;Name=CAL12149.1;gbkey=CDS;product=putative stress protein;protein_id=CAL12149.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2271730	2272161	.	+	.	ID=id3750;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 61.9%2C E-value 9e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00582
AM286415.1	EMBL	sequence_feature	2272177	2272623	.	+	.	ID=id3751;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 74.5%2C E-value 1.4e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00582
AM286415.1	EMBL	gene	2272919	2274310	.	-	.	ID=gene2046;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=YE2077
AM286415.1	EMBL	CDS	2272919	2274310	.	-	0	ID=cds1980;Parent=gene2046;Dbxref=EnsemblGenomes-Gn:YE2077,EnsemblGenomes-Tr:CAL12150,GOA:A1JN46,InterPro:IPR012136,InterPro:IPR029035,UniProtKB/TrEMBL:A1JN46,NCBI_GP:CAL12150.1;Name=CAL12150.1;gbkey=CDS;gene=pntB;product=NAD(P) transhydrogenase subunit beta;protein_id=CAL12150.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2272922	2274301	.	-	.	ID=id3752;Note=Pfam match to entry PF02233 PNTB%2C NAD(P) transhydrogenase beta subunit%2C score 1124.1%2C E-value 0;gbkey=misc_feature;gene=pntB;inference=protein motif:PFAM:PF02233
AM286415.1	EMBL	sequence_feature	2274233	2274301	.	-	.	ID=id3753;Note=9 probable transmembrane helices predicted for YE2077 by TMHMM2.0 at aa 4-26%2C 33-52%2C 57-74%2C 87-106%2C121-143%2C 164-181%2C 186-208%2C 215-237 and 241-260;gbkey=misc_feature;gene=pntB;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	2274155	2274214	.	-	.	ID=id3753;Note=9 probable transmembrane helices predicted for YE2077 by TMHMM2.0 at aa 4-26%2C 33-52%2C 57-74%2C 87-106%2C121-143%2C 164-181%2C 186-208%2C 215-237 and 241-260;gbkey=misc_feature;gene=pntB;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	2274089	2274142	.	-	.	ID=id3753;Note=9 probable transmembrane helices predicted for YE2077 by TMHMM2.0 at aa 4-26%2C 33-52%2C 57-74%2C 87-106%2C121-143%2C 164-181%2C 186-208%2C 215-237 and 241-260;gbkey=misc_feature;gene=pntB;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	2273993	2274052	.	-	.	ID=id3753;Note=9 probable transmembrane helices predicted for YE2077 by TMHMM2.0 at aa 4-26%2C 33-52%2C 57-74%2C 87-106%2C121-143%2C 164-181%2C 186-208%2C 215-237 and 241-260;gbkey=misc_feature;gene=pntB;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	2273882	2273950	.	-	.	ID=id3753;Note=9 probable transmembrane helices predicted for YE2077 by TMHMM2.0 at aa 4-26%2C 33-52%2C 57-74%2C 87-106%2C121-143%2C 164-181%2C 186-208%2C 215-237 and 241-260;gbkey=misc_feature;gene=pntB;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	2273768	2273821	.	-	.	ID=id3753;Note=9 probable transmembrane helices predicted for YE2077 by TMHMM2.0 at aa 4-26%2C 33-52%2C 57-74%2C 87-106%2C121-143%2C 164-181%2C 186-208%2C 215-237 and 241-260;gbkey=misc_feature;gene=pntB;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	2273687	2273755	.	-	.	ID=id3753;Note=9 probable transmembrane helices predicted for YE2077 by TMHMM2.0 at aa 4-26%2C 33-52%2C 57-74%2C 87-106%2C121-143%2C 164-181%2C 186-208%2C 215-237 and 241-260;gbkey=misc_feature;gene=pntB;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	2273600	2273668	.	-	.	ID=id3753;Note=9 probable transmembrane helices predicted for YE2077 by TMHMM2.0 at aa 4-26%2C 33-52%2C 57-74%2C 87-106%2C121-143%2C 164-181%2C 186-208%2C 215-237 and 241-260;gbkey=misc_feature;gene=pntB;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	2273531	2273590	.	-	.	ID=id3753;Note=9 probable transmembrane helices predicted for YE2077 by TMHMM2.0 at aa 4-26%2C 33-52%2C 57-74%2C 87-106%2C121-143%2C 164-181%2C 186-208%2C 215-237 and 241-260;gbkey=misc_feature;gene=pntB;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	2274431	2275957	.	-	.	ID=gene2047;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=YE2078
AM286415.1	EMBL	CDS	2274431	2275957	.	-	0	ID=cds1981;Parent=gene2047;Dbxref=EnsemblGenomes-Gn:YE2078,EnsemblGenomes-Tr:CAL12151,GOA:A1JN48,InterPro:IPR007698,InterPro:IPR007886,InterPro:IPR008142,InterPro:IPR008143,InterPro:IPR016040,InterPro:IPR024605,InterPro:IPR026255,UniProtKB/TrEMBL:A1JN48,NCBI_GP:CAL12151.1;Name=CAL12151.1;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase alpha subunit;protein_id=CAL12151.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2275385	2275453	.	-	.	ID=id3754;Note=5 probable transmembrane helices predicted for YE2078 by TMHMM2.0 at aa 169-191%2C 401-418%2C 422-444%2C451-470 and 475-497;gbkey=misc_feature;gene=pntA;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2274704	2274757	.	-	.	ID=id3754;Note=5 probable transmembrane helices predicted for YE2078 by TMHMM2.0 at aa 169-191%2C 401-418%2C 422-444%2C451-470 and 475-497;gbkey=misc_feature;gene=pntA;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2274626	2274694	.	-	.	ID=id3754;Note=5 probable transmembrane helices predicted for YE2078 by TMHMM2.0 at aa 169-191%2C 401-418%2C 422-444%2C451-470 and 475-497;gbkey=misc_feature;gene=pntA;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2274548	2274607	.	-	.	ID=id3754;Note=5 probable transmembrane helices predicted for YE2078 by TMHMM2.0 at aa 169-191%2C 401-418%2C 422-444%2C451-470 and 475-497;gbkey=misc_feature;gene=pntA;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2274467	2274535	.	-	.	ID=id3754;Note=5 probable transmembrane helices predicted for YE2078 by TMHMM2.0 at aa 169-191%2C 401-418%2C 422-444%2C451-470 and 475-497;gbkey=misc_feature;gene=pntA;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	2274659	2274691	.	-	.	ID=id3755;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pntA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2274908	2275948	.	-	.	ID=id3756;Note=Pfam match to entry PF01262 AlaDh_PNT%2C Alanine dehydrogenase/pyridine nucleotide transhydrogenase%2C score 282.5%2C E-value 3.4e-82;gbkey=misc_feature;gene=pntA;inference=protein motif:PFAM:PF01262
AM286415.1	EMBL	sequence_feature	2275373	2275450	.	-	.	ID=id3757;Note=PS00837 Alanine dehydrogenase %26 pyridine nucleotide transhydrogenase signature 2.;gbkey=misc_feature;gene=pntA;inference=protein motif:Prosite:PS00837
AM286415.1	EMBL	sequence_feature	2275868	2275948	.	-	.	ID=id3758;Note=PS00836 Alanine dehydrogenase %26 pyridine nucleotide transhydrogenase signature 1.;gbkey=misc_feature;gene=pntA;inference=protein motif:Prosite:PS00836
AM286415.1	EMBL	gene	2276049	2276228	.	-	.	ID=gene2048;Name=YE2079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2079
AM286415.1	EMBL	CDS	2276049	2276228	.	-	0	ID=cds1982;Parent=gene2048;Dbxref=EnsemblGenomes-Gn:YE2079,EnsemblGenomes-Tr:CAL12152,UniProtKB/TrEMBL:A1JN50,NCBI_GP:CAL12152.1;Name=CAL12152.1;Note=Note the differing N-termini compared to other Yersinia orthologues;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12152.1;transl_table=11
AM286415.1	EMBL	gene	2276490	2277443	.	+	.	ID=gene2049;Name=YE2080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2080
AM286415.1	EMBL	CDS	2276490	2277443	.	+	0	ID=cds1983;Parent=gene2049;Dbxref=EnsemblGenomes-Gn:YE2080,EnsemblGenomes-Tr:CAL12153,InterPro:IPR010854,InterPro:IPR025539,InterPro:IPR025543,UniProtKB/TrEMBL:A1JN51,NCBI_GP:CAL12153.1;Name=CAL12153.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12153.1;transl_table=11
AM286415.1	EMBL	gene	2277894	2279285	.	+	.	ID=gene2050;Name=YE2081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2081
AM286415.1	EMBL	CDS	2277894	2279285	.	+	0	ID=cds1984;Parent=gene2050;Dbxref=EnsemblGenomes-Gn:YE2081,EnsemblGenomes-Tr:CAL12154,GOA:A1JN52,InterPro:IPR002293,InterPro:IPR004754,UniProtKB/TrEMBL:A1JN52,NCBI_GP:CAL12154.1;Name=CAL12154.1;gbkey=CDS;product=putative amino acid antiporter;protein_id=CAL12154.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2277894	2279183	.	+	.	ID=id3759;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -261.5%2C E-value 0.0035;gbkey=misc_feature;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	2277906	2277974	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	2278002	2278070	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	2278161	2278229	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	2278272	2278340	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	2278374	2278442	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	2278500	2278559	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	2278596	2278664	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	2278722	2278790	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	2278893	2278952	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	2278965	2279033	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	2279052	2279111	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	2279121	2279180	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	2279217	2279276	.	+	.	ID=id3760;Note=13 probable transmembrane helices predicted for YE2081 by TMHMM2.0 at aa 5-27%2C 37-59%2C 90-112%2C 127-149%2C161-183%2C 203-222%2C 235-257%2C 277-299%2C 334-353%2C 358-380%2C387-406%2C 410-429 and 442-461;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	gene	2279356	2279772	.	-	.	ID=gene2051;Name=YE2082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2082
AM286415.1	EMBL	CDS	2279356	2279772	.	-	0	ID=cds1985;Parent=gene2051;Dbxref=EnsemblGenomes-Gn:YE2082,EnsemblGenomes-Tr:CAL12155,UniProtKB/TrEMBL:A1JN54,NCBI_GP:CAL12155.1;Name=CAL12155.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12155.1;transl_table=11
AM286415.1	EMBL	gene	2280015	2280743	.	+	.	ID=gene2052;Name=rstA;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;gene_synonym=urpT;locus_tag=YE2083
AM286415.1	EMBL	CDS	2280015	2280743	.	+	0	ID=cds1986;Parent=gene2052;Dbxref=EnsemblGenomes-Gn:YE2083,EnsemblGenomes-Tr:CAL12156,GOA:A1JN55,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR003018,InterPro:IPR011006,InterPro:IPR011991,UniProtKB/TrEMBL:A1JN55,NCBI_GP:CAL12156.1;Name=CAL12156.1;gbkey=CDS;gene=rstA;product=two-component regulatory system%2C response regulator protein;protein_id=CAL12156.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2280018	2280374	.	+	.	ID=id3761;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 91.6%2C E-value 9.9e-25;gbkey=misc_feature;gene=rstA;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	2280483	2280701	.	+	.	ID=id3762;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 72.4%2C E-value 6.1e-19;gbkey=misc_feature;gene=rstA;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	gene	2280770	2282047	.	+	.	ID=gene2053;Name=rstB;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;gene_synonym=uspT;locus_tag=YE2084
AM286415.1	EMBL	CDS	2280770	2282047	.	+	0	ID=cds1987;Parent=gene2053;Dbxref=EnsemblGenomes-Gn:YE2084,EnsemblGenomes-Tr:CAL12157,GOA:A1JN56,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB/TrEMBL:A1JN56,NCBI_GP:CAL12157.1;Name=CAL12157.1;gbkey=CDS;gene=rstB;product=two-component regulatory system%2C sensor kinase protein;protein_id=CAL12157.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2281151	2281360	.	+	.	ID=id3763;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 40.6%2C E-value 2.4e-09;gbkey=misc_feature;gene=rstB;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	2281154	2281207	.	+	.	ID=id3764;Note=1 probable transmembrane helix predicted for YE2084 by TMHMM2.0 at aa 129-146;gbkey=misc_feature;gene=rstB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	2281370	2281552	.	+	.	ID=id3765;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 33.7%2C E-value 2.8e-07;gbkey=misc_feature;gene=rstB;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	2281682	2282011	.	+	.	ID=id3766;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 134.9%2C E-value 9.6e-38;gbkey=misc_feature;gene=rstB;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	2282083	2283576	.	+	.	ID=gene2054;Name=YE2085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2085
AM286415.1	EMBL	CDS	2282083	2283576	.	+	0	ID=cds1988;Parent=gene2054;Dbxref=EnsemblGenomes-Gn:YE2085,EnsemblGenomes-Tr:CAL12158,GOA:A1JN64,InterPro:IPR001333,UniProtKB/TrEMBL:A1JN64,NCBI_GP:CAL12158.1;Name=CAL12158.1;gbkey=CDS;product=putative carboxypeptidase;protein_id=CAL12158.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2282089	2283570	.	+	.	ID=id3767;Note=Pfam match to entry PF02074 Peptidase_M32%2CCarboxypeptidase Taq (M32) metallopeptidase%2C score 462.2%2CE-value 2.8e-136;gbkey=misc_feature;inference=protein motif:PFAM:PF02074
AM286415.1	EMBL	gene	2283966	2284241	.	+	.	ID=gene2055;Name=asr;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=YE2086
AM286415.1	EMBL	CDS	2283966	2284241	.	+	0	ID=cds1989;Parent=gene2055;Dbxref=EnsemblGenomes-Gn:YE2086,EnsemblGenomes-Tr:CAL12159,UniProtKB/TrEMBL:A1JN70,NCBI_GP:CAL12159.1;Name=CAL12159.1;gbkey=CDS;gene=asr;product=putative acid shock protein;protein_id=CAL12159.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2283978	2284046	.	+	.	ID=id3768;Note=1 probable transmembrane helix predicted for YE2086 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;gene=asr;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2284642	2285484	.	+	.	ID=gene2056;Name=YE2087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2087
AM286415.1	EMBL	CDS	2284642	2285484	.	+	0	ID=cds1990;Parent=gene2056;Dbxref=EnsemblGenomes-Gn:YE2087,EnsemblGenomes-Tr:CAL12160,GOA:A1JN76,InterPro:IPR001254,InterPro:IPR008256,InterPro:IPR009003,InterPro:IPR018114,UniProtKB/TrEMBL:A1JN76,NCBI_GP:CAL12160.1;Name=CAL12160.1;Note=Similar to many including: Yersinia pestis putative peptidase Ypo2319 SWALL:Q8ZE64 (EMBL:AJ414152) (278 aa) fasta scores: E(): 5.9e-88%2C 78.72 38d in 282 aa and to Salmonella typhimurium%2C and Salmonella typhi putative protease Stm1484 or Sty1583 SWALL:Q8XG80 (EMBL:AE008764) (273 aa) fasta scores: E(): 3.4e-62%2C 58.58 38d in 268 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414152;product=possible protease;protein_id=CAL12160.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2285293	2285328	.	+	.	ID=id3769;Note=PS00135 Serine proteases%2C trypsin family%2C serine active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00135
AM286415.1	EMBL	gene	2285540	2285863	.	-	.	ID=gene2057;Name=YE2088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2088
AM286415.1	EMBL	CDS	2285540	2285863	.	-	0	ID=cds1991;Parent=gene2057;Dbxref=EnsemblGenomes-Gn:YE2088,EnsemblGenomes-Tr:CAL12161,GOA:A1JN79,InterPro:IPR001387,InterPro:IPR010982,UniProtKB/TrEMBL:A1JN79,NCBI_GP:CAL12161.1;Name=CAL12161.1;gbkey=CDS;product=putative DNA-binding phage-related protein;protein_id=CAL12161.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2285576	2285740	.	-	.	ID=id3770;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 56.5%2C E-value 3.7e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	2285648	2285713	.	-	.	ID=id3771;Note=Predicted helix-turn-helix motif with score 1868.000%2C SD 5.55 at aa 51-72%2C sequence LTQEDIARRAGLRKQNISRMEK;gbkey=misc_feature
AM286415.1	EMBL	gene	2285860	2286174	.	-	.	ID=gene2058;Name=YE2089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2089
AM286415.1	EMBL	CDS	2285860	2286174	.	-	0	ID=cds1992;Parent=gene2058;Dbxref=EnsemblGenomes-Gn:YE2089,EnsemblGenomes-Tr:CAL12162,InterPro:IPR009241,UniProtKB/TrEMBL:A1JN81,NCBI_GP:CAL12162.1;Name=CAL12162.1;gbkey=CDS;product=putative phage protein;protein_id=CAL12162.1;transl_table=11
AM286415.1	EMBL	gene	2286528	2290370	.	-	.	ID=gene2059;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=YE2090
AM286415.1	EMBL	CDS	2286528	2290370	.	-	0	ID=cds1993;Parent=gene2059;Dbxref=EnsemblGenomes-Gn:YE2090,EnsemblGenomes-Tr:CAL12163,GOA:A1JN82,InterPro:IPR001650,InterPro:IPR003593,InterPro:IPR007502,InterPro:IPR010222,InterPro:IPR011545,InterPro:IPR011709,InterPro:IPR014001,InterPro:IPR024590,InterPro:IPR027417,UniProtKB/TrEMBL:A1JN82,NCBI_GP:CAL12163.1;Name=CAL12163.1;gbkey=CDS;gene=hrpA;product=ATP-dependent helicase;protein_id=CAL12163.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2289216	2289479	.	-	.	ID=id3772;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 46.1%2C E-value 5.1e-11;gbkey=misc_feature;gene=hrpA;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	2290107	2290130	.	-	.	ID=id3773;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=hrpA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2290584	2291825	.	-	.	ID=gene2060;Name=YE2091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2091
AM286415.1	EMBL	CDS	2290584	2291825	.	-	0	ID=cds1994;Parent=gene2060;Dbxref=EnsemblGenomes-Gn:YE2091,EnsemblGenomes-Tr:CAL12164,InterPro:IPR008430,InterPro:IPR011324,UniProtKB/TrEMBL:A1JN83,NCBI_GP:CAL12164.1;Name=CAL12164.1;Note=Similar in parts to Escherichia coli cytotoxic necrotizing factor type 2 Cnf2 SWALL:Q47107 (EMBL:U01097) (1014 aa) fasta scores: E(): 5.8e-10%2C 24.55 38d in 281 aa and to Yersinia pseudotuberculosis cytotoxic necrotizing factor Cnf SWALL:Q9EYH7 (EMBL:AF324349) (1014 aa) fasta scores: E(): 3.5e-08%2C 24.9 38d in 273 aa;gbkey=CDS;inference=similar to sequence:INSDC:U01097;product=hypothetical protein;protein_id=CAL12164.1;transl_table=11
AM286415.1	EMBL	gene	2292282	2292887	.	+	.	ID=gene2061;Name=acpD;gbkey=Gene;gene=acpD;gene_biotype=protein_coding;locus_tag=YE2092
AM286415.1	EMBL	CDS	2292282	2292887	.	+	0	ID=cds1995;Parent=gene2061;Dbxref=EnsemblGenomes-Gn:YE2092,EnsemblGenomes-Tr:CAL12165,GOA:A1JN84,InterPro:IPR003680,InterPro:IPR023048,InterPro:IPR029039,NCBI_GP:CAL12165.1;Name=CAL12165.1;gbkey=CDS;gene=acpD;product=acyl carrier protein phosphodiesterase;protein_id=CAL12165.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2292285	2292869	.	+	.	ID=id3774;Note=Pfam match to entry PF02525 Flavodoxin_2%2CFlavodoxin-like fold%2C score 180.4%2C E-value 2e-51;gbkey=misc_feature;gene=acpD;inference=protein motif:PFAM:PF02525
AM286415.1	EMBL	pseudogene	2293157	2293387	.	-	.	ID=gene2062;Name=YE2094;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE2094;pseudo=true
AM286415.1	EMBL	CDS	2293157	2293387	.	-	0	ID=cds1996;Parent=gene2062;Note=This CDS appears to be a gene fragment which is highly similar to the very C-terminus of Yersinia pestis putative transcriptional regulatory protein Ypo2324 SWALL:Q8ZE59 (EMBL:AJ414152) (318 aa) fasta scores: E(): 1.1e-19%2C 78.48 38d in 79 aa and to Yersinia pestis KIM putative transcriptional regulator Y2009 SWALL:AAM85575 (EMBL:AE013803) (318 aa) fasta scores: E(): 1.1e-19%2C78.48 38d in 79 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414152;product=putative transcriptional regulatory protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	2293453	2293824	.	-	.	ID=gene2063;Name=YE2095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2095
AM286415.1	EMBL	CDS	2293453	2293824	.	-	0	ID=cds1997;Parent=gene2063;Dbxref=EnsemblGenomes-Gn:YE2095,EnsemblGenomes-Tr:CAL12167,InterPro:IPR008309,UniProtKB/TrEMBL:A1JN86,NCBI_GP:CAL12167.1;Name=CAL12167.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12167.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2293714	2293782	.	-	.	ID=id3775;Note=1 probable transmembrane helix predicted for YE2095 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2293834	2294019	.	-	.	ID=gene2064;Name=YE2096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2096
AM286415.1	EMBL	CDS	2293834	2294019	.	-	0	ID=cds1998;Parent=gene2064;Dbxref=EnsemblGenomes-Gn:YE2096,EnsemblGenomes-Tr:CAL12168,InterPro:IPR025985,UniProtKB/TrEMBL:A1JN88,NCBI_GP:CAL12168.1;Name=CAL12168.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL12168.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2293966	2293998	.	-	.	ID=id3776;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2294025	2296658	.	-	.	ID=gene2065;Name=YE2097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2097
AM286415.1	EMBL	CDS	2294025	2296658	.	-	0	ID=cds1999;Parent=gene2065;Dbxref=EnsemblGenomes-Gn:YE2097,EnsemblGenomes-Tr:CAL12169,InterPro:IPR021730,UniProtKB/TrEMBL:A1JN91,NCBI_GP:CAL12169.1;Name=CAL12169.1;Note=Similar to many proteins of undefined function including: Escherichia coli hypothetical protein YdbH or b1381 SWALL:YDBH_ECOLI (SWALL:P52645) (879 aa) fasta scores: E(): 4.9e-167%2C 46.46 38d in 876 aa and to Yersinia pestis putative membrane protein Ypo2328 SWALL:Q8ZE56 (EMBL:AJ414152) (898 aa) fasta scores: E(): 0%2C 80.11 38d in 875 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P52645;product=conserved hypothetical protein;protein_id=CAL12169.1;transl_table=11
AM286415.1	EMBL	gene	2296932	2297924	.	+	.	ID=gene2066;Name=ldhA;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;gene_synonym=hslI,htpH;locus_tag=YE2098
AM286415.1	EMBL	CDS	2296932	2297924	.	+	0	ID=cds2000;Parent=gene2066;Dbxref=EnsemblGenomes-Gn:YE2098,EnsemblGenomes-Tr:CAL12170,GOA:A1JN94,InterPro:IPR006139,InterPro:IPR006140,InterPro:IPR016040,InterPro:IPR029752,InterPro:IPR029753,UniProtKB/TrEMBL:A1JN94,NCBI_GP:CAL12170.1;Name=CAL12170.1;gbkey=CDS;gene=ldhA;product=D-lactate dehydrogenase;protein_id=CAL12170.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2296938	2297228	.	+	.	ID=id3777;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain %2Cscore 105.0%2C E-value 9.8e-29;gbkey=misc_feature;gene=ldhA;inference=protein motif:PFAM:PF00389
AM286415.1	EMBL	sequence_feature	2297232	2297816	.	+	.	ID=id3778;Note=Pfam match to entry PF02826 2-Hacid_DH_C%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain %2Cscore 331.1%2C E-value 8.1e-97;gbkey=misc_feature;gene=ldhA;inference=protein motif:PFAM:PF02826
AM286415.1	EMBL	sequence_feature	2297370	2297453	.	+	.	ID=id3779;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;gbkey=misc_feature;gene=ldhA;inference=protein motif:Prosite:PS00065
AM286415.1	EMBL	sequence_feature	2297511	2297579	.	+	.	ID=id3780;Note=PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2.;gbkey=misc_feature;gene=ldhA;inference=protein motif:Prosite:PS00670
AM286415.1	EMBL	sequence_feature	2297598	2297648	.	+	.	ID=id3781;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;gbkey=misc_feature;gene=ldhA;inference=protein motif:Prosite:PS00671
AM286415.1	EMBL	gene	2298056	2298373	.	-	.	ID=gene2067;Name=YE2099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2099
AM286415.1	EMBL	CDS	2298056	2298373	.	-	0	ID=cds2001;Parent=gene2067;Dbxref=EnsemblGenomes-Gn:YE2099,EnsemblGenomes-Tr:CAL12171,InterPro:IPR005590,UniProtKB/TrEMBL:A1JNA1,NCBI_GP:CAL12171.1;Name=CAL12171.1;Note=Similar to Yersinia pestis putative lipoprotein Ypo2331 SWALL:Q8ZE53 (EMBL:AJ414152) (113 aa) fasta scores: E(): 2.7e-21%2C 58.4 38d in 113 aa and to Escherichia coli hypothetical protein YdbJ precursor ydbj or b1378.1 SWALL:YDBJ_ECOLI (SWALL:P52646) (88 aa) fasta scores: E(): 1.6e-09%2C 40.95 38d in 105 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P52646;product=putative lipoprotein;protein_id=CAL12171.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2298068	2298211	.	-	.	ID=id3782;Note=Pfam match to entry PF03891 DUF333%2C Domain of unknown function (DUF333)%2C score 53.0%2C E-value 2.3e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF03891
AM286415.1	EMBL	gene	2298612	2299271	.	+	.	ID=gene2068;Name=YE2100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2100
AM286415.1	EMBL	CDS	2298612	2299271	.	+	0	ID=cds2002;Parent=gene2068;Dbxref=EnsemblGenomes-Gn:YE2100,EnsemblGenomes-Tr:CAL12172,GOA:A1JNA5,InterPro:IPR003416,UniProtKB/TrEMBL:A1JNA5,NCBI_GP:CAL12172.1;Name=CAL12172.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12172.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2298636	2299040	.	+	.	ID=id3783;Note=Pfam match to entry PF02308 MgtC%2C MgtC family %2Cscore 207.5%2C E-value 1.4e-59;gbkey=misc_feature;inference=protein motif:PFAM:PF02308
AM286415.1	EMBL	sequence_feature	2298702	2298770	.	+	.	ID=id3784;Note=3 probable transmembrane helices predicted for YE2100 by TMHMM2.0 at aa 31-53%2C 68-87 and 108-130;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2298813	2298872	.	+	.	ID=id3784;Note=3 probable transmembrane helices predicted for YE2100 by TMHMM2.0 at aa 31-53%2C 68-87 and 108-130;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2298933	2299001	.	+	.	ID=id3784;Note=3 probable transmembrane helices predicted for YE2100 by TMHMM2.0 at aa 31-53%2C 68-87 and 108-130;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	2299380	2299712	.	-	.	ID=gene2069;Name=qacE;gbkey=Gene;gene=qacE;gene_biotype=protein_coding;locus_tag=YE2101
AM286415.1	EMBL	CDS	2299380	2299712	.	-	0	ID=cds2003;Parent=gene2069;Dbxref=EnsemblGenomes-Gn:YE2101,EnsemblGenomes-Tr:CAL12173,GOA:A1JNA7,InterPro:IPR000390,UniProtKB/TrEMBL:A1JNA7,NCBI_GP:CAL12173.1;Name=CAL12173.1;gbkey=CDS;gene=qacE;product=quaternary ammonium compound-resistance protein;protein_id=CAL12173.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2299566	2299634	.	-	.	ID=id3785;Note=3 probable transmembrane helices predicted for YE2101 by TMHMM2.0 at aa 27-49%2C 56-78 and 83-105;gbkey=misc_feature;gene=qacE;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2299479	2299547	.	-	.	ID=id3785;Note=3 probable transmembrane helices predicted for YE2101 by TMHMM2.0 at aa 27-49%2C 56-78 and 83-105;gbkey=misc_feature;gene=qacE;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2299398	2299466	.	-	.	ID=id3785;Note=3 probable transmembrane helices predicted for YE2101 by TMHMM2.0 at aa 27-49%2C 56-78 and 83-105;gbkey=misc_feature;gene=qacE;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	2299431	2299709	.	-	.	ID=id3786;Note=Pfam match to entry PF00893 DUF7%2C Integral membrane protein DUF7%2C score 130.9%2C E-value 1.5e-36;gbkey=misc_feature;gene=qacE;inference=protein motif:PFAM:PF00893
AM286415.1	EMBL	gene	2300090	2303623	.	+	.	ID=gene2070;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=YE2102
AM286415.1	EMBL	CDS	2300090	2303623	.	+	0	ID=cds2004;Parent=gene2070;Dbxref=EnsemblGenomes-Gn:YE2102,EnsemblGenomes-Tr:CAL12174,GOA:A1JNA8,InterPro:IPR001450,InterPro:IPR002869,InterPro:IPR002880,InterPro:IPR009014,InterPro:IPR011766,InterPro:IPR011895,InterPro:IPR017896,InterPro:IPR017900,InterPro:IPR019456,InterPro:IPR019752,InterPro:IPR029061,UniProtKB/TrEMBL:A1JNA8,NCBI_GP:CAL12174.1;Name=CAL12174.1;gbkey=CDS;gene=nifJ;product=putative pyruvate-flavodoxin oxidoreductase;protein_id=CAL12174.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2300123	2300821	.	+	.	ID=id3787;Note=Pfam match to entry PF01855 POR_N%2C Pyruvate flavodoxin/ferredoxin oxidoreductase%2C thiamine diP-binding domain%2C score 416.3%2C E-value 1.8e-122;gbkey=misc_feature;gene=nifJ;inference=protein motif:PFAM:PF01855
AM286415.1	EMBL	sequence_feature	2301365	2301919	.	+	.	ID=id3788;Note=Pfam match to entry PF01558 POR%2C Pyruvate ferredoxin/flavodoxin oxidoreductase%2C score 244.5%2CE-value 9.4e-71;gbkey=misc_feature;gene=nifJ;inference=protein motif:PFAM:PF01558
AM286415.1	EMBL	sequence_feature	2301641	2301688	.	+	.	ID=id3789;Note=PS00024 Hemopexin domain signature.;gbkey=misc_feature;gene=nifJ;inference=protein motif:Prosite:PS00024
AM286415.1	EMBL	sequence_feature	2302133	2302204	.	+	.	ID=id3790;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 30.8%2C E-value 2.1e-06;gbkey=misc_feature;gene=nifJ;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	2302154	2302189	.	+	.	ID=id3791;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=nifJ;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	2302301	2302372	.	+	.	ID=id3792;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 21.6%2C E-value 7.3e-05;gbkey=misc_feature;gene=nifJ;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	2302322	2302357	.	+	.	ID=id3793;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=nifJ;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	2303703	2305058	.	-	.	ID=gene2071;Name=arbB;gbkey=Gene;gene=arbB;gene_biotype=protein_coding;locus_tag=YE2103
AM286415.1	EMBL	CDS	2303703	2305058	.	-	0	ID=cds2005;Parent=gene2071;Dbxref=EnsemblGenomes-Gn:YE2103,EnsemblGenomes-Tr:CAL12175,GOA:A1JNB7,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,InterPro:IPR018120,UniProtKB/TrEMBL:A1JNB7,NCBI_GP:CAL12175.1;Name=CAL12175.1;Note=Similar to Bacillus subtilis beta-glucosidase BglH or n17D SWALL:BGL1_BACSU (SWALL:P40740) (469 aa) fasta scores: E(): 3.5e-110%2C 63.01 38d in 411 aa and to Leishmania infantum 6-phospho-beta-glucosidase-like protein ArbB SWALL:Q9GPU3 (EMBL:AF309637) (467 aa) fasta scores: E(): 5.2e-98%2C 57.77 38d in 431 aa. Note the differing N-termini of the Bacillus and Yersinia predicted products.;gbkey=CDS;gene=arbB;inference=similar to sequence:UniProtKB:P40740;product=beta-glucosidase;protein_id=CAL12175.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2303706	2305034	.	-	.	ID=id3794;Note=Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1%2C score 375.3%2C E-value 4e-110;gbkey=misc_feature;gene=arbB;inference=protein motif:PFAM:PF00232
AM286415.1	EMBL	sequence_feature	2303997	2304023	.	-	.	ID=id3795;Note=PS00572 Glycosyl hydrolases family 1 active site.;gbkey=misc_feature;gene=arbB;inference=protein motif:Prosite:PS00572
AM286415.1	EMBL	gene	2305196	2307097	.	-	.	ID=gene2072;Name=arbF;gbkey=Gene;gene=arbF;gene_biotype=protein_coding;locus_tag=YE2104
AM286415.1	EMBL	CDS	2305196	2307097	.	-	0	ID=cds2006;Parent=gene2072;Dbxref=EnsemblGenomes-Gn:YE2104,EnsemblGenomes-Tr:CAL12176,GOA:A1JNC1,InterPro:IPR001127,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR011055,InterPro:IPR011297,InterPro:IPR013013,InterPro:IPR018113,UniProtKB/TrEMBL:A1JNC1,NCBI_GP:CAL12176.1;Name=CAL12176.1;Note=Similar to Erwinia chrysanthemi PTS system%2Cbeta-glucoside-specific IIabc component ArbF SWALL:PTBA_ERWCH (SWALL:P26207) (631 aa) fasta scores: E(): 6.4e-81%2C 37.44 38d in 633 aa and to Escherichia coli pts system%2C beta-glucoside-specific IIabc component BglF or BglC or BglS or b3722 SWALL:PTBA_ECOLI (SWALL:P08722) (625 aa) fasta scores: E(): 1.4e-79%2C 39.3 38d in 636 aa;gbkey=CDS;gene=arbF;inference=similar to sequence:UniProtKB:P26207;product=PTS system beta-glucoside-specific IIabc component;protein_id=CAL12176.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2305286	2305600	.	-	.	ID=id3796;Note=Pfam match to entry PF00358 PTS_EIIA_1%2Cphosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 1%2C score 207.4%2C E-value 1.5e-59;gbkey=misc_feature;gene=arbF;inference=protein motif:PFAM:PF00358
AM286415.1	EMBL	sequence_feature	2305424	2305462	.	-	.	ID=id3797;Note=PS00371 PTS EIIA domains phosphorylation site signature 1.;gbkey=misc_feature;gene=arbF;inference=protein motif:Prosite:PS00371
AM286415.1	EMBL	sequence_feature	2306696	2306764	.	-	.	ID=id3798;Note=10 probable transmembrane helices predicted for YE2104 by TMHMM2.0 at aa 112-134%2C 149-168%2C 173-195%2C205-227%2C 248-270%2C 290-312%2C 319-341%2C 356-378%2C 390-412 and 427-449;gbkey=misc_feature;gene=arbF;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	2306594	2306653	.	-	.	ID=id3798;Note=10 probable transmembrane helices predicted for YE2104 by TMHMM2.0 at aa 112-134%2C 149-168%2C 173-195%2C205-227%2C 248-270%2C 290-312%2C 319-341%2C 356-378%2C 390-412 and 427-449;gbkey=misc_feature;gene=arbF;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	2306513	2306581	.	-	.	ID=id3798;Note=10 probable transmembrane helices predicted for YE2104 by TMHMM2.0 at aa 112-134%2C 149-168%2C 173-195%2C205-227%2C 248-270%2C 290-312%2C 319-341%2C 356-378%2C 390-412 and 427-449;gbkey=misc_feature;gene=arbF;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	2306417	2306485	.	-	.	ID=id3798;Note=10 probable transmembrane helices predicted for YE2104 by TMHMM2.0 at aa 112-134%2C 149-168%2C 173-195%2C205-227%2C 248-270%2C 290-312%2C 319-341%2C 356-378%2C 390-412 and 427-449;gbkey=misc_feature;gene=arbF;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	2306288	2306356	.	-	.	ID=id3798;Note=10 probable transmembrane helices predicted for YE2104 by TMHMM2.0 at aa 112-134%2C 149-168%2C 173-195%2C205-227%2C 248-270%2C 290-312%2C 319-341%2C 356-378%2C 390-412 and 427-449;gbkey=misc_feature;gene=arbF;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	2306162	2306230	.	-	.	ID=id3798;Note=10 probable transmembrane helices predicted for YE2104 by TMHMM2.0 at aa 112-134%2C 149-168%2C 173-195%2C205-227%2C 248-270%2C 290-312%2C 319-341%2C 356-378%2C 390-412 and 427-449;gbkey=misc_feature;gene=arbF;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	2306075	2306143	.	-	.	ID=id3798;Note=10 probable transmembrane helices predicted for YE2104 by TMHMM2.0 at aa 112-134%2C 149-168%2C 173-195%2C205-227%2C 248-270%2C 290-312%2C 319-341%2C 356-378%2C 390-412 and 427-449;gbkey=misc_feature;gene=arbF;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	2305964	2306032	.	-	.	ID=id3798;Note=10 probable transmembrane helices predicted for YE2104 by TMHMM2.0 at aa 112-134%2C 149-168%2C 173-195%2C205-227%2C 248-270%2C 290-312%2C 319-341%2C 356-378%2C 390-412 and 427-449;gbkey=misc_feature;gene=arbF;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	2305862	2305930	.	-	.	ID=id3798;Note=10 probable transmembrane helices predicted for YE2104 by TMHMM2.0 at aa 112-134%2C 149-168%2C 173-195%2C205-227%2C 248-270%2C 290-312%2C 319-341%2C 356-378%2C 390-412 and 427-449;gbkey=misc_feature;gene=arbF;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	2305751	2305819	.	-	.	ID=id3798;Note=10 probable transmembrane helices predicted for YE2104 by TMHMM2.0 at aa 112-134%2C 149-168%2C 173-195%2C205-227%2C 248-270%2C 290-312%2C 319-341%2C 356-378%2C 390-412 and 427-449;gbkey=misc_feature;gene=arbF;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	2305919	2306770	.	-	.	ID=id3799;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 94.7%2C E-value 1.2e-25;gbkey=misc_feature;gene=arbF;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	sequence_feature	2306591	2306623	.	-	.	ID=id3800;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=arbF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2306972	2307076	.	-	.	ID=id3801;Note=Pfam match to entry PF00367 PTS_EIIB%2Cphosphotransferase system%2C EIIB%2C score 65.7%2C E-value 6.3e-17;gbkey=misc_feature;gene=arbF;inference=protein motif:PFAM:PF00367
AM286415.1	EMBL	sequence_feature	2306987	2307040	.	-	.	ID=id3802;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;gene=arbF;inference=protein motif:Prosite:PS01035
AM286415.1	EMBL	gene	2307182	2308015	.	-	.	ID=gene2073;Name=arbG;gbkey=Gene;gene=arbG;gene_biotype=protein_coding;locus_tag=YE2105
AM286415.1	EMBL	CDS	2307182	2308015	.	-	0	ID=cds2007;Parent=gene2073;Dbxref=EnsemblGenomes-Gn:YE2105,EnsemblGenomes-Tr:CAL12177,GOA:A1JND6,InterPro:IPR004341,InterPro:IPR011608,UniProtKB/TrEMBL:A1JND6,NCBI_GP:CAL12177.1;Name=CAL12177.1;Note=Similar to Erwinia chrysanthemi beta-glucoside operon antiterminator ArbG SWALL:ARBG_ERWCH (SWALL:P26211) (283 aa) fasta scores: E(): 1.9e-47%2C 49.27 38d in 274 aa and to Bacillus subtilis transcription antiterminator LicT or n15A SWALL:LICT_BACSU (SWALL:P39805) (277 aa) fasta scores: E(): 6.7e-49%2C 49.08 38d in 273 aa;gbkey=CDS;gene=arbG;inference=similar to sequence:UniProtKB:P39805;product=beta-glucoside operon antiterminator;protein_id=CAL12177.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2307197	2307493	.	-	.	ID=id3803;Note=Pfam match to entry PF00874 PRD%2C PRD domain%2C score 100.7%2C E-value 1.9e-27;gbkey=misc_feature;gene=arbG;inference=protein motif:PFAM:PF00874
AM286415.1	EMBL	sequence_feature	2307527	2307814	.	-	.	ID=id3804;Note=Pfam match to entry PF00874 PRD%2C PRD domain%2C score 100.1%2C E-value 2.8e-27;gbkey=misc_feature;gene=arbG;inference=protein motif:PFAM:PF00874
AM286415.1	EMBL	sequence_feature	2307839	2308024	.	-	.	ID=id3805;Note=Pfam match to entry PF03123 CAT_RBD%2C CAT RNA binding domain%2C score 81.2%2C E-value 1.4e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF03123
AM286415.1	EMBL	gene	2308324	2309265	.	+	.	ID=gene2074;Name=YE2106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2106
AM286415.1	EMBL	CDS	2308324	2309265	.	+	0	ID=cds2008;Parent=gene2074;Dbxref=EnsemblGenomes-Gn:YE2106,EnsemblGenomes-Tr:CAL12178,GOA:A1JND8,InterPro:IPR011063,InterPro:IPR012089,InterPro:IPR014729,NCBI_GP:CAL12178.1;Name=CAL12178.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12178.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2308324	2309184	.	+	.	ID=id3806;Note=Pfam match to entry PF01171 UPF0021%2CUncharacterized protein family UPF0021%2C score -52.8%2CE-value 7e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01171
AM286415.1	EMBL	gene	2309579	2310562	.	-	.	ID=gene2075;Name=YE2107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2107
AM286415.1	EMBL	CDS	2309579	2310562	.	-	0	ID=cds2009;Parent=gene2075;Dbxref=EnsemblGenomes-Gn:YE2107,EnsemblGenomes-Tr:CAL12179,GOA:A1JNE0,InterPro:IPR002523,InterPro:IPR023714,NCBI_GP:CAL12179.1;Name=CAL12179.1;gbkey=CDS;product=CorA-like Mg2+ transporter protein;protein_id=CAL12179.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2309582	2310460	.	-	.	ID=id3807;Note=Pfam match to entry PF01544 CorA%2C CorA-like Mg2+ transporter protein%2C score 17.2%2C E-value 8.2e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF01544
AM286415.1	EMBL	sequence_feature	2309681	2309749	.	-	.	ID=id3808;Note=2 probable transmembrane helices predicted for YE2107 by TMHMM2.0 at aa 272-294 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2309600	2309668	.	-	.	ID=id3808;Note=2 probable transmembrane helices predicted for YE2107 by TMHMM2.0 at aa 272-294 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2311500	2313116	.	-	.	ID=gene2076;Name=mppA;gbkey=Gene;gene=mppA;gene_biotype=protein_coding;locus_tag=YE2110
AM286415.1	EMBL	CDS	2311500	2313116	.	-	0	ID=cds2010;Parent=gene2076;Dbxref=EnsemblGenomes-Gn:YE2110,EnsemblGenomes-Tr:CAL12180,GOA:A1JNE1,InterPro:IPR000914,InterPro:IPR023765,UniProtKB/TrEMBL:A1JNE1,NCBI_GP:CAL12180.1;Name=CAL12180.1;gbkey=CDS;gene=mppA;product=putative periplasmic murein peptide-binding protein;protein_id=CAL12180.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2311512	2313098	.	-	.	ID=id3809;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 524.5%2C E-value 5.1e-155;gbkey=misc_feature;gene=mppA;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	sequence_feature	2312805	2312870	.	-	.	ID=id3810;Note=PS01040 Bacterial extracellular solute-binding proteins%2C family 5 signature.;gbkey=misc_feature;gene=mppA;inference=protein motif:Prosite:PS01040
AM286415.1	EMBL	gene	2313263	2313970	.	+	.	ID=gene2077;Name=YE2111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2111
AM286415.1	EMBL	CDS	2313263	2313970	.	+	0	ID=cds2011;Parent=gene2077;Dbxref=EnsemblGenomes-Gn:YE2111,EnsemblGenomes-Tr:CAL12181,GOA:A1JNE3,InterPro:IPR000834,UniProtKB/TrEMBL:A1JNE3,NCBI_GP:CAL12181.1;Name=CAL12181.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12181.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2313299	2313367	.	+	.	ID=id3811;Note=1 probable transmembrane helix predicted for YE2111 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2313967	2314938	.	-	.	ID=gene2078;Name=YE2112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2112
AM286415.1	EMBL	CDS	2313967	2314938	.	-	0	ID=cds2012;Parent=gene2078;Dbxref=EnsemblGenomes-Gn:YE2112,EnsemblGenomes-Tr:CAL12182,GOA:A1JNE4,InterPro:IPR001354,InterPro:IPR013341,InterPro:IPR013342,InterPro:IPR018110,InterPro:IPR029017,InterPro:IPR029065,UniProtKB/TrEMBL:A1JNE4,NCBI_GP:CAL12182.1;Name=CAL12182.1;gbkey=CDS;product=putative mandelate racemase / muconate lactonizing protein;protein_id=CAL12182.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2313970	2314599	.	-	.	ID=id3812;Note=Pfam match to entry PF01188 MR_MLE%2C Mandelate racemase / muconate lactonizing enzyme%2C C-terminal domain%2C score 172.2%2C E-value 5.6e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF01188
AM286415.1	EMBL	sequence_feature	2314327	2314422	.	-	.	ID=id3813;Note=PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00909
AM286415.1	EMBL	sequence_feature	2314603	2314938	.	-	.	ID=id3814;Note=Pfam match to entry PF02746 MR_MLE_N%2C Mandelate racemase / muconate lactonizing enzyme%2C N-terminal domain%2C score 55.4%2C E-value 7.8e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF02746
AM286415.1	EMBL	gene	2315091	2315594	.	+	.	ID=gene2079;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=YE2113
AM286415.1	EMBL	CDS	2315091	2315594	.	+	0	ID=cds2013;Parent=gene2079;Dbxref=EnsemblGenomes-Gn:YE2113,EnsemblGenomes-Tr:CAL12183,GOA:A1JNE8,InterPro:IPR002065,InterPro:IPR012336,InterPro:IPR013740,InterPro:IPR018219,UniProtKB/TrEMBL:A1JNE8,NCBI_GP:CAL12183.1;Name=CAL12183.1;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=CAL12183.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2315151	2315585	.	+	.	ID=id3815;Note=Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family%2C score 118.1%2C E-value 1.1e-32;gbkey=misc_feature;gene=tpx;inference=protein motif:PFAM:PF00578
AM286415.1	EMBL	sequence_feature	2315340	2315375	.	+	.	ID=id3816;Note=PS01265 Tpx family signature.;gbkey=misc_feature;gene=tpx;inference=protein motif:Prosite:PS01265
AM286415.1	EMBL	gene	2315717	2317294	.	-	.	ID=gene2080;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=YE2114
AM286415.1	EMBL	CDS	2315717	2317294	.	-	0	ID=cds2014;Parent=gene2080;Dbxref=EnsemblGenomes-Gn:YE2114,EnsemblGenomes-Tr:CAL12184,GOA:A1JNF5,InterPro:IPR000014,InterPro:IPR002078,InterPro:IPR002912,InterPro:IPR003593,InterPro:IPR009057,InterPro:IPR013767,InterPro:IPR025662,InterPro:IPR025943,InterPro:IPR025944,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNF5,NCBI_GP:CAL12184.1;Name=CAL12184.1;gbkey=CDS;gene=tyrR;product=transcriptional regulatory protein;protein_id=CAL12184.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2315771	2315836	.	-	.	ID=id3817;Note=Predicted helix-turn-helix motif with score 1684.000%2C SD 4.92 at aa 487-508%2C sequence PSTRKLAKRLGVSHTAIANKLR;gbkey=misc_feature;gene=tyrR
AM286415.1	EMBL	sequence_feature	2316011	2316040	.	-	.	ID=id3818;Note=PS00688 Sigma-54 interaction domain C-terminal part signature.;gbkey=misc_feature;gene=tyrR;inference=protein motif:Prosite:PS00688
AM286415.1	EMBL	sequence_feature	2316014	2316679	.	-	.	ID=id3819;Note=Pfam match to entry PF00158 Sigma54_activat%2CSigma-54 interaction domain%2C score 440.4%2C E-value 1e-129;gbkey=misc_feature;gene=tyrR;inference=protein motif:PFAM:PF00158
AM286415.1	EMBL	sequence_feature	2316374	2316421	.	-	.	ID=id3820;Note=PS00676 Sigma-54 interaction domain ATP-binding region B signature.;gbkey=misc_feature;gene=tyrR;inference=protein motif:Prosite:PS00676
AM286415.1	EMBL	sequence_feature	2316566	2316607	.	-	.	ID=id3821;Note=PS00675 Sigma-54 interaction domain ATP-binding region A signature.;gbkey=misc_feature;gene=tyrR;inference=protein motif:Prosite:PS00675
AM286415.1	EMBL	sequence_feature	2316863	2317057	.	-	.	ID=id3822;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 36.0%2C E-value 5.5e-08;gbkey=misc_feature;gene=tyrR;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	2317085	2317294	.	-	.	ID=id3823;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 26.2%2C E-value 5.1e-05;gbkey=misc_feature;gene=tyrR;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	gene	2317614	2318060	.	+	.	ID=gene2081;Name=YE2115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2115
AM286415.1	EMBL	CDS	2317614	2318060	.	+	0	ID=cds2015;Parent=gene2081;Dbxref=EnsemblGenomes-Gn:YE2115,EnsemblGenomes-Tr:CAL12185,InterPro:IPR011979,InterPro:IPR024467,UniProtKB/TrEMBL:A1JNG6,NCBI_GP:CAL12185.1;Name=CAL12185.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12185.1;transl_table=11
AM286415.1	EMBL	gene	2318124	2318582	.	+	.	ID=gene2082;Name=YE2116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2116
AM286415.1	EMBL	CDS	2318124	2318582	.	+	0	ID=cds2016;Parent=gene2082;Dbxref=EnsemblGenomes-Gn:YE2116,EnsemblGenomes-Tr:CAL12186,InterPro:IPR014914,UniProtKB/TrEMBL:A1JNH0,NCBI_GP:CAL12186.1;Name=CAL12186.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12186.1;transl_table=11
AM286415.1	EMBL	gene	2318585	2319649	.	-	.	ID=gene2083;Name=YE2117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2117
AM286415.1	EMBL	CDS	2318585	2319649	.	-	0	ID=cds2017;Parent=gene2083;Dbxref=EnsemblGenomes-Gn:YE2117,EnsemblGenomes-Tr:CAL12187,GOA:A1JNH2,InterPro:IPR006507,InterPro:IPR021147,NCBI_GP:CAL12187.1;Name=CAL12187.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12187.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2319380	2319439	.	-	.	ID=id3824;Note=3 probable transmembrane helices predicted for YE2117 by TMHMM2.0 at aa 71-90%2C 100-122 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2319284	2319352	.	-	.	ID=id3824;Note=3 probable transmembrane helices predicted for YE2117 by TMHMM2.0 at aa 71-90%2C 100-122 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2318948	2319016	.	-	.	ID=id3824;Note=3 probable transmembrane helices predicted for YE2117 by TMHMM2.0 at aa 71-90%2C 100-122 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	2319646	2321043	.	-	.	ID=gene2084;Name=YE2118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2118
AM286415.1	EMBL	CDS	2319646	2321043	.	-	0	ID=cds2018;Parent=gene2084;Dbxref=EnsemblGenomes-Gn:YE2118,EnsemblGenomes-Tr:CAL12188,InterPro:IPR007413,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNH4,NCBI_GP:CAL12188.1;Name=CAL12188.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12188.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2320945	2320968	.	-	.	ID=id3825;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2321024	2321263	.	-	.	ID=gene2085;Name=YE2118A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2118A
AM286415.1	EMBL	CDS	2321024	2321263	.	-	0	ID=cds2019;Parent=gene2085;Dbxref=EnsemblGenomes-Gn:YE2118A,EnsemblGenomes-Tr:CCP19179,InterPro:IPR014321,UniProtKB/TrEMBL:K8FC79,NCBI_GP:CCP19179.1;Name=CCP19179.1;gbkey=CDS;product=phage shock protein D;protein_id=CCP19179.1;transl_table=11
AM286415.1	EMBL	gene	2321309	2321659	.	-	.	ID=gene2086;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=YE2119
AM286415.1	EMBL	CDS	2321309	2321659	.	-	0	ID=cds2020;Parent=gene2086;Dbxref=EnsemblGenomes-Gn:YE2119,EnsemblGenomes-Tr:CAL12189,InterPro:IPR007168,InterPro:IPR014320,UniProtKB/TrEMBL:A1JNI2,NCBI_GP:CAL12189.1;Name=CAL12189.1;gbkey=CDS;gene=pspC;product=phage shock protein C;protein_id=CAL12189.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2321480	2321548	.	-	.	ID=id3826;Note=1 probable transmembrane helix predicted for YE2119 by TMHMM2.0 at aa 38-60;gbkey=misc_feature;gene=pspC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2321728	2321955	.	-	.	ID=gene2087;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=YE2120
AM286415.1	EMBL	CDS	2321728	2321955	.	-	0	ID=cds2021;Parent=gene2087;Dbxref=EnsemblGenomes-Gn:YE2120,EnsemblGenomes-Tr:CAL12190,GOA:A1JNI6,InterPro:IPR009554,UniProtKB/TrEMBL:A1JNI6,NCBI_GP:CAL12190.1;Name=CAL12190.1;gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=CAL12190.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2321878	2321946	.	-	.	ID=id3827;Note=1 probable transmembrane helix predicted for YE2120 by TMHMM2.0 at aa 4-26;gbkey=misc_feature;gene=pspB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2322117	2322782	.	-	.	ID=gene2088;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=YE2121
AM286415.1	EMBL	CDS	2322117	2322782	.	-	0	ID=cds2022;Parent=gene2088;Dbxref=EnsemblGenomes-Gn:YE2121,EnsemblGenomes-Tr:CAL12191,InterPro:IPR007157,InterPro:IPR014319,UniProtKB/TrEMBL:A1JNJ0,NCBI_GP:CAL12191.1;Name=CAL12191.1;gbkey=CDS;gene=pspA;product=phage shock protein A;protein_id=CAL12191.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2322129	2322779	.	-	.	ID=id3828;Note=Pfam match to entry PF04012 PspA_IM30%2C PspA/IM30 family%2C score 166.5%2C E-value 2.9e-47;gbkey=misc_feature;gene=pspA;inference=protein motif:PFAM:PF04012
AM286415.1	EMBL	gene	2322972	2323991	.	+	.	ID=gene2089;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=YE2122
AM286415.1	EMBL	CDS	2322972	2323991	.	+	0	ID=cds2023;Parent=gene2089;Dbxref=EnsemblGenomes-Gn:YE2122,EnsemblGenomes-Tr:CAL12192,GOA:A1JNJ4,InterPro:IPR002078,InterPro:IPR002197,InterPro:IPR003593,InterPro:IPR009057,InterPro:IPR014317,InterPro:IPR025943,InterPro:IPR025944,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNJ4,NCBI_GP:CAL12192.1;Name=CAL12192.1;gbkey=CDS;gene=pspF;product=psp operon transcriptional activator;protein_id=CAL12192.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2322993	2323661	.	+	.	ID=id3829;Note=Pfam match to entry PF00158 Sigma54_activat%2CSigma-54 interaction domain%2C score 357.2%2C E-value 1.1e-104;gbkey=misc_feature;gene=pspF;inference=protein motif:PFAM:PF00158
AM286415.1	EMBL	sequence_feature	2323251	2323298	.	+	.	ID=id3830;Note=PS00676 Sigma-54 interaction domain ATP-binding region B signature.;gbkey=misc_feature;gene=pspF;inference=protein motif:Prosite:PS00676
AM286415.1	EMBL	sequence_feature	2323635	2323664	.	+	.	ID=id3831;Note=PS00688 Sigma-54 interaction domain C-terminal part signature.;gbkey=misc_feature;gene=pspF;inference=protein motif:Prosite:PS00688
AM286415.1	EMBL	sequence_feature	2323836	2323958	.	+	.	ID=id3832;Note=Pfam match to entry PF02954 HTH_8%2C Bacterial regulatory protein%2C Fis family%2C score 33.7%2C E-value 2.8e-07;gbkey=misc_feature;gene=pspF;inference=protein motif:PFAM:PF02954
AM286415.1	EMBL	sequence_feature	2323887	2323952	.	+	.	ID=id3833;Note=Predicted helix-turn-helix motif with score 1288.000%2C SD 3.57 at aa 306-327%2C sequence FNQRKAASLLGLTYHQLRGMLK;gbkey=misc_feature;gene=pspF
AM286415.1	EMBL	gene	2324044	2324400	.	-	.	ID=gene2090;Name=ytxB;gbkey=Gene;gene=ytxB;gene_biotype=protein_coding;locus_tag=YE2123
AM286415.1	EMBL	CDS	2324044	2324400	.	-	0	ID=cds2024;Parent=gene2090;Dbxref=EnsemblGenomes-Gn:YE2123,EnsemblGenomes-Tr:CAL12193,UniProtKB/TrEMBL:A1JNK0,NCBI_GP:CAL12193.1;Name=CAL12193.1;Note=Previously sequenced as: Yersinia enterocolitica YtxB precursor SWALL:Q93M75 (EMBL:AY008264) (118 aa) fasta scores: E(): 1e-47%2C 100 38d in 118 aa. This CDS is possibly an enterotoxin subunit.;gbkey=CDS;gene=ytxB;inference=similar to sequence:INSDC:AY008264;product=putative lipoprotein;protein_id=CAL12193.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2324353	2324385	.	-	.	ID=id3834;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ytxB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2324449	2325276	.	-	.	ID=gene2091;Name=ytxA;gbkey=Gene;gene=ytxA;gene_biotype=protein_coding;locus_tag=YE2124
AM286415.1	EMBL	CDS	2324449	2325276	.	-	0	ID=cds2025;Parent=gene2091;Dbxref=EnsemblGenomes-Gn:YE2124,EnsemblGenomes-Tr:CAL12194,GOA:A1JNM5,InterPro:IPR003898,UniProtKB/TrEMBL:A1JNM5,NCBI_GP:CAL12194.1;Name=CAL12194.1;Note=Previously sequenced as: Yersinia enterocolitica YtxA precursor SWALL:Q93M76 (EMBL:AY008264) (275 aa) fasta scores: E(): 8.6e-116%2C 100 38d in 275 aa. Also weakly similar to Bordetella pertussis pertussis toxin subunit 1 precursor PtxA SWALL:TOX1_BORPE (SWALL:P04977) (269 aa) fasta scores: E(): 6.5e-14%2C 33.48 38d in 221 aa;gbkey=CDS;gene=ytxA;inference=similar to sequence:UniProtKB:P04977;product=putative enterotoxin subunit;protein_id=CAL12194.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2325028	2325210	.	-	.	ID=id3835;Note=Pfam match to entry PF02917 Pertussis_S1%2C Pertussis toxin%2C subunit 1%2C score 31.9%2C E-value 4.3e-10;gbkey=misc_feature;gene=ytxA;inference=protein motif:PFAM:PF02917
AM286415.1	EMBL	signal_peptide	2325211	2325312	.	-	.	ID=id3836;Note=Signal peptide predicted for YE2124 by SignalP 2.0 HMM (Signal peptide probabilty 0.653) with cleavage site probability 0.652 between residues 34 and 35;gbkey=sig_peptide
AM286415.1	EMBL	transcript	2325478	2325580	.	-	.	ID=rna86;Note=RyhB RNA (RF00057) as predicted by Rfam%2C score 49.64%2C positions 1 to 97;gbkey=misc_RNA
AM286415.1	EMBL	exon	2325478	2325580	.	-	.	ID=id3837;Parent=rna86;Note=RyhB RNA (RF00057) as predicted by Rfam%2C score 49.64%2C positions 1 to 97;gbkey=misc_RNA
AM286415.1	EMBL	gene	2326034	2327707	.	+	.	ID=gene2092;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=YE2125
AM286415.1	EMBL	CDS	2326034	2327707	.	+	0	ID=cds2026;Parent=gene2092;Dbxref=EnsemblGenomes-Gn:YE2125,EnsemblGenomes-Tr:CAL12195,GOA:A1JNN0,InterPro:IPR000914,InterPro:IPR023765,UniProtKB/TrEMBL:A1JNN0,NCBI_GP:CAL12195.1;Name=CAL12195.1;gbkey=CDS;gene=sapA;product=peptide transport periplasmic protein precursor;protein_id=CAL12195.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2326211	2327674	.	+	.	ID=id3838;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 685.6%2C E-value 1.6e-203;gbkey=misc_feature;gene=sapA;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	sequence_feature	2326310	2326378	.	+	.	ID=id3839;Note=PS01040 Bacterial extracellular solute-binding proteins%2C family 5 signature.;gbkey=misc_feature;gene=sapA;inference=protein motif:Prosite:PS01040
AM286415.1	EMBL	sequence_feature	2327159	2327230	.	+	.	ID=id3840;Note=PS00027 'Homeobox' domain signature.;gbkey=misc_feature;gene=sapA;inference=protein motif:Prosite:PS00027
AM286415.1	EMBL	gene	2327704	2328669	.	+	.	ID=gene2093;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=YE2126
AM286415.1	EMBL	CDS	2327704	2328669	.	+	0	ID=cds2027;Parent=gene2093;Dbxref=EnsemblGenomes-Gn:YE2126,EnsemblGenomes-Tr:CAL12196,GOA:A1JNN3,InterPro:IPR000515,UniProtKB/TrEMBL:A1JNN3,NCBI_GP:CAL12196.1;Name=CAL12196.1;gbkey=CDS;gene=sapB;product=peptide transport system permease protein;protein_id=CAL12196.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2327728	2327796	.	+	.	ID=id3841;Note=5 probable transmembrane helices predicted for YE2126 by TMHMM2.0 at aa 9-31%2C 80-102%2C 114-136%2C 179-201 and 283-305;gbkey=misc_feature;gene=sapB;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2327941	2328009	.	+	.	ID=id3841;Note=5 probable transmembrane helices predicted for YE2126 by TMHMM2.0 at aa 9-31%2C 80-102%2C 114-136%2C 179-201 and 283-305;gbkey=misc_feature;gene=sapB;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2328043	2328111	.	+	.	ID=id3841;Note=5 probable transmembrane helices predicted for YE2126 by TMHMM2.0 at aa 9-31%2C 80-102%2C 114-136%2C 179-201 and 283-305;gbkey=misc_feature;gene=sapB;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2328238	2328306	.	+	.	ID=id3841;Note=5 probable transmembrane helices predicted for YE2126 by TMHMM2.0 at aa 9-31%2C 80-102%2C 114-136%2C 179-201 and 283-305;gbkey=misc_feature;gene=sapB;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2328550	2328618	.	+	.	ID=id3841;Note=5 probable transmembrane helices predicted for YE2126 by TMHMM2.0 at aa 9-31%2C 80-102%2C 114-136%2C 179-201 and 283-305;gbkey=misc_feature;gene=sapB;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	2328319	2328552	.	+	.	ID=id3842;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 52.9%2C E-value 4.7e-13;gbkey=misc_feature;gene=sapB;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	2328656	2329546	.	+	.	ID=gene2094;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=YE2127
AM286415.1	EMBL	CDS	2328656	2329546	.	+	0	ID=cds2028;Parent=gene2094;Dbxref=EnsemblGenomes-Gn:YE2127,EnsemblGenomes-Tr:CAL12197,GOA:A1JNN9,InterPro:IPR000515,InterPro:IPR025966,UniProtKB/TrEMBL:A1JNN9,NCBI_GP:CAL12197.1;Name=CAL12197.1;gbkey=CDS;gene=sapC;product=peptide transport system permease protein;protein_id=CAL12197.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2328746	2328814	.	+	.	ID=id3843;Note=6 probable transmembrane helices predicted for YE2127 by TMHMM2.0 at aa 31-53%2C 100-122%2C 134-156%2C 198-217%2C224-246 and 261-283;gbkey=misc_feature;gene=sapC;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2328953	2329021	.	+	.	ID=id3843;Note=6 probable transmembrane helices predicted for YE2127 by TMHMM2.0 at aa 31-53%2C 100-122%2C 134-156%2C 198-217%2C224-246 and 261-283;gbkey=misc_feature;gene=sapC;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2329055	2329123	.	+	.	ID=id3843;Note=6 probable transmembrane helices predicted for YE2127 by TMHMM2.0 at aa 31-53%2C 100-122%2C 134-156%2C 198-217%2C224-246 and 261-283;gbkey=misc_feature;gene=sapC;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2329247	2329306	.	+	.	ID=id3843;Note=6 probable transmembrane helices predicted for YE2127 by TMHMM2.0 at aa 31-53%2C 100-122%2C 134-156%2C 198-217%2C224-246 and 261-283;gbkey=misc_feature;gene=sapC;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2329325	2329393	.	+	.	ID=id3843;Note=6 probable transmembrane helices predicted for YE2127 by TMHMM2.0 at aa 31-53%2C 100-122%2C 134-156%2C 198-217%2C224-246 and 261-283;gbkey=misc_feature;gene=sapC;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2329436	2329504	.	+	.	ID=id3843;Note=6 probable transmembrane helices predicted for YE2127 by TMHMM2.0 at aa 31-53%2C 100-122%2C 134-156%2C 198-217%2C224-246 and 261-283;gbkey=misc_feature;gene=sapC;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	2329196	2329426	.	+	.	ID=id3844;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 33.3%2C E-value 3.8e-07;gbkey=misc_feature;gene=sapC;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	2329546	2330538	.	+	.	ID=gene2095;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=YE2128
AM286415.1	EMBL	CDS	2329546	2330538	.	+	0	ID=cds2029;Parent=gene2095;Dbxref=EnsemblGenomes-Gn:YE2128,EnsemblGenomes-Tr:CAL12198,GOA:A1JNP3,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010066,InterPro:IPR013563,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNP3,NCBI_GP:CAL12198.1;Name=CAL12198.1;gbkey=CDS;gene=sapD;product=peptide transport system ATP-binding protein;protein_id=CAL12198.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2329642	2330250	.	+	.	ID=id3845;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 216.8%2C E-value 2.1e-62;gbkey=misc_feature;gene=sapD;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2329663	2329686	.	+	.	ID=id3846;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=sapD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2330538	2331353	.	+	.	ID=gene2096;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=YE2129
AM286415.1	EMBL	CDS	2330538	2331353	.	+	0	ID=cds2030;Parent=gene2096;Dbxref=EnsemblGenomes-Gn:YE2129,EnsemblGenomes-Tr:CAL12199,GOA:A1JNQ0,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNQ0,NCBI_GP:CAL12199.1;Name=CAL12199.1;gbkey=CDS;gene=sapF;product=peptide transport system ATP-binding protein;protein_id=CAL12199.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2330655	2331218	.	+	.	ID=id3847;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 220.0%2C E-value 2.3e-63;gbkey=misc_feature;gene=sapF;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2330676	2330699	.	+	.	ID=id3848;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=sapF;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2330988	2331032	.	+	.	ID=id3849;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=sapF;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	2331499	2331741	.	+	.	ID=gene2097;Name=YE2130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2130
AM286415.1	EMBL	CDS	2331499	2331741	.	+	0	ID=cds2031;Parent=gene2097;Dbxref=EnsemblGenomes-Gn:YE2130,EnsemblGenomes-Tr:CAL12200,UniProtKB/TrEMBL:A1JNR0,NCBI_GP:CAL12200.1;Name=CAL12200.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12200.1;transl_table=11
AM286415.1	EMBL	gene	2331753	2332964	.	+	.	ID=gene2098;Name=YE2131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2131
AM286415.1	EMBL	CDS	2331753	2332964	.	+	0	ID=cds2032;Parent=gene2098;Dbxref=EnsemblGenomes-Gn:YE2131,EnsemblGenomes-Tr:CAL12201,InterPro:IPR029032,UniProtKB/TrEMBL:A1JNR3,NCBI_GP:CAL12201.1;Name=CAL12201.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12201.1;transl_table=11
AM286415.1	EMBL	gene	2333007	2333891	.	-	.	ID=gene2099;Name=YE2132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2132
AM286415.1	EMBL	CDS	2333007	2333891	.	-	0	ID=cds2033;Parent=gene2099;Dbxref=EnsemblGenomes-Gn:YE2132,EnsemblGenomes-Tr:CAL12202,GOA:A1JNR6,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JNR6,NCBI_GP:CAL12202.1;Name=CAL12202.1;Note=Similar to Erwinia carotovora hydrogen peroxide-inducible genes activator OxyR SWALL:OXYR_ERWCA (SWALL:P71318) (302 aa) fasta scores: E(): 7.9e-13%2C 28.13 id in 295 aa and to Pseudomonas aeruginosa probable transcriptional regulator Pa5179 SWALL:Q9HU10 (EMBL:AE004931) (293 aa) fasta scores: E(): 4.4e-37%2C39.59 38d in 293 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P71318;product=LysR-family transcriptional regulatory protein;protein_id=CAL12202.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2333013	2333636	.	-	.	ID=id3850;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 96.4%2C E-value 3.7e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	2333706	2333885	.	-	.	ID=id3851;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 65.5%2C E-value 7.3e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2333751	2333843	.	-	.	ID=id3852;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	2333781	2333846	.	-	.	ID=id3853;Note=Predicted helix-turn-helix motif with score 1297.000%2C SD 3.60 at aa 16-37%2C sequence RHFGRAAEASFVSQPTLSMRLK;gbkey=misc_feature
AM286415.1	EMBL	gene	2334496	2335962	.	+	.	ID=gene2100;Name=YE2133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2133
AM286415.1	EMBL	CDS	2334496	2335962	.	+	0	ID=cds2034;Parent=gene2100;Dbxref=EnsemblGenomes-Gn:YE2133,EnsemblGenomes-Tr:CAL12203,GOA:A1JNS1,InterPro:IPR000109,InterPro:IPR005279,InterPro:IPR016196,InterPro:IPR018456,InterPro:IPR023517,UniProtKB/TrEMBL:A1JNS1,NCBI_GP:CAL12203.1;Name=CAL12203.1;gbkey=CDS;product=putative proton dependent peptide transporter;protein_id=CAL12203.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2334520	2334588	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	2334631	2334699	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	2334724	2334777	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	2334790	2334849	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	2334910	2334978	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	2334988	2335056	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	2335117	2335173	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	2335183	2335242	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	2335279	2335332	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	2335417	2335476	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	2335513	2335578	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	2335621	2335689	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	2335708	2335776	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	2335819	2335887	.	+	.	ID=id3854;Note=14 probable transmembrane helices predicted for YE2133 by TMHMM2.0 at aa 9-31%2C 46-68%2C 77-94%2C 99-118%2C139-161%2C 165-187%2C 208-226%2C 230-249%2C 262-279%2C 308-327%2C340-361%2C 376-398%2C 405-427 and 442-464;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	sequence_feature	2334718	2335749	.	+	.	ID=id3855;Note=Pfam match to entry PF00854 PTR2%2C POT family %2Cscore 336.7%2C E-value 1.7e-98;gbkey=misc_feature;inference=protein motif:PFAM:PF00854
AM286415.1	EMBL	sequence_feature	2334910	2334948	.	+	.	ID=id3856;Note=PS01023 PTR2 family proton/oligopeptide symporters signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01023
AM286415.1	EMBL	gene	2336211	2336564	.	-	.	ID=gene2101;Name=YE2134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2134
AM286415.1	EMBL	CDS	2336211	2336564	.	-	0	ID=cds2035;Parent=gene2101;Dbxref=EnsemblGenomes-Gn:YE2134,EnsemblGenomes-Tr:CAL12204,InterPro:IPR025870,InterPro:IPR029068,UniProtKB/TrEMBL:A1JNS8,NCBI_GP:CAL12204.1;Name=CAL12204.1;Note=Similar to many proteins of unproven function inculding: Rhizobium meliloti hypothetical protein R01936 or Smc04266 SWALL:Q92P57 (EMBL:AL591789) (117 aa) fasta scores: E(): 3.3e-31%2C 69.82 38d in 116 aa%2C Agrobacterium tumefaciens glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein Atu1532 or agr_c_2825 SWALL:Q8UF67 (EMBL:AE009112) (119 aa) fasta scores: E(): 1.5e-29%2C 67.25 38d in 113 aa and to Xanthomonas campestris hypothetical protein Xcc0234 SWALL:Q8PDV1 (EMBL:AE012119) (113 aa) fasta scores: E(): 3.8e-25%2C 61.46 38d in 109 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591789;product=conserved hypothetical protein;protein_id=CAL12204.1;transl_table=11
AM286415.1	EMBL	gene	2336785	2337375	.	+	.	ID=gene2102;Name=YE2135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2135
AM286415.1	EMBL	CDS	2336785	2337375	.	+	0	ID=cds2036;Parent=gene2102;Dbxref=EnsemblGenomes-Gn:YE2135,EnsemblGenomes-Tr:CAL12205,InterPro:IPR009698,UniProtKB/TrEMBL:A1JNT1,NCBI_GP:CAL12205.1;Name=CAL12205.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12205.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2336884	2336952	.	+	.	ID=id3857;Note=5 probable transmembrane helices predicted for YE2135 by TMHMM2.0 at aa 34-56%2C 66-88%2C 109-131%2C 136-158 and 171-193;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2336980	2337048	.	+	.	ID=id3857;Note=5 probable transmembrane helices predicted for YE2135 by TMHMM2.0 at aa 34-56%2C 66-88%2C 109-131%2C 136-158 and 171-193;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2337109	2337177	.	+	.	ID=id3857;Note=5 probable transmembrane helices predicted for YE2135 by TMHMM2.0 at aa 34-56%2C 66-88%2C 109-131%2C 136-158 and 171-193;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2337190	2337258	.	+	.	ID=id3857;Note=5 probable transmembrane helices predicted for YE2135 by TMHMM2.0 at aa 34-56%2C 66-88%2C 109-131%2C 136-158 and 171-193;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2337295	2337363	.	+	.	ID=id3857;Note=5 probable transmembrane helices predicted for YE2135 by TMHMM2.0 at aa 34-56%2C 66-88%2C 109-131%2C 136-158 and 171-193;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	2337561	2337824	.	+	.	ID=gene2103;Name=YE2136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2136
AM286415.1	EMBL	CDS	2337561	2337824	.	+	0	ID=cds2037;Parent=gene2103;Dbxref=EnsemblGenomes-Gn:YE2136,EnsemblGenomes-Tr:CAL12206,InterPro:IPR020317,UniProtKB/TrEMBL:A1JNU1,NCBI_GP:CAL12206.1;Name=CAL12206.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12206.1;transl_table=11
AM286415.1	EMBL	gene	2338006	2338614	.	+	.	ID=gene2104;Name=gst;gbkey=Gene;gene=gst;gene_biotype=protein_coding;locus_tag=YE2137
AM286415.1	EMBL	CDS	2338006	2338614	.	+	0	ID=cds2038;Parent=gene2104;Dbxref=EnsemblGenomes-Gn:YE2137,EnsemblGenomes-Tr:CAL12207,GOA:A1JNU4,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012336,UniProtKB/TrEMBL:A1JNU4,NCBI_GP:CAL12207.1;Name=CAL12207.1;gbkey=CDS;gene=gst;product=glutathione S-transferase;protein_id=CAL12207.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2338006	2338230	.	+	.	ID=id3858;Note=Pfam match to entry PF02798 GST_N%2C Glutathione S-transferase%2C N-terminal domain%2C score 74.7%2C E-value 1.2e-19;gbkey=misc_feature;gene=gst;inference=protein motif:PFAM:PF02798
AM286415.1	EMBL	sequence_feature	2338258	2338572	.	+	.	ID=id3859;Note=Pfam match to entry PF00043 GST_C%2C Glutathione S-transferase%2C C-terminal domain%2C score 76.3%2C E-value 4.2e-20;gbkey=misc_feature;gene=gst;inference=protein motif:PFAM:PF00043
AM286415.1	EMBL	gene	2338666	2339526	.	-	.	ID=gene2105;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=YE2138
AM286415.1	EMBL	CDS	2338666	2339526	.	-	0	ID=cds2039;Parent=gene2105;Dbxref=EnsemblGenomes-Gn:YE2138,EnsemblGenomes-Tr:CAL12208,GOA:A1JNU8,InterPro:IPR004625,InterPro:IPR013749,InterPro:IPR023685,InterPro:IPR029056,UniProtKB/TrEMBL:A1JNU8,NCBI_GP:CAL12208.1;Name=CAL12208.1;gbkey=CDS;gene=pdxY;product=pyridoxamine kinase;protein_id=CAL12208.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2338729	2339526	.	-	.	ID=id3860;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score -71.3%2C E-value 0.028;gbkey=misc_feature;gene=pdxY;inference=protein motif:PFAM:PF00294
AM286415.1	EMBL	gene	2339601	2340875	.	-	.	ID=gene2106;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=YE2139
AM286415.1	EMBL	CDS	2339601	2340875	.	-	0	ID=cds2040;Parent=gene2106;Dbxref=EnsemblGenomes-Gn:YE2139,EnsemblGenomes-Tr:CAL12209,GOA:A1JNV3,InterPro:IPR001412,InterPro:IPR002305,InterPro:IPR002307,InterPro:IPR002942,InterPro:IPR014729,InterPro:IPR024088,InterPro:IPR024107,NCBI_GP:CAL12209.1;Name=CAL12209.1;gbkey=CDS;gene=tyrS;product=tyrosyl-tRNA synthetase;protein_id=CAL12209.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2339664	2339801	.	-	.	ID=id3861;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 31.0%2C E-value 1.7e-06;gbkey=misc_feature;gene=tyrS;inference=protein motif:PFAM:PF01479
AM286415.1	EMBL	sequence_feature	2339889	2340785	.	-	.	ID=id3862;Note=Pfam match to entry PF00579 tRNA-synt_1b%2C tRNA synthetases class I (W and Y)%2C score 435.7%2C E-value 2.7e-128;gbkey=misc_feature;gene=tyrS;inference=protein motif:PFAM:PF00579
AM286415.1	EMBL	sequence_feature	2340720	2340752	.	-	.	ID=id3863;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=tyrS;inference=protein motif:Prosite:PS00178
AM286415.1	EMBL	gene	2341125	2341778	.	-	.	ID=gene2107;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=YE2140
AM286415.1	EMBL	CDS	2341125	2341778	.	-	0	ID=cds2041;Parent=gene2107;Dbxref=EnsemblGenomes-Gn:YE2140,EnsemblGenomes-Tr:CAL12210,GOA:A1JNV9,InterPro:IPR000659,InterPro:IPR011576,InterPro:IPR012349,InterPro:IPR019576,InterPro:IPR019740,NCBI_GP:CAL12210.1;Name=CAL12210.1;gbkey=CDS;gene=pdxH;product=pyridoxamine 5'-phosphate oxidase;protein_id=CAL12210.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2341128	2341769	.	-	.	ID=id3864;Note=Pfam match to entry PF01243 Pyridox_oxidase%2CPyridoxamine 5'-phosphate oxidase%2C score 410.5%2C E-value 1e-120;gbkey=misc_feature;gene=pdxH;inference=protein motif:PFAM:PF01243
AM286415.1	EMBL	sequence_feature	2341179	2341220	.	-	.	ID=id3865;Note=PS01064 Pyridoxamine 5'-phosphate oxidase signature.;gbkey=misc_feature;gene=pdxH;inference=protein motif:Prosite:PS01064
AM286415.1	EMBL	gene	2342034	2342387	.	-	.	ID=gene2108;Name=YE2141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2141
AM286415.1	EMBL	CDS	2342034	2342387	.	-	0	ID=cds2042;Parent=gene2108;Dbxref=EnsemblGenomes-Gn:YE2141,EnsemblGenomes-Tr:CAL12211,InterPro:IPR018660,UniProtKB/TrEMBL:A1JNW5,NCBI_GP:CAL12211.1;Name=CAL12211.1;Note=Previously sequenced as: Yersinia enterocolitica hypothetical protein SWALL:YOR4_YEREN (SWALL:P28837) (101 aa) fasta scores: E(): 1.2e-37%2C 100 38d in 101 aa. Also highly similar to Yersinia pestis putative lipoprotein Ypo2371 SWALL:Q8ZE18 (EMBL:AJ414152) (104 aa) fasta scores: E(): 1.3e-24%2C 67.89 38d in 109 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P28837;product=putative lipoprotein;protein_id=CAL12211.1;transl_table=11
AM286415.1	EMBL	gene	2342443	2343555	.	-	.	ID=gene2109;Name=YE2142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2142
AM286415.1	EMBL	CDS	2342443	2343555	.	-	0	ID=cds2043;Parent=gene2109;Dbxref=EnsemblGenomes-Gn:YE2142,EnsemblGenomes-Tr:CAL12212,GOA:A1JNW9,InterPro:IPR005338,NCBI_GP:CAL12212.1;Name=CAL12212.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12212.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2342455	2343546	.	-	.	ID=id3866;Note=Pfam match to entry PF03702 UPF0075%2CUncharacterised protein family (UPF0075)%2C score 720.5%2CE-value 5.1e-214;gbkey=misc_feature;inference=protein motif:PFAM:PF03702
AM286415.1	EMBL	gene	2344000	2344467	.	+	.	ID=gene2110;Name=pcpY;gbkey=Gene;gene=pcpY;gene_biotype=protein_coding;gene_synonym=slyB;locus_tag=YE2143
AM286415.1	EMBL	CDS	2344000	2344467	.	+	0	ID=cds2044;Parent=gene2110;Dbxref=EnsemblGenomes-Gn:YE2143,EnsemblGenomes-Tr:CAL12213,GOA:A1JNX3,InterPro:IPR008816,UniProtKB/TrEMBL:A1JNX3,NCBI_GP:CAL12213.1;Name=CAL12213.1;gbkey=CDS;gene=pcpY;product=outer membrane lipoprotein;protein_id=CAL12213.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2344021	2344053	.	+	.	ID=id3867;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pcpY;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2344589	2345020	.	-	.	ID=gene2111;Name=rovA;gbkey=Gene;gene=rovA;gene_biotype=protein_coding;gene_synonym=horYe,slyA;locus_tag=YE2144
AM286415.1	EMBL	CDS	2344589	2345020	.	-	0	ID=cds2045;Parent=gene2111;Dbxref=EnsemblGenomes-Gn:YE2144,EnsemblGenomes-Tr:CAL12214,GOA:A1JNY1,InterPro:IPR000835,InterPro:IPR011991,InterPro:IPR023071,InterPro:IPR023187,NCBI_GP:CAL12214.1;Name=CAL12214.1;gbkey=CDS;gene=rovA;product=MarR-family transcriptional regulatory protein;protein_id=CAL12214.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2344622	2344936	.	-	.	ID=id3868;Note=Pfam match to entry PF01047 MarR%2C MarR family %2Cscore 99.9%2C E-value 3.2e-27;gbkey=misc_feature;gene=rovA;inference=protein motif:PFAM:PF01047
AM286415.1	EMBL	sequence_feature	2344817	2344882	.	-	.	ID=id3869;Note=Predicted helix-turn-helix motif with score 1097.000%2C SD 2.92 at aa 47-68%2C sequence QSQIQLAKAIGIEQPSLVRTLD;gbkey=misc_feature;gene=rovA
AM286415.1	EMBL	gene	2345201	2345437	.	+	.	ID=gene2112;Name=YE2145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2145
AM286415.1	EMBL	CDS	2345201	2345437	.	+	0	ID=cds2046;Parent=gene2112;Dbxref=EnsemblGenomes-Gn:YE2145,EnsemblGenomes-Tr:CAL12215,InterPro:IPR012451,UniProtKB/TrEMBL:A1JNZ1,NCBI_GP:CAL12215.1;Name=CAL12215.1;Note=Similar to several including: Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YdhI or b1643 or z2658 or ecs2352 SWALL:YDHI_ECOLI (SWALL:P76184) (78 aa) fasta scores: E(): 6e-18%2C 61.11 38d in 72 aa and to Salmonella typhimurium putative inner membrane protein YdhI or Stm1443 SWALL:Q8ZPN2 (EMBL:AE008762) (78 aa) fasta scores: E(): 7e-16%2C 58.33 38d in 72 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76184;product=putative inner membrane protein;protein_id=CAL12215.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2345243	2345320	.	+	.	ID=id3870;Note=2 probable transmembrane helices predicted for YE2145 by TMHMM2.0 at aa 15-40 and 53-75;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2345357	2345425	.	+	.	ID=id3870;Note=2 probable transmembrane helices predicted for YE2145 by TMHMM2.0 at aa 15-40 and 53-75;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2345444	2346301	.	+	.	ID=gene2113;Name=YE2146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2146
AM286415.1	EMBL	CDS	2345444	2346301	.	+	0	ID=cds2047;Parent=gene2113;Dbxref=EnsemblGenomes-Gn:YE2146,EnsemblGenomes-Tr:CAL12216,GOA:A1JNZ4,InterPro:IPR006143,UniProtKB/TrEMBL:A1JNZ4,NCBI_GP:CAL12216.1;Name=CAL12216.1;Note=Similar to several including: Salmonella typhi putative HlyD-family protein Sty1680 SWALL:Q8Z6P8 (EMBL:AL627271) (289 aa) fasta scores: E(): 3e-68%2C 60.07 id in 283 aa%2C Escherichia coli hypothetical protein YdhJ or b1644 SWALL:YDHJ_ECOLI (SWALL:P76185) (285 aa) fasta scores: E(): 1.2e-69%2C 62.19 38d in 283 aa and to Brucella melitensis fusaric acid resistance protein FusE SWALL:Q8YCJ5 (EMBL:AE009689) (285 aa) fasta scores: E(): 8.6e-41%2C 41.48 38d in 282 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76185;product=putative hlyD-family protein;protein_id=CAL12216.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2345462	2345521	.	+	.	ID=id3871;Note=1 probable transmembrane helix predicted for YE2146 by TMHMM2.0 at aa 7-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	2345570	2346289	.	+	.	ID=id3872;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 106.1%2C E-value 4.5e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	gene	2346304	2348328	.	+	.	ID=gene2114;Name=YE2147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2147
AM286415.1	EMBL	CDS	2346304	2348328	.	+	0	ID=cds2048;Parent=gene2114;Dbxref=EnsemblGenomes-Gn:YE2147,EnsemblGenomes-Tr:CAL12217,GOA:A1JP00,InterPro:IPR006726,UniProtKB/TrEMBL:A1JP00,NCBI_GP:CAL12217.1;Name=CAL12217.1;Note=Similar to many proteins of undefined function including: Salmonella typhi hypothetical protein YdhK or Sty1681 SWALL:YDHK_SALTI (SWALL:Q8Z6P7) (679 aa) fasta scores: E(): 3.1e-173%2C 60.78 38d in 663 aa and to Escherichia coli hypothetical protein YdhK or b1645 SWALL:YDHK_ECOLI (SWALL:P76186) (670 aa) fasta scores: E(): 2.4e-172%2C 61.27 38d in 661 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q8Z6P7;product=putative exported protein;protein_id=CAL12217.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2346439	2346498	.	+	.	ID=id3873;Note=8 probable transmembrane helices predicted for YE2147 by TMHMM2.0 at aa 46-65%2C 72-90%2C 94-111%2C 118-137%2C157-179%2C 362-384%2C 409-431 and 438-455;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	2346517	2346573	.	+	.	ID=id3873;Note=8 probable transmembrane helices predicted for YE2147 by TMHMM2.0 at aa 46-65%2C 72-90%2C 94-111%2C 118-137%2C157-179%2C 362-384%2C 409-431 and 438-455;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	2346583	2346636	.	+	.	ID=id3873;Note=8 probable transmembrane helices predicted for YE2147 by TMHMM2.0 at aa 46-65%2C 72-90%2C 94-111%2C 118-137%2C157-179%2C 362-384%2C 409-431 and 438-455;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	2346655	2346714	.	+	.	ID=id3873;Note=8 probable transmembrane helices predicted for YE2147 by TMHMM2.0 at aa 46-65%2C 72-90%2C 94-111%2C 118-137%2C157-179%2C 362-384%2C 409-431 and 438-455;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	2346772	2346840	.	+	.	ID=id3873;Note=8 probable transmembrane helices predicted for YE2147 by TMHMM2.0 at aa 46-65%2C 72-90%2C 94-111%2C 118-137%2C157-179%2C 362-384%2C 409-431 and 438-455;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	2347387	2347455	.	+	.	ID=id3873;Note=8 probable transmembrane helices predicted for YE2147 by TMHMM2.0 at aa 46-65%2C 72-90%2C 94-111%2C 118-137%2C157-179%2C 362-384%2C 409-431 and 438-455;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	2347528	2347596	.	+	.	ID=id3873;Note=8 probable transmembrane helices predicted for YE2147 by TMHMM2.0 at aa 46-65%2C 72-90%2C 94-111%2C 118-137%2C157-179%2C 362-384%2C 409-431 and 438-455;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	2347615	2347668	.	+	.	ID=id3873;Note=8 probable transmembrane helices predicted for YE2147 by TMHMM2.0 at aa 46-65%2C 72-90%2C 94-111%2C 118-137%2C157-179%2C 362-384%2C 409-431 and 438-455;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	2348353	2349249	.	-	.	ID=gene2115;Name=YE2148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2148
AM286415.1	EMBL	CDS	2348353	2349249	.	-	0	ID=cds2049;Parent=gene2115;Dbxref=EnsemblGenomes-Gn:YE2148,EnsemblGenomes-Tr:CAL12218,GOA:A1JP07,InterPro:IPR001395,InterPro:IPR020471,InterPro:IPR023210,UniProtKB/TrEMBL:A1JP07,NCBI_GP:CAL12218.1;Name=CAL12218.1;gbkey=CDS;product=putative aldo/keto reductase;protein_id=CAL12218.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2348365	2349228	.	-	.	ID=id3874;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 220.6%2C E-value 1.5e-63;gbkey=misc_feature;inference=protein motif:PFAM:PF00248
AM286415.1	EMBL	gene	2349386	2349625	.	-	.	ID=gene2116;Name=YE2149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2149
AM286415.1	EMBL	CDS	2349386	2349625	.	-	0	ID=cds2050;Parent=gene2116;Dbxref=EnsemblGenomes-Gn:YE2149,EnsemblGenomes-Tr:CAL12219,InterPro:IPR010710,UniProtKB/TrEMBL:A1JP12,NCBI_GP:CAL12219.1;Name=CAL12219.1;Note=Similar to the very C-terminus of Yersinia pestis hypothetical protein Ypo2376 SWALL:Q8ZE14 (EMBL:AJ414152) (121 aa) fasta scores: E(): 3.9e-29%2C 88.6 38d in 79 aa. Similar over the whole range to Salmonella typhi hypothetical protein Sty1684 SWALL:Q8Z6P4 (EMBL:AL627271) (79 aa) fasta scores: E(): 4e-23%2C 73.41 38d in 79 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627271;product=conserved hypothetical protein;protein_id=CAL12219.1;transl_table=11
AM286415.1	EMBL	gene	2349917	2351548	.	+	.	ID=gene2117;Name=YE2150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2150
AM286415.1	EMBL	CDS	2349917	2351548	.	+	0	ID=cds2051;Parent=gene2117;Dbxref=EnsemblGenomes-Gn:YE2150,EnsemblGenomes-Tr:CAL12220,GOA:A1JP15,InterPro:IPR000917,InterPro:IPR012549,InterPro:IPR017849,InterPro:IPR017850,UniProtKB/TrEMBL:A1JP15,NCBI_GP:CAL12220.1;Name=CAL12220.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12220.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2349941	2351545	.	+	.	ID=id3875;Note=Pfam match to entry PF02418 DUF146%2C Integral membrane protein of unknown function%2C score 767.6%2CE-value 3.4e-228;gbkey=misc_feature;inference=protein motif:PFAM:PF02418
AM286415.1	EMBL	sequence_feature	2349953	2350012	.	+	.	ID=id3876;Note=5 probable transmembrane helices predicted for YE2150 by TMHMM2.0 at aa 13-32%2C 47-69%2C 76-98%2C 118-140 and 152-174;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2350055	2350123	.	+	.	ID=id3876;Note=5 probable transmembrane helices predicted for YE2150 by TMHMM2.0 at aa 13-32%2C 47-69%2C 76-98%2C 118-140 and 152-174;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2350142	2350210	.	+	.	ID=id3876;Note=5 probable transmembrane helices predicted for YE2150 by TMHMM2.0 at aa 13-32%2C 47-69%2C 76-98%2C 118-140 and 152-174;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2350268	2350336	.	+	.	ID=id3876;Note=5 probable transmembrane helices predicted for YE2150 by TMHMM2.0 at aa 13-32%2C 47-69%2C 76-98%2C 118-140 and 152-174;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2350370	2350438	.	+	.	ID=id3876;Note=5 probable transmembrane helices predicted for YE2150 by TMHMM2.0 at aa 13-32%2C 47-69%2C 76-98%2C 118-140 and 152-174;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	2351671	2352273	.	+	.	ID=gene2118;Name=YE2151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2151
AM286415.1	EMBL	CDS	2351671	2352273	.	+	0	ID=cds2052;Parent=gene2118;Dbxref=EnsemblGenomes-Gn:YE2151,EnsemblGenomes-Tr:CAL12221,GOA:A1JP23,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR015893,UniProtKB/TrEMBL:A1JP23,NCBI_GP:CAL12221.1;Name=CAL12221.1;gbkey=CDS;product=TetR-family transcriptional regulatory protein;protein_id=CAL12221.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2351713	2351853	.	+	.	ID=id3877;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 38.1%2C E-value 1.3e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00440
AM286415.1	EMBL	gene	2352350	2353447	.	+	.	ID=gene2119;Name=YE2152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2152
AM286415.1	EMBL	CDS	2352350	2353447	.	+	0	ID=cds2053;Parent=gene2119;Dbxref=EnsemblGenomes-Gn:YE2152,EnsemblGenomes-Tr:CAL12222,GOA:A1JP27,InterPro:IPR001155,InterPro:IPR013785,UniProtKB/TrEMBL:A1JP27,NCBI_GP:CAL12222.1;Name=CAL12222.1;gbkey=CDS;product=NADH:flavin oxidoreductase / NADH oxidase family protein;protein_id=CAL12222.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2352362	2353381	.	+	.	ID=id3878;Note=Pfam match to entry PF00724 oxidored_FMN%2CNADH:flavin oxidoreductase / NADH oxidase family%2C score 389.8%2C E-value 1.8e-114;gbkey=misc_feature;inference=protein motif:PFAM:PF00724
AM286415.1	EMBL	gene	2353629	2354036	.	+	.	ID=gene2120;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=YE2153
AM286415.1	EMBL	CDS	2353629	2354036	.	+	0	ID=cds2054;Parent=gene2120;Dbxref=EnsemblGenomes-Gn:YE2153,EnsemblGenomes-Tr:CAL12223,GOA:A1JP30,InterPro:IPR004360,InterPro:IPR004361,InterPro:IPR018146,InterPro:IPR029068,UniProtKB/TrEMBL:A1JP30,NCBI_GP:CAL12223.1;Name=CAL12223.1;gbkey=CDS;gene=gloA;product=lactoylglutathione lyase;protein_id=CAL12223.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2353641	2353706	.	+	.	ID=id3879;Note=PS00934 Glyoxalase I signature 1.;gbkey=misc_feature;gene=gloA;inference=protein motif:Prosite:PS00934
AM286415.1	EMBL	sequence_feature	2353653	2354024	.	+	.	ID=id3880;Note=Pfam match to entry PF00903 Glyoxalase%2CGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily%2C score 149.1%2C E-value 5.1e-42;gbkey=misc_feature;gene=gloA;inference=protein motif:PFAM:PF00903
AM286415.1	EMBL	gene	2354147	2354794	.	+	.	ID=gene2121;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=YE2154
AM286415.1	EMBL	CDS	2354147	2354794	.	+	0	ID=cds2055;Parent=gene2121;Dbxref=EnsemblGenomes-Gn:YE2154,EnsemblGenomes-Tr:CAL12224,GOA:A1JP36,InterPro:IPR005987,InterPro:IPR006055,InterPro:IPR012337,InterPro:IPR013520,NCBI_GP:CAL12224.1;Name=CAL12224.1;gbkey=CDS;gene=rnt;product=ribonuclease T;protein_id=CAL12224.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2354201	2354752	.	+	.	ID=id3881;Note=Pfam match to entry PF00929 Exonuclease%2CExonuclease%2C score 149.2%2C E-value 4.7e-42;gbkey=misc_feature;gene=rnt;inference=protein motif:PFAM:PF00929
AM286415.1	EMBL	gene	2355069	2355413	.	-	.	ID=gene2122;Name=YE2155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2155
AM286415.1	EMBL	CDS	2355069	2355413	.	-	0	ID=cds2056;Parent=gene2122;Dbxref=EnsemblGenomes-Gn:YE2155,EnsemblGenomes-Tr:CAL12225,GOA:A1JP40,InterPro:IPR002109,InterPro:IPR004480,InterPro:IPR012336,InterPro:IPR014434,UniProtKB/TrEMBL:A1JP40,NCBI_GP:CAL12225.1;Name=CAL12225.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12225.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2355288	2355320	.	-	.	ID=id3882;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2355847	2356737	.	+	.	ID=gene2123;Name=YE2156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2156
AM286415.1	EMBL	CDS	2355847	2356737	.	+	0	ID=cds2057;Parent=gene2123;Dbxref=EnsemblGenomes-Gn:YE2156,EnsemblGenomes-Tr:CAL12226,InterPro:IPR000064,UniProtKB/TrEMBL:A1JP44,NCBI_GP:CAL12226.1;Name=CAL12226.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12226.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2356363	2356713	.	+	.	ID=id3883;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 194.8%2C E-value 8.5e-56;gbkey=misc_feature;inference=protein motif:PFAM:PF00877
AM286415.1	EMBL	gene	2356988	2357566	.	+	.	ID=gene2124;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=YE2157
AM286415.1	EMBL	CDS	2356988	2357566	.	+	0	ID=cds2058;Parent=gene2124;Dbxref=EnsemblGenomes-Gn:YE2157,EnsemblGenomes-Tr:CAL12227,GOA:A1JP47,InterPro:IPR001189,InterPro:IPR019831,InterPro:IPR019832,InterPro:IPR019833,UniProtKB/TrEMBL:A1JP47,NCBI_GP:CAL12227.1;Name=CAL12227.1;gbkey=CDS;gene=sodB;product=superoxide dismutase [Fe];protein_id=CAL12227.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2356988	2357233	.	+	.	ID=id3884;Note=Pfam match to entry PF00081 sodfe%2C Iron/manganese superoxide dismutases%2C alpha-hairpin domain%2C score 181.6%2CE-value 8.2e-52;gbkey=misc_feature;gene=sodB;inference=protein motif:PFAM:PF00081
AM286415.1	EMBL	sequence_feature	2357243	2357563	.	+	.	ID=id3885;Note=Pfam match to entry PF02777 sodfe_C%2C Iron/manganese superoxide dismutases%2C C-terminal domain%2C score 233.4%2CE-value 2.1e-67;gbkey=misc_feature;gene=sodB;inference=protein motif:PFAM:PF02777
AM286415.1	EMBL	sequence_feature	2357456	2357479	.	+	.	ID=id3886;Note=PS00088 Manganese and iron superoxide dismutases signature.;gbkey=misc_feature;gene=sodB;inference=protein motif:Prosite:PS00088
AM286415.1	EMBL	gene	2358092	2359117	.	+	.	ID=gene2125;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=YE2158
AM286415.1	EMBL	CDS	2358092	2359117	.	+	0	ID=cds2059;Parent=gene2125;Dbxref=EnsemblGenomes-Gn:YE2158,EnsemblGenomes-Tr:CAL12228,GOA:A1JP52,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR023588,InterPro:IPR028082,NCBI_GP:CAL12228.1;Name=CAL12228.1;gbkey=CDS;gene=purR;product=purine nucleotide synthesis repressor;protein_id=CAL12228.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2358092	2358172	.	+	.	ID=id3887;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 48.3%2C E-value 1.1e-11;gbkey=misc_feature;gene=purR;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	2358095	2358160	.	+	.	ID=id3888;Note=Predicted helix-turn-helix motif with score 2032.000%2C SD 6.11 at aa 2-23%2C sequence ATIKDVAKHAGVSTTTVSHVIN;gbkey=misc_feature;gene=purR
AM286415.1	EMBL	sequence_feature	2358101	2358157	.	+	.	ID=id3889;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=purR;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	sequence_feature	2358266	2359078	.	+	.	ID=id3890;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 93.7%2C E-value 2.4e-25;gbkey=misc_feature;gene=purR;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	2359173	2360111	.	-	.	ID=gene2126;Name=YE2159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2159
AM286415.1	EMBL	CDS	2359173	2360111	.	-	0	ID=cds2060;Parent=gene2126;Dbxref=EnsemblGenomes-Gn:YE2159,EnsemblGenomes-Tr:CAL12229,GOA:A1JP57,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JP57,NCBI_GP:CAL12229.1;Name=CAL12229.1;gbkey=CDS;product=LysR-family transcriptional regulatory protein;protein_id=CAL12229.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2359233	2359853	.	-	.	ID=id3891;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 90.5%2C E-value 2.1e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	2359923	2360102	.	-	.	ID=id3892;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 87.0%2C E-value 2.4e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2359968	2360060	.	-	.	ID=id3893;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	2359998	2360063	.	-	.	ID=id3894;Note=Predicted helix-turn-helix motif with score 1153.000%2C SD 3.11 at aa 17-38%2C sequence GSFSAAAQELHRVPSAISYTVR;gbkey=misc_feature
AM286415.1	EMBL	gene	2360403	2361620	.	+	.	ID=gene2127;Name=YE2160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2160
AM286415.1	EMBL	CDS	2360403	2361620	.	+	0	ID=cds2061;Parent=gene2127;Dbxref=EnsemblGenomes-Gn:YE2160,EnsemblGenomes-Tr:CAL12230,GOA:A1JP68,InterPro:IPR004812,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JP68,NCBI_GP:CAL12230.1;Name=CAL12230.1;gbkey=CDS;product=putative drug resistance protein;protein_id=CAL12230.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2360415	2361593	.	+	.	ID=id3895;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -99.9%2C E-value 0.00025;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	2360421	2360489	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2360517	2360585	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2360619	2360678	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2360691	2360759	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2360793	2360861	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2360874	2360942	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2361024	2361092	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2361135	2361203	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2361222	2361290	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2361300	2361368	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2361429	2361497	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2361507	2361566	.	+	.	ID=id3896;Note=12 probable transmembrane helices predicted for YE2160 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-92%2C 97-119%2C131-153%2C 158-180%2C 208-230%2C 245-267%2C 274-296%2C 300-322%2C343-365 and 369-388;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2360625	2360657	.	+	.	ID=id3897;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2361027	2361059	.	+	.	ID=id3898;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2361156	2361188	.	+	.	ID=id3899;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2361928	2363079	.	+	.	ID=gene2128;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;gene_synonym=cdfA;locus_tag=YE2161
AM286415.1	EMBL	CDS	2361928	2363079	.	+	0	ID=cds2062;Parent=gene2128;Dbxref=EnsemblGenomes-Gn:YE2161,EnsemblGenomes-Tr:CAL12231,GOA:A1JP73,InterPro:IPR003333,InterPro:IPR029063,UniProtKB/TrEMBL:A1JP73,NCBI_GP:CAL12231.1;Name=CAL12231.1;gbkey=CDS;gene=cfa;product=cyclopropane-fatty-acyl-phospholipid synthase;protein_id=CAL12231.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2362570	2363043	.	+	.	ID=id3900;Note=Pfam match to entry PF02353 CMAS%2CCyclopropane-fatty-acyl-phospholipid synthase%2C score 284.4%2C E-value 9.3e-83;gbkey=misc_feature;gene=cfa;inference=protein motif:PFAM:PF02353
AM286415.1	EMBL	gene	2363153	2363803	.	-	.	ID=gene2129;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;gene_synonym=ribC;locus_tag=YE2162
AM286415.1	EMBL	CDS	2363153	2363803	.	-	0	ID=cds2063;Parent=gene2129;Dbxref=EnsemblGenomes-Gn:YE2162,EnsemblGenomes-Tr:CAL12232,GOA:A1JP84,InterPro:IPR001783,InterPro:IPR017938,InterPro:IPR023366,InterPro:IPR026017,UniProtKB/TrEMBL:A1JP84,NCBI_GP:CAL12232.1;Name=CAL12232.1;gbkey=CDS;gene=ribE;product=riboflavin synthase alpha chain;protein_id=CAL12232.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2363249	2363506	.	-	.	ID=id3901;Note=Pfam match to entry PF00677 Lum_binding%2C Lumazine binding domain%2C score 147.4%2C E-value 1.6e-41;gbkey=misc_feature;gene=ribE;inference=protein motif:PFAM:PF00677
AM286415.1	EMBL	sequence_feature	2363543	2363797	.	-	.	ID=id3902;Note=Pfam match to entry PF00677 Lum_binding%2C Lumazine binding domain%2C score 148.8%2C E-value 6.2e-42;gbkey=misc_feature;gene=ribE;inference=protein motif:PFAM:PF00677
AM286415.1	EMBL	gene	2364118	2365491	.	+	.	ID=gene2130;Name=YE2163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2163
AM286415.1	EMBL	CDS	2364118	2365491	.	+	0	ID=cds2064;Parent=gene2130;Dbxref=EnsemblGenomes-Gn:YE2163,EnsemblGenomes-Tr:CAL12233,GOA:A1JPA1,InterPro:IPR002528,InterPro:IPR022913,NCBI_GP:CAL12233.1;Name=CAL12233.1;gbkey=CDS;product=putative transport protein;protein_id=CAL12233.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2364151	2364219	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2364247	2364315	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2364388	2364456	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2364499	2364558	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2364595	2364654	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2364667	2364735	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2364838	2364906	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2364949	2365017	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2365054	2365122	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2365165	2365218	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2365276	2365335	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2365378	2365446	.	+	.	ID=id3903;Note=12 probable transmembrane helices predicted for YE2163 by TMHMM2.0 at aa 12-34%2C 44-66%2C 91-113%2C 128-147%2C160-179%2C 184-206%2C 241-263%2C 278-300%2C 313-335%2C 350-367%2C387-406 and 421-443;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2364163	2364648	.	+	.	ID=id3904;Note=Pfam match to entry PF01554 UPF0013%2CUncharacterized membrane protein family UPF0013%2C score 162.5%2C E-value 4.6e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF01554
AM286415.1	EMBL	sequence_feature	2364664	2364696	.	+	.	ID=id3905;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2364844	2365332	.	+	.	ID=id3906;Note=Pfam match to entry PF01554 UPF0013%2CUncharacterized membrane protein family UPF0013%2C score 176.0%2C E-value 4e-50;gbkey=misc_feature;inference=protein motif:PFAM:PF01554
AM286415.1	EMBL	sequence_feature	2365066	2365098	.	+	.	ID=id3907;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2365851	2365927	.	+	.	ID=gene2131;Name=tRNA-Val (GAC);gbkey=Gene;gene=tRNA-Val (GAC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2365851	2365927	.	+	.	ID=rna87;Parent=gene2131;gbkey=tRNA;gene=tRNA-Val (GAC);product=tRNA-Val
AM286415.1	EMBL	exon	2365851	2365927	.	+	.	ID=id3908;Parent=rna87;gbkey=tRNA;gene=tRNA-Val (GAC);product=tRNA-Val
AM286415.1	EMBL	gene	2365976	2366052	.	+	.	ID=gene2132;Name=tRNA-Val (GAC);gbkey=Gene;gene=tRNA-Val (GAC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2365976	2366052	.	+	.	ID=rna88;Parent=gene2132;gbkey=tRNA;gene=tRNA-Val (GAC);product=tRNA-Val
AM286415.1	EMBL	exon	2365976	2366052	.	+	.	ID=id3909;Parent=rna88;gbkey=tRNA;gene=tRNA-Val (GAC);product=tRNA-Val
AM286415.1	EMBL	gene	2366095	2366171	.	+	.	ID=gene2133;Name=tRNA-Val (GAC);gbkey=Gene;gene=tRNA-Val (GAC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2366095	2366171	.	+	.	ID=rna89;Parent=gene2133;gbkey=tRNA;gene=tRNA-Val (GAC);product=tRNA-Val
AM286415.1	EMBL	exon	2366095	2366171	.	+	.	ID=id3910;Parent=rna89;gbkey=tRNA;gene=tRNA-Val (GAC);product=tRNA-Val
AM286415.1	EMBL	gene	2366685	2368097	.	+	.	ID=gene2134;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=YE2164
AM286415.1	EMBL	CDS	2366685	2368097	.	+	0	ID=cds2065;Parent=gene2134;Dbxref=EnsemblGenomes-Gn:YE2164,EnsemblGenomes-Tr:CAL12234,GOA:A1JPB0,InterPro:IPR001697,InterPro:IPR011037,InterPro:IPR015793,InterPro:IPR015794,InterPro:IPR015795,InterPro:IPR015806,InterPro:IPR015813,InterPro:IPR018209,UniProtKB/TrEMBL:A1JPB0,NCBI_GP:CAL12234.1;Name=CAL12234.1;gbkey=CDS;gene=pykF;product=pyruvate kinase I;protein_id=CAL12234.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2366685	2367719	.	+	.	ID=id3911;Note=Pfam match to entry PF00224 PK%2C Pyruvate kinase%2Cbarrel domain%2C score 722.5%2C E-value 1.2e-214;gbkey=misc_feature;gene=pykF;inference=protein motif:PFAM:PF00224
AM286415.1	EMBL	sequence_feature	2367327	2367365	.	+	.	ID=id3912;Note=PS00110 Pyruvate kinase active site signature.;gbkey=misc_feature;gene=pykF;inference=protein motif:Prosite:PS00110
AM286415.1	EMBL	sequence_feature	2367747	2368091	.	+	.	ID=id3913;Note=Pfam match to entry PF02887 PK_C%2C Pyruvate kinase%2Calpha/beta domain%2C score 103.9%2C E-value 2e-28;gbkey=misc_feature;gene=pykF;inference=protein motif:PFAM:PF02887
AM286415.1	EMBL	sequence_feature	2367882	2367947	.	+	.	ID=id3914;Note=Predicted helix-turn-helix motif with score 978.000%2C SD 2.52 at aa 400-421%2C sequence TTNEVTARQLILTKGVITQLVN;gbkey=misc_feature;gene=pykF
AM286415.1	EMBL	gene	2368417	2368653	.	+	.	ID=gene2135;Name=lpp;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;gene_synonym=mlpA;locus_tag=YE2165
AM286415.1	EMBL	CDS	2368417	2368653	.	+	0	ID=cds2066;Parent=gene2135;Dbxref=EnsemblGenomes-Gn:YE2165,EnsemblGenomes-Tr:CAL12235,GOA:A1JPB4,InterPro:IPR006817,InterPro:IPR016367,UniProtKB/TrEMBL:A1JPB4,NCBI_GP:CAL12235.1;Name=CAL12235.1;gbkey=CDS;gene=lpp;product=major outer membrane lipoprotein;protein_id=CAL12235.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2368447	2368479	.	+	.	ID=id3915;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=lpp;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2368885	2369952	.	-	.	ID=gene2136;Name=YE2166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2166
AM286415.1	EMBL	CDS	2368885	2369952	.	-	0	ID=cds2067;Parent=gene2136;Dbxref=EnsemblGenomes-Gn:YE2166,EnsemblGenomes-Tr:CAL12236,GOA:A1JPB8,InterPro:IPR005490,UniProtKB/TrEMBL:A1JPB8,NCBI_GP:CAL12236.1;Name=CAL12236.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12236.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2369245	2369670	.	-	.	ID=id3916;Note=Pfam match to entry PF03734 ErfK_YbiS_YhnG%2CErfK/YbiS/YcfS/YnhG%2C score 228.5%2C E-value 6.4e-66;gbkey=misc_feature;inference=protein motif:PFAM:PF03734
AM286415.1	EMBL	gene	2370219	2370641	.	-	.	ID=gene2137;Name=YE2167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2167
AM286415.1	EMBL	CDS	2370219	2370641	.	-	0	ID=cds2068;Parent=gene2137;Dbxref=EnsemblGenomes-Gn:YE2167,EnsemblGenomes-Tr:CAL12237,GOA:A1JPC1,InterPro:IPR003808,InterPro:IPR023939,NCBI_GP:CAL12237.1;Name=CAL12237.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12237.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2370237	2370614	.	-	.	ID=id3917;Note=Pfam match to entry PF02657 UPF0050%2C Domain of unknown function DUF%2C score 197.5%2C E-value 1.4e-56;gbkey=misc_feature;inference=protein motif:PFAM:PF02657
AM286415.1	EMBL	gene	2370803	2371954	.	-	.	ID=gene2138;Name=YE2168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2168
AM286415.1	EMBL	CDS	2370803	2371954	.	-	0	ID=cds2069;Parent=gene2138;Dbxref=EnsemblGenomes-Gn:YE2168,EnsemblGenomes-Tr:CAL12238,GOA:A1JPC4,InterPro:IPR000192,InterPro:IPR010970,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR020578,UniProtKB/TrEMBL:A1JPC4,NCBI_GP:CAL12238.1;Name=CAL12238.1;gbkey=CDS;product=putative selenocysteine lyase;protein_id=CAL12238.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2370842	2371921	.	-	.	ID=id3918;Note=Pfam match to entry PF00266 aminotran_5%2CAminotransferase class-V%2C score 67.0%2C E-value 2.6e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00266
AM286415.1	EMBL	sequence_feature	2371316	2371375	.	-	.	ID=id3919;Note=PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00595
AM286415.1	EMBL	gene	2372050	2373216	.	-	.	ID=gene2139;Name=YE2169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2169
AM286415.1	EMBL	CDS	2372050	2373216	.	-	0	ID=cds2070;Parent=gene2139;Dbxref=EnsemblGenomes-Gn:YE2169,EnsemblGenomes-Tr:CAL12239,GOA:A1JPC8,InterPro:IPR000825,InterPro:IPR011542,UniProtKB/TrEMBL:A1JPC8,NCBI_GP:CAL12239.1;Name=CAL12239.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12239.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2372131	2372886	.	-	.	ID=id3920;Note=Pfam match to entry PF01458 UPF0051%2CUncharacterized protein family (UPF0051)%2C score 292.8%2CE-value 2.7e-85;gbkey=misc_feature;inference=protein motif:PFAM:PF01458
AM286415.1	EMBL	gene	2373356	2374102	.	-	.	ID=gene2140;Name=YE2170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2170
AM286415.1	EMBL	CDS	2373356	2374102	.	-	0	ID=cds2071;Parent=gene2140;Dbxref=EnsemblGenomes-Gn:YE2170,EnsemblGenomes-Tr:CAL12240,GOA:A1JPD1,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010230,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JPD1,NCBI_GP:CAL12240.1;Name=CAL12240.1;gbkey=CDS;product=putative ATP-dependent transporter;protein_id=CAL12240.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2373437	2374024	.	-	.	ID=id3921;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 121.3%2C E-value 1.2e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2373623	2373667	.	-	.	ID=id3922;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2373980	2374003	.	-	.	ID=id3923;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2374159	2375670	.	-	.	ID=gene2141;Name=YE2171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2171
AM286415.1	EMBL	CDS	2374159	2375670	.	-	0	ID=cds2072;Parent=gene2141;Dbxref=EnsemblGenomes-Gn:YE2171,EnsemblGenomes-Tr:CAL12241,GOA:A1JPD6,InterPro:IPR000825,InterPro:IPR010231,UniProtKB/TrEMBL:A1JPD6,NCBI_GP:CAL12241.1;Name=CAL12241.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12241.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2374237	2375019	.	-	.	ID=id3924;Note=Pfam match to entry PF01458 UPF0051%2CUncharacterized protein family (UPF0051)%2C score 501.0%2CE-value 5.7e-148;gbkey=misc_feature;inference=protein motif:PFAM:PF01458
AM286415.1	EMBL	gene	2375685	2376056	.	-	.	ID=gene2142;Name=YE2172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2172
AM286415.1	EMBL	CDS	2375685	2376056	.	-	0	ID=cds2073;Parent=gene2142;Dbxref=EnsemblGenomes-Gn:YE2172,EnsemblGenomes-Tr:CAL12242,GOA:A1JPD9,InterPro:IPR000361,InterPro:IPR016092,InterPro:IPR017870,UniProtKB/TrEMBL:A1JPD9,NCBI_GP:CAL12242.1;Name=CAL12242.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12242.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2375691	2376005	.	-	.	ID=id3925;Note=Pfam match to entry PF01521 HesB-like%2C HesB-like domain%2C score 158.5%2C E-value 7.2e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF01521
AM286415.1	EMBL	sequence_feature	2375694	2375747	.	-	.	ID=id3926;Note=PS01152 Hypothetical hesB/yadR/yfhF family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01152
AM286415.1	EMBL	gene	2376748	2377170	.	-	.	ID=gene2143;Name=YE2173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2173
AM286415.1	EMBL	CDS	2376748	2377170	.	-	0	ID=cds2074;Parent=gene2143;Dbxref=EnsemblGenomes-Gn:YE2173,EnsemblGenomes-Tr:CAL12243,InterPro:IPR003736,InterPro:IPR006683,InterPro:IPR029069,UniProtKB/TrEMBL:A1JPE4,NCBI_GP:CAL12243.1;Name=CAL12243.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12243.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2376763	2377131	.	-	.	ID=id3927;Note=Pfam match to entry PF02584 DUF157%2C Uncharacterized protein PaaI%2C COG2050%2C score 196.0%2C E-value 3.9e-56;gbkey=misc_feature;inference=protein motif:PFAM:PF02584
AM286415.1	EMBL	gene	2377345	2380401	.	-	.	ID=gene2144;Name=YE2174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2174
AM286415.1	EMBL	CDS	2377345	2380401	.	-	0	ID=cds2075;Parent=gene2144;Dbxref=EnsemblGenomes-Gn:YE2174,EnsemblGenomes-Tr:CAL12244,GOA:A1JPE8,InterPro:IPR004113,InterPro:IPR006094,InterPro:IPR009051,InterPro:IPR016164,InterPro:IPR016166,InterPro:IPR016167,InterPro:IPR016169,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JPE8,NCBI_GP:CAL12244.1;Name=CAL12244.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12244.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2378347	2378382	.	-	.	ID=id3928;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	2378785	2379561	.	-	.	ID=id3929;Note=Pfam match to entry PF02913 FAD-oxidase_C%2C FAD linked oxidases%2C C-terminal domain%2C score 237.9%2C E-value 9.6e-69;gbkey=misc_feature;inference=protein motif:PFAM:PF02913
AM286415.1	EMBL	sequence_feature	2379199	2379228	.	-	.	ID=id3930;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	2379601	2380248	.	-	.	ID=id3931;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score 201.1%2C E-value 1.1e-57;gbkey=misc_feature;inference=protein motif:PFAM:PF01565
AM286415.1	EMBL	sequence_feature	2379883	2379906	.	-	.	ID=id3932;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2380848	2381951	.	+	.	ID=gene2145;Name=YE2175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2175
AM286415.1	EMBL	CDS	2380848	2381951	.	+	0	ID=cds2076;Parent=gene2145;Dbxref=EnsemblGenomes-Gn:YE2175,EnsemblGenomes-Tr:CAL12245,InterPro:IPR002549,UniProtKB/TrEMBL:A1JPF5,NCBI_GP:CAL12245.1;Name=CAL12245.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12245.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2380884	2380943	.	+	.	ID=id3933;Note=8 probable transmembrane helices predicted for YE2175 by TMHMM2.0 at aa 13-32%2C 37-56%2C 65-87%2C 159-181%2C216-238%2C 248-270%2C 283-302 and 317-339;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	2380956	2381015	.	+	.	ID=id3933;Note=8 probable transmembrane helices predicted for YE2175 by TMHMM2.0 at aa 13-32%2C 37-56%2C 65-87%2C 159-181%2C216-238%2C 248-270%2C 283-302 and 317-339;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	2381040	2381108	.	+	.	ID=id3933;Note=8 probable transmembrane helices predicted for YE2175 by TMHMM2.0 at aa 13-32%2C 37-56%2C 65-87%2C 159-181%2C216-238%2C 248-270%2C 283-302 and 317-339;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	2381322	2381390	.	+	.	ID=id3933;Note=8 probable transmembrane helices predicted for YE2175 by TMHMM2.0 at aa 13-32%2C 37-56%2C 65-87%2C 159-181%2C216-238%2C 248-270%2C 283-302 and 317-339;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	2381493	2381561	.	+	.	ID=id3933;Note=8 probable transmembrane helices predicted for YE2175 by TMHMM2.0 at aa 13-32%2C 37-56%2C 65-87%2C 159-181%2C216-238%2C 248-270%2C 283-302 and 317-339;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	2381589	2381657	.	+	.	ID=id3933;Note=8 probable transmembrane helices predicted for YE2175 by TMHMM2.0 at aa 13-32%2C 37-56%2C 65-87%2C 159-181%2C216-238%2C 248-270%2C 283-302 and 317-339;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	2381694	2381753	.	+	.	ID=id3933;Note=8 probable transmembrane helices predicted for YE2175 by TMHMM2.0 at aa 13-32%2C 37-56%2C 65-87%2C 159-181%2C216-238%2C 248-270%2C 283-302 and 317-339;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	2381796	2381864	.	+	.	ID=id3933;Note=8 probable transmembrane helices predicted for YE2175 by TMHMM2.0 at aa 13-32%2C 37-56%2C 65-87%2C 159-181%2C216-238%2C 248-270%2C 283-302 and 317-339;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	2380890	2381888	.	+	.	ID=id3934;Note=Pfam match to entry PF01594 UPF0118%2C Domain of unknown function DUF20%2C score 173.3%2C E-value 2.7e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF01594
AM286415.1	EMBL	transcript	2382205	2382313	.	+	.	ID=rna90;Note=RprA (RF00034) as predicted by Rfam%2C score 40.71%2Cpositions 1 to 108;gbkey=misc_RNA
AM286415.1	EMBL	exon	2382205	2382313	.	+	.	ID=id3935;Parent=rna90;Note=RprA (RF00034) as predicted by Rfam%2C score 40.71%2Cpositions 1 to 108;gbkey=misc_RNA
AM286415.1	EMBL	gene	2382512	2384893	.	-	.	ID=gene2146;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;gene_synonym=pps;locus_tag=YE2176
AM286415.1	EMBL	CDS	2382512	2384893	.	-	0	ID=cds2077;Parent=gene2146;Dbxref=EnsemblGenomes-Gn:YE2176,EnsemblGenomes-Tr:CAL12246,GOA:A1JPG2,InterPro:IPR000121,InterPro:IPR002192,InterPro:IPR006319,InterPro:IPR008279,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR015813,InterPro:IPR018274,InterPro:IPR023151,UniProtKB/TrEMBL:A1JPG2,NCBI_GP:CAL12246.1;Name=CAL12246.1;gbkey=CDS;gene=ppsA;product=phosphoenolpyruvate synthase;protein_id=CAL12246.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2382515	2383507	.	-	.	ID=id3936;Note=Pfam match to entry PF02896 PEP-utilizers_C%2CPEP-utilizing enzyme%2C TIM barrel domain%2C score 449.8%2CE-value 1.5e-132;gbkey=misc_feature;gene=ppsA;inference=protein motif:PFAM:PF02896
AM286415.1	EMBL	sequence_feature	2382752	2382808	.	-	.	ID=id3937;Note=PS00742 PEP-utilizing enzymes signature 2.;gbkey=misc_feature;gene=ppsA;inference=protein motif:Prosite:PS00742
AM286415.1	EMBL	sequence_feature	2383514	2383789	.	-	.	ID=id3938;Note=Pfam match to entry PF00391 PEP-utilizers%2CPEP-utilizing enzyme%2C mobile domain%2C score 158.9%2C E-value 5.7e-45;gbkey=misc_feature;gene=ppsA;inference=protein motif:PFAM:PF00391
AM286415.1	EMBL	sequence_feature	2383613	2383648	.	-	.	ID=id3939;Note=PS00370 PEP-utilizing enzymes phosphorylation site signature.;gbkey=misc_feature;gene=ppsA;inference=protein motif:Prosite:PS00370
AM286415.1	EMBL	sequence_feature	2383796	2384869	.	-	.	ID=id3940;Note=Pfam match to entry PF01326 PPDK_N_term%2C Pyruvate phosphate dikinase%2C PEP/pyruvate binding domain%2C score 507.6%2C E-value 6.2e-150;gbkey=misc_feature;gene=ppsA;inference=protein motif:PFAM:PF01326
AM286415.1	EMBL	gene	2385180	2386001	.	+	.	ID=gene2147;Name=YE2177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2177
AM286415.1	EMBL	CDS	2385180	2386001	.	+	0	ID=cds2078;Parent=gene2147;Dbxref=EnsemblGenomes-Gn:YE2177,EnsemblGenomes-Tr:CAL12247,GOA:A1JPI0,InterPro:IPR005177,InterPro:IPR008917,InterPro:IPR026530,NCBI_GP:CAL12247.1;Name=CAL12247.1;gbkey=CDS;product=Conserved hypothetical protein;protein_id=CAL12247.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2385180	2385983	.	+	.	ID=id3941;Note=Pfam match to entry PF03618 DUF299%2C Domain of unknown function (DUF299)%2C score 492.2%2C E-value 2.7e-145;gbkey=misc_feature;inference=protein motif:PFAM:PF03618
AM286415.1	EMBL	sequence_feature	2385636	2385659	.	+	.	ID=id3942;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2386228	2387277	.	+	.	ID=gene2148;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=YE2178
AM286415.1	EMBL	CDS	2386228	2387277	.	+	0	ID=cds2079;Parent=gene2148;Dbxref=EnsemblGenomes-Gn:YE2178,EnsemblGenomes-Tr:CAL12248,GOA:A1JPI4,InterPro:IPR006218,InterPro:IPR006219,InterPro:IPR013785,UniProtKB/TrEMBL:A1JPI4,NCBI_GP:CAL12248.1;Name=CAL12248.1;gbkey=CDS;gene=aroH;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=CAL12248.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2386285	2387262	.	+	.	ID=id3943;Note=Pfam match to entry PF00793 DAHP_synth_1%2C DAHP synthetase I family%2C score 548.0%2C E-value 4.3e-162;gbkey=misc_feature;gene=aroH;inference=protein motif:PFAM:PF00793
AM286415.1	EMBL	gene	2387460	2387606	.	+	.	ID=gene2149;Name=YE2179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2179
AM286415.1	EMBL	CDS	2387460	2387606	.	+	0	ID=cds2080;Parent=gene2149;Dbxref=EnsemblGenomes-Gn:YE2179,EnsemblGenomes-Tr:CAL12249,UniProtKB/TrEMBL:A1JPI7,NCBI_GP:CAL12249.1;Name=CAL12249.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12249.1;transl_table=11
AM286415.1	EMBL	gene	2387828	2389858	.	+	.	ID=gene2150;Name=hemR2;gbkey=Gene;gene=hemR2;gene_biotype=protein_coding;locus_tag=YE2180
AM286415.1	EMBL	CDS	2387828	2389858	.	+	0	ID=cds2081;Parent=gene2150;Dbxref=EnsemblGenomes-Gn:YE2180,EnsemblGenomes-Tr:CAL12250,GOA:A1JPJ1,InterPro:IPR000531,InterPro:IPR010949,InterPro:IPR011276,InterPro:IPR012910,UniProtKB/TrEMBL:A1JPJ1,NCBI_GP:CAL12250.1;Name=CAL12250.1;Note=Similar to Yersinia pestis hemin storage receptor precursor HmuR or Ypo0283 or Y0543 SWALL:HMUR_YERPE (SWALL:Q56989) (676 aa) fasta scores: E(): 1.2e-126%2C53.74 38d in 681 aa. Also similar to Yersinia enterocolitica hemin receptor precursor HemR or YE0331 SWALL:HEMR_YEREN (SWALL:P31499) (687 aa) fasta scores: E(): 7.5e-123%2C 53.21 38d in 699 aa;gbkey=CDS;gene=hemR2;inference=similar to sequence:UniProtKB:Q56989;product=hemin storage receptor protein;protein_id=CAL12250.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2389523	2389855	.	+	.	ID=id3944;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 52.3%2C E-value 6.8e-13;gbkey=misc_feature;gene=hemR2;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	gene	2389973	2391034	.	+	.	ID=gene2151;Name=hemS2;gbkey=Gene;gene=hemS2;gene_biotype=protein_coding;locus_tag=YE2181
AM286415.1	EMBL	CDS	2389973	2391034	.	+	0	ID=cds2082;Parent=gene2151;Dbxref=EnsemblGenomes-Gn:YE2181,EnsemblGenomes-Tr:CAL12251,GOA:A1JPJ5,InterPro:IPR007845,UniProtKB/TrEMBL:A1JPJ5,NCBI_GP:CAL12251.1;Name=CAL12251.1;Note=Similar to Yersinia enterocolitica hemin transport protein HemS or YE0330 SWALL:HEMS_YEREN (SWALL:P31517) (345 aa) fasta scores: E(): 3.2e-69%2C 51.59 38d in 345 aa and to Yersinia pestis hemin transport protein HemS or ypo0282 or y0542 SWALL:HMUS_YERPE (SWALL:Q56990) (345 aa) fasta scores: E(): 1.5e-73%2C 53.33 38d in 345 aa;gbkey=CDS;gene=hemS2;inference=similar to sequence:UniProtKB:Q56990;product=hemin transport protein;protein_id=CAL12251.1;transl_table=11
AM286415.1	EMBL	gene	2391027	2391860	.	+	.	ID=gene2152;Name=hmuT2;gbkey=Gene;gene=hmuT2;gene_biotype=protein_coding;locus_tag=YE2182
AM286415.1	EMBL	CDS	2391027	2391860	.	+	0	ID=cds2083;Parent=gene2152;Dbxref=EnsemblGenomes-Gn:YE2182,EnsemblGenomes-Tr:CAL12252,InterPro:IPR002491,UniProtKB/TrEMBL:A1JPJ8,NCBI_GP:CAL12252.1;Name=CAL12252.1;Note=Similar to Yersinia pestis hemin-binding periplasmic protein hmuT precursor or Ypo0281 or Y0541 SWALL:HMUT_YERPE (SWALL:Q56991) (279 aa) fasta scores: E(): 1.3e-57%2C 60.37 38d in 270 aa%2C and to Yersinia enterocolitica hemin binding protein HemT SWALL:P74979 (EMBL:X77867) (279 aa) fasta scores: E(): 5.8e-59%2C 61.11 id in 270 aa;gbkey=CDS;gene=hmuT2;inference=similar to sequence:UniProtKB:Q56991;product=hemin-binding periplasmic protein;protein_id=CAL12252.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2391093	2391788	.	+	.	ID=id3945;Note=Pfam match to entry PF01497 Peripla_BP_2%2CPeriplasmic binding protein%2C score 145.3%2C E-value 7e-41;gbkey=misc_feature;gene=hmuT2;inference=protein motif:PFAM:PF01497
AM286415.1	EMBL	gene	2391920	2393419	.	-	.	ID=gene2153;Name=YE2183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2183
AM286415.1	EMBL	CDS	2391920	2393419	.	-	0	ID=cds2084;Parent=gene2153;Dbxref=EnsemblGenomes-Gn:YE2183,EnsemblGenomes-Tr:CAL12253,InterPro:IPR003846,UniProtKB/TrEMBL:A1JPK5,NCBI_GP:CAL12253.1;Name=CAL12253.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12253.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2392001	2393359	.	-	.	ID=id3946;Note=Pfam match to entry PF02696 UPF0061%2CUncharacterized ACR%2C YdiU/UPF0061 family%2C score 644.5%2CE-value 3.8e-191;gbkey=misc_feature;inference=protein motif:PFAM:PF02696
AM286415.1	EMBL	gene	2393419	2394435	.	-	.	ID=gene2154;Name=lplA;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=YE2184
AM286415.1	EMBL	CDS	2393419	2394435	.	-	0	ID=cds2085;Parent=gene2154;Dbxref=EnsemblGenomes-Gn:YE2184,EnsemblGenomes-Tr:CAL12254,GOA:A1JPK8,InterPro:IPR004143,InterPro:IPR004562,InterPro:IPR019491,InterPro:IPR023741,NCBI_GP:CAL12254.1;Name=CAL12254.1;gbkey=CDS;gene=lplA;product=putative lipoate-protein ligase A;protein_id=CAL12254.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2393953	2394312	.	-	.	ID=id3947;Note=Pfam match to entry PF03099 BPL_LipA_LipB%2CBiotin/lipoate A/B protein ligase family%2C score 115.5%2CE-value 6.4e-32;gbkey=misc_feature;gene=lplA;inference=protein motif:PFAM:PF03099
AM286415.1	EMBL	gene	2395004	2395468	.	-	.	ID=gene2155;Name=nlpC;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=YE2185
AM286415.1	EMBL	CDS	2395004	2395468	.	-	0	ID=cds2086;Parent=gene2155;Dbxref=EnsemblGenomes-Gn:YE2185,EnsemblGenomes-Tr:CAL12255,InterPro:IPR000064,UniProtKB/TrEMBL:A1JPL2,NCBI_GP:CAL12255.1;Name=CAL12255.1;gbkey=CDS;gene=nlpC;product=putative lipoprotein;protein_id=CAL12255.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2395007	2395345	.	-	.	ID=id3948;Note=Pfam match to entry PF00877 NLPC_P60%2C NLP/P60 family%2C score 175.3%2C E-value 6.7e-50;gbkey=misc_feature;gene=nlpC;inference=protein motif:PFAM:PF00877
AM286415.1	EMBL	sequence_feature	2395358	2395468	.	-	.	ID=id3949;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;gene=nlpC;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	sequence_feature	2395418	2395450	.	-	.	ID=id3950;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nlpC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2395730	2396116	.	-	.	ID=gene2156;Name=YE2186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2186
AM286415.1	EMBL	CDS	2395730	2396116	.	-	0	ID=cds2087;Parent=gene2156;Dbxref=EnsemblGenomes-Gn:YE2186,EnsemblGenomes-Tr:CAL12256,GOA:A1JPL6,InterPro:IPR000620,InterPro:IPR022832,NCBI_GP:CAL12256.1;Name=CAL12256.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12256.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2396036	2396104	.	-	.	ID=id3951;Note=4 probable transmembrane helices predicted for YE2186 by TMHMM2.0 at aa 5-27%2C 47-69%2C 76-98 and 102-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2395910	2395978	.	-	.	ID=id3951;Note=4 probable transmembrane helices predicted for YE2186 by TMHMM2.0 at aa 5-27%2C 47-69%2C 76-98 and 102-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2395823	2395891	.	-	.	ID=id3951;Note=4 probable transmembrane helices predicted for YE2186 by TMHMM2.0 at aa 5-27%2C 47-69%2C 76-98 and 102-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2395754	2395813	.	-	.	ID=id3951;Note=4 probable transmembrane helices predicted for YE2186 by TMHMM2.0 at aa 5-27%2C 47-69%2C 76-98 and 102-121;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2396113	2396457	.	-	.	ID=gene2157;Name=YE2187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2187
AM286415.1	EMBL	CDS	2396113	2396457	.	-	0	ID=cds2088;Parent=gene2157;Dbxref=EnsemblGenomes-Gn:YE2187,EnsemblGenomes-Tr:CAL12257,GOA:A1JPL9,InterPro:IPR000620,InterPro:IPR022883,NCBI_GP:CAL12257.1;Name=CAL12257.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12257.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2396275	2396343	.	-	.	ID=id3952;Note=3 probable transmembrane helices predicted for YE2187 by TMHMM2.0 at aa 39-61%2C 66-88 and 93-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2396194	2396262	.	-	.	ID=id3952;Note=3 probable transmembrane helices predicted for YE2187 by TMHMM2.0 at aa 39-61%2C 66-88 and 93-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2396122	2396181	.	-	.	ID=id3952;Note=3 probable transmembrane helices predicted for YE2187 by TMHMM2.0 at aa 39-61%2C 66-88 and 93-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	2396122	2396331	.	-	.	ID=id3953;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 36.1%2C E-value 3e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	2396454	2398118	.	-	.	ID=gene2158;Name=YE2188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2188
AM286415.1	EMBL	CDS	2396454	2398118	.	-	0	ID=cds2089;Parent=gene2158;Dbxref=EnsemblGenomes-Gn:YE2188,EnsemblGenomes-Tr:CAL12258,GOA:A1JPM4,InterPro:IPR003342,InterPro:IPR022839,NCBI_GP:CAL12258.1;Name=CAL12258.1;gbkey=CDS;product=dolichyl-phosphate-mannose-protein mannosyltransferase-family protein;protein_id=CAL12258.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2398047	2398100	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	2397798	2397866	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	2397711	2397779	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	2397561	2397629	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	2397435	2397503	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	2397276	2397344	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	2397186	2397239	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	2397108	2397176	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	2397003	2397071	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	2396907	2396960	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	2396820	2396888	.	-	.	ID=id3954;Note=11 probable transmembrane helices predicted for YE2188 by TMHMM2.0 at aa 7-24%2C 85-107%2C 114-136%2C 164-186%2C206-228%2C 259-281%2C 294-311%2C 315-337%2C 350-372%2C 387-404 and 411-433;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	2397402	2398106	.	-	.	ID=id3955;Note=Pfam match to entry PF02366 PMT%2CDolichyl-phosphate-mannose-protein mannosyltransferase %2Cscore 174.0%2C E-value 1.6e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF02366
AM286415.1	EMBL	sequence_feature	2397534	2397653	.	-	.	ID=id3956;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	2397597	2397629	.	-	.	ID=id3957;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2398118	2399020	.	-	.	ID=gene2159;Name=YE2189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2189
AM286415.1	EMBL	CDS	2398118	2399020	.	-	0	ID=cds2090;Parent=gene2159;Dbxref=EnsemblGenomes-Gn:YE2189,EnsemblGenomes-Tr:CAL12259,GOA:A1JPN1,InterPro:IPR002509,InterPro:IPR011330,InterPro:IPR023557,NCBI_GP:CAL12259.1;Name=CAL12259.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12259.1;transl_table=11
AM286415.1	EMBL	gene	2399017	2401080	.	-	.	ID=gene2160;Name=YE2190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2190
AM286415.1	EMBL	CDS	2399017	2401080	.	-	0	ID=cds2091;Parent=gene2160;Dbxref=EnsemblGenomes-Gn:YE2190,EnsemblGenomes-Tr:CAL12260,GOA:A1JPN5,InterPro:IPR001509,InterPro:IPR002376,InterPro:IPR005793,InterPro:IPR011034,InterPro:IPR016040,InterPro:IPR021168,NCBI_GP:CAL12260.1;Name=CAL12260.1;gbkey=CDS;product=probable formyl transferase;protein_id=CAL12260.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2400190	2400477	.	-	.	ID=id3958;Note=Pfam match to entry PF02911 formyl_trans_C%2C Formyl transferase%2C C-terminal domain%2C score 80.5%2C E-value 2.2e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF02911
AM286415.1	EMBL	sequence_feature	2400274	2400306	.	-	.	ID=id3959;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2400550	2401077	.	-	.	ID=id3960;Note=Pfam match to entry PF00551 formyl_transf%2C Formyl transferase%2C score 59.1%2C E-value 6.2e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF00551
AM286415.1	EMBL	gene	2401077	2402060	.	-	.	ID=gene2161;Name=pmrF;gbkey=Gene;gene=pmrF;gene_biotype=protein_coding;locus_tag=YE2191
AM286415.1	EMBL	CDS	2401077	2402060	.	-	0	ID=cds2092;Parent=gene2161;Dbxref=EnsemblGenomes-Gn:YE2191,EnsemblGenomes-Tr:CAL12261,GOA:A1JPP5,InterPro:IPR001173,InterPro:IPR022857,InterPro:IPR029044,NCBI_GP:CAL12261.1;Name=CAL12261.1;gbkey=CDS;gene=pmrF;product=probable glycosyl transferase;protein_id=CAL12261.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2401290	2401358	.	-	.	ID=id3961;Note=2 probable transmembrane helices predicted for YE2191 by TMHMM2.0 at aa 235-257 and 272-294;gbkey=misc_feature;gene=pmrF;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2401179	2401247	.	-	.	ID=id3961;Note=2 probable transmembrane helices predicted for YE2191 by TMHMM2.0 at aa 235-257 and 272-294;gbkey=misc_feature;gene=pmrF;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2401536	2402030	.	-	.	ID=id3962;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 121.2%2C E-value 1.3e-33;gbkey=misc_feature;gene=pmrF;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	2402053	2403201	.	-	.	ID=gene2162;Name=YE2192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2192
AM286415.1	EMBL	CDS	2402053	2403201	.	-	0	ID=cds2093;Parent=gene2162;Dbxref=EnsemblGenomes-Gn:YE2192,EnsemblGenomes-Tr:CAL12262,GOA:A1JPP9,InterPro:IPR000653,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR022850,NCBI_GP:CAL12262.1;Name=CAL12262.1;gbkey=CDS;product=conserved hypothteical protein;protein_id=CAL12262.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2402080	2403174	.	-	.	ID=id3963;Note=Pfam match to entry PF01041 DegT_DnrJ_EryC1%2CDegT/DnrJ/EryC1/StrS aminotransferase family%2C score 569.6%2C E-value 1.3e-168;gbkey=misc_feature;inference=protein motif:PFAM:PF01041
AM286415.1	EMBL	gene	2403548	2404309	.	-	.	ID=gene2163;Name=btuD;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=YE2193
AM286415.1	EMBL	CDS	2403548	2404309	.	-	0	ID=cds2094;Parent=gene2163;Dbxref=EnsemblGenomes-Gn:YE2193,EnsemblGenomes-Tr:CAL12263,GOA:A1JPQ1,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR023693,InterPro:IPR027417,NCBI_GP:CAL12263.1;Name=CAL12263.1;gbkey=CDS;gene=btuD;product=putative vitamin B12 transport ATP-binding protein;protein_id=CAL12263.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2403674	2404237	.	-	.	ID=id3964;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 118.8%2C E-value 6.8e-33;gbkey=misc_feature;gene=btuD;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2403878	2403922	.	-	.	ID=id3965;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=btuD;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2404193	2404216	.	-	.	ID=id3966;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=btuD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2404331	2404885	.	-	.	ID=gene2164;Name=btuE;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=YE2194
AM286415.1	EMBL	CDS	2404331	2404885	.	-	0	ID=cds2095;Parent=gene2164;Dbxref=EnsemblGenomes-Gn:YE2194,EnsemblGenomes-Tr:CAL12264,GOA:A1JPQ6,InterPro:IPR000889,InterPro:IPR012336,InterPro:IPR029759,UniProtKB/TrEMBL:A1JPQ6,NCBI_GP:CAL12264.1;Name=CAL12264.1;gbkey=CDS;gene=btuE;product=putative vitamin B12 transport protein;protein_id=CAL12264.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2404550	2404876	.	-	.	ID=id3967;Note=Pfam match to entry PF00255 GSHPx%2C Glutathione peroxidase%2C score 192.2%2C E-value 5.5e-55;gbkey=misc_feature;gene=btuE;inference=protein motif:PFAM:PF00255
AM286415.1	EMBL	gene	2404955	2405962	.	-	.	ID=gene2165;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=YE2195
AM286415.1	EMBL	CDS	2404955	2405962	.	-	0	ID=cds2096;Parent=gene2165;Dbxref=EnsemblGenomes-Gn:YE2195,EnsemblGenomes-Tr:CAL12265,GOA:A1JPQ9,InterPro:IPR000522,InterPro:IPR023691,InterPro:IPR029022,NCBI_GP:CAL12265.1;Name=CAL12265.1;gbkey=CDS;gene=btuC;product=putative vitamin B12 transport system permease protein;protein_id=CAL12265.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2404973	2405845	.	-	.	ID=id3968;Note=Pfam match to entry PF01032 FecCD%2C FecCD transport family%2C score 356.9%2C E-value 1.4e-104;gbkey=misc_feature;gene=btuC;inference=protein motif:PFAM:PF01032
AM286415.1	EMBL	sequence_feature	2405834	2405902	.	-	.	ID=id3969;Note=9 probable transmembrane helices predicted for YE2195 by TMHMM2.0 at aa 21-43%2C 63-82%2C 95-114%2C 118-140%2C152-174%2C 198-220%2C 241-263%2C 283-305 and 310-329;gbkey=misc_feature;gene=btuC;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	2405717	2405776	.	-	.	ID=id3969;Note=9 probable transmembrane helices predicted for YE2195 by TMHMM2.0 at aa 21-43%2C 63-82%2C 95-114%2C 118-140%2C152-174%2C 198-220%2C 241-263%2C 283-305 and 310-329;gbkey=misc_feature;gene=btuC;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	2405621	2405680	.	-	.	ID=id3969;Note=9 probable transmembrane helices predicted for YE2195 by TMHMM2.0 at aa 21-43%2C 63-82%2C 95-114%2C 118-140%2C152-174%2C 198-220%2C 241-263%2C 283-305 and 310-329;gbkey=misc_feature;gene=btuC;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	2405543	2405611	.	-	.	ID=id3969;Note=9 probable transmembrane helices predicted for YE2195 by TMHMM2.0 at aa 21-43%2C 63-82%2C 95-114%2C 118-140%2C152-174%2C 198-220%2C 241-263%2C 283-305 and 310-329;gbkey=misc_feature;gene=btuC;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	2405441	2405509	.	-	.	ID=id3969;Note=9 probable transmembrane helices predicted for YE2195 by TMHMM2.0 at aa 21-43%2C 63-82%2C 95-114%2C 118-140%2C152-174%2C 198-220%2C 241-263%2C 283-305 and 310-329;gbkey=misc_feature;gene=btuC;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	2405303	2405371	.	-	.	ID=id3969;Note=9 probable transmembrane helices predicted for YE2195 by TMHMM2.0 at aa 21-43%2C 63-82%2C 95-114%2C 118-140%2C152-174%2C 198-220%2C 241-263%2C 283-305 and 310-329;gbkey=misc_feature;gene=btuC;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	2405174	2405242	.	-	.	ID=id3969;Note=9 probable transmembrane helices predicted for YE2195 by TMHMM2.0 at aa 21-43%2C 63-82%2C 95-114%2C 118-140%2C152-174%2C 198-220%2C 241-263%2C 283-305 and 310-329;gbkey=misc_feature;gene=btuC;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	2405048	2405116	.	-	.	ID=id3969;Note=9 probable transmembrane helices predicted for YE2195 by TMHMM2.0 at aa 21-43%2C 63-82%2C 95-114%2C 118-140%2C152-174%2C 198-220%2C 241-263%2C 283-305 and 310-329;gbkey=misc_feature;gene=btuC;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	2404976	2405035	.	-	.	ID=id3969;Note=9 probable transmembrane helices predicted for YE2195 by TMHMM2.0 at aa 21-43%2C 63-82%2C 95-114%2C 118-140%2C152-174%2C 198-220%2C 241-263%2C 283-305 and 310-329;gbkey=misc_feature;gene=btuC;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	2405585	2405617	.	-	.	ID=id3970;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=btuC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2406135	2406629	.	-	.	ID=gene2166;Name=YE2196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2196
AM286415.1	EMBL	CDS	2406135	2406629	.	-	0	ID=cds2097;Parent=gene2166;Dbxref=EnsemblGenomes-Gn:YE2196,EnsemblGenomes-Tr:CAL12266,InterPro:IPR019638,UniProtKB/TrEMBL:A1JPR3,NCBI_GP:CAL12266.1;Name=CAL12266.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12266.1;transl_table=11
AM286415.1	EMBL	gene	2407702	2408676	.	-	.	ID=gene2167;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=YE2198
AM286415.1	EMBL	CDS	2407702	2408676	.	-	0	ID=cds2098;Parent=gene2167;Dbxref=EnsemblGenomes-Gn:YE2198,EnsemblGenomes-Tr:CAL12267,GOA:A1JPR5,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JPR5,NCBI_GP:CAL12267.1;Name=CAL12267.1;gbkey=CDS;gene=cysB;product=cys regulon transcriptional activator;protein_id=CAL12267.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2407789	2408415	.	-	.	ID=id3971;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 160.7%2C E-value 1.6e-45;gbkey=misc_feature;gene=cysB;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	2408422	2408463	.	-	.	ID=id3972;Note=PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=cysB;inference=protein motif:Prosite:PS00165
AM286415.1	EMBL	sequence_feature	2408485	2408670	.	-	.	ID=id3973;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 69.2%2C E-value 5.6e-18;gbkey=misc_feature;gene=cysB;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2408533	2408625	.	-	.	ID=id3974;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=cysB;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	gene	2409236	2411851	.	-	.	ID=gene2168;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;gene_synonym=supX;locus_tag=YE2199
AM286415.1	EMBL	CDS	2409236	2411851	.	-	0	ID=cds2099;Parent=gene2168;Dbxref=EnsemblGenomes-Gn:YE2199,EnsemblGenomes-Tr:CAL12268,GOA:A1JPS1,InterPro:IPR000380,InterPro:IPR003601,InterPro:IPR003602,InterPro:IPR005733,InterPro:IPR006171,InterPro:IPR013263,InterPro:IPR013497,InterPro:IPR013498,InterPro:IPR013824,InterPro:IPR013825,InterPro:IPR023405,InterPro:IPR023406,InterPro:IPR028612,UniProtKB/TrEMBL:A1JPS1,NCBI_GP:CAL12268.1;Name=CAL12268.1;gbkey=CDS;gene=topA;product=DNA topoisomerase I;protein_id=CAL12268.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2409599	2409712	.	-	.	ID=id3975;Note=Pfam match to entry PF01396 zf-C4_Topoisom%2CTopoisomerase DNA binding C4 zinc finger%2C score 56.2%2CE-value 4.5e-14;gbkey=misc_feature;gene=topA;inference=protein motif:PFAM:PF01396
AM286415.1	EMBL	sequence_feature	2409917	2410048	.	-	.	ID=id3976;Note=Pfam match to entry PF01396 zf-C4_Topoisom%2CTopoisomerase DNA binding C4 zinc finger%2C score 54.6%2CE-value 1.4e-13;gbkey=misc_feature;gene=topA;inference=protein motif:PFAM:PF01396
AM286415.1	EMBL	sequence_feature	2410175	2411374	.	-	.	ID=id3977;Note=Pfam match to entry PF01131 Topoisom_bac%2C DNA topoisomerase%2C score 618.0%2C E-value 3.5e-183;gbkey=misc_feature;gene=topA;inference=protein motif:PFAM:PF01131
AM286415.1	EMBL	sequence_feature	2410865	2410909	.	-	.	ID=id3978;Note=PS00396 Prokaryotic DNA topoisomerase I active site.;gbkey=misc_feature;gene=topA;inference=protein motif:Prosite:PS00396
AM286415.1	EMBL	sequence_feature	2411414	2411845	.	-	.	ID=id3979;Note=Pfam match to entry PF01751 Toprim%2C Toprim domain %2Cscore 129.1%2C E-value 5.3e-36;gbkey=misc_feature;gene=topA;inference=protein motif:PFAM:PF01751
AM286415.1	EMBL	gene	2412292	2412543	.	+	.	ID=gene2169;Name=YE2201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2201
AM286415.1	EMBL	CDS	2412292	2412543	.	+	0	ID=cds2100;Parent=gene2169;Dbxref=EnsemblGenomes-Gn:YE2201,EnsemblGenomes-Tr:CAL12269,InterPro:IPR019633,UniProtKB/TrEMBL:A1JPS5,NCBI_GP:CAL12269.1;Name=CAL12269.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12269.1;transl_table=11
AM286415.1	EMBL	repeat_region	2412610	2413913	.	-	.	ID=id3980;Note=IS1330;gbkey=repeat_region
AM286415.1	EMBL	gene	2412636	2413829	.	-	.	ID=gene2170;Name=tpn1330;gbkey=Gene;gene=tpn1330;gene_biotype=protein_coding;locus_tag=YE2202
AM286415.1	EMBL	CDS	2412636	2413829	.	-	0	ID=cds2101;Parent=gene2170;Dbxref=EnsemblGenomes-Gn:YE2202,EnsemblGenomes-Tr:CAL12270,GOA:A1JI33,InterPro:IPR002559,InterPro:IPR012337,UniProtKB/TrEMBL:A1JI33,NCBI_GP:CAL12270.1;Name=CAL12270.1;Note=Previously sequenced as Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:CAC83041 (EMBL:AJ344215) (397 aa) fasta scores: E(): 5.4e-162%2C99.24 38d in 397 aa. Also similar to Shigella flexneri%2Cand Shigella flexneri 2a IS10 orf S0034 or Cp0027 SWALL:Q9AFX7 (EMBL:AF348706) (407 aa) fasta scores: E(): 6.5e-113%2C 68.51 38d in 397 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330;protein_id=CAL12270.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2412840	2413559	.	-	.	ID=id3981;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 52.8%2C E-value 4.8e-13;gbkey=misc_feature;gene=tpn1330;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	gene	2413957	2415003	.	-	.	ID=gene2171;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=YE2203
AM286415.1	EMBL	CDS	2413957	2415003	.	-	0	ID=cds2102;Parent=gene2171;Dbxref=EnsemblGenomes-Gn:YE2203,EnsemblGenomes-Tr:CAL12271,GOA:A1JPT2,InterPro:IPR002142,InterPro:IPR013703,InterPro:IPR029045,UniProtKB/TrEMBL:A1JPT2,NCBI_GP:CAL12271.1;Name=CAL12271.1;gbkey=CDS;gene=sohB;product=peptidase family U7 protein;protein_id=CAL12271.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2414071	2414529	.	-	.	ID=id3982;Note=Pfam match to entry PF01343 Peptidase_U7%2C Peptidase family U7%2C score 194.0%2C E-value 1.5e-55;gbkey=misc_feature;gene=sohB;inference=protein motif:PFAM:PF01343
AM286415.1	EMBL	sequence_feature	2414917	2414985	.	-	.	ID=id3983;Note=1 probable transmembrane helix predicted for YE2203 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=sohB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2415176	2415937	.	+	.	ID=gene2172;Name=YE2204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2204
AM286415.1	EMBL	CDS	2415176	2415937	.	+	0	ID=cds2103;Parent=gene2172;Dbxref=EnsemblGenomes-Gn:YE2204,EnsemblGenomes-Tr:CAL12272,GOA:A1JPT7,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,UniProtKB/TrEMBL:A1JPT7,NCBI_GP:CAL12272.1;Name=CAL12272.1;gbkey=CDS;product=putative short chain dehydrogenase;protein_id=CAL12272.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2415206	2415916	.	+	.	ID=id3984;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 220.6%2C E-value 1.5e-63;gbkey=misc_feature;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	sequence_feature	2415629	2415715	.	+	.	ID=id3985;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	gene	2415949	2416539	.	+	.	ID=gene2173;Name=btuR;gbkey=Gene;gene=btuR;gene_biotype=protein_coding;gene_synonym=cobA;locus_tag=YE2205
AM286415.1	EMBL	CDS	2415949	2416539	.	+	0	ID=cds2104;Parent=gene2173;Dbxref=EnsemblGenomes-Gn:YE2205,EnsemblGenomes-Tr:CAL12273,GOA:A1JPU1,InterPro:IPR003724,InterPro:IPR025826,InterPro:IPR027417,UniProtKB/TrEMBL:A1JPU1,NCBI_GP:CAL12273.1;Name=CAL12273.1;gbkey=CDS;gene=btuR;product=cob(I)alamin adenosyltransferase;protein_id=CAL12273.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2416012	2416536	.	+	.	ID=id3986;Note=Pfam match to entry PF02572 CobA_CobO_BtuR%2CATP:corrinoid adenosyltransferase BtuR/CobO/CobP%2C score 389.3%2C E-value 2.5e-114;gbkey=misc_feature;gene=btuR;inference=protein motif:PFAM:PF02572
AM286415.1	EMBL	gene	2416616	2417545	.	-	.	ID=gene2174;Name=YE2206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2206
AM286415.1	EMBL	CDS	2416616	2417545	.	-	0	ID=cds2105;Parent=gene2174;Dbxref=EnsemblGenomes-Gn:YE2206,EnsemblGenomes-Tr:CAL12274,GOA:A1JPU4,InterPro:IPR000748,InterPro:IPR002942,InterPro:IPR006145,InterPro:IPR018496,InterPro:IPR020103,UniProtKB/TrEMBL:A1JPU4,NCBI_GP:CAL12274.1;Name=CAL12274.1;gbkey=CDS;product=putative RNA pseudouridylate synthase-family protein;protein_id=CAL12274.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2416964	2417368	.	-	.	ID=id3987;Note=Pfam match to entry PF00849 PseudoU_synth_2%2C RNA pseudouridylate synthase%2C score 56.3%2C E-value 4.4e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00849
AM286415.1	EMBL	sequence_feature	2417207	2417251	.	-	.	ID=id3988;Note=PS01149 Rsu family of pseudouridine synthase signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01149
AM286415.1	EMBL	gene	2417906	2418526	.	-	.	ID=gene2175;Name=YE2207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2207
AM286415.1	EMBL	CDS	2417906	2418526	.	-	0	ID=cds2106;Parent=gene2175;Dbxref=EnsemblGenomes-Gn:YE2207,EnsemblGenomes-Tr:CAL12275,GOA:A1JPU7,InterPro:IPR006070,InterPro:IPR017945,UniProtKB/TrEMBL:A1JPU7,NCBI_GP:CAL12275.1;Name=CAL12275.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12275.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2417933	2418463	.	-	.	ID=id3989;Note=Pfam match to entry PF01300 Sua5_yciO_yrdC%2C yrdC domain%2C score 255.8%2C E-value 3.9e-74;gbkey=misc_feature;inference=protein motif:PFAM:PF01300
AM286415.1	EMBL	sequence_feature	2418404	2418442	.	-	.	ID=id3990;Note=PS01147 SUA5/yciO/yrdC family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01147
AM286415.1	EMBL	gene	2418555	2419343	.	-	.	ID=gene2176;Name=trpH;gbkey=Gene;gene=trpH;gene_biotype=protein_coding;locus_tag=YE2208
AM286415.1	EMBL	CDS	2418555	2419343	.	-	0	ID=cds2107;Parent=gene2176;Dbxref=EnsemblGenomes-Gn:YE2208,EnsemblGenomes-Tr:CAL12276,GOA:A1JPV2,InterPro:IPR004013,InterPro:IPR016195,UniProtKB/TrEMBL:A1JPV2,NCBI_GP:CAL12276.1;Name=CAL12276.1;gbkey=CDS;gene=trpH;product=conserved hypothetical protein;protein_id=CAL12276.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2418630	2419007	.	-	.	ID=id3991;Note=Pfam match to entry PF02811 PHP_C%2C PHP domain C-terminal region%2C score 72.0%2C E-value 7.9e-19;gbkey=misc_feature;gene=trpH;inference=protein motif:PFAM:PF02811
AM286415.1	EMBL	sequence_feature	2419200	2419343	.	-	.	ID=id3992;Note=Pfam match to entry PF02231 PHP_N%2C PHP domain N-terminal region%2C score 13.8%2C E-value 7.1e-05;gbkey=misc_feature;gene=trpH;inference=protein motif:PFAM:PF02231
AM286415.1	EMBL	gene	2420029	2421591	.	+	.	ID=gene2177;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=YE2209
AM286415.1	EMBL	CDS	2420029	2421591	.	+	0	ID=cds2108;Parent=gene2177;Dbxref=EnsemblGenomes-Gn:YE2209,EnsemblGenomes-Tr:CAL12277,GOA:A1JPV8,InterPro:IPR005257,InterPro:IPR005801,InterPro:IPR006805,InterPro:IPR015890,InterPro:IPR019999,UniProtKB/TrEMBL:A1JPV8,NCBI_GP:CAL12277.1;Name=CAL12277.1;gbkey=CDS;gene=trpE;product=anthranilate synthase component I;protein_id=CAL12277.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2420044	2420076	.	+	.	ID=id3993;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=trpE;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2420749	2421558	.	+	.	ID=id3994;Note=Pfam match to entry PF00425 chorismate_bind%2Cchorismate binding enzyme%2C score 531.3%2C E-value 4.5e-157;gbkey=misc_feature;gene=trpE;inference=protein motif:PFAM:PF00425
AM286415.1	EMBL	gene	2421606	2422196	.	+	.	ID=gene2178;Name=trpG;gbkey=Gene;gene=trpG;gene_biotype=protein_coding;locus_tag=YE2210
AM286415.1	EMBL	CDS	2421606	2422196	.	+	0	ID=cds2109;Parent=gene2178;Dbxref=EnsemblGenomes-Gn:YE2210,EnsemblGenomes-Tr:CAL12278,GOA:A1JPW1,InterPro:IPR006221,InterPro:IPR017926,InterPro:IPR029062,UniProtKB/TrEMBL:A1JPW1,NCBI_GP:CAL12278.1;Name=CAL12278.1;gbkey=CDS;gene=trpG;product=anthranilate synthase component II;protein_id=CAL12278.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2421618	2422175	.	+	.	ID=id3995;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 235.7%2C E-value 4.3e-68;gbkey=misc_feature;gene=trpG;inference=protein motif:PFAM:PF00117
AM286415.1	EMBL	sequence_feature	2421840	2421875	.	+	.	ID=id3996;Note=PS00442 Glutamine amidotransferases class-I active site.;gbkey=misc_feature;gene=trpG;inference=protein motif:Prosite:PS00442
AM286415.1	EMBL	gene	2422314	2423273	.	+	.	ID=gene2179;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=YE2211
AM286415.1	EMBL	CDS	2422314	2423273	.	+	0	ID=cds2110;Parent=gene2179;Dbxref=EnsemblGenomes-Gn:YE2211,EnsemblGenomes-Tr:CAL12279,GOA:A1JPW5,InterPro:IPR000312,InterPro:IPR005940,InterPro:IPR017459,UniProtKB/TrEMBL:A1JPW5,NCBI_GP:CAL12279.1;Name=CAL12279.1;gbkey=CDS;gene=trpD;product=anthranilate phosphoribosyltransferase;protein_id=CAL12279.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2422314	2422469	.	+	.	ID=id3997;Note=Pfam match to entry PF02885 Glycos_trans_3N%2CGlycosyl transferase family%2C helical bundle domain%2C score 31.5%2C E-value 1.3e-06;gbkey=misc_feature;gene=trpD;inference=protein motif:PFAM:PF02885
AM286415.1	EMBL	sequence_feature	2422485	2423240	.	+	.	ID=id3998;Note=Pfam match to entry PF00591 Glycos_transf_3%2CGlycosyl transferase family%2C a/b domain%2C score 456.1%2CE-value 1.9e-134;gbkey=misc_feature;gene=trpD;inference=protein motif:PFAM:PF00591
AM286415.1	EMBL	sequence_feature	2422545	2422577	.	+	.	ID=id3999;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=trpD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2423319	2424653	.	+	.	ID=gene2180;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=YE2212
AM286415.1	EMBL	CDS	2423319	2424653	.	+	0	ID=cds2111;Parent=gene2180;Dbxref=EnsemblGenomes-Gn:YE2212,EnsemblGenomes-Tr:CAL12280,GOA:A1JPW9,InterPro:IPR001240,InterPro:IPR001468,InterPro:IPR011060,InterPro:IPR013785,InterPro:IPR013798,UniProtKB/TrEMBL:A1JPW9,NCBI_GP:CAL12280.1;Name=CAL12280.1;gbkey=CDS;gene=trpC;product=tryptophan biosynthesis protein TrpCF;protein_id=CAL12280.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2423319	2424050	.	+	.	ID=id4000;Note=Pfam match to entry PF00218 IGPS%2C Indole-3-glycerol phosphate synthase%2C score 471.1%2C E-value 5.9e-139;gbkey=misc_feature;gene=trpC;inference=protein motif:PFAM:PF00218
AM286415.1	EMBL	sequence_feature	2423442	2423486	.	+	.	ID=id4001;Note=PS00614 Indole-3-glycerol phosphate synthase signature.;gbkey=misc_feature;gene=trpC;inference=protein motif:Prosite:PS00614
AM286415.1	EMBL	sequence_feature	2424063	2424638	.	+	.	ID=id4002;Note=Pfam match to entry PF00697 PRAI%2CN-(5'phosphoribosyl)anthranilate (PRA) isomerase%2C score 270.1%2C E-value 2e-78;gbkey=misc_feature;gene=trpC;inference=protein motif:PFAM:PF00697
AM286415.1	EMBL	sequence_feature	2424243	2424308	.	+	.	ID=id4003;Note=Predicted helix-turn-helix motif with score 1023.000%2C SD 2.67 at aa 309-330%2C sequence ETIQQTAERLSLSAVQLHGHED;gbkey=misc_feature;gene=trpC
AM286415.1	EMBL	gene	2424837	2426027	.	+	.	ID=gene2181;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=YE2213
AM286415.1	EMBL	CDS	2424837	2426027	.	+	0	ID=cds2112;Parent=gene2181;Dbxref=EnsemblGenomes-Gn:YE2213,EnsemblGenomes-Tr:CAL12281,GOA:A1JPX6,InterPro:IPR001926,InterPro:IPR006653,InterPro:IPR006654,InterPro:IPR023026,NCBI_GP:CAL12281.1;Name=CAL12281.1;gbkey=CDS;gene=trpB;product=tryptophan synthase beta chain;protein_id=CAL12281.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2424981	2425970	.	+	.	ID=id4004;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 391.4%2CE-value 5.6e-115;gbkey=misc_feature;gene=trpB;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	sequence_feature	2425071	2425100	.	+	.	ID=id4005;Note=PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=trpB;inference=protein motif:Prosite:PS00168
AM286415.1	EMBL	sequence_feature	2425170	2425202	.	+	.	ID=id4006;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=trpB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2426027	2426833	.	+	.	ID=gene2182;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=YE2214
AM286415.1	EMBL	CDS	2426027	2426833	.	+	0	ID=cds2113;Parent=gene2182;Dbxref=EnsemblGenomes-Gn:YE2214,EnsemblGenomes-Tr:CAL12282,GOA:A1JPY2,InterPro:IPR002028,InterPro:IPR011060,InterPro:IPR013785,InterPro:IPR018204,NCBI_GP:CAL12282.1;Name=CAL12282.1;gbkey=CDS;gene=trpA;product=tryptophan synthase alpha chain;protein_id=CAL12282.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2426048	2426827	.	+	.	ID=id4007;Note=Pfam match to entry PF00290 trp_syntA%2C Tryptophan synthase alpha chain%2C score 466.7%2C E-value 1.2e-137;gbkey=misc_feature;gene=trpA;inference=protein motif:PFAM:PF00290
AM286415.1	EMBL	sequence_feature	2426168	2426209	.	+	.	ID=id4008;Note=PS00167 Tryptophan synthase alpha chain signature.;gbkey=misc_feature;gene=trpA;inference=protein motif:Prosite:PS00167
AM286415.1	EMBL	gene	2427095	2427409	.	+	.	ID=gene2183;Name=YE2215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2215
AM286415.1	EMBL	CDS	2427095	2427409	.	+	0	ID=cds2114;Parent=gene2183;Dbxref=EnsemblGenomes-Gn:YE2215,EnsemblGenomes-Tr:CAL12283,InterPro:IPR007055,InterPro:IPR014004,UniProtKB/TrEMBL:A1JPY9,NCBI_GP:CAL12283.1;Name=CAL12283.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL12283.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2427131	2427163	.	+	.	ID=id4009;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2427708	2428343	.	-	.	ID=gene2184;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=YE2216
AM286415.1	EMBL	CDS	2427708	2428343	.	-	0	ID=cds2115;Parent=gene2184;Dbxref=EnsemblGenomes-Gn:YE2216,EnsemblGenomes-Tr:CAL12284,GOA:A1JPZ4,InterPro:IPR000758,InterPro:IPR005618,InterPro:IPR011250,InterPro:IPR017690,UniProtKB/TrEMBL:A1JPZ4,NCBI_GP:CAL12284.1;Name=CAL12284.1;gbkey=CDS;gene=ompW;product=putative exported protein;protein_id=CAL12284.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2427711	2428277	.	-	.	ID=id4010;Note=Pfam match to entry PF03922 OmpW%2C OmpW family %2Cscore 311.6%2C E-value 6.1e-91;gbkey=misc_feature;gene=ompW;inference=protein motif:PFAM:PF03922
AM286415.1	EMBL	sequence_feature	2427711	2427737	.	-	.	ID=id4011;Note=PS00695 Enterobacterial virulence outer membrane protein signature 2.;gbkey=misc_feature;gene=ompW;inference=protein motif:Prosite:PS00695
AM286415.1	EMBL	gene	2428604	2429047	.	+	.	ID=gene2185;Name=YE2216A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2216A
AM286415.1	EMBL	CDS	2428604	2429047	.	+	0	ID=cds2116;Parent=gene2185;Dbxref=EnsemblGenomes-Gn:YE2216A,EnsemblGenomes-Tr:CAL12285,InterPro:IPR005358,UniProtKB/TrEMBL:A1JPZ8,NCBI_GP:CAL12285.1;Name=CAL12285.1;Note=Similar to many proteins of undefined function including: Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YkgJ or b0288 or z0354 or ecs0318 SWALL:YKGJ_ECOLI (SWALL:P71300) (109 aa) fasta scores: E(): 5e-25%2C 58.33 38d in 108 aa%2C Pseudomonas aeruginosa hypothetical protein Pa3209 SWALL:Q9HZ31 (EMBL:AE004744) (123 aa) fasta scores: E(): 3.1e-22%2C 54.54 38d in 110 aa and to Acinetobacter calcoaceticus putative ferredoxin SWALL:FERX_ACICA (SWALL:P31004) (121 aa) fasta scores: E(): 3.6e-13%2C 43.1 38d in 116 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P71300;product=conserved hypothetical protein;protein_id=CAL12285.1;transl_table=11
AM286415.1	EMBL	gene	2429099	2429866	.	+	.	ID=gene2186;Name=YE2218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2218
AM286415.1	EMBL	CDS	2429099	2429866	.	+	0	ID=cds2117;Parent=gene2186;Dbxref=EnsemblGenomes-Gn:YE2218,EnsemblGenomes-Tr:CAL12286,GOA:A1JQ02,InterPro:IPR009627,NCBI_GP:CAL12286.1;Name=CAL12286.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12286.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2429156	2429224	.	+	.	ID=id4012;Note=6 probable transmembrane helices predicted for YE2218 by TMHMM2.0 at aa 20-42%2C 86-108%2C 121-143%2C 147-169%2C189-211 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2429354	2429422	.	+	.	ID=id4012;Note=6 probable transmembrane helices predicted for YE2218 by TMHMM2.0 at aa 20-42%2C 86-108%2C 121-143%2C 147-169%2C189-211 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2429459	2429527	.	+	.	ID=id4012;Note=6 probable transmembrane helices predicted for YE2218 by TMHMM2.0 at aa 20-42%2C 86-108%2C 121-143%2C 147-169%2C189-211 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2429537	2429605	.	+	.	ID=id4012;Note=6 probable transmembrane helices predicted for YE2218 by TMHMM2.0 at aa 20-42%2C 86-108%2C 121-143%2C 147-169%2C189-211 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2429663	2429731	.	+	.	ID=id4012;Note=6 probable transmembrane helices predicted for YE2218 by TMHMM2.0 at aa 20-42%2C 86-108%2C 121-143%2C 147-169%2C189-211 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2429759	2429827	.	+	.	ID=id4012;Note=6 probable transmembrane helices predicted for YE2218 by TMHMM2.0 at aa 20-42%2C 86-108%2C 121-143%2C 147-169%2C189-211 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	2429913	2431667	.	-	.	ID=gene2187;Name=YE2219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2219
AM286415.1	EMBL	CDS	2429913	2431667	.	-	0	ID=cds2118;Parent=gene2187;Dbxref=EnsemblGenomes-Gn:YE2219,EnsemblGenomes-Tr:CAL12287,GOA:A1JQ09,InterPro:IPR002645,InterPro:IPR011547,UniProtKB/TrEMBL:A1JQ09,NCBI_GP:CAL12287.1;Name=CAL12287.1;Note=Similar to Vibrio cholerae sulfate permease family protein Vca0103 SWALL:Q9KN62 (EMBL:AE004353) (592 aa) fasta scores: E(): 7e-123%2C 57.81 38d in 550 aa and to Synechocystis sp. high affinity sulfate transporter Slr1776 SWALL:P72770 (EMBL:D90900) (566 aa) fasta scores: E(): 2.3e-47%2C 32.11 38d in 520 aa;gbkey=CDS;inference=similar to sequence:INSDC:D90900;product=putative sulfate permease;protein_id=CAL12287.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2430012	2430356	.	-	.	ID=id4013;Note=Pfam match to entry PF01740 STAS%2C STAS domain %2Cscore 46.6%2C E-value 3.7e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF01740
AM286415.1	EMBL	sequence_feature	2430411	2431307	.	-	.	ID=id4014;Note=Pfam match to entry PF00916 Sulfate_transp%2C Sulfate transporter family%2C score 217.0%2C E-value 1.8e-62;gbkey=misc_feature;inference=protein motif:PFAM:PF00916
AM286415.1	EMBL	sequence_feature	2431533	2431586	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	2431455	2431523	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	2431374	2431442	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	2431308	2431364	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	2431215	2431274	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	2431062	2431121	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	2430975	2431043	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	2430849	2430917	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	2430633	2430686	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	2430555	2430623	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	2430450	2430518	.	-	.	ID=id4015;Note=11 probable transmembrane helices predicted for YE2219 by TMHMM2.0 at aa 28-45%2C 49-71%2C 76-98%2C 102-120%2C132-151%2C 183-202%2C 209-231%2C 251-273%2C 328-345%2C 349-371 and 384-406;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	2431488	2431520	.	-	.	ID=id4016;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2431898	2432440	.	+	.	ID=gene2188;Name=ispZ;gbkey=Gene;gene=ispZ;gene_biotype=protein_coding;gene_synonym=ispA;locus_tag=YE2220
AM286415.1	EMBL	CDS	2431898	2432440	.	+	0	ID=cds2119;Parent=gene2188;Dbxref=EnsemblGenomes-Gn:YE2220,EnsemblGenomes-Tr:CAL12288,GOA:A1JQ17,InterPro:IPR006008,NCBI_GP:CAL12288.1;Name=CAL12288.1;gbkey=CDS;gene=ispZ;product=putative intracellular septation protein;protein_id=CAL12288.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2431955	2432023	.	+	.	ID=id4017;Note=5 probable transmembrane helices predicted for YE2220 by TMHMM2.0 at aa 20-42%2C 51-68%2C 78-95%2C 119-141 and 151-170;gbkey=misc_feature;gene=ispZ;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2432048	2432101	.	+	.	ID=id4017;Note=5 probable transmembrane helices predicted for YE2220 by TMHMM2.0 at aa 20-42%2C 51-68%2C 78-95%2C 119-141 and 151-170;gbkey=misc_feature;gene=ispZ;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2432129	2432182	.	+	.	ID=id4017;Note=5 probable transmembrane helices predicted for YE2220 by TMHMM2.0 at aa 20-42%2C 51-68%2C 78-95%2C 119-141 and 151-170;gbkey=misc_feature;gene=ispZ;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2432252	2432320	.	+	.	ID=id4017;Note=5 probable transmembrane helices predicted for YE2220 by TMHMM2.0 at aa 20-42%2C 51-68%2C 78-95%2C 119-141 and 151-170;gbkey=misc_feature;gene=ispZ;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2432348	2432407	.	+	.	ID=id4017;Note=5 probable transmembrane helices predicted for YE2220 by TMHMM2.0 at aa 20-42%2C 51-68%2C 78-95%2C 119-141 and 151-170;gbkey=misc_feature;gene=ispZ;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	2432556	2432930	.	+	.	ID=gene2189;Name=YE2221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2221
AM286415.1	EMBL	CDS	2432556	2432930	.	+	0	ID=cds2120;Parent=gene2189;Dbxref=EnsemblGenomes-Gn:YE2221,EnsemblGenomes-Tr:CAL12289,GOA:A1JQ20,InterPro:IPR006683,InterPro:IPR029069,UniProtKB/TrEMBL:A1JQ20,NCBI_GP:CAL12289.1;Name=CAL12289.1;gbkey=CDS;product=putative acyl-CoA thioester hydrolase;protein_id=CAL12289.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2432556	2432891	.	+	.	ID=id4018;Note=Pfam match to entry PF01662 Acyl-CoA_hydro%2CCytosolic long-chain acyl-CoA thioester hydrolase%2C score 158.8%2C E-value 6e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF01662
AM286415.1	EMBL	gene	2433026	2433787	.	-	.	ID=gene2190;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=YE2222
AM286415.1	EMBL	CDS	2433026	2433787	.	-	0	ID=cds2121;Parent=gene2190;Dbxref=EnsemblGenomes-Gn:YE2222,EnsemblGenomes-Tr:CAL12290,GOA:A1JQ23,InterPro:IPR003538,InterPro:IPR006260,UniProtKB/TrEMBL:A1JQ23,NCBI_GP:CAL12290.1;Name=CAL12290.1;gbkey=CDS;gene=tonB;product=TonB protein;protein_id=CAL12290.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2433161	2433265	.	-	.	ID=id4019;Note=Pfam match to entry PF03544 TonB%2C Gram-negative bacterial tonB protein%2C score 65.1%2C E-value 9.7e-17;gbkey=misc_feature;gene=tonB;inference=protein motif:PFAM:PF03544
AM286415.1	EMBL	sequence_feature	2433686	2433754	.	-	.	ID=id4020;Note=1 probable transmembrane helix predicted for YE2222 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;gene=tonB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2434095	2434391	.	+	.	ID=gene2191;Name=YE2223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2223
AM286415.1	EMBL	CDS	2434095	2434391	.	+	0	ID=cds2122;Parent=gene2191;Dbxref=EnsemblGenomes-Gn:YE2223,EnsemblGenomes-Tr:CAL12291,InterPro:IPR005545,InterPro:IPR011008,UniProtKB/TrEMBL:A1JQ30,NCBI_GP:CAL12291.1;Name=CAL12291.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12291.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2434119	2434388	.	+	.	ID=id4021;Note=Pfam match to entry PF03795 YCII%2C YCII-related domain%2C score 158.7%2C E-value 6.5e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF03795
AM286415.1	EMBL	sequence_feature	2434335	2434367	.	+	.	ID=id4022;Note=PS00626 Regulator of chromosome condensation (RCC1) signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00626
AM286415.1	EMBL	gene	2434593	2434856	.	-	.	ID=gene2192;Name=YE2224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2224
AM286415.1	EMBL	CDS	2434593	2434856	.	-	0	ID=cds2123;Parent=gene2192;Dbxref=EnsemblGenomes-Gn:YE2224,EnsemblGenomes-Tr:CAL12292,UniProtKB/TrEMBL:A1JQ35,NCBI_GP:CAL12292.1;Name=CAL12292.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12292.1;transl_table=11
AM286415.1	EMBL	gene	2435008	2435730	.	-	.	ID=gene2193;Name=YE2225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2225
AM286415.1	EMBL	CDS	2435008	2435730	.	-	0	ID=cds2124;Parent=gene2193;Dbxref=EnsemblGenomes-Gn:YE2225,EnsemblGenomes-Tr:CAL12293,InterPro:IPR001633,UniProtKB/TrEMBL:A1JQ37,NCBI_GP:CAL12293.1;Name=CAL12293.1;Note=Similar to many proteins of undefined function including: Yersinia pestis hypothetical protein Ypo2779 SWALL:Q8ZD14 (EMBL:AJ414153) (232 aa) fasta scores: E(): 2.7e-44%2C 48.06 38d in 233 aa%2C and to Salmonella typhi hypothetical protein Sty1354 SWALL:Q8Z7C5 (EMBL:AL627270) (235 aa) fasta scores: E(): 8.2e-21%2C 33.79 38d in 219 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627270;product=conserved hypothetical protein;protein_id=CAL12293.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2435047	2435724	.	-	.	ID=id4023;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score -60.9%2C E-value 7.6e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	gene	2436800	2438260	.	+	.	ID=gene2194;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;gene_synonym=nov;locus_tag=YE2227
AM286415.1	EMBL	CDS	2436800	2438260	.	+	0	ID=cds2125;Parent=gene2194;Dbxref=EnsemblGenomes-Gn:YE2227,EnsemblGenomes-Tr:CAL12294,GOA:A1JQ40,InterPro:IPR001736,InterPro:IPR022924,InterPro:IPR025202,InterPro:IPR027379,NCBI_GP:CAL12294.1;Name=CAL12294.1;gbkey=CDS;gene=cls;product=cardiolipin synthetase;protein_id=CAL12294.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2436827	2436886	.	+	.	ID=id4024;Note=2 probable transmembrane helices predicted for YE2227 by TMHMM2.0 at aa 10-29 and 36-58;gbkey=misc_feature;gene=cls;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2436905	2436973	.	+	.	ID=id4024;Note=2 probable transmembrane helices predicted for YE2227 by TMHMM2.0 at aa 10-29 and 36-58;gbkey=misc_feature;gene=cls;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2437454	2437537	.	+	.	ID=id4025;Note=Pfam match to entry PF00614 PLDc%2C Phospholipase D. Active site motif%2C score 31.8%2C E-value 1e-06;gbkey=misc_feature;gene=cls;inference=protein motif:PFAM:PF00614
AM286415.1	EMBL	sequence_feature	2437601	2437633	.	+	.	ID=id4026;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cls;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2437994	2438077	.	+	.	ID=id4027;Note=Pfam match to entry PF00614 PLDc%2C Phospholipase D. Active site motif%2C score 32.9%2C E-value 4.9e-07;gbkey=misc_feature;gene=cls;inference=protein motif:PFAM:PF00614
AM286415.1	EMBL	gene	2438395	2438718	.	+	.	ID=gene2195;Name=YE2228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2228
AM286415.1	EMBL	CDS	2438395	2438718	.	+	0	ID=cds2126;Parent=gene2195;Dbxref=EnsemblGenomes-Gn:YE2228,EnsemblGenomes-Tr:CAL12295,InterPro:IPR007376,NCBI_GP:CAL12295.1;Name=CAL12295.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12295.1;transl_table=11
AM286415.1	EMBL	gene	2438864	2439865	.	-	.	ID=gene2196;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=YE2229
AM286415.1	EMBL	CDS	2438864	2439865	.	-	0	ID=cds2127;Parent=gene2196;Dbxref=EnsemblGenomes-Gn:YE2229,EnsemblGenomes-Tr:CAL12296,GOA:A1JQ49,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010066,InterPro:IPR013563,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ49,NCBI_GP:CAL12296.1;Name=CAL12296.1;gbkey=CDS;gene=oppF;product=oligopeptide transport ATP-binding protein;protein_id=CAL12296.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2439146	2439721	.	-	.	ID=id4028;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 225.8%2C E-value 4.1e-65;gbkey=misc_feature;gene=oppF;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2439332	2439376	.	-	.	ID=id4029;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=oppF;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2439677	2439700	.	-	.	ID=id4030;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=oppF;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2439862	2440863	.	-	.	ID=gene2197;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=YE2230
AM286415.1	EMBL	CDS	2439862	2440863	.	-	0	ID=cds2128;Parent=gene2197;Dbxref=EnsemblGenomes-Gn:YE2230,EnsemblGenomes-Tr:CAL12297,GOA:A1JQ57,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010066,InterPro:IPR013563,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ57,NCBI_GP:CAL12297.1;Name=CAL12297.1;gbkey=CDS;gene=oppD;product=oligopeptide transport ATP-binding protein;protein_id=CAL12297.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2440141	2440731	.	-	.	ID=id4031;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 217.3%2C E-value 1.4e-62;gbkey=misc_feature;gene=oppD;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2440327	2440371	.	-	.	ID=id4032;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=oppD;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2440687	2440710	.	-	.	ID=id4033;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=oppD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2440875	2441780	.	-	.	ID=gene2198;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=YE2231
AM286415.1	EMBL	CDS	2440875	2441780	.	-	0	ID=cds2129;Parent=gene2198;Dbxref=EnsemblGenomes-Gn:YE2231,EnsemblGenomes-Tr:CAL12298,GOA:A1JQ61,InterPro:IPR000515,InterPro:IPR025966,UniProtKB/TrEMBL:A1JQ61,NCBI_GP:CAL12298.1;Name=CAL12298.1;gbkey=CDS;gene=oppC;product=oligopeptide transport system permease protein;protein_id=CAL12298.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2441598	2441666	.	-	.	ID=id4034;Note=6 probable transmembrane helices predicted for YE2231 by TMHMM2.0 at aa 39-61%2C 102-124%2C 137-159%2C 163-182%2C213-235 and 267-289;gbkey=misc_feature;gene=oppC;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2441409	2441477	.	-	.	ID=id4034;Note=6 probable transmembrane helices predicted for YE2231 by TMHMM2.0 at aa 39-61%2C 102-124%2C 137-159%2C 163-182%2C213-235 and 267-289;gbkey=misc_feature;gene=oppC;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2441304	2441372	.	-	.	ID=id4034;Note=6 probable transmembrane helices predicted for YE2231 by TMHMM2.0 at aa 39-61%2C 102-124%2C 137-159%2C 163-182%2C213-235 and 267-289;gbkey=misc_feature;gene=oppC;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2441235	2441294	.	-	.	ID=id4034;Note=6 probable transmembrane helices predicted for YE2231 by TMHMM2.0 at aa 39-61%2C 102-124%2C 137-159%2C 163-182%2C213-235 and 267-289;gbkey=misc_feature;gene=oppC;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2441076	2441144	.	-	.	ID=id4034;Note=6 probable transmembrane helices predicted for YE2231 by TMHMM2.0 at aa 39-61%2C 102-124%2C 137-159%2C 163-182%2C213-235 and 267-289;gbkey=misc_feature;gene=oppC;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2440914	2440982	.	-	.	ID=id4034;Note=6 probable transmembrane helices predicted for YE2231 by TMHMM2.0 at aa 39-61%2C 102-124%2C 137-159%2C 163-182%2C213-235 and 267-289;gbkey=misc_feature;gene=oppC;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	2440995	2441225	.	-	.	ID=id4035;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 30.0%2C E-value 3.6e-06;gbkey=misc_feature;gene=oppC;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	2441136	2441222	.	-	.	ID=id4036;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=oppC;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	2441799	2442719	.	-	.	ID=gene2199;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=YE2232
AM286415.1	EMBL	CDS	2441799	2442719	.	-	0	ID=cds2130;Parent=gene2199;Dbxref=EnsemblGenomes-Gn:YE2232,EnsemblGenomes-Tr:CAL12299,GOA:A1JQ66,InterPro:IPR000515,UniProtKB/TrEMBL:A1JQ66,NCBI_GP:CAL12299.1;Name=CAL12299.1;gbkey=CDS;gene=oppB;product=oligopeptide transport system permease protein;protein_id=CAL12299.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2442630	2442683	.	-	.	ID=id4037;Note=6 probable transmembrane helices predicted for YE2232 by TMHMM2.0 at aa 13-30%2C 101-123%2C 136-158%2C 173-190%2C228-250 and 278-300;gbkey=misc_feature;gene=oppB;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2442351	2442419	.	-	.	ID=id4037;Note=6 probable transmembrane helices predicted for YE2232 by TMHMM2.0 at aa 13-30%2C 101-123%2C 136-158%2C 173-190%2C228-250 and 278-300;gbkey=misc_feature;gene=oppB;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2442246	2442314	.	-	.	ID=id4037;Note=6 probable transmembrane helices predicted for YE2232 by TMHMM2.0 at aa 13-30%2C 101-123%2C 136-158%2C 173-190%2C228-250 and 278-300;gbkey=misc_feature;gene=oppB;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2442150	2442203	.	-	.	ID=id4037;Note=6 probable transmembrane helices predicted for YE2232 by TMHMM2.0 at aa 13-30%2C 101-123%2C 136-158%2C 173-190%2C228-250 and 278-300;gbkey=misc_feature;gene=oppB;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2441970	2442038	.	-	.	ID=id4037;Note=6 probable transmembrane helices predicted for YE2232 by TMHMM2.0 at aa 13-30%2C 101-123%2C 136-158%2C 173-190%2C228-250 and 278-300;gbkey=misc_feature;gene=oppB;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2441820	2441888	.	-	.	ID=id4037;Note=6 probable transmembrane helices predicted for YE2232 by TMHMM2.0 at aa 13-30%2C 101-123%2C 136-158%2C 173-190%2C228-250 and 278-300;gbkey=misc_feature;gene=oppB;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	2441916	2442131	.	-	.	ID=id4038;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 29.4%2C E-value 5.5e-06;gbkey=misc_feature;gene=oppB;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	2442042	2442128	.	-	.	ID=id4039;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=oppB;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	2442804	2444441	.	-	.	ID=gene2200;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=YE2233
AM286415.1	EMBL	CDS	2442804	2444441	.	-	0	ID=cds2131;Parent=gene2200;Dbxref=EnsemblGenomes-Gn:YE2233,EnsemblGenomes-Tr:CAL12300,GOA:A1JQ72,InterPro:IPR000914,InterPro:IPR023765,UniProtKB/TrEMBL:A1JQ72,NCBI_GP:CAL12300.1;Name=CAL12300.1;gbkey=CDS;gene=oppA;product=periplasmic oligopeptide-binding protein precursor;protein_id=CAL12300.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2442816	2444411	.	-	.	ID=id4040;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 802.0%2C E-value 1.5e-238;gbkey=misc_feature;gene=oppA;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	sequence_feature	2444112	2444177	.	-	.	ID=id4041;Note=PS01040 Bacterial extracellular solute-binding proteins%2C family 5 signature.;gbkey=misc_feature;gene=oppA;inference=protein motif:Prosite:PS01040
AM286415.1	EMBL	sequence_feature	2444349	2444417	.	-	.	ID=id4042;Note=1 probable transmembrane helix predicted for YE2233 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;gene=oppA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2444670	2446385	.	-	.	ID=gene2201;Name=oppA2;gbkey=Gene;gene=oppA2;gene_biotype=protein_coding;locus_tag=YE2234
AM286415.1	EMBL	CDS	2444670	2446385	.	-	0	ID=cds2132;Parent=gene2201;Dbxref=EnsemblGenomes-Gn:YE2234,EnsemblGenomes-Tr:CAL12301,GOA:A1JQ77,InterPro:IPR000914,UniProtKB/TrEMBL:A1JQ77,NCBI_GP:CAL12301.1;Name=CAL12301.1;Note=Similar to Escherichia coli periplasmic oligopeptide-binding protein precursor OppA or b1243 SWALL:OPPA_ECOLI (SWALL:P23843) (543 aa) fasta scores: E(): 6.4e-140%2C 62.43 38d in 535 aa and to Haemophilus influenzae periplasmic oligopeptide-binding protein precursor OppA or Hi1124 SWALL:OPPA_HAEIN (SWALL:P71370) (541 aa) fasta scores: E(): 1.8e-111%2C 51.2 38d in 539 aa. Note this CDS is also highly similar to YE2233 64.991 identity in 537 aa overlap.;gbkey=CDS;gene=oppA2;inference=similar to sequence:UniProtKB:P71370;product=periplasmic oligopeptide-binding protein precursor;protein_id=CAL12301.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2444685	2446265	.	-	.	ID=id4043;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 566.1%2C E-value 1.5e-167;gbkey=misc_feature;gene=oppA2;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	gene	2447238	2447882	.	-	.	ID=gene2202;Name=YE2237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2237
AM286415.1	EMBL	CDS	2447238	2447882	.	-	0	ID=cds2133;Parent=gene2202;Dbxref=EnsemblGenomes-Gn:YE2237,EnsemblGenomes-Tr:CAL12302,GOA:A1JQ81,InterPro:IPR002771,UniProtKB/TrEMBL:A1JQ81,NCBI_GP:CAL12302.1;Name=CAL12302.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12302.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2447787	2447855	.	-	.	ID=id4044;Note=6 probable transmembrane helices predicted for YE2237 by TMHMM2.0 at aa 10-32%2C 52-74%2C 78-97%2C 118-140%2C150-168 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2447661	2447729	.	-	.	ID=id4044;Note=6 probable transmembrane helices predicted for YE2237 by TMHMM2.0 at aa 10-32%2C 52-74%2C 78-97%2C 118-140%2C150-168 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2447592	2447651	.	-	.	ID=id4044;Note=6 probable transmembrane helices predicted for YE2237 by TMHMM2.0 at aa 10-32%2C 52-74%2C 78-97%2C 118-140%2C150-168 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2447463	2447531	.	-	.	ID=id4044;Note=6 probable transmembrane helices predicted for YE2237 by TMHMM2.0 at aa 10-32%2C 52-74%2C 78-97%2C 118-140%2C150-168 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2447379	2447435	.	-	.	ID=id4044;Note=6 probable transmembrane helices predicted for YE2237 by TMHMM2.0 at aa 10-32%2C 52-74%2C 78-97%2C 118-140%2C150-168 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2447250	2447318	.	-	.	ID=id4044;Note=6 probable transmembrane helices predicted for YE2237 by TMHMM2.0 at aa 10-32%2C 52-74%2C 78-97%2C 118-140%2C150-168 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	2447253	2447861	.	-	.	ID=id4045;Note=Pfam match to entry PF01914 MarC%2C MarC family integral membrane protein%2C score 346.5%2C E-value 2e-101;gbkey=misc_feature;inference=protein motif:PFAM:PF01914
AM286415.1	EMBL	gene	2448583	2451258	.	+	.	ID=gene2203;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=ana;locus_tag=YE2238
AM286415.1	EMBL	CDS	2448583	2451258	.	+	0	ID=cds2134;Parent=gene2203;Dbxref=EnsemblGenomes-Gn:YE2238,EnsemblGenomes-Tr:CAL12303,GOA:A1JQ89,InterPro:IPR001670,InterPro:IPR012079,InterPro:IPR015590,InterPro:IPR016161,InterPro:IPR016162,InterPro:IPR016163,InterPro:IPR018211,UniProtKB/TrEMBL:A1JQ89,NCBI_GP:CAL12303.1;Name=CAL12303.1;gbkey=CDS;gene=adhE;product=aldehyde-alcohol dehydrogenase;protein_id=CAL12303.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2448586	2449926	.	+	.	ID=id4046;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score -191.2%2C E-value 4.7e-07;gbkey=misc_feature;gene=adhE;inference=protein motif:PFAM:PF00171
AM286415.1	EMBL	sequence_feature	2449951	2451144	.	+	.	ID=id4047;Note=Pfam match to entry PF00465 Fe-ADH%2C Iron-containing alcohol dehydrogenase%2C score 763.7%2C E-value 4.8e-227;gbkey=misc_feature;gene=adhE;inference=protein motif:PFAM:PF00465
AM286415.1	EMBL	sequence_feature	2450476	2450562	.	+	.	ID=id4048;Note=PS00913 Iron-containing alcohol dehydrogenases signature 1.;gbkey=misc_feature;gene=adhE;inference=protein motif:Prosite:PS00913
AM286415.1	EMBL	sequence_feature	2450740	2450802	.	+	.	ID=id4049;Note=PS00060 Iron-containing alcohol dehydrogenases signature 2.;gbkey=misc_feature;gene=adhE;inference=protein motif:Prosite:PS00060
AM286415.1	EMBL	sequence_feature	2450899	2450964	.	+	.	ID=id4050;Note=Predicted helix-turn-helix motif with score 1036.000%2C SD 2.72 at aa 773-794%2C sequence RRYAEIADHLGLSAPGDRTAQK;gbkey=misc_feature;gene=adhE
AM286415.1	EMBL	gene	2451758	2452357	.	-	.	ID=gene2204;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=YE2239
AM286415.1	EMBL	CDS	2451758	2452357	.	-	0	ID=cds2135;Parent=gene2204;Dbxref=EnsemblGenomes-Gn:YE2239,EnsemblGenomes-Tr:CAL12304,GOA:A1JQ93,InterPro:IPR001267,InterPro:IPR020633,InterPro:IPR020634,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ93,NCBI_GP:CAL12304.1;Name=CAL12304.1;gbkey=CDS;gene=tdk;product=thymidine kinase;protein_id=CAL12304.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2451800	2452354	.	-	.	ID=id4051;Note=Pfam match to entry PF00265 TK%2C Thymidine kinase %2Cscore 310.9%2C E-value 1e-90;gbkey=misc_feature;gene=tdk;inference=protein motif:PFAM:PF00265
AM286415.1	EMBL	sequence_feature	2451800	2451841	.	-	.	ID=id4052;Note=PS00603 Thymidine kinase cellular-type signature.;gbkey=misc_feature;gene=tdk;inference=protein motif:Prosite:PS00603
AM286415.1	EMBL	gene	2452327	2452599	.	+	.	ID=gene2205;Name=YE2240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2240
AM286415.1	EMBL	CDS	2452327	2452599	.	+	0	ID=cds2136;Parent=gene2205;Dbxref=EnsemblGenomes-Gn:YE2240,EnsemblGenomes-Tr:CAL12305,UniProtKB/TrEMBL:A1JQ98,NCBI_GP:CAL12305.1;Name=CAL12305.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12305.1;transl_table=11
AM286415.1	EMBL	gene	2453110	2453520	.	+	.	ID=gene2206;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;gene_synonym=bglY,cur,drdX,hnsA,msyA,osmZ,pilG,topS;locus_tag=YE2241
AM286415.1	EMBL	CDS	2453110	2453520	.	+	0	ID=cds2137;Parent=gene2206;Dbxref=EnsemblGenomes-Gn:YE2241,EnsemblGenomes-Tr:CAL12306,GOA:A1JQA0,InterPro:IPR001801,InterPro:IPR027444,InterPro:IPR027454,UniProtKB/TrEMBL:A1JQA0,NCBI_GP:CAL12306.1;Name=CAL12306.1;gbkey=CDS;gene=hns;product=DNA-binding protein Hns;protein_id=CAL12306.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2453110	2453502	.	+	.	ID=id4053;Note=Pfam match to entry PF00816 Histone_HNS%2C H-NS histone family%2C score 311.1%2C E-value 8.7e-91;gbkey=misc_feature;gene=hns;inference=protein motif:PFAM:PF00816
AM286415.1	EMBL	sequence_feature	2453476	2453499	.	+	.	ID=id4054;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=hns;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2453903	2455252	.	-	.	ID=gene2207;Name=YE2242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2242
AM286415.1	EMBL	CDS	2453903	2455252	.	-	0	ID=cds2138;Parent=gene2207;Dbxref=EnsemblGenomes-Gn:YE2242,EnsemblGenomes-Tr:CAL12307,GOA:A1JQA1,InterPro:IPR001732,InterPro:IPR008927,InterPro:IPR014026,InterPro:IPR014027,InterPro:IPR016040,InterPro:IPR017476,InterPro:IPR028357,UniProtKB/TrEMBL:A1JQA1,NCBI_GP:CAL12307.1;Name=CAL12307.1;gbkey=CDS;product=putative nucleotide sugar dehydrogenase;protein_id=CAL12307.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2453975	2454289	.	-	.	ID=id4055;Note=Pfam match to entry PF03720 UDPG_MGDP_dh_C%2CUDP-glucose/GDP-mannose dehydrogenase family%2C UDP binding domain%2C score 118.6%2C E-value 7.6e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF03720
AM286415.1	EMBL	sequence_feature	2454353	2454640	.	-	.	ID=id4056;Note=Pfam match to entry PF00984 UDPG_MGDP_dh%2CUDP-glucose/GDP-mannose dehydrogenase family%2C central domain%2C score 166.8%2C E-value 2.4e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF00984
AM286415.1	EMBL	sequence_feature	2454668	2455252	.	-	.	ID=id4057;Note=Pfam match to entry PF03721 UDPG_MGDP_dh_N%2CUDP-glucose/GDP-mannose dehydrogenase family%2C NAD binding domain%2C score 279.6%2C E-value 2.7e-81;gbkey=misc_feature;inference=protein motif:PFAM:PF03721
AM286415.1	EMBL	gene	2455574	2456590	.	-	.	ID=gene2208;Name=YE2243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2243
AM286415.1	EMBL	CDS	2455574	2456590	.	-	0	ID=cds2139;Parent=gene2208;Dbxref=EnsemblGenomes-Gn:YE2243,EnsemblGenomes-Tr:CAL12308,GOA:A1JQA6,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR028616,UniProtKB/TrEMBL:A1JQA6,NCBI_GP:CAL12308.1;Name=CAL12308.1;gbkey=CDS;product=probable response regulator;protein_id=CAL12308.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2456207	2456569	.	-	.	ID=id4058;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 100.8%2C E-value 1.7e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	2456692	2457594	.	-	.	ID=gene2209;Name=YE2244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2244
AM286415.1	EMBL	CDS	2456692	2457594	.	-	0	ID=cds2140;Parent=gene2209;Dbxref=EnsemblGenomes-Gn:YE2244,EnsemblGenomes-Tr:CAL12309,GOA:A1JQA9,InterPro:IPR002641,InterPro:IPR016035,UniProtKB/TrEMBL:A1JQA9,NCBI_GP:CAL12309.1;Name=CAL12309.1;Note=Similar to many including: Salmonella typhimurium putative phosphoesterase YchK or Stm1754 SWALL:Q8ZP44 (EMBL:AE008778) (301 aa) fasta scores: E(): 1.6e-79%2C67.78 38d in 298 aa%2C Escherichia coli O157:H7 orf%2Chypothetical protein YchK or z2010 or ecs1736 SWALL:Q8XDB1 (EMBL:AE005340) (314 aa) fasta scores: E(): 2.5e-79%2C67.78 38d in 298 aa and Salmonella typhi hypothetical protein Sty1296 sty1296 SWALL:Q8Z7F2 (EMBL:AL627269) (301 aa) fasta scores: E(): 1.6e-78%2C 67.11 38d in 298 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627269;product=putative exported protein;protein_id=CAL12309.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2457091	2457573	.	-	.	ID=id4059;Note=Pfam match to entry PF01734 Patatin%2C Patatin-like phospholipase%2C score 184.1%2C E-value 1.5e-52;gbkey=misc_feature;inference=protein motif:PFAM:PF01734
AM286415.1	EMBL	gene	2457914	2458324	.	+	.	ID=gene2210;Name=YE2245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2245
AM286415.1	EMBL	CDS	2457914	2458324	.	+	0	ID=cds2141;Parent=gene2210;Dbxref=EnsemblGenomes-Gn:YE2245,EnsemblGenomes-Tr:CAL12310,GOA:A1JQB3,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JQB3,NCBI_GP:CAL12310.1;Name=CAL12310.1;Note=Weakly similar to several acetyltransferases including: Rhizobium meliloti putative acetyltransferase protein R01432 or Smc01017 SWALL:Q92QA6 (EMBL:AL591787) (156 aa) fasta scores: E(): 1.9e-11%2C 38.33 38d in 120 aa and to Azospirillum brasilense Iaa acetyltransferase SWALL:IAAT_AZOBR (SWALL:P26945) (153 aa) fasta scores: E(): 5.7e-11%2C 38.01 38d in 121 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P26945;product=hypothetical protein;protein_id=CAL12310.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2458070	2458237	.	+	.	ID=id4060;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 25.2%2C E-value 0.0001;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	2458963	2459427	.	+	.	ID=gene2211;Name=YE2246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2246
AM286415.1	EMBL	CDS	2458963	2459427	.	+	0	ID=cds2142;Parent=gene2211;Dbxref=EnsemblGenomes-Gn:YE2246,EnsemblGenomes-Tr:CAL12311,InterPro:IPR004027,InterPro:IPR023006,NCBI_GP:CAL12311.1;Name=CAL12311.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12311.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2458963	2459025	.	+	.	ID=id4061;Note=Pfam match to entry PF02810 SEC-C%2C SEC-C motif %2Cscore 28.7%2C E-value 9.1e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF02810
AM286415.1	EMBL	sequence_feature	2459368	2459424	.	+	.	ID=id4062;Note=Pfam match to entry PF02810 SEC-C%2C SEC-C motif %2Cscore 29.5%2C E-value 5.2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF02810
AM286415.1	EMBL	gene	2459509	2460357	.	+	.	ID=gene2212;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;gene_synonym=tgs;locus_tag=YE2247
AM286415.1	EMBL	CDS	2459509	2460357	.	+	0	ID=cds2143;Parent=gene2212;Dbxref=EnsemblGenomes-Gn:YE2247,EnsemblGenomes-Tr:CAL12312,GOA:A1JQC3,InterPro:IPR002376,InterPro:IPR002912,InterPro:IPR004810,UniProtKB/TrEMBL:A1JQC3,NCBI_GP:CAL12312.1;Name=CAL12312.1;gbkey=CDS;gene=purU;product=formyltetrahydrofolate deformylase;protein_id=CAL12312.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2459533	2459754	.	+	.	ID=id4063;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 29.4%2C E-value 5.6e-06;gbkey=misc_feature;gene=purU;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	sequence_feature	2459767	2460300	.	+	.	ID=id4064;Note=Pfam match to entry PF00551 formyl_transf%2C Formyl transferase%2C score 246.6%2C E-value 2.2e-71;gbkey=misc_feature;gene=purU;inference=protein motif:PFAM:PF00551
AM286415.1	EMBL	sequence_feature	2459839	2459880	.	+	.	ID=id4065;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;gbkey=misc_feature;gene=purU;inference=protein motif:Prosite:PS01039
AM286415.1	EMBL	gene	2460533	2460617	.	+	.	ID=gene2213;Name=tRNA-Tyr (GTA);gbkey=Gene;gene=tRNA-Tyr (GTA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2460533	2460617	.	+	.	ID=rna91;Parent=gene2213;gbkey=tRNA;gene=tRNA-Tyr (GTA);product=tRNA-Tyr
AM286415.1	EMBL	exon	2460533	2460617	.	+	.	ID=id4066;Parent=rna91;gbkey=tRNA;gene=tRNA-Tyr (GTA);product=tRNA-Tyr
AM286415.1	EMBL	transcript	2460631	2460791	.	+	.	ID=rna92;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 96.15%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	exon	2460631	2460791	.	+	.	ID=id4067;Parent=rna92;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 96.15%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	transcript	2460805	2460965	.	+	.	ID=rna93;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 100.47%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	exon	2460805	2460965	.	+	.	ID=id4068;Parent=rna93;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 100.47%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	transcript	2460979	2461139	.	+	.	ID=rna94;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 100.47%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	exon	2460979	2461139	.	+	.	ID=id4069;Parent=rna94;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 100.47%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	transcript	2461153	2461313	.	+	.	ID=rna95;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 96.15%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	exon	2461153	2461313	.	+	.	ID=id4070;Parent=rna95;Note=RtT RNA (RF00391) as predicted by Rfam%2C score 96.15%2C positions 1 to 171;gbkey=misc_RNA
AM286415.1	EMBL	gene	2461446	2462306	.	-	.	ID=gene2214;Name=YE2253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2253
AM286415.1	EMBL	CDS	2461446	2462306	.	-	0	ID=cds2144;Parent=gene2214;Dbxref=EnsemblGenomes-Gn:YE2253,EnsemblGenomes-Tr:CAL12313,GOA:A1JQD1,InterPro:IPR000847,InterPro:IPR011991,UniProtKB/TrEMBL:A1JQD1,NCBI_GP:CAL12313.1;Name=CAL12313.1;gbkey=CDS;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL12313.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2462118	2462297	.	-	.	ID=id4071;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 72.0%2C E-value 8e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2462163	2462255	.	-	.	ID=id4072;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	gene	2463086	2463892	.	+	.	ID=gene2215;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;gene_synonym=xth;locus_tag=YE2254
AM286415.1	EMBL	CDS	2463086	2463892	.	+	0	ID=cds2145;Parent=gene2215;Dbxref=EnsemblGenomes-Gn:YE2254,EnsemblGenomes-Tr:CAL12314,GOA:A1JQD3,InterPro:IPR004808,InterPro:IPR005135,InterPro:IPR020847,InterPro:IPR020848,UniProtKB/TrEMBL:A1JQD3,NCBI_GP:CAL12314.1;Name=CAL12314.1;gbkey=CDS;gene=xthA;product=exodeoxyribonuclease III;protein_id=CAL12314.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2463086	2463883	.	+	.	ID=id4073;Note=Pfam match to entry PF03372 Exo_endo_phos%2CEndonuclease/Exonuclease/phosphatase family%2C score 172.2%2CE-value 5.8e-49;gbkey=misc_feature;gene=xthA;inference=protein motif:PFAM:PF03372
AM286415.1	EMBL	sequence_feature	2463164	2463193	.	+	.	ID=id4074;Note=PS00726 AP endonucleases family 1 signature 1.;gbkey=misc_feature;gene=xthA;inference=protein motif:Prosite:PS00726
AM286415.1	EMBL	sequence_feature	2463752	2463787	.	+	.	ID=id4075;Note=PS00728 AP endonucleases family 1 signature 3.;gbkey=misc_feature;gene=xthA;inference=protein motif:Prosite:PS00728
AM286415.1	EMBL	gene	2463976	2464362	.	+	.	ID=gene2216;Name=nudG;gbkey=Gene;gene=nudG;gene_biotype=protein_coding;locus_tag=YE2255
AM286415.1	EMBL	CDS	2463976	2464362	.	+	0	ID=cds2146;Parent=gene2216;Dbxref=EnsemblGenomes-Gn:YE2255,EnsemblGenomes-Tr:CAL12315,GOA:A1JQD8,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR020476,UniProtKB/TrEMBL:A1JQD8,NCBI_GP:CAL12315.1;Name=CAL12315.1;gbkey=CDS;gene=nudG;product=putative pyrophosphohydrolase;protein_id=CAL12315.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2463976	2464353	.	+	.	ID=id4076;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 85.2%2C E-value 8.6e-23;gbkey=misc_feature;gene=nudG;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	sequence_feature	2464078	2464137	.	+	.	ID=id4077;Note=PS00893 mutT domain signature.;gbkey=misc_feature;gene=nudG;inference=protein motif:Prosite:PS00893
AM286415.1	EMBL	gene	2464367	2464657	.	-	.	ID=gene2217;Name=YE2256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2256
AM286415.1	EMBL	CDS	2464367	2464657	.	-	0	ID=cds2147;Parent=gene2217;Dbxref=EnsemblGenomes-Gn:YE2256,EnsemblGenomes-Tr:CAL12316,InterPro:IPR009971,UniProtKB/TrEMBL:A1JQE4,NCBI_GP:CAL12316.1;Name=CAL12316.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12316.1;transl_table=11
AM286415.1	EMBL	gene	2464654	2466582	.	-	.	ID=gene2218;Name=topB;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=YE2257
AM286415.1	EMBL	CDS	2464654	2466582	.	-	0	ID=cds2148;Parent=gene2218;Dbxref=EnsemblGenomes-Gn:YE2257,EnsemblGenomes-Tr:CAL12317,GOA:A1JQE7,InterPro:IPR000380,InterPro:IPR003601,InterPro:IPR003602,InterPro:IPR005738,InterPro:IPR006171,InterPro:IPR013497,InterPro:IPR013824,InterPro:IPR013825,InterPro:IPR023405,InterPro:IPR023406,UniProtKB/TrEMBL:A1JQE7,NCBI_GP:CAL12317.1;Name=CAL12317.1;gbkey=CDS;gene=topB;product=DNA topoisomerase III;protein_id=CAL12317.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2464888	2466129	.	-	.	ID=id4078;Note=Pfam match to entry PF01131 Topoisom_bac%2C DNA topoisomerase%2C score 602.5%2C E-value 1.6e-178;gbkey=misc_feature;gene=topB;inference=protein motif:PFAM:PF01131
AM286415.1	EMBL	sequence_feature	2465584	2465631	.	-	.	ID=id4079;Note=PS00396 Prokaryotic DNA topoisomerase I active site.;gbkey=misc_feature;gene=topB;inference=protein motif:Prosite:PS00396
AM286415.1	EMBL	sequence_feature	2465629	2465694	.	-	.	ID=id4080;Note=Predicted helix-turn-helix motif with score 1028.000%2C SD 2.69 at aa 297-318%2C sequence TLQIEAAKRFGLSAQQVLDICQ;gbkey=misc_feature;gene=topB
AM286415.1	EMBL	sequence_feature	2466175	2466579	.	-	.	ID=id4081;Note=Pfam match to entry PF01751 Toprim%2C Toprim domain %2Cscore 138.5%2C E-value 8e-39;gbkey=misc_feature;gene=topB;inference=protein motif:PFAM:PF01751
AM286415.1	EMBL	gene	2466626	2467672	.	-	.	ID=gene2219;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;gene_synonym=fdhB;locus_tag=YE2258
AM286415.1	EMBL	CDS	2466626	2467672	.	-	0	ID=cds2149;Parent=gene2219;Dbxref=EnsemblGenomes-Gn:YE2258,EnsemblGenomes-Tr:CAL12318,GOA:A1JQF1,InterPro:IPR000728,InterPro:IPR004536,InterPro:IPR010918,InterPro:IPR016188,InterPro:IPR023061,UniProtKB/TrEMBL:A1JQF1,NCBI_GP:CAL12318.1;Name=CAL12318.1;gbkey=CDS;gene=selD;product=selenide%2C water dikinase;protein_id=CAL12318.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2466638	2467168	.	-	.	ID=id4082;Note=Pfam match to entry PF02769 AIRS_C%2C AIR synthase related protein%2C C-terminal domain%2C score 85.5%2C E-value 7.1e-23;gbkey=misc_feature;gene=selD;inference=protein motif:PFAM:PF02769
AM286415.1	EMBL	sequence_feature	2467199	2467636	.	-	.	ID=id4083;Note=Pfam match to entry PF00586 AIRS%2C AIR synthase related protein%2C N-terminal domain%2C score 87.0%2C E-value 2.6e-23;gbkey=misc_feature;gene=selD;inference=protein motif:PFAM:PF00586
AM286415.1	EMBL	sequence_feature	2467616	2467648	.	-	.	ID=id4084;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=selD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2468002	2468553	.	-	.	ID=gene2220;Name=YE2259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2259
AM286415.1	EMBL	CDS	2468002	2468553	.	-	0	ID=cds2150;Parent=gene2220;Dbxref=EnsemblGenomes-Gn:YE2259,EnsemblGenomes-Tr:CAL12319,GOA:A1JQF4,InterPro:IPR000415,InterPro:IPR026021,InterPro:IPR029479,UniProtKB/TrEMBL:A1JQF4,NCBI_GP:CAL12319.1;Name=CAL12319.1;gbkey=CDS;product=putative nitroreductase;protein_id=CAL12319.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2468113	2468550	.	-	.	ID=id4085;Note=Pfam match to entry PF00881 Nitroreductase%2CNitroreductase family%2C score 111.7%2C E-value 9.1e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF00881
AM286415.1	EMBL	gene	2468716	2470566	.	+	.	ID=gene2221;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=YE2260
AM286415.1	EMBL	CDS	2468716	2470566	.	+	0	ID=cds2151;Parent=gene2221;Dbxref=EnsemblGenomes-Gn:YE2260,EnsemblGenomes-Tr:CAL12320,GOA:A1JQF7,InterPro:IPR002142,InterPro:IPR004634,InterPro:IPR004635,InterPro:IPR029045,UniProtKB/TrEMBL:A1JQF7,NCBI_GP:CAL12320.1;Name=CAL12320.1;gbkey=CDS;gene=sppA;product=protease IV;protein_id=CAL12320.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2468776	2468844	.	+	.	ID=id4086;Note=1 probable transmembrane helix predicted for YE2260 by TMHMM2.0 at aa 21-43;gbkey=misc_feature;gene=sppA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	2469127	2469597	.	+	.	ID=id4087;Note=Pfam match to entry PF01343 Peptidase_U7%2C Peptidase family U7%2C score 158.1%2C E-value 9.8e-45;gbkey=misc_feature;gene=sppA;inference=protein motif:PFAM:PF01343
AM286415.1	EMBL	sequence_feature	2469880	2470338	.	+	.	ID=id4088;Note=Pfam match to entry PF01343 Peptidase_U7%2C Peptidase family U7%2C score 227.0%2C E-value 1.8e-65;gbkey=misc_feature;gene=sppA;inference=protein motif:PFAM:PF01343
AM286415.1	EMBL	gene	2470810	2471826	.	+	.	ID=gene2222;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=YE2261
AM286415.1	EMBL	CDS	2470810	2471826	.	+	0	ID=cds2152;Parent=gene2222;Dbxref=EnsemblGenomes-Gn:YE2261,EnsemblGenomes-Tr:CAL12321,GOA:A1JQG0,InterPro:IPR006033,InterPro:IPR006034,InterPro:IPR020827,InterPro:IPR027473,InterPro:IPR027474,InterPro:IPR027475,UniProtKB/TrEMBL:A1JQG0,NCBI_GP:CAL12321.1;Name=CAL12321.1;gbkey=CDS;gene=ansA;product=L-asparaginase I;protein_id=CAL12321.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2470831	2470857	.	+	.	ID=id4089;Note=PS00144 Asparaginase / glutaminase active site signature 1.;gbkey=misc_feature;gene=ansA;inference=protein motif:Prosite:PS00144
AM286415.1	EMBL	sequence_feature	2470837	2471781	.	+	.	ID=id4090;Note=Pfam match to entry PF00710 Asparaginase%2CAsparaginase%2C score 409.9%2C E-value 1.6e-120;gbkey=misc_feature;gene=ansA;inference=protein motif:PFAM:PF00710
AM286415.1	EMBL	sequence_feature	2471059	2471091	.	+	.	ID=id4091;Note=PS00917 Asparaginase / glutaminase active site signature 2.;gbkey=misc_feature;gene=ansA;inference=protein motif:Prosite:PS00917
AM286415.1	EMBL	gene	2471842	2472495	.	+	.	ID=gene2223;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;gene_synonym=nam;locus_tag=YE2262
AM286415.1	EMBL	CDS	2471842	2472495	.	+	0	ID=cds2153;Parent=gene2223;Dbxref=EnsemblGenomes-Gn:YE2262,EnsemblGenomes-Tr:CAL12322,GOA:A1JQG4,InterPro:IPR000868,UniProtKB/TrEMBL:A1JQG4,NCBI_GP:CAL12322.1;Name=CAL12322.1;gbkey=CDS;gene=pncA;product=putative pyrazinamidase/nicotinamidase;protein_id=CAL12322.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2471845	2472465	.	+	.	ID=id4092;Note=Pfam match to entry PF00857 Isochorismatase%2CIsochorismatase family%2C score 168.9%2C E-value 5.6e-48;gbkey=misc_feature;gene=pncA;inference=protein motif:PFAM:PF00857
AM286415.1	EMBL	gene	2472570	2472842	.	-	.	ID=gene2224;Name=YE2263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2263
AM286415.1	EMBL	CDS	2472570	2472842	.	-	0	ID=cds2154;Parent=gene2224;Dbxref=EnsemblGenomes-Gn:YE2263,EnsemblGenomes-Tr:CAL12323,InterPro:IPR009749,UniProtKB/TrEMBL:A1JQG6,NCBI_GP:CAL12323.1;Name=CAL12323.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12323.1;transl_table=11
AM286415.1	EMBL	gene	2472916	2473329	.	-	.	ID=gene2225;Name=YE2264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2264
AM286415.1	EMBL	CDS	2472916	2473329	.	-	0	ID=cds2155;Parent=gene2225;Dbxref=EnsemblGenomes-Gn:YE2264,EnsemblGenomes-Tr:CAL12324,GOA:A1JQG8,InterPro:IPR002579,InterPro:IPR011057,InterPro:IPR028427,NCBI_GP:CAL12324.1;Name=CAL12324.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12324.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2472943	2473311	.	-	.	ID=id4093;Note=Pfam match to entry PF01641 SelR%2C SelR domain %2Cscore 261.9%2C E-value 5.6e-76;gbkey=misc_feature;inference=protein motif:PFAM:PF01641
AM286415.1	EMBL	gene	2473668	2474672	.	+	.	ID=gene2226;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=YE2265
AM286415.1	EMBL	CDS	2473668	2474672	.	+	0	ID=cds2156;Parent=gene2226;Dbxref=EnsemblGenomes-Gn:YE2265,EnsemblGenomes-Tr:CAL12325,GOA:A1JQH1,InterPro:IPR006424,InterPro:IPR016040,InterPro:IPR020828,InterPro:IPR020829,InterPro:IPR020830,InterPro:IPR020831,UniProtKB/TrEMBL:A1JQH1,NCBI_GP:CAL12325.1;Name=CAL12325.1;gbkey=CDS;gene=gapA;product=glyceraldehyde 3-phosphate dehydrogenase A;protein_id=CAL12325.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2473680	2474126	.	+	.	ID=id4094;Note=Pfam match to entry PF00044 gpdh%2C Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain%2C score 342.4%2C E-value 3.3e-100;gbkey=misc_feature;gene=gapA;inference=protein motif:PFAM:PF00044
AM286415.1	EMBL	sequence_feature	2474118	2474141	.	+	.	ID=id4095;Note=PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.;gbkey=misc_feature;gene=gapA;inference=protein motif:Prosite:PS00071
AM286415.1	EMBL	sequence_feature	2474127	2474612	.	+	.	ID=id4096;Note=Pfam match to entry PF02800 gpdh_C%2C Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%2C score 422.3%2C E-value 2.8e-124;gbkey=misc_feature;gene=gapA;inference=protein motif:PFAM:PF02800
AM286415.1	EMBL	gene	2474848	2475159	.	-	.	ID=gene2227;Name=YE2266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2266
AM286415.1	EMBL	CDS	2474848	2475159	.	-	0	ID=cds2157;Parent=gene2227;Dbxref=EnsemblGenomes-Gn:YE2266,EnsemblGenomes-Tr:CAL12326,InterPro:IPR020353,UniProtKB/TrEMBL:A1JQH6,NCBI_GP:CAL12326.1;Name=CAL12326.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12326.1;transl_table=11
AM286415.1	EMBL	gene	2475249	2475458	.	-	.	ID=gene2228;Name=YE2267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2267
AM286415.1	EMBL	CDS	2475249	2475458	.	-	0	ID=cds2158;Parent=gene2228;Dbxref=EnsemblGenomes-Gn:YE2267,EnsemblGenomes-Tr:CAL12327,UniProtKB/TrEMBL:A1JQH8,NCBI_GP:CAL12327.1;Name=CAL12327.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12327.1;transl_table=11
AM286415.1	EMBL	gene	2475540	2475749	.	-	.	ID=gene2229;Name=YE2268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2268
AM286415.1	EMBL	CDS	2475540	2475749	.	-	0	ID=cds2159;Parent=gene2229;Dbxref=EnsemblGenomes-Gn:YE2268,EnsemblGenomes-Tr:CAL12328,UniProtKB/TrEMBL:A1JQI1,NCBI_GP:CAL12328.1;Name=CAL12328.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12328.1;transl_table=11
AM286415.1	EMBL	gene	2476274	2477152	.	+	.	ID=gene2230;Name=YE2269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2269
AM286415.1	EMBL	CDS	2476274	2477152	.	+	0	ID=cds2160;Parent=gene2230;Dbxref=EnsemblGenomes-Gn:YE2269,EnsemblGenomes-Tr:CAL12329,GOA:A1JQI5,InterPro:IPR008183,InterPro:IPR011013,InterPro:IPR014718,InterPro:IPR025532,UniProtKB/TrEMBL:A1JQI5,NCBI_GP:CAL12329.1;Name=CAL12329.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12329.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2476352	2477125	.	+	.	ID=id4097;Note=Pfam match to entry PF01263 Aldose_epim%2C Aldose 1-epimerase%2C score 127.4%2C E-value 1.7e-35;gbkey=misc_feature;inference=protein motif:PFAM:PF01263
AM286415.1	EMBL	repeat_region	2477376	2478679	.	+	.	ID=id4098;Note=IS1330;gbkey=repeat_region
AM286415.1	EMBL	gene	2477460	2478653	.	+	.	ID=gene2231;Name=tpn1330;gbkey=Gene;gene=tpn1330;gene_biotype=protein_coding;locus_tag=YE2270
AM286415.1	EMBL	CDS	2477460	2478653	.	+	0	ID=cds2161;Parent=gene2231;Dbxref=EnsemblGenomes-Gn:YE2270,EnsemblGenomes-Tr:CAL12330,GOA:A1JQI7,InterPro:IPR002559,InterPro:IPR012337,UniProtKB/TrEMBL:A1JQI7,NCBI_GP:CAL12330.1;Name=CAL12330.1;Note=Previously sequenced as Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:CAC83041 (EMBL:AJ344215) (397 aa) fasta scores: E(): 1.4e-162%2C99.74 38d in 397 aa. Also similar to Shigella flexneri%2Cand Shigella flexneri 2A IS10 orf S0034 or Cp0027 SWALL:Q9AFX7 (EMBL:AF348706) (407 aa) fasta scores: E(): 1.1e-112%2C 68.26 38d in 397 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330;protein_id=CAL12330.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2477730	2478449	.	+	.	ID=id4099;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 54.3%2C E-value 1.7e-13;gbkey=misc_feature;gene=tpn1330;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	gene	2478725	2479495	.	-	.	ID=gene2232;Name=YE2271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2271
AM286415.1	EMBL	CDS	2478725	2479495	.	-	0	ID=cds2162;Parent=gene2232;Dbxref=EnsemblGenomes-Gn:YE2271,EnsemblGenomes-Tr:CAL12331,InterPro:IPR010583,UniProtKB/TrEMBL:A1JQJ0,NCBI_GP:CAL12331.1;Name=CAL12331.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12331.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2479391	2479459	.	-	.	ID=id4100;Note=1 probable transmembrane helix predicted for YE2271 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2480041	2481975	.	+	.	ID=gene2233;Name=YE2272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2272
AM286415.1	EMBL	CDS	2480041	2481975	.	+	0	ID=cds2163;Parent=gene2233;Dbxref=EnsemblGenomes-Gn:YE2272,EnsemblGenomes-Tr:CAL12332,GOA:A1JQJ4,InterPro:IPR010650,InterPro:IPR013153,InterPro:IPR016230,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQJ4,NCBI_GP:CAL12332.1;Name=CAL12332.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12332.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2480368	2480391	.	+	.	ID=id4101;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2482087	2483364	.	+	.	ID=gene2234;Name=YE2273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2273
AM286415.1	EMBL	CDS	2482087	2483364	.	+	0	ID=cds2164;Parent=gene2234;Dbxref=EnsemblGenomes-Gn:YE2273,EnsemblGenomes-Tr:CAL12333,InterPro:IPR006698,NCBI_GP:CAL12333.1;Name=CAL12333.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12333.1;transl_table=11
AM286415.1	EMBL	gene	2483467	2484516	.	+	.	ID=gene2235;Name=YE2274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2274
AM286415.1	EMBL	CDS	2483467	2484516	.	+	0	ID=cds2165;Parent=gene2235;Dbxref=EnsemblGenomes-Gn:YE2274,EnsemblGenomes-Tr:CAL12334,GOA:A1JQK0,InterPro:IPR000620,UniProtKB/TrEMBL:A1JQK0,NCBI_GP:CAL12334.1;Name=CAL12334.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12334.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2483500	2483553	.	+	.	ID=id4102;Note=10 probable transmembrane helices predicted for YE2274 by TMHMM2.0 at aa 12-29%2C 39-59%2C 72-94%2C 99-121%2C128-147%2C 152-169%2C 182-204%2C 214-236%2C 245-262 and 266-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	2483581	2483643	.	+	.	ID=id4102;Note=10 probable transmembrane helices predicted for YE2274 by TMHMM2.0 at aa 12-29%2C 39-59%2C 72-94%2C 99-121%2C128-147%2C 152-169%2C 182-204%2C 214-236%2C 245-262 and 266-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	2483680	2483748	.	+	.	ID=id4102;Note=10 probable transmembrane helices predicted for YE2274 by TMHMM2.0 at aa 12-29%2C 39-59%2C 72-94%2C 99-121%2C128-147%2C 152-169%2C 182-204%2C 214-236%2C 245-262 and 266-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	2483761	2483829	.	+	.	ID=id4102;Note=10 probable transmembrane helices predicted for YE2274 by TMHMM2.0 at aa 12-29%2C 39-59%2C 72-94%2C 99-121%2C128-147%2C 152-169%2C 182-204%2C 214-236%2C 245-262 and 266-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	2483848	2483907	.	+	.	ID=id4102;Note=10 probable transmembrane helices predicted for YE2274 by TMHMM2.0 at aa 12-29%2C 39-59%2C 72-94%2C 99-121%2C128-147%2C 152-169%2C 182-204%2C 214-236%2C 245-262 and 266-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	2483920	2483973	.	+	.	ID=id4102;Note=10 probable transmembrane helices predicted for YE2274 by TMHMM2.0 at aa 12-29%2C 39-59%2C 72-94%2C 99-121%2C128-147%2C 152-169%2C 182-204%2C 214-236%2C 245-262 and 266-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	2484010	2484078	.	+	.	ID=id4102;Note=10 probable transmembrane helices predicted for YE2274 by TMHMM2.0 at aa 12-29%2C 39-59%2C 72-94%2C 99-121%2C128-147%2C 152-169%2C 182-204%2C 214-236%2C 245-262 and 266-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	2484106	2484174	.	+	.	ID=id4102;Note=10 probable transmembrane helices predicted for YE2274 by TMHMM2.0 at aa 12-29%2C 39-59%2C 72-94%2C 99-121%2C128-147%2C 152-169%2C 182-204%2C 214-236%2C 245-262 and 266-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	2484199	2484252	.	+	.	ID=id4102;Note=10 probable transmembrane helices predicted for YE2274 by TMHMM2.0 at aa 12-29%2C 39-59%2C 72-94%2C 99-121%2C128-147%2C 152-169%2C 182-204%2C 214-236%2C 245-262 and 266-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	2484262	2484321	.	+	.	ID=id4102;Note=10 probable transmembrane helices predicted for YE2274 by TMHMM2.0 at aa 12-29%2C 39-59%2C 72-94%2C 99-121%2C128-147%2C 152-169%2C 182-204%2C 214-236%2C 245-262 and 266-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	2483524	2483901	.	+	.	ID=id4103;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 64.0%2C E-value 2e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	2483926	2483958	.	+	.	ID=id4104;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2483959	2484324	.	+	.	ID=id4105;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 29.6%2C E-value 4.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	2484711	2485157	.	+	.	ID=gene2236;Name=YE2275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2275
AM286415.1	EMBL	CDS	2484711	2485157	.	+	0	ID=cds2166;Parent=gene2236;Dbxref=EnsemblGenomes-Gn:YE2275,EnsemblGenomes-Tr:CAL12335,UniProtKB/TrEMBL:A1JQK7,NCBI_GP:CAL12335.1;Name=CAL12335.1;Note=no significant database hits;gbkey=CDS;product=putative exported protein;protein_id=CAL12335.1;transl_table=11
AM286415.1	EMBL	gene	2485170	2486075	.	-	.	ID=gene2237;Name=YE2276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2276
AM286415.1	EMBL	CDS	2485170	2486075	.	-	0	ID=cds2167;Parent=gene2237;Dbxref=EnsemblGenomes-Gn:YE2276,EnsemblGenomes-Tr:CAL12336,GOA:A1JQK8,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JQK8,NCBI_GP:CAL12336.1;Name=CAL12336.1;gbkey=CDS;product=LysR-family transcriptional regulatory protein;protein_id=CAL12336.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2485188	2485817	.	-	.	ID=id4106;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 121.9%2C E-value 7.7e-34;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	2485257	2485286	.	-	.	ID=id4107;Note=PS00142 Neutral zinc metallopeptidases%2Czinc-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00142
AM286415.1	EMBL	sequence_feature	2485887	2486066	.	-	.	ID=id4108;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 65.5%2C E-value 7.2e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2485962	2486027	.	-	.	ID=id4109;Note=Predicted helix-turn-helix motif with score 1228.000%2C SD 3.37 at aa 17-38%2C sequence GGFSAAARVLGLPKSKLSRRLA;gbkey=misc_feature
AM286415.1	EMBL	gene	2486244	2487116	.	+	.	ID=gene2238;Name=YE2277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2277
AM286415.1	EMBL	CDS	2486244	2487116	.	+	0	ID=cds2168;Parent=gene2238;Dbxref=EnsemblGenomes-Gn:YE2277,EnsemblGenomes-Tr:CAL12337,InterPro:IPR003829,InterPro:IPR008778,InterPro:IPR011051,InterPro:IPR012093,InterPro:IPR014710,UniProtKB/TrEMBL:A1JQL4,NCBI_GP:CAL12337.1;Name=CAL12337.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12337.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2486259	2487011	.	+	.	ID=id4110;Note=Pfam match to entry PF02678 DUF209%2C Uncharacterized BCR%2C YhhW family COG1741%2C score -31.6%2C E-value 4.1e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF02678
AM286415.1	EMBL	gene	2487463	2490057	.	+	.	ID=gene2239;Name=YE2278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2278
AM286415.1	EMBL	CDS	2487463	2490057	.	+	0	ID=cds2169;Parent=gene2239;Dbxref=EnsemblGenomes-Gn:YE2278,EnsemblGenomes-Tr:CAL12338,GOA:A1JQL7,InterPro:IPR000014,InterPro:IPR000160,InterPro:IPR000700,InterPro:IPR001610,InterPro:IPR001633,InterPro:IPR003018,InterPro:IPR012226,InterPro:IPR029016,InterPro:IPR029787,UniProtKB/TrEMBL:A1JQL7,NCBI_GP:CAL12338.1;Name=CAL12338.1;Note=Weakly similar to many including: Rhizobium meliloti hypothetical protein R00959 or Smc00038 SWALL:Q92KJ3 (EMBL:AL591785) (772 aa) fasta scores: E(): 4.1e-83%2C 35 38d in 737 aa and to Acetobacter xylinus C-di-GMP phosphodiesterase a PdeA3 SWALL:O87378 (EMBL:AF052519) (740 aa) fasta scores: E(): 1.2e-81%2C 35.4 id in 723 aa. Contains many motifs which are commonly found in phosphodiesterases.;gbkey=CDS;inference=similar to sequence:INSDC:AL591785;product=putative phosphodiesterase;protein_id=CAL12338.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2487556	2487717	.	+	.	ID=id4111;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 14.8%2C E-value 0.0012;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	2487739	2487867	.	+	.	ID=id4112;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 30.3%2C E-value 3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	2487979	2488104	.	+	.	ID=id4113;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 22.6%2C E-value 8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	2488138	2488254	.	+	.	ID=id4114;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 8.0%2C E-value 0.43;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	2488258	2488734	.	+	.	ID=id4115;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 36.0%2C E-value 5.8e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF01590
AM286415.1	EMBL	sequence_feature	2488759	2489241	.	+	.	ID=id4116;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 215.5%2C E-value 5.3e-62;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	2489281	2490021	.	+	.	ID=id4117;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score 376.2%2C E-value 2.2e-110;gbkey=misc_feature;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	gene	2490228	2491418	.	+	.	ID=gene2240;Name=YE2279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2279
AM286415.1	EMBL	CDS	2490228	2491418	.	+	0	ID=cds2170;Parent=gene2240;Dbxref=EnsemblGenomes-Gn:YE2279,EnsemblGenomes-Tr:CAL12339,GOA:A1JQM2,InterPro:IPR001958,InterPro:IPR004812,InterPro:IPR005829,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JQM2,NCBI_GP:CAL12339.1;Name=CAL12339.1;gbkey=CDS;product=putative multidrug resistance protein;protein_id=CAL12339.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2490234	2491403	.	+	.	ID=id4118;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -74.2%2C E-value 3.2e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	2490246	2490314	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2490342	2490410	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2490444	2490512	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2490522	2490575	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2490612	2490680	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2490693	2490761	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2490840	2490908	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2490951	2491019	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2491038	2491097	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2491140	2491208	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2491242	2491310	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2491320	2491373	.	+	.	ID=id4119;Note=12 probable transmembrane helices predicted for YE2279 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 99-116%2C129-151%2C 156-178%2C 205-227%2C 242-264%2C 271-290%2C 305-327%2C339-361 and 365-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2490399	2490449	.	+	.	ID=id4120;Note=PS00216 Sugar transport proteins signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00216
AM286415.1	EMBL	sequence_feature	2491047	2491079	.	+	.	ID=id4121;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2491131	2491163	.	+	.	ID=id4122;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2491320	2491352	.	+	.	ID=id4123;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2491633	2492700	.	-	.	ID=gene2241;Name=dadB;gbkey=Gene;gene=dadB;gene_biotype=protein_coding;locus_tag=YE2280
AM286415.1	EMBL	CDS	2491633	2492700	.	-	0	ID=cds2171;Parent=gene2241;Dbxref=EnsemblGenomes-Gn:YE2280,EnsemblGenomes-Tr:CAL12340,GOA:A1JQN5,InterPro:IPR000821,InterPro:IPR001608,InterPro:IPR009006,InterPro:IPR011079,InterPro:IPR020622,InterPro:IPR029066,UniProtKB/TrEMBL:A1JQN5,NCBI_GP:CAL12340.1;Name=CAL12340.1;Note=Highly similar to Escherichia coli alanine racemase%2C catabolic DadX or DadB or AlnB or b1190 SWALL:ALR2_ECOLI (SWALL:P29012) (356 aa) fasta scores: E(): 3.6e-89%2C 63.38 38d in 355 aa and to Salmonella typhimurium alanine racemase%2C catabolic DadX or DadB or Stm1802 SWALL:ALR2_SALTY (SWALL:P06191) (356 aa) fasta scores: E(): 1.3e-87%2C 62.25 38d in 355 aa;gbkey=CDS;gene=dadB;inference=similar to sequence:UniProtKB:P29012;product=alanine racemase%2C catabolic;protein_id=CAL12340.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2491642	2492616	.	-	.	ID=id4124;Note=Pfam match to entry PF00842 Ala_racemase%2C Alanine racemase%2C score 486.3%2C E-value 1.6e-143;gbkey=misc_feature;gene=dadB;inference=protein motif:PFAM:PF00842
AM286415.1	EMBL	sequence_feature	2492575	2492607	.	-	.	ID=id4125;Note=PS00395 Alanine racemase pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=dadB;inference=protein motif:Prosite:PS00395
AM286415.1	EMBL	gene	2492900	2494204	.	-	.	ID=gene2242;Name=dadA;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;gene_synonym=dadR;locus_tag=YE2281
AM286415.1	EMBL	CDS	2492900	2494204	.	-	0	ID=cds2172;Parent=gene2242;Dbxref=EnsemblGenomes-Gn:YE2281,EnsemblGenomes-Tr:CAL12341,GOA:A1JQN9,InterPro:IPR006076,InterPro:IPR023080,NCBI_GP:CAL12341.1;Name=CAL12341.1;gbkey=CDS;gene=dadA;product=D-amino acid dehydrogenase small subunit;protein_id=CAL12341.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2493008	2494204	.	-	.	ID=id4126;Note=Pfam match to entry PF01266 DAO%2C FAD dependent oxidoreductase%2C score -57.5%2C E-value 6.8e-05;gbkey=misc_feature;gene=dadA;inference=protein motif:PFAM:PF01266
AM286415.1	EMBL	gene	2494715	2496250	.	+	.	ID=gene2243;Name=YE2282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2282
AM286415.1	EMBL	CDS	2494715	2496250	.	+	0	ID=cds2173;Parent=gene2243;Dbxref=EnsemblGenomes-Gn:YE2282,EnsemblGenomes-Tr:CAL12342,InterPro:IPR007390,UniProtKB/TrEMBL:A1JQP3,NCBI_GP:CAL12342.1;Name=CAL12342.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12342.1;transl_table=11
AM286415.1	EMBL	gene	2496336	2497055	.	-	.	ID=gene2244;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;gene_synonym=oleR,thdB;locus_tag=YE2283
AM286415.1	EMBL	CDS	2496336	2497055	.	-	0	ID=cds2174;Parent=gene2244;Dbxref=EnsemblGenomes-Gn:YE2283,EnsemblGenomes-Tr:CAL12343,GOA:A1JQP6,InterPro:IPR000524,InterPro:IPR008920,InterPro:IPR011991,InterPro:IPR014178,InterPro:IPR028374,NCBI_GP:CAL12343.1;Name=CAL12343.1;gbkey=CDS;gene=fadR;product=fatty acid metabolism regulatory protein;protein_id=CAL12343.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2496843	2497022	.	-	.	ID=id4127;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 99.9%2C E-value 3.2e-27;gbkey=misc_feature;gene=fadR;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	sequence_feature	2496891	2496965	.	-	.	ID=id4128;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=misc_feature;gene=fadR;inference=protein motif:Prosite:PS00043
AM286415.1	EMBL	gene	2497366	2498940	.	+	.	ID=gene2245;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=YE2284
AM286415.1	EMBL	CDS	2497366	2498940	.	+	0	ID=cds2175;Parent=gene2245;Dbxref=EnsemblGenomes-Gn:YE2284,EnsemblGenomes-Tr:CAL12344,GOA:A1JQP8,InterPro:IPR004671,NCBI_GP:CAL12344.1;Name=CAL12344.1;gbkey=CDS;gene=nhaB;product=Na+/H+ antiporter;protein_id=CAL12344.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2497423	2497482	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	2497492	2497560	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	2497651	2497719	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	2497795	2497863	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	2497960	2498028	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	2498080	2498148	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	2498263	2498322	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	2498332	2498400	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	2498419	2498487	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	2498725	2498784	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	2498803	2498871	.	+	.	ID=id4129;Note=11 probable transmembrane helices predicted for YE2284 by TMHMM2.0 at aa 20-39%2C 43-65%2C 96-118%2C 144-166%2C199-221%2C 239-261%2C 300-319%2C 323-345%2C 352-374%2C 454-473 and 480-502;gbkey=misc_feature;gene=nhaB;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	2499170	2499700	.	+	.	ID=gene2246;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;gene_synonym=roxB;locus_tag=YE2285
AM286415.1	EMBL	CDS	2499170	2499700	.	+	0	ID=cds2176;Parent=gene2246;Dbxref=EnsemblGenomes-Gn:YE2285,EnsemblGenomes-Tr:CAL12345,GOA:A1JQQ3,InterPro:IPR003752,InterPro:IPR022920,InterPro:IPR023380,NCBI_GP:CAL12345.1;Name=CAL12345.1;gbkey=CDS;gene=dsbB;product=disulfide bond formation protein B;protein_id=CAL12345.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2499179	2499661	.	+	.	ID=id4130;Note=Pfam match to entry PF02600 DsbB%2C Disulfide bond formation protein DsbB%2C score 232.9%2C E-value 3e-67;gbkey=misc_feature;gene=dsbB;inference=protein motif:PFAM:PF02600
AM286415.1	EMBL	sequence_feature	2499206	2499274	.	+	.	ID=id4131;Note=4 probable transmembrane helices predicted for YE2285 by TMHMM2.0 at aa 13-35%2C 45-64%2C 71-93 and 144-166;gbkey=misc_feature;gene=dsbB;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2499302	2499361	.	+	.	ID=id4131;Note=4 probable transmembrane helices predicted for YE2285 by TMHMM2.0 at aa 13-35%2C 45-64%2C 71-93 and 144-166;gbkey=misc_feature;gene=dsbB;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2499380	2499448	.	+	.	ID=id4131;Note=4 probable transmembrane helices predicted for YE2285 by TMHMM2.0 at aa 13-35%2C 45-64%2C 71-93 and 144-166;gbkey=misc_feature;gene=dsbB;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2499599	2499667	.	+	.	ID=id4131;Note=4 probable transmembrane helices predicted for YE2285 by TMHMM2.0 at aa 13-35%2C 45-64%2C 71-93 and 144-166;gbkey=misc_feature;gene=dsbB;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2499837	2500625	.	-	.	ID=gene2247;Name=lpxA2;gbkey=Gene;gene=lpxA2;gene_biotype=protein_coding;locus_tag=YE2286
AM286415.1	EMBL	CDS	2499837	2500625	.	-	0	ID=cds2177;Parent=gene2247;Dbxref=EnsemblGenomes-Gn:YE2286,EnsemblGenomes-Tr:CAL12346,GOA:A1JQQ7,InterPro:IPR001451,InterPro:IPR010137,InterPro:IPR011004,InterPro:IPR018357,InterPro:IPR029098,UniProtKB/TrEMBL:A1JQQ7,NCBI_GP:CAL12346.1;Name=CAL12346.1;Note=Highly similar to Yersinia enterocolitica acyl-[acyl-carrier-protein]--udp-N-acetylglucosamine O-acyltransferase LpxA or YE3272 SWALL:LPXA_YEREN (SWALL:P32201) (262 aa) fasta scores: E(): 1.2e-58%2C 55.34 id in 262 aa%2C and to Escherichia coli acyl-[acyl-carrier-protein]--udp-N-acetylglucosamine O-acyltransferase LpxA or b0181 SWALL:LPXA_ECOLI (SWALL:P10440) (262 aa) fasta scores: E(): 2e-56%2C 55.72 id in 262 aa;gbkey=CDS;gene=lpxA2;inference=similar to sequence:UniProtKB:P32201;product=acyl-[acyl-carrier-protein]--udp-N-acetylglucos amine O-acyltransferase;protein_id=CAL12346.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2500125	2500178	.	-	.	ID=id4132;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 11.0%2CE-value 1.8;gbkey=misc_feature;gene=lpxA2;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	2500197	2500250	.	-	.	ID=id4133;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 13.1%2CE-value 0.43;gbkey=misc_feature;gene=lpxA2;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	2500251	2500304	.	-	.	ID=id4134;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 13.1%2CE-value 0.44;gbkey=misc_feature;gene=lpxA2;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	2500326	2500379	.	-	.	ID=id4135;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 14.6%2CE-value 0.15;gbkey=misc_feature;gene=lpxA2;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	2500416	2500469	.	-	.	ID=id4136;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 4.2%2CE-value 14;gbkey=misc_feature;gene=lpxA2;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	2500470	2500523	.	-	.	ID=id4137;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 13.5%2CE-value 0.34;gbkey=misc_feature;gene=lpxA2;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	2500482	2500568	.	-	.	ID=id4138;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;gbkey=misc_feature;gene=lpxA2;inference=protein motif:Prosite:PS00101
AM286415.1	EMBL	sequence_feature	2500524	2500577	.	-	.	ID=id4139;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 22.9%2CE-value 0.0005;gbkey=misc_feature;gene=lpxA2;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	gene	2501179	2501535	.	-	.	ID=gene2248;Name=YE2288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2288
AM286415.1	EMBL	CDS	2501179	2501535	.	-	0	ID=cds2178;Parent=gene2248;Dbxref=EnsemblGenomes-Gn:YE2288,EnsemblGenomes-Tr:CAL12347,UniProtKB/TrEMBL:A1JQR5,NCBI_GP:CAL12347.1;Name=CAL12347.1;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12347.1;transl_table=11
AM286415.1	EMBL	repeat_region	2501600	2501631	.	+	.	ID=id4140;Note=Direct repeat flanking prophage region%2C 32mer;gbkey=repeat_region
AM286415.1	EMBL	sequence_feature	2501632	2554688	.	+	.	ID=id4141;Note=YE250%3B degenerate lambdoid prophage;gbkey=misc_feature;standard_name=YE250
AM286415.1	EMBL	gene	2502036	2502494	.	+	.	ID=gene2249;Name=YE2289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2289
AM286415.1	EMBL	CDS	2502036	2502494	.	+	0	ID=cds2179;Parent=gene2249;Dbxref=EnsemblGenomes-Gn:YE2289,EnsemblGenomes-Tr:CAL12348,UniProtKB/TrEMBL:A1JQR9,NCBI_GP:CAL12348.1;Name=CAL12348.1;gbkey=CDS;product=putative phage membrane protein;protein_id=CAL12348.1;transl_table=11
AM286415.1	EMBL	gene	2502488	2502814	.	+	.	ID=gene2250;Name=YE2290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2290
AM286415.1	EMBL	CDS	2502488	2502814	.	+	0	ID=cds2180;Parent=gene2250;Dbxref=EnsemblGenomes-Gn:YE2290,EnsemblGenomes-Tr:CAL12349,InterPro:IPR010862,UniProtKB/TrEMBL:A1JQS0,NCBI_GP:CAL12349.1;Name=CAL12349.1;gbkey=CDS;product=putative phage-associated acyl carrier protein;protein_id=CAL12349.1;transl_table=11
AM286415.1	EMBL	gene	2503099	2503740	.	+	.	ID=gene2251;Name=YE2291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2291
AM286415.1	EMBL	CDS	2503099	2503740	.	+	0	ID=cds2181;Parent=gene2251;Dbxref=EnsemblGenomes-Gn:YE2291,EnsemblGenomes-Tr:CAL12350,UniProtKB/TrEMBL:A1JQS3,NCBI_GP:CAL12350.1;Name=CAL12350.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12350.1;transl_table=11
AM286415.1	EMBL	gene	2504021	2504479	.	-	.	ID=gene2252;Name=YE2292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2292
AM286415.1	EMBL	CDS	2504021	2504479	.	-	0	ID=cds2182;Parent=gene2252;Dbxref=EnsemblGenomes-Gn:YE2292,EnsemblGenomes-Tr:CAL12351,InterPro:IPR003458,UniProtKB/TrEMBL:A1JQS5,NCBI_GP:CAL12351.1;Name=CAL12351.1;gbkey=CDS;product=putative phage tail fiber assembly protein;protein_id=CAL12351.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2504042	2504128	.	-	.	ID=id4142;Note=Pfam match to entry PF02413 DUF144%2C Domain of unknown function DUF144%2C score 26.5%2C E-value 6.1e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF02413
AM286415.1	EMBL	sequence_feature	2504192	2504239	.	-	.	ID=id4143;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00038
AM286415.1	EMBL	sequence_feature	2504288	2504311	.	-	.	ID=id4144;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00687
AM286415.1	EMBL	gene	2504488	2506299	.	-	.	ID=gene2253;Name=YE2293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2293
AM286415.1	EMBL	CDS	2504488	2506299	.	-	0	ID=cds2183;Parent=gene2253;Dbxref=EnsemblGenomes-Gn:YE2293,EnsemblGenomes-Tr:CAL12352,UniProtKB/TrEMBL:A1JQS8,NCBI_GP:CAL12352.1;Name=CAL12352.1;Note=Similar to Salmonella typhi putative phage tail protein Hcm2.0051C SWALL:Q935B1 (EMBL:AL513384) (850 aa) fasta scores: E(): 3.1e-12%2C 26.89 38d in 409 aa%2C Yersinia pestis hypothetical phage protein Ypo2133 SWALL:Q8ZEM8 (EMBL:AJ414151) (305 aa) fasta scores: E(): 1.1e-23%2C37.41 38d in 302 aa and Salmonella typhimurium LT2 gifsy-2 prophage probable tail fiber protein Stm1049 SWALL:Q8ZQ81 (EMBL:AE008743) (812 aa) fasta scores: E(): 0.00023%2C25.79 38d in 442 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL513384;product=putative phage tail protein;protein_id=CAL12352.1;transl_table=11
AM286415.1	EMBL	gene	2506325	2507029	.	-	.	ID=gene2254;Name=YE2294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2294
AM286415.1	EMBL	CDS	2506325	2507029	.	-	0	ID=cds2184;Parent=gene2254;Dbxref=EnsemblGenomes-Gn:YE2294,EnsemblGenomes-Tr:CAL12353,UniProtKB/TrEMBL:A1JQT1,NCBI_GP:CAL12353.1;Name=CAL12353.1;Note=Weakly similar to Bacteriophage 933W%2C Bacteriophage VT2-Sa%2C and Stx2 converting bacteriophage I hypothetical 23.1 kDa protein l0127 SWALL:Q9XJL4 (EMBL:AF125520) (205 aa) fasta scores: E(): 0.033%2C 29.37 38d in 160 aa and to Bacteriophage N15 Gp23 SWALL:O64337 (EMBL:AF064539) (225 aa) fasta scores: E(): 8.1%2C 25.83 38d in 240 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF125520;product=hypothetical phage-related protein;protein_id=CAL12353.1;transl_table=11
AM286415.1	EMBL	gene	2507029	2507295	.	-	.	ID=gene2255;Name=YE2295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2295
AM286415.1	EMBL	CDS	2507029	2507295	.	-	0	ID=cds2185;Parent=gene2255;Dbxref=EnsemblGenomes-Gn:YE2295,EnsemblGenomes-Tr:CAL12354,UniProtKB/TrEMBL:A1JQT5,NCBI_GP:CAL12354.1;Name=CAL12354.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12354.1;transl_table=11
AM286415.1	EMBL	gene	2507298	2510480	.	-	.	ID=gene2256;Name=YE2296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2296
AM286415.1	EMBL	CDS	2507298	2510480	.	-	0	ID=cds2186;Parent=gene2256;Dbxref=EnsemblGenomes-Gn:YE2296,EnsemblGenomes-Tr:CAL12355,InterPro:IPR003961,InterPro:IPR013783,InterPro:IPR015406,UniProtKB/TrEMBL:A1JQT8,NCBI_GP:CAL12355.1;Name=CAL12355.1;gbkey=CDS;product=putative phage host specificity protein;protein_id=CAL12355.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2508381	2508617	.	-	.	ID=id4145;Note=Pfam match to entry PF00041 fn3%2C Fibronectin type III domain%2C score 8.4%2C E-value 0.026;gbkey=misc_feature;inference=protein motif:PFAM:PF00041
AM286415.1	EMBL	gene	2510655	2510954	.	+	.	ID=gene2257;Name=YE2297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2297
AM286415.1	EMBL	CDS	2510655	2510954	.	+	0	ID=cds2187;Parent=gene2257;Dbxref=EnsemblGenomes-Gn:YE2297,EnsemblGenomes-Tr:CAL12356,UniProtKB/TrEMBL:A1JQU2,NCBI_GP:CAL12356.1;Name=CAL12356.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12356.1;transl_table=11
AM286415.1	EMBL	gene	2510984	2511202	.	-	.	ID=gene2258;Name=YE2298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2298
AM286415.1	EMBL	CDS	2510984	2511202	.	-	0	ID=cds2188;Parent=gene2258;Dbxref=EnsemblGenomes-Gn:YE2298,EnsemblGenomes-Tr:CAL12357,InterPro:IPR009759,UniProtKB/TrEMBL:A1JQU5,NCBI_GP:CAL12357.1;Name=CAL12357.1;Note=Similar to the N-terminus of many hypothetical E. coli proteins including: Escherichia coli hypothetical protein YdfR or b1555 SWALL:YDFR_ECOLI (SWALL:P76160) (103 aa) fasta scores: E(): 1.8e-05%2C 38.88 38d in 72 aa and to Escherichia coli O157:H7 hypothetical protein Ecs1531 or ecs3496 SWALL:Q8X4K2 (EMBL:AP002555) (114 aa) fasta scores: E(): 0.00034%2C 37.5 38d in 72 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76160;product=hypothetical phage protein;protein_id=CAL12357.1;transl_table=11
AM286415.1	EMBL	gene	2511244	2511846	.	-	.	ID=gene2259;Name=YE2299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2299
AM286415.1	EMBL	CDS	2511244	2511846	.	-	0	ID=cds2189;Parent=gene2259;Dbxref=EnsemblGenomes-Gn:YE2299,EnsemblGenomes-Tr:CAL12358,InterPro:IPR010654,UniProtKB/TrEMBL:A1JQU8,NCBI_GP:CAL12358.1;Name=CAL12358.1;gbkey=CDS;product=putative phage tail assembly protein;protein_id=CAL12358.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2511472	2511540	.	-	.	ID=id4146;Note=1 probable transmembrane helix predicted for YE2299 by TMHMM2.0 at aa 103-125;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2511908	2512330	.	-	.	ID=gene2260;Name=YE2300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2300
AM286415.1	EMBL	CDS	2511908	2512330	.	-	0	ID=cds2190;Parent=gene2260;Dbxref=EnsemblGenomes-Gn:YE2300,EnsemblGenomes-Tr:CAL12359,UniProtKB/TrEMBL:A1JQV0,NCBI_GP:CAL12359.1;Name=CAL12359.1;Note=Similar to several including: Yersinia pestis hypothetical protein Y1020 or Ypmt1.32 SWALL:O68750 (EMBL:AF074611) (140 aa) fasta scores: E(): 4e-22%2C 49.63 id in 135 aa and to Salmonella typhi putative lipoprotein Hcm2.0080 SWALL:Q934Y7 (EMBL:AL513384) (140 aa) fasta scores: E(): 4.7e-22%2C 49.63 38d in 135 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL513384;product=hypothetical phage protein;protein_id=CAL12359.1;transl_table=11
AM286415.1	EMBL	gene	2512327	2512725	.	-	.	ID=gene2261;Name=YE2301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2301
AM286415.1	EMBL	CDS	2512327	2512725	.	-	0	ID=cds2191;Parent=gene2261;Dbxref=EnsemblGenomes-Gn:YE2301,EnsemblGenomes-Tr:CAL12360,UniProtKB/TrEMBL:A1JQV3,NCBI_GP:CAL12360.1;Name=CAL12360.1;Note=no significant database hits;gbkey=CDS;product=phage-related membrane protein;protein_id=CAL12360.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2512642	2512698	.	-	.	ID=id4147;Note=3 probable transmembrane helices predicted for YE2301 by TMHMM2.0 at aa 10-28%2C 35-57 and 62-81;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2512555	2512623	.	-	.	ID=id4147;Note=3 probable transmembrane helices predicted for YE2301 by TMHMM2.0 at aa 10-28%2C 35-57 and 62-81;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2512483	2512542	.	-	.	ID=id4147;Note=3 probable transmembrane helices predicted for YE2301 by TMHMM2.0 at aa 10-28%2C 35-57 and 62-81;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	2512818	2513546	.	-	.	ID=gene2262;Name=YE2302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2302
AM286415.1	EMBL	CDS	2512818	2513546	.	-	0	ID=cds2192;Parent=gene2262;Dbxref=EnsemblGenomes-Gn:YE2302,EnsemblGenomes-Tr:CAL12361,UniProtKB/TrEMBL:A1JQV8,NCBI_GP:CAL12361.1;Name=CAL12361.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12361.1;transl_table=11
AM286415.1	EMBL	gene	2513558	2513896	.	-	.	ID=gene2263;Name=YE2303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2303
AM286415.1	EMBL	CDS	2513558	2513896	.	-	0	ID=cds2193;Parent=gene2263;Dbxref=EnsemblGenomes-Gn:YE2303,EnsemblGenomes-Tr:CAL12362,UniProtKB/TrEMBL:A1JQW1,NCBI_GP:CAL12362.1;Name=CAL12362.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12362.1;transl_table=11
AM286415.1	EMBL	gene	2514312	2514725	.	+	.	ID=gene2264;Name=YE2305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2305
AM286415.1	EMBL	CDS	2514312	2514725	.	+	0	ID=cds2194;Parent=gene2264;Dbxref=EnsemblGenomes-Gn:YE2305,EnsemblGenomes-Tr:CAL12363,UniProtKB/TrEMBL:A1JQW3,NCBI_GP:CAL12363.1;Name=CAL12363.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12363.1;transl_table=11
AM286415.1	EMBL	gene	2514836	2515153	.	-	.	ID=gene2265;Name=YE2306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2306
AM286415.1	EMBL	CDS	2514836	2515153	.	-	0	ID=cds2195;Parent=gene2265;Dbxref=EnsemblGenomes-Gn:YE2306,EnsemblGenomes-Tr:CAL12364,UniProtKB/TrEMBL:A1JQW5,NCBI_GP:CAL12364.1;Name=CAL12364.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12364.1;transl_table=11
AM286415.1	EMBL	gene	2515365	2515712	.	-	.	ID=gene2266;Name=YE2308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2308
AM286415.1	EMBL	CDS	2515365	2515712	.	-	0	ID=cds2196;Parent=gene2266;Dbxref=EnsemblGenomes-Gn:YE2308,EnsemblGenomes-Tr:CAL12365,GOA:A1JQW8,InterPro:IPR003538,InterPro:IPR006260,UniProtKB/TrEMBL:A1JQW8,NCBI_GP:CAL12365.1;Name=CAL12365.1;Note=Similar to Escherichia coli TonB protein or exba or b1252 SWALL:TONB_ECOLI (SWALL:P02929) (239 aa) fasta scores: E(): 1.7e-09%2C 35.35 38d in 99 aa and to Yersinia enterocolitica TonB protein SWALL:TONB_YEREN (SWALL:Q05740) (255 aa) fasta scores: E(): 2.2e-06%2C 40 38d in 70 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q05740;product=TonB-related phage protein;protein_id=CAL12365.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2515488	2515592	.	-	.	ID=id4148;Note=Pfam match to entry PF03544 TonB%2C Gram-negative bacterial tonB protein%2C score 37.2%2C E-value 2.4e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF03544
AM286415.1	EMBL	gene	2515867	2516571	.	-	.	ID=gene2267;Name=YE2310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2310
AM286415.1	EMBL	CDS	2515867	2516571	.	-	0	ID=cds2197;Parent=gene2267;Dbxref=EnsemblGenomes-Gn:YE2310,EnsemblGenomes-Tr:CAL12366,InterPro:IPR000064,InterPro:IPR000555,InterPro:IPR028090,UniProtKB/TrEMBL:A1JQX0,NCBI_GP:CAL12366.1;Name=CAL12366.1;gbkey=CDS;product=putative phage minor tail protein;protein_id=CAL12366.1;transl_table=11
AM286415.1	EMBL	gene	2516574	2517326	.	-	.	ID=gene2268;Name=YE2311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2311
AM286415.1	EMBL	CDS	2516574	2517326	.	-	0	ID=cds2198;Parent=gene2268;Dbxref=EnsemblGenomes-Gn:YE2311,EnsemblGenomes-Tr:CAL12367,InterPro:IPR006487,UniProtKB/TrEMBL:A1JQX3,NCBI_GP:CAL12367.1;Name=CAL12367.1;gbkey=CDS;product=putative phage protein;protein_id=CAL12367.1;transl_table=11
AM286415.1	EMBL	gene	2517343	2517684	.	-	.	ID=gene2269;Name=YE2312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2312
AM286415.1	EMBL	CDS	2517343	2517684	.	-	0	ID=cds2199;Parent=gene2269;Dbxref=EnsemblGenomes-Gn:YE2312,EnsemblGenomes-Tr:CAL12368,InterPro:IPR010265,UniProtKB/TrEMBL:A1JQX6,NCBI_GP:CAL12368.1;Name=CAL12368.1;gbkey=CDS;product=putative phage protein;protein_id=CAL12368.1;transl_table=11
AM286415.1	EMBL	gene	2517687	2520482	.	-	.	ID=gene2270;Name=YE2313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2313
AM286415.1	EMBL	CDS	2517687	2520482	.	-	0	ID=cds2200;Parent=gene2270;Dbxref=EnsemblGenomes-Gn:YE2313,EnsemblGenomes-Tr:CAL12369,InterPro:IPR006431,InterPro:IPR009628,UniProtKB/TrEMBL:A1JQX8,NCBI_GP:CAL12369.1;Name=CAL12369.1;gbkey=CDS;product=putative phage tail protein;protein_id=CAL12369.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2518056	2518103	.	-	.	ID=id4149;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	gene	2520735	2520914	.	-	.	ID=gene2271;Name=YE2314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2314
AM286415.1	EMBL	CDS	2520735	2520914	.	-	0	ID=cds2201;Parent=gene2271;Dbxref=EnsemblGenomes-Gn:YE2314,EnsemblGenomes-Tr:CAL12370,InterPro:IPR014915,UniProtKB/TrEMBL:A1JQY0,NCBI_GP:CAL12370.1;Name=CAL12370.1;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12370.1;transl_table=11
AM286415.1	EMBL	gene	2521043	2521354	.	-	.	ID=gene2272;Name=YE2315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2315
AM286415.1	EMBL	CDS	2521043	2521354	.	-	0	ID=cds2202;Parent=gene2272;Dbxref=EnsemblGenomes-Gn:YE2315,EnsemblGenomes-Tr:CAL12371,InterPro:IPR014859,UniProtKB/TrEMBL:A1JQY3,NCBI_GP:CAL12371.1;Name=CAL12371.1;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12371.1;transl_table=11
AM286415.1	EMBL	gene	2521367	2522287	.	-	.	ID=gene2273;Name=YE2316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2316
AM286415.1	EMBL	CDS	2521367	2522287	.	-	0	ID=cds2203;Parent=gene2273;Dbxref=EnsemblGenomes-Gn:YE2316,EnsemblGenomes-Tr:CAL12372,InterPro:IPR003343,InterPro:IPR008964,InterPro:IPR014918,UniProtKB/TrEMBL:A1JQY5,NCBI_GP:CAL12372.1;Name=CAL12372.1;gbkey=CDS;product=putative phage protein;protein_id=CAL12372.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2521382	2521621	.	-	.	ID=id4150;Note=Pfam match to entry PF02368 Big_2%2C Bacterial Ig-like domain (group 2)%2C score 74.0%2C E-value 2e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF02368
AM286415.1	EMBL	gene	2522354	2522761	.	-	.	ID=gene2274;Name=YE2317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2317
AM286415.1	EMBL	CDS	2522354	2522761	.	-	0	ID=cds2204;Parent=gene2274;Dbxref=EnsemblGenomes-Gn:YE2317,EnsemblGenomes-Tr:CAL12373,InterPro:IPR025395,UniProtKB/TrEMBL:A1JQY7,NCBI_GP:CAL12373.1;Name=CAL12373.1;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12373.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2522528	2522551	.	-	.	ID=id4151;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2522758	2523342	.	-	.	ID=gene2275;Name=YE2318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2318
AM286415.1	EMBL	CDS	2522758	2523342	.	-	0	ID=cds2205;Parent=gene2275;Dbxref=EnsemblGenomes-Gn:YE2318,EnsemblGenomes-Tr:CAL12374,UniProtKB/TrEMBL:A1JQZ1,NCBI_GP:CAL12374.1;Name=CAL12374.1;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12374.1;transl_table=11
AM286415.1	EMBL	gene	2523344	2523694	.	-	.	ID=gene2276;Name=YE2319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2319
AM286415.1	EMBL	CDS	2523344	2523694	.	-	0	ID=cds2206;Parent=gene2276;Dbxref=EnsemblGenomes-Gn:YE2319,EnsemblGenomes-Tr:CAL12375,UniProtKB/TrEMBL:A1JQZ3,NCBI_GP:CAL12375.1;Name=CAL12375.1;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12375.1;transl_table=11
AM286415.1	EMBL	gene	2523694	2524221	.	-	.	ID=gene2277;Name=YE2320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2320
AM286415.1	EMBL	CDS	2523694	2524221	.	-	0	ID=cds2207;Parent=gene2277;Dbxref=EnsemblGenomes-Gn:YE2320,EnsemblGenomes-Tr:CAL12376,UniProtKB/TrEMBL:A1JQZ6,NCBI_GP:CAL12376.1;Name=CAL12376.1;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12376.1;transl_table=11
AM286415.1	EMBL	gene	2524224	2525429	.	-	.	ID=gene2278;Name=YE2321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2321
AM286415.1	EMBL	CDS	2524224	2525429	.	-	0	ID=cds2208;Parent=gene2278;Dbxref=EnsemblGenomes-Gn:YE2321,EnsemblGenomes-Tr:CAL12377,InterPro:IPR003343,InterPro:IPR008964,UniProtKB/TrEMBL:A1JQZ7,NCBI_GP:CAL12377.1;Name=CAL12377.1;gbkey=CDS;product=putative phage protein;protein_id=CAL12377.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2524242	2524478	.	-	.	ID=id4152;Note=Pfam match to entry PF02368 Big_2%2C Bacterial Ig-like domain (group 2)%2C score 84.7%2C E-value 1.2e-22;gbkey=misc_feature;inference=protein motif:PFAM:PF02368
AM286415.1	EMBL	gene	2525443	2526216	.	-	.	ID=gene2279;Name=YE2322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2322
AM286415.1	EMBL	CDS	2525443	2526216	.	-	0	ID=cds2209;Parent=gene2279;Dbxref=EnsemblGenomes-Gn:YE2322,EnsemblGenomes-Tr:CAL12378,UniProtKB/TrEMBL:A1JR01,NCBI_GP:CAL12378.1;Name=CAL12378.1;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12378.1;transl_table=11
AM286415.1	EMBL	gene	2526338	2527450	.	-	.	ID=gene2280;Name=YE2323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2323
AM286415.1	EMBL	CDS	2526338	2527450	.	-	0	ID=cds2210;Parent=gene2280;Dbxref=EnsemblGenomes-Gn:YE2323,EnsemblGenomes-Tr:CAL12379,InterPro:IPR017029,UniProtKB/TrEMBL:A1JR03,NCBI_GP:CAL12379.1;Name=CAL12379.1;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12379.1;transl_table=11
AM286415.1	EMBL	gene	2527451	2528839	.	-	.	ID=gene2281;Name=YE2324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2324
AM286415.1	EMBL	CDS	2527451	2528839	.	-	0	ID=cds2211;Parent=gene2281;Dbxref=EnsemblGenomes-Gn:YE2324,EnsemblGenomes-Tr:CAL12380,InterPro:IPR025129,UniProtKB/TrEMBL:A1JR05,NCBI_GP:CAL12380.1;Name=CAL12380.1;gbkey=CDS;product=putative phage protein;protein_id=CAL12380.1;transl_table=11
AM286415.1	EMBL	gene	2528839	2530401	.	-	.	ID=gene2282;Name=YE2325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2325
AM286415.1	EMBL	CDS	2528839	2530401	.	-	0	ID=cds2212;Parent=gene2282;Dbxref=EnsemblGenomes-Gn:YE2325,EnsemblGenomes-Tr:CAL12381,InterPro:IPR004921,UniProtKB/TrEMBL:A1JR08,NCBI_GP:CAL12381.1;Name=CAL12381.1;Note=Similar to Methanobacterium phage psiM2 large terminase subunit SWALL:O80199 (EMBL:AF065411) (468 aa) fasta scores: E(): 3.9%2C 26.72 38d in 434 aa and Bacteriophage Felix 01 hypothetical 60.1 kDa protein SWALL:O80226 (EMBL:AF071201) (533 aa) fasta scores: E(): 0.17%2C 22.96 38d in 331 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF071201;product=putative phage terminase large subunit;protein_id=CAL12381.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2530294	2530317	.	-	.	ID=id4153;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2530398	2530970	.	-	.	ID=gene2283;Name=YE2326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2326
AM286415.1	EMBL	CDS	2530398	2530970	.	-	0	ID=cds2213;Parent=gene2283;Dbxref=EnsemblGenomes-Gn:YE2326,EnsemblGenomes-Tr:CAL12382,GOA:A1JR11,InterPro:IPR005335,UniProtKB/TrEMBL:A1JR11,NCBI_GP:CAL12382.1;Name=CAL12382.1;Note=Similar to Bacteriophage SF6%2C and Bacteriophage rho-15 terminase small subunit 1 SWALL:TERS_BPSF6 (SWALL:Q38627) (151 aa) fasta scores: E(): 0.011%2C 30.06 id in 163 aa and to Bacteriophage bIL310 terminase SWALL:Q9AZI3 (EMBL:AF323671) (147 aa) fasta scores: E(): 0.0017%2C 38.46 38d in 91 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q38627;product=putative phage terminase%2C small subunit;protein_id=CAL12382.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2530461	2530964	.	-	.	ID=id4154;Note=Pfam match to entry PF03592 Terminase_small%2CTerminase small subunit%2C score 98.2%2C E-value 1e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF03592
AM286415.1	EMBL	gene	2530999	2531142	.	+	.	ID=gene2284;Name=YE2327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2327
AM286415.1	EMBL	CDS	2530999	2531142	.	+	0	ID=cds2214;Parent=gene2284;Dbxref=EnsemblGenomes-Gn:YE2327,EnsemblGenomes-Tr:CAL12383,UniProtKB/TrEMBL:A1JR15,NCBI_GP:CAL12383.1;Name=CAL12383.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12383.1;transl_table=11
AM286415.1	EMBL	gene	2531348	2531527	.	-	.	ID=gene2285;Name=YE2328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2328
AM286415.1	EMBL	CDS	2531348	2531527	.	-	0	ID=cds2215;Parent=gene2285;Dbxref=EnsemblGenomes-Gn:YE2328,EnsemblGenomes-Tr:CAL12384,UniProtKB/TrEMBL:A1JR17,NCBI_GP:CAL12384.1;Name=CAL12384.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12384.1;transl_table=11
AM286415.1	EMBL	gene	2531679	2532017	.	+	.	ID=gene2286;Name=YE2329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2329
AM286415.1	EMBL	CDS	2531679	2532017	.	+	0	ID=cds2216;Parent=gene2286;Dbxref=EnsemblGenomes-Gn:YE2329,EnsemblGenomes-Tr:CAL12385,UniProtKB/TrEMBL:A1JR19,NCBI_GP:CAL12385.1;Name=CAL12385.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12385.1;transl_table=11
AM286415.1	EMBL	gene	2532181	2532870	.	-	.	ID=gene2287;Name=YE2331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2331
AM286415.1	EMBL	CDS	2532181	2532870	.	-	0	ID=cds2217;Parent=gene2287;Dbxref=EnsemblGenomes-Gn:YE2331,EnsemblGenomes-Tr:CAL12386,InterPro:IPR014054,UniProtKB/TrEMBL:A1JR21,NCBI_GP:CAL12386.1;Name=CAL12386.1;Note=weakly similar in parts to Pasteurella multocida hypothetical protein Pm1774 SWALL:Q9CK60 (EMBL:AE006214) (239 aa) fasta scores: E(): 8.7e-14%2C 31.55 38d in 206 aa and to Bacteriophage phi-80 hypothetical protein SWALL:Q38450 (EMBL:L40418) (184 aa) fasta scores: E(): 0.014%2C 24.54 38d in 110 aa;gbkey=CDS;inference=similar to sequence:INSDC:L40418;product=hypothetical phage-related protein;protein_id=CAL12386.1;transl_table=11
AM286415.1	EMBL	gene	2533506	2533898	.	-	.	ID=gene2288;Name=YE2333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2333
AM286415.1	EMBL	CDS	2533506	2533898	.	-	0	ID=cds2218;Parent=gene2288;Dbxref=EnsemblGenomes-Gn:YE2333,EnsemblGenomes-Tr:CAL12387,UniProtKB/TrEMBL:A1JR23,NCBI_GP:CAL12387.1;Name=CAL12387.1;Note=Similar to several phage proteins including: Bacteriophage APSE-1 putative protein P14 SWALL:VP14_BPAPS (SWALL:Q9T1T4) (129 aa) fasta scores: E(): 0.00022%2C 27.86 id in 122 aa%2C Bacteriophage SfV putative lytic protein RZ SWALL:Q8SBD9 (EMBL:U82619) (130 aa) fasta scores: E(): 6.7e-08%2C 35.29 38d in 102 aa and Salmonella typhi putative bacteriophage protein Sty2043 SWALL:Q8Z618 (EMBL:AL627272) (130 aa) fasta scores: E(): 2.2e-06%2C 32.35 38d in 102 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9T1T4;product=hypothetical phage exported protein;protein_id=CAL12387.1;transl_table=11
AM286415.1	EMBL	gene	2533883	2534365	.	-	.	ID=gene2289;Name=YE2334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2334
AM286415.1	EMBL	CDS	2533883	2534365	.	-	0	ID=cds2219;Parent=gene2289;Dbxref=EnsemblGenomes-Gn:YE2334,EnsemblGenomes-Tr:CAL12388,GOA:A1JR27,InterPro:IPR002196,InterPro:IPR023346,InterPro:IPR023347,UniProtKB/TrEMBL:A1JR27,NCBI_GP:CAL12388.1;Name=CAL12388.1;gbkey=CDS;product=putative phage lysozyme;protein_id=CAL12388.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2533910	2534233	.	-	.	ID=id4155;Note=Pfam match to entry PF00959 Phage_lysozyme%2C Phage lysozyme%2C score 120.8%2C E-value 1.7e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00959
AM286415.1	EMBL	gene	2534688	2535218	.	-	.	ID=gene2290;Name=YE2335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2335
AM286415.1	EMBL	CDS	2534688	2535218	.	-	0	ID=cds2220;Parent=gene2290;Dbxref=EnsemblGenomes-Gn:YE2335,EnsemblGenomes-Tr:CAL12389,GOA:A1JR30,InterPro:IPR001471,InterPro:IPR003615,InterPro:IPR016177,UniProtKB/TrEMBL:A1JR30,NCBI_GP:CAL12389.1;Name=CAL12389.1;Note=Weakly similar in parts to Escherichia coli O157:H7 hypothetical protein Z3935 or Ecs3504 SWALL:Q8X989 (EMBL:AE005493) (201 aa) fasta scores: E(): 1.2e-18%2C38.09 38d in 168 aa and to Bacteriophage phiYeO3-12 putative hypothetical protein SWALL:Q9T140 (EMBL:AJ251805) (157 aa) fasta scores: E(): 1.2e-07%2C 35.53 38d in 121 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ251805;product=hypothetical phage protein;protein_id=CAL12389.1;transl_table=11
AM286415.1	EMBL	gene	2535454	2535942	.	-	.	ID=gene2291;Name=YE2336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2336
AM286415.1	EMBL	CDS	2535454	2535942	.	-	0	ID=cds2221;Parent=gene2291;Dbxref=EnsemblGenomes-Gn:YE2336,EnsemblGenomes-Tr:CAL12390,GOA:A1JR33,InterPro:IPR010534,UniProtKB/TrEMBL:A1JR33,NCBI_GP:CAL12390.1;Name=CAL12390.1;Note=Similar to Bacteriophage Nil2 late gene antiterminator Q SWALL:CAC95104 (EMBL:AJ413274) (162 aa) fasta scores: E(): 1.5e-46%2C 70.37 38d in 162 aa and to Bacteriophage 21 protein Q SWALL:Q9XJQ6 (EMBL:AJ237660) (161 aa) fasta scores: E(): 1e-42%2C 67.28 38d in 162 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ413274;product=putative late gene antiterminator protein;protein_id=CAL12390.1;transl_table=11
AM286415.1	EMBL	gene	2535939	2536547	.	-	.	ID=gene2292;Name=YE2337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2337
AM286415.1	EMBL	CDS	2535939	2536547	.	-	0	ID=cds2222;Parent=gene2292;Dbxref=EnsemblGenomes-Gn:YE2337,EnsemblGenomes-Tr:CAL12391,InterPro:IPR008713,UniProtKB/TrEMBL:A1JR35,NCBI_GP:CAL12391.1;Name=CAL12391.1;Note=Similar to Bacteriophage lambda protein NinG SWALL:NING_LAMBD (SWALL:P03770) (204 aa) fasta scores: E(): 1.2e-15%2C 36.53 38d in 208 aa and to Bacteriophage P22 protein NinG SWALL:NING_BPP22 (SWALL:Q38667) (203 aa) fasta scores: E(): 9e-16%2C 36.09 38d in 205 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q38667;product=NinG-like phage protein;protein_id=CAL12391.1;transl_table=11
AM286415.1	EMBL	gene	2536905	2537351	.	-	.	ID=gene2293;Name=YE2339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2339
AM286415.1	EMBL	CDS	2536905	2537351	.	-	0	ID=cds2223;Parent=gene2293;Dbxref=EnsemblGenomes-Gn:YE2339,EnsemblGenomes-Tr:CAL12392,InterPro:IPR008711,UniProtKB/TrEMBL:A1JR37,NCBI_GP:CAL12392.1;Name=CAL12392.1;Note=Similar to Bacteriophage lambda protein NinB SWALL:NINB_LAMBD (SWALL:P03765) (146 aa) fasta scores: E(): 2.2e-27%2C 52.77 38d in 144 aa%2C and to Yersinia pestis KIM putative phage protein Y2223 SWALL:AAM85783 (EMBL:AE013825) (148 aa) fasta scores: E(): 7.5e-55%2C95.94 38d in 148 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P03765;product=NinB-like phage protein;protein_id=CAL12392.1;transl_table=11
AM286415.1	EMBL	gene	2537344	2537745	.	-	.	ID=gene2294;Name=YE2340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2340
AM286415.1	EMBL	CDS	2537344	2537745	.	-	0	ID=cds2224;Parent=gene2294;Dbxref=EnsemblGenomes-Gn:YE2340,EnsemblGenomes-Tr:CAL12393,UniProtKB/TrEMBL:A1JR40,NCBI_GP:CAL12393.1;Name=CAL12393.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12393.1;transl_table=11
AM286415.1	EMBL	gene	2537742	2538044	.	-	.	ID=gene2295;Name=YE2341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2341
AM286415.1	EMBL	CDS	2537742	2538044	.	-	0	ID=cds2225;Parent=gene2295;Dbxref=EnsemblGenomes-Gn:YE2341,EnsemblGenomes-Tr:CAL12394,UniProtKB/TrEMBL:A1JR42,NCBI_GP:CAL12394.1;Name=CAL12394.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12394.1;transl_table=11
AM286415.1	EMBL	gene	2538041	2538268	.	-	.	ID=gene2296;Name=YE2342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2342
AM286415.1	EMBL	CDS	2538041	2538268	.	-	0	ID=cds2226;Parent=gene2296;Dbxref=EnsemblGenomes-Gn:YE2342,EnsemblGenomes-Tr:CAL12395,UniProtKB/TrEMBL:A1JR43,NCBI_GP:CAL12395.1;Name=CAL12395.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12395.1;transl_table=11
AM286415.1	EMBL	gene	2538309	2538902	.	+	.	ID=gene2297;Name=YE2343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2343
AM286415.1	EMBL	CDS	2538309	2538902	.	+	0	ID=cds2227;Parent=gene2297;Dbxref=EnsemblGenomes-Gn:YE2343,EnsemblGenomes-Tr:CAL12396,InterPro:IPR025285,UniProtKB/TrEMBL:A1JR47,NCBI_GP:CAL12396.1;Name=CAL12396.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12396.1;transl_table=11
AM286415.1	EMBL	gene	2539004	2539240	.	-	.	ID=gene2298;Name=YE2344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2344
AM286415.1	EMBL	CDS	2539004	2539240	.	-	0	ID=cds2228;Parent=gene2298;Dbxref=EnsemblGenomes-Gn:YE2344,EnsemblGenomes-Tr:CAL12397,UniProtKB/TrEMBL:A1JR49,NCBI_GP:CAL12397.1;Name=CAL12397.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12397.1;transl_table=11
AM286415.1	EMBL	gene	2539237	2539932	.	-	.	ID=gene2299;Name=YE2345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2345
AM286415.1	EMBL	CDS	2539237	2539932	.	-	0	ID=cds2229;Parent=gene2299;Dbxref=EnsemblGenomes-Gn:YE2345,EnsemblGenomes-Tr:CAL12398,GOA:A1JR53,InterPro:IPR009731,UniProtKB/TrEMBL:A1JR53,NCBI_GP:CAL12398.1;Name=CAL12398.1;Note=Similar to Bacteriophage lambda replication protein P SWALL:VRPP_LAMBD (SWALL:P03689) (233 aa) fasta scores: E(): 2.1e-31%2C 38.09 38d in 231 aa and to Bacteriophage 933W%2C and Stx2 converting bacteriophage I lambda replication protein P orthologue SWALL:O32558 (EMBL:Y10775) (233 aa) fasta scores: E(): 9.9e-32%2C 38.96 id in 231 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P03689;product=DNA replication protein;protein_id=CAL12398.1;transl_table=11
AM286415.1	EMBL	gene	2539929	2540828	.	-	.	ID=gene2300;Name=YE2346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2346
AM286415.1	EMBL	CDS	2539929	2540828	.	-	0	ID=cds2230;Parent=gene2300;Dbxref=EnsemblGenomes-Gn:YE2346,EnsemblGenomes-Tr:CAL12399,GOA:A1JR55,InterPro:IPR006497,UniProtKB/TrEMBL:A1JR55,NCBI_GP:CAL12399.1;Name=CAL12399.1;Note=Similar to Salmonella typhimurium hypothetical 36.5 kDa protein SWALL:O84892 (EMBL:AF001386) (325 aa) fasta scores: E(): 6e-23%2C 54.96 38d in 131 aa and to Bacteriophage HK022 DNA replication o O SWALL:Q37929 (EMBL:U02466) (299 aa) fasta scores: E(): 2.8%2C 25.4 38d in 185 aa;gbkey=CDS;inference=similar to sequence:INSDC:U02466;product=putative DNA-binding phage protein;protein_id=CAL12399.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2540379	2540444	.	-	.	ID=id4156;Note=Predicted helix-turn-helix motif with score 974.000%2C SD 2.50 at aa 129-150%2C sequence INYAEYAEKIDDSPAHNSAHIS;gbkey=misc_feature
AM286415.1	EMBL	gene	2540825	2541490	.	-	.	ID=gene2301;Name=YE2347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2347
AM286415.1	EMBL	CDS	2540825	2541490	.	-	0	ID=cds2231;Parent=gene2301;Dbxref=EnsemblGenomes-Gn:YE2347,EnsemblGenomes-Tr:CAL12400,UniProtKB/TrEMBL:A1JR57,NCBI_GP:CAL12400.1;Name=CAL12400.1;Note=Similar to Bacteriophage Mx8 hypothetical 25.3 kDa protein SWALL:O03965 (EMBL:U64984) (222 aa) fasta scores: E(): 4.4e-15%2C 34.71 38d in 242 aa and to Xylella fastidiosa phage-related protein xf0485 SWALL:Q9PG17 (EMBL:AE003898) (181 aa) fasta scores: E(): 2.5e-13%2C35.48 38d in 217 aa;gbkey=CDS;inference=similar to sequence:INSDC:U64984;product=hypothetical phage related protein;protein_id=CAL12400.1;transl_table=11
AM286415.1	EMBL	gene	2541497	2541742	.	-	.	ID=gene2302;Name=YE2348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2348
AM286415.1	EMBL	CDS	2541497	2541742	.	-	0	ID=cds2232;Parent=gene2302;Dbxref=EnsemblGenomes-Gn:YE2348,EnsemblGenomes-Tr:CAL12401,UniProtKB/TrEMBL:A1JR59,NCBI_GP:CAL12401.1;Name=CAL12401.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12401.1;transl_table=11
AM286415.1	EMBL	gene	2541846	2542118	.	-	.	ID=gene2303;Name=YE2349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2349
AM286415.1	EMBL	CDS	2541846	2542118	.	-	0	ID=cds2233;Parent=gene2303;Dbxref=EnsemblGenomes-Gn:YE2349,EnsemblGenomes-Tr:CAL12402,GOA:A1JR61,InterPro:IPR007933,InterPro:IPR010982,UniProtKB/TrEMBL:A1JR61,NCBI_GP:CAL12402.1;Name=CAL12402.1;Note=Similar to Bacteriophage P22 transcriptional activator protein CI SWALL:RPC1_BPP22 (SWALL:P03041) (92 aa) fasta scores: E(): 8.5e-14%2C 52.8 38d in 89 aa and to Bacteriophage lambda regulatory protein cII SWALL:RPC2_LAMBD (SWALL:P03042) (97 aa) fasta scores: E(): 1.9e-11%2C 48.1 38d in 79 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P03042;product=phage transcriptional regulatory protein;protein_id=CAL12402.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2541984	2542049	.	-	.	ID=id4157;Note=Predicted helix-turn-helix motif with score 1987.000%2C SD 5.95 at aa 37-58%2C sequence MGQGKFAAQMGIHESRISKWKH;gbkey=misc_feature
AM286415.1	EMBL	gene	2542234	2542458	.	-	.	ID=gene2304;Name=YE2349A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2349A
AM286415.1	EMBL	CDS	2542234	2542458	.	-	0	ID=cds2234;Parent=gene2304;Dbxref=EnsemblGenomes-Gn:YE2349A,EnsemblGenomes-Tr:CAL12403,GOA:A1JR63,InterPro:IPR001387,InterPro:IPR010982,UniProtKB/TrEMBL:A1JR63,NCBI_GP:CAL12403.1;Name=CAL12403.1;gbkey=CDS;product=phage transcriptional regulatory protein;protein_id=CAL12403.1;transl_table=11
AM286415.1	EMBL	gene	2542568	2543167	.	+	.	ID=gene2305;Name=cI;gbkey=Gene;gene=cI;gene_biotype=protein_coding;locus_tag=YE2350
AM286415.1	EMBL	CDS	2542568	2543167	.	+	0	ID=cds2235;Parent=gene2305;Dbxref=EnsemblGenomes-Gn:YE2350,EnsemblGenomes-Tr:CAL12404,GOA:A1JR65,InterPro:IPR001387,InterPro:IPR010982,InterPro:IPR015927,InterPro:IPR028360,UniProtKB/TrEMBL:A1JR65,NCBI_GP:CAL12404.1;Name=CAL12404.1;Note=Similar to Bacteriophage D3 repressor protein CI SWALL:RPC1_BPD3 (SWALL:Q37906) (223 aa) fasta scores: E(): 0.0013%2C 26.98 38d in 189 aa%2C and to Bacteriophage 434 repressor protein CI SWALL:RPC1_BP434 (SWALL:P16117) (94 aa) fasta scores: E(): 1.2%2C 29.87 38d in 77 aa;gbkey=CDS;gene=cI;inference=similar to sequence:UniProtKB:Q37906;product=repressor protein CI;protein_id=CAL12404.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2542592	2542756	.	+	.	ID=id4158;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 35.8%2C E-value 6.3e-08;gbkey=misc_feature;gene=cI;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	sequence_feature	2542622	2542687	.	+	.	ID=id4159;Note=Predicted helix-turn-helix motif with score 2331.000%2C SD 7.13 at aa 94-115%2C sequence MTQGALAKASGISQPTIWRLIK;gbkey=misc_feature;gene=cI
AM286415.1	EMBL	gene	2543486	2543716	.	-	.	ID=gene2306;Name=YE2350A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2350A
AM286415.1	EMBL	CDS	2543486	2543716	.	-	0	ID=cds2236;Parent=gene2306;Dbxref=EnsemblGenomes-Gn:YE2350A,EnsemblGenomes-Tr:CAL12405,UniProtKB/TrEMBL:A1JR69,NCBI_GP:CAL12405.1;Name=CAL12405.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12405.1;transl_table=11
AM286415.1	EMBL	gene	2544069	2544377	.	-	.	ID=gene2307;Name=YE2351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2351
AM286415.1	EMBL	CDS	2544069	2544377	.	-	0	ID=cds2237;Parent=gene2307;Dbxref=EnsemblGenomes-Gn:YE2351,EnsemblGenomes-Tr:CCP19180,UniProtKB/TrEMBL:K8FID2,NCBI_GP:CCP19180.1;Name=CCP19180.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CCP19180.1;transl_table=11
AM286415.1	EMBL	gene	2544663	2545238	.	+	.	ID=gene2308;Name=YE2352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2352
AM286415.1	EMBL	CDS	2544663	2545238	.	+	0	ID=cds2238;Parent=gene2308;Dbxref=EnsemblGenomes-Gn:YE2352,EnsemblGenomes-Tr:CAL12407,UniProtKB/TrEMBL:A1JR72,NCBI_GP:CAL12407.1;Name=CAL12407.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12407.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2544690	2544749	.	+	.	ID=id4160;Note=1 probable transmembrane helix predicted for YE2352 by TMHMM2.0 at aa 10-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2545366	2545776	.	+	.	ID=gene2309;Name=YE2353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2353
AM286415.1	EMBL	CDS	2545366	2545776	.	+	0	ID=cds2239;Parent=gene2309;Dbxref=EnsemblGenomes-Gn:YE2353,EnsemblGenomes-Tr:CAL12408,UniProtKB/TrEMBL:A1JR76,NCBI_GP:CAL12408.1;Name=CAL12408.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12408.1;transl_table=11
AM286415.1	EMBL	gene	2546079	2546744	.	+	.	ID=gene2310;Name=YE2355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2355
AM286415.1	EMBL	CDS	2546079	2546744	.	+	0	ID=cds2240;Parent=gene2310;Dbxref=EnsemblGenomes-Gn:YE2355,EnsemblGenomes-Tr:CAL12409,GOA:A1JR78,InterPro:IPR006055,InterPro:IPR012337,InterPro:IPR013520,UniProtKB/TrEMBL:A1JR78,NCBI_GP:CAL12409.1;Name=CAL12409.1;Note=Similar to Escherichia coli exodeoxyribonuclease X ExoX or b1844 SWALL:EXOX_ECOLI (SWALL:P76281) (220 aa) fasta scores: E(): 4.9e-45%2C 50.23 38d in 217 aa and to Salmonella typhimurium%2C and Salmonella typhi DNA exonuclease X%2C degrades ss and ds DNA with 3'-5' polarity ExoX or Stm1878 or Sty2084 SWALL:Q8XFN9 (EMBL:AE008783) (232 aa) fasta scores: E(): 4.5e-44%2C 49.3 38d in 217 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76281;product=exodeoxyribonuclease;protein_id=CAL12409.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2546085	2546546	.	+	.	ID=id4161;Note=Pfam match to entry PF00929 Exonuclease%2CExonuclease%2C score 109.3%2C E-value 4.8e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF00929
AM286415.1	EMBL	gene	2546744	2547409	.	+	.	ID=gene2311;Name=YE2356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2356
AM286415.1	EMBL	CDS	2546744	2547409	.	+	0	ID=cds2241;Parent=gene2311;Dbxref=EnsemblGenomes-Gn:YE2356,EnsemblGenomes-Tr:CAL12410,InterPro:IPR003593,InterPro:IPR027417,UniProtKB/TrEMBL:A1JR81,NCBI_GP:CAL12410.1;Name=CAL12410.1;Note=Similar to Bacteriophage HK620 hypothetical 25.6 kDa protein hkaL SWALL:Q9AZ29 (EMBL:AF335538) (226 aa) fasta scores: E(): 4.1e-47%2C 62.67 38d in 217 aa. Also weakly similar to Fusobacterium nucleatum DNA repair protein RadA fn0157 SWALL:Q8RGX0 (EMBL:AE010529) (452 aa) fasta scores: E(): 2.9%2C 21.17 38d in 222 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF335538;product=hypothetical phage ATP/GTP-binding protein;protein_id=CAL12410.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2546768	2546791	.	+	.	ID=id4162;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2547409	2548086	.	+	.	ID=gene2312;Name=YE2357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2357
AM286415.1	EMBL	CDS	2547409	2548086	.	+	0	ID=cds2242;Parent=gene2312;Dbxref=EnsemblGenomes-Gn:YE2357,EnsemblGenomes-Tr:CAL12411,UniProtKB/TrEMBL:A1JR82,NCBI_GP:CAL12411.1;Name=CAL12411.1;Note=Similar to Bacteriophage HK620 hypothetical 21.3 kDa protein HkaK SWALL:Q9AZ30 (EMBL:AF335538) (195 aa) fasta scores: E(): 1.2e-13%2C 37.43 38d in 179 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF335538;product=hypothetical phage protein;protein_id=CAL12411.1;transl_table=11
AM286415.1	EMBL	gene	2548482	2548850	.	+	.	ID=gene2313;Name=YE2358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2358
AM286415.1	EMBL	CDS	2548482	2548850	.	+	0	ID=cds2243;Parent=gene2313;Dbxref=EnsemblGenomes-Gn:YE2358,EnsemblGenomes-Tr:CAL12412,UniProtKB/TrEMBL:A1JR85,NCBI_GP:CAL12412.1;Name=CAL12412.1;Note=Similar to Shigella sonnei plasmid hypothetical protein CjI SWALL:Q93Q54 (EMBL:AF282884) (129 aa) fasta scores: E(): 0.0038%2C 28.33 38d in 120 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF282884;product=hypothetical exported phage protein;protein_id=CAL12412.1;transl_table=11
AM286415.1	EMBL	gene	2549000	2549503	.	+	.	ID=gene2314;Name=YE2359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2359
AM286415.1	EMBL	CDS	2549000	2549503	.	+	0	ID=cds2244;Parent=gene2314;Dbxref=EnsemblGenomes-Gn:YE2359,EnsemblGenomes-Tr:CAL12413,UniProtKB/TrEMBL:A1JR87,NCBI_GP:CAL12413.1;Name=CAL12413.1;Note=no significant database hits;gbkey=CDS;product=hypothetical phage protein;protein_id=CAL12413.1;transl_table=11
AM286415.1	EMBL	gene	2550161	2551021	.	+	.	ID=gene2315;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=YE2361
AM286415.1	EMBL	CDS	2550161	2551021	.	+	0	ID=cds2245;Parent=gene2315;Dbxref=EnsemblGenomes-Gn:YE2361,EnsemblGenomes-Tr:CAL12414,GOA:A1JR90,InterPro:IPR007757,InterPro:IPR029063,UniProtKB/TrEMBL:A1JR90,NCBI_GP:CAL12414.1;Name=CAL12414.1;Note=Similar to Enterococcus faecalis MunI-like protein SWALL:Q9L8Z8 (EMBL:AF192329) (180 aa) fasta scores: E(): 3.3e-10%2C 40.19 38d in 204 aa and to Mycoplasma sp adenine-specific modification methylase MunI muniM SWALL:MTMU_MYCSP (SWALL:P43641) (233 aa) fasta scores: E(): 4.5e-05%2C 29.43 38d in 231 aa;gbkey=CDS;gene=dam;inference=similar to sequence:UniProtKB:P43641;product=putative adenine-specific modification methylase;protein_id=CAL12414.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2550179	2550199	.	+	.	ID=id4163;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;gene=dam;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	2551018	2552763	.	+	.	ID=gene2316;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=YE2362
AM286415.1	EMBL	CDS	2551018	2552763	.	+	0	ID=cds2246;Parent=gene2316;Dbxref=EnsemblGenomes-Gn:YE2362,EnsemblGenomes-Tr:CAL12415,GOA:A1JR93,InterPro:IPR001525,InterPro:IPR029063,UniProtKB/TrEMBL:A1JR93,NCBI_GP:CAL12415.1;Name=CAL12415.1;Note=Similar to Bacteriophage phi-H cytosine methylase Dcm5A SWALL:Q38204 (EMBL:X80164) (245 aa) fasta scores: E(): 3.5e-14%2C 33.99 38d in 253 aa and to Rhizobium loti modification methylase Mlr8517 SWALL:Q982S6 (EMBL:AP003014) (667 aa) fasta scores: E(): 2.4e-27%2C35.97 38d in 656 aa%3B deleted EC_number 2.1.1.73;gbkey=CDS;gene=dcm;inference=similar to sequence:INSDC:X80164;product=putative cytosine-specific modification methylase;protein_id=CAL12415.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2551030	2552727	.	+	.	ID=id4164;Note=Pfam match to entry PF00145 DNA_methylase%2C C-5 cytosine-specific DNA methylase%2C score -74.6%2C E-value 9.1e-06;gbkey=misc_feature;gene=dcm;inference=protein motif:PFAM:PF00145
AM286415.1	EMBL	gene	2553100	2553348	.	+	.	ID=gene2317;Name=YE2363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2363
AM286415.1	EMBL	CDS	2553100	2553348	.	+	0	ID=cds2247;Parent=gene2317;Dbxref=EnsemblGenomes-Gn:YE2363,EnsemblGenomes-Tr:CAL12416,InterPro:IPR009634,UniProtKB/TrEMBL:A1JR97,NCBI_GP:CAL12416.1;Name=CAL12416.1;gbkey=CDS;product=putative phage excisionase;protein_id=CAL12416.1;transl_table=11
AM286415.1	EMBL	gene	2553376	2554665	.	+	.	ID=gene2318;Name=int;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=YE2364
AM286415.1	EMBL	CDS	2553376	2554665	.	+	0	ID=cds2248;Parent=gene2318;Dbxref=EnsemblGenomes-Gn:YE2364,EnsemblGenomes-Tr:CAL12417,GOA:A1JR99,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR022000,InterPro:IPR023109,UniProtKB/TrEMBL:A1JR99,NCBI_GP:CAL12417.1;Name=CAL12417.1;gbkey=CDS;gene=int;product=putative phage integrase;protein_id=CAL12417.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2553703	2553735	.	+	.	ID=id4165;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=int;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2553988	2554596	.	+	.	ID=id4166;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 45.8%2C E-value 6.2e-11;gbkey=misc_feature;gene=int;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	repeat_region	2554689	2554720	.	+	.	ID=id4167;Note=Direct repeat flanking prophage region%2C 32mer;gbkey=repeat_region
AM286415.1	EMBL	gene	2554690	2555136	.	-	.	ID=gene2319;Name=YE2365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2365
AM286415.1	EMBL	CDS	2554690	2555136	.	-	0	ID=cds2249;Parent=gene2319;Dbxref=EnsemblGenomes-Gn:YE2365,EnsemblGenomes-Tr:CAL12418,InterPro:IPR005358,InterPro:IPR008228,NCBI_GP:CAL12418.1;Name=CAL12418.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12418.1;transl_table=11
AM286415.1	EMBL	gene	2555251	2555907	.	-	.	ID=gene2320;Name=YE2366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2366
AM286415.1	EMBL	CDS	2555251	2555907	.	-	0	ID=cds2250;Parent=gene2320;Dbxref=EnsemblGenomes-Gn:YE2366,EnsemblGenomes-Tr:CAL12419,GOA:A1JRA5,InterPro:IPR002529,InterPro:IPR011234,UniProtKB/TrEMBL:A1JRA5,NCBI_GP:CAL12419.1;Name=CAL12419.1;gbkey=CDS;product=putative fumarylacetoacetate hydrolase family protein;protein_id=CAL12419.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2555308	2555811	.	-	.	ID=id4168;Note=Pfam match to entry PF01557 FAA_hydrolase%2CFumarylacetoacetate (FAA) hydrolase family%2C score 247.5%2CE-value 1.2e-71;gbkey=misc_feature;inference=protein motif:PFAM:PF01557
AM286415.1	EMBL	gene	2555988	2556911	.	-	.	ID=gene2321;Name=YE2367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2367
AM286415.1	EMBL	CDS	2555988	2556911	.	-	0	ID=cds2251;Parent=gene2321;Dbxref=EnsemblGenomes-Gn:YE2367,EnsemblGenomes-Tr:CAL12420,InterPro:IPR011757,InterPro:IPR011970,InterPro:IPR023346,UniProtKB/TrEMBL:A1JRA8,NCBI_GP:CAL12420.1;Name=CAL12420.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL12420.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2556798	2556863	.	-	.	ID=id4169;Note=Predicted helix-turn-helix motif with score 1020.000%2C SD 2.66 at aa 17-38%2C sequence EQLKAQARAQGISEATLEIAFA;gbkey=misc_feature
AM286415.1	EMBL	gene	2557100	2557372	.	-	.	ID=gene2322;Name=YE2368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2368
AM286415.1	EMBL	CDS	2557100	2557372	.	-	0	ID=cds2252;Parent=gene2322;Dbxref=EnsemblGenomes-Gn:YE2368,EnsemblGenomes-Tr:CAL12421,InterPro:IPR027354,NCBI_GP:CAL12421.1;Name=CAL12421.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12421.1;transl_table=11
AM286415.1	EMBL	gene	2557576	2557941	.	-	.	ID=gene2323;Name=YE2370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2370
AM286415.1	EMBL	CDS	2557576	2557941	.	-	0	ID=cds2253;Parent=gene2323;Dbxref=EnsemblGenomes-Gn:YE2370,EnsemblGenomes-Tr:CAL12422,UniProtKB/TrEMBL:A1JRB3,NCBI_GP:CAL12422.1;Name=CAL12422.1;Note=no significant database hits. Note that this CDS is rich in the amino acids Gln%2C Lys%2C Ala and Ser;gbkey=CDS;product=putative exported protein;protein_id=CAL12422.1;transl_table=11
AM286415.1	EMBL	gene	2558490	2559176	.	+	.	ID=gene2324;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=YE2371
AM286415.1	EMBL	CDS	2558490	2559176	.	+	0	ID=cds2254;Parent=gene2324;Dbxref=EnsemblGenomes-Gn:YE2371,EnsemblGenomes-Tr:CAL12423,GOA:A1JRB5,InterPro:IPR005526,InterPro:IPR007874,InterPro:IPR013033,InterPro:IPR016098,NCBI_GP:CAL12423.1;Name=CAL12423.1;gbkey=CDS;gene=minC;product=cell division inhibitor;protein_id=CAL12423.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2558667	2559170	.	+	.	ID=id4170;Note=Pfam match to entry PF03775 MinC%2C Septum formation inhibitor MinC%2C score 246.5%2C E-value 2.4e-71;gbkey=misc_feature;gene=minC;inference=protein motif:PFAM:PF03775
AM286415.1	EMBL	gene	2559202	2560014	.	+	.	ID=gene2325;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=YE2372
AM286415.1	EMBL	CDS	2559202	2560014	.	+	0	ID=cds2255;Parent=gene2325;Dbxref=EnsemblGenomes-Gn:YE2372,EnsemblGenomes-Tr:CAL12424,GOA:A1JRB7,InterPro:IPR002586,InterPro:IPR010223,InterPro:IPR025501,InterPro:IPR027417,UniProtKB/TrEMBL:A1JRB7,NCBI_GP:CAL12424.1;Name=CAL12424.1;gbkey=CDS;gene=minD;product=septum site-determining protein;protein_id=CAL12424.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2559205	2559312	.	+	.	ID=id4171;Note=Pfam match to entry PF02374 ArsA_ATPase%2CAnion-transporting ATPase%2C score 38.5%2C E-value 7.7e-11;gbkey=misc_feature;gene=minD;inference=protein motif:PFAM:PF02374
AM286415.1	EMBL	sequence_feature	2559229	2559252	.	+	.	ID=id4172;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=minD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2559436	2559780	.	+	.	ID=id4173;Note=Pfam match to entry PF00991 ParA%2C ParA family ATPase%2C score 26.8%2C E-value 6.1e-06;gbkey=misc_feature;gene=minD;inference=protein motif:PFAM:PF00991
AM286415.1	EMBL	gene	2560018	2560287	.	+	.	ID=gene2326;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=YE2373
AM286415.1	EMBL	CDS	2560018	2560287	.	+	0	ID=cds2256;Parent=gene2326;Dbxref=EnsemblGenomes-Gn:YE2373,EnsemblGenomes-Tr:CAL12425,GOA:A1JRC1,InterPro:IPR005527,NCBI_GP:CAL12425.1;Name=CAL12425.1;gbkey=CDS;gene=minE;product=cell division topological specificity factor;protein_id=CAL12425.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2560024	2560266	.	+	.	ID=id4174;Note=Pfam match to entry PF03776 MinE%2C Septum formation topological specificity factor MinE%2C score 165.4%2C E-value 6e-47;gbkey=misc_feature;gene=minE;inference=protein motif:PFAM:PF03776
AM286415.1	EMBL	gene	2560426	2561547	.	-	.	ID=gene2327;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=YE2374
AM286415.1	EMBL	CDS	2560426	2561547	.	-	0	ID=cds2257;Parent=gene2327;Dbxref=EnsemblGenomes-Gn:YE2374,EnsemblGenomes-Tr:CAL12426,GOA:A1JRC4,InterPro:IPR002121,InterPro:IPR002562,InterPro:IPR006292,InterPro:IPR010997,InterPro:IPR012337,UniProtKB/TrEMBL:A1JRC4,NCBI_GP:CAL12426.1;Name=CAL12426.1;gbkey=CDS;gene=rnd;product=ribonuclease D;protein_id=CAL12426.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2560681	2560920	.	-	.	ID=id4175;Note=Pfam match to entry PF00570 HRDC%2C HRDC domain %2Cscore 75.9%2C E-value 5.6e-20;gbkey=misc_feature;gene=rnd;inference=protein motif:PFAM:PF00570
AM286415.1	EMBL	sequence_feature	2561035	2561547	.	-	.	ID=id4176;Note=Pfam match to entry PF01612 3_5_exonuclease%2C 3'-5' exonuclease%2C score 157.9%2C E-value 1.1e-44;gbkey=misc_feature;gene=rnd;inference=protein motif:PFAM:PF01612
AM286415.1	EMBL	gene	2561645	2563339	.	-	.	ID=gene2328;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=YE2375
AM286415.1	EMBL	CDS	2561645	2563339	.	-	0	ID=cds2258;Parent=gene2328;Dbxref=EnsemblGenomes-Gn:YE2375,EnsemblGenomes-Tr:CAL12427,GOA:A1JRC7,InterPro:IPR000873,InterPro:IPR020845,InterPro:IPR025110,UniProtKB/TrEMBL:A1JRC7,NCBI_GP:CAL12427.1;Name=CAL12427.1;gbkey=CDS;gene=fadD;product=long-chain-fatty-acid-CoA ligase;protein_id=CAL12427.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2561885	2563192	.	-	.	ID=id4177;Note=Pfam match to entry PF00501 AMP-binding%2CAMP-binding enzyme%2C score 440.9%2C E-value 7.3e-130;gbkey=misc_feature;gene=fadD;inference=protein motif:PFAM:PF00501
AM286415.1	EMBL	sequence_feature	2562674	2562709	.	-	.	ID=id4178;Note=PS00455 Putative AMP-binding domain signature.;gbkey=misc_feature;gene=fadD;inference=protein motif:Prosite:PS00455
AM286415.1	EMBL	sequence_feature	2562818	2562865	.	-	.	ID=id4179;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature.;gbkey=misc_feature;gene=fadD;inference=protein motif:Prosite:PS00038
AM286415.1	EMBL	gene	2563680	2564231	.	-	.	ID=gene2329;Name=YE2376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2376
AM286415.1	EMBL	CDS	2563680	2564231	.	-	0	ID=cds2259;Parent=gene2329;Dbxref=EnsemblGenomes-Gn:YE2376,EnsemblGenomes-Tr:CAL12428,GOA:A1JRD0,InterPro:IPR004658,UniProtKB/TrEMBL:A1JRD0,NCBI_GP:CAL12428.1;Name=CAL12428.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL12428.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2563722	2564198	.	-	.	ID=id4180;Note=Pfam match to entry PF03843 Slp%2C Outer membrane lipoprotein Slp family%2C score 265.7%2C E-value 4e-77;gbkey=misc_feature;inference=protein motif:PFAM:PF03843
AM286415.1	EMBL	sequence_feature	2564187	2564219	.	-	.	ID=id4181;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2564392	2565090	.	-	.	ID=gene2330;Name=YE2377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2377
AM286415.1	EMBL	CDS	2564392	2565090	.	-	0	ID=cds2260;Parent=gene2330;Dbxref=EnsemblGenomes-Gn:YE2377,EnsemblGenomes-Tr:CAL12429,GOA:A1JRD4,InterPro:IPR000905,InterPro:IPR022496,UniProtKB/TrEMBL:A1JRD4,NCBI_GP:CAL12429.1;Name=CAL12429.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12429.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2564887	2565003	.	-	.	ID=id4182;Note=Pfam match to entry PF00814 Peptidase_M22%2CGlycoprotease family%2C score 18.6%2C E-value 1.2e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00814
AM286415.1	EMBL	gene	2565165	2566991	.	-	.	ID=gene2331;Name=YE2378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2378
AM286415.1	EMBL	CDS	2565165	2566991	.	-	0	ID=cds2261;Parent=gene2331;Dbxref=EnsemblGenomes-Gn:YE2378,EnsemblGenomes-Tr:CAL12430,GOA:A1JRD7,InterPro:IPR006555,InterPro:IPR010614,InterPro:IPR014013,InterPro:IPR027417,UniProtKB/TrEMBL:A1JRD7,NCBI_GP:CAL12430.1;Name=CAL12430.1;gbkey=CDS;product=putative DEAD box family helicase;protein_id=CAL12430.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2566914	2566937	.	-	.	ID=id4183;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2567198	2567542	.	+	.	ID=gene2332;Name=YE2379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2379
AM286415.1	EMBL	CDS	2567198	2567542	.	+	0	ID=cds2262;Parent=gene2332;Dbxref=EnsemblGenomes-Gn:YE2379,EnsemblGenomes-Tr:CAL12431,InterPro:IPR006175,InterPro:IPR013813,InterPro:IPR019897,UniProtKB/TrEMBL:A1JRD9,NCBI_GP:CAL12431.1;Name=CAL12431.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12431.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2567207	2567539	.	+	.	ID=id4184;Note=Pfam match to entry PF01042 UPF0076%2CEndoribonuclease L-PSP%2C score 106.6%2C E-value 3.2e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF01042
AM286415.1	EMBL	sequence_feature	2567465	2567521	.	+	.	ID=id4185;Note=PS01094 Uncharacterized protein family UPF0076 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01094
AM286415.1	EMBL	gene	2567675	2567965	.	-	.	ID=gene2333;Name=YE2380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2380
AM286415.1	EMBL	CDS	2567675	2567965	.	-	0	ID=cds2263;Parent=gene2333;Dbxref=EnsemblGenomes-Gn:YE2380,EnsemblGenomes-Tr:CAL12432,GOA:A1JRE5,InterPro:IPR000390,InterPro:IPR023737,NCBI_GP:CAL12432.1;Name=CAL12432.1;gbkey=CDS;product=putative integral membrane protein;protein_id=CAL12432.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2567837	2567905	.	-	.	ID=id4186;Note=3 probable transmembrane helices predicted for YE2380 by TMHMM2.0 at aa 21-43%2C 48-70 and 75-93;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2567756	2567824	.	-	.	ID=id4186;Note=3 probable transmembrane helices predicted for YE2380 by TMHMM2.0 at aa 21-43%2C 48-70 and 75-93;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2567687	2567743	.	-	.	ID=id4186;Note=3 probable transmembrane helices predicted for YE2380 by TMHMM2.0 at aa 21-43%2C 48-70 and 75-93;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	2567708	2567965	.	-	.	ID=id4187;Note=Pfam match to entry PF00893 DUF7%2C Integral membrane protein DUF7%2C score 113.5%2C E-value 2.7e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF00893
AM286415.1	EMBL	gene	2567991	2568371	.	-	.	ID=gene2334;Name=YE2381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2381
AM286415.1	EMBL	CDS	2567991	2568371	.	-	0	ID=cds2264;Parent=gene2334;Dbxref=EnsemblGenomes-Gn:YE2381,EnsemblGenomes-Tr:CAL12433,GOA:A1JRE8,InterPro:IPR000390,InterPro:IPR023740,NCBI_GP:CAL12433.1;Name=CAL12433.1;Note=Similar to many other putative membrane integral proteins including: Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YdgF or b1600 or z2594 or ecs2306 SWALL:YDGF_ECOLI (SWALL:P77412) (121 aa) fasta scores: E(): 4.8e-25%2C 72.32 38d in 112 aa%2C Pseudomonas aeruginosa probable drug efflux transporter pa1541 SWALL:Q9I3H2 (EMBL:AE004582) (122 aa) fasta scores: E(): 4.4e-18%2C 52.5 38d in 120 aa and Rhizobium meliloti putative multidrug transmembrane resistance signal peptide protein R01614 or Smc01179 SWALL:Q92PW0 (EMBL:AL591787) (114 aa) fasta scores: E(): 5.5e-14%2C 48.57 38d in 105 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77412;product=putative inner membrane protein;protein_id=CAL12433.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2568297	2568365	.	-	.	ID=id4188;Note=4 probable transmembrane helices predicted for YE2381 by TMHMM2.0 at aa 3-25%2C 35-52%2C 57-79 and 89-106;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2568216	2568269	.	-	.	ID=id4188;Note=4 probable transmembrane helices predicted for YE2381 by TMHMM2.0 at aa 3-25%2C 35-52%2C 57-79 and 89-106;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2568135	2568203	.	-	.	ID=id4188;Note=4 probable transmembrane helices predicted for YE2381 by TMHMM2.0 at aa 3-25%2C 35-52%2C 57-79 and 89-106;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2568054	2568107	.	-	.	ID=id4188;Note=4 probable transmembrane helices predicted for YE2381 by TMHMM2.0 at aa 3-25%2C 35-52%2C 57-79 and 89-106;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	2568087	2568365	.	-	.	ID=id4189;Note=Pfam match to entry PF00893 DUF7%2C Integral membrane protein DUF7%2C score 113.3%2C E-value 3.1e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF00893
AM286415.1	EMBL	gene	2568967	2569608	.	-	.	ID=gene2335;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;gene_synonym=hga,kdgA;locus_tag=YE2382
AM286415.1	EMBL	CDS	2568967	2569608	.	-	0	ID=cds2265;Parent=gene2335;Dbxref=EnsemblGenomes-Gn:YE2382,EnsemblGenomes-Tr:CAL12434,GOA:A1JRF1,InterPro:IPR000887,InterPro:IPR013785,UniProtKB/TrEMBL:A1JRF1,NCBI_GP:CAL12434.1;Name=CAL12434.1;gbkey=CDS;gene=eda;product=KHG/KDPG aldolase;protein_id=CAL12434.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2569000	2569587	.	-	.	ID=id4190;Note=Pfam match to entry PF01081 Aldolase%2C KDPG and KHG aldolase%2C score 451.4%2C E-value 5.1e-133;gbkey=misc_feature;gene=eda;inference=protein motif:PFAM:PF01081
AM286415.1	EMBL	sequence_feature	2569186	2569227	.	-	.	ID=id4191;Note=PS00160 KDPG and KHG aldolases Schiff-base forming residue.;gbkey=misc_feature;gene=eda;inference=protein motif:Prosite:PS00160
AM286415.1	EMBL	sequence_feature	2569462	2569491	.	-	.	ID=id4192;Note=PS00159 KDPG and KHG aldolases active site.;gbkey=misc_feature;gene=eda;inference=protein motif:Prosite:PS00159
AM286415.1	EMBL	gene	2569863	2571347	.	-	.	ID=gene2336;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=YE2383
AM286415.1	EMBL	CDS	2569863	2571347	.	-	0	ID=cds2266;Parent=gene2336;Dbxref=EnsemblGenomes-Gn:YE2383,EnsemblGenomes-Tr:CAL12435,GOA:A1JRF5,InterPro:IPR001282,InterPro:IPR016040,InterPro:IPR019796,InterPro:IPR022674,InterPro:IPR022675,UniProtKB/TrEMBL:A1JRF5,NCBI_GP:CAL12435.1;Name=CAL12435.1;gbkey=CDS;gene=zwf;product=glucose-6-phosphate 1-dehydrogenase;protein_id=CAL12435.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2569869	2570777	.	-	.	ID=id4193;Note=Pfam match to entry PF02781 G6PD_C%2CGlucose-6-phosphate dehydrogenase%2C C-terminal domain %2Cscore 635.8%2C E-value 1.5e-188;gbkey=misc_feature;gene=zwf;inference=protein motif:PFAM:PF02781
AM286415.1	EMBL	sequence_feature	2570781	2571326	.	-	.	ID=id4194;Note=Pfam match to entry PF00479 G6PD%2CGlucose-6-phosphate dehydrogenase%2C NAD binding domain %2Cscore 330.6%2C E-value 1.1e-96;gbkey=misc_feature;gene=zwf;inference=protein motif:PFAM:PF00479
AM286415.1	EMBL	sequence_feature	2570793	2570813	.	-	.	ID=id4195;Note=PS00069 Glucose-6-phosphate dehydrogenase active site.;gbkey=misc_feature;gene=zwf;inference=protein motif:Prosite:PS00069
AM286415.1	EMBL	sequence_feature	2571309	2571341	.	-	.	ID=id4196;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=zwf;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2571700	2572569	.	+	.	ID=gene2337;Name=hexR;gbkey=Gene;gene=hexR;gene_biotype=protein_coding;locus_tag=YE2384
AM286415.1	EMBL	CDS	2571700	2572569	.	+	0	ID=cds2267;Parent=gene2337;Dbxref=EnsemblGenomes-Gn:YE2384,EnsemblGenomes-Tr:CAL12436,GOA:A1JRG1,InterPro:IPR000281,InterPro:IPR001347,InterPro:IPR009057,InterPro:IPR011991,UniProtKB/TrEMBL:A1JRG1,NCBI_GP:CAL12436.1;Name=CAL12436.1;gbkey=CDS;gene=hexR;product=hex regulon repressor;protein_id=CAL12436.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2571700	2572017	.	+	.	ID=id4197;Note=Pfam match to entry PF01418 HTH_6%2C Helix-turn-helix domain%2C rpiR family%2C score 179.1%2C E-value 4.6e-51;gbkey=misc_feature;gene=hexR;inference=protein motif:PFAM:PF01418
AM286415.1	EMBL	sequence_feature	2571802	2571867	.	+	.	ID=id4198;Note=Predicted helix-turn-helix motif with score 1648.000%2C SD 4.80 at aa 35-56%2C sequence SSIATLAKLANVSEPTVNRFCR;gbkey=misc_feature;gene=hexR
AM286415.1	EMBL	sequence_feature	2572063	2572467	.	+	.	ID=id4199;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 118.3%2C E-value 9.5e-33;gbkey=misc_feature;gene=hexR;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	gene	2572789	2574231	.	+	.	ID=gene2338;Name=pykA;gbkey=Gene;gene=pykA;gene_biotype=protein_coding;locus_tag=YE2385
AM286415.1	EMBL	CDS	2572789	2574231	.	+	0	ID=cds2268;Parent=gene2338;Dbxref=EnsemblGenomes-Gn:YE2385,EnsemblGenomes-Tr:CAL12437,GOA:A1JRG5,InterPro:IPR001697,InterPro:IPR011037,InterPro:IPR015793,InterPro:IPR015794,InterPro:IPR015795,InterPro:IPR015806,InterPro:IPR015813,InterPro:IPR018209,UniProtKB/TrEMBL:A1JRG5,NCBI_GP:CAL12437.1;Name=CAL12437.1;gbkey=CDS;gene=pykA;product=pyruvate kinase II;protein_id=CAL12437.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2572792	2573841	.	+	.	ID=id4200;Note=Pfam match to entry PF00224 PK%2C Pyruvate kinase%2Cbarrel domain%2C score 740.7%2C E-value 4.1e-220;gbkey=misc_feature;gene=pykA;inference=protein motif:PFAM:PF00224
AM286415.1	EMBL	sequence_feature	2573440	2573478	.	+	.	ID=id4201;Note=PS00110 Pyruvate kinase active site signature.;gbkey=misc_feature;gene=pykA;inference=protein motif:Prosite:PS00110
AM286415.1	EMBL	sequence_feature	2573872	2574222	.	+	.	ID=id4202;Note=Pfam match to entry PF02887 PK_C%2C Pyruvate kinase%2Calpha/beta domain%2C score 201.1%2C E-value 1.1e-57;gbkey=misc_feature;gene=pykA;inference=protein motif:PFAM:PF02887
AM286415.1	EMBL	gene	2574322	2575284	.	-	.	ID=gene2339;Name=msbB;gbkey=Gene;gene=msbB;gene_biotype=protein_coding;locus_tag=YE2386
AM286415.1	EMBL	CDS	2574322	2575284	.	-	0	ID=cds2269;Parent=gene2339;Dbxref=EnsemblGenomes-Gn:YE2386,EnsemblGenomes-Tr:CAL12438,GOA:A1JRH3,InterPro:IPR004960,InterPro:IPR011921,UniProtKB/TrEMBL:A1JRH3,NCBI_GP:CAL12438.1;Name=CAL12438.1;gbkey=CDS;gene=msbB;product=lipid A biosynthesis acyltransferase;protein_id=CAL12438.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2574367	2575251	.	-	.	ID=id4203;Note=Pfam match to entry PF03279 Lip_A_acyltrans%2CBacterial lipid A biosynthesis acyltransferase%2C score 450.8%2C E-value 7.5e-133;gbkey=misc_feature;gene=msbB;inference=protein motif:PFAM:PF03279
AM286415.1	EMBL	sequence_feature	2575162	2575215	.	-	.	ID=id4204;Note=1 probable transmembrane helix predicted for YE2386 by TMHMM2.0 at aa 24-41;gbkey=misc_feature;gene=msbB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2575368	2576621	.	-	.	ID=gene2340;Name=YE2387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2387
AM286415.1	EMBL	CDS	2575368	2576621	.	-	0	ID=cds2270;Parent=gene2340;Dbxref=EnsemblGenomes-Gn:YE2387,EnsemblGenomes-Tr:CAL12439,InterPro:IPR007340,InterPro:IPR011055,InterPro:IPR016047,InterPro:IPR018392,UniProtKB/TrEMBL:A1JRH7,NCBI_GP:CAL12439.1;Name=CAL12439.1;gbkey=CDS;product=putative M23/M37 peptidase-family protein;protein_id=CAL12439.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2575461	2575709	.	-	.	ID=id4205;Note=Pfam match to entry PF01551 Peptidase_M37%2CPeptidase family M23/M37%2C score 142.4%2C E-value 5.3e-40;gbkey=misc_feature;inference=protein motif:PFAM:PF01551
AM286415.1	EMBL	sequence_feature	2576262	2576396	.	-	.	ID=id4206;Note=Pfam match to entry PF01476 LysM%2C LysM domain %2Cscore 23.1%2C E-value 0.00044;gbkey=misc_feature;inference=protein motif:PFAM:PF01476
AM286415.1	EMBL	gene	2576699	2577661	.	-	.	ID=gene2341;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=YE2388
AM286415.1	EMBL	CDS	2576699	2577661	.	-	0	ID=cds2271;Parent=gene2341;Dbxref=EnsemblGenomes-Gn:YE2388,EnsemblGenomes-Tr:CAL12440,GOA:A1JRI0,InterPro:IPR006127,UniProtKB/TrEMBL:A1JRI0,NCBI_GP:CAL12440.1;Name=CAL12440.1;gbkey=CDS;gene=znuA;product=exported high-affinity zinc uptake system protein;protein_id=CAL12440.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2576708	2577631	.	-	.	ID=id4207;Note=Pfam match to entry PF01297 SBP_bac_9%2C Periplasmic solute binding protein family%2C score 114.7%2C E-value 1.1e-31;gbkey=misc_feature;gene=znuA;inference=protein motif:PFAM:PF01297
AM286415.1	EMBL	sequence_feature	2577560	2577628	.	-	.	ID=id4208;Note=1 probable transmembrane helix predicted for YE2388 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;gene=znuA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2577737	2578495	.	+	.	ID=gene2342;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=YE2389
AM286415.1	EMBL	CDS	2577737	2578495	.	+	0	ID=cds2272;Parent=gene2342;Dbxref=EnsemblGenomes-Gn:YE2389,EnsemblGenomes-Tr:CAL12441,GOA:A1JRI2,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017882,InterPro:IPR027417,NCBI_GP:CAL12441.1;Name=CAL12441.1;gbkey=CDS;gene=znuC;product=high-affinity zinc uptake system ATP-binding protein;protein_id=CAL12441.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2577824	2578327	.	+	.	ID=id4209;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 174.2%2C E-value 1.4e-49;gbkey=misc_feature;gene=znuC;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2577845	2577868	.	+	.	ID=id4210;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=znuC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2578492	2579277	.	+	.	ID=gene2343;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=YE2390
AM286415.1	EMBL	CDS	2578492	2579277	.	+	0	ID=cds2273;Parent=gene2343;Dbxref=EnsemblGenomes-Gn:YE2390,EnsemblGenomes-Tr:CAL12442,GOA:A1JRI5,InterPro:IPR001626,InterPro:IPR029022,UniProtKB/TrEMBL:A1JRI5,NCBI_GP:CAL12442.1;Name=CAL12442.1;gbkey=CDS;gene=znuB;product=high-affinity zinc uptake system membrane protein;protein_id=CAL12442.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2578492	2579265	.	+	.	ID=id4211;Note=Pfam match to entry PF00950 ABC-3%2C ABC 3 transport family%2C score 394.6%2C E-value 6.3e-116;gbkey=misc_feature;gene=znuB;inference=protein motif:PFAM:PF00950
AM286415.1	EMBL	sequence_feature	2578504	2578572	.	+	.	ID=id4212;Note=7 probable transmembrane helices predicted for YE2390 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 119-141%2C170-192%2C 213-235 and 239-256;gbkey=misc_feature;gene=znuB;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	2578633	2578701	.	+	.	ID=id4212;Note=7 probable transmembrane helices predicted for YE2390 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 119-141%2C170-192%2C 213-235 and 239-256;gbkey=misc_feature;gene=znuB;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	2578744	2578812	.	+	.	ID=id4212;Note=7 probable transmembrane helices predicted for YE2390 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 119-141%2C170-192%2C 213-235 and 239-256;gbkey=misc_feature;gene=znuB;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	2578846	2578914	.	+	.	ID=id4212;Note=7 probable transmembrane helices predicted for YE2390 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 119-141%2C170-192%2C 213-235 and 239-256;gbkey=misc_feature;gene=znuB;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	2578999	2579067	.	+	.	ID=id4212;Note=7 probable transmembrane helices predicted for YE2390 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 119-141%2C170-192%2C 213-235 and 239-256;gbkey=misc_feature;gene=znuB;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	2579128	2579196	.	+	.	ID=id4212;Note=7 probable transmembrane helices predicted for YE2390 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 119-141%2C170-192%2C 213-235 and 239-256;gbkey=misc_feature;gene=znuB;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	2579206	2579259	.	+	.	ID=id4212;Note=7 probable transmembrane helices predicted for YE2390 by TMHMM2.0 at aa 5-27%2C 48-70%2C 85-107%2C 119-141%2C170-192%2C 213-235 and 239-256;gbkey=misc_feature;gene=znuB;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	2579738	2581219	.	+	.	ID=gene2344;Name=YE2391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2391
AM286415.1	EMBL	CDS	2579738	2581219	.	+	0	ID=cds2274;Parent=gene2344;Dbxref=EnsemblGenomes-Gn:YE2391,EnsemblGenomes-Tr:CAL12443,GOA:A1JRI8,InterPro:IPR000109,InterPro:IPR005279,InterPro:IPR016196,InterPro:IPR018456,InterPro:IPR023778,NCBI_GP:CAL12443.1;Name=CAL12443.1;Note=Similar to many amino acid transport proteins including: Lactococcus lactis di-/tripeptide transporter DtpT or ll0702 SWALL:DTPT_LACLA (SWALL:P36574) (497 aa) fasta scores: E(): 1.9e-19%2C 29.69 38d in 495 aa and to Salmonella typhi putative PTR2 family transport protein Sty4211 SWALL:Q8Z269 (EMBL:AL627281) (489 aa) fasta scores: E(): 7.9e-160%2C 82.82 38d in 489 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P36574;product=putative peptide transporter;protein_id=CAL12443.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2579819	2579878	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	2579891	2579959	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	2579993	2580046	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	2580059	2580127	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	2580164	2580232	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	2580245	2580313	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	2580374	2580433	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	2580443	2580502	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	2580539	2580607	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	2580677	2580745	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	2580782	2580850	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	2580893	2580961	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	2580980	2581048	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	2581106	2581174	.	+	.	ID=id4213;Note=14 probable transmembrane helices predicted for YE2391 by TMHMM2.0 at aa 28-47%2C 52-74%2C 86-103%2C 108-130%2C143-165%2C 170-192%2C 213-232%2C 236-255%2C 268-290%2C 314-336%2C349-371%2C 386-408%2C 415-437 and 457-479;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	sequence_feature	2579978	2581021	.	+	.	ID=id4214;Note=Pfam match to entry PF00854 PTR2%2C POT family %2Cscore 321.4%2C E-value 6.9e-94;gbkey=misc_feature;inference=protein motif:PFAM:PF00854
AM286415.1	EMBL	sequence_feature	2580170	2580208	.	+	.	ID=id4215;Note=PS01023 PTR2 family proton/oligopeptide symporters signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01023
AM286415.1	EMBL	gene	2581270	2582274	.	-	.	ID=gene2345;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=YE2392
AM286415.1	EMBL	CDS	2581270	2582274	.	-	0	ID=cds2275;Parent=gene2345;Dbxref=EnsemblGenomes-Gn:YE2392,EnsemblGenomes-Tr:CAL12444,GOA:A1JRJ5,InterPro:IPR003593,InterPro:IPR004605,InterPro:IPR008823,InterPro:IPR008824,InterPro:IPR011991,InterPro:IPR027417,NCBI_GP:CAL12444.1;Name=CAL12444.1;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase;protein_id=CAL12444.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2581555	2582106	.	-	.	ID=id4216;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 123.8%2C E-value 2.1e-34;gbkey=misc_feature;gene=ruvB;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	2582068	2582091	.	-	.	ID=id4217;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ruvB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2582310	2582927	.	-	.	ID=gene2346;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=YE2393
AM286415.1	EMBL	CDS	2582310	2582927	.	-	0	ID=cds2276;Parent=gene2346;Dbxref=EnsemblGenomes-Gn:YE2393,EnsemblGenomes-Tr:CAL12445,GOA:A1JRJ9,InterPro:IPR000085,InterPro:IPR003583,InterPro:IPR010994,InterPro:IPR011114,InterPro:IPR012340,InterPro:IPR013849,NCBI_GP:CAL12445.1;Name=CAL12445.1;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase;protein_id=CAL12445.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2582517	2582735	.	-	.	ID=id4218;Note=Pfam match to entry PF02904 RuvA_II%2C RuvA central domain II%2C score 144.4%2C E-value 1.3e-40;gbkey=misc_feature;gene=ruvA;inference=protein motif:PFAM:PF02904
AM286415.1	EMBL	sequence_feature	2582739	2582927	.	-	.	ID=id4219;Note=Pfam match to entry PF01330 RuvA%2C RuvA N terminal domain%2C score 115.1%2C E-value 8.7e-32;gbkey=misc_feature;gene=ruvA;inference=protein motif:PFAM:PF01330
AM286415.1	EMBL	gene	2583050	2583571	.	-	.	ID=gene2347;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=YE2394
AM286415.1	EMBL	CDS	2583050	2583571	.	-	0	ID=cds2277;Parent=gene2347;Dbxref=EnsemblGenomes-Gn:YE2394,EnsemblGenomes-Tr:CAL12446,GOA:A1JRK2,InterPro:IPR002176,InterPro:IPR012337,InterPro:IPR020563,NCBI_GP:CAL12446.1;Name=CAL12446.1;gbkey=CDS;gene=ruvC;product=crossover junction endodeoxyribonuclease;protein_id=CAL12446.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2583122	2583562	.	-	.	ID=id4220;Note=Pfam match to entry PF02075 RuvC%2C Crossover junction endodeoxyribonuclease RuvC%2C score 321.1%2C E-value 8.2e-94;gbkey=misc_feature;gene=ruvC;inference=protein motif:PFAM:PF02075
AM286415.1	EMBL	sequence_feature	2583131	2583235	.	-	.	ID=id4221;Note=PS01321 Crossover junction endodeoxyribonuclease ruvC signature.;gbkey=misc_feature;gene=ruvC;inference=protein motif:Prosite:PS01321
AM286415.1	EMBL	gene	2583739	2584482	.	-	.	ID=gene2348;Name=YE2395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2395
AM286415.1	EMBL	CDS	2583739	2584482	.	-	0	ID=cds2278;Parent=gene2348;Dbxref=EnsemblGenomes-Gn:YE2395,EnsemblGenomes-Tr:CAL12447,GOA:A1JRK5,InterPro:IPR002876,InterPro:IPR017856,InterPro:IPR026563,InterPro:IPR026564,InterPro:IPR029072,NCBI_GP:CAL12447.1;Name=CAL12447.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12447.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2583769	2584470	.	-	.	ID=id4222;Note=Pfam match to entry PF01709 DUF28%2C Domain of unknown function DUF28%2C score 476.1%2C E-value 1.8e-140;gbkey=misc_feature;inference=protein motif:PFAM:PF01709
AM286415.1	EMBL	gene	2584623	2585045	.	-	.	ID=gene2349;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;gene_synonym=ntpA;locus_tag=YE2396
AM286415.1	EMBL	CDS	2584623	2585045	.	-	0	ID=cds2279;Parent=gene2349;Dbxref=EnsemblGenomes-Gn:YE2396,EnsemblGenomes-Tr:CAL12448,GOA:A1JRK7,InterPro:IPR000086,InterPro:IPR003564,InterPro:IPR015797,InterPro:IPR020084,UniProtKB/TrEMBL:A1JRK7,NCBI_GP:CAL12448.1;Name=CAL12448.1;gbkey=CDS;gene=nudB;product=putative dATP pyrophosphohydrolase;protein_id=CAL12448.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2584644	2585045	.	-	.	ID=id4223;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 63.9%2C E-value 2.2e-16;gbkey=misc_feature;gene=nudB;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	sequence_feature	2584908	2584967	.	-	.	ID=id4224;Note=PS00893 mutT domain signature.;gbkey=misc_feature;gene=nudB;inference=protein motif:Prosite:PS00893
AM286415.1	EMBL	gene	2585205	2587001	.	-	.	ID=gene2350;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;gene_synonym=tls;locus_tag=YE2397
AM286415.1	EMBL	CDS	2585205	2587001	.	-	0	ID=cds2280;Parent=gene2350;Dbxref=EnsemblGenomes-Gn:YE2397,EnsemblGenomes-Tr:CAL12449,GOA:A1JRL1,InterPro:IPR002312,InterPro:IPR004115,InterPro:IPR004364,InterPro:IPR004365,InterPro:IPR004524,InterPro:IPR006195,InterPro:IPR012340,InterPro:IPR018150,InterPro:IPR029351,NCBI_GP:CAL12449.1;Name=CAL12449.1;gbkey=CDS;gene=aspS;product=aspartyl-tRNA synthetase;protein_id=CAL12449.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2585325	2586653	.	-	.	ID=id4225;Note=Pfam match to entry PF00152 tRNA-synt_2%2C tRNA synthetases class II (D%2C K and N)%2C score 75.6%2C E-value 6.8e-20;gbkey=misc_feature;gene=aspS;inference=protein motif:PFAM:PF00152
AM286415.1	EMBL	sequence_feature	2585379	2585408	.	-	.	ID=id4226;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=aspS;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	2585784	2586107	.	-	.	ID=id4227;Note=Pfam match to entry PF02938 GAD%2C GAD domain%2C score 181.9%2C E-value 6.8e-52;gbkey=misc_feature;gene=aspS;inference=protein motif:PFAM:PF02938
AM286415.1	EMBL	sequence_feature	2586303	2586356	.	-	.	ID=id4228;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;gbkey=misc_feature;gene=aspS;inference=protein motif:Prosite:PS00179
AM286415.1	EMBL	sequence_feature	2586696	2586950	.	-	.	ID=id4229;Note=Pfam match to entry PF01336 tRNA_anti%2C OB-fold nucleic acid binding domain%2C score 83.5%2C E-value 2.9e-22;gbkey=misc_feature;gene=aspS;inference=protein motif:PFAM:PF01336
AM286415.1	EMBL	gene	2587549	2588145	.	+	.	ID=gene2351;Name=YE2398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2398
AM286415.1	EMBL	CDS	2587549	2588145	.	+	0	ID=cds2281;Parent=gene2351;Dbxref=EnsemblGenomes-Gn:YE2398,EnsemblGenomes-Tr:CAL12450,GOA:A1JRL4,InterPro:IPR000868,UniProtKB/TrEMBL:A1JRL4,NCBI_GP:CAL12450.1;Name=CAL12450.1;Note=Similar to many proposed isochorismatases including: Salmonella typhimurium%2C and Salmonella typhi putative isochorismatase YecD or Stm1902 or Sty2110 SWALL:Q8XEW8 (EMBL:AE008785) (188 aa) fasta scores: E(): 2.1e-46%2C 66.13 38d in 189 aa and to Escherichia coli%2C and Escherichia coli O157:H7 hypothetical isochorismatase family protein YecD or b1867 or z2920 or ecs2577 SWALL:YECD_ECOLI (SWALL:P37347) (199 aa) fasta scores: E(): 8.2e-46%2C 65.6 38d in 189 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37347;product=putative isochorismatase;protein_id=CAL12450.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2587576	2588130	.	+	.	ID=id4230;Note=Pfam match to entry PF00857 Isochorismatase%2CIsochorismatase family%2C score 203.0%2C E-value 3e-58;gbkey=misc_feature;inference=protein motif:PFAM:PF00857
AM286415.1	EMBL	gene	2588193	2589008	.	+	.	ID=gene2352;Name=YE2399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2399
AM286415.1	EMBL	CDS	2588193	2589008	.	+	0	ID=cds2282;Parent=gene2352;Dbxref=EnsemblGenomes-Gn:YE2399,EnsemblGenomes-Tr:CAL12451,InterPro:IPR002763,UniProtKB/TrEMBL:A1JRL8,NCBI_GP:CAL12451.1;Name=CAL12451.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12451.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2588220	2588954	.	+	.	ID=id4231;Note=Pfam match to entry PF01904 DUF72%2C Protein of unknown function DUF72%2C score -55.2%2C E-value 3.3e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01904
AM286415.1	EMBL	gene	2589200	2589595	.	+	.	ID=gene2353;Name=YE2400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2400
AM286415.1	EMBL	CDS	2589200	2589595	.	+	0	ID=cds2283;Parent=gene2353;Dbxref=EnsemblGenomes-Gn:YE2400,EnsemblGenomes-Tr:CAL12452,InterPro:IPR001129,InterPro:IPR023352,UniProtKB/TrEMBL:A1JRM0,NCBI_GP:CAL12452.1;Name=CAL12452.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12452.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2589212	2589265	.	+	.	ID=id4232;Note=4 probable transmembrane helices predicted for YE2400 by TMHMM2.0 at aa 5-22%2C 43-62%2C 72-89 and 102-124;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2589326	2589385	.	+	.	ID=id4232;Note=4 probable transmembrane helices predicted for YE2400 by TMHMM2.0 at aa 5-22%2C 43-62%2C 72-89 and 102-124;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2589413	2589466	.	+	.	ID=id4232;Note=4 probable transmembrane helices predicted for YE2400 by TMHMM2.0 at aa 5-22%2C 43-62%2C 72-89 and 102-124;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2589503	2589571	.	+	.	ID=id4232;Note=4 probable transmembrane helices predicted for YE2400 by TMHMM2.0 at aa 5-22%2C 43-62%2C 72-89 and 102-124;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2589884	2590585	.	+	.	ID=gene2354;Name=YE2401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2401
AM286415.1	EMBL	CDS	2589884	2590585	.	+	0	ID=cds2284;Parent=gene2354;Dbxref=EnsemblGenomes-Gn:YE2401,EnsemblGenomes-Tr:CAL12453,GOA:A1JRM2,InterPro:IPR005271,InterPro:IPR029063,NCBI_GP:CAL12453.1;Name=CAL12453.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12453.1;transl_table=11
AM286415.1	EMBL	gene	2590582	2591553	.	+	.	ID=gene2355;Name=YE2402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2402
AM286415.1	EMBL	CDS	2590582	2591553	.	+	0	ID=cds2285;Parent=gene2355;Dbxref=EnsemblGenomes-Gn:YE2402,EnsemblGenomes-Tr:CAL12454,GOA:A1JRM4,InterPro:IPR010017,InterPro:IPR027555,InterPro:IPR029063,NCBI_GP:CAL12454.1;Name=CAL12454.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12454.1;transl_table=11
AM286415.1	EMBL	gene	2591613	2592377	.	-	.	ID=gene2356;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=YE2403
AM286415.1	EMBL	CDS	2591613	2592377	.	-	0	ID=cds2286;Parent=gene2356;Dbxref=EnsemblGenomes-Gn:YE2403,EnsemblGenomes-Tr:CAL12455,GOA:A1JRM5,InterPro:IPR005627,InterPro:IPR023648,NCBI_GP:CAL12455.1;Name=CAL12455.1;gbkey=CDS;gene=cutC;product=putative copper homeostasis protein;protein_id=CAL12455.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2591769	2592374	.	-	.	ID=id4233;Note=Pfam match to entry PF03932 CutC%2C CutC family %2Cscore 319.7%2C E-value 2.2e-93;gbkey=misc_feature;gene=cutC;inference=protein motif:PFAM:PF03932
AM286415.1	EMBL	gene	2592619	2593179	.	-	.	ID=gene2357;Name=YE2404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2404
AM286415.1	EMBL	CDS	2592619	2593179	.	-	0	ID=cds2287;Parent=gene2357;Dbxref=EnsemblGenomes-Gn:YE2404,EnsemblGenomes-Tr:CAL12456,InterPro:IPR010393,InterPro:IPR029068,UniProtKB/TrEMBL:A1JRM7,NCBI_GP:CAL12456.1;Name=CAL12456.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12456.1;transl_table=11
AM286415.1	EMBL	gene	2593550	2595280	.	+	.	ID=gene2358;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=YE2406
AM286415.1	EMBL	CDS	2593550	2595280	.	+	0	ID=cds2288;Parent=gene2358;Dbxref=EnsemblGenomes-Gn:YE2406,EnsemblGenomes-Tr:CAL12457,GOA:A1JRM9,InterPro:IPR001278,InterPro:IPR001412,InterPro:IPR005148,InterPro:IPR008909,InterPro:IPR009080,InterPro:IPR014729,NCBI_GP:CAL12457.1;Name=CAL12457.1;gbkey=CDS;gene=argS;product=arginyl-tRNA synthetase;protein_id=CAL12457.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2593562	2593810	.	+	.	ID=id4234;Note=Pfam match to entry PF03485 N-Arg%2C Arginyl tRNA synthetase N terminal domain%2C score 109.8%2C E-value 3.5e-30;gbkey=misc_feature;gene=argS;inference=protein motif:PFAM:PF03485
AM286415.1	EMBL	sequence_feature	2593814	2594887	.	+	.	ID=id4235;Note=Pfam match to entry PF00750 tRNA-synt_1d%2C tRNA synthetases class I (R)%2C score 682.3%2C E-value 1.5e-202;gbkey=misc_feature;gene=argS;inference=protein motif:PFAM:PF00750
AM286415.1	EMBL	sequence_feature	2593913	2593948	.	+	.	ID=id4236;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=argS;inference=protein motif:Prosite:PS00178
AM286415.1	EMBL	gene	2595338	2600218	.	-	.	ID=gene2359;Name=YE2407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2407
AM286415.1	EMBL	CDS	2595338	2600218	.	-	0	ID=cds2289;Parent=gene2359;Dbxref=EnsemblGenomes-Gn:YE2407,EnsemblGenomes-Tr:CAL12458,InterPro:IPR006626,InterPro:IPR008638,InterPro:IPR011050,InterPro:IPR012334,InterPro:IPR025157,UniProtKB/TrEMBL:A1JRN1,NCBI_GP:CAL12458.1;Name=CAL12458.1;gbkey=CDS;product=putative hemolysin;protein_id=CAL12458.1;transl_table=11
AM286415.1	EMBL	gene	2600399	2602066	.	-	.	ID=gene2360;Name=YE2408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2408
AM286415.1	EMBL	CDS	2600399	2602066	.	-	0	ID=cds2290;Parent=gene2360;Dbxref=EnsemblGenomes-Gn:YE2408,EnsemblGenomes-Tr:CAL12459,GOA:A1JRN3,InterPro:IPR005565,InterPro:IPR013686,InterPro:IPR027282,UniProtKB/TrEMBL:A1JRN3,NCBI_GP:CAL12459.1;Name=CAL12459.1;gbkey=CDS;product=putative hemolysin activator protein;protein_id=CAL12459.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2600402	2602057	.	-	.	ID=id4237;Note=Pfam match to entry PF03865 HlyB%2C Hemolysin activator HlyB%2C score 594.5%2C E-value 4.3e-176;gbkey=misc_feature;inference=protein motif:PFAM:PF03865
AM286415.1	EMBL	gene	2602499	2604034	.	-	.	ID=gene2361;Name=mviN;gbkey=Gene;gene=mviN;gene_biotype=protein_coding;locus_tag=YE2409
AM286415.1	EMBL	CDS	2602499	2604034	.	-	0	ID=cds2291;Parent=gene2361;Dbxref=EnsemblGenomes-Gn:YE2409,EnsemblGenomes-Tr:CAL12460,GOA:A1JRN5,InterPro:IPR004268,UniProtKB/TrEMBL:A1JRN5,NCBI_GP:CAL12460.1;Name=CAL12460.1;gbkey=CDS;gene=mviN;product=putative membrane protein;protein_id=CAL12460.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2603900	2603959	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	2603696	2603764	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	2603585	2603653	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	2603498	2603566	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	2603426	2603485	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	2603258	2603326	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	2603147	2603215	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	2603051	2603110	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	2602925	2602993	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	2602829	2602888	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	2602748	2602816	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	2602643	2602711	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	2602532	2602600	.	-	.	ID=id4238;Note=13 probable transmembrane helices predicted for YE2409 by TMHMM2.0 at aa 26-45%2C 91-113%2C 128-150%2C 157-179%2C184-203%2C 237-259%2C 274-296%2C 309-328%2C 348-370%2C 383-402%2C407-429%2C 442-464 and 479-501;gbkey=misc_feature;gene=mviN;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	sequence_feature	2602592	2603953	.	-	.	ID=id4239;Note=Pfam match to entry PF03023 MVIN%2C Virulence factor MVIN%2C score 679.7%2C E-value 9.8e-202;gbkey=misc_feature;gene=mviN;inference=protein motif:PFAM:PF03023
AM286415.1	EMBL	sequence_feature	2603285	2603350	.	-	.	ID=id4240;Note=Predicted helix-turn-helix motif with score 996.000%2C SD 2.58 at aa 229-250%2C sequence VMRQMGPAILGVSVSQISLIIN;gbkey=misc_feature;gene=mviN
AM286415.1	EMBL	pseudogene	2605127	2605765	.	-	.	ID=gene2362;Name=mviM;gbkey=Gene;gene=mviM;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2410;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	2604172	2605092	.	-	.	ID=gene2362;Name=mviM;gbkey=Gene;gene=mviM;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2410;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	2605127	2605765	.	-	0	ID=cds2292;Parent=gene2362;Dbxref=PSEUDO:CAL12461.1;Note=Similar to Salmonella typhimurium virulence factor MviM or Stm1169 SWALL:MVIM_SALTY (SWALL:P37168) (307 aa) fasta scores: E(): 1.9e-70%2C 60.13 38d in 306 aa%2C Yersinia pestis putative oxidoreductase Ypo2042 SWALL:Q8ZEW1 (EMBL:AJ414151) (536 aa) fasta scores: E(): 1.2e-104%2C79.66 38d in 536 aa and to Escherichia coli virulence factor MviM homolog or b1068 SWALL:MVIM_ECOLI (SWALL:P75931) (307 aa) fasta scores: E(): 1.2e-72%2C 61.11 id in 306 aa. Note this CDS has undergone a deletion which has resulted in a frameshift mutation following codon 213.;gbkey=CDS;gene=mviM;inference=similar to sequence:UniProtKB:P75931;product=putative oxidoreductase (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2604172	2605092	.	-	0	ID=cds2292;Parent=gene2362;Dbxref=PSEUDO:CAL12461.1;Note=Similar to Salmonella typhimurium virulence factor MviM or Stm1169 SWALL:MVIM_SALTY (SWALL:P37168) (307 aa) fasta scores: E(): 1.9e-70%2C 60.13 38d in 306 aa%2C Yersinia pestis putative oxidoreductase Ypo2042 SWALL:Q8ZEW1 (EMBL:AJ414151) (536 aa) fasta scores: E(): 1.2e-104%2C79.66 38d in 536 aa and to Escherichia coli virulence factor MviM homolog or b1068 SWALL:MVIM_ECOLI (SWALL:P75931) (307 aa) fasta scores: E(): 1.2e-72%2C 61.11 id in 306 aa. Note this CDS has undergone a deletion which has resulted in a frameshift mutation following codon 213.;gbkey=CDS;gene=mviM;inference=similar to sequence:UniProtKB:P75931;product=putative oxidoreductase (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2604733	2605005	.	-	.	ID=id4241;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2COxidoreductase family%2C NAD-binding Rossmann fold%2C score 36.3%2C E-value 4.6e-08;gbkey=misc_feature;gene=mviM;inference=protein motif:PFAM:PF01408
AM286415.1	EMBL	sequence_feature	2605652	2605684	.	-	.	ID=id4242;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=mviM;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2605773	2606357	.	-	.	ID=gene2363;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=YE2412
AM286415.1	EMBL	CDS	2605773	2606357	.	-	0	ID=cds2293;Parent=gene2363;Dbxref=EnsemblGenomes-Gn:YE2412,EnsemblGenomes-Tr:CAL12462,GOA:A1JRP3,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JRP3,NCBI_GP:CAL12462.1;Name=CAL12462.1;gbkey=CDS;gene=rimJ;product=ribosomal-protein-alanine acetyltransferase;protein_id=CAL12462.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2605872	2606120	.	-	.	ID=id4243;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 47.7%2C E-value 1.6e-11;gbkey=misc_feature;gene=rimJ;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	2606977	2607462	.	+	.	ID=gene2364;Name=YE2414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2414
AM286415.1	EMBL	CDS	2606977	2607462	.	+	0	ID=cds2294;Parent=gene2364;Dbxref=EnsemblGenomes-Gn:YE2414,EnsemblGenomes-Tr:CAL12463,InterPro:IPR025320,UniProtKB/TrEMBL:A1JRP5,NCBI_GP:CAL12463.1;Name=CAL12463.1;Note=no significant database hits;gbkey=CDS;product=putative inner membrane protein;protein_id=CAL12463.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2607310	2607378	.	+	.	ID=id4244;Note=2 probable transmembrane helices predicted for YE2414 by TMHMM2.0 at aa 112-134 and 139-158;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2607391	2607450	.	+	.	ID=id4244;Note=2 probable transmembrane helices predicted for YE2414 by TMHMM2.0 at aa 112-134 and 139-158;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2607472	2607768	.	+	.	ID=gene2365;Name=YE2415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2415
AM286415.1	EMBL	CDS	2607472	2607768	.	+	0	ID=cds2295;Parent=gene2365;Dbxref=EnsemblGenomes-Gn:YE2415,EnsemblGenomes-Tr:CAL12464,InterPro:IPR025320,UniProtKB/TrEMBL:A1JRP6,NCBI_GP:CAL12464.1;Name=CAL12464.1;Note=no significant database hits;gbkey=CDS;product=putative inner membrane protein;protein_id=CAL12464.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2607562	2607630	.	+	.	ID=id4245;Note=1 probable transmembrane helix predicted for YE2415 by TMHMM2.0 at aa 31-53;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2607780	2608097	.	-	.	ID=gene2366;Name=YE2416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2416
AM286415.1	EMBL	CDS	2607780	2608097	.	-	0	ID=cds2296;Parent=gene2366;Dbxref=EnsemblGenomes-Gn:YE2416,EnsemblGenomes-Tr:CAL12465,UniProtKB/TrEMBL:A1JRP9,NCBI_GP:CAL12465.1;Name=CAL12465.1;Note=Similar to Clostridium perfringens hypothetical protein Cpe0255 SWALL:Q8XNS7 (EMBL:AP003186) (104 aa) fasta scores: E(): 9%2C 28.71 38d in 101 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003186;product=putative inner membrane protein;protein_id=CAL12465.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2607906	2607965	.	-	.	ID=id4246;Note=2 probable transmembrane helices predicted for YE2416 by TMHMM2.0 at aa 45-64 and 74-96;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2607810	2607878	.	-	.	ID=id4246;Note=2 probable transmembrane helices predicted for YE2416 by TMHMM2.0 at aa 45-64 and 74-96;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2608774	2609979	.	+	.	ID=gene2367;Name=YE2418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2418
AM286415.1	EMBL	CDS	2608774	2609979	.	+	0	ID=cds2297;Parent=gene2367;Dbxref=EnsemblGenomes-Gn:YE2418,EnsemblGenomes-Tr:CAL12466,GOA:A1JRQ2,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,InterPro:IPR022855,NCBI_GP:CAL12466.1;Name=CAL12466.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12466.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2608810	2608878	.	+	.	ID=id4247;Note=10 probable transmembrane helices predicted for YE2418 by TMHMM2.0 at aa 13-35%2C 99-116%2C 136-158%2C 168-190%2C210-232%2C 247-264%2C 277-296%2C 300-322%2C 335-357 and 367-389;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	2609068	2609121	.	+	.	ID=id4247;Note=10 probable transmembrane helices predicted for YE2418 by TMHMM2.0 at aa 13-35%2C 99-116%2C 136-158%2C 168-190%2C210-232%2C 247-264%2C 277-296%2C 300-322%2C 335-357 and 367-389;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	2609179	2609247	.	+	.	ID=id4247;Note=10 probable transmembrane helices predicted for YE2418 by TMHMM2.0 at aa 13-35%2C 99-116%2C 136-158%2C 168-190%2C210-232%2C 247-264%2C 277-296%2C 300-322%2C 335-357 and 367-389;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	2609275	2609343	.	+	.	ID=id4247;Note=10 probable transmembrane helices predicted for YE2418 by TMHMM2.0 at aa 13-35%2C 99-116%2C 136-158%2C 168-190%2C210-232%2C 247-264%2C 277-296%2C 300-322%2C 335-357 and 367-389;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	2609401	2609469	.	+	.	ID=id4247;Note=10 probable transmembrane helices predicted for YE2418 by TMHMM2.0 at aa 13-35%2C 99-116%2C 136-158%2C 168-190%2C210-232%2C 247-264%2C 277-296%2C 300-322%2C 335-357 and 367-389;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	2609512	2609565	.	+	.	ID=id4247;Note=10 probable transmembrane helices predicted for YE2418 by TMHMM2.0 at aa 13-35%2C 99-116%2C 136-158%2C 168-190%2C210-232%2C 247-264%2C 277-296%2C 300-322%2C 335-357 and 367-389;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	2609602	2609661	.	+	.	ID=id4247;Note=10 probable transmembrane helices predicted for YE2418 by TMHMM2.0 at aa 13-35%2C 99-116%2C 136-158%2C 168-190%2C210-232%2C 247-264%2C 277-296%2C 300-322%2C 335-357 and 367-389;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	2609671	2609739	.	+	.	ID=id4247;Note=10 probable transmembrane helices predicted for YE2418 by TMHMM2.0 at aa 13-35%2C 99-116%2C 136-158%2C 168-190%2C210-232%2C 247-264%2C 277-296%2C 300-322%2C 335-357 and 367-389;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	2609776	2609844	.	+	.	ID=id4247;Note=10 probable transmembrane helices predicted for YE2418 by TMHMM2.0 at aa 13-35%2C 99-116%2C 136-158%2C 168-190%2C210-232%2C 247-264%2C 277-296%2C 300-322%2C 335-357 and 367-389;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	2609872	2609940	.	+	.	ID=id4247;Note=10 probable transmembrane helices predicted for YE2418 by TMHMM2.0 at aa 13-35%2C 99-116%2C 136-158%2C 168-190%2C210-232%2C 247-264%2C 277-296%2C 300-322%2C 335-357 and 367-389;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	2610197	2610760	.	+	.	ID=gene2368;Name=YE2419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2419
AM286415.1	EMBL	CDS	2610197	2610760	.	+	0	ID=cds2298;Parent=gene2368;Dbxref=EnsemblGenomes-Gn:YE2419,EnsemblGenomes-Tr:CAL12467,InterPro:IPR010835,UniProtKB/TrEMBL:A1JRQ6,NCBI_GP:CAL12467.1;Name=CAL12467.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL12467.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2610224	2610256	.	+	.	ID=id4248;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2610798	2611361	.	-	.	ID=gene2369;Name=YE2420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2420
AM286415.1	EMBL	CDS	2610798	2611361	.	-	0	ID=cds2299;Parent=gene2369;Dbxref=EnsemblGenomes-Gn:YE2420,EnsemblGenomes-Tr:CAL12468,InterPro:IPR020945,InterPro:IPR026269,UniProtKB/TrEMBL:A1JRQ8,NCBI_GP:CAL12468.1;Name=CAL12468.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12468.1;transl_table=11
AM286415.1	EMBL	gene	2611424	2612161	.	-	.	ID=gene2370;Name=YE2421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2421
AM286415.1	EMBL	CDS	2611424	2612161	.	-	0	ID=cds2300;Parent=gene2370;Dbxref=EnsemblGenomes-Gn:YE2421,EnsemblGenomes-Tr:CAL12469,GOA:A1JRR0,InterPro:IPR003141,InterPro:IPR004013,InterPro:IPR016195,InterPro:IPR023710,NCBI_GP:CAL12469.1;Name=CAL12469.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12469.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2611556	2611870	.	-	.	ID=id4249;Note=Pfam match to entry PF02811 PHP_C%2C PHP domain C-terminal region%2C score 51.9%2C E-value 9e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF02811
AM286415.1	EMBL	sequence_feature	2611934	2612152	.	-	.	ID=id4250;Note=Pfam match to entry PF02231 PHP_N%2C PHP domain N-terminal region%2C score 71.2%2C E-value 1.4e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF02231
AM286415.1	EMBL	gene	2612310	2613251	.	-	.	ID=gene2371;Name=YE2422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2422
AM286415.1	EMBL	CDS	2612310	2613251	.	-	0	ID=cds2301;Parent=gene2371;Dbxref=EnsemblGenomes-Gn:YE2422,EnsemblGenomes-Tr:CAL12470,GOA:A1JRR3,InterPro:IPR006140,InterPro:IPR016040,InterPro:IPR023514,NCBI_GP:CAL12470.1;Name=CAL12470.1;Note=Similar to Salmonella typhi putative 2-hydroxyacid dehydrogenase in Sty1172 SWALL:Q8Z7M6 (EMBL:AL627269) (312 aa) fasta scores: E(): 2.4e-66%2C 55.73 38d in 314 aa and to Escherichia coli putative 2-hydroxyacid dehydrogenase YcdW or b1033 SWALL:YCDW_ECOLI (SWALL:P75913) (325 aa) fasta scores: E(): 7.9e-66%2C 54.95 38d in 313 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75913;product=putative oxidoreductase;protein_id=CAL12470.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2612424	2612948	.	-	.	ID=id4251;Note=Pfam match to entry PF02826 2-Hacid_DH_C%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain %2Cscore 31.2%2C E-value 2e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF02826
AM286415.1	EMBL	sequence_feature	2612799	2612822	.	-	.	ID=id4252;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2613470	2613559	.	+	.	ID=gene2372;Name=tRNA-Ser (GGA);gbkey=Gene;gene=tRNA-Ser (GGA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2613470	2613559	.	+	.	ID=rna96;Parent=gene2372;gbkey=tRNA;gene=tRNA-Ser (GGA);product=tRNA-Ser
AM286415.1	EMBL	exon	2613470	2613559	.	+	.	ID=id4253;Parent=rna96;gbkey=tRNA;gene=tRNA-Ser (GGA);product=tRNA-Ser
AM286415.1	EMBL	gene	2613769	2614653	.	+	.	ID=gene2373;Name=YE2423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2423
AM286415.1	EMBL	CDS	2613769	2614653	.	+	0	ID=cds2302;Parent=gene2373;Dbxref=EnsemblGenomes-Gn:YE2423,EnsemblGenomes-Tr:CAL12471,GOA:A1JRR7,InterPro:IPR004129,InterPro:IPR017946,UniProtKB/TrEMBL:A1JRR7,NCBI_GP:CAL12471.1;Name=CAL12471.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12471.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2613844	2614641	.	+	.	ID=id4254;Note=Pfam match to entry PF03009 GDPD%2C Glycerophosphoryl diester phosphodiesterase family%2C score 52.2%2C E-value 7.5e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF03009
AM286415.1	EMBL	gene	2614794	2614883	.	+	.	ID=gene2374;Name=tRNA-Ser (GGA);gbkey=Gene;gene=tRNA-Ser (GGA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2614794	2614883	.	+	.	ID=rna97;Parent=gene2374;gbkey=tRNA;gene=tRNA-Ser (GGA);product=tRNA-Ser
AM286415.1	EMBL	exon	2614794	2614883	.	+	.	ID=id4255;Parent=rna97;gbkey=tRNA;gene=tRNA-Ser (GGA);product=tRNA-Ser
AM286415.1	EMBL	gene	2614957	2616072	.	-	.	ID=gene2375;Name=YE2425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2425
AM286415.1	EMBL	CDS	2614957	2616072	.	-	0	ID=cds2303;Parent=gene2375;Dbxref=EnsemblGenomes-Gn:YE2425,EnsemblGenomes-Tr:CAL12472,GOA:A1JRR8,InterPro:IPR000160,InterPro:IPR011620,InterPro:IPR029787,UniProtKB/TrEMBL:A1JRR8,NCBI_GP:CAL12472.1;Name=CAL12472.1;Note=Similar to many proteins of undefined function including: Listeria monocytogenes hypothetical protein Lmo2174 SWALL:Q8Y595 (EMBL:AL591982) (357 aa) fasta scores: E(): 2e-17%2C 31.59 38d in 345 aa and to Aquifex aeolicus hypothetical protein Aq_035 SWALL:O66451 (EMBL:AE000670) (431 aa) fasta scores: E(): 1.1e-16%2C30.85 38d in 269 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591982;product=putative inner membrane protein;protein_id=CAL12472.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2615032	2615505	.	-	.	ID=id4256;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 162.5%2C E-value 4.6e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	2615902	2615955	.	-	.	ID=id4257;Note=5 probable transmembrane helices predicted for YE2425 by TMHMM2.0 at aa 40-57%2C 64-86%2C 101-123%2C 128-150 and 155-177;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2615815	2615883	.	-	.	ID=id4257;Note=5 probable transmembrane helices predicted for YE2425 by TMHMM2.0 at aa 40-57%2C 64-86%2C 101-123%2C 128-150 and 155-177;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2615704	2615772	.	-	.	ID=id4257;Note=5 probable transmembrane helices predicted for YE2425 by TMHMM2.0 at aa 40-57%2C 64-86%2C 101-123%2C 128-150 and 155-177;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2615623	2615691	.	-	.	ID=id4257;Note=5 probable transmembrane helices predicted for YE2425 by TMHMM2.0 at aa 40-57%2C 64-86%2C 101-123%2C 128-150 and 155-177;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2615542	2615610	.	-	.	ID=id4257;Note=5 probable transmembrane helices predicted for YE2425 by TMHMM2.0 at aa 40-57%2C 64-86%2C 101-123%2C 128-150 and 155-177;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	2616627	2618324	.	+	.	ID=gene2376;Name=YE2426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2426
AM286415.1	EMBL	CDS	2616627	2618324	.	+	0	ID=cds2304;Parent=gene2376;Dbxref=EnsemblGenomes-Gn:YE2426,EnsemblGenomes-Tr:CAL12473,GOA:A1JRS3,InterPro:IPR001902,InterPro:IPR002645,InterPro:IPR011547,InterPro:IPR018045,UniProtKB/TrEMBL:A1JRS3,NCBI_GP:CAL12473.1;Name=CAL12473.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12473.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2616723	2616791	.	+	.	ID=id4258;Note=8 probable transmembrane helices predicted for YE2426 by TMHMM2.0 at aa 33-55%2C 100-122%2C 127-149%2C 177-199%2C281-303%2C 318-340%2C 360-391 and 411-442;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	2616924	2616992	.	+	.	ID=id4258;Note=8 probable transmembrane helices predicted for YE2426 by TMHMM2.0 at aa 33-55%2C 100-122%2C 127-149%2C 177-199%2C281-303%2C 318-340%2C 360-391 and 411-442;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	2617005	2617073	.	+	.	ID=id4258;Note=8 probable transmembrane helices predicted for YE2426 by TMHMM2.0 at aa 33-55%2C 100-122%2C 127-149%2C 177-199%2C281-303%2C 318-340%2C 360-391 and 411-442;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	2617155	2617223	.	+	.	ID=id4258;Note=8 probable transmembrane helices predicted for YE2426 by TMHMM2.0 at aa 33-55%2C 100-122%2C 127-149%2C 177-199%2C281-303%2C 318-340%2C 360-391 and 411-442;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	2617467	2617535	.	+	.	ID=id4258;Note=8 probable transmembrane helices predicted for YE2426 by TMHMM2.0 at aa 33-55%2C 100-122%2C 127-149%2C 177-199%2C281-303%2C 318-340%2C 360-391 and 411-442;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	2617578	2617646	.	+	.	ID=id4258;Note=8 probable transmembrane helices predicted for YE2426 by TMHMM2.0 at aa 33-55%2C 100-122%2C 127-149%2C 177-199%2C281-303%2C 318-340%2C 360-391 and 411-442;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	2617704	2617799	.	+	.	ID=id4258;Note=8 probable transmembrane helices predicted for YE2426 by TMHMM2.0 at aa 33-55%2C 100-122%2C 127-149%2C 177-199%2C281-303%2C 318-340%2C 360-391 and 411-442;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	2617857	2617952	.	+	.	ID=id4258;Note=8 probable transmembrane helices predicted for YE2426 by TMHMM2.0 at aa 33-55%2C 100-122%2C 127-149%2C 177-199%2C281-303%2C 318-340%2C 360-391 and 411-442;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	2616798	2616863	.	+	.	ID=id4259;Note=PS01130 Sulfate transporters signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01130
AM286415.1	EMBL	sequence_feature	2616981	2617961	.	+	.	ID=id4260;Note=Pfam match to entry PF00916 Sulfate_transp%2C Sulfate transporter family%2C score 307.8%2C E-value 8.6e-90;gbkey=misc_feature;inference=protein motif:PFAM:PF00916
AM286415.1	EMBL	sequence_feature	2617983	2618300	.	+	.	ID=id4261;Note=Pfam match to entry PF01740 STAS%2C STAS domain %2Cscore 43.3%2C E-value 3.6e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF01740
AM286415.1	EMBL	gene	2618400	2619254	.	-	.	ID=gene2377;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=YE2427
AM286415.1	EMBL	CDS	2618400	2619254	.	-	0	ID=cds2305;Parent=gene2377;Dbxref=EnsemblGenomes-Gn:YE2427,EnsemblGenomes-Tr:CAL12474,GOA:A1JRS8,InterPro:IPR006218,InterPro:IPR006269,InterPro:IPR013785,NCBI_GP:CAL12474.1;Name=CAL12474.1;gbkey=CDS;gene=kdsA;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=CAL12474.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2618412	2619254	.	-	.	ID=id4262;Note=Pfam match to entry PF00793 DAHP_synth_1%2C DAHP synthetase I family%2C score 411.7%2C E-value 4.4e-121;gbkey=misc_feature;gene=kdsA;inference=protein motif:PFAM:PF00793
AM286415.1	EMBL	gene	2619395	2620204	.	-	.	ID=gene2378;Name=YE2428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2428
AM286415.1	EMBL	CDS	2619395	2620204	.	-	0	ID=cds2306;Parent=gene2378;Dbxref=EnsemblGenomes-Gn:YE2428,EnsemblGenomes-Tr:CAL12475,InterPro:IPR011990,UniProtKB/TrEMBL:A1JRT0,NCBI_GP:CAL12475.1;Name=CAL12475.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12475.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2619521	2619544	.	-	.	ID=id4263;Note=PS00030 Eukaryotic putative RNA-binding region RNP-1 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00030
AM286415.1	EMBL	gene	2620201	2620602	.	-	.	ID=gene2379;Name=YE2429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2429
AM286415.1	EMBL	CDS	2620201	2620602	.	-	0	ID=cds2307;Parent=gene2379;Dbxref=EnsemblGenomes-Gn:YE2429,EnsemblGenomes-Tr:CAL12476,InterPro:IPR007360,UniProtKB/TrEMBL:A1JRT3,NCBI_GP:CAL12476.1;Name=CAL12476.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12476.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2620516	2620575	.	-	.	ID=id4264;Note=4 probable transmembrane helices predicted for YE2429 by TMHMM2.0 at aa 10-29%2C 50-69%2C 73-95 and 108-130;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2620396	2620455	.	-	.	ID=id4264;Note=4 probable transmembrane helices predicted for YE2429 by TMHMM2.0 at aa 10-29%2C 50-69%2C 73-95 and 108-130;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2620318	2620386	.	-	.	ID=id4264;Note=4 probable transmembrane helices predicted for YE2429 by TMHMM2.0 at aa 10-29%2C 50-69%2C 73-95 and 108-130;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2620213	2620281	.	-	.	ID=id4264;Note=4 probable transmembrane helices predicted for YE2429 by TMHMM2.0 at aa 10-29%2C 50-69%2C 73-95 and 108-130;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2620620	2621474	.	-	.	ID=gene2380;Name=YE2430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2430
AM286415.1	EMBL	CDS	2620620	2621474	.	-	0	ID=cds2308;Parent=gene2380;Dbxref=EnsemblGenomes-Gn:YE2430,EnsemblGenomes-Tr:CAL12477,GOA:A1JRT6,InterPro:IPR002052,InterPro:IPR004556,InterPro:IPR019874,InterPro:IPR025714,InterPro:IPR029063,UniProtKB/TrEMBL:A1JRT6,NCBI_GP:CAL12477.1;Name=CAL12477.1;gbkey=CDS;product=putative protoporphyrinogen oxidase;protein_id=CAL12477.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2620920	2620940	.	-	.	ID=id4265;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	2621474	2622556	.	-	.	ID=gene2381;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;gene_synonym=sueB,uar;locus_tag=YE2431
AM286415.1	EMBL	CDS	2621474	2622556	.	-	0	ID=cds2309;Parent=gene2381;Dbxref=EnsemblGenomes-Gn:YE2431,EnsemblGenomes-Tr:CAL12478,GOA:A1JRU0,InterPro:IPR000352,InterPro:IPR004373,InterPro:IPR005139,InterPro:IPR014720,NCBI_GP:CAL12478.1;Name=CAL12478.1;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=CAL12478.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2621594	2621935	.	-	.	ID=id4266;Note=Pfam match to entry PF00472 RF-1%2C Peptidyl-tRNA hydrolase domain%2C score 248.5%2C E-value 6.2e-72;gbkey=misc_feature;gene=prfA;inference=protein motif:PFAM:PF00472
AM286415.1	EMBL	sequence_feature	2621825	2621875	.	-	.	ID=id4267;Note=PS00745 Prokaryotic-type class I peptide chain release factors signature.;gbkey=misc_feature;gene=prfA;inference=protein motif:Prosite:PS00745
AM286415.1	EMBL	sequence_feature	2622023	2622370	.	-	.	ID=id4268;Note=Pfam match to entry PF03462 PCRF%2C PCRF domain %2Cscore 250.2%2C E-value 1.9e-72;gbkey=misc_feature;gene=prfA;inference=protein motif:PFAM:PF03462
AM286415.1	EMBL	gene	2622588	2623850	.	-	.	ID=gene2382;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=YE2432
AM286415.1	EMBL	CDS	2622588	2623850	.	-	0	ID=cds2310;Parent=gene2382;Dbxref=EnsemblGenomes-Gn:YE2432,EnsemblGenomes-Tr:CAL12479,GOA:A1JRU4,InterPro:IPR000343,InterPro:IPR006151,InterPro:IPR015895,InterPro:IPR015896,InterPro:IPR016040,InterPro:IPR018214,NCBI_GP:CAL12479.1;Name=CAL12479.1;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=CAL12479.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2622597	2623850	.	-	.	ID=id4269;Note=Pfam match to entry PF00745 GlutR%2C Glutamyl-tRNAGlu reductase%2C score 789.1%2C E-value 1.1e-234;gbkey=misc_feature;gene=hemA;inference=protein motif:PFAM:PF00745
AM286415.1	EMBL	sequence_feature	2623341	2623373	.	-	.	ID=id4270;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hemA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2623485	2623556	.	-	.	ID=id4271;Note=PS00747 Glutamyl-tRNA reductase signature.;gbkey=misc_feature;gene=hemA;inference=protein motif:Prosite:PS00747
AM286415.1	EMBL	gene	2624155	2624778	.	+	.	ID=gene2383;Name=YE2433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2433
AM286415.1	EMBL	CDS	2624155	2624778	.	+	0	ID=cds2311;Parent=gene2383;Dbxref=EnsemblGenomes-Gn:YE2433,EnsemblGenomes-Tr:CAL12480,GOA:A1JRU9,InterPro:IPR004565,InterPro:IPR029046,NCBI_GP:CAL12480.1;Name=CAL12480.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL12480.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2624173	2624736	.	+	.	ID=id4272;Note=Pfam match to entry PF03550 LolB%2C Outer membrane lipoprotein LolB%2C score 253.5%2C E-value 1.9e-73;gbkey=misc_feature;inference=protein motif:PFAM:PF03550
AM286415.1	EMBL	sequence_feature	2624188	2624220	.	+	.	ID=id4273;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2624822	2625661	.	+	.	ID=gene2384;Name=ipk;gbkey=Gene;gene=ipk;gene_biotype=protein_coding;locus_tag=YE2434
AM286415.1	EMBL	CDS	2624822	2625661	.	+	0	ID=cds2312;Parent=gene2384;Dbxref=EnsemblGenomes-Gn:YE2434,EnsemblGenomes-Tr:CAL12481,GOA:A1JRV1,InterPro:IPR004424,InterPro:IPR006204,InterPro:IPR013750,InterPro:IPR014721,InterPro:IPR020568,UniProtKB/TrEMBL:A1JRV1,NCBI_GP:CAL12481.1;Name=CAL12481.1;gbkey=CDS;gene=ipk;product=putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=CAL12481.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2624825	2625625	.	+	.	ID=id4274;Note=Pfam match to entry PF00288 GHMP_kinases%2C GHMP kinases putative ATP-binding protein%2C score 96.8%2C E-value 2.9e-26;gbkey=misc_feature;gene=ipk;inference=protein motif:PFAM:PF00288
AM286415.1	EMBL	gene	2625859	2626806	.	+	.	ID=gene2385;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;gene_synonym=prs;locus_tag=YE2435
AM286415.1	EMBL	CDS	2625859	2626806	.	+	0	ID=cds2313;Parent=gene2385;Dbxref=EnsemblGenomes-Gn:YE2435,EnsemblGenomes-Tr:CAL12482,GOA:A1JRV4,InterPro:IPR000842,InterPro:IPR005946,InterPro:IPR029057,InterPro:IPR029099,UniProtKB/TrEMBL:A1JRV4,NCBI_GP:CAL12482.1;Name=CAL12482.1;gbkey=CDS;gene=prsA;product=ribose-phosphate pyrophosphokinase;protein_id=CAL12482.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2626213	2626242	.	+	.	ID=id4275;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=prsA;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	2626243	2626290	.	+	.	ID=id4276;Note=PS00114 Phosphoribosyl pyrophosphate synthetase signature.;gbkey=misc_feature;gene=prsA;inference=protein motif:Prosite:PS00114
AM286415.1	EMBL	sequence_feature	2626264	2626677	.	+	.	ID=id4277;Note=Pfam match to entry PF00156 Pribosyltran%2CPhosphoribosyl transferase domain%2C score 128.7%2C E-value 7e-36;gbkey=misc_feature;gene=prsA;inference=protein motif:PFAM:PF00156
AM286415.1	EMBL	sequence_feature	2626504	2626542	.	+	.	ID=id4278;Note=PS00103 Purine/pyrimidine phosphoribosyl transferases signature.;gbkey=misc_feature;gene=prsA;inference=protein motif:Prosite:PS00103
AM286415.1	EMBL	gene	2627161	2627433	.	-	.	ID=gene2386;Name=YE2436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2436
AM286415.1	EMBL	CDS	2627161	2627433	.	-	0	ID=cds2314;Parent=gene2386;Dbxref=EnsemblGenomes-Gn:YE2436,EnsemblGenomes-Tr:CAL12483,InterPro:IPR019698,UniProtKB/TrEMBL:A1JRV8,NCBI_GP:CAL12483.1;Name=CAL12483.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12483.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2627341	2627409	.	-	.	ID=id4279;Note=2 probable transmembrane helices predicted for YE2436 by TMHMM2.0 at aa 9-31 and 41-63;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2627245	2627313	.	-	.	ID=id4279;Note=2 probable transmembrane helices predicted for YE2436 by TMHMM2.0 at aa 9-31 and 41-63;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2627765	2628358	.	+	.	ID=gene2387;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=YE2437
AM286415.1	EMBL	CDS	2627765	2628358	.	+	0	ID=cds2315;Parent=gene2387;Dbxref=EnsemblGenomes-Gn:YE2437,EnsemblGenomes-Tr:CAL12484,GOA:A1JRW1,InterPro:IPR001328,InterPro:IPR018171,NCBI_GP:CAL12484.1;Name=CAL12484.1;gbkey=CDS;gene=pth;product=peptidyl-tRNA hydrolase;protein_id=CAL12484.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2627771	2628334	.	+	.	ID=id4280;Note=Pfam match to entry PF01195 Pept_tRNA_hydro%2CPeptidyl-tRNA hydrolase%2C score 342.3%2C E-value 3.4e-100;gbkey=misc_feature;gene=pth;inference=protein motif:PFAM:PF01195
AM286415.1	EMBL	sequence_feature	2628095	2628127	.	+	.	ID=id4281;Note=PS01196 Peptidyl-tRNA hydrolase signature 2.;gbkey=misc_feature;gene=pth;inference=protein motif:Prosite:PS01196
AM286415.1	EMBL	gene	2628413	2628871	.	-	.	ID=gene2388;Name=YE2438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2438
AM286415.1	EMBL	CDS	2628413	2628871	.	-	0	ID=cds2316;Parent=gene2388;Dbxref=EnsemblGenomes-Gn:YE2438,EnsemblGenomes-Tr:CAL12485,UniProtKB/TrEMBL:A1JRW2,NCBI_GP:CAL12485.1;Name=CAL12485.1;Note=no significant database hits;gbkey=CDS;product=putative exported protein;protein_id=CAL12485.1;transl_table=11
AM286415.1	EMBL	gene	2629139	2630230	.	+	.	ID=gene2389;Name=YE2439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2439
AM286415.1	EMBL	CDS	2629139	2630230	.	+	0	ID=cds2317;Parent=gene2389;Dbxref=EnsemblGenomes-Gn:YE2439,EnsemblGenomes-Tr:CAL12486,GOA:A1JRW5,InterPro:IPR004396,InterPro:IPR006073,InterPro:IPR012675,InterPro:IPR012676,InterPro:IPR013029,InterPro:IPR023192,InterPro:IPR027417,UniProtKB/TrEMBL:A1JRW5,NCBI_GP:CAL12486.1;Name=CAL12486.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12486.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2629139	2629165	.	+	.	ID=id4282;Note=PS00443 Glutamine amidotransferases class-II active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00443
AM286415.1	EMBL	sequence_feature	2629154	2629282	.	+	.	ID=id4283;Note=Pfam match to entry PF01018 GTP1_OBG%2C GTP1/OBG family%2C score 12.0%2C E-value 0.0019;gbkey=misc_feature;inference=protein motif:PFAM:PF01018
AM286415.1	EMBL	sequence_feature	2629163	2629186	.	+	.	ID=id4284;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2630376	2631542	.	-	.	ID=gene2390;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=YE2440
AM286415.1	EMBL	CDS	2630376	2631542	.	-	0	ID=cds2318;Parent=gene2390;Dbxref=EnsemblGenomes-Gn:YE2440,EnsemblGenomes-Tr:CAL12487,GOA:A1JRW9,InterPro:IPR001466,InterPro:IPR001586,InterPro:IPR012338,UniProtKB/TrEMBL:A1JRW9,NCBI_GP:CAL12487.1;Name=CAL12487.1;Note=Previously sequenced: Yersinia enterocolitica beta-lactamase precursor AmpC SWALL:AMPC_YEREN (SWALL:P45460) (388 aa) fasta scores: E(): 1.5e-150%2C97.93 38d in 388 aa%2C and to Citrobacter freundii beta-lactamase precursor blaC SWALL:Q59276 (EMBL:D13207) (381 aa) fasta scores: E(): 8.1e-87%2C 56.95 38d in 388 aa;gbkey=CDS;gene=ampC;inference=similar to sequence:UniProtKB:P45460;product=beta-lactamase;protein_id=CAL12487.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2630379	2631398	.	-	.	ID=id4285;Note=Pfam match to entry PF00144 beta-lactamase%2CBeta-lactamase%2C score 434.5%2C E-value 6.2e-128;gbkey=misc_feature;gene=ampC;inference=protein motif:PFAM:PF00144
AM286415.1	EMBL	sequence_feature	2631267	2631290	.	-	.	ID=id4286;Note=PS00336 Beta-lactamase class-C active site.;gbkey=misc_feature;gene=ampC;inference=protein motif:Prosite:PS00336
AM286415.1	EMBL	sequence_feature	2631471	2631530	.	-	.	ID=id4287;Note=1 probable transmembrane helix predicted for YE2440 by TMHMM2.0 at aa 34-53;gbkey=misc_feature;gene=ampC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2631677	2632561	.	+	.	ID=gene2391;Name=ampR;gbkey=Gene;gene=ampR;gene_biotype=protein_coding;locus_tag=YE2441
AM286415.1	EMBL	CDS	2631677	2632561	.	+	0	ID=cds2319;Parent=gene2391;Dbxref=EnsemblGenomes-Gn:YE2441,EnsemblGenomes-Tr:CAL12488,GOA:A1JRX2,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JRX2,NCBI_GP:CAL12488.1;Name=CAL12488.1;Note=Previously sequenced: Yersinia enterocolitica transcriptional activator protein AmpR SWALL:AMPR_YEREN (SWALL:P45461) (294 aa) fasta scores: E(): 5.2e-104%2C91.55 38d in 296 aa.Also highly similar to Enterobacter cloacae AmpR protein SWALL:O83025 (EMBL:AB016612) (291 aa) fasta scores: E(): 1.2e-83%2C 70.69 38d in 290 aa;gbkey=CDS;gene=ampR;inference=similar to sequence:UniProtKB:P45461;product=transcriptional activator protein;protein_id=CAL12488.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2631698	2631877	.	+	.	ID=id4288;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 100.3%2C E-value 2.5e-27;gbkey=misc_feature;gene=ampR;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2631737	2631802	.	+	.	ID=id4289;Note=Predicted helix-turn-helix motif with score 1879.000%2C SD 5.59 at aa 21-42%2C sequence LSFTKAAIELNVTHAAISQQVK;gbkey=misc_feature;gene=ampR
AM286415.1	EMBL	sequence_feature	2631740	2631832	.	+	.	ID=id4290;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=ampR;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	2631941	2632546	.	+	.	ID=id4291;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 141.1%2C E-value 1.2e-39;gbkey=misc_feature;gene=ampR;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	2632668	2633324	.	-	.	ID=gene2392;Name=YE2442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2442
AM286415.1	EMBL	CDS	2632668	2633324	.	-	0	ID=cds2320;Parent=gene2392;Dbxref=EnsemblGenomes-Gn:YE2442,EnsemblGenomes-Tr:CAL12489,InterPro:IPR007486,InterPro:IPR029024,UniProtKB/TrEMBL:A1JRX6,NCBI_GP:CAL12489.1;Name=CAL12489.1;Note=Similar to Escherichia coli hypothetical protein YebE or b1846 SWALL:YEBE_ECOLI (SWALL:P33218) (219 aa) fasta scores: E(): 2.6e-55%2C 67.58 38d in 219 aa%2CSalmonella typhimurium putative inner membrane protein YebE or Stm1880 SWALL:Q8ZNW8 (EMBL:AE008783) (219 aa) fasta scores: E(): 1.4e-54%2C 67.28 38d in 217 aa. Previously partially sequenced as: Yersinia enterocolitica hypothetical protein in ampR 5'region SWALL:YEBE_YEREN (SWALL:P45462) (139 aa) fasta scores: E(): 2.3e-46%2C 95.68 id in 139 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45462;product=putative inner membrane protein;protein_id=CAL12489.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2633193	2633261	.	-	.	ID=id4292;Note=2 probable transmembrane helices predicted for YE2442 by TMHMM2.0 at aa 37-59 and 66-88;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2633106	2633174	.	-	.	ID=id4292;Note=2 probable transmembrane helices predicted for YE2442 by TMHMM2.0 at aa 37-59 and 66-88;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2633539	2633874	.	-	.	ID=gene2393;Name=YE2443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2443
AM286415.1	EMBL	CDS	2633539	2633874	.	-	0	ID=cds2321;Parent=gene2393;Dbxref=EnsemblGenomes-Gn:YE2443,EnsemblGenomes-Tr:CAL12490,UniProtKB/TrEMBL:A1JRY0,NCBI_GP:CAL12490.1;Name=CAL12490.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12490.1;transl_table=11
AM286415.1	EMBL	gene	2634101	2634670	.	+	.	ID=gene2394;Name=YE2444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2444
AM286415.1	EMBL	CDS	2634101	2634670	.	+	0	ID=cds2322;Parent=gene2394;Dbxref=EnsemblGenomes-Gn:YE2444,EnsemblGenomes-Tr:CAL12491,UniProtKB/TrEMBL:A1JRY1,NCBI_GP:CAL12491.1;Name=CAL12491.1;Note=no significant database hits;gbkey=CDS;product=putative exported protein;protein_id=CAL12491.1;transl_table=11
AM286415.1	EMBL	gene	2635671	2635907	.	-	.	ID=gene2395;Name=YE2445;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2445;part=1/3
AM286415.1	EMBL	gene	2635263	2635667	.	-	.	ID=gene2395;Name=YE2445;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2445;part=2/3
AM286415.1	EMBL	gene	2634688	2635260	.	-	.	ID=gene2395;Name=YE2445;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2445;part=3/3
AM286415.1	EMBL	CDS	2635671	2635907	.	-	0	ID=cds2323;Parent=gene2395;Dbxref=EnsemblGenomes-Gn:YE2445,EnsemblGenomes-Tr:CAL12492,NCBI_GP:CAL12492.1;Name=CAL12492.1;Note=Similar to many transposases including: Escherichia coli SWALL:Q9L909 (EMBL:AF188737) (406 aa) fasta scores: E(): 1.5e-140%2C 85.46 38d in 406 aa and Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 1.5e-22%2C 26.97 38d in 393 aa. Note this CDS carries multiple frame shift mutations.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q06126;product=transposase (pseudogene);protein_id=CAL12492.1;transl_table=11
AM286415.1	EMBL	CDS	2635263	2635667	.	-	0	ID=cds2323;Parent=gene2395;Dbxref=EnsemblGenomes-Gn:YE2445,EnsemblGenomes-Tr:CAL12492,NCBI_GP:CAL12492.1;Name=CAL12492.1;Note=Similar to many transposases including: Escherichia coli SWALL:Q9L909 (EMBL:AF188737) (406 aa) fasta scores: E(): 1.5e-140%2C 85.46 38d in 406 aa and Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 1.5e-22%2C 26.97 38d in 393 aa. Note this CDS carries multiple frame shift mutations.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q06126;product=transposase (pseudogene);protein_id=CAL12492.1;transl_table=11
AM286415.1	EMBL	CDS	2634688	2635260	.	-	0	ID=cds2323;Parent=gene2395;Dbxref=EnsemblGenomes-Gn:YE2445,EnsemblGenomes-Tr:CAL12492,NCBI_GP:CAL12492.1;Name=CAL12492.1;Note=Similar to many transposases including: Escherichia coli SWALL:Q9L909 (EMBL:AF188737) (406 aa) fasta scores: E(): 1.5e-140%2C 85.46 38d in 406 aa and Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 1.5e-22%2C 26.97 38d in 393 aa. Note this CDS carries multiple frame shift mutations.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q06126;product=transposase (pseudogene);protein_id=CAL12492.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2635263	2635664	.	-	.	ID=id4293;Note=Pfam match to entry PF01610 Transposase_12%2CTransposase%2C score 21.7%2C E-value 2.2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01610
AM286415.1	EMBL	sequence_feature	2635671	2635811	.	-	.	ID=id4294;Note=Pfam match to entry PF01610 Transposase_12%2CTransposase%2C score 21.0%2C E-value 3.4e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01610
AM286415.1	EMBL	gene	2635919	2636509	.	-	.	ID=gene2396;Name=YE2447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2447
AM286415.1	EMBL	CDS	2635919	2636509	.	-	0	ID=cds2324;Parent=gene2396;Dbxref=EnsemblGenomes-Gn:YE2447,EnsemblGenomes-Tr:CAL12493,GOA:A1JRY5,InterPro:IPR011009,UniProtKB/TrEMBL:A1JRY5,NCBI_GP:CAL12493.1;Name=CAL12493.1;Note=Highly similar to Shigella flexneri%2C and Shigella flexneri 2a OspG%2C secreted by the Mxi-Spa type III secretion machinery%2C function unknown ospg or s0237 SWALL:Q99PZ6 (EMBL:AL391753) (196 aa) fasta scores: E(): 1e-67%2C 91.32 38d in 196 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL391753;product=putative type III secreted effector protein;protein_id=CAL12493.1;transl_table=11
AM286415.1	EMBL	gene	2636942	2637751	.	-	.	ID=gene2397;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=YE2448
AM286415.1	EMBL	CDS	2636942	2637751	.	-	0	ID=cds2325;Parent=gene2397;Dbxref=EnsemblGenomes-Gn:YE2448,EnsemblGenomes-Tr:CAL12494,GOA:A1JRY8,InterPro:IPR001034,InterPro:IPR011991,InterPro:IPR014036,InterPro:IPR018356,UniProtKB/TrEMBL:A1JRY8,NCBI_GP:CAL12494.1;Name=CAL12494.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 putative N-acetyl galactosamine utilization operon transcriptional repressor AgaR or b3131 or z4483 or ecs4009 SWALL:AGAR_ECOLI (SWALL:P42902) (269 aa) fasta scores: E(): 2e-84%2C 85.13 38d in 269 aa and to Yersinia pestis deor-family regulatory protein Ypo0831 SWALL:Q8ZHQ9 (EMBL:AJ414145) (258 aa) fasta scores: E(): 7.4e-37%2C 48 id in 250 aa;gbkey=CDS;gene=agaR;inference=similar to sequence:UniProtKB:P42902;product=DeoR-family regulatory protein;protein_id=CAL12494.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2637014	2637700	.	-	.	ID=id4295;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 375.5%2C E-value 3.6e-110;gbkey=misc_feature;gene=agaR;inference=protein motif:PFAM:PF00455
AM286415.1	EMBL	sequence_feature	2637389	2637424	.	-	.	ID=id4296;Note=PS00141 Eukaryotic and viral aspartyl proteases active site.;gbkey=misc_feature;gene=agaR;inference=protein motif:Prosite:PS00141
AM286415.1	EMBL	sequence_feature	2637596	2637700	.	-	.	ID=id4297;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;gbkey=misc_feature;gene=agaR;inference=protein motif:Prosite:PS00894
AM286415.1	EMBL	pseudogene	2638092	2638526	.	+	.	ID=gene2398;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=pseudogene;locus_tag=YE2449;pseudo=true
AM286415.1	EMBL	CDS	2638092	2638526	.	+	0	ID=cds2326;Parent=gene2398;Note=Similar to Escherichia coli putative tagatose-6-phosphate ketose/aldose isomerase AgaS or b3136 SWALL:AGAS_ECOLI (SWALL:P42907) (384 aa) fasta scores: E(): 7.5e-45%2C 79.02 38d in 143 aa%2C and to Yersinia pestis putative phosphosugar isomerase Ypo0833 SWALL:Q8ZHQ7 (EMBL:AJ414145) (388 aa) fasta scores: E(): 8e-27%2C 53.14 id in 143 aa. This CDS has undergone a large deletion event removing the 5'end of the coding sequence;gbkey=CDS;gene=agaS;inference=similar to sequence:UniProtKB:P42907;product=putative tagatose-6-phosphate ketose/aldose isomerase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2638092	2638451	.	+	.	ID=id4298;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 46.7%2C E-value 3.4e-11;gbkey=misc_feature;gene=agaS;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	pseudogene	2638539	2638949	.	+	.	ID=gene2399;Name=agaY;gbkey=Gene;gene=agaY;gene_biotype=pseudogene;locus_tag=YE2450;pseudo=true
AM286415.1	EMBL	CDS	2638539	2638949	.	+	0	ID=cds2327;Parent=gene2399;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 tagatose-bisphosphate aldolase AgaY or Kba or b3137 or z4491 or ecs4017 SWALL:AGAY_ECOLI (SWALL:P42908) (286 aa) fasta scores: E(): 8.2e-45%2C 87.59 38d in 137 aa and to Yersinia pestis putative aldolase AgaY or Ypo0844 SWALL:Q8ZHP6 (EMBL:AJ414145) (284 aa) fasta scores: E(): 3e-28%2C 56.2 38d in 137 aa. This CDS has undergone a large deletion event removing the 3'end of the coding sequence;gbkey=CDS;gene=agaY;inference=similar to sequence:UniProtKB:P42908;product=tagatose-bisphosphate aldolase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2638542	2638949	.	+	.	ID=id4299;Note=Pfam match to entry PF01116 F_bP_aldolase%2CFructose-bisphosphate aldolase class-II%2C score 219.2%2CE-value 4.1e-63;gbkey=misc_feature;gene=agaY;inference=protein motif:PFAM:PF01116
AM286415.1	EMBL	gene	2639222	2639968	.	+	.	ID=gene2400;Name=YE2451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2451
AM286415.1	EMBL	CDS	2639222	2639968	.	+	0	ID=cds2328;Parent=gene2400;Dbxref=EnsemblGenomes-Gn:YE2451,EnsemblGenomes-Tr:CAL12497,InterPro:IPR011055,InterPro:IPR016047,InterPro:IPR018392,UniProtKB/TrEMBL:A1JRZ5,NCBI_GP:CAL12497.1;Name=CAL12497.1;Note=Similar to Escherichia coli O157:H7 putative lipoprotein Ecs3738 SWALL:Q8X2T2 (EMBL:AP002563) (259 aa) fasta scores: E(): 4.3e-52%2C 64.4 38d in 236 aa and to Escherichia coli hypothetical lipoprotein YgeR precursor or b2865 SWALL:YGER_ECOLI (SWALL:Q46798) (251 aa) fasta scores: E(): 1.3e-51%2C 63.98 38d in 236 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q46798;product=putative lipoprotein;protein_id=CAL12497.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2639267	2639299	.	+	.	ID=id4300;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2639360	2639491	.	+	.	ID=id4301;Note=Pfam match to entry PF01476 LysM%2C LysM domain %2Cscore 57.6%2C E-value 1.8e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF01476
AM286415.1	EMBL	sequence_feature	2639687	2639935	.	+	.	ID=id4302;Note=Pfam match to entry PF01551 Peptidase_M37%2CPeptidase family M23/M37%2C score 137.7%2C E-value 1.4e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF01551
AM286415.1	EMBL	repeat_region	2640020	2640898	.	+	.	ID=id4303;Note=IS4-like insertion sequence element IS1665;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	2640020	2640035	.	+	.	ID=id4304;Note=alternate type inverted repeat for IS4-like element;gbkey=repeat_region
AM286415.1	EMBL	gene	2640103	2640552	.	+	.	ID=gene2401;Name=YE2452;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2452;part=1/2
AM286415.1	EMBL	gene	2640554	2640889	.	+	.	ID=gene2401;Name=YE2452;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2452;part=2/2
AM286415.1	EMBL	CDS	2640103	2640552	.	+	0	ID=cds2329;Parent=gene2401;Dbxref=EnsemblGenomes-Gn:YE2452,EnsemblGenomes-Tr:CAL12498,InterPro:IPR024473,UniProtKB/TrEMBL:A1JS05,NCBI_GP:CAL12498.1;Name=CAL12498.1;Note=Similar to the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 1.2e-51%2C 49.77 id in 440 aa%2C and Shigella flexneri IS4 S0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 1.2e-51%2C48.34 38d in 422 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting%2C following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL12498.1;transl_table=11
AM286415.1	EMBL	CDS	2640554	2640889	.	+	0	ID=cds2329;Parent=gene2401;Dbxref=EnsemblGenomes-Gn:YE2452,EnsemblGenomes-Tr:CAL12498,InterPro:IPR024473,UniProtKB/TrEMBL:A1JS05,NCBI_GP:CAL12498.1;Name=CAL12498.1;Note=Similar to the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 1.2e-51%2C 49.77 id in 440 aa%2C and Shigella flexneri IS4 S0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 1.2e-51%2C48.34 38d in 422 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting%2C following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL12498.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2640553	2640559	.	+	.	ID=id4305;Note=possible site of programmed ribosomal slippage;gbkey=misc_feature
AM286415.1	EMBL	stem_loop	2640866	2640897	.	+	.	ID=id4306;gbkey=stem_loop
AM286415.1	EMBL	INVERTED	2640883	2640898	.	-	.	ID=id4307;Note=Inverted repeat for IS4-like element;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	2640954	2641592	.	-	.	ID=gene2402;Name=YE2454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2454
AM286415.1	EMBL	CDS	2640954	2641592	.	-	0	ID=cds2330;Parent=gene2402;Dbxref=EnsemblGenomes-Gn:YE2454,EnsemblGenomes-Tr:CAL12499,GOA:A1JS09,InterPro:IPR003500,InterPro:IPR022133,UniProtKB/TrEMBL:A1JS09,NCBI_GP:CAL12499.1;Name=CAL12499.1;gbkey=CDS;product=putative sugar-phosphate isomerase;protein_id=CAL12499.1;transl_table=11
AM286415.1	EMBL	gene	2641862	2642227	.	-	.	ID=gene2403;Name=YE2455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2455
AM286415.1	EMBL	CDS	2641862	2642227	.	-	0	ID=cds2331;Parent=gene2403;Dbxref=EnsemblGenomes-Gn:YE2455,EnsemblGenomes-Tr:CAL12500,InterPro:IPR011050,InterPro:IPR012332,UniProtKB/TrEMBL:A1JS12,NCBI_GP:CAL12500.1;Name=CAL12500.1;Note=Weakly similar in parts to Bordetella bronchiseptica pertactin Prn SWALL:Q9ALQ0 (EMBL:AY007267) (256 aa) fasta scores: E(): 0.032%2C 35.21 38d in 71 aa;gbkey=CDS;inference=similar to sequence:INSDC:AY007267;product=hypothetical protein;protein_id=CAL12500.1;transl_table=11
AM286415.1	EMBL	gene	2642538	2643197	.	-	.	ID=gene2404;Name=YE2457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2457
AM286415.1	EMBL	CDS	2642538	2643197	.	-	0	ID=cds2332;Parent=gene2404;Dbxref=EnsemblGenomes-Gn:YE2457,EnsemblGenomes-Tr:CAL12501,GOA:A1JS14,InterPro:IPR011038,InterPro:IPR012674,InterPro:IPR015304,UniProtKB/TrEMBL:A1JS14,NCBI_GP:CAL12501.1;Name=CAL12501.1;Note=Similar to Salmonella typhi hypothetical protein Sty1858 SWALL:Q8Z6C9 (EMBL:AL627271) (216 aa) fasta scores: E(): 7e-49%2C 56.33 38d in 213 aa and to Escherichia coli hypothetical protein YodA or b1973 SWALL:YODA_ECOLI (SWALL:P76344) (216 aa) fasta scores: E(): 5.2e-47%2C 54.33 id in 219 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76344;product=putative exported protein;protein_id=CAL12501.1;transl_table=11
AM286415.1	EMBL	gene	2643393	2643965	.	-	.	ID=gene2405;Name=YE2458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2458
AM286415.1	EMBL	CDS	2643393	2643965	.	-	0	ID=cds2333;Parent=gene2405;Dbxref=EnsemblGenomes-Gn:YE2458,EnsemblGenomes-Tr:CAL12502,InterPro:IPR010282,InterPro:IPR011051,InterPro:IPR014710,UniProtKB/TrEMBL:A1JS17,NCBI_GP:CAL12502.1;Name=CAL12502.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12502.1;transl_table=11
AM286415.1	EMBL	gene	2643965	2645335	.	-	.	ID=gene2406;Name=YE2459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2459
AM286415.1	EMBL	CDS	2643965	2645335	.	-	0	ID=cds2334;Parent=gene2406;Dbxref=EnsemblGenomes-Gn:YE2459,EnsemblGenomes-Tr:CAL12503,GOA:A1JS19,InterPro:IPR006680,InterPro:IPR010252,InterPro:IPR011059,UniProtKB/TrEMBL:A1JS19,NCBI_GP:CAL12503.1;Name=CAL12503.1;gbkey=CDS;product=putative chlorohydrolase;protein_id=CAL12503.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2644058	2645014	.	-	.	ID=id4308;Note=Pfam match to entry PF01685 ATZ_TRZ%2CChlorohydrolase%2C score 91.0%2C E-value 1.6e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF01685
AM286415.1	EMBL	gene	2645484	2646251	.	+	.	ID=gene2407;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=YE2460
AM286415.1	EMBL	CDS	2645484	2646251	.	+	0	ID=cds2335;Parent=gene2407;Dbxref=EnsemblGenomes-Gn:YE2460,EnsemblGenomes-Tr:CAL12504,GOA:A1JS22,InterPro:IPR000524,InterPro:IPR010248,InterPro:IPR011663,InterPro:IPR011991,InterPro:IPR028978,UniProtKB/TrEMBL:A1JS22,NCBI_GP:CAL12504.1;Name=CAL12504.1;gbkey=CDS;gene=hutC;product=putative GntR-family transcriptional regulatory protein;protein_id=CAL12504.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2645556	2645735	.	+	.	ID=id4309;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 89.4%2C E-value 4.7e-24;gbkey=misc_feature;gene=hutC;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	sequence_feature	2645613	2645687	.	+	.	ID=id4310;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=misc_feature;gene=hutC;inference=protein motif:Prosite:PS00043
AM286415.1	EMBL	sequence_feature	2645616	2645681	.	+	.	ID=id4311;Note=Predicted helix-turn-helix motif with score 1481.000%2C SD 4.23 at aa 45-66%2C sequence PSESELVAELGVSRMTINRALR;gbkey=misc_feature;gene=hutC
AM286415.1	EMBL	gene	2646387	2647607	.	+	.	ID=gene2408;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=YE2461
AM286415.1	EMBL	CDS	2646387	2647607	.	+	0	ID=cds2336;Parent=gene2408;Dbxref=EnsemblGenomes-Gn:YE2461,EnsemblGenomes-Tr:CAL12505,GOA:A1JS25,InterPro:IPR005920,InterPro:IPR011059,NCBI_GP:CAL12505.1;Name=CAL12505.1;gbkey=CDS;gene=hutI;product=imidazolonepropionase;protein_id=CAL12505.1;transl_table=11
AM286415.1	EMBL	gene	2647604	2648413	.	+	.	ID=gene2409;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=YE2462
AM286415.1	EMBL	CDS	2647604	2648413	.	+	0	ID=cds2337;Parent=gene2409;Dbxref=EnsemblGenomes-Gn:YE2462,EnsemblGenomes-Tr:CAL12506,GOA:A1JS28,InterPro:IPR002508,InterPro:IPR007709,InterPro:IPR010247,UniProtKB/TrEMBL:A1JS28,NCBI_GP:CAL12506.1;Name=CAL12506.1;gbkey=CDS;gene=hutG;product=putative N-formylglutamate amidohydrolase;protein_id=CAL12506.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2648102	2648134	.	+	.	ID=id4312;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hutG;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2648536	2649618	.	-	.	ID=gene2410;Name=YE2463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2463
AM286415.1	EMBL	CDS	2648536	2649618	.	-	0	ID=cds2338;Parent=gene2410;Dbxref=EnsemblGenomes-Gn:YE2463,EnsemblGenomes-Tr:CAL12507,GOA:A1JS30,InterPro:IPR001702,InterPro:IPR001897,InterPro:IPR023614,UniProtKB/TrEMBL:A1JS30,NCBI_GP:CAL12507.1;Name=CAL12507.1;Note=Highly similar to many outermembrane porins including: Escherichia coli outer membrane porin protein NmpC precursor or Phma or b0553 SWALL:NMPC_ECOLI (SWALL:P21420) (365 aa) fasta scores: E(): 2.9e-74%2C 57.64 id in 373 aa%2C Yersinia pestis similar to ompf SWALL:Q9ZC71 (EMBL:AL031866) (315 aa) fasta scores: E(): 1e-90%2C 81.16 id in 292 aa and to Bacteriophage PA-2 outer membrane porin protein LC precursor SWALL:PORI_BPPA2 (SWALL:P07238) (365 aa) fasta scores: E(): 6e-75%2C 57.9 38d in 373 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P21420;product=outer membrane porin protein;protein_id=CAL12507.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2648539	2649315	.	-	.	ID=id4313;Note=Pfam match to entry PF00267 Gram-ve_porins%2CGram-negative porin%2C score 326.2%2C E-value 2.4e-95;gbkey=misc_feature;inference=protein motif:PFAM:PF00267
AM286415.1	EMBL	gene	2650344	2651336	.	-	.	ID=gene2411;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=YE2465
AM286415.1	EMBL	CDS	2650344	2651336	.	-	0	ID=cds2339;Parent=gene2411;Dbxref=EnsemblGenomes-Gn:YE2465,EnsemblGenomes-Tr:CAL12508,GOA:A1JS32,InterPro:IPR007036,InterPro:IPR016681,NCBI_GP:CAL12508.1;Name=CAL12508.1;gbkey=CDS;gene=astE;product=succinylglutamate desuccinylase;protein_id=CAL12508.1;transl_table=11
AM286415.1	EMBL	gene	2651401	2652744	.	-	.	ID=gene2412;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=YE2466
AM286415.1	EMBL	CDS	2651401	2652744	.	-	0	ID=cds2340;Parent=gene2412;Dbxref=EnsemblGenomes-Gn:YE2466,EnsemblGenomes-Tr:CAL12509,GOA:A1JS35,InterPro:IPR007079,NCBI_GP:CAL12509.1;Name=CAL12509.1;gbkey=CDS;gene=astB;product=succinylarginine dihydrolase;protein_id=CAL12509.1;transl_table=11
AM286415.1	EMBL	gene	2652787	2654253	.	-	.	ID=gene2413;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=YE2467
AM286415.1	EMBL	CDS	2652787	2654253	.	-	0	ID=cds2341;Parent=gene2413;Dbxref=EnsemblGenomes-Gn:YE2467,EnsemblGenomes-Tr:CAL12510,GOA:A1JS36,InterPro:IPR015590,InterPro:IPR016160,InterPro:IPR016161,InterPro:IPR016162,InterPro:IPR016163,InterPro:IPR017649,InterPro:IPR029510,UniProtKB/TrEMBL:A1JS36,NCBI_GP:CAL12510.1;Name=CAL12510.1;gbkey=CDS;gene=astD;product=succinylglutamic semialdehyde dehydrogenase;protein_id=CAL12510.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2652877	2654238	.	-	.	ID=id4314;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 283.6%2C E-value 1.6e-82;gbkey=misc_feature;gene=astD;inference=protein motif:PFAM:PF00171
AM286415.1	EMBL	sequence_feature	2653417	2653452	.	-	.	ID=id4315;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;gbkey=misc_feature;gene=astD;inference=protein motif:Prosite:PS00070
AM286415.1	EMBL	sequence_feature	2653513	2653536	.	-	.	ID=id4316;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=misc_feature;gene=astD;inference=protein motif:Prosite:PS00687
AM286415.1	EMBL	gene	2654265	2655302	.	-	.	ID=gene2414;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=YE2468
AM286415.1	EMBL	CDS	2654265	2655302	.	-	0	ID=cds2342;Parent=gene2414;Dbxref=EnsemblGenomes-Gn:YE2468,EnsemblGenomes-Tr:CAL12511,GOA:A1JS43,InterPro:IPR007041,InterPro:IPR016181,InterPro:IPR017650,NCBI_GP:CAL12511.1;Name=CAL12511.1;gbkey=CDS;gene=astA;product=arginine N-succinyltransferase;protein_id=CAL12511.1;transl_table=11
AM286415.1	EMBL	gene	2655360	2656604	.	-	.	ID=gene2415;Name=astC;gbkey=Gene;gene=astC;gene_biotype=protein_coding;gene_synonym=argM,cstC;locus_tag=YE2469
AM286415.1	EMBL	CDS	2655360	2656604	.	-	0	ID=cds2343;Parent=gene2415;Dbxref=EnsemblGenomes-Gn:YE2469,EnsemblGenomes-Tr:CAL12512,GOA:A1JS45,InterPro:IPR004636,InterPro:IPR005814,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR017652,InterPro:IPR026330,NCBI_GP:CAL12512.1;Name=CAL12512.1;gbkey=CDS;gene=astC;product=succinylornithine aminotransferase;protein_id=CAL12512.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2655378	2656559	.	-	.	ID=id4317;Note=Pfam match to entry PF00202 aminotran_3%2CAminotransferase class-III%2C score 541.5%2C E-value 3.7e-160;gbkey=misc_feature;gene=astC;inference=protein motif:PFAM:PF00202
AM286415.1	EMBL	sequence_feature	2655810	2655923	.	-	.	ID=id4318;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=astC;inference=protein motif:Prosite:PS00600
AM286415.1	EMBL	gene	2657213	2658646	.	-	.	ID=gene2416;Name=YE2470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2470
AM286415.1	EMBL	CDS	2657213	2658646	.	-	0	ID=cds2344;Parent=gene2416;Dbxref=EnsemblGenomes-Gn:YE2470,EnsemblGenomes-Tr:CAL12513,GOA:A1JS49,InterPro:IPR000524,InterPro:IPR004839,InterPro:IPR011991,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JS49,NCBI_GP:CAL12513.1;Name=CAL12513.1;gbkey=CDS;product=putative GntR-family regulatory protein;protein_id=CAL12513.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2657252	2658163	.	-	.	ID=id4319;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 32.6%2C E-value 1.8e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	2658449	2658628	.	-	.	ID=id4320;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 53.6%2C E-value 2.8e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	gene	2658831	2660279	.	+	.	ID=gene2417;Name=YE2471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2471
AM286415.1	EMBL	CDS	2658831	2660279	.	+	0	ID=cds2345;Parent=gene2417;Dbxref=EnsemblGenomes-Gn:YE2471,EnsemblGenomes-Tr:CAL12514,GOA:A1JS53,InterPro:IPR002585,UniProtKB/TrEMBL:A1JS53,NCBI_GP:CAL12514.1;Name=CAL12514.1;Note=Similar to Pseudomonas aeruginosa cyanide insensitive terminal oxidase CioA or Pa3930 SWALL:O07440 (EMBL:Y10528) (488 aa) fasta scores: E(): 5.8e-155%2C 78.39 id in 486 aa%2C Salmonella typhimurium cytochrome Bd2 subunit I Stm0360 SWALL:Q8ZRG3 (EMBL:AE008712) (467 aa) fasta scores: E(): 4.2e-144%2C 77.22 38d in 461 aa and to Bacillus subtilis cytochrome D ubiquinol oxidase subunit I CydA SWALL:CYDA_BACSU (SWALL:P94364) (468 aa) fasta scores: E(): 1e-53%2C 36.54 38d in 446 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P94364;product=putative cytochrome oxidase subunit;protein_id=CAL12514.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2658855	2660210	.	+	.	ID=id4321;Note=Pfam match to entry PF01654 Bac_Ubq_Cox%2C Bacterial Cytochrome Ubiquinol Oxidase%2C score 807.0%2C E-value 4.5e-240;gbkey=misc_feature;inference=protein motif:PFAM:PF01654
AM286415.1	EMBL	sequence_feature	2658888	2658956	.	+	.	ID=id4322;Note=9 probable transmembrane helices predicted for YE2471 by TMHMM2.0 at aa 20-42%2C 55-77%2C 97-119%2C 126-148%2C186-208%2C 221-238%2C 323-345%2C 358-380 and 406-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	2658993	2659061	.	+	.	ID=id4322;Note=9 probable transmembrane helices predicted for YE2471 by TMHMM2.0 at aa 20-42%2C 55-77%2C 97-119%2C 126-148%2C186-208%2C 221-238%2C 323-345%2C 358-380 and 406-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	2659119	2659187	.	+	.	ID=id4322;Note=9 probable transmembrane helices predicted for YE2471 by TMHMM2.0 at aa 20-42%2C 55-77%2C 97-119%2C 126-148%2C186-208%2C 221-238%2C 323-345%2C 358-380 and 406-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	2659206	2659274	.	+	.	ID=id4322;Note=9 probable transmembrane helices predicted for YE2471 by TMHMM2.0 at aa 20-42%2C 55-77%2C 97-119%2C 126-148%2C186-208%2C 221-238%2C 323-345%2C 358-380 and 406-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	2659386	2659454	.	+	.	ID=id4322;Note=9 probable transmembrane helices predicted for YE2471 by TMHMM2.0 at aa 20-42%2C 55-77%2C 97-119%2C 126-148%2C186-208%2C 221-238%2C 323-345%2C 358-380 and 406-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	2659491	2659544	.	+	.	ID=id4322;Note=9 probable transmembrane helices predicted for YE2471 by TMHMM2.0 at aa 20-42%2C 55-77%2C 97-119%2C 126-148%2C186-208%2C 221-238%2C 323-345%2C 358-380 and 406-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	2659797	2659865	.	+	.	ID=id4322;Note=9 probable transmembrane helices predicted for YE2471 by TMHMM2.0 at aa 20-42%2C 55-77%2C 97-119%2C 126-148%2C186-208%2C 221-238%2C 323-345%2C 358-380 and 406-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	2659902	2659970	.	+	.	ID=id4322;Note=9 probable transmembrane helices predicted for YE2471 by TMHMM2.0 at aa 20-42%2C 55-77%2C 97-119%2C 126-148%2C186-208%2C 221-238%2C 323-345%2C 358-380 and 406-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	2660046	2660114	.	+	.	ID=id4322;Note=9 probable transmembrane helices predicted for YE2471 by TMHMM2.0 at aa 20-42%2C 55-77%2C 97-119%2C 126-148%2C186-208%2C 221-238%2C 323-345%2C 358-380 and 406-428;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	2660282	2661289	.	+	.	ID=gene2418;Name=YE2472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2472
AM286415.1	EMBL	CDS	2660282	2661289	.	+	0	ID=cds2346;Parent=gene2418;Dbxref=EnsemblGenomes-Gn:YE2472,EnsemblGenomes-Tr:CAL12515,GOA:A1JS55,InterPro:IPR003317,UniProtKB/TrEMBL:A1JS55,NCBI_GP:CAL12515.1;Name=CAL12515.1;Note=Similar to Pseudomonas aeruginosa cyanide insensitive terminal oxidase CioB or Pa3929 SWALL:O07441 (EMBL:Y10528) (335 aa) fasta scores: E(): 2.4e-99%2C 73.43 id in 335 aa%2C Salmonella typhimurium cytochrome Bd2 subunit II Stm0361 SWALL:Q8ZRG2 (EMBL:AE008712) (336 aa) fasta scores: E(): 5.8e-90%2C 68.15 38d in 336 aa%2C and to Bacillus subtilis cytochrome d ubiquinol oxidase subunit ii cydB SWALL:CYDB_BACSU (SWALL:P94365) (338 aa) fasta scores: E(): 2.9e-22%2C 26.76 38d in 340 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P94365;product=putative cytochrome oxidase subunit;protein_id=CAL12515.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2660288	2661268	.	+	.	ID=id4323;Note=Pfam match to entry PF02322 Cyto_ox_2%2C Cytochrome oxidase subunit II%2C score 548.4%2C E-value 3.1e-162;gbkey=misc_feature;inference=protein motif:PFAM:PF02322
AM286415.1	EMBL	sequence_feature	2660300	2660359	.	+	.	ID=id4324;Note=8 probable transmembrane helices predicted for YE2472 by TMHMM2.0 at aa 7-26%2C 74-96%2C 117-139%2C 159-181%2C194-216%2C 231-248%2C 261-283 and 298-320;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	2660501	2660569	.	+	.	ID=id4324;Note=8 probable transmembrane helices predicted for YE2472 by TMHMM2.0 at aa 7-26%2C 74-96%2C 117-139%2C 159-181%2C194-216%2C 231-248%2C 261-283 and 298-320;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	2660630	2660698	.	+	.	ID=id4324;Note=8 probable transmembrane helices predicted for YE2472 by TMHMM2.0 at aa 7-26%2C 74-96%2C 117-139%2C 159-181%2C194-216%2C 231-248%2C 261-283 and 298-320;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	2660756	2660824	.	+	.	ID=id4324;Note=8 probable transmembrane helices predicted for YE2472 by TMHMM2.0 at aa 7-26%2C 74-96%2C 117-139%2C 159-181%2C194-216%2C 231-248%2C 261-283 and 298-320;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	2660861	2660929	.	+	.	ID=id4324;Note=8 probable transmembrane helices predicted for YE2472 by TMHMM2.0 at aa 7-26%2C 74-96%2C 117-139%2C 159-181%2C194-216%2C 231-248%2C 261-283 and 298-320;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	2660972	2661025	.	+	.	ID=id4324;Note=8 probable transmembrane helices predicted for YE2472 by TMHMM2.0 at aa 7-26%2C 74-96%2C 117-139%2C 159-181%2C194-216%2C 231-248%2C 261-283 and 298-320;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	2661062	2661130	.	+	.	ID=id4324;Note=8 probable transmembrane helices predicted for YE2472 by TMHMM2.0 at aa 7-26%2C 74-96%2C 117-139%2C 159-181%2C194-216%2C 231-248%2C 261-283 and 298-320;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	2661173	2661241	.	+	.	ID=id4324;Note=8 probable transmembrane helices predicted for YE2472 by TMHMM2.0 at aa 7-26%2C 74-96%2C 117-139%2C 159-181%2C194-216%2C 231-248%2C 261-283 and 298-320;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	2660732	2660794	.	+	.	ID=id4325;Note=PS00079 Multicopper oxidases signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00079
AM286415.1	EMBL	sequence_feature	2660777	2660809	.	+	.	ID=id4326;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2661522	2663303	.	+	.	ID=gene2419;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;gene_synonym=narR;locus_tag=YE2473
AM286415.1	EMBL	CDS	2661522	2663303	.	+	0	ID=cds2347;Parent=gene2419;Dbxref=EnsemblGenomes-Gn:YE2473,EnsemblGenomes-Tr:CAL12516,GOA:A1JS62,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR005467,InterPro:IPR011712,InterPro:IPR016380,InterPro:IPR029095,UniProtKB/TrEMBL:A1JS62,NCBI_GP:CAL12516.1;Name=CAL12516.1;gbkey=CDS;gene=narX;product=nitrate/nitrite sensor protein;protein_id=CAL12516.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2661531	2661599	.	+	.	ID=id4327;Note=2 probable transmembrane helices predicted for YE2473 by TMHMM2.0 at aa 4-26 and 146-168;gbkey=misc_feature;gene=narX;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2661957	2662025	.	+	.	ID=id4327;Note=2 probable transmembrane helices predicted for YE2473 by TMHMM2.0 at aa 4-26 and 146-168;gbkey=misc_feature;gene=narX;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2661978	2662190	.	+	.	ID=id4328;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 60.7%2C E-value 2.1e-15;gbkey=misc_feature;gene=narX;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	2663007	2663285	.	+	.	ID=id4329;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 57.6%2C E-value 1.7e-14;gbkey=misc_feature;gene=narX;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	2663341	2664297	.	-	.	ID=gene2420;Name=YE2474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2474
AM286415.1	EMBL	CDS	2663341	2664297	.	-	0	ID=cds2348;Parent=gene2420;Dbxref=EnsemblGenomes-Gn:YE2474,EnsemblGenomes-Tr:CAL12517,GOA:A1JS68,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JS68,NCBI_GP:CAL12517.1;Name=CAL12517.1;Note=Similar to Escherichia coli transcriptional regulator Cbl or b1987 SWALL:CBL_ECOLI (SWALL:Q47083) (316 aa) fasta scores: E(): 3.5e-83%2C 67.61 38d in 318 aa and to Klebsiella aerogenes transcriptional regulator Cbl SWALL:CBL_KLEAE (SWALL:Q08598) (316 aa) fasta scores: E(): 7.2e-83%2C 68.55 38d in 318 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q47083;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL12517.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2663410	2664036	.	-	.	ID=id4330;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 159.3%2C E-value 4.3e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	2664106	2664291	.	-	.	ID=id4331;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 63.8%2C E-value 2.3e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2664154	2664246	.	-	.	ID=id4332;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	2664184	2664249	.	-	.	ID=id4333;Note=Predicted helix-turn-helix motif with score 1655.000%2C SD 4.82 at aa 17-38%2C sequence YNLTEVANTLFTSQSGVSRHIR;gbkey=misc_feature
AM286415.1	EMBL	gene	2664665	2665831	.	+	.	ID=gene2421;Name=YE2475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2475
AM286415.1	EMBL	CDS	2664665	2665831	.	+	0	ID=cds2349;Parent=gene2421;Dbxref=EnsemblGenomes-Gn:YE2475,EnsemblGenomes-Tr:CAL12518,GOA:A1JS74,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JS74,NCBI_GP:CAL12518.1;Name=CAL12518.1;Note=Similar to many putative membrane transport proteins including: Yersinia pestis putative sugar transport protein Ypo0798 SWALL:Q8ZHT6 (EMBL:AJ414144) (386 aa) fasta scores: E(): 6.8e-68%2C 53.88 38d in 373 aa%2CEscherichia coli protein precursor AraJ or b0396 SWALL:ARAJ_ECOLI (SWALL:P23910) (394 aa) fasta scores: E(): 2.8e-39%2C 32.56 38d in 390 aa and to Streptomyces lividans chloramphenicol resistance protein CmlR SWALL:CMLR_STRLI (SWALL:P31141) (392 aa) fasta scores: E(): 1.8e-32%2C 33.59 38d in 387 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P31141;product=putative membrane transport protein;protein_id=CAL12518.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2664677	2664745	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2664788	2664856	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2664875	2664934	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2664944	2665012	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2665049	2665117	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2665145	2665213	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2665274	2665342	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2665370	2665438	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2665472	2665525	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2665538	2665606	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2665643	2665711	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2665721	2665780	.	+	.	ID=id4334;Note=12 probable transmembrane helices predicted for YE2475 by TMHMM2.0 at aa 5-27%2C 42-64%2C 71-90%2C 94-116%2C129-151%2C 161-183%2C 204-226%2C 236-258%2C 270-287%2C 292-314%2C327-349 and 353-372;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2664680	2665828	.	+	.	ID=id4335;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -55.3%2C E-value 7e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	2666020	2666856	.	+	.	ID=gene2422;Name=YE2476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2476
AM286415.1	EMBL	CDS	2666020	2666856	.	+	0	ID=cds2350;Parent=gene2422;Dbxref=EnsemblGenomes-Gn:YE2476,EnsemblGenomes-Tr:CAL12519,GOA:A1JS78,InterPro:IPR007037,InterPro:IPR013113,InterPro:IPR017927,InterPro:IPR017938,UniProtKB/TrEMBL:A1JS78,NCBI_GP:CAL12519.1;Name=CAL12519.1;Note=Similar to several proteins involved in iron acquisition: Vibrio vulnificus vulnibactin utilization protein ViuB SWALL:VIUB_VIBVU (SWALL:Q56743) (271 aa) fasta scores: E(): 2.9e-29%2C 36.26 38d in 262 aa%2C and to Stigmatella aurantiaca MxcB SWALL:Q9F641 (EMBL:AF299336) (270 aa) fasta scores: E(): 2.3e-22%2C 31.93 38d in 263 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56743;product=conserved hypothetical protein;protein_id=CAL12519.1;transl_table=11
AM286415.1	EMBL	gene	2667076	2668185	.	+	.	ID=gene2423;Name=chaA;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=YE2477
AM286415.1	EMBL	CDS	2667076	2668185	.	+	0	ID=cds2351;Parent=gene2423;Dbxref=EnsemblGenomes-Gn:YE2477,EnsemblGenomes-Tr:CAL12520,GOA:A1JS80,InterPro:IPR004713,InterPro:IPR004837,UniProtKB/TrEMBL:A1JS80,NCBI_GP:CAL12520.1;Name=CAL12520.1;gbkey=CDS;gene=chaA;product=calcium/proton antiporter;protein_id=CAL12520.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2667124	2667177	.	+	.	ID=id4336;Note=10 probable transmembrane helices predicted for YE2477 by TMHMM2.0 at aa 17-34%2C 38-60%2C 73-95%2C 110-129%2C136-158%2C 168-190%2C 224-241%2C 261-283%2C 292-314 and 329-351;gbkey=misc_feature;gene=chaA;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	2667187	2667255	.	+	.	ID=id4336;Note=10 probable transmembrane helices predicted for YE2477 by TMHMM2.0 at aa 17-34%2C 38-60%2C 73-95%2C 110-129%2C136-158%2C 168-190%2C 224-241%2C 261-283%2C 292-314 and 329-351;gbkey=misc_feature;gene=chaA;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	2667292	2667360	.	+	.	ID=id4336;Note=10 probable transmembrane helices predicted for YE2477 by TMHMM2.0 at aa 17-34%2C 38-60%2C 73-95%2C 110-129%2C136-158%2C 168-190%2C 224-241%2C 261-283%2C 292-314 and 329-351;gbkey=misc_feature;gene=chaA;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	2667403	2667462	.	+	.	ID=id4336;Note=10 probable transmembrane helices predicted for YE2477 by TMHMM2.0 at aa 17-34%2C 38-60%2C 73-95%2C 110-129%2C136-158%2C 168-190%2C 224-241%2C 261-283%2C 292-314 and 329-351;gbkey=misc_feature;gene=chaA;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	2667481	2667549	.	+	.	ID=id4336;Note=10 probable transmembrane helices predicted for YE2477 by TMHMM2.0 at aa 17-34%2C 38-60%2C 73-95%2C 110-129%2C136-158%2C 168-190%2C 224-241%2C 261-283%2C 292-314 and 329-351;gbkey=misc_feature;gene=chaA;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	2667577	2667645	.	+	.	ID=id4336;Note=10 probable transmembrane helices predicted for YE2477 by TMHMM2.0 at aa 17-34%2C 38-60%2C 73-95%2C 110-129%2C136-158%2C 168-190%2C 224-241%2C 261-283%2C 292-314 and 329-351;gbkey=misc_feature;gene=chaA;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	2667745	2667798	.	+	.	ID=id4336;Note=10 probable transmembrane helices predicted for YE2477 by TMHMM2.0 at aa 17-34%2C 38-60%2C 73-95%2C 110-129%2C136-158%2C 168-190%2C 224-241%2C 261-283%2C 292-314 and 329-351;gbkey=misc_feature;gene=chaA;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	2667856	2667924	.	+	.	ID=id4336;Note=10 probable transmembrane helices predicted for YE2477 by TMHMM2.0 at aa 17-34%2C 38-60%2C 73-95%2C 110-129%2C136-158%2C 168-190%2C 224-241%2C 261-283%2C 292-314 and 329-351;gbkey=misc_feature;gene=chaA;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	2667949	2668017	.	+	.	ID=id4336;Note=10 probable transmembrane helices predicted for YE2477 by TMHMM2.0 at aa 17-34%2C 38-60%2C 73-95%2C 110-129%2C136-158%2C 168-190%2C 224-241%2C 261-283%2C 292-314 and 329-351;gbkey=misc_feature;gene=chaA;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	2668060	2668128	.	+	.	ID=id4336;Note=10 probable transmembrane helices predicted for YE2477 by TMHMM2.0 at aa 17-34%2C 38-60%2C 73-95%2C 110-129%2C136-158%2C 168-190%2C 224-241%2C 261-283%2C 292-314 and 329-351;gbkey=misc_feature;gene=chaA;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	2668285	2669073	.	-	.	ID=gene2424;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;gene_synonym=psiH;locus_tag=YE2478
AM286415.1	EMBL	CDS	2668285	2669073	.	-	0	ID=cds2352;Parent=gene2424;Dbxref=EnsemblGenomes-Gn:YE2478,EnsemblGenomes-Tr:CAL12521,GOA:A1JS84,InterPro:IPR003714,InterPro:IPR027417,UniProtKB/TrEMBL:A1JS84,NCBI_GP:CAL12521.1;Name=CAL12521.1;gbkey=CDS;gene=phoH;product=putative phosphate starvation-inducible protein;protein_id=CAL12521.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2668288	2669073	.	-	.	ID=id4337;Note=Pfam match to entry PF02562 PhoH%2C PhoH-like protein%2C score 517.3%2C E-value 7.2e-153;gbkey=misc_feature;gene=phoH;inference=protein motif:PFAM:PF02562
AM286415.1	EMBL	sequence_feature	2668810	2668833	.	-	.	ID=id4338;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=phoH;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2669141	2669461	.	-	.	ID=gene2425;Name=YE2479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2479
AM286415.1	EMBL	CDS	2669141	2669461	.	-	0	ID=cds2353;Parent=gene2425;Dbxref=EnsemblGenomes-Gn:YE2479,EnsemblGenomes-Tr:CAL12522,UniProtKB/TrEMBL:A1JS86,NCBI_GP:CAL12522.1;Name=CAL12522.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12522.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2669165	2669197	.	-	.	ID=id4339;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2669606	2670313	.	-	.	ID=gene2426;Name=YE2480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2480
AM286415.1	EMBL	CDS	2669606	2670313	.	-	0	ID=cds2354;Parent=gene2426;Dbxref=EnsemblGenomes-Gn:YE2480,EnsemblGenomes-Tr:CAL12523,GOA:A1JS90,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JS90,NCBI_GP:CAL12523.1;Name=CAL12523.1;Note=Similar to Yersinia pestis hypothetical 27.4 kDa protein Ypo1955 SWALL:Q9ZC61 (EMBL:AL031866) (299 aa) fasta scores: E(): 2.2e-82%2C 80.17 38d in 232 aa.Note the extended N-terminus of the Y. pestis protein. It appears that Y. pestis has an extra segment of sequence at this point. This may have been an insertion in Y. pestis or a deletion from Y. enterocolitica. This is true for Y. pestis strains CO92 and KIM5. Also similar to Brucella suis 1330 acetyltransferase%2C GnaT family Bra0091 SWALL:AAN33301 (EMBL:AE014513) (225 aa) fasta scores: E(): 1.9e-40%2C 45.45 38d in 220 aa and to Brucella melitensis ribosomal-protein-serine acetyltransferase Bmeii0002 SWALL:Q8YE16 (EMBL:AE009639) (242 aa) fasta scores: E(): 2.8e-40%2C 44.69 38d in 226 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL031866;product=putative acetyltransferase;protein_id=CAL12523.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2669798	2670046	.	-	.	ID=id4340;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 35.3%2C E-value 8.9e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	2670529	2670996	.	-	.	ID=gene2427;Name=hmsS;gbkey=Gene;gene=hmsS;gene_biotype=protein_coding;locus_tag=YE2481
AM286415.1	EMBL	CDS	2670529	2670996	.	-	0	ID=cds2355;Parent=gene2427;Dbxref=EnsemblGenomes-Gn:YE2481,EnsemblGenomes-Tr:CAL12524,InterPro:IPR023829,UniProtKB/TrEMBL:A1JS92,NCBI_GP:CAL12524.1;Name=CAL12524.1;gbkey=CDS;gene=hmsS;product=haemin storage system%2C HmsS protein;protein_id=CAL12524.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2670895	2670963	.	-	.	ID=id4341;Note=2 probable transmembrane helices predicted for YE2481 by TMHMM2.0 at aa 12-34 and 54-76;gbkey=misc_feature;gene=hmsS;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2670769	2670837	.	-	.	ID=id4341;Note=2 probable transmembrane helices predicted for YE2481 by TMHMM2.0 at aa 12-34 and 54-76;gbkey=misc_feature;gene=hmsS;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2670993	2672327	.	-	.	ID=gene2428;Name=hmsR;gbkey=Gene;gene=hmsR;gene_biotype=protein_coding;locus_tag=YE2482
AM286415.1	EMBL	CDS	2670993	2672327	.	-	0	ID=cds2356;Parent=gene2428;Dbxref=EnsemblGenomes-Gn:YE2482,EnsemblGenomes-Tr:CAL12525,GOA:A1JS96,InterPro:IPR023853,InterPro:IPR029044,UniProtKB/TrEMBL:A1JS96,NCBI_GP:CAL12525.1;Name=CAL12525.1;gbkey=CDS;gene=hmsR;product=haemin storage system%2C HmsR protein;protein_id=CAL12525.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2672247	2672315	.	-	.	ID=id4342;Note=5 probable transmembrane helices predicted for YE2482 by TMHMM2.0 at aa 5-27%2C 32-54%2C 320-351%2C 361-383 and 396-418;gbkey=misc_feature;gene=hmsR;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2672166	2672234	.	-	.	ID=id4342;Note=5 probable transmembrane helices predicted for YE2482 by TMHMM2.0 at aa 5-27%2C 32-54%2C 320-351%2C 361-383 and 396-418;gbkey=misc_feature;gene=hmsR;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2671275	2671370	.	-	.	ID=id4342;Note=5 probable transmembrane helices predicted for YE2482 by TMHMM2.0 at aa 5-27%2C 32-54%2C 320-351%2C 361-383 and 396-418;gbkey=misc_feature;gene=hmsR;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2671179	2671247	.	-	.	ID=id4342;Note=5 probable transmembrane helices predicted for YE2482 by TMHMM2.0 at aa 5-27%2C 32-54%2C 320-351%2C 361-383 and 396-418;gbkey=misc_feature;gene=hmsR;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2671074	2671142	.	-	.	ID=id4342;Note=5 probable transmembrane helices predicted for YE2482 by TMHMM2.0 at aa 5-27%2C 32-54%2C 320-351%2C 361-383 and 396-418;gbkey=misc_feature;gene=hmsR;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	2671590	2672096	.	-	.	ID=id4343;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 137.6%2C E-value 1.4e-38;gbkey=misc_feature;gene=hmsR;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	2672317	2674230	.	-	.	ID=gene2429;Name=hmsF;gbkey=Gene;gene=hmsF;gene_biotype=protein_coding;locus_tag=YE2483
AM286415.1	EMBL	CDS	2672317	2674230	.	-	0	ID=cds2357;Parent=gene2429;Dbxref=EnsemblGenomes-Gn:YE2483,EnsemblGenomes-Tr:CAL12526,GOA:A1JSA0,InterPro:IPR002509,InterPro:IPR011330,InterPro:IPR023854,UniProtKB/TrEMBL:A1JSA0,NCBI_GP:CAL12526.1;Name=CAL12526.1;gbkey=CDS;gene=hmsF;product=haemin storage system%2C HmsF protein;protein_id=CAL12526.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2672851	2672898	.	-	.	ID=id4344;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;gene=hmsF;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	sequence_feature	2673532	2673672	.	-	.	ID=id4345;Note=Pfam match to entry PF01522 Polysacc_deacet%2CPolysaccharide deacetylase%2C score 15.6%2C E-value 0.00015;gbkey=misc_feature;gene=hmsF;inference=protein motif:PFAM:PF01522
AM286415.1	EMBL	gene	2674353	2676821	.	-	.	ID=gene2430;Name=hmsH;gbkey=Gene;gene=hmsH;gene_biotype=protein_coding;locus_tag=YE2484
AM286415.1	EMBL	CDS	2674353	2676821	.	-	0	ID=cds2358;Parent=gene2430;Dbxref=EnsemblGenomes-Gn:YE2484,EnsemblGenomes-Tr:CAL12527,GOA:A1JSA3,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR023870,UniProtKB/TrEMBL:A1JSA3,NCBI_GP:CAL12527.1;Name=CAL12527.1;gbkey=CDS;gene=hmsH;product=haemin storage system%2C HmsH protein;protein_id=CAL12527.1;transl_table=11
AM286415.1	EMBL	gene	2677500	2678717	.	-	.	ID=gene2431;Name=YE2485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2485
AM286415.1	EMBL	CDS	2677500	2678717	.	-	0	ID=cds2359;Parent=gene2431;Dbxref=EnsemblGenomes-Gn:YE2485,EnsemblGenomes-Tr:CAL12528,GOA:A1JSA6,InterPro:IPR000587,InterPro:IPR000994,InterPro:IPR028980,InterPro:IPR029149,UniProtKB/TrEMBL:A1JSA6,NCBI_GP:CAL12528.1;Name=CAL12528.1;gbkey=CDS;product=putative peptidase;protein_id=CAL12528.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2677512	2678192	.	-	.	ID=id4346;Note=Pfam match to entry PF00557 Peptidase_M24%2Cmetallopeptidase family M24%2C score 78.9%2C E-value 6.6e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00557
AM286415.1	EMBL	sequence_feature	2678259	2678282	.	-	.	ID=id4347;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2678568	2678636	.	-	.	ID=id4348;Note=1 probable transmembrane helix predicted for YE2485 by TMHMM2.0 at aa 28-50;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2678768	2679535	.	-	.	ID=gene2432;Name=YE2486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2486
AM286415.1	EMBL	CDS	2678768	2679535	.	-	0	ID=cds2360;Parent=gene2432;Dbxref=EnsemblGenomes-Gn:YE2486,EnsemblGenomes-Tr:CAL12529,GOA:A1JSA9,InterPro:IPR008090,InterPro:IPR022770,InterPro:IPR024726,UniProtKB/TrEMBL:A1JSA9,NCBI_GP:CAL12529.1;Name=CAL12529.1;gbkey=CDS;product=putative ferric iron reductase;protein_id=CAL12529.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2679218	2679286	.	-	.	ID=id4349;Note=1 probable transmembrane helix predicted for YE2486 by TMHMM2.0 at aa 84-106;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2679693	2680319	.	-	.	ID=gene2433;Name=YE2487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2487
AM286415.1	EMBL	CDS	2679693	2680319	.	-	0	ID=cds2361;Parent=gene2433;Dbxref=EnsemblGenomes-Gn:YE2487,EnsemblGenomes-Tr:CAL12530,GOA:A1JSB2,InterPro:IPR009000,InterPro:IPR012947,InterPro:IPR018163,InterPro:IPR018164,UniProtKB/TrEMBL:A1JSB2,NCBI_GP:CAL12530.1;Name=CAL12530.1;Note=Similar to several Eukaryotic and Prokaryotic proteins including: Mus musculus hypothetical protein Mgc2744 SWALL:Q99JS9 (EMBL:BC005711) (412 aa) fasta scores: E(): 1.4e-08%2C 31.12 38d in 196 aa and to Pyrococcus furiosus partial alanyl-tRNA synthetase matches COOH terminus Pf0086 SWALL:AAL80210 (EMBL:AE010135) (214 aa) fasta scores: E(): 1.5e-08%2C 28.78 38d in 205 aa;gbkey=CDS;inference=similar to sequence:INSDC:BC005711;product=hypothetical protein;protein_id=CAL12530.1;transl_table=11
AM286415.1	EMBL	gene	2680409	2681341	.	+	.	ID=gene2434;Name=YE2488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2488
AM286415.1	EMBL	CDS	2680409	2681341	.	+	0	ID=cds2362;Parent=gene2434;Dbxref=EnsemblGenomes-Gn:YE2488,EnsemblGenomes-Tr:CAL12531,GOA:A1JSB5,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JSB5,NCBI_GP:CAL12531.1;Name=CAL12531.1;Note=Similar to many Lys-family transcriptioanl regulators including: Klebsiella pneumoniae probable transcriptional regulator LtrA SWALL:LTRA_KLEPN (SWALL:P52689) (309 aa) fasta scores: E(): 1.2e-65%2C 58.36 id in 293 aa%2C and to Vibrio cholerae transcriptional regulator%2C lysr family vca0889 SWALL:Q9KL59 (EMBL:AE004416) (312 aa) fasta scores: E(): 3.4e-47%2C44.14 38d in 299 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P52689;product=putative Lys-family transcriptional regulatory protein;protein_id=CAL12531.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2680436	2680615	.	+	.	ID=id4350;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 86.2%2C E-value 4.2e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2680475	2680540	.	+	.	ID=id4351;Note=Predicted helix-turn-helix motif with score 2059.000%2C SD 6.20 at aa 23-44%2C sequence GSFSAVARQLGVSPSAISRSVS;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	2680478	2680570	.	+	.	ID=id4352;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	2680685	2681314	.	+	.	ID=id4353;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 164.2%2C E-value 1.5e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	2681392	2682261	.	-	.	ID=gene2435;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=YE2489
AM286415.1	EMBL	CDS	2681392	2682261	.	-	0	ID=cds2363;Parent=gene2435;Dbxref=EnsemblGenomes-Gn:YE2489,EnsemblGenomes-Tr:CAL12532,GOA:A1JSB8,InterPro:IPR004537,InterPro:IPR014431,InterPro:IPR014710,InterPro:IPR015392,InterPro:IPR015985,InterPro:IPR029063,UniProtKB/TrEMBL:A1JSB8,NCBI_GP:CAL12532.1;Name=CAL12532.1;gbkey=CDS;gene=tehB;product=putative tellurite resistance protein;protein_id=CAL12532.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2681407	2681985	.	-	.	ID=id4354;Note=Pfam match to entry PF03848 TehB%2C Tellurite resistance protein TehB%2C score 523.9%2C E-value 7.7e-155;gbkey=misc_feature;gene=tehB;inference=protein motif:PFAM:PF03848
AM286415.1	EMBL	gene	2682406	2682720	.	-	.	ID=gene2436;Name=YE2490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2490
AM286415.1	EMBL	CDS	2682406	2682720	.	-	0	ID=cds2364;Parent=gene2436;Dbxref=EnsemblGenomes-Gn:YE2490,EnsemblGenomes-Tr:CAL12533,GOA:A1JSC7,InterPro:IPR009056,UniProtKB/TrEMBL:A1JSC7,NCBI_GP:CAL12533.1;Name=CAL12533.1;Note=Similar to Helicobacter pylori J99 cytochrome C-553 precursor jhp1148 SWALL:C553_HELPJ (SWALL:Q9ZJZ9) (96 aa) fasta scores: E(): 0.0035%2C 34.69 38d in 98 aa and to Yersinia pestis putative cytochrome Ypo1948 SWALL:Q8ZF20 (EMBL:AJ414150) (103 aa) fasta scores: E(): 1.7e-28%2C 79.8 id in 104 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9ZJZ9;product=putative cytochrome;protein_id=CAL12533.1;transl_table=11
AM286415.1	EMBL	gene	2682720	2683169	.	-	.	ID=gene2437;Name=YE2491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2491
AM286415.1	EMBL	CDS	2682720	2683169	.	-	0	ID=cds2365;Parent=gene2437;Dbxref=EnsemblGenomes-Gn:YE2491,EnsemblGenomes-Tr:CAL12534,GOA:A1JSD2,InterPro:IPR012336,InterPro:IPR013740,UniProtKB/TrEMBL:A1JSD2,NCBI_GP:CAL12534.1;Name=CAL12534.1;gbkey=CDS;product=putative thioredoxin;protein_id=CAL12534.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2683026	2683058	.	-	.	ID=id4355;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2683198	2683911	.	-	.	ID=gene2438;Name=YE2492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2492
AM286415.1	EMBL	CDS	2683198	2683911	.	-	0	ID=cds2366;Parent=gene2438;Dbxref=EnsemblGenomes-Gn:YE2492,EnsemblGenomes-Tr:CAL12535,GOA:A1JSE1,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSE1,NCBI_GP:CAL12535.1;Name=CAL12535.1;gbkey=CDS;product=ABC transporter%2C ATP-binding protein;protein_id=CAL12535.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2683237	2683785	.	-	.	ID=id4356;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 215.8%2C E-value 4.1e-62;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2683417	2683461	.	-	.	ID=id4357;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2683741	2683764	.	-	.	ID=id4358;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2683915	2685036	.	-	.	ID=gene2439;Name=YE2493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2493
AM286415.1	EMBL	CDS	2683915	2685036	.	-	0	ID=cds2367;Parent=gene2439;Dbxref=EnsemblGenomes-Gn:YE2493,EnsemblGenomes-Tr:CAL12536,GOA:A1JSE8,InterPro:IPR003838,InterPro:IPR025857,UniProtKB/TrEMBL:A1JSE8,NCBI_GP:CAL12536.1;Name=CAL12536.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12536.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2683939	2684313	.	-	.	ID=id4359;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score 117.1%2C E-value 2.2e-32;gbkey=misc_feature;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	sequence_feature	2684911	2684979	.	-	.	ID=id4360;Note=4 probable transmembrane helices predicted for YE2493 by TMHMM2.0 at aa 20-42%2C 252-274%2C 302-324 and 334-356;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2684215	2684283	.	-	.	ID=id4360;Note=4 probable transmembrane helices predicted for YE2493 by TMHMM2.0 at aa 20-42%2C 252-274%2C 302-324 and 334-356;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2684065	2684133	.	-	.	ID=id4360;Note=4 probable transmembrane helices predicted for YE2493 by TMHMM2.0 at aa 20-42%2C 252-274%2C 302-324 and 334-356;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2683969	2684037	.	-	.	ID=id4360;Note=4 probable transmembrane helices predicted for YE2493 by TMHMM2.0 at aa 20-42%2C 252-274%2C 302-324 and 334-356;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2685062	2686354	.	-	.	ID=gene2440;Name=YE2494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2494
AM286415.1	EMBL	CDS	2685062	2686354	.	-	0	ID=cds2368;Parent=gene2440;Dbxref=EnsemblGenomes-Gn:YE2494,EnsemblGenomes-Tr:CAL12537,GOA:A1JSF3,InterPro:IPR003838,InterPro:IPR025857,UniProtKB/TrEMBL:A1JSF3,NCBI_GP:CAL12537.1;Name=CAL12537.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12537.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2685086	2685460	.	-	.	ID=id4361;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score 135.5%2C E-value 6.3e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	sequence_feature	2686229	2686297	.	-	.	ID=id4362;Note=4 probable transmembrane helices predicted for YE2494 by TMHMM2.0 at aa 20-42%2C 303-325%2C 354-376 and 391-413;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2685380	2685448	.	-	.	ID=id4362;Note=4 probable transmembrane helices predicted for YE2494 by TMHMM2.0 at aa 20-42%2C 303-325%2C 354-376 and 391-413;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2685227	2685295	.	-	.	ID=id4362;Note=4 probable transmembrane helices predicted for YE2494 by TMHMM2.0 at aa 20-42%2C 303-325%2C 354-376 and 391-413;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2685116	2685184	.	-	.	ID=id4362;Note=4 probable transmembrane helices predicted for YE2494 by TMHMM2.0 at aa 20-42%2C 303-325%2C 354-376 and 391-413;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	2685245	2685277	.	-	.	ID=id4363;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2686357	2687760	.	-	.	ID=gene2441;Name=YE2495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2495
AM286415.1	EMBL	CDS	2686357	2687760	.	-	0	ID=cds2369;Parent=gene2441;Dbxref=EnsemblGenomes-Gn:YE2495,EnsemblGenomes-Tr:CAL12538,InterPro:IPR007029,InterPro:IPR018758,UniProtKB/TrEMBL:A1JSF9,NCBI_GP:CAL12538.1;Name=CAL12538.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12538.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2687689	2687757	.	-	.	ID=id4364;Note=7 probable transmembrane helices predicted for YE2495 by TMHMM2.0 at aa 2-24%2C 34-51%2C 58-80%2C 119-141%2C153-175%2C 195-217 and 248-266;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	2687608	2687661	.	-	.	ID=id4364;Note=7 probable transmembrane helices predicted for YE2495 by TMHMM2.0 at aa 2-24%2C 34-51%2C 58-80%2C 119-141%2C153-175%2C 195-217 and 248-266;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	2687521	2687589	.	-	.	ID=id4364;Note=7 probable transmembrane helices predicted for YE2495 by TMHMM2.0 at aa 2-24%2C 34-51%2C 58-80%2C 119-141%2C153-175%2C 195-217 and 248-266;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	2687338	2687406	.	-	.	ID=id4364;Note=7 probable transmembrane helices predicted for YE2495 by TMHMM2.0 at aa 2-24%2C 34-51%2C 58-80%2C 119-141%2C153-175%2C 195-217 and 248-266;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	2687236	2687304	.	-	.	ID=id4364;Note=7 probable transmembrane helices predicted for YE2495 by TMHMM2.0 at aa 2-24%2C 34-51%2C 58-80%2C 119-141%2C153-175%2C 195-217 and 248-266;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	2687110	2687178	.	-	.	ID=id4364;Note=7 probable transmembrane helices predicted for YE2495 by TMHMM2.0 at aa 2-24%2C 34-51%2C 58-80%2C 119-141%2C153-175%2C 195-217 and 248-266;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	2686963	2687019	.	-	.	ID=id4364;Note=7 probable transmembrane helices predicted for YE2495 by TMHMM2.0 at aa 2-24%2C 34-51%2C 58-80%2C 119-141%2C153-175%2C 195-217 and 248-266;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	2687896	2688423	.	-	.	ID=gene2442;Name=YE2496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2496
AM286415.1	EMBL	CDS	2687896	2688423	.	-	0	ID=cds2370;Parent=gene2442;Dbxref=EnsemblGenomes-Gn:YE2496,EnsemblGenomes-Tr:CAL12539,InterPro:IPR018470,UniProtKB/TrEMBL:A1JSG3,NCBI_GP:CAL12539.1;Name=CAL12539.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12539.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2688349	2688405	.	-	.	ID=id4365;Note=1 probable transmembrane helix predicted for YE2496 by TMHMM2.0 at aa 7-25;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2688504	2690441	.	-	.	ID=gene2443;Name=YE2497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2497
AM286415.1	EMBL	CDS	2688504	2690441	.	-	0	ID=cds2371;Parent=gene2443;Dbxref=EnsemblGenomes-Gn:YE2497,EnsemblGenomes-Tr:CAL12540,GOA:A1JSG7,InterPro:IPR004923,UniProtKB/TrEMBL:A1JSG7,NCBI_GP:CAL12540.1;Name=CAL12540.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12540.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2689206	2689274	.	-	.	ID=id4366;Note=7 probable transmembrane helices predicted for YE2497 by TMHMM2.0 at aa 390-412%2C 425-444%2C 454-473%2C493-510%2C 530-552%2C 565-587 and 617-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	2689110	2689169	.	-	.	ID=id4366;Note=7 probable transmembrane helices predicted for YE2497 by TMHMM2.0 at aa 390-412%2C 425-444%2C 454-473%2C493-510%2C 530-552%2C 565-587 and 617-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	2689023	2689082	.	-	.	ID=id4366;Note=7 probable transmembrane helices predicted for YE2497 by TMHMM2.0 at aa 390-412%2C 425-444%2C 454-473%2C493-510%2C 530-552%2C 565-587 and 617-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	2688912	2688965	.	-	.	ID=id4366;Note=7 probable transmembrane helices predicted for YE2497 by TMHMM2.0 at aa 390-412%2C 425-444%2C 454-473%2C493-510%2C 530-552%2C 565-587 and 617-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	2688786	2688854	.	-	.	ID=id4366;Note=7 probable transmembrane helices predicted for YE2497 by TMHMM2.0 at aa 390-412%2C 425-444%2C 454-473%2C493-510%2C 530-552%2C 565-587 and 617-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	2688681	2688749	.	-	.	ID=id4366;Note=7 probable transmembrane helices predicted for YE2497 by TMHMM2.0 at aa 390-412%2C 425-444%2C 454-473%2C493-510%2C 530-552%2C 565-587 and 617-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	2688540	2688593	.	-	.	ID=id4366;Note=7 probable transmembrane helices predicted for YE2497 by TMHMM2.0 at aa 390-412%2C 425-444%2C 454-473%2C493-510%2C 530-552%2C 565-587 and 617-634;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	2688687	2688710	.	-	.	ID=id4367;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2688756	2689976	.	-	.	ID=id4368;Note=Pfam match to entry PF03239 FTR1%2C Iron permease FTR1 family%2C score 475.9%2C E-value 2.1e-140;gbkey=misc_feature;inference=protein motif:PFAM:PF03239
AM286415.1	EMBL	sequence_feature	2688810	2688842	.	-	.	ID=id4369;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2690615	2691133	.	+	.	ID=gene2444;Name=YE2498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2498
AM286415.1	EMBL	CDS	2690615	2691133	.	+	0	ID=cds2372;Parent=gene2444;Dbxref=EnsemblGenomes-Gn:YE2498,EnsemblGenomes-Tr:CAL12541,UniProtKB/TrEMBL:A1JSH2,NCBI_GP:CAL12541.1;Name=CAL12541.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12541.1;transl_table=11
AM286415.1	EMBL	gene	2691250	2692890	.	-	.	ID=gene2445;Name=YE2499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2499
AM286415.1	EMBL	CDS	2691250	2692890	.	-	0	ID=cds2373;Parent=gene2445;Dbxref=EnsemblGenomes-Gn:YE2499,EnsemblGenomes-Tr:CAL12542,GOA:A1JSH4,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JSH4,NCBI_GP:CAL12542.1;Name=CAL12542.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12542.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2692774	2692842	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	2692663	2692731	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	2692591	2692644	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	2692495	2692563	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	2692393	2692461	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	2692315	2692383	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	2692225	2692278	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	2692099	2692167	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	2691955	2692023	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	2691859	2691927	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	2691775	2691834	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	2691679	2691747	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	2691550	2691618	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	2691301	2691369	.	-	.	ID=id4370;Note=14 probable transmembrane helices predicted for YE2499 by TMHMM2.0 at aa 17-39%2C 54-76%2C 83-100%2C 110-132%2C144-166%2C 170-192%2C 205-222%2C 242-264%2C 290-312%2C 322-344%2C353-372%2C 382-404%2C 425-447 and 508-530;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	gene	2693001	2694008	.	-	.	ID=gene2446;Name=YE2500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2500
AM286415.1	EMBL	CDS	2693001	2694008	.	-	0	ID=cds2374;Parent=gene2446;Dbxref=EnsemblGenomes-Gn:YE2500,EnsemblGenomes-Tr:CAL12543,GOA:A1JSH9,InterPro:IPR012338,InterPro:IPR015868,UniProtKB/TrEMBL:A1JSH9,NCBI_GP:CAL12543.1;Name=CAL12543.1;gbkey=CDS;product=putative glutaminase;protein_id=CAL12543.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2693724	2693771	.	-	.	ID=id4371;Note=PS00146 Beta-lactamase class-A active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00146
AM286415.1	EMBL	gene	2694575	2695354	.	-	.	ID=gene2447;Name=YE2501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2501
AM286415.1	EMBL	CDS	2694575	2695354	.	-	0	ID=cds2375;Parent=gene2447;Dbxref=EnsemblGenomes-Gn:YE2501,EnsemblGenomes-Tr:CAL12544,GOA:A1JSI1,InterPro:IPR013022,InterPro:IPR026040,UniProtKB/TrEMBL:A1JSI1,NCBI_GP:CAL12544.1;Name=CAL12544.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12544.1;transl_table=11
AM286415.1	EMBL	gene	2695357	2695980	.	-	.	ID=gene2448;Name=YE2502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2502
AM286415.1	EMBL	CDS	2695357	2695980	.	-	0	ID=cds2376;Parent=gene2448;Dbxref=EnsemblGenomes-Gn:YE2502,EnsemblGenomes-Tr:CAL12545,InterPro:IPR001303,UniProtKB/TrEMBL:A1JSI3,NCBI_GP:CAL12545.1;Name=CAL12545.1;gbkey=CDS;product=putative class II aldolase-family protein;protein_id=CAL12545.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2695378	2695959	.	-	.	ID=id4372;Note=Pfam match to entry PF00596 Aldolase_II%2C Class II Aldolase and Adducin N-terminal domain%2C score 207.2%2CE-value 1.7e-59;gbkey=misc_feature;inference=protein motif:PFAM:PF00596
AM286415.1	EMBL	sequence_feature	2695477	2695500	.	-	.	ID=id4373;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2695669	2695701	.	-	.	ID=id4374;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2695977	2697284	.	-	.	ID=gene2449;Name=YE2503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2503
AM286415.1	EMBL	CDS	2695977	2697284	.	-	0	ID=cds2377;Parent=gene2449;Dbxref=EnsemblGenomes-Gn:YE2503,EnsemblGenomes-Tr:CAL12546,InterPro:IPR010737,UniProtKB/TrEMBL:A1JSI7,NCBI_GP:CAL12546.1;Name=CAL12546.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12546.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2697162	2697188	.	-	.	ID=id4375;Note=PS00572 Glycosyl hydrolases family 1 active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00572
AM286415.1	EMBL	gene	2697592	2698371	.	+	.	ID=gene2450;Name=YE2504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2504
AM286415.1	EMBL	CDS	2697592	2698371	.	+	0	ID=cds2378;Parent=gene2450;Dbxref=EnsemblGenomes-Gn:YE2504,EnsemblGenomes-Tr:CAL12547,GOA:A1JSI9,InterPro:IPR001034,InterPro:IPR011991,InterPro:IPR014036,InterPro:IPR018356,UniProtKB/TrEMBL:A1JSI9,NCBI_GP:CAL12547.1;Name=CAL12547.1;gbkey=CDS;product=probable deoR-family transcriptional regulatory protein;protein_id=CAL12547.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2697607	2698284	.	+	.	ID=id4376;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 220.2%2C E-value 2e-63;gbkey=misc_feature;inference=protein motif:PFAM:PF00455
AM286415.1	EMBL	sequence_feature	2697607	2697711	.	+	.	ID=id4377;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00894
AM286415.1	EMBL	sequence_feature	2697649	2697714	.	+	.	ID=id4378;Note=Predicted helix-turn-helix motif with score 1817.000%2C SD 5.38 at aa 20-41%2C sequence VSIAELTERLGVSHMTIRRDVQ;gbkey=misc_feature
AM286415.1	EMBL	gene	2698616	2700292	.	+	.	ID=gene2451;Name=YE2505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2505
AM286415.1	EMBL	CDS	2698616	2700292	.	+	0	ID=cds2379;Parent=gene2451;Dbxref=EnsemblGenomes-Gn:YE2505,EnsemblGenomes-Tr:CAL12548,GOA:A1JSJ2,InterPro:IPR000014,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR013767,InterPro:IPR016120,InterPro:IPR029150,InterPro:IPR029151,UniProtKB/TrEMBL:A1JSJ2,NCBI_GP:CAL12548.1;Name=CAL12548.1;Note=Similar to many two-component sensor kinases including: Escherichia coli%2C and Escherichia coli O157:H7 sensor protein DcuS or b4125 or z5727 or ecs5107 SWALL:DCUS_ECOLI (SWALL:P39272) (543 aa) fasta scores: E(): 7.6e-117%2C 56.76 38d in 532 aa and to Salmonella typhi two-component sensor kinase DcuS or Sty4502 SWALL:Q8Z1N4 (EMBL:AL627282) (543 aa) fasta scores: E(): 1.1e-119%2C59.39 38d in 527 aa. The two-component sensor regulator partner appears to be YE2506.;gbkey=CDS;inference=similar to sequence:UniProtKB:P39272;product=two-component system%2C sensor kinase;protein_id=CAL12548.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2699159	2699218	.	+	.	ID=id4379;Note=a probable transmembrane helix predicted for YE2505 by TMHMM2.0 at aa 182-201;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	2699276	2699377	.	+	.	ID=id4380;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 21.8%2C E-value 1.3e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	2699900	2700223	.	+	.	ID=id4381;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 94.6%2C E-value 1.3e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	2700285	2701004	.	+	.	ID=gene2452;Name=YE2506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2506
AM286415.1	EMBL	CDS	2700285	2701004	.	+	0	ID=cds2380;Parent=gene2452;Dbxref=EnsemblGenomes-Gn:YE2506,EnsemblGenomes-Tr:CAL12549,GOA:A1JSJ6,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR024187,UniProtKB/TrEMBL:A1JSJ6,NCBI_GP:CAL12549.1;Name=CAL12549.1;Note=Similar to many two-component sensor regulators including: Escherichia coli%2C and Escherichia coli O157:H7 transcriptional regulatory protein DcuR or b4124 or z5726 or ecs5106 SWALL:DCUR_ECOLI (SWALL:P39271) (239 aa) fasta scores: E(): 5.7e-52%2C 56.06 38d in 239 aa and to Salmonella typhimurium response regulator in two-component regulator of anaerobic fumarate respiration DcuR or Stm4303 SWALL:Q8ZKD9 (EMBL:AE008902) (239 aa) fasta scores: E(): 3.1e-52%2C 56.06 38d in 239 aa. The two-component sensor kinase partner appears to be YE2505.;gbkey=CDS;inference=similar to sequence:UniProtKB:P39271;product=two-component system%2C sensor regulator;protein_id=CAL12549.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2700318	2700659	.	+	.	ID=id4382;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 38.6%2C E-value 9e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	2700819	2700884	.	+	.	ID=id4383;Note=Predicted helix-turn-helix motif with score 1077.000%2C SD 2.86 at aa 168-189%2C sequence FSTEQMANAIGISRVSCRKYLI;gbkey=misc_feature
AM286415.1	EMBL	gene	2701116	2702474	.	-	.	ID=gene2453;Name=YE2507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2507
AM286415.1	EMBL	CDS	2701116	2702474	.	-	0	ID=cds2381;Parent=gene2453;Dbxref=EnsemblGenomes-Gn:YE2507,EnsemblGenomes-Tr:CAL12550,GOA:A1JSJ9,InterPro:IPR004679,UniProtKB/TrEMBL:A1JSJ9,NCBI_GP:CAL12550.1;Name=CAL12550.1;Note=Similar to many membrane transport proteins including: Streptococcus bovis L-malate permease MalP SWALL:Q53787 (EMBL:U35658) (441 aa) fasta scores: E(): 1.3e-78%2C 49.64 38d in 419 aa and to Klebsiella pneumoniae citrate-sodium symport CitS SWALL:CITN_KLEPN (SWALL:P31602) (446 aa) fasta scores: E(): 8e-38%2C 28.92 id in 439 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P31602;product=putative citrate/sodium-family symporter;protein_id=CAL12550.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2702295	2702354	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2702229	2702282	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2702136	2702204	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2702025	2702093	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2701938	2702006	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2701842	2701910	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2701737	2701805	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2701578	2701646	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2701503	2701571	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2701401	2701460	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2701314	2701382	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2701122	2701190	.	-	.	ID=id4384;Note=12 probable transmembrane helices predicted for YE2507 by TMHMM2.0 at aa 41-60%2C 65-82%2C 91-113%2C 128-150%2C157-179%2C 189-211%2C 224-246%2C 277-299%2C 302-324%2C 339-358%2C365-387 and 429-451;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2701125	2702387	.	-	.	ID=id4385;Note=Pfam match to entry PF03390 Na_citrate%2C Bacterial sodium:citrate symporter%2C score 619.5%2C E-value 1.3e-183;gbkey=misc_feature;inference=protein motif:PFAM:PF03390
AM286415.1	EMBL	gene	2703582	2705087	.	+	.	ID=gene2454;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=YE2508
AM286415.1	EMBL	CDS	2703582	2705087	.	+	0	ID=cds2382;Parent=gene2454;Dbxref=EnsemblGenomes-Gn:YE2508,EnsemblGenomes-Tr:CAL12551,GOA:A1JSK3,InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB/TrEMBL:A1JSK3,NCBI_GP:CAL12551.1;Name=CAL12551.1;gbkey=CDS;gene=ansP;product=L-asparagine permease;protein_id=CAL12551.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2703654	2704985	.	+	.	ID=id4386;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 654.7%2C E-value 3.1e-194;gbkey=misc_feature;gene=ansP;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	2703687	2703755	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2703768	2703836	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2703897	2703965	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2704008	2704076	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2704095	2704163	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2704230	2704298	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2704356	2704424	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2704482	2704550	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2704629	2704697	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2704707	2704775	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2704836	2704904	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2704914	2704982	.	+	.	ID=id4387;Note=12 probable transmembrane helices predicted for YE2508 by TMHMM2.0 at aa 36-58%2C 63-85%2C 106-128%2C 143-165%2C172-194%2C 217-239%2C 259-281%2C 301-323%2C 350-372%2C 376-398%2C419-441 and 445-467;gbkey=misc_feature;gene=ansP;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2703753	2703845	.	+	.	ID=id4388;Note=PS00218 Amino acid permeases signature.;gbkey=misc_feature;gene=ansP;inference=protein motif:Prosite:PS00218
AM286415.1	EMBL	gene	2705236	2705613	.	-	.	ID=gene2455;Name=YE2509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2509
AM286415.1	EMBL	CDS	2705236	2705613	.	-	0	ID=cds2383;Parent=gene2455;Dbxref=EnsemblGenomes-Gn:YE2509,EnsemblGenomes-Tr:CAL12552,InterPro:IPR007438,UniProtKB/TrEMBL:A1JSK9,NCBI_GP:CAL12552.1;Name=CAL12552.1;Note=Similar to many including: Brucella melitensis putative uroporphyrin-III C-methyltransferase bmeii0787 SWALL:Q8YBU9 (EMBL:AE009713) (116 aa) fasta scores: E(): 1.5e-15%2C 42.47 38d in 113 aa and to Rhizobium leguminosarum hypothetical 13.6 kDa protein SWALL:Q93EB8 (EMBL:AF361470) (115 aa) fasta scores: E(): 5e-14%2C 43.51 id in 108 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF361470;product=conserved hypothetical protein;protein_id=CAL12552.1;transl_table=11
AM286415.1	EMBL	gene	2705622	2705873	.	-	.	ID=gene2456;Name=YE2510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2510
AM286415.1	EMBL	CDS	2705622	2705873	.	-	0	ID=cds2384;Parent=gene2456;Dbxref=EnsemblGenomes-Gn:YE2510,EnsemblGenomes-Tr:CAL12553,GOA:A1JSL1,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JSL1,NCBI_GP:CAL12553.1;Name=CAL12553.1;Note=Weakly similar to the C-terminus of several proteins of undefined function including: Lactococcus lactis unknown protein YuiD or ll2008 SWALL:Q9CE40 (EMBL:AE006430) (152 aa) fasta scores: E(): 7.2e-13%2C 50.7 id in 71 aa and to Rhizobium meliloti hypothetical protein R02289 or smc01545 SWALL:Q92K29 (EMBL:AL591790) (114 aa) fasta scores: E(): 0.029%2C 30.76 38d in 65 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591790;product=hypothetical protein;protein_id=CAL12553.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2705688	2705873	.	-	.	ID=id4389;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 23.5%2C E-value 0.00033;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	2706166	2707182	.	+	.	ID=gene2457;Name=YE2511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2511
AM286415.1	EMBL	CDS	2706166	2707182	.	+	0	ID=cds2385;Parent=gene2457;Dbxref=EnsemblGenomes-Gn:YE2511,EnsemblGenomes-Tr:CAL12554,InterPro:IPR000600,InterPro:IPR011991,UniProtKB/TrEMBL:A1JSL4,NCBI_GP:CAL12554.1;Name=CAL12554.1;Note=Similar to several proteins of undefined function including: Listeria monocytogenes hypothetical protein Lmo0520 SWALL:Q8Y9K7 (EMBL:AL591975) (334 aa) fasta scores: E(): 7.6e-15%2C 23.78 38d in 328 aa. Also similar to the N-terminus of several regulatory proteins including: Caldicellulosiruptor sp. putative xylose repressor XylR SWALL:XYLR_CALSR (SWALL:P40981) (399 aa) fasta scores: E(): 3.5e-07%2C 26.25 38d in 278 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P40981;product=putative exported protein;protein_id=CAL12554.1;transl_table=11
AM286415.1	EMBL	gene	2707420	2708592	.	+	.	ID=gene2458;Name=YE2512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2512
AM286415.1	EMBL	CDS	2707420	2708592	.	+	0	ID=cds2386;Parent=gene2458;Dbxref=EnsemblGenomes-Gn:YE2512,EnsemblGenomes-Tr:CAL12555,GOA:A1JSL6,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JSL6,NCBI_GP:CAL12555.1;Name=CAL12555.1;Note=Similar to many membrane proteins including: Yersinia pestis putative membrane protein Ypo1221 SWALL:Q8ZGR2 (EMBL:AJ414147) (384 aa) fasta scores: E(): 1.2e-57%2C 43.75 38d in 368 aa and to Rhizobium loti transmembrane transport protein Mlr3825 SWALL:Q98FD4 (EMBL:AP003002) (391 aa) fasta scores: E(): 2.1e-36%2C 33.6 id in 369 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003002;product=putative inner membrane protein;protein_id=CAL12555.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2707480	2707533	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2707561	2707629	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2707648	2707716	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2707726	2707794	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2707831	2707899	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2707912	2707980	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2708041	2708109	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2708152	2708211	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2708248	2708307	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2708320	2708388	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2708425	2708493	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2708506	2708565	.	+	.	ID=id4390;Note=12 probable transmembrane helices predicted for YE2512 by TMHMM2.0 at aa 21-38%2C 48-70%2C 77-99%2C 103-125%2C138-160%2C 165-187%2C 208-230%2C 245-264%2C 277-296%2C 301-323%2C336-358 and 363-382;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	2708773	2709585	.	+	.	ID=gene2459;Name=YE2513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2513
AM286415.1	EMBL	CDS	2708773	2709585	.	+	0	ID=cds2387;Parent=gene2459;Dbxref=EnsemblGenomes-Gn:YE2513,EnsemblGenomes-Tr:CAL12556,GOA:A1JSL9,InterPro:IPR000150,InterPro:IPR006379,InterPro:IPR023214,UniProtKB/TrEMBL:A1JSL9,NCBI_GP:CAL12556.1;Name=CAL12556.1;Note=Highyl similar to several including: Salmonella typhimurium putative hydrolase Stm0867 SWALL:Q8ZQK7 (EMBL:AE008736) (271 aa) fasta scores: E(): 1.1e-54%2C53.53 38d in 269 aa and to Escherichia coli protein YbjI or b0844 SWALL:YBJI_ECOLI (SWALL:P75809) (271 aa) fasta scores: E(): 1.2e-54%2C 54.64 38d in 269 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75809;product=putative hydrolase;protein_id=CAL12556.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2708779	2709480	.	+	.	ID=id4391;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 30.4%2C E-value 2.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	2709409	2709477	.	+	.	ID=id4392;Note=PS01229 Hypothetical cof family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01229
AM286415.1	EMBL	gene	2709719	2710474	.	-	.	ID=gene2460;Name=yecC;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=YE2514
AM286415.1	EMBL	CDS	2709719	2710474	.	-	0	ID=cds2388;Parent=gene2460;Dbxref=EnsemblGenomes-Gn:YE2514,EnsemblGenomes-Tr:CAL12557,GOA:A1JSM1,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSM1,NCBI_GP:CAL12557.1;Name=CAL12557.1;gbkey=CDS;gene=yecC;product=putative amino-acid ABC transporter (ATP-binding protein);protein_id=CAL12557.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2709815	2710390	.	-	.	ID=id4393;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 243.1%2C E-value 2.6e-70;gbkey=misc_feature;gene=yecC;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2709998	2710042	.	-	.	ID=id4394;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=yecC;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2710346	2710369	.	-	.	ID=id4395;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=yecC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2710477	2711139	.	-	.	ID=gene2461;Name=yecS;gbkey=Gene;gene=yecS;gene_biotype=protein_coding;locus_tag=YE2515
AM286415.1	EMBL	CDS	2710477	2711139	.	-	0	ID=cds2389;Parent=gene2461;Dbxref=EnsemblGenomes-Gn:YE2515,EnsemblGenomes-Tr:CAL12558,GOA:A1JSM6,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JSM6,NCBI_GP:CAL12558.1;Name=CAL12558.1;gbkey=CDS;gene=yecS;product=putative amino-acid ABC transporter (permease);protein_id=CAL12558.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2711014	2711082	.	-	.	ID=id4396;Note=3 probable transmembrane helices predicted for YE2515 by TMHMM2.0 at aa 20-42%2C 54-76 and 185-207;gbkey=misc_feature;gene=yecS;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	2710912	2710980	.	-	.	ID=id4396;Note=3 probable transmembrane helices predicted for YE2515 by TMHMM2.0 at aa 20-42%2C 54-76 and 185-207;gbkey=misc_feature;gene=yecS;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	2710519	2710587	.	-	.	ID=id4396;Note=3 probable transmembrane helices predicted for YE2515 by TMHMM2.0 at aa 20-42%2C 54-76 and 185-207;gbkey=misc_feature;gene=yecS;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	2710570	2710812	.	-	.	ID=id4397;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 66.7%2C E-value 3.2e-17;gbkey=misc_feature;gene=yecS;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	2710723	2710809	.	-	.	ID=id4398;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=yecS;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	2711139	2711939	.	-	.	ID=gene2462;Name=fliY;gbkey=Gene;gene=fliY;gene_biotype=protein_coding;locus_tag=YE2516
AM286415.1	EMBL	CDS	2711139	2711939	.	-	0	ID=cds2390;Parent=gene2462;Dbxref=EnsemblGenomes-Gn:YE2516,EnsemblGenomes-Tr:CAL12559,GOA:A1JSN0,InterPro:IPR001638,InterPro:IPR018313,UniProtKB/TrEMBL:A1JSN0,NCBI_GP:CAL12559.1;Name=CAL12559.1;gbkey=CDS;gene=fliY;product=putative cystine-binding periplasmic protein;protein_id=CAL12559.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2711154	2711813	.	-	.	ID=id4399;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 324.9%2C E-value 6e-95;gbkey=misc_feature;gene=fliY;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	sequence_feature	2711706	2711747	.	-	.	ID=id4400;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;gbkey=misc_feature;gene=fliY;inference=protein motif:Prosite:PS01039
AM286415.1	EMBL	gene	2712058	2713050	.	-	.	ID=gene2463;Name=YedO;gbkey=Gene;gene=YedO;gene_biotype=protein_coding;locus_tag=YE2517
AM286415.1	EMBL	CDS	2712058	2713050	.	-	0	ID=cds2391;Parent=gene2463;Dbxref=EnsemblGenomes-Gn:YE2517,EnsemblGenomes-Tr:CAL12560,GOA:A1JSN4,InterPro:IPR001926,InterPro:IPR005966,InterPro:IPR023702,InterPro:IPR027278,NCBI_GP:CAL12560.1;Name=CAL12560.1;gbkey=CDS;gene=YedO;product=putative deaminase;protein_id=CAL12560.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2712094	2713014	.	-	.	ID=id4401;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score -13.9%2CE-value 3.4e-07;gbkey=misc_feature;gene=YedO;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	sequence_feature	2712505	2712636	.	-	.	ID=id4402;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=YedO;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	gene	2713429	2713938	.	-	.	ID=gene2464;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=YE2518
AM286415.1	EMBL	CDS	2713429	2713938	.	-	0	ID=cds2392;Parent=gene2464;Dbxref=EnsemblGenomes-Gn:YE2518,EnsemblGenomes-Tr:CAL12561,GOA:A1JSP0,InterPro:IPR004107,InterPro:IPR008949,InterPro:IPR022523,UniProtKB/TrEMBL:A1JSP0,NCBI_GP:CAL12561.1;Name=CAL12561.1;gbkey=CDS;gene=fliZ;product=putative alternative sigma factor regulatory protein;protein_id=CAL12561.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2713435	2713680	.	-	.	ID=id4403;Note=Pfam match to entry PF02899 Phage_integr_N%2C Phage integrase%2C N-terminal SAM-like domain%2C score 22.6%2CE-value 0.00026;gbkey=misc_feature;gene=fliZ;inference=protein motif:PFAM:PF02899
AM286415.1	EMBL	sequence_feature	2713849	2713866	.	-	.	ID=id4404;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=fliZ;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	2713994	2714716	.	-	.	ID=gene2465;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;gene_synonym=flaD;locus_tag=YE2519
AM286415.1	EMBL	CDS	2713994	2714716	.	-	0	ID=cds2393;Parent=gene2465;Dbxref=EnsemblGenomes-Gn:YE2519,EnsemblGenomes-Tr:CAL12562,GOA:A1JSP4,InterPro:IPR000943,InterPro:IPR007624,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR011991,InterPro:IPR012845,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,InterPro:IPR028617,UniProtKB/TrEMBL:A1JSP4,NCBI_GP:CAL12562.1;Name=CAL12562.1;gbkey=CDS;gene=fliA;product=RNA polymerase sigma factor for flagellar operon;protein_id=CAL12562.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2714021	2714101	.	-	.	ID=id4405;Note=PS00716 Sigma-70 factors family signature 2.;gbkey=misc_feature;gene=fliA;inference=protein motif:Prosite:PS00716
AM286415.1	EMBL	sequence_feature	2714039	2714104	.	-	.	ID=id4406;Note=Predicted helix-turn-helix motif with score 1242.000%2C SD 3.42 at aa 205-226%2C sequence LNLKEIGAVLEVGESRVSQLHS;gbkey=misc_feature;gene=fliA
AM286415.1	EMBL	sequence_feature	2714549	2714590	.	-	.	ID=id4407;Note=PS00715 Sigma-70 factors family signature 1.;gbkey=misc_feature;gene=fliA;inference=protein motif:Prosite:PS00715
AM286415.1	EMBL	gene	2714907	2716112	.	-	.	ID=gene2466;Name=fliB;gbkey=Gene;gene=fliB;gene_biotype=protein_coding;locus_tag=YE2520
AM286415.1	EMBL	CDS	2714907	2716112	.	-	0	ID=cds2394;Parent=gene2466;Dbxref=EnsemblGenomes-Gn:YE2520,EnsemblGenomes-Tr:CAL12563,GOA:A1JSP9,InterPro:IPR020193,UniProtKB/TrEMBL:A1JSP9,NCBI_GP:CAL12563.1;Name=CAL12563.1;Note=Highly similar to Salmonella typhimurium lysine-N-methylase FliB or Stm1958 SWALL:FLIB_SALTY (SWALL:Q56106) (401 aa) fasta scores: E(): 2.1e-53%2C 36.9 id in 401 aa and to Salmonella cholerae-suis lysine-N-methylase FliB or FliU SWALL:FLIB_SALCH (SWALL:Q9KJV4) (401 aa) fasta scores: E(): 2.8e-53%2C 36.65 id in 401 aa;gbkey=CDS;gene=fliB;inference=similar to sequence:UniProtKB:Q9KJV4;product=flagellin lysine-N-methylase;protein_id=CAL12563.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2716047	2716079	.	-	.	ID=id4408;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=fliB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	repeat_region	2716259	2717419	.	+	.	ID=id4409;Note=partial repeat sequence repeated at locations 2717420..2718709 and 2718710..2720008;gbkey=repeat_region
AM286415.1	EMBL	gene	2716260	2717405	.	-	.	ID=gene2467;Name=fliC2;gbkey=Gene;gene=fliC2;gene_biotype=protein_coding;locus_tag=YE2521
AM286415.1	EMBL	CDS	2716260	2717405	.	-	0	ID=cds2395;Parent=gene2467;Dbxref=EnsemblGenomes-Gn:YE2521,EnsemblGenomes-Tr:CAL12564,GOA:A1JSQ1,InterPro:IPR001029,InterPro:IPR001492,UniProtKB/TrEMBL:A1JSQ1,NCBI_GP:CAL12564.1;Name=CAL12564.1;Note=Similar to the products of many genes encoding flagellin: Salmonella budapest flagellin FliC SWALL:FLIC_SALBU (SWALL:Q06969) (504 aa) fasta scores: E(): 7.4e-35%2C 45.25 38d in 506 aa and to Pseudomonas aeruginosa flagellin fliC SWALL:O86265 (EMBL:L81146) (387 aa) fasta scores: E(): 5.9e-42%2C 43.4 38d in 394 aa. The product of this CDS is also highly similar to the product of the genes YE2523 83.812 38d in 383 aa and YE2522 83.727 38d in 381 aa.;gbkey=CDS;gene=fliC2;inference=similar to sequence:UniProtKB:Q06969;product=flagellin;protein_id=CAL12564.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2716329	2716544	.	-	.	ID=id4410;Note=Pfam match to entry PF00700 Flagellin_C%2C Bacterial flagellin C-terminus%2C score 128.4%2C E-value 8.3e-36;gbkey=misc_feature;gene=fliC2;inference=protein motif:PFAM:PF00700
AM286415.1	EMBL	sequence_feature	2716890	2717324	.	-	.	ID=id4411;Note=Pfam match to entry PF00669 Flagellin_N%2C Bacterial flagellin N-terminus%2C score 241.6%2C E-value 7.3e-70;gbkey=misc_feature;gene=fliC2;inference=protein motif:PFAM:PF00669
AM286415.1	EMBL	repeat_region	2717420	2718709	.	+	.	ID=id4412;Note=partial repeat sequence repeated at locations 2716259..2717419 and 2718710..2720008;gbkey=repeat_region
AM286415.1	EMBL	gene	2717595	2718695	.	-	.	ID=gene2468;Name=fliC;gbkey=Gene;gene=fliC;gene_biotype=protein_coding;gene_synonym=flaF,hag;locus_tag=YE2522
AM286415.1	EMBL	CDS	2717595	2718695	.	-	0	ID=cds2396;Parent=gene2468;Dbxref=EnsemblGenomes-Gn:YE2522,EnsemblGenomes-Tr:CAL12565,GOA:A1JSQ5,InterPro:IPR001029,InterPro:IPR001492,UniProtKB/TrEMBL:A1JSQ5,NCBI_GP:CAL12565.1;Name=CAL12565.1;Note=The product of this CDS is also highly similar to the product of the genes YE2521 83.727 38d in 381 aa and YE2523 92.683 38d in 369 aa. /fasta_file%3Dfasta;gbkey=CDS;gene=fliC;product=thermoregulated motility protein;protein_id=CAL12565.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2717664	2717879	.	-	.	ID=id4413;Note=Pfam match to entry PF00700 Flagellin_C%2C Bacterial flagellin C-terminus%2C score 128.4%2C E-value 8.6e-36;gbkey=misc_feature;gene=fliC;inference=protein motif:PFAM:PF00700
AM286415.1	EMBL	sequence_feature	2718180	2718614	.	-	.	ID=id4414;Note=Pfam match to entry PF00669 Flagellin_N%2C Bacterial flagellin N-terminus%2C score 242.7%2C E-value 3.4e-70;gbkey=misc_feature;gene=fliC;inference=protein motif:PFAM:PF00669
AM286415.1	EMBL	repeat_region	2718710	2720008	.	+	.	ID=id4415;Note=partial repeat sequence repeated at locations 2716259..2717419 and 2717420..2718709;gbkey=repeat_region
AM286415.1	EMBL	gene	2718885	2719994	.	-	.	ID=gene2469;Name=fliC3;gbkey=Gene;gene=fliC3;gene_biotype=protein_coding;locus_tag=YE2523
AM286415.1	EMBL	CDS	2718885	2719994	.	-	0	ID=cds2397;Parent=gene2469;Dbxref=EnsemblGenomes-Gn:YE2523,EnsemblGenomes-Tr:CAL12566,GOA:A1JSQ9,InterPro:IPR001029,InterPro:IPR001492,UniProtKB/TrEMBL:A1JSQ9,NCBI_GP:CAL12566.1;Name=CAL12566.1;Note=Similar to Proteus mirabilis flagellin 2 FliC2 SWALL:FLC2_PROMI (SWALL:P42273) (367 aa) fasta scores: E(): 1.2e-53%2C 55.2 38d in 375 aa%2C Yersinia enterocolitica thermoregulated motility protein SWALL:Q56912 (EMBL:L33468) (364 aa) fasta scores: E(): 9e-96%2C 88.34 38d in 369 aa and to Salmonella oranienberg flagellin FliC SWALL:FLIC_SALON (SWALL:Q06974) (507 aa) fasta scores: E(): 1.8e-34%2C 44.99 38d in 509 aa. The product of this CDS is also highly similar to the product of the genes YE2521 83.812 38d in 383 aa and YE2522 92.683 0d in 369 aa.;gbkey=CDS;gene=fliC3;inference=similar to sequence:UniProtKB:Q06974;product=flagellin;protein_id=CAL12566.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2718954	2719169	.	-	.	ID=id4416;Note=Pfam match to entry PF00700 Flagellin_C%2C Bacterial flagellin C-terminus%2C score 130.3%2C E-value 2.3e-36;gbkey=misc_feature;gene=fliC3;inference=protein motif:PFAM:PF00700
AM286415.1	EMBL	sequence_feature	2719479	2719913	.	-	.	ID=id4417;Note=Pfam match to entry PF00669 Flagellin_N%2C Bacterial flagellin N-terminus%2C score 242.7%2C E-value 3.4e-70;gbkey=misc_feature;gene=fliC3;inference=protein motif:PFAM:PF00669
AM286415.1	EMBL	gene	2720258	2721658	.	+	.	ID=gene2470;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;gene_synonym=flaV,flbC;locus_tag=YE2524
AM286415.1	EMBL	CDS	2720258	2721658	.	+	0	ID=cds2398;Parent=gene2470;Dbxref=EnsemblGenomes-Gn:YE2524,EnsemblGenomes-Tr:CAL12567,GOA:A1JSR2,InterPro:IPR003481,InterPro:IPR010809,InterPro:IPR010810,UniProtKB/TrEMBL:A1JSR2,NCBI_GP:CAL12567.1;Name=CAL12567.1;gbkey=CDS;gene=fliD;product=flagellar hook-associated protein 2;protein_id=CAL12567.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2720285	2721622	.	+	.	ID=id4418;Note=Pfam match to entry PF02465 FliD%2C Flagellar hook-associated protein 2%2C score 480.3%2C E-value 1e-141;gbkey=misc_feature;gene=fliD;inference=protein motif:PFAM:PF02465
AM286415.1	EMBL	gene	2721669	2722067	.	+	.	ID=gene2471;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=YE2525
AM286415.1	EMBL	CDS	2721669	2722067	.	+	0	ID=cds2399;Parent=gene2471;Dbxref=EnsemblGenomes-Gn:YE2525,EnsemblGenomes-Tr:CAL12568,GOA:A1JSR5,InterPro:IPR003713,UniProtKB/TrEMBL:A1JSR5,NCBI_GP:CAL12568.1;Name=CAL12568.1;gbkey=CDS;gene=fliS;product=flagellar protein FliS;protein_id=CAL12568.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2721672	2722055	.	+	.	ID=id4419;Note=Pfam match to entry PF02561 FliS%2C Flagellar protein FliS%2C score 158.0%2C E-value 1e-44;gbkey=misc_feature;gene=fliS;inference=protein motif:PFAM:PF02561
AM286415.1	EMBL	gene	2722079	2722441	.	+	.	ID=gene2472;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=YE2526
AM286415.1	EMBL	CDS	2722079	2722441	.	+	0	ID=cds2400;Parent=gene2472;Dbxref=EnsemblGenomes-Gn:YE2526,EnsemblGenomes-Tr:CAL12569,GOA:A1JSR8,InterPro:IPR008622,PDB:3NKZ,NCBI_GP:CAL12569.1;Name=CAL12569.1;gbkey=CDS;gene=fliT;product=flagella protein;protein_id=CAL12569.1;transl_table=11
AM286415.1	EMBL	gene	2722716	2723585	.	+	.	ID=gene2473;Name=YE2527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2527
AM286415.1	EMBL	CDS	2722716	2723585	.	+	0	ID=cds2401;Parent=gene2473;Dbxref=EnsemblGenomes-Gn:YE2527,EnsemblGenomes-Tr:CAL12570,GOA:A1JSS0,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR020449,UniProtKB/TrEMBL:A1JSS0,NCBI_GP:CAL12570.1;Name=CAL12570.1;gbkey=CDS;product=putative AraC-family transcriptional regulatory protein;protein_id=CAL12570.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2723229	2723363	.	+	.	ID=id4420;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 4.2%2C E-value 0.94;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	2723265	2723330	.	+	.	ID=id4421;Note=Predicted helix-turn-helix motif with score 1241.000%2C SD 3.41 at aa 184-205%2C sequence WSAAEVADHMAMSEVVLRRKLA;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	2723370	2723498	.	+	.	ID=id4422;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	2723382	2723513	.	+	.	ID=id4423;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 38.5%2C E-value 9.7e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	2723915	2726869	.	+	.	ID=gene2474;Name=YE2528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2528
AM286415.1	EMBL	CDS	2723915	2726869	.	+	0	ID=cds2402;Parent=gene2474;Dbxref=EnsemblGenomes-Gn:YE2528,EnsemblGenomes-Tr:CAL12571,GOA:A1JSS5,InterPro:IPR003018,InterPro:IPR003607,InterPro:IPR003660,InterPro:IPR006674,InterPro:IPR029016,UniProtKB/TrEMBL:A1JSS5,NCBI_GP:CAL12571.1;Name=CAL12571.1;Note=Similar to Vibrio cholerae chemotactic transducer-related protein Vca0895 SWALL:Q9KL53 (EMBL:AE004417) (981 aa) fasta scores: E(): 2.7e-81%2C37.07 38d in 990 aa. Similar in the N-terminus to Rhizobium meliloti adenylate cyclase 1 Cya1 or CyaA or r00259 or smc00339 SWALL:CYA1_RHIME (SWALL:P19485) (665 aa) fasta scores: E(): 2.5e-11%2C 22.62 38d in 411 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P19485;product=putative chemotaxis protein;protein_id=CAL12571.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2723957	2724025	.	+	.	ID=id4424;Note=2 probable transmembrane helices predicted for YE2528 by TMHMM2.0 at aa 15-37 and 352-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2724968	2725021	.	+	.	ID=id4424;Note=2 probable transmembrane helices predicted for YE2528 by TMHMM2.0 at aa 15-37 and 352-369;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2724962	2725174	.	+	.	ID=id4425;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 23.6%2C E-value 0.00031;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	2726411	2726629	.	+	.	ID=id4426;Note=Pfam match to entry PF01966 HD%2C HD domain%2C score 23.4%2C E-value 6e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01966
AM286415.1	EMBL	gene	2726956	2727558	.	+	.	ID=gene2475;Name=YE2529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2529
AM286415.1	EMBL	CDS	2726956	2727558	.	+	0	ID=cds2403;Parent=gene2475;Dbxref=EnsemblGenomes-Gn:YE2529,EnsemblGenomes-Tr:CAL12572,GOA:A1JSS9,InterPro:IPR003265,InterPro:IPR003583,InterPro:IPR011257,InterPro:IPR023170,UniProtKB/TrEMBL:A1JSS9,NCBI_GP:CAL12572.1;Name=CAL12572.1;gbkey=CDS;product=putative glycosidase;protein_id=CAL12572.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2727016	2727045	.	+	.	ID=id4427;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	2727070	2727555	.	+	.	ID=id4428;Note=Pfam match to entry PF00730 HhH-GPD%2C HhH-GPD superfamily base excision DNA repair protein%2C score -48.5%2C E-value 0.036;gbkey=misc_feature;inference=protein motif:PFAM:PF00730
AM286415.1	EMBL	gene	2727781	2727957	.	+	.	ID=gene2476;Name=YE2530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2530
AM286415.1	EMBL	CDS	2727781	2727957	.	+	0	ID=cds2404;Parent=gene2476;Dbxref=EnsemblGenomes-Gn:YE2530,EnsemblGenomes-Tr:CAL12573,InterPro:IPR010391,UniProtKB/TrEMBL:A1JST2,NCBI_GP:CAL12573.1;Name=CAL12573.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 DNA-damage-inducible protein I DinI or b1061 or z1698 or ecs1439 SWALL:DINI_ECOLI (SWALL:Q47143) (81 aa) fasta scores: E(): 1.6e-07%2C 54.54 38d in 55 aa and Serratia marcescens DNA-damage-inducible protein I DinI SWALL:DINI_SERMA (SWALL:Q9S3S0) (79 aa) fasta scores: E(): 2.3e-10%2C 58.92 38d in 56 aa. Notice the differing N-termini of the other database hits;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9S3S0;product=putative DNA-damage-inducible protein;protein_id=CAL12573.1;transl_table=11
AM286415.1	EMBL	gene	2728425	2729084	.	+	.	ID=gene2477;Name=YE2531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2531
AM286415.1	EMBL	CDS	2728425	2729084	.	+	0	ID=cds2405;Parent=gene2477;Dbxref=EnsemblGenomes-Gn:YE2531,EnsemblGenomes-Tr:CAL12574,UniProtKB/TrEMBL:A1JST4,NCBI_GP:CAL12574.1;Name=CAL12574.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12574.1;transl_table=11
AM286415.1	EMBL	gene	2729612	2729827	.	-	.	ID=gene2478;Name=YE2533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2533
AM286415.1	EMBL	CDS	2729612	2729827	.	-	0	ID=cds2406;Parent=gene2478;Dbxref=EnsemblGenomes-Gn:YE2533,EnsemblGenomes-Tr:CAL12575,UniProtKB/TrEMBL:A1JST5,NCBI_GP:CAL12575.1;Name=CAL12575.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL12575.1;transl_table=11
AM286415.1	EMBL	pseudogene	2729830	2729901	.	+	.	ID=gene2479;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2535;part=1/4;pseudo=true
AM286415.1	EMBL	pseudogene	2729905	2729970	.	+	.	ID=gene2479;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2535;part=2/4;pseudo=true
AM286415.1	EMBL	pseudogene	2729974	2730036	.	+	.	ID=gene2479;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2535;part=3/4;pseudo=true
AM286415.1	EMBL	pseudogene	2730038	2730280	.	+	.	ID=gene2479;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2535;part=4/4;pseudo=true
AM286415.1	EMBL	CDS	2729830	2729901	.	+	0	ID=cds2407;Parent=gene2479;Note=Similar to Yersinia enterocolitica IS1329 transposase B Trp1329B SWALL:Q9X9I3 (EMBL:AJ132945) (249 aa) fasta scores: E(): 1.2e-50%2C 88.23 38d in 153 aa and to Erwinia amylovora TnpA SWALL:Q9F7Z5 (EMBL:AF264951) (269 aa) fasta scores: E(): 9.9e-22%2C 47.97 38d in 148 aa. Note this CDS contains multiple frameshifts and point mutations;gbkey=CDS;gene=tnpB;inference=similar to sequence:INSDC:AJ132945;product=IS1329 transposase B (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2729905	2729970	.	+	0	ID=cds2407;Parent=gene2479;Note=Similar to Yersinia enterocolitica IS1329 transposase B Trp1329B SWALL:Q9X9I3 (EMBL:AJ132945) (249 aa) fasta scores: E(): 1.2e-50%2C 88.23 38d in 153 aa and to Erwinia amylovora TnpA SWALL:Q9F7Z5 (EMBL:AF264951) (269 aa) fasta scores: E(): 9.9e-22%2C 47.97 38d in 148 aa. Note this CDS contains multiple frameshifts and point mutations;gbkey=CDS;gene=tnpB;inference=similar to sequence:INSDC:AJ132945;product=IS1329 transposase B (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2729974	2730036	.	+	0	ID=cds2407;Parent=gene2479;Note=Similar to Yersinia enterocolitica IS1329 transposase B Trp1329B SWALL:Q9X9I3 (EMBL:AJ132945) (249 aa) fasta scores: E(): 1.2e-50%2C 88.23 38d in 153 aa and to Erwinia amylovora TnpA SWALL:Q9F7Z5 (EMBL:AF264951) (269 aa) fasta scores: E(): 9.9e-22%2C 47.97 38d in 148 aa. Note this CDS contains multiple frameshifts and point mutations;gbkey=CDS;gene=tnpB;inference=similar to sequence:INSDC:AJ132945;product=IS1329 transposase B (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2730038	2730280	.	+	0	ID=cds2407;Parent=gene2479;Note=Similar to Yersinia enterocolitica IS1329 transposase B Trp1329B SWALL:Q9X9I3 (EMBL:AJ132945) (249 aa) fasta scores: E(): 1.2e-50%2C 88.23 38d in 153 aa and to Erwinia amylovora TnpA SWALL:Q9F7Z5 (EMBL:AF264951) (269 aa) fasta scores: E(): 9.9e-22%2C 47.97 38d in 148 aa. Note this CDS contains multiple frameshifts and point mutations;gbkey=CDS;gene=tnpB;inference=similar to sequence:INSDC:AJ132945;product=IS1329 transposase B (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	repeat_region	2729842	2730315	.	+	.	ID=id4429;Note=A fragment of a degenerate IS1329 insertion sequence element;gbkey=repeat_region
AM286415.1	EMBL	sequence_feature	2730035	2730259	.	+	.	ID=id4430;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 35.8%2C E-value 2.5e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	2730477	2730788	.	-	.	ID=gene2480;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;gene_synonym=fla AI,flaN;locus_tag=YE2536
AM286415.1	EMBL	CDS	2730477	2730788	.	-	0	ID=cds2408;Parent=gene2480;Dbxref=EnsemblGenomes-Gn:YE2536,EnsemblGenomes-Tr:CAL12577,GOA:A1JSU2,InterPro:IPR001624,NCBI_GP:CAL12577.1;Name=CAL12577.1;gbkey=CDS;gene=fliE;product=flagellar hook-basal body complex protein FliE;protein_id=CAL12577.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2730480	2730779	.	-	.	ID=id4431;Note=Pfam match to entry PF02049 FliE%2C Flagellar hook-basal body complex protein FliE%2C score 102.4%2CE-value 5.6e-28;gbkey=misc_feature;gene=fliE;inference=protein motif:PFAM:PF02049
AM286415.1	EMBL	gene	2731117	2732817	.	+	.	ID=gene2481;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;gene_synonym=fla AII.1,fla BI;locus_tag=YE2537
AM286415.1	EMBL	CDS	2731117	2732817	.	+	0	ID=cds2409;Parent=gene2481;Dbxref=EnsemblGenomes-Gn:YE2537,EnsemblGenomes-Tr:CAL12578,GOA:A1JSU5,InterPro:IPR000067,InterPro:IPR006182,InterPro:IPR013556,UniProtKB/TrEMBL:A1JSU5,NCBI_GP:CAL12578.1;Name=CAL12578.1;gbkey=CDS;gene=fliF;product=flagellar M-ring protein;protein_id=CAL12578.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2731180	2731806	.	+	.	ID=id4432;Note=Pfam match to entry PF01514 YscJ_FliF%2C Secretory protein of YscJ/FliF family%2C score 297.0%2C E-value 1.6e-86;gbkey=misc_feature;gene=fliF;inference=protein motif:PFAM:PF01514
AM286415.1	EMBL	sequence_feature	2731198	2731257	.	+	.	ID=id4433;Note=1 probable transmembrane helix predicted for YE2537 by TMHMM2.0 at aa 28-47;gbkey=misc_feature;gene=fliF;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2732814	2733806	.	+	.	ID=gene2482;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;gene_synonym=fla AII.2,fla BII;locus_tag=YE2538
AM286415.1	EMBL	CDS	2732814	2733806	.	+	0	ID=cds2410;Parent=gene2482;Dbxref=EnsemblGenomes-Gn:YE2538,EnsemblGenomes-Tr:CAL12579,GOA:A1JSU9,InterPro:IPR000090,InterPro:IPR011002,InterPro:IPR028263,UniProtKB/TrEMBL:A1JSU9,NCBI_GP:CAL12579.1;Name=CAL12579.1;gbkey=CDS;gene=fliG;product=flagellar motor switch protein FliG;protein_id=CAL12579.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2733453	2733782	.	+	.	ID=id4434;Note=Pfam match to entry PF01706 FliG-C%2C FliG C-terminal domain%2C score 195.1%2C E-value 6.9e-56;gbkey=misc_feature;gene=fliG;inference=protein motif:PFAM:PF01706
AM286415.1	EMBL	gene	2733799	2734521	.	+	.	ID=gene2483;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=YE2539
AM286415.1	EMBL	CDS	2733799	2734521	.	+	0	ID=cds2411;Parent=gene2483;Dbxref=EnsemblGenomes-Gn:YE2539,EnsemblGenomes-Tr:CAL12580,GOA:A1JSV2,InterPro:IPR000563,InterPro:IPR018035,UniProtKB/TrEMBL:A1JSV2,NCBI_GP:CAL12580.1;Name=CAL12580.1;Note=Highly similar to Escherichia coli flagellar assembly protein FliH or fla bIII or fla aII.3 or b1940 SWALL:FLIH_ECOLI (SWALL:P31068) (228 aa) fasta scores: E(): 1.7e-44%2C 57.74 38d in 239 aa and to Yersinia pestis flagellar assembly protein FliH or ypo1828 SWALL:Q8ZF88 (EMBL:AJ414150) (238 aa) fasta scores: E(): 1.3e-74%2C84.16 38d in 240 aa;gbkey=CDS;gene=fliH;inference=similar to sequence:UniProtKB:P31068;product=flagellar assembly protein;protein_id=CAL12580.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2733964	2734494	.	+	.	ID=id4435;Note=Pfam match to entry PF02108 FliH%2C Flagellar assembly protein FliH%2C score 167.6%2C E-value 1.3e-47;gbkey=misc_feature;gene=fliH;inference=protein motif:PFAM:PF02108
AM286415.1	EMBL	gene	2734554	2735885	.	+	.	ID=gene2484;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;gene_synonym=fla AIII,flaC;locus_tag=YE2540
AM286415.1	EMBL	CDS	2734554	2735885	.	+	0	ID=cds2412;Parent=gene2484;Dbxref=EnsemblGenomes-Gn:YE2540,EnsemblGenomes-Tr:CAL12581,GOA:A1JSV5,InterPro:IPR000194,InterPro:IPR003593,InterPro:IPR005714,InterPro:IPR020003,InterPro:IPR020005,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSV5,NCBI_GP:CAL12581.1;Name=CAL12581.1;gbkey=CDS;gene=fliI;product=flagellum-specific ATP synthase;protein_id=CAL12581.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2734839	2735654	.	+	.	ID=id4436;Note=Pfam match to entry PF00006 ATP-synt_ab%2C ATP synthase alpha/beta family%2C nucleotide-binding domain %2Cscore 459.7%2C E-value 1.6e-135;gbkey=misc_feature;gene=fliI;inference=protein motif:PFAM:PF00006
AM286415.1	EMBL	sequence_feature	2735061	2735084	.	+	.	ID=id4437;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=fliI;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2735607	2735636	.	+	.	ID=id4438;Note=PS00152 ATP synthase alpha and beta subunits signature.;gbkey=misc_feature;gene=fliI;inference=protein motif:Prosite:PS00152
AM286415.1	EMBL	gene	2735975	2736421	.	+	.	ID=gene2485;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;gene_synonym=flaO,flaS;locus_tag=YE2541
AM286415.1	EMBL	CDS	2735975	2736421	.	+	0	ID=cds2413;Parent=gene2485;Dbxref=EnsemblGenomes-Gn:YE2541,EnsemblGenomes-Tr:CAL12582,GOA:A1JSV8,InterPro:IPR012823,InterPro:IPR018006,UniProtKB/TrEMBL:A1JSV8,NCBI_GP:CAL12582.1;Name=CAL12582.1;gbkey=CDS;gene=fliJ;product=flagellar protein FliJ;protein_id=CAL12582.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2735975	2736415	.	+	.	ID=id4439;Note=Pfam match to entry PF02050 FliJ%2C Flagellar FliJ protein%2C score 200.8%2C E-value 1.3e-57;gbkey=misc_feature;gene=fliJ;inference=protein motif:PFAM:PF02050
AM286415.1	EMBL	gene	2736550	2737776	.	+	.	ID=gene2486;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=YE2542
AM286415.1	EMBL	CDS	2736550	2737776	.	+	0	ID=cds2414;Parent=gene2486;Dbxref=EnsemblGenomes-Gn:YE2542,EnsemblGenomes-Tr:CAL12583,GOA:A1JSW1,InterPro:IPR001635,InterPro:IPR021136,UniProtKB/TrEMBL:A1JSW1,NCBI_GP:CAL12583.1;Name=CAL12583.1;gbkey=CDS;gene=fliK;product=flagellar hook-length control protein FliK;protein_id=CAL12583.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2736583	2737773	.	+	.	ID=id4440;Note=Pfam match to entry PF02120 Flg_hook%2C Flagellar hook-length control protein%2C score 83.0%2C E-value 4e-22;gbkey=misc_feature;gene=fliK;inference=protein motif:PFAM:PF02120
AM286415.1	EMBL	sequence_feature	2736622	2736645	.	+	.	ID=id4441;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=fliK;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2737967	2738437	.	+	.	ID=gene2487;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;gene_synonym=cheC1,fla AI,fla QI;locus_tag=YE2543
AM286415.1	EMBL	CDS	2737967	2738437	.	+	0	ID=cds2415;Parent=gene2487;Dbxref=EnsemblGenomes-Gn:YE2543,EnsemblGenomes-Tr:CAL12584,GOA:A1JSW4,InterPro:IPR005503,UniProtKB/TrEMBL:A1JSW4,NCBI_GP:CAL12584.1;Name=CAL12584.1;gbkey=CDS;gene=fliL;product=flagellar protein FliL;protein_id=CAL12584.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2738000	2738434	.	+	.	ID=id4442;Note=Pfam match to entry PF03748 FliL%2C Flagellar basal body-associated protein FliL%2C score 123.5%2C E-value 2.5e-34;gbkey=misc_feature;gene=fliL;inference=protein motif:PFAM:PF03748
AM286415.1	EMBL	sequence_feature	2738009	2738077	.	+	.	ID=id4443;Note=1 probable transmembrane helix predicted for YE2543 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;gene=fliL;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2738443	2739447	.	+	.	ID=gene2488;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;gene_synonym=CheC2,fla AII,fla QII;locus_tag=YE2544
AM286415.1	EMBL	CDS	2738443	2739447	.	+	0	ID=cds2416;Parent=gene2488;Dbxref=EnsemblGenomes-Gn:YE2544,EnsemblGenomes-Tr:CAL12585,GOA:A1JSW7,InterPro:IPR001543,InterPro:IPR001689,InterPro:IPR028976,UniProtKB/TrEMBL:A1JSW7,NCBI_GP:CAL12585.1;Name=CAL12585.1;gbkey=CDS;gene=fliM;product=flagellar motor switch protein FliM;protein_id=CAL12585.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2738551	2739132	.	+	.	ID=id4444;Note=Pfam match to entry PF02154 FliM%2C Flagellar motor switch protein FliM%2C score 382.5%2C E-value 2.8e-112;gbkey=misc_feature;gene=fliM;inference=protein motif:PFAM:PF02154
AM286415.1	EMBL	gene	2739440	2739856	.	+	.	ID=gene2489;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;gene_synonym=flaN,motD;locus_tag=YE2545
AM286415.1	EMBL	CDS	2739440	2739856	.	+	0	ID=cds2417;Parent=gene2489;Dbxref=EnsemblGenomes-Gn:YE2545,EnsemblGenomes-Tr:CAL12586,GOA:A1JSX0,InterPro:IPR001172,InterPro:IPR001543,InterPro:IPR012826,UniProtKB/TrEMBL:A1JSX0,NCBI_GP:CAL12586.1;Name=CAL12586.1;gbkey=CDS;gene=fliN;product=flagellar motor switch protein FliN;protein_id=CAL12586.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2739599	2739829	.	+	.	ID=id4445;Note=Pfam match to entry PF01052 SpoA%2C Surface presentation of antigens (SPOA) protein%2C score 129.0%2CE-value 5.7e-36;gbkey=misc_feature;gene=fliN;inference=protein motif:PFAM:PF01052
AM286415.1	EMBL	gene	2740030	2740440	.	+	.	ID=gene2490;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;gene_synonym=mopB;locus_tag=YE2546
AM286415.1	EMBL	CDS	2740030	2740440	.	+	0	ID=cds2418;Parent=gene2490;Dbxref=EnsemblGenomes-Gn:YE2546,EnsemblGenomes-Tr:CAL12587,GOA:A1JSX5,InterPro:IPR022781,UniProtKB/TrEMBL:A1JSX5,NCBI_GP:CAL12587.1;Name=CAL12587.1;gbkey=CDS;gene=fliO;product=flagellar protein FliO;protein_id=CAL12587.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2740045	2740113	.	+	.	ID=id4446;Note=1 probable transmembrane helix predicted for YE2546 by TMHMM2.0 at aa 6-28;gbkey=misc_feature;gene=fliO;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2740503	2741189	.	+	.	ID=gene2491;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;gene_synonym=mopC;locus_tag=YE2547
AM286415.1	EMBL	CDS	2740503	2741189	.	+	0	ID=cds2419;Parent=gene2491;Dbxref=EnsemblGenomes-Gn:YE2547,EnsemblGenomes-Tr:CAL12588,GOA:A1JSX7,InterPro:IPR005837,InterPro:IPR005838,UniProtKB/TrEMBL:A1JSX7,NCBI_GP:CAL12588.1;Name=CAL12588.1;gbkey=CDS;gene=fliP;product=flagellar biosynthetic protein FliP;protein_id=CAL12588.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2740590	2741171	.	+	.	ID=id4447;Note=Pfam match to entry PF00813 FliP%2C FliP family %2Cscore 414.1%2C E-value 8.6e-122;gbkey=misc_feature;gene=fliP;inference=protein motif:PFAM:PF00813
AM286415.1	EMBL	sequence_feature	2740602	2740670	.	+	.	ID=id4448;Note=4 probable transmembrane helices predicted for YE2547 by TMHMM2.0 at aa 34-56%2C 71-88%2C 168-190 and 200-222;gbkey=misc_feature;gene=fliP;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2740713	2740766	.	+	.	ID=id4448;Note=4 probable transmembrane helices predicted for YE2547 by TMHMM2.0 at aa 34-56%2C 71-88%2C 168-190 and 200-222;gbkey=misc_feature;gene=fliP;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2741004	2741072	.	+	.	ID=id4448;Note=4 probable transmembrane helices predicted for YE2547 by TMHMM2.0 at aa 34-56%2C 71-88%2C 168-190 and 200-222;gbkey=misc_feature;gene=fliP;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2741100	2741168	.	+	.	ID=id4448;Note=4 probable transmembrane helices predicted for YE2547 by TMHMM2.0 at aa 34-56%2C 71-88%2C 168-190 and 200-222;gbkey=misc_feature;gene=fliP;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	2740965	2741012	.	+	.	ID=id4449;Note=PS01060 Flagella transport protein fliP family signature 1.;gbkey=misc_feature;gene=fliP;inference=protein motif:Prosite:PS01060
AM286415.1	EMBL	sequence_feature	2741109	2741147	.	+	.	ID=id4450;Note=PS01061 Flagella transport protein fliP family signature 2.;gbkey=misc_feature;gene=fliP;inference=protein motif:Prosite:PS01061
AM286415.1	EMBL	gene	2741201	2741470	.	+	.	ID=gene2492;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;gene_synonym=mopD;locus_tag=YE2548
AM286415.1	EMBL	CDS	2741201	2741470	.	+	0	ID=cds2420;Parent=gene2492;Dbxref=EnsemblGenomes-Gn:YE2548,EnsemblGenomes-Tr:CAL12589,GOA:A1JSY2,InterPro:IPR002191,InterPro:IPR006305,UniProtKB/TrEMBL:A1JSY2,NCBI_GP:CAL12589.1;Name=CAL12589.1;gbkey=CDS;gene=fliQ;product=flagellar biosynthetic protein FliQ;protein_id=CAL12589.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2741210	2741437	.	+	.	ID=id4451;Note=Pfam match to entry PF01313 Bac_export_3%2C Bacterial export proteins%2C family 3%2C score 146.6%2C E-value 2.8e-41;gbkey=misc_feature;gene=fliQ;inference=protein motif:PFAM:PF01313
AM286415.1	EMBL	sequence_feature	2741243	2741311	.	+	.	ID=id4452;Note=2 probable transmembrane helices predicted for YE2548 by TMHMM2.0 at aa 15-37 and 50-72;gbkey=misc_feature;gene=fliQ;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2741348	2741416	.	+	.	ID=id4452;Note=2 probable transmembrane helices predicted for YE2548 by TMHMM2.0 at aa 15-37 and 50-72;gbkey=misc_feature;gene=fliQ;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2741473	2742255	.	+	.	ID=gene2493;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;gene_synonym=mopE;locus_tag=YE2549
AM286415.1	EMBL	CDS	2741473	2742255	.	+	0	ID=cds2421;Parent=gene2493;Dbxref=EnsemblGenomes-Gn:YE2549,EnsemblGenomes-Tr:CAL12590,GOA:A1JSY8,InterPro:IPR002010,InterPro:IPR006303,UniProtKB/TrEMBL:A1JSY8,NCBI_GP:CAL12590.1;Name=CAL12590.1;gbkey=CDS;gene=fliR;product=flagellar biosynthetic protein FliR;protein_id=CAL12590.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2741491	2742228	.	+	.	ID=id4453;Note=Pfam match to entry PF01311 Bac_export_1%2C Bacterial export proteins%2C family 1%2C score 296.1%2C E-value 2.9e-86;gbkey=misc_feature;gene=fliR;inference=protein motif:PFAM:PF01311
AM286415.1	EMBL	sequence_feature	2741500	2741568	.	+	.	ID=id4454;Note=6 probable transmembrane helices predicted for YE2549 by TMHMM2.0 at aa 10-32%2C 44-66%2C 76-98%2C 128-147%2C179-201 and 213-235;gbkey=misc_feature;gene=fliR;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2741602	2741670	.	+	.	ID=id4454;Note=6 probable transmembrane helices predicted for YE2549 by TMHMM2.0 at aa 10-32%2C 44-66%2C 76-98%2C 128-147%2C179-201 and 213-235;gbkey=misc_feature;gene=fliR;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2741698	2741766	.	+	.	ID=id4454;Note=6 probable transmembrane helices predicted for YE2549 by TMHMM2.0 at aa 10-32%2C 44-66%2C 76-98%2C 128-147%2C179-201 and 213-235;gbkey=misc_feature;gene=fliR;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2741854	2741913	.	+	.	ID=id4454;Note=6 probable transmembrane helices predicted for YE2549 by TMHMM2.0 at aa 10-32%2C 44-66%2C 76-98%2C 128-147%2C179-201 and 213-235;gbkey=misc_feature;gene=fliR;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2742007	2742075	.	+	.	ID=id4454;Note=6 probable transmembrane helices predicted for YE2549 by TMHMM2.0 at aa 10-32%2C 44-66%2C 76-98%2C 128-147%2C179-201 and 213-235;gbkey=misc_feature;gene=fliR;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2742109	2742177	.	+	.	ID=id4454;Note=6 probable transmembrane helices predicted for YE2549 by TMHMM2.0 at aa 10-32%2C 44-66%2C 76-98%2C 128-147%2C179-201 and 213-235;gbkey=misc_feature;gene=fliR;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	2742771	2743751	.	-	.	ID=gene2494;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;gene_synonym=flaT,flaU;locus_tag=YE2550
AM286415.1	EMBL	CDS	2742771	2743751	.	-	0	ID=cds2422;Parent=gene2494;Dbxref=EnsemblGenomes-Gn:YE2550,EnsemblGenomes-Tr:CAL12591,GOA:A1JSZ5,InterPro:IPR001029,InterPro:IPR013384,UniProtKB/TrEMBL:A1JSZ5,NCBI_GP:CAL12591.1;Name=CAL12591.1;gbkey=CDS;gene=flgL;product=flagellar hook-associated protein 3;protein_id=CAL12591.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2743248	2743673	.	-	.	ID=id4455;Note=Pfam match to entry PF00669 Flagellin_N%2C Bacterial flagellin N-terminus%2C score 84.9%2C E-value 1.1e-22;gbkey=misc_feature;gene=flgL;inference=protein motif:PFAM:PF00669
AM286415.1	EMBL	gene	2743865	2745529	.	-	.	ID=gene2495;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;gene_synonym=flaS,flaW;locus_tag=YE2551
AM286415.1	EMBL	CDS	2743865	2745529	.	-	0	ID=cds2423;Parent=gene2495;Dbxref=EnsemblGenomes-Gn:YE2551,EnsemblGenomes-Tr:CAL12592,GOA:A1JSZ7,InterPro:IPR001444,InterPro:IPR002371,InterPro:IPR010930,UniProtKB/TrEMBL:A1JSZ7,NCBI_GP:CAL12592.1;Name=CAL12592.1;gbkey=CDS;gene=flgK;product=flagellar hook-associated protein 1;protein_id=CAL12592.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2745422	2745514	.	-	.	ID=id4456;Note=Pfam match to entry PF00460 flg_bb_rod%2C Flagella basal body rod protein%2C score 31.3%2C E-value 1.5e-06;gbkey=misc_feature;gene=flgK;inference=protein motif:PFAM:PF00460
AM286415.1	EMBL	gene	2745852	2746775	.	-	.	ID=gene2496;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;gene_synonym=fla FX,flaZ;locus_tag=YE2552
AM286415.1	EMBL	CDS	2745852	2746775	.	-	0	ID=cds2424;Parent=gene2496;Dbxref=EnsemblGenomes-Gn:YE2552,EnsemblGenomes-Tr:CAL12593,GOA:A1JT00,InterPro:IPR002901,InterPro:IPR013338,InterPro:IPR013377,InterPro:IPR019301,UniProtKB/TrEMBL:A1JT00,NCBI_GP:CAL12593.1;Name=CAL12593.1;gbkey=CDS;gene=flgJ;product=flagellar protein FlgJ;protein_id=CAL12593.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2745900	2746352	.	-	.	ID=id4457;Note=Pfam match to entry PF01832 Amidase_4%2CMannosyl-glycoprotein endo-beta-N-acetylglucosamidase %2Cscore 192.9%2C E-value 3.2e-55;gbkey=misc_feature;gene=flgJ;inference=protein motif:PFAM:PF01832
AM286415.1	EMBL	gene	2746814	2747890	.	-	.	ID=gene2497;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;gene_synonym=fla FIX,flaM;locus_tag=YE2553
AM286415.1	EMBL	CDS	2746814	2747890	.	-	0	ID=cds2425;Parent=gene2497;Dbxref=EnsemblGenomes-Gn:YE2553,EnsemblGenomes-Tr:CAL12594,GOA:A1JT04,InterPro:IPR001782,UniProtKB/TrEMBL:A1JT04,NCBI_GP:CAL12594.1;Name=CAL12594.1;gbkey=CDS;gene=flgI;product=flagellar P-ring protein precursor;protein_id=CAL12594.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2746817	2747851	.	-	.	ID=id4458;Note=Pfam match to entry PF02119 FlgI%2C Flagellar P-ring protein%2C score 713.0%2C E-value 8.9e-212;gbkey=misc_feature;gene=flgI;inference=protein motif:PFAM:PF02119
AM286415.1	EMBL	gene	2747947	2748630	.	-	.	ID=gene2498;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;gene_synonym=fla FVIII,flaY;locus_tag=YE2554
AM286415.1	EMBL	CDS	2747947	2748630	.	-	0	ID=cds2426;Parent=gene2498;Dbxref=EnsemblGenomes-Gn:YE2554,EnsemblGenomes-Tr:CAL12595,GOA:A1JT07,InterPro:IPR000527,UniProtKB/TrEMBL:A1JT07,NCBI_GP:CAL12595.1;Name=CAL12595.1;gbkey=CDS;gene=flgH;product=flagellar L-ring protein precursor;protein_id=CAL12595.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2747953	2748582	.	-	.	ID=id4459;Note=Pfam match to entry PF02107 FlgH%2C Flagellar L-ring protein%2C score 330.5%2C E-value 1.2e-96;gbkey=misc_feature;gene=flgH;inference=protein motif:PFAM:PF02107
AM286415.1	EMBL	gene	2748755	2749408	.	-	.	ID=gene2499;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;gene_synonym=fla FVII,flaL;locus_tag=YE2555
AM286415.1	EMBL	CDS	2748755	2749408	.	-	0	ID=cds2427;Parent=gene2499;Dbxref=EnsemblGenomes-Gn:YE2555,EnsemblGenomes-Tr:CAL12596,GOA:A1JT09,InterPro:IPR010930,InterPro:IPR012834,InterPro:IPR020013,UniProtKB/TrEMBL:A1JT09,NCBI_GP:CAL12596.1;Name=CAL12596.1;gbkey=CDS;gene=flgG;product=flagellar basal-body rod protein FlgG;protein_id=CAL12596.1;transl_table=11
AM286415.1	EMBL	gene	2749564	2750319	.	-	.	ID=gene2500;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;gene_synonym=fla FVI,flaX;locus_tag=YE2556
AM286415.1	EMBL	CDS	2749564	2750319	.	-	0	ID=cds2428;Parent=gene2500;Dbxref=EnsemblGenomes-Gn:YE2556,EnsemblGenomes-Tr:CAL12597,GOA:A1JT11,InterPro:IPR001444,InterPro:IPR010930,InterPro:IPR020013,UniProtKB/TrEMBL:A1JT11,NCBI_GP:CAL12597.1;Name=CAL12597.1;gbkey=CDS;gene=flgF;product=flagellar basal-body rod protein FlgF;protein_id=CAL12597.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2750215	2750307	.	-	.	ID=id4460;Note=Pfam match to entry PF00460 flg_bb_rod%2C Flagella basal body rod protein%2C score 39.9%2C E-value 3.7e-09;gbkey=misc_feature;gene=flgF;inference=protein motif:PFAM:PF00460
AM286415.1	EMBL	sequence_feature	2750227	2750289	.	-	.	ID=id4461;Note=PS00588 Flagella basal body rod proteins signature.;gbkey=misc_feature;gene=flgF;inference=protein motif:Prosite:PS00588
AM286415.1	EMBL	gene	2750341	2751600	.	-	.	ID=gene2501;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;gene_synonym=Fla FV,flaK;locus_tag=YE2557
AM286415.1	EMBL	CDS	2750341	2751600	.	-	0	ID=cds2429;Parent=gene2501;Dbxref=EnsemblGenomes-Gn:YE2557,EnsemblGenomes-Tr:CAL12598,GOA:A1JT15,InterPro:IPR001444,InterPro:IPR010930,InterPro:IPR011491,InterPro:IPR019776,InterPro:IPR020013,UniProtKB/TrEMBL:A1JT15,NCBI_GP:CAL12598.1;Name=CAL12598.1;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=CAL12598.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2751502	2751594	.	-	.	ID=id4462;Note=Pfam match to entry PF00460 flg_bb_rod%2C Flagella basal body rod protein%2C score 51.5%2C E-value 1.2e-12;gbkey=misc_feature;gene=flgE;inference=protein motif:PFAM:PF00460
AM286415.1	EMBL	sequence_feature	2751514	2751576	.	-	.	ID=id4463;Note=PS00588 Flagella basal body rod proteins signature.;gbkey=misc_feature;gene=flgE;inference=protein motif:Prosite:PS00588
AM286415.1	EMBL	gene	2751944	2752519	.	-	.	ID=gene2502;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;gene_synonym=Fla FIV,flaV;locus_tag=YE2558
AM286415.1	EMBL	CDS	2751944	2752519	.	-	0	ID=cds2430;Parent=gene2502;Dbxref=EnsemblGenomes-Gn:YE2558,EnsemblGenomes-Tr:CAL12599,InterPro:IPR005648,InterPro:IPR025963,InterPro:IPR025965,UniProtKB/TrEMBL:A1JT17,NCBI_GP:CAL12599.1;Name=CAL12599.1;gbkey=CDS;gene=flgD;product=basal-body rod modification protein FlgD;protein_id=CAL12599.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2752115	2752138	.	-	.	ID=id4464;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=misc_feature;gene=flgD;inference=protein motif:Prosite:PS00687
AM286415.1	EMBL	sequence_feature	2752187	2752519	.	-	.	ID=id4465;Note=Pfam match to entry PF03963 FlgD%2C Flagellar hook capping protein%2C score 95.9%2C E-value 5.3e-26;gbkey=misc_feature;gene=flgD;inference=protein motif:PFAM:PF03963
AM286415.1	EMBL	gene	2752646	2753050	.	-	.	ID=gene2503;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;gene_synonym=fla FIII,flaW;locus_tag=YE2559
AM286415.1	EMBL	CDS	2752646	2753050	.	-	0	ID=cds2431;Parent=gene2503;Dbxref=EnsemblGenomes-Gn:YE2559,EnsemblGenomes-Tr:CAL12600,GOA:A1JT20,InterPro:IPR001444,InterPro:IPR006299,InterPro:IPR010930,InterPro:IPR019776,UniProtKB/TrEMBL:A1JT20,NCBI_GP:CAL12600.1;Name=CAL12600.1;gbkey=CDS;gene=flgC;product=flagellar basal-body rod protein FlgC;protein_id=CAL12600.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2752937	2753032	.	-	.	ID=id4466;Note=Pfam match to entry PF00460 flg_bb_rod%2C Flagella basal body rod protein%2C score 44.2%2C E-value 2e-10;gbkey=misc_feature;gene=flgC;inference=protein motif:PFAM:PF00460
AM286415.1	EMBL	sequence_feature	2752952	2753014	.	-	.	ID=id4467;Note=PS00588 Flagella basal body rod proteins signature.;gbkey=misc_feature;gene=flgC;inference=protein motif:Prosite:PS00588
AM286415.1	EMBL	gene	2753056	2753469	.	-	.	ID=gene2504;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;gene_synonym=fla FII,flbA;locus_tag=YE2560
AM286415.1	EMBL	CDS	2753056	2753469	.	-	0	ID=cds2432;Parent=gene2504;Dbxref=EnsemblGenomes-Gn:YE2560,EnsemblGenomes-Tr:CAL12601,GOA:A1JT24,InterPro:IPR001444,InterPro:IPR006300,InterPro:IPR019776,UniProtKB/TrEMBL:A1JT24,NCBI_GP:CAL12601.1;Name=CAL12601.1;gbkey=CDS;gene=flgB;product=flagellar basal-body rod protein FlgB;protein_id=CAL12601.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2753353	2753445	.	-	.	ID=id4468;Note=Pfam match to entry PF00460 flg_bb_rod%2C Flagella basal body rod protein%2C score 52.4%2C E-value 6.4e-13;gbkey=misc_feature;gene=flgB;inference=protein motif:PFAM:PF00460
AM286415.1	EMBL	sequence_feature	2753365	2753427	.	-	.	ID=id4469;Note=PS00588 Flagella basal body rod proteins signature.;gbkey=misc_feature;gene=flgB;inference=protein motif:Prosite:PS00588
AM286415.1	EMBL	gene	2753731	2754333	.	+	.	ID=gene2505;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=YE2561
AM286415.1	EMBL	CDS	2753731	2754333	.	+	0	ID=cds2433;Parent=gene2505;Dbxref=EnsemblGenomes-Gn:YE2561,EnsemblGenomes-Tr:CAL12602,InterPro:IPR013974,InterPro:IPR017585,UniProtKB/TrEMBL:A1JT29,NCBI_GP:CAL12602.1;Name=CAL12602.1;gbkey=CDS;gene=flgA;product=flagella basal body P-ring formation protein FlgA;protein_id=CAL12602.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2753833	2754330	.	+	.	ID=id4470;Note=Pfam match to entry PF03240 FlgA%2C FlgA family %2Cscore 285.8%2C E-value 3.4e-83;gbkey=misc_feature;gene=flgA;inference=protein motif:PFAM:PF03240
AM286415.1	EMBL	gene	2754540	2754797	.	+	.	ID=gene2506;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=YE2562
AM286415.1	EMBL	CDS	2754540	2754797	.	+	0	ID=cds2434;Parent=gene2506;Dbxref=EnsemblGenomes-Gn:YE2562,EnsemblGenomes-Tr:CAL12603,GOA:A1JT31,InterPro:IPR007412,NCBI_GP:CAL12603.1;Name=CAL12603.1;gbkey=CDS;gene=flgM;product=negative regulator of flagellin synthesis;protein_id=CAL12603.1;transl_table=11
AM286415.1	EMBL	gene	2754849	2755289	.	+	.	ID=gene2507;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=YE2563
AM286415.1	EMBL	CDS	2754849	2755289	.	+	0	ID=cds2435;Parent=gene2507;Dbxref=EnsemblGenomes-Gn:YE2563,EnsemblGenomes-Tr:CAL12604,GOA:A1JT33,InterPro:IPR007809,NCBI_GP:CAL12604.1;Name=CAL12604.1;gbkey=CDS;gene=flgN;product=flagella synthesis protein FlgN;protein_id=CAL12604.1;transl_table=11
AM286415.1	EMBL	gene	2755292	2757799	.	-	.	ID=gene2508;Name=invA;gbkey=Gene;gene=invA;gene_biotype=protein_coding;locus_tag=YE2564
AM286415.1	EMBL	CDS	2755292	2757799	.	-	0	ID=cds2436;Parent=gene2508;Dbxref=EnsemblGenomes-Gn:YE2564,EnsemblGenomes-Tr:CAL12605,GOA:A1JT35,InterPro:IPR003344,InterPro:IPR003535,InterPro:IPR008964,InterPro:IPR013117,InterPro:IPR015217,InterPro:IPR016186,InterPro:IPR016187,InterPro:IPR024519,UniProtKB/TrEMBL:A1JT35,NCBI_GP:CAL12605.1;Name=CAL12605.1;gbkey=CDS;gene=invA;product=invasin;protein_id=CAL12605.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2756174	2756473	.	-	.	ID=id4471;Note=Pfam match to entry PF02369 Big_1%2C Bacterial Ig-like domain (group 1)%2C score 105.4%2C E-value 7.1e-29;gbkey=misc_feature;gene=invA;inference=protein motif:PFAM:PF02369
AM286415.1	EMBL	sequence_feature	2756564	2756587	.	-	.	ID=id4472;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=invA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2757704	2757763	.	-	.	ID=id4473;Note=1 probable transmembrane helix predicted for YE2564 by TMHMM2.0 at aa 13-32;gbkey=misc_feature;gene=invA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2758310	2758732	.	-	.	ID=gene2509;Name=flhE;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=YE2565
AM286415.1	EMBL	CDS	2758310	2758732	.	-	0	ID=cds2437;Parent=gene2509;Dbxref=EnsemblGenomes-Gn:YE2565,EnsemblGenomes-Tr:CAL12606,InterPro:IPR009420,UniProtKB/TrEMBL:A1JT38,NCBI_GP:CAL12606.1;Name=CAL12606.1;gbkey=CDS;gene=flhE;product=flagellar protein FlhE precursor;protein_id=CAL12606.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2758640	2758708	.	-	.	ID=id4474;Note=1 probable transmembrane helix predicted for YE2565 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;gene=flhE;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2758732	2760810	.	-	.	ID=gene2510;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=YE2566
AM286415.1	EMBL	CDS	2758732	2760810	.	-	0	ID=cds2438;Parent=gene2510;Dbxref=EnsemblGenomes-Gn:YE2566,EnsemblGenomes-Tr:CAL12607,GOA:A1JT43,InterPro:IPR001712,InterPro:IPR006301,InterPro:IPR025505,UniProtKB/TrEMBL:A1JT43,NCBI_GP:CAL12607.1;Name=CAL12607.1;gbkey=CDS;gene=flhA;product=flagellar biosynthesis protein FlhA;protein_id=CAL12607.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2758762	2760723	.	-	.	ID=id4475;Note=Pfam match to entry PF00771 FHIPEP%2C FHIPEP family %2Cscore 1266.7%2C E-value 0;gbkey=misc_feature;gene=flhA;inference=protein motif:PFAM:PF00771
AM286415.1	EMBL	sequence_feature	2760697	2760750	.	-	.	ID=id4476;Note=7 probable transmembrane helices predicted for YE2566 by TMHMM2.0 at aa 21-38%2C 42-64%2C 76-98%2C 113-135%2C209-231%2C 251-273 and 294-316;gbkey=misc_feature;gene=flhA;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	2760619	2760687	.	-	.	ID=id4476;Note=7 probable transmembrane helices predicted for YE2566 by TMHMM2.0 at aa 21-38%2C 42-64%2C 76-98%2C 113-135%2C209-231%2C 251-273 and 294-316;gbkey=misc_feature;gene=flhA;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	2760517	2760585	.	-	.	ID=id4476;Note=7 probable transmembrane helices predicted for YE2566 by TMHMM2.0 at aa 21-38%2C 42-64%2C 76-98%2C 113-135%2C209-231%2C 251-273 and 294-316;gbkey=misc_feature;gene=flhA;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	2760406	2760474	.	-	.	ID=id4476;Note=7 probable transmembrane helices predicted for YE2566 by TMHMM2.0 at aa 21-38%2C 42-64%2C 76-98%2C 113-135%2C209-231%2C 251-273 and 294-316;gbkey=misc_feature;gene=flhA;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	2760118	2760186	.	-	.	ID=id4476;Note=7 probable transmembrane helices predicted for YE2566 by TMHMM2.0 at aa 21-38%2C 42-64%2C 76-98%2C 113-135%2C209-231%2C 251-273 and 294-316;gbkey=misc_feature;gene=flhA;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	2759992	2760060	.	-	.	ID=id4476;Note=7 probable transmembrane helices predicted for YE2566 by TMHMM2.0 at aa 21-38%2C 42-64%2C 76-98%2C 113-135%2C209-231%2C 251-273 and 294-316;gbkey=misc_feature;gene=flhA;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	2759863	2759931	.	-	.	ID=id4476;Note=7 probable transmembrane helices predicted for YE2566 by TMHMM2.0 at aa 21-38%2C 42-64%2C 76-98%2C 113-135%2C209-231%2C 251-273 and 294-316;gbkey=misc_feature;gene=flhA;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	2760301	2760372	.	-	.	ID=id4477;Note=PS00994 Bacterial export FHIPEP family signature.;gbkey=misc_feature;gene=flhA;inference=protein motif:Prosite:PS00994
AM286415.1	EMBL	gene	2760810	2761961	.	-	.	ID=gene2511;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=YE2567
AM286415.1	EMBL	CDS	2760810	2761961	.	-	0	ID=cds2439;Parent=gene2511;Dbxref=EnsemblGenomes-Gn:YE2567,EnsemblGenomes-Tr:CAL12608,GOA:A1JT48,InterPro:IPR006135,InterPro:IPR006136,InterPro:IPR029025,UniProtKB/TrEMBL:A1JT48,NCBI_GP:CAL12608.1;Name=CAL12608.1;gbkey=CDS;gene=flhB;product=flagellar biosynthetic protein FlhB;protein_id=CAL12608.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2760918	2761946	.	-	.	ID=id4478;Note=Pfam match to entry PF01312 Bac_export_2%2C FlhB HrpN YscU SpaS Family%2C score 639.1%2C E-value 1.6e-189;gbkey=misc_feature;gene=flhB;inference=protein motif:PFAM:PF01312
AM286415.1	EMBL	sequence_feature	2761812	2761865	.	-	.	ID=id4479;Note=4 probable transmembrane helices predicted for YE2567 by TMHMM2.0 at aa 33-50%2C 90-112%2C 146-168 and 189-211;gbkey=misc_feature;gene=flhB;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2761626	2761694	.	-	.	ID=id4479;Note=4 probable transmembrane helices predicted for YE2567 by TMHMM2.0 at aa 33-50%2C 90-112%2C 146-168 and 189-211;gbkey=misc_feature;gene=flhB;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2761458	2761526	.	-	.	ID=id4479;Note=4 probable transmembrane helices predicted for YE2567 by TMHMM2.0 at aa 33-50%2C 90-112%2C 146-168 and 189-211;gbkey=misc_feature;gene=flhB;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2761329	2761397	.	-	.	ID=id4479;Note=4 probable transmembrane helices predicted for YE2567 by TMHMM2.0 at aa 33-50%2C 90-112%2C 146-168 and 189-211;gbkey=misc_feature;gene=flhB;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2762376	2764025	.	+	.	ID=gene2512;Name=hreP;gbkey=Gene;gene=hreP;gene_biotype=protein_coding;locus_tag=YE2568
AM286415.1	EMBL	CDS	2762376	2764025	.	+	0	ID=cds2440;Parent=gene2512;Dbxref=EnsemblGenomes-Gn:YE2568,EnsemblGenomes-Tr:CAL12609,GOA:A1JT53,InterPro:IPR000209,InterPro:IPR015500,InterPro:IPR022398,InterPro:IPR023827,InterPro:IPR023828,UniProtKB/TrEMBL:A1JT53,NCBI_GP:CAL12609.1;Name=CAL12609.1;Note=Previously sequenced as Yersinia enterocolitica subtilisin/kexin-like protease HreP SWALL:Q93P02 (EMBL:AF354753) (549 aa) fasta scores: E(): 0%2C 100 38d in 549 aa. Also highly similar to Anabaena sp. calcium-dependent protease precursor PrcA or Alr1381 SWALL:PRCA_ANASP (SWALL:Q59149) (662 aa) fasta scores: E(): 1e-90%2C 47.45 38d in 550 aa;gbkey=CDS;gene=hreP;inference=similar to sequence:UniProtKB:Q59149;product=subtilisin/kexin-like protease;protein_id=CAL12609.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2762919	2763980	.	+	.	ID=id4480;Note=Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family%2C score 181.3%2C E-value 1e-51;gbkey=misc_feature;gene=hreP;inference=protein motif:PFAM:PF00082
AM286415.1	EMBL	sequence_feature	2763045	2763080	.	+	.	ID=id4481;Note=PS00136 Serine proteases%2C subtilase family%2Caspartic acid active site.;gbkey=misc_feature;gene=hreP;inference=protein motif:Prosite:PS00136
AM286415.1	EMBL	sequence_feature	2763171	2763203	.	+	.	ID=id4482;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hreP;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2763174	2763206	.	+	.	ID=id4483;Note=PS00137 Serine proteases%2C subtilase family%2Chistidine active site.;gbkey=misc_feature;gene=hreP;inference=protein motif:Prosite:PS00137
AM286415.1	EMBL	sequence_feature	2763780	2763812	.	+	.	ID=id4484;Note=PS00138 Serine proteases%2C subtilase family%2C serine active site.;gbkey=misc_feature;gene=hreP;inference=protein motif:Prosite:PS00138
AM286415.1	EMBL	gene	2764110	2764754	.	-	.	ID=gene2513;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=YE2569
AM286415.1	EMBL	CDS	2764110	2764754	.	-	0	ID=cds2441;Parent=gene2513;Dbxref=EnsemblGenomes-Gn:YE2569,EnsemblGenomes-Tr:CAL12610,GOA:A1JT58,InterPro:IPR007439,UniProtKB/TrEMBL:A1JT58,NCBI_GP:CAL12610.1;Name=CAL12610.1;gbkey=CDS;gene=cheZ;product=chemotaxis protein CheZ;protein_id=CAL12610.1;transl_table=11
AM286415.1	EMBL	gene	2764764	2765153	.	-	.	ID=gene2514;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=YE2570
AM286415.1	EMBL	CDS	2764764	2765153	.	-	0	ID=cds2442;Parent=gene2514;Dbxref=EnsemblGenomes-Gn:YE2570,EnsemblGenomes-Tr:CAL12611,GOA:A1JT60,InterPro:IPR001789,InterPro:IPR011006,UniProtKB/TrEMBL:A1JT60,NCBI_GP:CAL12611.1;Name=CAL12611.1;gbkey=CDS;gene=cheY;product=chemotaxis protein CheY;protein_id=CAL12611.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2764770	2765138	.	-	.	ID=id4485;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 152.8%2C E-value 3.8e-43;gbkey=misc_feature;gene=cheY;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	2765345	2766394	.	-	.	ID=gene2515;Name=cheB;gbkey=Gene;gene=cheB;gene_biotype=protein_coding;locus_tag=YE2571
AM286415.1	EMBL	CDS	2765345	2766394	.	-	0	ID=cds2443;Parent=gene2515;Dbxref=EnsemblGenomes-Gn:YE2571,EnsemblGenomes-Tr:CAL12612,GOA:A1JT63,InterPro:IPR000673,InterPro:IPR001789,InterPro:IPR008248,InterPro:IPR011006,UniProtKB/TrEMBL:A1JT63,NCBI_GP:CAL12612.1;Name=CAL12612.1;gbkey=CDS;gene=cheB;product=protein-glutamate methylesterase;protein_id=CAL12612.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2765375	2765923	.	-	.	ID=id4486;Note=Pfam match to entry PF01339 CheB_methylest%2C CheB methylesterase%2C score 430.4%2C E-value 1e-126;gbkey=misc_feature;gene=cheB;inference=protein motif:PFAM:PF01339
AM286415.1	EMBL	sequence_feature	2766014	2766385	.	-	.	ID=id4487;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 122.8%2C E-value 4.3e-34;gbkey=misc_feature;gene=cheB;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	2766394	2767221	.	-	.	ID=gene2516;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;gene_synonym=cheX;locus_tag=YE2572
AM286415.1	EMBL	CDS	2766394	2767221	.	-	0	ID=cds2444;Parent=gene2516;Dbxref=EnsemblGenomes-Gn:YE2572,EnsemblGenomes-Tr:CAL12613,GOA:A1JT66,InterPro:IPR000780,InterPro:IPR022641,InterPro:IPR022642,InterPro:IPR026024,InterPro:IPR029063,UniProtKB/TrEMBL:A1JT66,NCBI_GP:CAL12613.1;Name=CAL12613.1;gbkey=CDS;gene=cheR;product=chemotaxis protein methyltransferase;protein_id=CAL12613.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2766409	2766984	.	-	.	ID=id4488;Note=Pfam match to entry PF01739 CheR%2C CheR methyltransferase%2C SAM binding domain%2C score 274.4%2CE-value 9.8e-80;gbkey=misc_feature;gene=cheR;inference=protein motif:PFAM:PF01739
AM286415.1	EMBL	sequence_feature	2767021	2767191	.	-	.	ID=id4489;Note=Pfam match to entry PF03705 CheR_N%2C CheR methyltransferase%2C all-alpha domain%2C score 85.3%2C E-value 7.9e-23;gbkey=misc_feature;gene=cheR;inference=protein motif:PFAM:PF03705
AM286415.1	EMBL	gene	2767283	2768920	.	-	.	ID=gene2517;Name=YE2573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2573
AM286415.1	EMBL	CDS	2767283	2768920	.	-	0	ID=cds2445;Parent=gene2517;Dbxref=EnsemblGenomes-Gn:YE2573,EnsemblGenomes-Tr:CAL12614,GOA:A1JT71,InterPro:IPR003122,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,InterPro:IPR004091,UniProtKB/TrEMBL:A1JT71,NCBI_GP:CAL12614.1;Name=CAL12614.1;gbkey=CDS;product=methyl-accepting chemotaxis protein;protein_id=CAL12614.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2767373	2768071	.	-	.	ID=id4490;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 389.1%2C E-value 2.9e-114;gbkey=misc_feature;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	sequence_feature	2767979	2768047	.	-	.	ID=id4491;Note=PS00538 Bacterial chemotaxis sensory transducers signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00538
AM286415.1	EMBL	sequence_feature	2768132	2768341	.	-	.	ID=id4492;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 54.9%2C E-value 1.1e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	2768825	2768893	.	-	.	ID=id4493;Note=2 probable transmembrane helices predicted for YE2573 by TMHMM2.0 at aa 10-32 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2768288	2768356	.	-	.	ID=id4493;Note=2 probable transmembrane helices predicted for YE2573 by TMHMM2.0 at aa 10-32 and 189-211;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2768381	2768791	.	-	.	ID=id4494;Note=Pfam match to entry PF02203 TarH%2C Tar ligand binding domain homologue%2C score 118.1%2C E-value 1.1e-32;gbkey=misc_feature;inference=protein motif:PFAM:PF02203
AM286415.1	EMBL	gene	2769105	2770778	.	-	.	ID=gene2518;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=YE2575
AM286415.1	EMBL	CDS	2769105	2770778	.	-	0	ID=cds2446;Parent=gene2518;Dbxref=EnsemblGenomes-Gn:YE2575,EnsemblGenomes-Tr:CAL12615,GOA:A1JT77,InterPro:IPR003122,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,InterPro:IPR004091,UniProtKB/TrEMBL:A1JT77,NCBI_GP:CAL12615.1;Name=CAL12615.1;gbkey=CDS;gene=cheD;product=methyl-accepting chemotaxis protein;protein_id=CAL12615.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2769225	2769923	.	-	.	ID=id4495;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 410.1%2C E-value 1.4e-120;gbkey=misc_feature;gene=cheD;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	sequence_feature	2769831	2769899	.	-	.	ID=id4496;Note=PS00538 Bacterial chemotaxis sensory transducers signature.;gbkey=misc_feature;gene=cheD;inference=protein motif:Prosite:PS00538
AM286415.1	EMBL	sequence_feature	2769984	2770193	.	-	.	ID=id4497;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 67.7%2C E-value 1.6e-17;gbkey=misc_feature;gene=cheD;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	2770683	2770751	.	-	.	ID=id4498;Note=2 probable transmembrane helices predicted for YE2575 by TMHMM2.0 at aa 10-32 and 191-213;gbkey=misc_feature;gene=cheD;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2770140	2770208	.	-	.	ID=id4498;Note=2 probable transmembrane helices predicted for YE2575 by TMHMM2.0 at aa 10-32 and 191-213;gbkey=misc_feature;gene=cheD;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2770233	2770649	.	-	.	ID=id4499;Note=Pfam match to entry PF02203 TarH%2C Tar ligand binding domain homologue%2C score 165.1%2C E-value 7.8e-47;gbkey=misc_feature;gene=cheD;inference=protein motif:PFAM:PF02203
AM286415.1	EMBL	gene	2771060	2771557	.	-	.	ID=gene2519;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=YE2576
AM286415.1	EMBL	CDS	2771060	2771557	.	-	0	ID=cds2447;Parent=gene2519;Dbxref=EnsemblGenomes-Gn:YE2576,EnsemblGenomes-Tr:CAL12616,GOA:A1JT81,InterPro:IPR002545,UniProtKB/TrEMBL:A1JT81,NCBI_GP:CAL12616.1;Name=CAL12616.1;gbkey=CDS;gene=cheW;product=chemotaxis protein CheW;protein_id=CAL12616.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2771093	2771512	.	-	.	ID=id4500;Note=Pfam match to entry PF01584 CheW%2C CheW-like domain%2C score 186.5%2C E-value 2.7e-53;gbkey=misc_feature;gene=cheW;inference=protein motif:PFAM:PF01584
AM286415.1	EMBL	gene	2771738	2773792	.	-	.	ID=gene2520;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=YE2577
AM286415.1	EMBL	CDS	2771738	2773792	.	-	0	ID=cds2448;Parent=gene2520;Dbxref=EnsemblGenomes-Gn:YE2577,EnsemblGenomes-Tr:CAL12617,GOA:A1JT85,InterPro:IPR002545,InterPro:IPR003594,InterPro:IPR004105,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR008207,InterPro:IPR009082,InterPro:IPR015162,UniProtKB/TrEMBL:A1JT85,NCBI_GP:CAL12617.1;Name=CAL12617.1;gbkey=CDS;gene=cheA;product=chemotaxis protein CheA;protein_id=CAL12617.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2771777	2772181	.	-	.	ID=id4501;Note=Pfam match to entry PF01584 CheW%2C CheW-like domain%2C score 124.6%2C E-value 1.2e-34;gbkey=misc_feature;gene=cheA;inference=protein motif:PFAM:PF01584
AM286415.1	EMBL	sequence_feature	2772188	2772607	.	-	.	ID=id4502;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 90.4%2C E-value 2.4e-24;gbkey=misc_feature;gene=cheA;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	2772740	2772931	.	-	.	ID=id4503;Note=Pfam match to entry PF02895 H-kinase_dim%2C Signal transducing histidine kinase%2C homodimeric domain%2C score 96.1%2C E-value 4.6e-26;gbkey=misc_feature;gene=cheA;inference=protein motif:PFAM:PF02895
AM286415.1	EMBL	sequence_feature	2773466	2773780	.	-	.	ID=id4504;Note=Pfam match to entry PF01627 Hpt%2C Hpt domain%2C score 139.5%2C E-value 3.9e-39;gbkey=misc_feature;gene=cheA;inference=protein motif:PFAM:PF01627
AM286415.1	EMBL	sequence_feature	2773733	2773759	.	-	.	ID=id4505;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;gbkey=misc_feature;gene=cheA;inference=protein motif:Prosite:PS00039
AM286415.1	EMBL	gene	2773803	2775047	.	-	.	ID=gene2521;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=YE2578
AM286415.1	EMBL	CDS	2773803	2775047	.	-	0	ID=cds2449;Parent=gene2521;Dbxref=EnsemblGenomes-Gn:YE2578,EnsemblGenomes-Tr:CAL12618,InterPro:IPR006665,InterPro:IPR025713,UniProtKB/TrEMBL:A1JT90,NCBI_GP:CAL12618.1;Name=CAL12618.1;gbkey=CDS;gene=motB;product=chemotaxis MotB protein;protein_id=CAL12618.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2774277	2774573	.	-	.	ID=id4506;Note=Pfam match to entry PF00691 OmpA%2C OmpA family %2Cscore 103.0%2C E-value 3.7e-28;gbkey=misc_feature;gene=motB;inference=protein motif:PFAM:PF00691
AM286415.1	EMBL	sequence_feature	2774910	2774978	.	-	.	ID=id4507;Note=1 probable transmembrane helix predicted for YE2578 by TMHMM2.0 at aa 24-46;gbkey=misc_feature;gene=motB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2775044	2775931	.	-	.	ID=gene2522;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=YE2579
AM286415.1	EMBL	CDS	2775044	2775931	.	-	0	ID=cds2450;Parent=gene2522;Dbxref=EnsemblGenomes-Gn:YE2579,EnsemblGenomes-Tr:CAL12619,GOA:A1JT92,InterPro:IPR000540,InterPro:IPR002898,InterPro:IPR022522,UniProtKB/TrEMBL:A1JT92,NCBI_GP:CAL12619.1;Name=CAL12619.1;gbkey=CDS;gene=motA;product=chemotaxis MotA protein;protein_id=CAL12619.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2775860	2775928	.	-	.	ID=id4508;Note=4 probable transmembrane helices predicted for YE2579 by TMHMM2.0 at aa 2-24%2C 34-51%2C 171-190 and 205-227;gbkey=misc_feature;gene=motA;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2775779	2775832	.	-	.	ID=id4508;Note=4 probable transmembrane helices predicted for YE2579 by TMHMM2.0 at aa 2-24%2C 34-51%2C 171-190 and 205-227;gbkey=misc_feature;gene=motA;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2775362	2775421	.	-	.	ID=id4508;Note=4 probable transmembrane helices predicted for YE2579 by TMHMM2.0 at aa 2-24%2C 34-51%2C 171-190 and 205-227;gbkey=misc_feature;gene=motA;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2775251	2775319	.	-	.	ID=id4508;Note=4 probable transmembrane helices predicted for YE2579 by TMHMM2.0 at aa 2-24%2C 34-51%2C 171-190 and 205-227;gbkey=misc_feature;gene=motA;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	2775266	2775319	.	-	.	ID=id4509;Note=PS01307 Flagellar motor protein motA family signature.;gbkey=misc_feature;gene=motA;inference=protein motif:Prosite:PS01307
AM286415.1	EMBL	gene	2776069	2776650	.	-	.	ID=gene2523;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=YE2580
AM286415.1	EMBL	CDS	2776069	2776650	.	-	0	ID=cds2451;Parent=gene2523;Dbxref=EnsemblGenomes-Gn:YE2580,EnsemblGenomes-Tr:CAL12620,GOA:A1JT95,InterPro:IPR007944,UniProtKB/TrEMBL:A1JT95,NCBI_GP:CAL12620.1;Name=CAL12620.1;gbkey=CDS;gene=flhC;product=flagellum biosynthesis transcription activator;protein_id=CAL12620.1;transl_table=11
AM286415.1	EMBL	gene	2776654	2777013	.	-	.	ID=gene2524;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=YE2581
AM286415.1	EMBL	CDS	2776654	2777013	.	-	0	ID=cds2452;Parent=gene2524;Dbxref=EnsemblGenomes-Gn:YE2581,EnsemblGenomes-Tr:CAL12621,GOA:A1JT97,InterPro:IPR023559,UniProtKB/TrEMBL:A1JT97,NCBI_GP:CAL12621.1;Name=CAL12621.1;Note=Previously sequenced as Yersinia enterocolitica flagellar transcriptional activator FlhD SWALL:FLHD_YEREN (SWALL:O86046) (119 aa) fasta scores: E(): 2.3e-45%2C 100 id in 119 aa. Also highly similar to Serratia marcescens flagellar transcriptional activator FlhD SWALL:FLHD_SERMA (SWALL:O85806) (119 aa) fasta scores: E(): 4.6e-37%2C 85.71 id in 119 aa;gbkey=CDS;gene=flhD;inference=similar to sequence:UniProtKB:O86046;product=flagellar transcriptional activator;protein_id=CAL12621.1;transl_table=11
AM286415.1	EMBL	gene	2778028	2778447	.	+	.	ID=gene2525;Name=YE2583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2583
AM286415.1	EMBL	CDS	2778028	2778447	.	+	0	ID=cds2453;Parent=gene2525;Dbxref=EnsemblGenomes-Gn:YE2583,EnsemblGenomes-Tr:CAL12622,GOA:A1JT99,InterPro:IPR006015,InterPro:IPR006016,InterPro:IPR014729,UniProtKB/TrEMBL:A1JT99,NCBI_GP:CAL12622.1;Name=CAL12622.1;Note=Similar to many including: Yersinia pestis universal stress protein a UspA or Ypo3970 SWALL:Q8ZA49 (EMBL:AJ414160) (148 aa) fasta scores: E(): 4.3e-15%2C39.28 38d in 140 aa%2C Escherichia coli O157:H7 putative regulator YecG or z2948 or ecs2603 SWALL:Q8X560 (EMBL:AE005411) (142 aa) fasta scores: E(): 9.2e-29%2C55.39 38d in 139 aa and to Escherichia coli hypothetical protein YecG or b1895 SWALL:YECG_ECOLI (SWALL:P46888) (142 aa) fasta scores: E(): 2.7e-28%2C 54.67 38d in 139 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P46888;product=putative universal stress protein;protein_id=CAL12622.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2778031	2778444	.	+	.	ID=id4510;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 104.8%2C E-value 1.1e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00582
AM286415.1	EMBL	gene	2778611	2779645	.	+	.	ID=gene2526;Name=YE2584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2584
AM286415.1	EMBL	CDS	2778611	2779645	.	+	0	ID=cds2454;Parent=gene2526;Dbxref=EnsemblGenomes-Gn:YE2584,EnsemblGenomes-Tr:CAL12623,GOA:A1JTA1,InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR016040,UniProtKB/TrEMBL:A1JTA1,NCBI_GP:CAL12623.1;Name=CAL12623.1;Note=Similar to many putative oxidoreductases including: Escherichia coli putative NADP-dependent oxidoreductase YncB or b1449 SWALL:YNCB_ECOLI (SWALL:P76113) (353 aa) fasta scores: E(): 1.6e-92%2C 68.89 38d in 344 aaand to Salmonella typhi putative NADP-dependent oxidoreductase Sty1476 SWALL:Q8Z742 (EMBL:AL627270) (345 aa) fasta scores: E(): 2.3e-89%2C 66.86 38d in 344 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76113;product=putative oxidoreductase;protein_id=CAL12623.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2778668	2779633	.	+	.	ID=id4511;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenase%2C score 134.1%2C E-value 1.6e-37;gbkey=misc_feature;inference=protein motif:PFAM:PF00107
AM286415.1	EMBL	gene	2779706	2782324	.	-	.	ID=gene2527;Name=mgtB;gbkey=Gene;gene=mgtB;gene_biotype=protein_coding;locus_tag=YE2585
AM286415.1	EMBL	CDS	2779706	2782324	.	-	0	ID=cds2455;Parent=gene2527;Dbxref=EnsemblGenomes-Gn:YE2585,EnsemblGenomes-Tr:CAL12624,GOA:A1JTA4,InterPro:IPR001757,InterPro:IPR004014,InterPro:IPR006068,InterPro:IPR006415,InterPro:IPR008250,InterPro:IPR018303,InterPro:IPR023214,InterPro:IPR023298,InterPro:IPR023299,UniProtKB/TrEMBL:A1JTA4,NCBI_GP:CAL12624.1;Name=CAL12624.1;gbkey=CDS;gene=mgtB;product=Mg(2+) transport ATPase protein B;protein_id=CAL12624.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2782130	2782189	.	-	.	ID=id4512;Note=8 probable transmembrane helices predicted for YE2585 by TMHMM2.0 at aa 46-65%2C 80-99%2C 259-281%2C 291-313%2C683-705%2C 743-765%2C 801-823 and 838-860;gbkey=misc_feature;gene=mgtB;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	2782028	2782087	.	-	.	ID=id4512;Note=8 probable transmembrane helices predicted for YE2585 by TMHMM2.0 at aa 46-65%2C 80-99%2C 259-281%2C 291-313%2C683-705%2C 743-765%2C 801-823 and 838-860;gbkey=misc_feature;gene=mgtB;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	2781482	2781550	.	-	.	ID=id4512;Note=8 probable transmembrane helices predicted for YE2585 by TMHMM2.0 at aa 46-65%2C 80-99%2C 259-281%2C 291-313%2C683-705%2C 743-765%2C 801-823 and 838-860;gbkey=misc_feature;gene=mgtB;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	2781386	2781454	.	-	.	ID=id4512;Note=8 probable transmembrane helices predicted for YE2585 by TMHMM2.0 at aa 46-65%2C 80-99%2C 259-281%2C 291-313%2C683-705%2C 743-765%2C 801-823 and 838-860;gbkey=misc_feature;gene=mgtB;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	2780210	2780278	.	-	.	ID=id4512;Note=8 probable transmembrane helices predicted for YE2585 by TMHMM2.0 at aa 46-65%2C 80-99%2C 259-281%2C 291-313%2C683-705%2C 743-765%2C 801-823 and 838-860;gbkey=misc_feature;gene=mgtB;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	2780030	2780098	.	-	.	ID=id4512;Note=8 probable transmembrane helices predicted for YE2585 by TMHMM2.0 at aa 46-65%2C 80-99%2C 259-281%2C 291-313%2C683-705%2C 743-765%2C 801-823 and 838-860;gbkey=misc_feature;gene=mgtB;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	2779856	2779924	.	-	.	ID=id4512;Note=8 probable transmembrane helices predicted for YE2585 by TMHMM2.0 at aa 46-65%2C 80-99%2C 259-281%2C 291-313%2C683-705%2C 743-765%2C 801-823 and 838-860;gbkey=misc_feature;gene=mgtB;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	2779745	2779813	.	-	.	ID=id4512;Note=8 probable transmembrane helices predicted for YE2585 by TMHMM2.0 at aa 46-65%2C 80-99%2C 259-281%2C 291-313%2C683-705%2C 743-765%2C 801-823 and 838-860;gbkey=misc_feature;gene=mgtB;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	2780420	2781313	.	-	.	ID=id4513;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 80.0%2C E-value 3.2e-21;gbkey=misc_feature;gene=mgtB;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	2781275	2781295	.	-	.	ID=id4514;Note=PS00154 E1-E2 ATPases phosphorylation site.;gbkey=misc_feature;gene=mgtB;inference=protein motif:Prosite:PS00154
AM286415.1	EMBL	sequence_feature	2781323	2782072	.	-	.	ID=id4515;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 253.9%2C E-value 1.4e-73;gbkey=misc_feature;gene=mgtB;inference=protein motif:PFAM:PF00122
AM286415.1	EMBL	sequence_feature	2782121	2782318	.	-	.	ID=id4516;Note=Pfam match to entry PF00690 Cation_ATPase_N%2C Cation transporter/ATPase%2C N-terminus%2C score 70.5%2C E-value 2.2e-18;gbkey=misc_feature;gene=mgtB;inference=protein motif:PFAM:PF00690
AM286415.1	EMBL	gene	2782625	2783335	.	-	.	ID=gene2528;Name=mgtC;gbkey=Gene;gene=mgtC;gene_biotype=protein_coding;locus_tag=YE2586
AM286415.1	EMBL	CDS	2782625	2783335	.	-	0	ID=cds2456;Parent=gene2528;Dbxref=EnsemblGenomes-Gn:YE2586,EnsemblGenomes-Tr:CAL12625,GOA:A1JTA9,InterPro:IPR003416,UniProtKB/TrEMBL:A1JTA9,NCBI_GP:CAL12625.1;Name=CAL12625.1;gbkey=CDS;gene=mgtC;product=Mg(2+) transport ATPase protein C;protein_id=CAL12625.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2782910	2783296	.	-	.	ID=id4517;Note=Pfam match to entry PF02308 MgtC%2C MgtC family %2Cscore 252.2%2C E-value 4.7e-73;gbkey=misc_feature;gene=mgtC;inference=protein motif:PFAM:PF02308
AM286415.1	EMBL	sequence_feature	2783258	2783326	.	-	.	ID=id4518;Note=4 probable transmembrane helices predicted for YE2586 by TMHMM2.0 at aa 4-26%2C 39-58%2C 63-82 and 94-116;gbkey=misc_feature;gene=mgtC;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2783162	2783221	.	-	.	ID=id4518;Note=4 probable transmembrane helices predicted for YE2586 by TMHMM2.0 at aa 4-26%2C 39-58%2C 63-82 and 94-116;gbkey=misc_feature;gene=mgtC;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2783090	2783149	.	-	.	ID=id4518;Note=4 probable transmembrane helices predicted for YE2586 by TMHMM2.0 at aa 4-26%2C 39-58%2C 63-82 and 94-116;gbkey=misc_feature;gene=mgtC;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2782988	2783056	.	-	.	ID=id4518;Note=4 probable transmembrane helices predicted for YE2586 by TMHMM2.0 at aa 4-26%2C 39-58%2C 63-82 and 94-116;gbkey=misc_feature;gene=mgtC;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	pseudogene	2783887	2784132	.	+	.	ID=gene2529;Name=YE2586A;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE2586A;pseudo=true
AM286415.1	EMBL	CDS	2783887	2784051	.	+	0	ID=cds2457;Parent=gene2529;Note=only remnants left due to deletion events;gbkey=CDS;product=putative CoA transferase family protein (remnant);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2784085	2784132	.	+	0	ID=cds2457;Parent=gene2529;Note=only remnants left due to deletion events;gbkey=CDS;product=putative CoA transferase family protein (remnant);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	2784461	2786200	.	+	.	ID=gene2530;Name=YE2588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2588
AM286415.1	EMBL	CDS	2784461	2786200	.	+	0	ID=cds2458;Parent=gene2530;Dbxref=EnsemblGenomes-Gn:YE2588,EnsemblGenomes-Tr:CAL12626,GOA:A1JTB3,InterPro:IPR003122,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,InterPro:IPR004091,UniProtKB/TrEMBL:A1JTB3,NCBI_GP:CAL12626.1;Name=CAL12626.1;Note=Similar to many chemotaxis proteins incuding: Escherichia coli methyl-accepting chemotaxis protein III Trg or b1421 SWALL:MCP3_ECOLI (SWALL:P05704) (546 aa) fasta scores: E(): 1.5e-94%2C 59.18 38d in 517 aa and to Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or CheM or Stm1919 SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 3.3e-66%2C 45.76 38d in 566 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P05704;product=putative methyl-accepting chemotaxis protein;protein_id=CAL12626.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2784566	2784634	.	+	.	ID=id4519;Note=2 probable transmembrane helices predicted for YE2588 by TMHMM2.0 at aa 36-58 and 215-237;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2785103	2785171	.	+	.	ID=id4519;Note=2 probable transmembrane helices predicted for YE2588 by TMHMM2.0 at aa 36-58 and 215-237;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2785118	2785327	.	+	.	ID=id4520;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 75.5%2C E-value 7e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	2785388	2786086	.	+	.	ID=id4521;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 361.0%2C E-value 8.1e-106;gbkey=misc_feature;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	sequence_feature	2785412	2785480	.	+	.	ID=id4522;Note=PS00538 Bacterial chemotaxis sensory transducers signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00538
AM286415.1	EMBL	gene	2786333	2786524	.	-	.	ID=gene2531;Name=YE2589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2589
AM286415.1	EMBL	CDS	2786333	2786524	.	-	0	ID=cds2459;Parent=gene2531;Dbxref=EnsemblGenomes-Gn:YE2589,EnsemblGenomes-Tr:CAL12627,InterPro:IPR019717,NCBI_GP:CAL12627.1;Name=CAL12627.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12627.1;transl_table=11
AM286415.1	EMBL	gene	2786778	2786990	.	-	.	ID=gene2532;Name=cspC2;gbkey=Gene;gene=cspC2;gene_biotype=protein_coding;gene_synonym=msmB;locus_tag=YE2590
AM286415.1	EMBL	CDS	2786778	2786990	.	-	0	ID=cds2460;Parent=gene2532;Dbxref=EnsemblGenomes-Gn:YE2590,EnsemblGenomes-Tr:CAL12628,GOA:A1JTB9,InterPro:IPR002059,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,InterPro:IPR019844,UniProtKB/TrEMBL:A1JTB9,NCBI_GP:CAL12628.1;Name=CAL12628.1;Note=Similar to Escherichia coli%2C Escherichia coli O157:H7%2C Salmonella typhimurium%2C and Salmonella typhi cold shock-like protein CspC cspC or msmB or b1823 or z2868 or ecs2533 or stm1837 or sty1967 SWALL:CSPC_ECOLI (SWALL:P36996) (68 aa) fasta scores: E(): 1.6e-21%2C 84.84 id in 66 aa%2C and to Yersinia pestis cold shock protein ypo1655 SWALL:Q8ZFN9 (EMBL:AJ414149) (70 aa) fasta scores: E(): 1.7e-27%2C 100 38d in 70 aa;gbkey=CDS;gene=cspC2;inference=similar to sequence:UniProtKB:P36996;product=cold shock-like protein CspC2;protein_id=CAL12628.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2786781	2786981	.	-	.	ID=id4523;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 155.7%2C E-value 5.2e-44;gbkey=misc_feature;gene=cspC2;inference=protein motif:PFAM:PF00313
AM286415.1	EMBL	sequence_feature	2786880	2786939	.	-	.	ID=id4524;Note=PS00352 'Cold-shock' DNA-binding domain signature.;gbkey=misc_feature;gene=cspC2;inference=protein motif:Prosite:PS00352
AM286415.1	EMBL	gene	2787472	2788506	.	+	.	ID=gene2533;Name=lacI;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=YE2591
AM286415.1	EMBL	CDS	2787472	2788506	.	+	0	ID=cds2461;Parent=gene2533;Dbxref=EnsemblGenomes-Gn:YE2591,EnsemblGenomes-Tr:CAL12629,GOA:A1JTC2,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JTC2,NCBI_GP:CAL12629.1;Name=CAL12629.1;gbkey=CDS;gene=lacI;product=lactose operon repressor;protein_id=CAL12629.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2787481	2787564	.	+	.	ID=id4525;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 51.5%2C E-value 1.2e-12;gbkey=misc_feature;gene=lacI;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	2787487	2787552	.	+	.	ID=id4526;Note=Predicted helix-turn-helix motif with score 1995.000%2C SD 5.98 at aa 6-27%2C sequence ATLDDVARQAGVSYQTVSRVLN;gbkey=misc_feature;gene=lacI
AM286415.1	EMBL	sequence_feature	2787493	2787549	.	+	.	ID=id4527;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=lacI;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	sequence_feature	2787658	2788464	.	+	.	ID=id4528;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 48.1%2C E-value 1.2e-11;gbkey=misc_feature;gene=lacI;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	2788683	2791835	.	+	.	ID=gene2534;Name=lacZ;gbkey=Gene;gene=lacZ;gene_biotype=protein_coding;locus_tag=YE2592
AM286415.1	EMBL	CDS	2788683	2791835	.	+	0	ID=cds2462;Parent=gene2534;Dbxref=EnsemblGenomes-Gn:YE2592,EnsemblGenomes-Tr:CAL12630,GOA:A1JTC4,InterPro:IPR004199,InterPro:IPR006101,InterPro:IPR006102,InterPro:IPR006103,InterPro:IPR006104,InterPro:IPR008979,InterPro:IPR011013,InterPro:IPR013781,InterPro:IPR013812,InterPro:IPR014718,InterPro:IPR017853,InterPro:IPR023230,InterPro:IPR023232,InterPro:IPR023933,NCBI_GP:CAL12630.1;Name=CAL12630.1;gbkey=CDS;gene=lacZ;product=beta-galactosidase;protein_id=CAL12630.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2788809	2789360	.	+	.	ID=id4529;Note=Pfam match to entry PF02837 Glyco_hydro_2_N%2CGlycosyl hydrolases family 2%2C sugar binding domain%2C score 345.0%2C E-value 5.5e-101;gbkey=misc_feature;gene=lacZ;inference=protein motif:PFAM:PF02837
AM286415.1	EMBL	sequence_feature	2789364	2789729	.	+	.	ID=id4530;Note=Pfam match to entry PF00703 Glyco_hydro_2%2C Glycosyl hydrolases family 2%2C immunoglobulin-like beta-sandwich domain%2C score 92.3%2C E-value 6.5e-25;gbkey=misc_feature;gene=lacZ;inference=protein motif:PFAM:PF00703
AM286415.1	EMBL	sequence_feature	2789733	2790617	.	+	.	ID=id4531;Note=Pfam match to entry PF02836 Glyco_hydro_2_C%2CGlycosyl hydrolases family 2%2C TIM barrel domain%2C score 598.1%2C E-value 3.5e-177;gbkey=misc_feature;gene=lacZ;inference=protein motif:PFAM:PF02836
AM286415.1	EMBL	sequence_feature	2789883	2789960	.	+	.	ID=id4532;Note=PS00719 Glycosyl hydrolases family 2 signature 1.;gbkey=misc_feature;gene=lacZ;inference=protein motif:Prosite:PS00719
AM286415.1	EMBL	sequence_feature	2790069	2790113	.	+	.	ID=id4533;Note=PS00608 Glycosyl hydrolases family 2 acid/base catalyst.;gbkey=misc_feature;gene=lacZ;inference=protein motif:Prosite:PS00608
AM286415.1	EMBL	sequence_feature	2790957	2791511	.	+	.	ID=id4534;Note=Pfam match to entry PF02929 Bgal_small_N%2C Beta galactosidase small chain%2C N terminal domain%2C score 235.9%2C E-value 3.7e-68;gbkey=misc_feature;gene=lacZ;inference=protein motif:PFAM:PF02929
AM286415.1	EMBL	sequence_feature	2791539	2791814	.	+	.	ID=id4535;Note=Pfam match to entry PF02930 Bgal_small_C%2C Beta galactosidase small chain%2C C terminal domain%2C score 137.8%2C E-value 1.3e-38;gbkey=misc_feature;gene=lacZ;inference=protein motif:PFAM:PF02930
AM286415.1	EMBL	repeat_region	2792031	2792909	.	-	.	ID=id4536;Note=IS4-like insertion sequence element IS1665;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	2792031	2792046	.	+	.	ID=id4537;Note=Inverted repeat for IS4-like element;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	stem_loop	2792032	2792063	.	-	.	ID=id4538;gbkey=stem_loop
AM286415.1	EMBL	gene	2792377	2792826	.	-	.	ID=gene2535;Name=YE2594;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2594;part=1/2
AM286415.1	EMBL	gene	2792040	2792375	.	-	.	ID=gene2535;Name=YE2594;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2594;part=2/2
AM286415.1	EMBL	CDS	2792377	2792826	.	-	0	ID=cds2463;Parent=gene2535;Dbxref=EnsemblGenomes-Gn:YE2594,EnsemblGenomes-Tr:CAL12631,InterPro:IPR024473,UniProtKB/TrEMBL:A1JTC9,NCBI_GP:CAL12631.1;Name=CAL12631.1;Note=Similar to the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 7.1e-54%2C 88.59 id in 149 aa%2C and to Shigella flexneri IS4 S0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 7.1e-54%2C 88.59 38d in 149 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting%2C following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL12631.1;transl_table=11
AM286415.1	EMBL	CDS	2792040	2792375	.	-	0	ID=cds2463;Parent=gene2535;Dbxref=EnsemblGenomes-Gn:YE2594,EnsemblGenomes-Tr:CAL12631,InterPro:IPR024473,UniProtKB/TrEMBL:A1JTC9,NCBI_GP:CAL12631.1;Name=CAL12631.1;Note=Similar to the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 7.1e-54%2C 88.59 id in 149 aa%2C and to Shigella flexneri IS4 S0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 7.1e-54%2C 88.59 38d in 149 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting%2C following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL12631.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2792370	2792376	.	-	.	ID=id4539;Note=possible site of programmed ribosomal slippage;gbkey=misc_feature
AM286415.1	EMBL	INVERTED	2792894	2792909	.	-	.	ID=id4540;Note=Inverted repeat for IS4-like element;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	2793089	2794099	.	+	.	ID=gene2536;Name=YE2595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2595
AM286415.1	EMBL	CDS	2793089	2794099	.	+	0	ID=cds2464;Parent=gene2536;Dbxref=EnsemblGenomes-Gn:YE2595,EnsemblGenomes-Tr:CAL12632,GOA:A1JTD3,InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR014189,InterPro:IPR016040,UniProtKB/TrEMBL:A1JTD3,NCBI_GP:CAL12632.1;Name=CAL12632.1;gbkey=CDS;product=probable Zinc-binding dehydrogenase;protein_id=CAL12632.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2793143	2794096	.	+	.	ID=id4541;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenase%2C score 287.2%2C E-value 1.3e-83;gbkey=misc_feature;inference=protein motif:PFAM:PF00107
AM286415.1	EMBL	sequence_feature	2794043	2794078	.	+	.	ID=id4542;Note=PS00962 Ribosomal protein S2 signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00962
AM286415.1	EMBL	gene	2794337	2794870	.	+	.	ID=gene2537;Name=ylaC;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=YE2596
AM286415.1	EMBL	CDS	2794337	2794870	.	+	0	ID=cds2465;Parent=gene2537;Dbxref=EnsemblGenomes-Gn:YE2596,EnsemblGenomes-Tr:CAL12633,InterPro:IPR019713,UniProtKB/TrEMBL:A1JTD5,NCBI_GP:CAL12633.1;Name=CAL12633.1;gbkey=CDS;gene=ylaC;product=putative membrane protein;protein_id=CAL12633.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2794427	2794495	.	+	.	ID=id4543;Note=2 probable transmembrane helices predicted for YE2596 by TMHMM2.0 at aa 31-53 and 58-80;gbkey=misc_feature;gene=ylaC;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2794508	2794576	.	+	.	ID=id4543;Note=2 probable transmembrane helices predicted for YE2596 by TMHMM2.0 at aa 31-53 and 58-80;gbkey=misc_feature;gene=ylaC;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	2795126	2795584	.	+	.	ID=gene2538;Name=YE2597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2597
AM286415.1	EMBL	CDS	2795126	2795584	.	+	0	ID=cds2466;Parent=gene2538;Dbxref=EnsemblGenomes-Gn:YE2597,EnsemblGenomes-Tr:CAL12634,GOA:A1JTD8,InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,InterPro:IPR019887,InterPro:IPR019888,UniProtKB/TrEMBL:A1JTD8,NCBI_GP:CAL12634.1;Name=CAL12634.1;gbkey=CDS;product=AsnC-family transcriptional regulatory protein;protein_id=CAL12634.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2795177	2795242	.	+	.	ID=id4544;Note=Predicted helix-turn-helix motif with score 1103.000%2C SD 2.94 at aa 18-39%2C sequence ISLKDLSQQVNLSSPSTSERLR;gbkey=misc_feature
AM286415.1	EMBL	sequence_feature	2795198	2795500	.	+	.	ID=id4545;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 39.5%2C E-value 5.1e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF01037
AM286415.1	EMBL	gene	2795739	2796566	.	+	.	ID=gene2539;Name=YE2598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2598
AM286415.1	EMBL	CDS	2795739	2796566	.	+	0	ID=cds2467;Parent=gene2539;Dbxref=EnsemblGenomes-Gn:YE2598,EnsemblGenomes-Tr:CAL12635,InterPro:IPR021266,UniProtKB/TrEMBL:A1JTE0,NCBI_GP:CAL12635.1;Name=CAL12635.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12635.1;transl_table=11
AM286415.1	EMBL	gene	2796772	2796984	.	+	.	ID=gene2540;Name=YE2599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2599
AM286415.1	EMBL	CDS	2796772	2796984	.	+	0	ID=cds2468;Parent=gene2540;Dbxref=EnsemblGenomes-Gn:YE2599,EnsemblGenomes-Tr:CAL12636,InterPro:IPR017704,UniProtKB/TrEMBL:A1JTE1,NCBI_GP:CAL12636.1;Name=CAL12636.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12636.1;transl_table=11
AM286415.1	EMBL	gene	2797251	2798576	.	-	.	ID=gene2541;Name=YE2600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2600
AM286415.1	EMBL	CDS	2797251	2798576	.	-	0	ID=cds2469;Parent=gene2541;Dbxref=EnsemblGenomes-Gn:YE2600,EnsemblGenomes-Tr:CAL12637,GOA:A1JTE2,InterPro:IPR000560,InterPro:IPR029033,UniProtKB/TrEMBL:A1JTE2,NCBI_GP:CAL12637.1;Name=CAL12637.1;gbkey=CDS;product=probable histidine acid phosphatase;protein_id=CAL12637.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2797332	2798477	.	-	.	ID=id4546;Note=Pfam match to entry PF00328 acid_phosphat%2CHistidine acid phosphatase%2C score 123.9%2C E-value 1.9e-34;gbkey=misc_feature;inference=protein motif:PFAM:PF00328
AM286415.1	EMBL	sequence_feature	2798427	2798471	.	-	.	ID=id4547;Note=PS00616 Histidine acid phosphatases phosphohistidine signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00616
AM286415.1	EMBL	sequence_feature	2798451	2798480	.	-	.	ID=id4548;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	2798490	2798558	.	-	.	ID=id4549;Note=1 probable transmembrane helix predicted for YE2600 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	2798520	2798552	.	-	.	ID=id4550;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2798907	2800184	.	+	.	ID=gene2542;Name=glgC2;gbkey=Gene;gene=glgC2;gene_biotype=protein_coding;locus_tag=YE2601
AM286415.1	EMBL	CDS	2798907	2800184	.	+	0	ID=cds2470;Parent=gene2542;Dbxref=EnsemblGenomes-Gn:YE2601,EnsemblGenomes-Tr:CAL12638,GOA:A1JTE3,InterPro:IPR005835,InterPro:IPR005836,InterPro:IPR011004,InterPro:IPR011831,InterPro:IPR023049,InterPro:IPR029044,UniProtKB/TrEMBL:A1JTE3,NCBI_GP:CAL12638.1;Name=CAL12638.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 glucose-1-phosphate adenylyltransferase GlgC or b3430 or z4792 or ecs4275 SWALL:GLGC_ECOLI (SWALL:P00584) (430 aa) fasta scores: E(): 1.4e-136%2C 77.98 38d in 418 aa%2CSalmonella typhimurium glucose-1-phosphate adenylyltransferase GlgC or Stm3536 SWALL:GLGC_SALTY (SWALL:P05415) (431 aa) fasta scores: E(): 1.3e-135%2C78.46 38d in 418 aa and Yersinia pestis glucose-1-phosphate adenylyltransferase GlgC or Ypo3940 SWALL:Q8ZA77 (EMBL:AJ414159) (476 aa) fasta scores: E(): 6.6e-134%2C 76.84 38d in 406 aa. Also highly similar to YE4011%2C glgcC%2C 77.590 38dentity in 415 aa.This CDS appears to be a paralogue of YE4011;gbkey=CDS;gene=glgC2;inference=similar to sequence:UniProtKB:P05415;product=glucose-1-phosphate adenylyltransferase;protein_id=CAL12638.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2798967	2799785	.	+	.	ID=id4551;Note=Pfam match to entry PF00483 NTP_transferase%2CNucleotidyl transferase%2C score 302.6%2C E-value 3.2e-88;gbkey=misc_feature;gene=glgC2;inference=protein motif:PFAM:PF00483
AM286415.1	EMBL	sequence_feature	2798982	2799041	.	+	.	ID=id4552;Note=PS00808 ADP-glucose pyrophosphorylase signature 1.;gbkey=misc_feature;gene=glgC2;inference=protein motif:Prosite:PS00808
AM286415.1	EMBL	sequence_feature	2799243	2799269	.	+	.	ID=id4553;Note=PS00809 ADP-glucose pyrophosphorylase signature 2.;gbkey=misc_feature;gene=glgC2;inference=protein motif:Prosite:PS00809
AM286415.1	EMBL	sequence_feature	2799537	2799569	.	+	.	ID=id4554;Note=PS00810 ADP-glucose pyrophosphorylase signature 3.;gbkey=misc_feature;gene=glgC2;inference=protein motif:Prosite:PS00810
AM286415.1	EMBL	sequence_feature	2799663	2799695	.	+	.	ID=id4555;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=glgC2;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2799888	2799920	.	+	.	ID=id4556;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=glgC2;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2800444	2800956	.	-	.	ID=gene2543;Name=YE2602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2602
AM286415.1	EMBL	CDS	2800444	2800956	.	-	0	ID=cds2471;Parent=gene2543;Dbxref=EnsemblGenomes-Gn:YE2602,EnsemblGenomes-Tr:CAL12639,GOA:A1JTE4,InterPro:IPR008962,InterPro:IPR016147,InterPro:IPR016148,UniProtKB/TrEMBL:A1JTE4,NCBI_GP:CAL12639.1;Name=CAL12639.1;Note=Similar to Yersinia pestis putative fimbrial chaperone Ypo0303 SWALL:Q8ZJ26 (EMBL:AJ414142) (247 aa) fasta scores: E(): 4.5e-50%2C 81.17 38d in 170 aa and to Salmonella typhimurium putative fimbrial chaparone protein StjC or Stm4573 SWALL:Q8ZJV4 (EMBL:AE008915) (235 aa) fasta scores: E(): 5.2e-14%2C 34.1 38d in 173 aa. This gene is a possible gene fragment;gbkey=CDS;inference=similar to sequence:INSDC:AJ414142;product=putative fimbrial chaperone;protein_id=CAL12639.1;transl_table=11
AM286415.1	EMBL	gene	2801295	2802812	.	+	.	ID=gene2544;Name=YE2603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2603
AM286415.1	EMBL	CDS	2801295	2802812	.	+	0	ID=cds2472;Parent=gene2544;Dbxref=EnsemblGenomes-Gn:YE2603,EnsemblGenomes-Tr:CAL12640,GOA:A1JTE5,InterPro:IPR018483,InterPro:IPR018484,InterPro:IPR018485,UniProtKB/TrEMBL:A1JTE5,NCBI_GP:CAL12640.1;Name=CAL12640.1;Note=Similar to many kinases including: Pasteurella multocida probable L-xylulose kinase Lyx or Pm1247 SWALL:LYXK_PASMU (SWALL:P57928) (483 aa) fasta scores: E(): 4e-44%2C 29.97 38d in 487 aa%2C Lactobacillus pentosus xylulose kinase XylB SWALL:XYLB_LACPE (SWALL:P21939) (501 aa) fasta scores: E(): 1.1e-41%2C 30.28 38d in 492 aa and Haemophilus influenzae probable L-xylulose kinase Lyx or LyxK or Sgbk or hi1027 SWALL:LYXK_HAEIN (SWALL:P44991) (485 aa) fasta scores: E(): 1.1e-40%2C 29.89 38d in 495 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P57928;product=putative sugar kinase;protein_id=CAL12640.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2801301	2802041	.	+	.	ID=id4557;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C N-terminal domain%2C score 243.3%2CE-value 2.2e-70;gbkey=misc_feature;inference=protein motif:PFAM:PF00370
AM286415.1	EMBL	sequence_feature	2802048	2802695	.	+	.	ID=id4558;Note=Pfam match to entry PF02782 FGGY_C%2C FGGY family of carbohydrate kinases%2C C-terminal domain%2C score 93.2%2CE-value 3.5e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF02782
AM286415.1	EMBL	sequence_feature	2802360	2802422	.	+	.	ID=id4559;Note=PS00445 FGGY family of carbohydrate kinases signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00445
AM286415.1	EMBL	gene	2802809	2803825	.	+	.	ID=gene2545;Name=YE2604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2604
AM286415.1	EMBL	CDS	2802809	2803825	.	+	0	ID=cds2473;Parent=gene2545;Dbxref=EnsemblGenomes-Gn:YE2604,EnsemblGenomes-Tr:CAL12641,GOA:A1JTE6,InterPro:IPR006139,InterPro:IPR006140,InterPro:IPR016040,UniProtKB/TrEMBL:A1JTE6,NCBI_GP:CAL12641.1;Name=CAL12641.1;Note=Similar in parts to several dehydrogenases including: Synechocystis sp. D-3-phosphoglycerate dehydrogenase SerA or Sll1908 SWALL:SERA_SYNY3 (SWALL:P73821) (554 aa) fasta scores: E(): 6.4e-23%2C 37.26 id in 322 aa and Methanobacterium thermoautotrophicum D-3-phosphoglycerate dehydrogenase Mth970 SWALL:SERA_METTH (SWALL:O27051) (525 aa) fasta scores: E(): 5e-21%2C 38.56 id in 293 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P73821;product=putative oxidoreductase;protein_id=CAL12641.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2802845	2803099	.	+	.	ID=id4560;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain %2Cscore 56.4%2C E-value 3.9e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00389
AM286415.1	EMBL	sequence_feature	2803103	2803720	.	+	.	ID=id4561;Note=Pfam match to entry PF02826 2-Hacid_DH_C%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain %2Cscore 197.3%2C E-value 1.6e-56;gbkey=misc_feature;inference=protein motif:PFAM:PF02826
AM286415.1	EMBL	gene	2803850	2804794	.	-	.	ID=gene2546;Name=YE2605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2605
AM286415.1	EMBL	CDS	2803850	2804794	.	-	0	ID=cds2474;Parent=gene2546;Dbxref=EnsemblGenomes-Gn:YE2605,EnsemblGenomes-Tr:CAL12642,GOA:A1JTE7,InterPro:IPR011611,InterPro:IPR029056,UniProtKB/TrEMBL:A1JTE7,NCBI_GP:CAL12642.1;Name=CAL12642.1;gbkey=CDS;product=putative sugar kinase;protein_id=CAL12642.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2803895	2804788	.	-	.	ID=id4562;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 166.1%2C E-value 4e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF00294
AM286415.1	EMBL	gene	2804804	2805805	.	-	.	ID=gene2547;Name=YE2606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2606
AM286415.1	EMBL	CDS	2804804	2805805	.	-	0	ID=cds2475;Parent=gene2547;Dbxref=EnsemblGenomes-Gn:YE2606,EnsemblGenomes-Tr:CAL12643,GOA:A1JTE8,InterPro:IPR001851,UniProtKB/TrEMBL:A1JTE8,NCBI_GP:CAL12643.1;Name=CAL12643.1;Note=Similar to many sugar permeases including: Bacillus subtilis ribose transport system permease protein RbsC SWALL:RBSC_BACSU (SWALL:P36948) (322 aa) fasta scores: E(): 1.3e-27%2C 35.52 38d in 304 aa and to Yersinia pestis ribose transport system%2C permease protein Ypo1553 SWALL:Q8ZFX0 (EMBL:AJ414149) (331 aa) fasta scores: E(): 3.1e-28%2C 31.83 38d in 311 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P36948;product=putative sugar permease;protein_id=CAL12643.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2805542	2805646	.	-	.	ID=id4563;Note=7 probable transmembrane helices predicted for YE2606 by TMHMM2.0 at aa 12-34%2C 54-88%2C 100-122%2C 168-190%2C219-238%2C 248-267and 279-301;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	2805440	2805508	.	-	.	ID=id4563;Note=7 probable transmembrane helices predicted for YE2606 by TMHMM2.0 at aa 12-34%2C 54-88%2C 100-122%2C 168-190%2C219-238%2C 248-267and 279-301;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	2805236	2805304	.	-	.	ID=id4563;Note=7 probable transmembrane helices predicted for YE2606 by TMHMM2.0 at aa 12-34%2C 54-88%2C 100-122%2C 168-190%2C219-238%2C 248-267and 279-301;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	2805092	2805151	.	-	.	ID=id4563;Note=7 probable transmembrane helices predicted for YE2606 by TMHMM2.0 at aa 12-34%2C 54-88%2C 100-122%2C 168-190%2C219-238%2C 248-267and 279-301;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	2805005	2805064	.	-	.	ID=id4563;Note=7 probable transmembrane helices predicted for YE2606 by TMHMM2.0 at aa 12-34%2C 54-88%2C 100-122%2C 168-190%2C219-238%2C 248-267and 279-301;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	2804903	2804971	.	-	.	ID=id4563;Note=7 probable transmembrane helices predicted for YE2606 by TMHMM2.0 at aa 12-34%2C 54-88%2C 100-122%2C 168-190%2C219-238%2C 248-267and 279-301;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	2804849	2804893	.	-	.	ID=id4563;Note=7 probable transmembrane helices predicted for YE2606 by TMHMM2.0 at aa 12-34%2C 54-88%2C 100-122%2C 168-190%2C219-238%2C 248-267and 279-301;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	2805814	2806830	.	-	.	ID=gene2548;Name=YE2607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2607
AM286415.1	EMBL	CDS	2805814	2806830	.	-	0	ID=cds2476;Parent=gene2548;Dbxref=EnsemblGenomes-Gn:YE2607,EnsemblGenomes-Tr:CAL12644,GOA:A1JTE9,InterPro:IPR001851,UniProtKB/TrEMBL:A1JTE9,NCBI_GP:CAL12644.1;Name=CAL12644.1;Note=Similar to Bacillus subtilis ribose transport system permease protein RbsC SWALL:RBSC_BACSU (SWALL:P36948) (322 aa) fasta scores: E(): 3.8e-20%2C 31.83 id in 311 aa and to Rhizobium loti permease protein%2C sugar ABC transporter mlr3338 SWALL:Q98GG7 (EMBL:AP003001) (322 aa) fasta scores: E(): 4e-21%2C 30.94 38d in 307 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P36948;product=putative membrane permease protein;protein_id=CAL12644.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2806675	2806743	.	-	.	ID=id4564;Note=9 probable transmembrane helices predicted for YE2607 by TMHMM2.0 at aa 30-52%2C 57-79%2C 83-104%2C 117-139%2C144-161%2C 182-204%2C 231-253%2C 285-307 and 312-334;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	2806594	2806662	.	-	.	ID=id4564;Note=9 probable transmembrane helices predicted for YE2607 by TMHMM2.0 at aa 30-52%2C 57-79%2C 83-104%2C 117-139%2C144-161%2C 182-204%2C 231-253%2C 285-307 and 312-334;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	2806519	2806584	.	-	.	ID=id4564;Note=9 probable transmembrane helices predicted for YE2607 by TMHMM2.0 at aa 30-52%2C 57-79%2C 83-104%2C 117-139%2C144-161%2C 182-204%2C 231-253%2C 285-307 and 312-334;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	2806414	2806482	.	-	.	ID=id4564;Note=9 probable transmembrane helices predicted for YE2607 by TMHMM2.0 at aa 30-52%2C 57-79%2C 83-104%2C 117-139%2C144-161%2C 182-204%2C 231-253%2C 285-307 and 312-334;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	2806348	2806401	.	-	.	ID=id4564;Note=9 probable transmembrane helices predicted for YE2607 by TMHMM2.0 at aa 30-52%2C 57-79%2C 83-104%2C 117-139%2C144-161%2C 182-204%2C 231-253%2C 285-307 and 312-334;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	2806219	2806287	.	-	.	ID=id4564;Note=9 probable transmembrane helices predicted for YE2607 by TMHMM2.0 at aa 30-52%2C 57-79%2C 83-104%2C 117-139%2C144-161%2C 182-204%2C 231-253%2C 285-307 and 312-334;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	2806072	2806140	.	-	.	ID=id4564;Note=9 probable transmembrane helices predicted for YE2607 by TMHMM2.0 at aa 30-52%2C 57-79%2C 83-104%2C 117-139%2C144-161%2C 182-204%2C 231-253%2C 285-307 and 312-334;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	2805910	2805978	.	-	.	ID=id4564;Note=9 probable transmembrane helices predicted for YE2607 by TMHMM2.0 at aa 30-52%2C 57-79%2C 83-104%2C 117-139%2C144-161%2C 182-204%2C 231-253%2C 285-307 and 312-334;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	2805829	2805897	.	-	.	ID=id4564;Note=9 probable transmembrane helices predicted for YE2607 by TMHMM2.0 at aa 30-52%2C 57-79%2C 83-104%2C 117-139%2C144-161%2C 182-204%2C 231-253%2C 285-307 and 312-334;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	2806081	2806254	.	-	.	ID=id4565;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score 17.5%2C E-value 2.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	gene	2806827	2808395	.	-	.	ID=gene2549;Name=YE2608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2608
AM286415.1	EMBL	CDS	2806827	2808395	.	-	0	ID=cds2477;Parent=gene2549;Dbxref=EnsemblGenomes-Gn:YE2608,EnsemblGenomes-Tr:CAL12645,GOA:A1JTF0,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTF0,NCBI_GP:CAL12645.1;Name=CAL12645.1;Note=Similar to many including: Bacillus subtilis ribose transport ATP-binding protein RbsA SWALL:RBSA_BACSU (SWALL:P36947) (493 aa) fasta scores: E(): 1e-56%2C 37.04 id in 494 aa%2C Yersinia pestis putative sugar transport system%2C ATP-binding protein RbsA or Ypo2500 SWALL:Q8ZDQ6 (EMBL:AJ414152) (496 aa) fasta scores: E(): 9.7e-58%2C39.36 38d in 503 aa and Escherichia coli O157:H7 putative ATP-binding protein of ribose ABC transport system z5691 or ecs5073 SWALL:Q8X5Q4 (EMBL:AE005642) (517 aa) fasta scores: E(): 2.7e-57%2C 39.52 38d in 506 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P36947;product=putative sugar transport%2C ATP-binding protein;protein_id=CAL12645.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2806941	2807519	.	-	.	ID=id4566;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 103.2%2C E-value 3.3e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2807124	2807168	.	-	.	ID=id4567;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2807709	2808278	.	-	.	ID=id4568;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 166.6%2C E-value 2.7e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2808234	2808257	.	-	.	ID=id4569;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2808400	2809392	.	-	.	ID=gene2550;Name=YE2609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2609
AM286415.1	EMBL	CDS	2808400	2809392	.	-	0	ID=cds2478;Parent=gene2550;Dbxref=EnsemblGenomes-Gn:YE2609,EnsemblGenomes-Tr:CAL12646,InterPro:IPR025997,InterPro:IPR028082,UniProtKB/TrEMBL:A1JTF1,NCBI_GP:CAL12646.1;Name=CAL12646.1;Note=Similar to many sugar transport proteins including: Escherichia coli O157:H7 putative periplasmic ribose-binding protein of ABC transport system z5689 or ecs5071 SWALL:Q8X5Q6 (EMBL:AE005642) (313 aa) fasta scores: E(): 2.3e-10%2C 28.7 38d in 317 aa%2C Rhizobium meliloti putative rhizopine-binding protein precursor MocB SWALL:MOCB_RHIME (SWALL:P49308) (309 aa) fasta scores: E(): 0.0001%2C 26.86 38d in 309 aa and Bacillus subtilis D-ribose-binding protein precursor RbsB SWALL:RBSB_BACSU (SWALL:P36949) (305 aa) fasta scores: E(): 0.00012%2C 25.99 id in 277 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P49308;product=ABC transporter%2C substrate binding component;protein_id=CAL12646.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2808451	2809287	.	-	.	ID=id4570;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score -35.8%2C E-value 0.0028;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	sequence_feature	2809279	2809302	.	-	.	ID=id4571;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2809929	2810732	.	+	.	ID=gene2551;Name=YE2610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2610
AM286415.1	EMBL	CDS	2809929	2810732	.	+	0	ID=cds2479;Parent=gene2551;Dbxref=EnsemblGenomes-Gn:YE2610,EnsemblGenomes-Tr:CAL12647,GOA:A1JTF2,InterPro:IPR010384,InterPro:IPR024079,NCBI_GP:CAL12647.1;Name=CAL12647.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12647.1;transl_table=11
AM286415.1	EMBL	gene	2810915	2810990	.	+	.	ID=gene2552;Name=tRNA-Asn (GTT);gbkey=Gene;gene=tRNA-Asn (GTT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2810915	2810990	.	+	.	ID=rna98;Parent=gene2552;gbkey=tRNA;gene=tRNA-Asn (GTT);product=tRNA-Asn
AM286415.1	EMBL	exon	2810915	2810990	.	+	.	ID=id4572;Parent=rna98;gbkey=tRNA;gene=tRNA-Asn (GTT);product=tRNA-Asn
AM286415.1	EMBL	repeat_region	2810975	2810991	.	+	.	ID=id4573;Note=Direct repeat flanking High Pathogenicity island YP-HPI%2C partial tRNA%2C 17mer;gbkey=repeat_region
AM286415.1	EMBL	sequence_feature	2810992	2854110	.	+	.	ID=id4574;Note=Pathogenicity island YP-HPI. Note for the accurate mapping of the borders of this HPI please refer to Carniel et al.%2C 1996 J. Bact. 178(23): 6743-6751.;gbkey=misc_feature;standard_name=HPI
AM286415.1	EMBL	pseudogene	2811152	2812414	.	+	.	ID=gene2553;Name=int;gbkey=Gene;gene=int;gene_biotype=pseudogene;locus_tag=YE2611;pseudo=true
AM286415.1	EMBL	CDS	2811152	2812414	.	+	0	ID=cds2480;Parent=gene2553;gbkey=CDS;gene=int;product=integrase (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2811758	2812315	.	+	.	ID=id4575;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 147.0%2C E-value 2.2e-41;gbkey=misc_feature;gene=int;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	2812607	2813911	.	-	.	ID=gene2554;Name=ybtS;gbkey=Gene;gene=ybtS;gene_biotype=protein_coding;gene_synonym=irp9;locus_tag=YE2612
AM286415.1	EMBL	CDS	2812607	2813911	.	-	0	ID=cds2481;Parent=gene2554;Dbxref=EnsemblGenomes-Gn:YE2612,EnsemblGenomes-Tr:CAL12649,GOA:A1JTF3,InterPro:IPR005801,InterPro:IPR015890,InterPro:IPR019996,UniProtKB/TrEMBL:A1JTF3,NCBI_GP:CAL12649.1;Name=CAL12649.1;gbkey=CDS;gene=ybtS;product=putative salicylate synthetase;protein_id=CAL12649.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2812616	2813401	.	-	.	ID=id4576;Note=Pfam match to entry PF00425 chorismate_bind%2Cchorismate binding enzyme%2C score 160.4%2C E-value 2e-45;gbkey=misc_feature;gene=ybtS;inference=protein motif:PFAM:PF00425
AM286415.1	EMBL	gene	2813939	2815219	.	-	.	ID=gene2555;Name=ybtX;gbkey=Gene;gene=ybtX;gene_biotype=protein_coding;gene_synonym=irp8;locus_tag=YE2613
AM286415.1	EMBL	CDS	2813939	2815219	.	-	0	ID=cds2482;Parent=gene2555;Dbxref=EnsemblGenomes-Gn:YE2613,EnsemblGenomes-Tr:CAL12650,GOA:A1JTF4,InterPro:IPR011701,InterPro:IPR016196,UniProtKB/TrEMBL:A1JTF4,NCBI_GP:CAL12650.1;Name=CAL12650.1;gbkey=CDS;gene=ybtX;product=putative signal transducer;protein_id=CAL12650.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2815124	2815183	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2815013	2815081	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2814884	2814952	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2814788	2814856	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2814683	2814751	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2814602	2814670	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2814446	2814514	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2814350	2814418	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2814263	2814331	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2814152	2814220	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2814065	2814133	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2813984	2814052	.	-	.	ID=id4577;Note=12 probable transmembrane helices predicted for YE2613 by TMHMM2.0 at aa 13-32%2C 47-69%2C 90-112%2C 122-144%2C157-179%2C 184-206%2C 236-258%2C 268-290%2C 297-319%2C 334-356%2C363-385 and 390-412;gbkey=misc_feature;gene=ybtX;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	2814191	2814223	.	-	.	ID=id4578;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ybtX;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2815212	2817014	.	-	.	ID=gene2556;Name=ybtQ;gbkey=Gene;gene=ybtQ;gene_biotype=protein_coding;gene_synonym=irp7;locus_tag=YE2614
AM286415.1	EMBL	CDS	2815212	2817014	.	-	0	ID=cds2483;Parent=gene2556;Dbxref=EnsemblGenomes-Gn:YE2614,EnsemblGenomes-Tr:CAL12651,GOA:A1JTF5,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTF5,NCBI_GP:CAL12651.1;Name=CAL12651.1;gbkey=CDS;gene=ybtQ;product=inner membrane ABC-transporter YbtQ;protein_id=CAL12651.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2815350	2815904	.	-	.	ID=id4579;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 188.9%2C E-value 5.2e-54;gbkey=misc_feature;gene=ybtQ;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2815527	2815571	.	-	.	ID=id4580;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=ybtQ;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2815860	2815883	.	-	.	ID=id4581;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ybtQ;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2816064	2816927	.	-	.	ID=id4582;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score -13.2%2C E-value 0.0012;gbkey=misc_feature;gene=ybtQ;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	2816847	2816915	.	-	.	ID=id4583;Note=5 probable transmembrane helices predicted for YE2614 by TMHMM2.0 at aa 34-56%2C 66-88%2C 139-161%2C 165-187 and 273-295;gbkey=misc_feature;gene=ybtQ;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2816751	2816819	.	-	.	ID=id4583;Note=5 probable transmembrane helices predicted for YE2614 by TMHMM2.0 at aa 34-56%2C 66-88%2C 139-161%2C 165-187 and 273-295;gbkey=misc_feature;gene=ybtQ;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2816532	2816600	.	-	.	ID=id4583;Note=5 probable transmembrane helices predicted for YE2614 by TMHMM2.0 at aa 34-56%2C 66-88%2C 139-161%2C 165-187 and 273-295;gbkey=misc_feature;gene=ybtQ;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2816454	2816522	.	-	.	ID=id4583;Note=5 probable transmembrane helices predicted for YE2614 by TMHMM2.0 at aa 34-56%2C 66-88%2C 139-161%2C 165-187 and 273-295;gbkey=misc_feature;gene=ybtQ;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2816130	2816198	.	-	.	ID=id4583;Note=5 probable transmembrane helices predicted for YE2614 by TMHMM2.0 at aa 34-56%2C 66-88%2C 139-161%2C 165-187 and 273-295;gbkey=misc_feature;gene=ybtQ;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	2816865	2816897	.	-	.	ID=id4584;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ybtQ;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2817001	2818803	.	-	.	ID=gene2557;Name=ybtP;gbkey=Gene;gene=ybtP;gene_biotype=protein_coding;gene_synonym=irp6;locus_tag=YE2615
AM286415.1	EMBL	CDS	2817001	2818803	.	-	0	ID=cds2484;Parent=gene2557;Dbxref=EnsemblGenomes-Gn:YE2615,EnsemblGenomes-Tr:CAL12652,GOA:A1JTF6,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTF6,NCBI_GP:CAL12652.1;Name=CAL12652.1;gbkey=CDS;gene=ybtP;product=lipoprotein inner membrane ABC-transporter;protein_id=CAL12652.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2817142	2817696	.	-	.	ID=id4585;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 184.7%2C E-value 9.8e-53;gbkey=misc_feature;gene=ybtP;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2817319	2817363	.	-	.	ID=id4586;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=ybtP;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2817652	2817675	.	-	.	ID=id4587;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ybtP;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2818657	2818725	.	-	.	ID=id4588;Note=6 probable transmembrane helices predicted for YE2615 by TMHMM2.0 at aa 27-49%2C 64-82%2C 143-162%2C 166-184%2C251-273 and 283-305;gbkey=misc_feature;gene=ybtP;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2818558	2818614	.	-	.	ID=id4588;Note=6 probable transmembrane helices predicted for YE2615 by TMHMM2.0 at aa 27-49%2C 64-82%2C 143-162%2C 166-184%2C251-273 and 283-305;gbkey=misc_feature;gene=ybtP;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2818318	2818377	.	-	.	ID=id4588;Note=6 probable transmembrane helices predicted for YE2615 by TMHMM2.0 at aa 27-49%2C 64-82%2C 143-162%2C 166-184%2C251-273 and 283-305;gbkey=misc_feature;gene=ybtP;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2818252	2818308	.	-	.	ID=id4588;Note=6 probable transmembrane helices predicted for YE2615 by TMHMM2.0 at aa 27-49%2C 64-82%2C 143-162%2C 166-184%2C251-273 and 283-305;gbkey=misc_feature;gene=ybtP;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2817985	2818053	.	-	.	ID=id4588;Note=6 probable transmembrane helices predicted for YE2615 by TMHMM2.0 at aa 27-49%2C 64-82%2C 143-162%2C 166-184%2C251-273 and 283-305;gbkey=misc_feature;gene=ybtP;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2817889	2817957	.	-	.	ID=id4588;Note=6 probable transmembrane helices predicted for YE2615 by TMHMM2.0 at aa 27-49%2C 64-82%2C 143-162%2C 166-184%2C251-273 and 283-305;gbkey=misc_feature;gene=ybtP;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	2817907	2818734	.	-	.	ID=id4589;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 69.5%2C E-value 4.6e-18;gbkey=misc_feature;gene=ybtP;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	2818585	2818617	.	-	.	ID=id4590;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ybtP;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2819095	2820054	.	+	.	ID=gene2558;Name=ybtA;gbkey=Gene;gene=ybtA;gene_biotype=protein_coding;locus_tag=YE2616
AM286415.1	EMBL	CDS	2819095	2820054	.	+	0	ID=cds2485;Parent=gene2558;Dbxref=EnsemblGenomes-Gn:YE2616,EnsemblGenomes-Tr:CAL12653,GOA:A1JTF7,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR020449,UniProtKB/TrEMBL:A1JTF7,NCBI_GP:CAL12653.1;Name=CAL12653.1;gbkey=CDS;gene=ybtA;product=transcriptional regulator YbtA;protein_id=CAL12653.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2819758	2819835	.	+	.	ID=id4591;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 2.5%2C E-value 3.1;gbkey=misc_feature;gene=ybtA;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	2819902	2820030	.	+	.	ID=id4592;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=ybtA;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	2819914	2820045	.	+	.	ID=id4593;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 39.3%2C E-value 5.8e-09;gbkey=misc_feature;gene=ybtA;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	2820259	2826366	.	+	.	ID=gene2559;Name=irp2;gbkey=Gene;gene=irp2;gene_biotype=protein_coding;locus_tag=YE2617
AM286415.1	EMBL	CDS	2820259	2826366	.	+	0	ID=cds2486;Parent=gene2559;Dbxref=EnsemblGenomes-Gn:YE2617,EnsemblGenomes-Tr:CAL12654,GOA:P48633,InterPro:IPR000873,InterPro:IPR001242,InterPro:IPR006162,InterPro:IPR009081,InterPro:IPR010071,InterPro:IPR013217,InterPro:IPR013624,InterPro:IPR020845,InterPro:IPR025110,InterPro:IPR029063,NCBI_GP:CAL12654.1;Name=CAL12654.1;gbkey=CDS;gene=irp2;product=yersiniabactin biosynthetic protein;protein_id=CAL12654.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2820322	2820519	.	+	.	ID=id4594;Note=Pfam match to entry PF00550 pp-binding%2CPhosphopantetheine attachment site%2C score 14.8%2C E-value 0.0012;gbkey=misc_feature;gene=irp2;inference=protein motif:PFAM:PF00550
AM286415.1	EMBL	sequence_feature	2820397	2820444	.	+	.	ID=id4595;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=irp2;inference=protein motif:Prosite:PS00012
AM286415.1	EMBL	sequence_feature	2820589	2821488	.	+	.	ID=id4596;Note=Pfam match to entry PF00668 Condensation%2CCondensation domain%2C score 267.0%2C E-value 1.6e-77;gbkey=misc_feature;gene=irp2;inference=protein motif:PFAM:PF00668
AM286415.1	EMBL	sequence_feature	2820643	2820675	.	+	.	ID=id4597;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=irp2;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2821522	2821545	.	+	.	ID=id4598;Note=PS00256 Adipokinetic hormone family signature.;gbkey=misc_feature;gene=irp2;inference=protein motif:Prosite:PS00256
AM286415.1	EMBL	sequence_feature	2822035	2823228	.	+	.	ID=id4599;Note=Pfam match to entry PF00501 AMP-binding%2CAMP-binding enzyme%2C score 468.1%2C E-value 4.8e-138;gbkey=misc_feature;gene=irp2;inference=protein motif:PFAM:PF00501
AM286415.1	EMBL	sequence_feature	2822383	2822418	.	+	.	ID=id4600;Note=PS00455 Putative AMP-binding domain signature.;gbkey=misc_feature;gene=irp2;inference=protein motif:Prosite:PS00455
AM286415.1	EMBL	sequence_feature	2824489	2824680	.	+	.	ID=id4601;Note=Pfam match to entry PF00550 pp-binding%2CPhosphopantetheine attachment site%2C score 42.2%2C E-value 7.6e-10;gbkey=misc_feature;gene=irp2;inference=protein motif:PFAM:PF00550
AM286415.1	EMBL	sequence_feature	2824732	2825604	.	+	.	ID=id4602;Note=Pfam match to entry PF00668 Condensation%2CCondensation domain%2C score 267.9%2C E-value 8.8e-78;gbkey=misc_feature;gene=irp2;inference=protein motif:PFAM:PF00668
AM286415.1	EMBL	sequence_feature	2826106	2826297	.	+	.	ID=id4603;Note=Pfam match to entry PF00550 pp-binding%2CPhosphopantetheine attachment site%2C score 19.1%2C E-value 7.5e-05;gbkey=misc_feature;gene=irp2;inference=protein motif:PFAM:PF00550
AM286415.1	EMBL	gene	2826454	2835939	.	+	.	ID=gene2560;Name=irp1;gbkey=Gene;gene=irp1;gene_biotype=protein_coding;locus_tag=YE2618
AM286415.1	EMBL	CDS	2826454	2835939	.	+	0	ID=cds2487;Parent=gene2560;Dbxref=EnsemblGenomes-Gn:YE2618,EnsemblGenomes-Tr:CAL12655,GOA:A1JTF9,InterPro:IPR001031,InterPro:IPR001227,InterPro:IPR001242,InterPro:IPR006162,InterPro:IPR009081,InterPro:IPR013217,InterPro:IPR013624,InterPro:IPR013968,InterPro:IPR014030,InterPro:IPR014031,InterPro:IPR014043,InterPro:IPR016035,InterPro:IPR016036,InterPro:IPR016038,InterPro:IPR016039,InterPro:IPR016040,InterPro:IPR018201,InterPro:IPR020801,InterPro:IPR020842,InterPro:IPR029058,InterPro:IPR029063,UniProtKB/TrEMBL:A1JTF9,NCBI_GP:CAL12655.1;Name=CAL12655.1;gbkey=CDS;gene=irp1;product=yersiniabactin biosynthetic protein;protein_id=CAL12655.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2826529	2827281	.	+	.	ID=id4604;Note=Pfam match to entry PF00109 ketoacyl-synt%2CBeta-ketoacyl synthase%2C N-terminal domain%2C score 294.3%2CE-value 9.7e-86;gbkey=misc_feature;gene=irp1;inference=protein motif:PFAM:PF00109
AM286415.1	EMBL	sequence_feature	2827018	2827068	.	+	.	ID=id4605;Note=PS00606 Beta-ketoacyl synthases active site.;gbkey=misc_feature;gene=irp1;inference=protein motif:Prosite:PS00606
AM286415.1	EMBL	sequence_feature	2827228	2827284	.	+	.	ID=id4606;Note=PS00095 C-5 cytosine-specific DNA methylases C-terminal signature.;gbkey=misc_feature;gene=irp1;inference=protein motif:Prosite:PS00095
AM286415.1	EMBL	sequence_feature	2827303	2827806	.	+	.	ID=id4607;Note=Pfam match to entry PF02801 ketoacyl-synt_C%2CBeta-ketoacyl synthase%2C C-terminal domain%2C score 276.6%2CE-value 2.1e-80;gbkey=misc_feature;gene=irp1;inference=protein motif:PFAM:PF02801
AM286415.1	EMBL	sequence_feature	2828101	2829045	.	+	.	ID=id4608;Note=Pfam match to entry PF00698 Acyl_transf%2C Acyl transferase domain%2C score 201.0%2C E-value 1.2e-57;gbkey=misc_feature;gene=irp1;inference=protein motif:PFAM:PF00698
AM286415.1	EMBL	sequence_feature	2831911	2832114	.	+	.	ID=id4609;Note=Pfam match to entry PF00550 pp-binding%2CPhosphopantetheine attachment site%2C score 27.8%2C E-value 1.7e-05;gbkey=misc_feature;gene=irp1;inference=protein motif:PFAM:PF00550
AM286415.1	EMBL	sequence_feature	2831989	2832036	.	+	.	ID=id4610;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=irp1;inference=protein motif:Prosite:PS00012
AM286415.1	EMBL	sequence_feature	2832181	2833077	.	+	.	ID=id4611;Note=Pfam match to entry PF00668 Condensation%2CCondensation domain%2C score 107.4%2C E-value 1.8e-29;gbkey=misc_feature;gene=irp1;inference=protein motif:PFAM:PF00668
AM286415.1	EMBL	sequence_feature	2832235	2832267	.	+	.	ID=id4612;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=irp1;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2834938	2835129	.	+	.	ID=id4613;Note=Pfam match to entry PF00550 pp-binding%2CPhosphopantetheine attachment site%2C score 48.8%2C E-value 7.9e-12;gbkey=misc_feature;gene=irp1;inference=protein motif:PFAM:PF00550
AM286415.1	EMBL	sequence_feature	2835004	2835051	.	+	.	ID=id4614;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=irp1;inference=protein motif:Prosite:PS00012
AM286415.1	EMBL	sequence_feature	2835187	2835903	.	+	.	ID=id4615;Note=Pfam match to entry PF00975 Thioesterase%2CThioesterase domain%2C score 52.1%2C E-value 8.1e-13;gbkey=misc_feature;gene=irp1;inference=protein motif:PFAM:PF00975
AM286415.1	EMBL	gene	2835936	2837036	.	+	.	ID=gene2561;Name=ybtU;gbkey=Gene;gene=ybtU;gene_biotype=protein_coding;gene_synonym=irp3;locus_tag=YE2619
AM286415.1	EMBL	CDS	2835936	2837036	.	+	0	ID=cds2488;Parent=gene2561;Dbxref=EnsemblGenomes-Gn:YE2619,EnsemblGenomes-Tr:CAL12656,GOA:A1JTG0,InterPro:IPR000683,InterPro:IPR010091,InterPro:IPR016040,PDB:4GMF,PDB:4GMG,UniProtKB/TrEMBL:A1JTG0,NCBI_GP:CAL12656.1;Name=CAL12656.1;gbkey=CDS;gene=ybtU;product=yersiniabactin biosynthetic protein YbtU;protein_id=CAL12656.1;transl_table=11
AM286415.1	EMBL	gene	2837033	2837836	.	+	.	ID=gene2562;Name=ybtT;gbkey=Gene;gene=ybtT;gene_biotype=protein_coding;gene_synonym=irp4;locus_tag=YE2620
AM286415.1	EMBL	CDS	2837033	2837836	.	+	0	ID=cds2489;Parent=gene2562;Dbxref=EnsemblGenomes-Gn:YE2620,EnsemblGenomes-Tr:CAL12657,GOA:A1JTG1,InterPro:IPR001031,InterPro:IPR012223,InterPro:IPR029058,UniProtKB/TrEMBL:A1JTG1,NCBI_GP:CAL12657.1;Name=CAL12657.1;gbkey=CDS;gene=ybtT;product=yersiniabactin biosynthetic protein YbtT;protein_id=CAL12657.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2837087	2837788	.	+	.	ID=id4616;Note=Pfam match to entry PF00975 Thioesterase%2CThioesterase domain%2C score 256.1%2C E-value 3.1e-74;gbkey=misc_feature;gene=ybtT;inference=protein motif:PFAM:PF00975
AM286415.1	EMBL	sequence_feature	2837294	2837323	.	+	.	ID=id4617;Note=PS00120 Lipases%2C serine active site.;gbkey=misc_feature;gene=ybtT;inference=protein motif:Prosite:PS00120
AM286415.1	EMBL	sequence_feature	2837366	2837398	.	+	.	ID=id4618;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ybtT;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2837840	2839417	.	+	.	ID=gene2563;Name=ybtE;gbkey=Gene;gene=ybtE;gene_biotype=protein_coding;gene_synonym=irp5;locus_tag=YE2621
AM286415.1	EMBL	CDS	2837840	2839417	.	+	0	ID=cds2490;Parent=gene2563;Dbxref=EnsemblGenomes-Gn:YE2621,EnsemblGenomes-Tr:CAL12658,GOA:A1JTG2,InterPro:IPR000873,InterPro:IPR020845,InterPro:IPR025110,UniProtKB/TrEMBL:A1JTG2,NCBI_GP:CAL12658.1;Name=CAL12658.1;gbkey=CDS;gene=ybtE;product=yersiniabactin siderophore biosynthetic protein;protein_id=CAL12658.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2837960	2839180	.	+	.	ID=id4619;Note=Pfam match to entry PF00501 AMP-binding%2CAMP-binding enzyme%2C score 357.6%2C E-value 8.7e-105;gbkey=misc_feature;gene=ybtE;inference=protein motif:PFAM:PF00501
AM286415.1	EMBL	sequence_feature	2838359	2838394	.	+	.	ID=id4620;Note=PS00455 Putative AMP-binding domain signature.;gbkey=misc_feature;gene=ybtE;inference=protein motif:Prosite:PS00455
AM286415.1	EMBL	sequence_feature	2838425	2838490	.	+	.	ID=id4621;Note=Predicted helix-turn-helix motif with score 1075.000%2C SD 2.85 at aa 196-217%2C sequence YNFSASAELCGISQQSVYLAVL;gbkey=misc_feature;gene=ybtE
AM286415.1	EMBL	sequence_feature	2838515	2838547	.	+	.	ID=id4622;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ybtE;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2839022	2839063	.	+	.	ID=id4623;Note=PS00761 Signal peptidases I signature 3.;gbkey=misc_feature;gene=ybtE;inference=protein motif:Prosite:PS00761
AM286415.1	EMBL	gene	2839548	2841569	.	+	.	ID=gene2564;Name=fyuA;gbkey=Gene;gene=fyuA;gene_biotype=protein_coding;gene_synonym=psn;locus_tag=YE2622
AM286415.1	EMBL	CDS	2839548	2841569	.	+	0	ID=cds2491;Parent=gene2564;Dbxref=EnsemblGenomes-Gn:YE2622,EnsemblGenomes-Tr:CAL12659,GOA:A1JTG3,InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR012910,NCBI_GP:CAL12659.1;Name=CAL12659.1;gbkey=CDS;gene=fyuA;product=pesticin/yersiniabactin receptor protein;protein_id=CAL12659.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2841237	2841563	.	+	.	ID=id4624;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 74.4%2C E-value 1.6e-19;gbkey=misc_feature;gene=fyuA;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	repeat_region	2842101	2843448	.	-	.	ID=id4625;Note=insertion element IS1328;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	2842101	2842120	.	-	.	ID=id4626;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	pseudogene	2842970	2843380	.	-	.	ID=gene2565;Name=YE2624;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2624;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	2842378	2842965	.	-	.	ID=gene2565;Name=YE2624;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2624;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	2842970	2843380	.	-	0	ID=cds2492;Parent=gene2565;Dbxref=PSEUDO:CAL12660.1;Note=Previously sequenced as Yersinia enterocolitica IS1328 transposase SWALL:Q9RIG6 (EMBL:AJ132945) (334 aa) fasta scores: E(): 3.2e-130%2C 98.2 38d in 334 aa. Also similar to Shigella flexneri 2a IS1328 transposase SWALL:Q93EZ2 (EMBL:AF326777) (334 aa) fasta scores: E(): 1.4e-97%2C 74.08 38d in 328 aa. Note this CDS carries a frame shift mutation following codon 137.;gbkey=CDS;inference=similar to sequence:INSDC:AJ132945;product=transposase for insertion sequence element IS1328 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2842378	2842965	.	-	0	ID=cds2492;Parent=gene2565;Dbxref=PSEUDO:CAL12660.1;Note=Previously sequenced as Yersinia enterocolitica IS1328 transposase SWALL:Q9RIG6 (EMBL:AJ132945) (334 aa) fasta scores: E(): 3.2e-130%2C 98.2 38d in 334 aa. Also similar to Shigella flexneri 2a IS1328 transposase SWALL:Q93EZ2 (EMBL:AF326777) (334 aa) fasta scores: E(): 1.4e-97%2C 74.08 38d in 328 aa. Note this CDS carries a frame shift mutation following codon 137.;gbkey=CDS;inference=similar to sequence:INSDC:AJ132945;product=transposase for insertion sequence element IS1328 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2842492	2842830	.	-	.	ID=id4627;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 169.7%2CE-value 3.2e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	INVERTED	2843429	2843448	.	-	.	ID=id4628;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	repeat_region	2843930	2845172	.	-	.	ID=id4629;Note=Insertion sequence element IS1329;gbkey=repeat_region
AM286415.1	EMBL	gene	2843960	2844709	.	-	.	ID=gene2566;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=YE2625
AM286415.1	EMBL	CDS	2843960	2844709	.	-	0	ID=cds2493;Parent=gene2566;Dbxref=EnsemblGenomes-Gn:YE2625,EnsemblGenomes-Tr:CAL12661,GOA:A1JLR3,InterPro:IPR001584,InterPro:IPR012337,InterPro:IPR025948,UniProtKB/TrEMBL:A1JLR3,NCBI_GP:CAL12661.1;Name=CAL12661.1;Note=Previously sequenced as Yersinia enterocolitica transposase B TnpB SWALL:Q9RIG3 (EMBL:AJ251581) (249 aa) fasta scores: E(): 1.4e-104%2C 100 38d in 249 aa. Also similar to Xanthomonas axonopodis pv. citri str. 306 ISxac3 transposase Xac0578 SWALL:AAM35467 (EMBL:AE011685) (272 aa) fasta scores: E(): 3.4e-37%2C 44.13 38d in 247 aa;gbkey=CDS;gene=tnpB;inference=similar to sequence:INSDC:AJ251581;product=transposase B;protein_id=CAL12661.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2843981	2844463	.	-	.	ID=id4630;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 133.0%2C E-value 3.5e-37;gbkey=misc_feature;gene=tnpB;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	2844799	2845131	.	-	.	ID=gene2567;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YE2626
AM286415.1	EMBL	CDS	2844799	2845131	.	-	0	ID=cds2494;Parent=gene2567;Dbxref=EnsemblGenomes-Gn:YE2626,EnsemblGenomes-Tr:CAL12662,GOA:A1JK04,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JK04,NCBI_GP:CAL12662.1;Name=CAL12662.1;Note=Previously sequenced as Yersinia enterocolitica IS1329 transposase A Trp1329A SWALL:Q9X9I2 (EMBL:AJ132945) (110 aa) fasta scores: E(): 1.8e-38%2C 100 38d in 110 aa. Also similar to Shigella dysenteriae transposase InsN for insertion sequence element IS911 SWALL:INSN_SHIDY (SWALL:P39213) (112 aa) fasta scores: E(): 7.6e-13%2C 42.45 id in 106 aa;gbkey=CDS;gene=tnpA;inference=similar to sequence:UniProtKB:P39213;product=IS1329 transposase A;protein_id=CAL12662.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2844832	2845098	.	-	.	ID=id4631;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 56.0%2C E-value 5.5e-14;gbkey=misc_feature;gene=tnpA;inference=protein motif:PFAM:PF01527
AM286415.1	EMBL	sequence_feature	2844976	2845041	.	-	.	ID=id4632;Note=Predicted helix-turn-helix motif with score 1580.000%2C SD 4.57 at aa 23-44%2C sequence YPVTQAAETMNIGLSTLQRWLR;gbkey=misc_feature;gene=tnpA
AM286415.1	EMBL	gene	2845485	2846861	.	+	.	ID=gene2568;Name=YE2628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2628
AM286415.1	EMBL	CDS	2845485	2846861	.	+	0	ID=cds2495;Parent=gene2568;Dbxref=EnsemblGenomes-Gn:YE2628,EnsemblGenomes-Tr:CAL12663,InterPro:IPR005502,UniProtKB/TrEMBL:A1JTG7,NCBI_GP:CAL12663.1;Name=CAL12663.1;Note=Previously sequenced as Yersinia enterocolitica high pathogenicity island hypothetical protein SWALL:Q9X9I0 (EMBL:AJ132945) (458 aa) fasta scores: E(): 4.8e-188%2C 100 38d in 458 aa. Also weakly similar to Listeria monocytogenes hypothetical protein Lmo0067 SWALL:Q8YAQ0 (EMBL:AL591973) (329 aa) fasta scores: E(): 0.011%2C 25.86 38d in 375 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL591973;product=hypothetical protein;protein_id=CAL12663.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2845509	2846681	.	+	.	ID=id4633;Note=Pfam match to entry PF03747 ADP-ribosyl_GH%2CADP-ribosylglycohydrolase%2C score 320.4%2C E-value 1.3e-93;gbkey=misc_feature;inference=protein motif:PFAM:PF03747
AM286415.1	EMBL	repeat_region	2846903	2848109	.	-	.	ID=id4634;Note=Insertion sequence element IS1400;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	2846903	2846914	.	-	.	ID=id4635;Note=putative inverted repeats for IS1400;gbkey=repeat_region
AM286415.1	EMBL	gene	2846919	2847713	.	-	.	ID=gene2569;Name=trp1400B;gbkey=Gene;gene=trp1400B;gene_biotype=protein_coding;locus_tag=YE2629
AM286415.1	EMBL	CDS	2846919	2847713	.	-	0	ID=cds2496;Parent=gene2569;Dbxref=EnsemblGenomes-Gn:YE2629,EnsemblGenomes-Tr:CAL12664,GOA:A1JTG8,InterPro:IPR001584,InterPro:IPR012337,InterPro:IPR025948,UniProtKB/TrEMBL:A1JTG8,NCBI_GP:CAL12664.1;Name=CAL12664.1;Note=Previously sequenced as Yersinia enterocolitica IS1400 transposase B Trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 3.3e-107%2C 99.24 38d in 264 aa Also similar to many others e.g. Yersinia pestis putative transposase Ypcd1.94 SWALL:Q9RI05 (EMBL:AL117189) (269 aa) fasta scores: E(): 5.7e-38%2C 44.04 38d in 252 aa. Note the differing predicted start codons for this CDS compared with that previously published.;gbkey=CDS;gene=trp1400B;inference=similar to sequence:INSDC:AL117189;product=IS1400 transposase B;protein_id=CAL12664.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2846961	2847437	.	-	.	ID=id4636;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 133.9%2C E-value 1.9e-37;gbkey=misc_feature;gene=trp1400B;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	2847764	2848051	.	-	.	ID=gene2570;Name=trp1400A;gbkey=Gene;gene=trp1400A;gene_biotype=protein_coding;locus_tag=YE2630
AM286415.1	EMBL	CDS	2847764	2848051	.	-	0	ID=cds2497;Parent=gene2570;Dbxref=EnsemblGenomes-Gn:YE2630,EnsemblGenomes-Tr:CAL12665,GOA:A1JTG9,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JTG9,NCBI_GP:CAL12665.1;Name=CAL12665.1;Note=Previously sequenced as Yersinia enterocolitica IS1400 transposase A Trp1400A SWALL:Q9X9H8 (EMBL:AJ132945) (96 aa) fasta scores: E(): 3e-31%2C 96.84 38d in 95 aa. Also similar to many others e.g. Yersinia pestis putative transposase Y0084 or Ypcd1.93 SWALL:O68709 (EMBL:AF053946) (88 aa) fasta scores: E(): 5.5e-15%2C 52.27 38d in 88 aa;gbkey=CDS;gene=trp1400A;inference=similar to sequence:INSDC:AJ132945;product=IS1400 transposase A;protein_id=CAL12665.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2847767	2848021	.	-	.	ID=id4637;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 122.7%2C E-value 4.6e-34;gbkey=misc_feature;gene=trp1400A;inference=protein motif:PFAM:PF01527
AM286415.1	EMBL	sequence_feature	2847902	2847967	.	-	.	ID=id4638;Note=Predicted helix-turn-helix motif with score 1103.000%2C SD 2.94 at aa 29-50%2C sequence RTVKDVCREAAISEASYYNWKA;gbkey=misc_feature;gene=trp1400A
AM286415.1	EMBL	repeat_region	2848098	2848109	.	+	.	ID=id4639;Note=putative inverted repeats for IS1400;gbkey=repeat_region
AM286415.1	EMBL	gene	2848733	2850496	.	-	.	ID=gene2571;Name=YE2632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2632
AM286415.1	EMBL	CDS	2848733	2850496	.	-	0	ID=cds2498;Parent=gene2571;Dbxref=EnsemblGenomes-Gn:YE2632,EnsemblGenomes-Tr:CAL12666,InterPro:IPR001650,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTH0,NCBI_GP:CAL12666.1;Name=CAL12666.1;Note=N-terminal region has previously been sequenced as Yersinia enterocolitica hypothetical 44.5 kDa protein SWALL:Q9X9H5 (EMBL:AJ132945) (384 aa) fasta scores: E(): 2.4e-151%2C 99.47 38d in 384 aa. C-terminal region has previously been sequenced as Yersinia enterocolitica hypothetical 22.9 kDa protein SWALL:Q9X9H6 (EMBL:AJ132945) (196 aa) fasta scores: E(): 2.2e-70%2C 98.98 38d in 196 aa. Similar to the C-terminal region of Escherichia coli hypothetical protein YfjK SWALL:YFJK_ECOLI (SWALL:P52126) (729 aa) fasta scores: E(): 5.8e-29%2C 31.08 38d in 579 aa. Possible pseudogene;gbkey=CDS;inference=similar to sequence:UniProtKB:P52126;product=hypothetical protein;protein_id=CAL12666.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2849648	2849878	.	-	.	ID=id4640;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 19.7%2C E-value 0.00031;gbkey=misc_feature;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	gene	2850641	2850952	.	-	.	ID=gene2572;Name=YE2633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2633
AM286415.1	EMBL	CDS	2850641	2850952	.	-	0	ID=cds2499;Parent=gene2572;Dbxref=EnsemblGenomes-Gn:YE2633,EnsemblGenomes-Tr:CAL12667,UniProtKB/TrEMBL:A1JTH1,NCBI_GP:CAL12667.1;Name=CAL12667.1;Note=Previously sequenced as Yersinia enterocolitica hypothetical 12.0 kDa protein SWALL:Q9X9H4 (EMBL:AJ132945) (103 aa) fasta scores: E(): 1.2e-39%2C 100 38d in 103 aa. Similar to the N-terminus of Escherichia coli hypothetical protein YfjK SWALL:YFJK_ECOLI (SWALL:P52126) (729 aa) fasta scores: E(): 0.025%2C 27.55 38d in 98 aa. Possible pseudogene;gbkey=CDS;inference=similar to sequence:UniProtKB:P52126;product=hypothetical protein;protein_id=CAL12667.1;transl_table=11
AM286415.1	EMBL	gene	2850949	2852388	.	-	.	ID=gene2573;Name=YE2634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2634
AM286415.1	EMBL	CDS	2850949	2852388	.	-	0	ID=cds2500;Parent=gene2573;Dbxref=EnsemblGenomes-Gn:YE2634,EnsemblGenomes-Tr:CAL12668,GOA:A1JTH2,InterPro:IPR009003,InterPro:IPR014976,UniProtKB/TrEMBL:A1JTH2,NCBI_GP:CAL12668.1;Name=CAL12668.1;Note=N-terminus has previously sequenced as Yersinia enterocolitica hypothetical 43.1 kDa protein SWALL:Q9X9H3 (EMBL:AJ132945) (383 aa) fasta scores: E(): 1.9e-149%2C99.47 38d in 380 aa. C-terminus is similar to the C-terminal region of Corynebacterium glutamicum acetate kinase AckA or Ack SWALL:ACKA_CORGL (SWALL:P77845) (397 aa) fasta scores: E(): 1.7%2C 20.18 38d in 317 aa. Possible alternative translational start site;gbkey=CDS;inference=similar to sequence:UniProtKB:P77845;product=hypothetical protein;protein_id=CAL12668.1;transl_table=11
AM286415.1	EMBL	gene	2852375	2853514	.	-	.	ID=gene2574;Name=YE2635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2635
AM286415.1	EMBL	CDS	2852375	2853514	.	-	0	ID=cds2501;Parent=gene2574;Dbxref=EnsemblGenomes-Gn:YE2635,EnsemblGenomes-Tr:CAL12669,InterPro:IPR001279,UniProtKB/TrEMBL:A1JTH3,NCBI_GP:CAL12669.1;Name=CAL12669.1;Note=Previously sequenced as Yersinia enterocolitica hypothetical 43.2 kDa protein SWALL:Q9X9H2 (EMBL:AJ132945) (379 aa) fasta scores: E(): 1.5e-141%2C 100 38d in 379 aa. C-terminus is similar to the C-terminal region of Staphylococcus aureus hypothetical protein SAV1588 or SA1416 SWALL:Q99TR1 (EMBL:AP003362) (733 aa) fasta scores: E(): 0.0073%2C 26.13 38d in 264 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003362;product=putative metallo-beta-lactamase superfamily protein;protein_id=CAL12669.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2853329	2853499	.	-	.	ID=id4641;Note=Pfam match to entry PF00753 lactamase_B%2CMetallo-beta-lactamase superfamily%2C score 20.4%2C E-value 4.1e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00753
AM286415.1	EMBL	repeat_region	2854111	2854127	.	+	.	ID=id4642;Note=Direct repeat flanking High Pathogenicity island YP-HPI%2C partial tRNA Asn%2C 17mer;gbkey=repeat_region
AM286415.1	EMBL	gene	2854263	2854961	.	+	.	ID=gene2575;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=YE2636
AM286415.1	EMBL	CDS	2854263	2854961	.	+	0	ID=cds2502;Parent=gene2575;Dbxref=EnsemblGenomes-Gn:YE2636,EnsemblGenomes-Tr:CAL12670,GOA:A1JTH4,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR020103,UniProtKB/TrEMBL:A1JTH4,NCBI_GP:CAL12670.1;Name=CAL12670.1;Note=Similar to Escherichia coli ribosomal large subunit pseudouridine synthase A RluA SWALL:RLUA_ECOLI (SWALL:P39219) (218 aa) fasta scores: E(): 1.7e-21%2C 42 38d in 200 aa. N-terminus has previously been sequenced as Yersinia enterocolitica hypothetical 13.7 kDa protein SWALL:Q9X9H1 (EMBL:AJ132945) (125 aa) fasta scores: E(): 2e-48%2C 99.2 38d in 125 aa;gbkey=CDS;gene=rluA;inference=similar to sequence:UniProtKB:P39219;product=putative ribosomal large subunit pseudouridine synthase;protein_id=CAL12670.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2854335	2854805	.	+	.	ID=id4643;Note=Pfam match to entry PF00849 PseudoU_synth_2%2C RNA pseudouridylate synthase%2C score 148.2%2C E-value 9.6e-42;gbkey=misc_feature;gene=rluA;inference=protein motif:PFAM:PF00849
AM286415.1	EMBL	sequence_feature	2854449	2854493	.	+	.	ID=id4644;Note=PS01129 Rlu family of pseudouridine synthase signature.;gbkey=misc_feature;gene=rluA;inference=protein motif:Prosite:PS01129
AM286415.1	EMBL	gene	2854972	2855511	.	-	.	ID=gene2576;Name=YE2637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2637
AM286415.1	EMBL	CDS	2854972	2855511	.	-	0	ID=cds2503;Parent=gene2576;Dbxref=EnsemblGenomes-Gn:YE2637,EnsemblGenomes-Tr:CAL12671,InterPro:IPR018636,UniProtKB/TrEMBL:A1JTH5,NCBI_GP:CAL12671.1;Name=CAL12671.1;Note=Similar to many proteins of undefined function including: Yersinia pestis nucleoprotein/polynucleotide-associated enzyme y2589 SWALL:Q8D084 (EMBL:AE013861) (179 aa) fasta scores: E(): 8.5e-50%2C 92.73 38d in 179 aa and Escherichia coli hypothetical protein YaiL or b0354 SWALL:YAIL_ECOLI (SWALL:P51024) (179 aa) fasta scores: E(): 2e-46%2C 86.59 id in 179 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P51024;product=conserved hypothetical protein;protein_id=CAL12671.1;transl_table=11
AM286415.1	EMBL	gene	2855655	2856086	.	-	.	ID=gene2577;Name=YE2638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2638
AM286415.1	EMBL	CDS	2855655	2856086	.	-	0	ID=cds2504;Parent=gene2577;Dbxref=EnsemblGenomes-Gn:YE2638,EnsemblGenomes-Tr:CAL12672,GOA:A1JTH6,InterPro:IPR002178,InterPro:IPR016152,UniProtKB/TrEMBL:A1JTH6,NCBI_GP:CAL12672.1;Name=CAL12672.1;Note=Similar to Bacillus stearothermophilus PTS system%2Cmannitol-specific IIa component MtlF SWALL:PTMA_BACST (SWALL:Q45420) (145 aa) fasta scores: E(): 3.4e-11%2C 33.08 id in 136 aa%2C and to Staphylococcus carnosus PTS system%2Cmannitol-specific IIa component MtlF SWALL:PTMA_STACA (SWALL:P17876) (143 aa) fasta scores: E(): 5.4e-11%2C 32.03 id in 128 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q45420;product=Phosphoenolpyruvate-dependent sugar phosphotransferase system%2C IIa component;protein_id=CAL12672.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2855658	2856080	.	-	.	ID=id4645;Note=Pfam match to entry PF00359 PTS_EIIA_2%2CPhosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2%2C score 84.7%2C E-value 1.3e-22;gbkey=misc_feature;inference=protein motif:PFAM:PF00359
AM286415.1	EMBL	gene	2856139	2857536	.	-	.	ID=gene2578;Name=YE2639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2639
AM286415.1	EMBL	CDS	2856139	2857536	.	-	0	ID=cds2505;Parent=gene2578;Dbxref=EnsemblGenomes-Gn:YE2639,EnsemblGenomes-Tr:CAL12673,GOA:A1JTH7,InterPro:IPR003663,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JTH7,NCBI_GP:CAL12673.1;Name=CAL12673.1;gbkey=CDS;product=putative transporter protein;protein_id=CAL12673.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2856154	2857485	.	-	.	ID=id4646;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 387.1%2C E-value 1.2e-113;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	2857420	2857479	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	2857324	2857392	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	2857219	2857287	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	2857027	2857095	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	2856955	2857008	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	2856721	2856789	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	2856571	2856639	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	2856475	2856543	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	2856388	2856456	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	2856292	2856360	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	2856205	2856273	.	-	.	ID=id4647;Note=11 probable transmembrane helices predicted for YE2639 by TMHMM2.0 at aa 20-39%2C 49-71%2C 84-106%2C 148-170%2C177-194%2C 250-272%2C 300-322%2C 332-354%2C 361-383%2C 393-415 and 422-444;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	2857270	2857323	.	-	.	ID=id4648;Note=PS00216 Sugar transport proteins signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00216
AM286415.1	EMBL	pseudogene	2858596	2859159	.	-	.	ID=gene2579;Name=YE2640;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2640;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	2858260	2858595	.	-	.	ID=gene2579;Name=YE2640;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE2640;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	2858596	2859159	.	-	0	ID=cds2506;Parent=gene2579;Note=Similar to Ralstonia solanacearum putative aspartyl/asparaginyl beta-hydroxylase transmembrane protein RSC1877 or RS03437 SWALL:Q8XY86 (EMBL:AL646067) (300 aa) fasta scores: E(): 1.2e-82%2C 61.4 38d in 298 aa. N-terminus is similar to the C-terminal region of Homo sapiens aspartyl/asparaginyl beta-hydroxylase AspH SWALL:ASPH_HUMAN (SWALL:Q12797) (757 aa) fasta scores: E(): 3.1e-06%2C 28.38 38d in 229 aa. Contains a nonsense mutation (opal) after codon 188;gbkey=CDS;inference=similar to sequence:UniProtKB:Q12797;product=putative membrane protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2858260	2858595	.	-	0	ID=cds2506;Parent=gene2579;Note=Similar to Ralstonia solanacearum putative aspartyl/asparaginyl beta-hydroxylase transmembrane protein RSC1877 or RS03437 SWALL:Q8XY86 (EMBL:AL646067) (300 aa) fasta scores: E(): 1.2e-82%2C 61.4 38d in 298 aa. N-terminus is similar to the C-terminal region of Homo sapiens aspartyl/asparaginyl beta-hydroxylase AspH SWALL:ASPH_HUMAN (SWALL:Q12797) (757 aa) fasta scores: E(): 3.1e-06%2C 28.38 38d in 229 aa. Contains a nonsense mutation (opal) after codon 188;gbkey=CDS;inference=similar to sequence:UniProtKB:Q12797;product=putative membrane protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2858263	2858322	.	-	.	ID=id4649;Note=1 probable transmembrane helix predicted for YE2640 by TMHMM2.0 at aa 58-77;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	2859106	2859150	.	-	.	ID=id4650;Note=1 probable transmembrane helix predicted for YE2641 by TMHMM2.0 at aa 4-18;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2859267	2860016	.	-	.	ID=gene2580;Name=YE2642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2642
AM286415.1	EMBL	CDS	2859267	2860016	.	-	0	ID=cds2507;Parent=gene2580;Dbxref=EnsemblGenomes-Gn:YE2642,EnsemblGenomes-Tr:CAL12675,GOA:A1JTH8,InterPro:IPR003542,InterPro:IPR008278,UniProtKB/TrEMBL:A1JTH8,NCBI_GP:CAL12675.1;Name=CAL12675.1;gbkey=CDS;product=putative phosphopantetheinyl transferase;protein_id=CAL12675.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2859321	2859617	.	-	.	ID=id4651;Note=Pfam match to entry PF01648 ACPS%2C4'-phosphopantetheinyl transferase superfamily%2C score 5.0%2C E-value 0.0016;gbkey=misc_feature;inference=protein motif:PFAM:PF01648
AM286415.1	EMBL	gene	2860025	2860225	.	-	.	ID=gene2581;Name=YE2643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2643
AM286415.1	EMBL	CDS	2860025	2860225	.	-	0	ID=cds2508;Parent=gene2581;Dbxref=EnsemblGenomes-Gn:YE2643,EnsemblGenomes-Tr:CAL12676,UniProtKB/TrEMBL:A1JTH9,NCBI_GP:CAL12676.1;Name=CAL12676.1;Note=Poor database matches. Similar to Yersinia pestis putative exported protein YPO2560 SWALL:Q8ZDK2 (EMBL:AJ414152) (89 aa) fasta scores: E(): 5.8%2C 50 38d in 34 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414152;product=putative exported protein;protein_id=CAL12676.1;transl_table=11
AM286415.1	EMBL	gene	2860721	2861560	.	+	.	ID=gene2582;Name=YE2644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2644
AM286415.1	EMBL	CDS	2860721	2861560	.	+	0	ID=cds2509;Parent=gene2582;Dbxref=EnsemblGenomes-Gn:YE2644,EnsemblGenomes-Tr:CAL12677,GOA:A1JTI0,InterPro:IPR004682,InterPro:IPR018389,UniProtKB/TrEMBL:A1JTI0,NCBI_GP:CAL12677.1;Name=CAL12677.1;gbkey=CDS;product=putative C4-dicarboxylate transporter%2Cperiplasmic protein;protein_id=CAL12677.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2860721	2861524	.	+	.	ID=id4652;Note=Pfam match to entry PF03480 SBP_bac_7%2C Bacterial extracellular solute-binding protein%2C family 7%2C score 240.3%2C E-value 1.8e-69;gbkey=misc_feature;inference=protein motif:PFAM:PF03480
AM286415.1	EMBL	gene	2861684	2862190	.	+	.	ID=gene2583;Name=YE2645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2645
AM286415.1	EMBL	CDS	2861684	2862190	.	+	0	ID=cds2510;Parent=gene2583;Dbxref=EnsemblGenomes-Gn:YE2645,EnsemblGenomes-Tr:CAL12678,InterPro:IPR007387,UniProtKB/TrEMBL:A1JTI1,NCBI_GP:CAL12678.1;Name=CAL12678.1;gbkey=CDS;product=putative C4-dicarboxylate transporter%2C small subunit;protein_id=CAL12678.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2861720	2861788	.	+	.	ID=id4653;Note=4 probable transmembrane helices predicted for YE2645 by TMHMM2.0 at aa 13-35%2C 50-69%2C 90-112 and 127-149;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2861831	2861890	.	+	.	ID=id4653;Note=4 probable transmembrane helices predicted for YE2645 by TMHMM2.0 at aa 13-35%2C 50-69%2C 90-112 and 127-149;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2861951	2862019	.	+	.	ID=id4653;Note=4 probable transmembrane helices predicted for YE2645 by TMHMM2.0 at aa 13-35%2C 50-69%2C 90-112 and 127-149;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2862062	2862130	.	+	.	ID=id4653;Note=4 probable transmembrane helices predicted for YE2645 by TMHMM2.0 at aa 13-35%2C 50-69%2C 90-112 and 127-149;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	2862209	2863501	.	+	.	ID=gene2584;Name=YE2646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2646
AM286415.1	EMBL	CDS	2862209	2863501	.	+	0	ID=cds2511;Parent=gene2584;Dbxref=EnsemblGenomes-Gn:YE2646,EnsemblGenomes-Tr:CAL12679,GOA:A1JTI2,InterPro:IPR004681,InterPro:IPR010656,UniProtKB/TrEMBL:A1JTI2,NCBI_GP:CAL12679.1;Name=CAL12679.1;gbkey=CDS;product=putative C4-dicarboxylate transporter%2C large subunit;protein_id=CAL12679.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2862245	2862313	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	2862371	2862430	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	2862449	2862517	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	2862704	2862772	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	2862833	2862901	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	2862911	2862979	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	2863037	2863105	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	2863148	2863201	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	2863214	2863267	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	2863295	2863363	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	2863400	2863468	.	+	.	ID=id4654;Note=11 probable transmembrane helices predicted for YE2646 by TMHMM2.0 at aa 13-35%2C 55-74%2C 81-103%2C 166-188%2C209-231%2C 235-257%2C 277-299%2C 314-331%2C 336-353%2C 363-385 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	2862599	2863081	.	+	.	ID=id4655;Note=Pfam match to entry PF00597 DedA%2C DedA family %2Cscore 18.6%2C E-value 0.00013;gbkey=misc_feature;inference=protein motif:PFAM:PF00597
AM286415.1	EMBL	gene	2863701	2865164	.	-	.	ID=gene2585;Name=citT;gbkey=Gene;gene=citT;gene_biotype=protein_coding;locus_tag=YE2647
AM286415.1	EMBL	CDS	2863701	2865164	.	-	0	ID=cds2512;Parent=gene2585;Dbxref=EnsemblGenomes-Gn:YE2647,EnsemblGenomes-Tr:CAL12680,GOA:A1JTI3,InterPro:IPR001898,UniProtKB/TrEMBL:A1JTI3,NCBI_GP:CAL12680.1;Name=CAL12680.1;Note=Similar to Escherichia coli citrate carrier CitT SWALL:CITT_ECOLI (SWALL:P77405) (487 aa) fasta scores: E(): 1.4e-159%2C 81.68 38d in 486 aa%2C and to Salmonella typhi citrate carrier STY0667 SWALL:Q8Z8J3 (EMBL:AL627267) (501 aa) fasta scores: E(): 2.3e-123%2C 79.8 38d in 500 aa;gbkey=CDS;gene=citT;inference=similar to sequence:UniProtKB:P77405;product=citrate carrier;protein_id=CAL12680.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2863707	2865158	.	-	.	ID=id4656;Note=Pfam match to entry PF00939 Na_sulph_symp%2CSodium:sulfate symporter transmembrane region%2C score 849.1%2C E-value 9.8e-253;gbkey=misc_feature;gene=citT;inference=protein motif:PFAM:PF00939
AM286415.1	EMBL	sequence_feature	2865093	2865146	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	2865006	2865065	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	2864925	2864993	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	2864814	2864882	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	2864694	2864753	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	2864520	2864588	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	2864391	2864459	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	2864250	2864303	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	2864178	2864231	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	2864082	2864150	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	2863977	2864045	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	2863818	2863886	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	2863716	2863784	.	-	.	ID=id4657;Note=13 probable transmembrane helices predicted for YE2647 by TMHMM2.0 at aa 7-24%2C 34-53%2C 58-80%2C 95-117%2C138-157%2C 193-215%2C 236-258%2C 288-305%2C 312-329%2C 339-361%2C374-396%2C 427-449 and 461-483;gbkey=misc_feature;gene=citT;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	gene	2865158	2866126	.	-	.	ID=gene2586;Name=citG;gbkey=Gene;gene=citG;gene_biotype=protein_coding;locus_tag=YE2648
AM286415.1	EMBL	CDS	2865158	2866126	.	-	0	ID=cds2513;Parent=gene2586;Dbxref=EnsemblGenomes-Gn:YE2648,EnsemblGenomes-Tr:CAL12681,GOA:A1JTI4,InterPro:IPR002736,InterPro:IPR017551,UniProtKB/TrEMBL:A1JTI4,NCBI_GP:CAL12681.1;Name=CAL12681.1;Note=Similar to Escherichia coli 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase CitG SWALL:CITG_ECOLI (SWALL:P77231) (292 aa) fasta scores: E(): 5.2e-65%2C 58.27 38d in 290 aa%2C and to Salmonella typhi CitG protein STY0668 SWALL:Q8Z8J2 (EMBL:AL627267) (298 aa) fasta scores: E(): 1.5e-66%2C 64.2 id in 271 aa;gbkey=CDS;gene=citG;inference=similar to sequence:UniProtKB:P77231;product=2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase;protein_id=CAL12681.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2865266	2866057	.	-	.	ID=id4658;Note=Pfam match to entry PF01874 CitG%2C ATP:dephospho-CoA triphosphoribosyl transferase%2C score 366.2%2C E-value 2.2e-107;gbkey=misc_feature;gene=citG;inference=protein motif:PFAM:PF01874
AM286415.1	EMBL	gene	2866131	2866679	.	-	.	ID=gene2587;Name=citX;gbkey=Gene;gene=citX;gene_biotype=protein_coding;locus_tag=YE2649
AM286415.1	EMBL	CDS	2866131	2866679	.	-	0	ID=cds2514;Parent=gene2587;Dbxref=EnsemblGenomes-Gn:YE2649,EnsemblGenomes-Tr:CAL12682,GOA:A1JTI5,InterPro:IPR005551,UniProtKB/TrEMBL:A1JTI5,NCBI_GP:CAL12682.1;Name=CAL12682.1;Note=Similar to Escherichia coli apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CitX SWALL:CITX_ECOLI (SWALL:P77563) (183 aa) fasta scores: E(): 5e-33%2C 49.15 38d in 177 aa%2C and to Salmonella typhimurium putative cytoplasmic protein STM0620 SWALL:Q8ZR13 (EMBL:AE008724) (183 aa) fasta scores: E(): 8.1e-32%2C 47.97 38d in 173 aa;gbkey=CDS;gene=citX;inference=similar to sequence:UniProtKB:P77563;product=putative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase;protein_id=CAL12682.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2866134	2866646	.	-	.	ID=id4659;Note=Pfam match to entry PF03802 CitX%2C Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase%2C score 227.2%2CE-value 1.5e-65;gbkey=misc_feature;gene=citX;inference=protein motif:PFAM:PF03802
AM286415.1	EMBL	sequence_feature	2866227	2866244	.	-	.	ID=id4660;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=citX;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	2866683	2868200	.	-	.	ID=gene2588;Name=citF;gbkey=Gene;gene=citF;gene_biotype=protein_coding;locus_tag=YE2650
AM286415.1	EMBL	CDS	2866683	2868200	.	-	0	ID=cds2515;Parent=gene2588;Dbxref=EnsemblGenomes-Gn:YE2650,EnsemblGenomes-Tr:CAL12683,GOA:A1JTI6,InterPro:IPR006472,UniProtKB/TrEMBL:A1JTI6,NCBI_GP:CAL12683.1;Name=CAL12683.1;Note=Similar to Klebsiella pneumoniae citrate lyase alpha chain CitF SWALL:CILA_KLEPN (SWALL:P45413) (508 aa) fasta scores: E(): 3.7e-133%2C 70.78 38d in 486 aa%2C and to Salmonella typhimurium bifunctional citrate lyase alpha chain/citrate-ACP transferase STM0621 SWALL:Q8ZR12 (EMBL:AE008724) (509 aa) fasta scores: E(): 2.1e-158%2C79.76 38d in 504 aa;gbkey=CDS;gene=citF;inference=similar to sequence:UniProtKB:P45413;product=citrate lyase alpha chain;protein_id=CAL12683.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2867115	2867144	.	-	.	ID=id4661;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=citF;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	2868204	2869100	.	-	.	ID=gene2589;Name=citE;gbkey=Gene;gene=citE;gene_biotype=protein_coding;locus_tag=YE2651
AM286415.1	EMBL	CDS	2868204	2869100	.	-	0	ID=cds2516;Parent=gene2589;Dbxref=EnsemblGenomes-Gn:YE2651,EnsemblGenomes-Tr:CAL12684,GOA:A1JTI7,InterPro:IPR005000,InterPro:IPR011206,InterPro:IPR015813,UniProtKB/TrEMBL:A1JTI7,NCBI_GP:CAL12684.1;Name=CAL12684.1;gbkey=CDS;gene=citE;product=putative citrate lyase beta chain;protein_id=CAL12684.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2869008	2869064	.	-	.	ID=id4662;Note=1 probable transmembrane helix predicted for YE2651 by TMHMM2.0 at aa 13-31;gbkey=misc_feature;gene=citE;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2869097	2869390	.	-	.	ID=gene2590;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=YE2652
AM286415.1	EMBL	CDS	2869097	2869390	.	-	0	ID=cds2517;Parent=gene2590;Dbxref=EnsemblGenomes-Gn:YE2652,EnsemblGenomes-Tr:CAL12685,GOA:A1JTI8,InterPro:IPR006495,InterPro:IPR023439,NCBI_GP:CAL12685.1;Name=CAL12685.1;Note=Similar to Escherichia coli citrate lyase acyl carrier protein CitD SWALL:CILG_ECOLI (SWALL:P77618) (98 aa) fasta scores: E(): 5.1e-22%2C 67.02 38d in 94 aa%2C and to Salmonella typhimurium%2C and Salmonella typhi citrate lyase acyl carrier protein STM0623 or STY0672 SWALL:Q8XGN1 (EMBL:AE008724) (98 aa) fasta scores: E(): 8.3e-22%2C 67.02 id in 94 aa;gbkey=CDS;gene=citD;inference=similar to sequence:UniProtKB:P77618;product=citrate lyase acyl carrier protein;protein_id=CAL12685.1;transl_table=11
AM286415.1	EMBL	gene	2869491	2870567	.	-	.	ID=gene2591;Name=citC;gbkey=Gene;gene=citC;gene_biotype=protein_coding;locus_tag=YE2653
AM286415.1	EMBL	CDS	2869491	2870567	.	-	0	ID=cds2518;Parent=gene2591;Dbxref=EnsemblGenomes-Gn:YE2653,EnsemblGenomes-Tr:CAL12686,GOA:A1JTI9,InterPro:IPR000182,InterPro:IPR004821,InterPro:IPR005216,InterPro:IPR013166,InterPro:IPR014729,InterPro:IPR016181,UniProtKB/TrEMBL:A1JTI9,NCBI_GP:CAL12686.1;Name=CAL12686.1;Note=Similar to Escherichia coli [citrate [pro-3s]-lyase] ligase CitC SWALL:CITC_ECOLI (SWALL:P77390) (352 aa) fasta scores: E(): 9.5e-104%2C70.77 38d in 349 aa%2C and to Salmonella typhimurium citrate lyase synthetase STM0624 SWALL:Q8ZR10 (EMBL:AE008724) (358 aa) fasta scores: E(): 6.1e-104%2C 70.94 38d in 351 aa;gbkey=CDS;gene=citC;inference=similar to sequence:UniProtKB:P77390;product=[citrate [pro-3s]-lyase] ligase;protein_id=CAL12686.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2870241	2870456	.	-	.	ID=id4663;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 27.3%2C E-value 2.4e-05;gbkey=misc_feature;gene=citC;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	2870925	2872580	.	+	.	ID=gene2592;Name=citA;gbkey=Gene;gene=citA;gene_biotype=protein_coding;gene_synonym=dpiB,mpdB;locus_tag=YE2654
AM286415.1	EMBL	CDS	2870925	2872580	.	+	0	ID=cds2519;Parent=gene2592;Dbxref=EnsemblGenomes-Gn:YE2654,EnsemblGenomes-Tr:CAL12687,GOA:A1JTJ0,InterPro:IPR000014,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR016120,InterPro:IPR029150,InterPro:IPR029151,UniProtKB/TrEMBL:A1JTJ0,NCBI_GP:CAL12687.1;Name=CAL12687.1;Note=Two-component regulatory system family%2C sensor kinase protein. Similar to Escherichia coli sensor kinase DpiB or CitA or MpdB SWALL:DPIB_ECOLI (SWALL:P77510) (552 aa) fasta scores: E(): 9.6e-131%2C 62.31 38d in 528 aa%2C and to Salmonella typhi sensor kinase STY0674 SWALL:Q8Z8I7 (EMBL:AL627267) (553 aa) fasta scores: E(): 3.5e-131%2C62.47 38d in 533 aa;gbkey=CDS;gene=citA;inference=similar to sequence:UniProtKB:P77510;product=sensor kinase protein;protein_id=CAL12687.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2871009	2871068	.	+	.	ID=id4664;Note=2 probable transmembrane helices predicted for YE2654 by TMHMM2.0 at aa 36-55 and 195-217;gbkey=misc_feature;gene=citA;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2871486	2871554	.	+	.	ID=id4664;Note=2 probable transmembrane helices predicted for YE2654 by TMHMM2.0 at aa 36-55 and 195-217;gbkey=misc_feature;gene=citA;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2872242	2872574	.	+	.	ID=id4665;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 111.3%2C E-value 1.2e-30;gbkey=misc_feature;gene=citA;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	2872602	2873288	.	+	.	ID=gene2593;Name=citB;gbkey=Gene;gene=citB;gene_biotype=protein_coding;gene_synonym=criR,dpiA,mpdA;locus_tag=YE2655
AM286415.1	EMBL	CDS	2872602	2873288	.	+	0	ID=cds2520;Parent=gene2593;Dbxref=EnsemblGenomes-Gn:YE2655,EnsemblGenomes-Tr:CAL12688,GOA:A1JTJ1,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR024187,InterPro:IPR028141,UniProtKB/TrEMBL:A1JTJ1,NCBI_GP:CAL12688.1;Name=CAL12688.1;Note=Two-component regulatory system family%2C response regulator protein. Similar to Escherichia coli and Shigella flexneri transcriptional regulatory protein DpiA or CitB or MpdA or CriR SWALL:DPIA_ECOLI (SWALL:Q54149) (226 aa) fasta scores: E(): 1.4e-48%2C 59.72 38d in 221 aa%2Cand to Salmonella typhi transcriptional regulatory protein STY0675 SWALL:Q8Z8I6 (EMBL:AL627267) (226 aa) fasta scores: E(): 5e-49%2C 59.72 38d in 221 aa;gbkey=CDS;gene=citB;inference=similar to sequence:UniProtKB:Q54149;product=response regulator protein;protein_id=CAL12688.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2872611	2872976	.	+	.	ID=id4666;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 85.0%2C E-value 1e-22;gbkey=misc_feature;gene=citB;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	2873130	2873195	.	+	.	ID=id4667;Note=Predicted helix-turn-helix motif with score 1691.000%2C SD 4.95 at aa 177-198%2C sequence YTAENVAQMLGLSRTTARRYLE;gbkey=misc_feature;gene=citB
AM286415.1	EMBL	gene	2873490	2874119	.	+	.	ID=gene2594;Name=YE2656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2656
AM286415.1	EMBL	CDS	2873490	2874119	.	+	0	ID=cds2521;Parent=gene2594;Dbxref=EnsemblGenomes-Gn:YE2656,EnsemblGenomes-Tr:CAL12689,GOA:A1JTJ2,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JTJ2,NCBI_GP:CAL12689.1;Name=CAL12689.1;Note=Similar to Salmonella typhimurium transcriptional regulatory protein UhpA or Stm3790 SWALL:UHPA_SALTY (SWALL:P27667) (196 aa) fasta scores: E(): 5.7e-33%2C 52.52 id in 198 aa and to Escherichia coli O157:H7 putative response regulator%2C hexosephosphate transport z0463 or ecs0418 SWALL:Q8X5I8 (EMBL:AE005216) (209 aa) fasta scores: E(): 7.8e-57%2C 72.24 38d in 209 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P27667;product=GerR-family transcriptional regulatory protein;protein_id=CAL12689.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2873493	2873858	.	+	.	ID=id4668;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 120.4%2C E-value 2.2e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	2873916	2874113	.	+	.	ID=id4669;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 93.7%2C E-value 2.4e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	2873967	2874050	.	+	.	ID=id4670;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	sequence_feature	2873970	2874035	.	+	.	ID=id4671;Note=Predicted helix-turn-helix motif with score 1158.000%2C SD 3.13 at aa 161-182%2C sequence ISVKSIAEQLSLSHKTVHVHRA;gbkey=misc_feature
AM286415.1	EMBL	gene	2874121	2875698	.	+	.	ID=gene2595;Name=YE2657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2657
AM286415.1	EMBL	CDS	2874121	2875698	.	+	0	ID=cds2522;Parent=gene2595;Dbxref=EnsemblGenomes-Gn:YE2657,EnsemblGenomes-Tr:CAL12690,GOA:A1JTJ3,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR007895,InterPro:IPR011712,UniProtKB/TrEMBL:A1JTJ3,NCBI_GP:CAL12690.1;Name=CAL12690.1;Note=Two-component regulatory system family%2C sensor kinase protein. Similar to Salmonella typhimurium sensor protein UhpB SWALL:UHPB_SALTY (SWALL:P27668) (500 aa) fasta scores: E(): 4.6e-29%2C 37.57 38d in 495 aa%2C and to Escherichia coli O157:H7 putative sensor kinase%2Chexosephosphate transport Z0462 or ECS0417 SWALL:Q8X5I9 (EMBL:AE005216) (513 aa) fasta scores: E(): 4.4e-104%2C55.92 38d in 506 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P27668;product=sensor kinase protein;protein_id=CAL12690.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2874454	2874522	.	+	.	ID=id4672;Note=5 probable transmembrane helices predicted for YE2657 by TMHMM2.0 at aa 7-29%2C 112-134%2C 141-163%2C 183-205 and 210-232;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	2874541	2874609	.	+	.	ID=id4672;Note=5 probable transmembrane helices predicted for YE2657 by TMHMM2.0 at aa 7-29%2C 112-134%2C 141-163%2C 183-205 and 210-232;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	2874667	2874735	.	+	.	ID=id4672;Note=5 probable transmembrane helices predicted for YE2657 by TMHMM2.0 at aa 7-29%2C 112-134%2C 141-163%2C 183-205 and 210-232;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	2874748	2874816	.	+	.	ID=id4672;Note=5 probable transmembrane helices predicted for YE2657 by TMHMM2.0 at aa 7-29%2C 112-134%2C 141-163%2C 183-205 and 210-232;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	2875372	2875641	.	+	.	ID=id4673;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 66.1%2C E-value 4.8e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	2875787	2877118	.	+	.	ID=gene2596;Name=YE2658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2658
AM286415.1	EMBL	CDS	2875787	2877118	.	+	0	ID=cds2523;Parent=gene2596;Dbxref=EnsemblGenomes-Gn:YE2658,EnsemblGenomes-Tr:CAL12691,GOA:A1JTJ4,InterPro:IPR000849,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JTJ4,NCBI_GP:CAL12691.1;Name=CAL12691.1;Note=Similar to Escherichia coli regulatory protein UhpC SWALL:UHPC_ECOLI (SWALL:P09836) (439 aa) fasta scores: E(): 2.1e-90%2C 53.09 38d in 420 aa%2C and to Escherichia coli glycerol-3-phosphate transporter GlpT SWALL:GLPT_ECOLI (SWALL:P08194) (452 aa) fasta scores: E(): 3.2e-47%2C 33.18 id in 437 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P09836;product=putative transporter protein;protein_id=CAL12691.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2875865	2875924	.	+	.	ID=id4674;Note=10 probable transmembrane helices predicted for YE2658 by TMHMM2.0 at aa 27-46%2C 68-90%2C 97-128%2C 182-204%2C252-271%2C 286-308%2C 320-342%2C 347-369%2C 382-404 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	2875988	2876056	.	+	.	ID=id4674;Note=10 probable transmembrane helices predicted for YE2658 by TMHMM2.0 at aa 27-46%2C 68-90%2C 97-128%2C 182-204%2C252-271%2C 286-308%2C 320-342%2C 347-369%2C 382-404 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	2876075	2876170	.	+	.	ID=id4674;Note=10 probable transmembrane helices predicted for YE2658 by TMHMM2.0 at aa 27-46%2C 68-90%2C 97-128%2C 182-204%2C252-271%2C 286-308%2C 320-342%2C 347-369%2C 382-404 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	2876330	2876398	.	+	.	ID=id4674;Note=10 probable transmembrane helices predicted for YE2658 by TMHMM2.0 at aa 27-46%2C 68-90%2C 97-128%2C 182-204%2C252-271%2C 286-308%2C 320-342%2C 347-369%2C 382-404 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	2876540	2876599	.	+	.	ID=id4674;Note=10 probable transmembrane helices predicted for YE2658 by TMHMM2.0 at aa 27-46%2C 68-90%2C 97-128%2C 182-204%2C252-271%2C 286-308%2C 320-342%2C 347-369%2C 382-404 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	2876642	2876710	.	+	.	ID=id4674;Note=10 probable transmembrane helices predicted for YE2658 by TMHMM2.0 at aa 27-46%2C 68-90%2C 97-128%2C 182-204%2C252-271%2C 286-308%2C 320-342%2C 347-369%2C 382-404 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	2876744	2876812	.	+	.	ID=id4674;Note=10 probable transmembrane helices predicted for YE2658 by TMHMM2.0 at aa 27-46%2C 68-90%2C 97-128%2C 182-204%2C252-271%2C 286-308%2C 320-342%2C 347-369%2C 382-404 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	2876825	2876893	.	+	.	ID=id4674;Note=10 probable transmembrane helices predicted for YE2658 by TMHMM2.0 at aa 27-46%2C 68-90%2C 97-128%2C 182-204%2C252-271%2C 286-308%2C 320-342%2C 347-369%2C 382-404 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	2876930	2876998	.	+	.	ID=id4674;Note=10 probable transmembrane helices predicted for YE2658 by TMHMM2.0 at aa 27-46%2C 68-90%2C 97-128%2C 182-204%2C252-271%2C 286-308%2C 320-342%2C 347-369%2C 382-404 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	2877026	2877094	.	+	.	ID=id4674;Note=10 probable transmembrane helices predicted for YE2658 by TMHMM2.0 at aa 27-46%2C 68-90%2C 97-128%2C 182-204%2C252-271%2C 286-308%2C 320-342%2C 347-369%2C 382-404 and 414-436;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	2875880	2877106	.	+	.	ID=id4675;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -113.3%2C E-value 0.00073;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	2877238	2878269	.	+	.	ID=gene2597;Name=YE2659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2659
AM286415.1	EMBL	CDS	2877238	2878269	.	+	0	ID=cds2524;Parent=gene2597;Dbxref=EnsemblGenomes-Gn:YE2659,EnsemblGenomes-Tr:CAL12692,InterPro:IPR026045,UniProtKB/TrEMBL:A1JTJ5,NCBI_GP:CAL12692.1;Name=CAL12692.1;Note=Similar to Serratia marcescens iron(iii)-binding periplasmic protein precursor SfuA SWALL:SFUA_SERMA (SWALL:P21408) (338 aa) fasta scores: E(): 2.8e-09%2C 23.69 id in 346 aa%2C and to Escherichia coli O157:H7 periplasmic ferric iron-binding protein AfuA SWALL:Q8X5J1 (EMBL:AE005215) (343 aa) fasta scores: E(): 2.5e-116%2C84.25 38d in 343 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P21408;product=extracellular solute-binding protein;protein_id=CAL12692.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2877331	2878263	.	+	.	ID=id4676;Note=Pfam match to entry PF01547 SBP_bac_1%2C Bacterial extracellular solute-binding protein%2C score 40.4%2C E-value 2.7e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF01547
AM286415.1	EMBL	gene	2878392	2880470	.	+	.	ID=gene2598;Name=YE2660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2660
AM286415.1	EMBL	CDS	2878392	2880470	.	+	0	ID=cds2525;Parent=gene2598;Dbxref=EnsemblGenomes-Gn:YE2660,EnsemblGenomes-Tr:CAL12693,GOA:A1JTJ6,InterPro:IPR000515,UniProtKB/TrEMBL:A1JTJ6,NCBI_GP:CAL12693.1;Name=CAL12693.1;gbkey=CDS;product=putative binding protein-dependent transport system%2C inner-membrane component;protein_id=CAL12693.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2878440	2878508	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/16
AM286415.1	EMBL	sequence_feature	2878536	2878604	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/16
AM286415.1	EMBL	sequence_feature	2878641	2878709	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/16
AM286415.1	EMBL	sequence_feature	2878719	2878787	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/16
AM286415.1	EMBL	sequence_feature	2878824	2878892	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/16
AM286415.1	EMBL	sequence_feature	2878977	2879045	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/16
AM286415.1	EMBL	sequence_feature	2879082	2879150	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/16
AM286415.1	EMBL	sequence_feature	2879208	2879276	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/16
AM286415.1	EMBL	sequence_feature	2879364	2879432	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/16
AM286415.1	EMBL	sequence_feature	2879532	2879600	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/16
AM286415.1	EMBL	sequence_feature	2879661	2879729	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/16
AM286415.1	EMBL	sequence_feature	2879853	2879921	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/16
AM286415.1	EMBL	sequence_feature	2879955	2880014	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/16
AM286415.1	EMBL	sequence_feature	2880027	2880095	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=14/16
AM286415.1	EMBL	sequence_feature	2880222	2880290	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=15/16
AM286415.1	EMBL	sequence_feature	2880354	2880422	.	+	.	ID=id4677;Note=16 probable transmembrane helices predicted for YE2660 by TMHMM2.0 at aa 17-39%2C 49-71%2C 84-106%2C 110-132%2C145-167%2C 196-218%2C 231-253%2C 273-295%2C 325-347%2C 381-403%2C424-446%2C 488-510%2C 522-541%2C 546-568%2C 611-633 and 655-677;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=16/16
AM286415.1	EMBL	sequence_feature	2879286	2879504	.	+	.	ID=id4678;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 50.9%2C E-value 1.8e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	2880117	2880326	.	+	.	ID=id4679;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 39.5%2C E-value 5e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	2880496	2881587	.	+	.	ID=gene2599;Name=YE2661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2661
AM286415.1	EMBL	CDS	2880496	2881587	.	+	0	ID=cds2526;Parent=gene2599;Dbxref=EnsemblGenomes-Gn:YE2661,EnsemblGenomes-Tr:CAL12694,GOA:A1JTJ7,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR013611,InterPro:IPR015853,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTJ7,NCBI_GP:CAL12694.1;Name=CAL12694.1;Note=Similar to Actinobacillus pleuropneumoniae ferric transport ATP-binding protein AfuC SWALL:AFUC_ACTPL (SWALL:Q57293) (348 aa) fasta scores: E(): 3.6e-64%2C 60.87 id in 345 aa%2C and to Escherichia coli putative ferric transport ATP-binding protein AfuC SWALL:AFUC_ECOLI (SWALL:P37009) (348 aa) fasta scores: E(): 9.8e-93%2C 80.11 id in 347 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q57293;product=ferric transport ATP-binding protein;protein_id=CAL12694.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2880628	2881173	.	+	.	ID=id4680;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 250.9%2C E-value 1.2e-72;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2880649	2880672	.	+	.	ID=id4681;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2880943	2880987	.	+	.	ID=id4682;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	2881784	2881859	.	+	.	ID=gene2600;Name=tRNA-Asn (GTT);gbkey=Gene;gene=tRNA-Asn (GTT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2881784	2881859	.	+	.	ID=rna99;Parent=gene2600;gbkey=tRNA;gene=tRNA-Asn (GTT);product=tRNA-Asn
AM286415.1	EMBL	exon	2881784	2881859	.	+	.	ID=id4683;Parent=rna99;gbkey=tRNA;gene=tRNA-Asn (GTT);product=tRNA-Asn
AM286415.1	EMBL	gene	2882443	2883075	.	+	.	ID=gene2601;Name=YE2662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2662
AM286415.1	EMBL	CDS	2882443	2883075	.	+	0	ID=cds2527;Parent=gene2601;Dbxref=EnsemblGenomes-Gn:YE2662,EnsemblGenomes-Tr:CAL12695,GOA:A1JTJ8,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JTJ8,NCBI_GP:CAL12695.1;Name=CAL12695.1;gbkey=CDS;product=putative two-component response regulator;protein_id=CAL12695.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2882449	2882814	.	+	.	ID=id4684;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 116.6%2C E-value 3e-32;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	2882881	2883072	.	+	.	ID=id4685;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 84.9%2C E-value 1.1e-22;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	2882932	2883015	.	+	.	ID=id4686;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	sequence_feature	2882935	2883000	.	+	.	ID=id4687;Note=Predicted helix-turn-helix motif with score 1245.000%2C SD 3.43 at aa 165-186%2C sequence LSNKQIADEMFISNKTVSTYKT;gbkey=misc_feature
AM286415.1	EMBL	gene	2883050	2886874	.	+	.	ID=gene2602;Name=YE2663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2663
AM286415.1	EMBL	CDS	2883050	2886874	.	+	0	ID=cds2528;Parent=gene2602;Dbxref=EnsemblGenomes-Gn:YE2663,EnsemblGenomes-Tr:CAL12696,GOA:A1JTJ9,InterPro:IPR001638,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR008207,InterPro:IPR009082,InterPro:IPR011006,UniProtKB/TrEMBL:A1JTJ9,NCBI_GP:CAL12696.1;Name=CAL12696.1;Note=Similar to Bordetella pertussis virulence sensor protein BvgS SWALL:BVGS_BORPE (SWALL:P16575) (1238 aa) fasta scores: E(): 8.4e-91%2C 29.87 38d in 1242 aa%2C and to Bordetella bronchiseptica virulence sensor protein BvgS SWALL:BVGS_BORBR (SWALL:P26762) (1238 aa) fasta scores: E(): 1.3e-89%2C 29.23 38d in 1245 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P26762;product=putative virulence sensor protein;protein_id=CAL12696.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2884034	2884702	.	+	.	ID=id4688;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 78.1%2C E-value 1.2e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	sequence_feature	2885261	2885455	.	+	.	ID=id4689;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 67.0%2C E-value 2.7e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	2885594	2885941	.	+	.	ID=id4690;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 129.8%2C E-value 3.3e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	2886020	2886388	.	+	.	ID=id4691;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 99.9%2C E-value 3.3e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	2887252	2887782	.	+	.	ID=gene2603;Name=YE2664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2664
AM286415.1	EMBL	CDS	2887252	2887782	.	+	0	ID=cds2529;Parent=gene2603;Dbxref=EnsemblGenomes-Gn:YE2664,EnsemblGenomes-Tr:CAL12697,GOA:A1JTK0,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JTK0,NCBI_GP:CAL12697.1;Name=CAL12697.1;gbkey=CDS;product=fimbrial protein;protein_id=CAL12697.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2887321	2887779	.	+	.	ID=id4692;Note=Pfam match to entry PF00419 Fimbrial%2C Fimbrial protein%2C score 68.8%2C E-value 7.4e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00419
AM286415.1	EMBL	gene	2887875	2888609	.	+	.	ID=gene2604;Name=YE2665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2665
AM286415.1	EMBL	CDS	2887875	2888609	.	+	0	ID=cds2530;Parent=gene2604;Dbxref=EnsemblGenomes-Gn:YE2665,EnsemblGenomes-Tr:CAL12698,GOA:A1JTK1,InterPro:IPR001829,InterPro:IPR008962,InterPro:IPR016147,InterPro:IPR016148,UniProtKB/TrEMBL:A1JTK1,NCBI_GP:CAL12698.1;Name=CAL12698.1;gbkey=CDS;product=probable pili assembly chaperone;protein_id=CAL12698.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2887950	2888324	.	+	.	ID=id4693;Note=Pfam match to entry PF00345 pili_assembly%2CGram-negative pili assembly chaperone%2C N-terminal domain %2Cscore 170.4%2C E-value 2e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF00345
AM286415.1	EMBL	sequence_feature	2888340	2888600	.	+	.	ID=id4694;Note=Pfam match to entry PF02753 pili_assembly_C%2CGram-negative pili assembly chaperone%2C C-terminal domain %2Cscore 35.2%2C E-value 9.7e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF02753
AM286415.1	EMBL	gene	2888658	2891282	.	+	.	ID=gene2605;Name=YE2666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2666
AM286415.1	EMBL	CDS	2888658	2891282	.	+	0	ID=cds2531;Parent=gene2605;Dbxref=EnsemblGenomes-Gn:YE2666,EnsemblGenomes-Tr:CAL12699,GOA:A1JTK2,InterPro:IPR000015,InterPro:IPR025885,InterPro:IPR025949,UniProtKB/TrEMBL:A1JTK2,NCBI_GP:CAL12699.1;Name=CAL12699.1;gbkey=CDS;product=probable fimbrial usher protein;protein_id=CAL12699.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2888751	2891219	.	+	.	ID=id4695;Note=Pfam match to entry PF00577 Usher%2C Fimbrial Usher protein%2C score 1031.5%2C E-value 0;gbkey=misc_feature;inference=protein motif:PFAM:PF00577
AM286415.1	EMBL	gene	2891387	2892631	.	+	.	ID=gene2606;Name=YE2667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2667
AM286415.1	EMBL	CDS	2891387	2892631	.	+	0	ID=cds2532;Parent=gene2606;Dbxref=EnsemblGenomes-Gn:YE2667,EnsemblGenomes-Tr:CAL12700,GOA:A1JTK3,InterPro:IPR000259,InterPro:IPR008966,InterPro:IPR011228,UniProtKB/TrEMBL:A1JTK3,NCBI_GP:CAL12700.1;Name=CAL12700.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12700.1;transl_table=11
AM286415.1	EMBL	gene	2892628	2893368	.	+	.	ID=gene2607;Name=YE2668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2668
AM286415.1	EMBL	CDS	2892628	2893368	.	+	0	ID=cds2533;Parent=gene2607;Dbxref=EnsemblGenomes-Gn:YE2668,EnsemblGenomes-Tr:CAL12701,GOA:A1JTK4,InterPro:IPR001829,InterPro:IPR008962,InterPro:IPR016147,InterPro:IPR016148,InterPro:IPR018046,UniProtKB/TrEMBL:A1JTK4,NCBI_GP:CAL12701.1;Name=CAL12701.1;gbkey=CDS;product=probable pili assembly chaperone;protein_id=CAL12701.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2892685	2893059	.	+	.	ID=id4696;Note=Pfam match to entry PF00345 pili_assembly%2CGram-negative pili assembly chaperone%2C N-terminal domain %2Cscore 150.0%2C E-value 2.7e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF00345
AM286415.1	EMBL	sequence_feature	2892895	2892936	.	+	.	ID=id4697;Note=PS00761 Signal peptidases I signature 3.;gbkey=misc_feature;inference=protein motif:Prosite:PS00761
AM286415.1	EMBL	sequence_feature	2892916	2892969	.	+	.	ID=id4698;Note=PS00635 Gram-negative pili assembly chaperone signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00635
AM286415.1	EMBL	gene	2893538	2893613	.	+	.	ID=gene2608;Name=tRNA-Asn (GTT);gbkey=Gene;gene=tRNA-Asn (GTT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	2893538	2893613	.	+	.	ID=rna100;Parent=gene2608;gbkey=tRNA;gene=tRNA-Asn (GTT);product=tRNA-Asn
AM286415.1	EMBL	exon	2893538	2893613	.	+	.	ID=id4699;Parent=rna100;gbkey=tRNA;gene=tRNA-Asn (GTT);product=tRNA-Asn
AM286415.1	EMBL	gene	2893724	2894614	.	-	.	ID=gene2609;Name=YE2669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2669
AM286415.1	EMBL	CDS	2893724	2894614	.	-	0	ID=cds2534;Parent=gene2609;Dbxref=EnsemblGenomes-Gn:YE2669,EnsemblGenomes-Tr:CAL12702,GOA:A1JTK5,InterPro:IPR003710,InterPro:IPR008927,InterPro:IPR013328,InterPro:IPR013332,InterPro:IPR013752,InterPro:IPR016040,UniProtKB/TrEMBL:A1JTK5,NCBI_GP:CAL12702.1;Name=CAL12702.1;Note=Similar to Salmonella typhimurium 2-dehydropantoate 2-reductase PanE or ApbA SWALL:PANE_SALTY (SWALL:P37402) (303 aa) fasta scores: E(): 0.076%2C 22.26 38d in 283 aa%2Cand to Mycobacterium tuberculosis putative 2-dehydropantoate 2-reductase RV2573 or MT2649 or MTCY227.28c SWALL:PANE_MYCTU (SWALL:Q50648) (295 aa) fasta scores: E(): 3.3e-56%2C 52.57 38d in 291 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q50648;product=putative ketopantoate reductase;protein_id=CAL12702.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2893736	2894464	.	-	.	ID=id4700;Note=Pfam match to entry PF02558 ApbA%2C Ketopantoate reductase PanE/ApbA%2C score 158.6%2C E-value 6.8e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF02558
AM286415.1	EMBL	gene	2894937	2895395	.	-	.	ID=gene2610;Name=YE2669A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2669A
AM286415.1	EMBL	CDS	2894937	2895395	.	-	0	ID=cds2535;Parent=gene2610;Dbxref=EnsemblGenomes-Gn:YE2669A,EnsemblGenomes-Tr:CCP19181,GOA:K8FC65,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:K8FC65,NCBI_GP:CCP19181.1;Name=CCP19181.1;gbkey=CDS;product=putative acetyltransferase;protein_id=CCP19181.1;transl_table=11
AM286415.1	EMBL	gene	2895497	2896978	.	+	.	ID=gene2611;Name=YE2670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2670
AM286415.1	EMBL	CDS	2895497	2896978	.	+	0	ID=cds2536;Parent=gene2611;Dbxref=EnsemblGenomes-Gn:YE2670,EnsemblGenomes-Tr:CAL12703,GOA:A1JTK6,InterPro:IPR000524,InterPro:IPR004839,InterPro:IPR011991,InterPro:IPR015421,InterPro:IPR015424,UniProtKB/TrEMBL:A1JTK6,NCBI_GP:CAL12703.1;Name=CAL12703.1;gbkey=CDS;product=putative GntR-family regulatory protein;protein_id=CAL12703.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2895566	2895745	.	+	.	ID=id4701;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 44.5%2C E-value 1.6e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	gene	2897247	2897555	.	-	.	ID=gene2612;Name=YE2671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2671
AM286415.1	EMBL	CDS	2897247	2897555	.	-	0	ID=cds2537;Parent=gene2612;Dbxref=EnsemblGenomes-Gn:YE2671,EnsemblGenomes-Tr:CAL12704,GOA:A1JTK7,InterPro:IPR002198,InterPro:IPR016040,UniProtKB/TrEMBL:A1JTK7,NCBI_GP:CAL12704.1;Name=CAL12704.1;Note=Similar to the N-terminal regions of Agrobacterium tumefaciens short-chain dehydrogenase ATU5444 or AGR_PAT_651 SWALL:Q8UJN2 (EMBL:AE008965) (287 aa) fasta scores: E(): 1.3e-09%2C 48.93 38d in 94 aa%2C and Rhizobium meliloti putative oxidoreductase protein RB0207 or SMB20214 SWALL:Q92WX0 (EMBL:AL603642) (267 aa) fasta scores: E(): 2.6e-05%2C 46.47 38d in 71 aa. Possible gene remnant;gbkey=CDS;inference=similar to sequence:INSDC:AL603642;product=hypothetical protein;protein_id=CAL12704.1;transl_table=11
AM286415.1	EMBL	gene	2897703	2898287	.	+	.	ID=gene2613;Name=YE2672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2672
AM286415.1	EMBL	CDS	2897703	2898287	.	+	0	ID=cds2538;Parent=gene2613;Dbxref=EnsemblGenomes-Gn:YE2672,EnsemblGenomes-Tr:CAL12705,GOA:A1JTK8,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR015893,InterPro:IPR023772,UniProtKB/TrEMBL:A1JTK8,NCBI_GP:CAL12705.1;Name=CAL12705.1;Note=Similar to Rhizobium meliloti putative transcriptional regulator RA1038 or SMA1887 SWALL:Q92Y50 (EMBL:AE007290) (200 aa) fasta scores: E(): 2.1e-23%2C39.15 38d in 189 aa%2C and to Rhizobium loti transcriptional regulator MLR2831 SWALL:Q98HK7 (EMBL:AP003000) (193 aa) fasta scores: E(): 3.6e-22%2C 37.83 38d in 185 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003000;product=TetR family transcription regulatory protein;protein_id=CAL12705.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2897748	2897888	.	+	.	ID=id4702;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 45.2%2C E-value 9.3e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00440
AM286415.1	EMBL	sequence_feature	2897784	2897876	.	+	.	ID=id4703;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01081
AM286415.1	EMBL	gene	2898367	2899341	.	-	.	ID=gene2614;Name=YE2673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2673
AM286415.1	EMBL	CDS	2898367	2899341	.	-	0	ID=cds2539;Parent=gene2614;Dbxref=EnsemblGenomes-Gn:YE2673,EnsemblGenomes-Tr:CAL12706,GOA:A1JTK9,InterPro:IPR001789,InterPro:IPR002545,InterPro:IPR011006,InterPro:IPR024181,UniProtKB/TrEMBL:A1JTK9,NCBI_GP:CAL12706.1;Name=CAL12706.1;Note=Similar to Bacillus subtilis chemotaxis protein CheV SWALL:CHEV_BACSU (SWALL:P37599) (303 aa) fasta scores: E(): 3.7e-15%2C 29.66 38d in 300 aa%2C and to Salmonella typhimurium putative chemotaxis signal transduction protein STM2314 SWALL:Q8ZNE6 (EMBL:AE008803) (333 aa) fasta scores: E(): 1.7e-78%2C 66.87 38d in 323 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37599;product=putative chemotaxis protein;protein_id=CAL12706.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2898382	2898783	.	-	.	ID=id4704;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 45.6%2C E-value 7.3e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	2898847	2899287	.	-	.	ID=id4705;Note=Pfam match to entry PF01584 CheW%2C CheW-like domain%2C score 94.5%2C E-value 1.3e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF01584
AM286415.1	EMBL	gene	2899520	2900692	.	+	.	ID=gene2615;Name=YE2674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2674
AM286415.1	EMBL	CDS	2899520	2900692	.	+	0	ID=cds2540;Parent=gene2615;Dbxref=EnsemblGenomes-Gn:YE2674,EnsemblGenomes-Tr:CAL12707,InterPro:IPR001466,InterPro:IPR012338,UniProtKB/TrEMBL:A1JTL0,NCBI_GP:CAL12707.1;Name=CAL12707.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein PA2315 SWALL:Q9I1G0 (EMBL:AE004657) (391 aa) fasta scores: E(): 5.9e-86%2C 62.36 38d in 372 aa%2C and to Pseudomonas marginata esterase EstB SWALL:Q9KX40 (EMBL:U33634) (392 aa) fasta scores: E(): 1.2e-68%2C 51.26 id in 394 aa;gbkey=CDS;inference=similar to sequence:INSDC:U33634;product=conserved hypothetical protein;protein_id=CAL12707.1;transl_table=11
AM286415.1	EMBL	gene	2900763	2901524	.	-	.	ID=gene2616;Name=YE2675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2675
AM286415.1	EMBL	CDS	2900763	2901524	.	-	0	ID=cds2541;Parent=gene2616;Dbxref=EnsemblGenomes-Gn:YE2675,EnsemblGenomes-Tr:CAL12708,GOA:A1JTL1,InterPro:IPR001034,InterPro:IPR011991,InterPro:IPR014036,InterPro:IPR018356,UniProtKB/TrEMBL:A1JTL1,NCBI_GP:CAL12708.1;Name=CAL12708.1;Note=Similar to Pseudomonas aeruginosa glycerol-3-phosphate regulon repressor GlpR SWALL:GLPR_PSEAE (SWALL:Q51391) (251 aa) fasta scores: E(): 2.4e-17%2C 28.96 38d in 252 aa%2C and to Salmonella typhi DeoR family regulatory protein STY4412 SWALL:Q8Z1V2 (EMBL:AL627282) (252 aa) fasta scores: E(): 9e-45%2C 54.31 id in 232 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q51391;product=DeoR family regulatory protein;protein_id=CAL12708.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2900832	2901431	.	-	.	ID=id4706;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 134.2%2C E-value 1.6e-37;gbkey=misc_feature;inference=protein motif:PFAM:PF00455
AM286415.1	EMBL	gene	2901629	2902438	.	-	.	ID=gene2617;Name=YE2676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2676
AM286415.1	EMBL	CDS	2901629	2902438	.	-	0	ID=cds2542;Parent=gene2617;Dbxref=EnsemblGenomes-Gn:YE2676,EnsemblGenomes-Tr:CAL12709,GOA:A1JTL2,InterPro:IPR000150,InterPro:IPR006379,InterPro:IPR023214,UniProtKB/TrEMBL:A1JTL2,NCBI_GP:CAL12709.1;Name=CAL12709.1;Note=Similar to Listeria monocytogenes hypothetical protein LMO0272 SWALL:Q8YA87 (EMBL:AL591974) (270 aa) fasta scores: E(): 5.5e-25%2C 31.57 38d in 266 aa%2C and to Listeria innocua hypothetical protein LIN0298 SWALL:Q92F10 (EMBL:AL596164) (270 aa) fasta scores: E(): 5.5e-25%2C 31.2 id in 266 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL596164;product=putative haloacid dehalogenase-like hydrolase;protein_id=CAL12709.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2901719	2902435	.	-	.	ID=id4707;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 22.4%2C E-value 9.2e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	2902394	2902429	.	-	.	ID=id4708;Note=PS01228 Hypothetical cof family signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS01228
AM286415.1	EMBL	gene	2902618	2903457	.	-	.	ID=gene2618;Name=YE2677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2677
AM286415.1	EMBL	CDS	2902618	2903457	.	-	0	ID=cds2543;Parent=gene2618;Dbxref=EnsemblGenomes-Gn:YE2677,EnsemblGenomes-Tr:CAL12710,GOA:A1JTL3,InterPro:IPR006062,InterPro:IPR011060,InterPro:IPR013785,UniProtKB/TrEMBL:A1JTL3,NCBI_GP:CAL12710.1;Name=CAL12710.1;Note=Similar to Salmonella typhi hypothetical protein STY4414 SWALL:Q8Z1V0 (EMBL:AL627282) (279 aa) fasta scores: E(): 5.3e-78%2C 78.85 38d in 279 aa%2C and weakly similar to Methanosarcina acetivorans 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methyliden eamino] imidazole-4-carboxamide isomerase MA0218 SWALL:AAM03671 (EMBL:AE010680) (245 aa) fasta scores: E(): 0.064%2C 24.7 38d in 255 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=conserved hypothetical protein;protein_id=CAL12710.1;transl_table=11
AM286415.1	EMBL	gene	2903500	2905104	.	-	.	ID=gene2619;Name=YE2678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2678
AM286415.1	EMBL	CDS	2903500	2905104	.	-	0	ID=cds2544;Parent=gene2619;Dbxref=EnsemblGenomes-Gn:YE2678,EnsemblGenomes-Tr:CAL12711,GOA:A1JTL4,UniProtKB/TrEMBL:A1JTL4,NCBI_GP:CAL12711.1;Name=CAL12711.1;Note=Similar to Salmonella typhi putative membrane protein STY4415 SWALL:Q8Z1U9 (EMBL:AL627282) (492 aa) fasta scores: E(): 4.4e-130%2C 75.91 38d in 494 aa. C-terminal region is similar to Escherichia coli PTS system%2C fructose-like-2 IIC component FrwC SWALL:PTWC_ECOLI (SWALL:P32672) (359 aa) fasta scores: E(): 0.0007%2C 25.3 38d in 328 aa. CDS is extended at the N-terminus in comparison to the S. typhi protein. Possible alternative translational start site;gbkey=CDS;inference=similar to sequence:UniProtKB:P32672;product=putative phosphotransferase system component;protein_id=CAL12711.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2904418	2904486	.	-	.	ID=id4709;Note=8 probable transmembrane helices predicted for YE2678 by TMHMM2.0 at aa 207-229%2C 280-302%2C 309-331%2C362-384%2C 391-413%2C 423-445%2C 452-471 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	2904199	2904267	.	-	.	ID=id4709;Note=8 probable transmembrane helices predicted for YE2678 by TMHMM2.0 at aa 207-229%2C 280-302%2C 309-331%2C362-384%2C 391-413%2C 423-445%2C 452-471 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	2904112	2904180	.	-	.	ID=id4709;Note=8 probable transmembrane helices predicted for YE2678 by TMHMM2.0 at aa 207-229%2C 280-302%2C 309-331%2C362-384%2C 391-413%2C 423-445%2C 452-471 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	2903953	2904021	.	-	.	ID=id4709;Note=8 probable transmembrane helices predicted for YE2678 by TMHMM2.0 at aa 207-229%2C 280-302%2C 309-331%2C362-384%2C 391-413%2C 423-445%2C 452-471 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	2903866	2903934	.	-	.	ID=id4709;Note=8 probable transmembrane helices predicted for YE2678 by TMHMM2.0 at aa 207-229%2C 280-302%2C 309-331%2C362-384%2C 391-413%2C 423-445%2C 452-471 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	2903770	2903838	.	-	.	ID=id4709;Note=8 probable transmembrane helices predicted for YE2678 by TMHMM2.0 at aa 207-229%2C 280-302%2C 309-331%2C362-384%2C 391-413%2C 423-445%2C 452-471 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	2903692	2903751	.	-	.	ID=id4709;Note=8 probable transmembrane helices predicted for YE2678 by TMHMM2.0 at aa 207-229%2C 280-302%2C 309-331%2C362-384%2C 391-413%2C 423-445%2C 452-471 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	2903566	2903634	.	-	.	ID=id4709;Note=8 probable transmembrane helices predicted for YE2678 by TMHMM2.0 at aa 207-229%2C 280-302%2C 309-331%2C362-384%2C 391-413%2C 423-445%2C 452-471 and 491-513;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	2903719	2904492	.	-	.	ID=id4710;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score -103.1%2C E-value 0.006;gbkey=misc_feature;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	gene	2905488	2906885	.	-	.	ID=gene2620;Name=YE2679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2679
AM286415.1	EMBL	CDS	2905488	2906885	.	-	0	ID=cds2545;Parent=gene2620;Dbxref=EnsemblGenomes-Gn:YE2679,EnsemblGenomes-Tr:CAL12712,GOA:A1JTL5,InterPro:IPR002528,UniProtKB/TrEMBL:A1JTL5,NCBI_GP:CAL12712.1;Name=CAL12712.1;gbkey=CDS;product=putative sugar transporter;protein_id=CAL12712.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2906727	2906795	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	2906616	2906684	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	2906502	2906570	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	2906376	2906444	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	2906298	2906357	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	2906202	2906270	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	2906097	2906165	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	2905986	2906054	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	2905815	2905883	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	2905704	2905772	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	2905572	2905640	.	-	.	ID=id4711;Note=11 probable transmembrane helices predicted for YE2679 by TMHMM2.0 at aa 31-53%2C 68-90%2C 106-128%2C 148-170%2C177-196%2C 206-228%2C 241-263%2C 278-300%2C 335-357%2C 372-394 and 416-438;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	2905623	2906111	.	-	.	ID=id4712;Note=Pfam match to entry PF01554 UPF0013%2CUncharacterized membrane protein family UPF0013%2C score 135.3%2C E-value 7.1e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF01554
AM286415.1	EMBL	sequence_feature	2906310	2906801	.	-	.	ID=id4713;Note=Pfam match to entry PF01554 UPF0013%2CUncharacterized membrane protein family UPF0013%2C score 153.2%2C E-value 3e-43;gbkey=misc_feature;inference=protein motif:PFAM:PF01554
AM286415.1	EMBL	sequence_feature	2906397	2906429	.	-	.	ID=id4714;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2907123	2908487	.	+	.	ID=gene2621;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=YE2680
AM286415.1	EMBL	CDS	2907123	2908487	.	+	0	ID=cds2546;Parent=gene2621;Dbxref=EnsemblGenomes-Gn:YE2680,EnsemblGenomes-Tr:CAL12713,GOA:A1JTL6,InterPro:IPR001518,InterPro:IPR014729,InterPro:IPR018223,InterPro:IPR023437,InterPro:IPR024073,InterPro:IPR024074,NCBI_GP:CAL12713.1;Name=CAL12713.1;gbkey=CDS;gene=argG;product=argininosuccinate synthase;protein_id=CAL12713.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2907165	2908376	.	+	.	ID=id4715;Note=Pfam match to entry PF00764 Arginosuc_synth%2CArginosuccinate synthase%2C score 693.1%2C E-value 8.8e-206;gbkey=misc_feature;gene=argG;inference=protein motif:PFAM:PF00764
AM286415.1	EMBL	sequence_feature	2907171	2907197	.	+	.	ID=id4716;Note=PS00564 Argininosuccinate synthase signature 1.;gbkey=misc_feature;gene=argG;inference=protein motif:Prosite:PS00564
AM286415.1	EMBL	sequence_feature	2907507	2907542	.	+	.	ID=id4717;Note=PS00565 Argininosuccinate synthase signature 2.;gbkey=misc_feature;gene=argG;inference=protein motif:Prosite:PS00565
AM286415.1	EMBL	gene	2908619	2909098	.	-	.	ID=gene2622;Name=YE2681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2681
AM286415.1	EMBL	CDS	2908619	2909098	.	-	0	ID=cds2547;Parent=gene2622;Dbxref=EnsemblGenomes-Gn:YE2681,EnsemblGenomes-Tr:CAL12714,GOA:A1JTL7,InterPro:IPR007048,InterPro:IPR015801,UniProtKB/TrEMBL:A1JTL7,NCBI_GP:CAL12714.1;Name=CAL12714.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12714.1;transl_table=11
AM286415.1	EMBL	gene	2909098	2909925	.	-	.	ID=gene2623;Name=YE2682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2682
AM286415.1	EMBL	CDS	2909098	2909925	.	-	0	ID=cds2548;Parent=gene2623;Dbxref=EnsemblGenomes-Gn:YE2682,EnsemblGenomes-Tr:CAL12715,InterPro:IPR009211,UniProtKB/TrEMBL:A1JTL8,NCBI_GP:CAL12715.1;Name=CAL12715.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12715.1;transl_table=11
AM286415.1	EMBL	gene	2909951	2910793	.	-	.	ID=gene2624;Name=YE2683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2683
AM286415.1	EMBL	CDS	2909951	2910793	.	-	0	ID=cds2549;Parent=gene2624;Dbxref=EnsemblGenomes-Gn:YE2683,EnsemblGenomes-Tr:CAL12716,UniProtKB/TrEMBL:A1JTL9,NCBI_GP:CAL12716.1;Name=CAL12716.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12716.1;transl_table=11
AM286415.1	EMBL	gene	2910799	2911059	.	-	.	ID=gene2625;Name=YE2683A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2683A
AM286415.1	EMBL	CDS	2910799	2911059	.	-	0	ID=cds2550;Parent=gene2625;Dbxref=EnsemblGenomes-Gn:YE2683A,EnsemblGenomes-Tr:CCP19182,InterPro:IPR008727,UniProtKB/TrEMBL:K8FBH7,NCBI_GP:CCP19182.1;Name=CCP19182.1;gbkey=CDS;product=hypothetical exported protein;protein_id=CCP19182.1;transl_table=11
AM286415.1	EMBL	gene	2911171	2913885	.	-	.	ID=gene2626;Name=YE2684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2684
AM286415.1	EMBL	CDS	2911171	2913885	.	-	0	ID=cds2551;Parent=gene2626;Dbxref=EnsemblGenomes-Gn:YE2684,EnsemblGenomes-Tr:CAL12717,InterPro:IPR006531,InterPro:IPR006533,InterPro:IPR017847,UniProtKB/TrEMBL:A1JTM0,NCBI_GP:CAL12717.1;Name=CAL12717.1;Note=The glycine rich C-teminus which also carries multiple copies of the repeat PEPTD|PEPTV;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12717.1;transl_table=11
AM286415.1	EMBL	gene	2914034	2917867	.	-	.	ID=gene2627;Name=YE2685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2685
AM286415.1	EMBL	CDS	2914034	2917867	.	-	0	ID=cds2552;Parent=gene2627;Dbxref=EnsemblGenomes-Gn:YE2685,EnsemblGenomes-Tr:CAL12718,InterPro:IPR009612,InterPro:IPR010623,InterPro:IPR017731,InterPro:IPR025743,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTM1,NCBI_GP:CAL12718.1;Name=CAL12718.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12718.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2917751	2917819	.	-	.	ID=id4718;Note=5 probable transmembrane helices predicted for YE2685 by TMHMM2.0 at aa 17-39%2C 49-66%2C 71-90%2C 105-122 and 528-547;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2917670	2917723	.	-	.	ID=id4718;Note=5 probable transmembrane helices predicted for YE2685 by TMHMM2.0 at aa 17-39%2C 49-66%2C 71-90%2C 105-122 and 528-547;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2917598	2917657	.	-	.	ID=id4718;Note=5 probable transmembrane helices predicted for YE2685 by TMHMM2.0 at aa 17-39%2C 49-66%2C 71-90%2C 105-122 and 528-547;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2917502	2917555	.	-	.	ID=id4718;Note=5 probable transmembrane helices predicted for YE2685 by TMHMM2.0 at aa 17-39%2C 49-66%2C 71-90%2C 105-122 and 528-547;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2916227	2916286	.	-	.	ID=id4718;Note=5 probable transmembrane helices predicted for YE2685 by TMHMM2.0 at aa 17-39%2C 49-66%2C 71-90%2C 105-122 and 528-547;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	2917265	2917288	.	-	.	ID=id4719;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2917876	2919252	.	-	.	ID=gene2628;Name=YE2686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2686
AM286415.1	EMBL	CDS	2917876	2919252	.	-	0	ID=cds2553;Parent=gene2628;Dbxref=EnsemblGenomes-Gn:YE2686,EnsemblGenomes-Tr:CAL12719,InterPro:IPR006665,InterPro:IPR017732,InterPro:IPR017733,UniProtKB/TrEMBL:A1JTM2,NCBI_GP:CAL12719.1;Name=CAL12719.1;Note=Similar to Salmonella typhimurium%2C and Salmonella enterica subsp. enterica serovar Typhimurium putative outer membrane protein%2C OmpA family Stm0282 or sciP SWALL:Q93IS0 (EMBL:AE008707) (434 aa) fasta scores: E(): 3.9e-56%2C 43.95 38d in 389 aa%2C and to Salmonella enterica subsp. enterica serovar Typhi Ty2 putative membrane protein t2581 SWALL:AAO70159 (EMBL:AE016842) (433 aa) fasta scores: E(): 1.2e-55%2C 43.95 38d in 389 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE016842;product=putative OmpA family protein;protein_id=CAL12719.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2917903	2918199	.	-	.	ID=id4720;Note=Pfam match to entry PF00691 OmpA%2C OmpA family %2Cscore 103.0%2C E-value 3.8e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00691
AM286415.1	EMBL	sequence_feature	2918395	2918463	.	-	.	ID=id4721;Note=1 probable transmembrane helix predicted for YE2686 by TMHMM2.0 at aa 60-82;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2919249	2920598	.	-	.	ID=gene2629;Name=YE2687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2687
AM286415.1	EMBL	CDS	2919249	2920598	.	-	0	ID=cds2554;Parent=gene2629;Dbxref=EnsemblGenomes-Gn:YE2687,EnsemblGenomes-Tr:CAL12720,InterPro:IPR010263,UniProtKB/TrEMBL:A1JTM3,NCBI_GP:CAL12720.1;Name=CAL12720.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12720.1;transl_table=11
AM286415.1	EMBL	gene	2920602	2921153	.	-	.	ID=gene2630;Name=YE2688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2688
AM286415.1	EMBL	CDS	2920602	2921153	.	-	0	ID=cds2555;Parent=gene2630;Dbxref=EnsemblGenomes-Gn:YE2688,EnsemblGenomes-Tr:CAL12721,InterPro:IPR017734,UniProtKB/TrEMBL:A1JTM4,NCBI_GP:CAL12721.1;Name=CAL12721.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12721.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2921052	2921120	.	-	.	ID=id4722;Note=1 probable transmembrane helix predicted for YE2688 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	2921058	2921090	.	-	.	ID=id4723;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2921360	2921845	.	-	.	ID=gene2631;Name=YE2689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2689
AM286415.1	EMBL	CDS	2921360	2921845	.	-	0	ID=cds2556;Parent=gene2631;Dbxref=EnsemblGenomes-Gn:YE2689,EnsemblGenomes-Tr:CAL12722,InterPro:IPR008514,UniProtKB/TrEMBL:A1JTM5,NCBI_GP:CAL12722.1;Name=CAL12722.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12722.1;transl_table=11
AM286415.1	EMBL	gene	2922177	2923604	.	-	.	ID=gene2632;Name=YE2690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2690
AM286415.1	EMBL	CDS	2922177	2923604	.	-	0	ID=cds2557;Parent=gene2632;Dbxref=EnsemblGenomes-Gn:YE2690,EnsemblGenomes-Tr:CAL12723,InterPro:IPR010269,UniProtKB/TrEMBL:A1JTM6,NCBI_GP:CAL12723.1;Name=CAL12723.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12723.1;transl_table=11
AM286415.1	EMBL	gene	2923697	2924221	.	-	.	ID=gene2633;Name=YE2691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2691
AM286415.1	EMBL	CDS	2923697	2924221	.	-	0	ID=cds2558;Parent=gene2633;Dbxref=EnsemblGenomes-Gn:YE2691,EnsemblGenomes-Tr:CAL12724,InterPro:IPR008312,UniProtKB/TrEMBL:A1JTM7,NCBI_GP:CAL12724.1;Name=CAL12724.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12724.1;transl_table=11
AM286415.1	EMBL	gene	2924326	2924928	.	-	.	ID=gene2634;Name=YE2692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2692
AM286415.1	EMBL	CDS	2924326	2924928	.	-	0	ID=cds2559;Parent=gene2634;Dbxref=EnsemblGenomes-Gn:YE2692,EnsemblGenomes-Tr:CAL12725,GOA:A1JTM8,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JTM8,NCBI_GP:CAL12725.1;Name=CAL12725.1;gbkey=CDS;product=fimbrial protein;protein_id=CAL12725.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2924329	2924799	.	-	.	ID=id4724;Note=Pfam match to entry PF00419 Fimbrial%2C Fimbrial protein%2C score 55.3%2C E-value 8.8e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00419
AM286415.1	EMBL	sequence_feature	2924851	2924910	.	-	.	ID=id4725;Note=1 probable transmembrane helix predicted for YE2692 by TMHMM2.0 at aa 7-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2924913	2927588	.	-	.	ID=gene2635;Name=YE2693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2693
AM286415.1	EMBL	CDS	2924913	2927588	.	-	0	ID=cds2560;Parent=gene2635;Dbxref=EnsemblGenomes-Gn:YE2693,EnsemblGenomes-Tr:CAL12726,GOA:A1JTM9,InterPro:IPR000015,InterPro:IPR025885,InterPro:IPR025949,UniProtKB/TrEMBL:A1JTM9,NCBI_GP:CAL12726.1;Name=CAL12726.1;gbkey=CDS;product=outer membrane usher protein;protein_id=CAL12726.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2924982	2927411	.	-	.	ID=id4726;Note=Pfam match to entry PF00577 Usher%2C Fimbrial Usher protein%2C score 766.5%2C E-value 7.2e-228;gbkey=misc_feature;inference=protein motif:PFAM:PF00577
AM286415.1	EMBL	gene	2927692	2928489	.	-	.	ID=gene2636;Name=YE2694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2694
AM286415.1	EMBL	CDS	2927692	2928489	.	-	0	ID=cds2561;Parent=gene2636;Dbxref=EnsemblGenomes-Gn:YE2694,EnsemblGenomes-Tr:CAL12727,GOA:A1JTN0,InterPro:IPR001829,InterPro:IPR008962,InterPro:IPR016147,InterPro:IPR016148,InterPro:IPR018046,UniProtKB/TrEMBL:A1JTN0,NCBI_GP:CAL12727.1;Name=CAL12727.1;gbkey=CDS;product=putative pili chaperone protein;protein_id=CAL12727.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2927731	2927994	.	-	.	ID=id4727;Note=Pfam match to entry PF02753 pili_assembly_C%2CGram-negative pili assembly chaperone%2C C-terminal domain %2Cscore 52.3%2C E-value 7e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF02753
AM286415.1	EMBL	sequence_feature	2928004	2928375	.	-	.	ID=id4728;Note=Pfam match to entry PF00345 pili_assembly%2CGram-negative pili assembly chaperone%2C N-terminal domain %2Cscore 203.6%2C E-value 1.9e-58;gbkey=misc_feature;inference=protein motif:PFAM:PF00345
AM286415.1	EMBL	sequence_feature	2928091	2928144	.	-	.	ID=id4729;Note=PS00635 Gram-negative pili assembly chaperone signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00635
AM286415.1	EMBL	sequence_feature	2928388	2928456	.	-	.	ID=id4730;Note=1 probable transmembrane helix predicted for YE2694 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2928597	2929157	.	-	.	ID=gene2637;Name=YE2695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2695
AM286415.1	EMBL	CDS	2928597	2929157	.	-	0	ID=cds2562;Parent=gene2637;Dbxref=EnsemblGenomes-Gn:YE2695,EnsemblGenomes-Tr:CAL12728,GOA:A1JTN1,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JTN1,NCBI_GP:CAL12728.1;Name=CAL12728.1;gbkey=CDS;product=frimbrial protein;protein_id=CAL12728.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2928600	2929073	.	-	.	ID=id4731;Note=Pfam match to entry PF00419 Fimbrial%2C Fimbrial protein%2C score 77.8%2C E-value 1.4e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00419
AM286415.1	EMBL	sequence_feature	2929080	2929139	.	-	.	ID=id4732;Note=1 probable transmembrane helix predicted for YE2695 by TMHMM2.0 at aa 7-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2929324	2931996	.	-	.	ID=gene2638;Name=clpB5;gbkey=Gene;gene=clpB5;gene_biotype=protein_coding;locus_tag=YE2696
AM286415.1	EMBL	CDS	2929324	2931996	.	-	0	ID=cds2563;Parent=gene2638;Dbxref=EnsemblGenomes-Gn:YE2696,EnsemblGenomes-Tr:CAL12729,GOA:A1JTN2,InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR017729,InterPro:IPR018368,InterPro:IPR019489,InterPro:IPR023150,InterPro:IPR027417,InterPro:IPR028299,UniProtKB/TrEMBL:A1JTN2,NCBI_GP:CAL12729.1;Name=CAL12729.1;gbkey=CDS;gene=clpB5;product=Clp ATPase;protein_id=CAL12729.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2930098	2930121	.	-	.	ID=id4733;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=clpB5;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2930785	2931309	.	-	.	ID=id4734;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 36.5%2C E-value 3.9e-08;gbkey=misc_feature;gene=clpB5;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	2930992	2931030	.	-	.	ID=id4735;Note=PS00870 Chaperonins clpA/B signature 1.;gbkey=misc_feature;gene=clpB5;inference=protein motif:Prosite:PS00870
AM286415.1	EMBL	sequence_feature	2931271	2931294	.	-	.	ID=id4736;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=clpB5;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2932716	2934596	.	+	.	ID=gene2639;Name=YE2697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2697
AM286415.1	EMBL	CDS	2932716	2934596	.	+	0	ID=cds2564;Parent=gene2639;Dbxref=EnsemblGenomes-Gn:YE2697,EnsemblGenomes-Tr:CAL12730,InterPro:IPR010272,UniProtKB/TrEMBL:A1JTN6,NCBI_GP:CAL12730.1;Name=CAL12730.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12730.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2933274	2933303	.	+	.	ID=id4737;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	2934596	2935621	.	+	.	ID=gene2640;Name=YE2698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2698
AM286415.1	EMBL	CDS	2934596	2935621	.	+	0	ID=cds2565;Parent=gene2640;Dbxref=EnsemblGenomes-Gn:YE2698,EnsemblGenomes-Tr:CAL12731,InterPro:IPR010732,UniProtKB/TrEMBL:A1JTN9,NCBI_GP:CAL12731.1;Name=CAL12731.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12731.1;transl_table=11
AM286415.1	EMBL	gene	2935696	2936859	.	+	.	ID=gene2641;Name=YE2699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2699
AM286415.1	EMBL	CDS	2935696	2936859	.	+	0	ID=cds2566;Parent=gene2641;Dbxref=EnsemblGenomes-Gn:YE2699,EnsemblGenomes-Tr:CAL12732,InterPro:IPR010657,UniProtKB/TrEMBL:A1JTP1,NCBI_GP:CAL12732.1;Name=CAL12732.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12732.1;transl_table=11
AM286415.1	EMBL	gene	2936866	2937870	.	+	.	ID=gene2642;Name=YE2700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2700
AM286415.1	EMBL	CDS	2936866	2937870	.	+	0	ID=cds2567;Parent=gene2642;Dbxref=EnsemblGenomes-Gn:YE2700,EnsemblGenomes-Tr:CAL12733,GOA:A1JTP2,InterPro:IPR000259,InterPro:IPR008966,UniProtKB/TrEMBL:A1JTP2,NCBI_GP:CAL12733.1;Name=CAL12733.1;gbkey=CDS;product=putative fimbrial protein;protein_id=CAL12733.1;transl_table=11
AM286415.1	EMBL	gene	2937909	2939246	.	+	.	ID=gene2643;Name=YE2701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2701
AM286415.1	EMBL	CDS	2937909	2939246	.	+	0	ID=cds2568;Parent=gene2643;Dbxref=EnsemblGenomes-Gn:YE2701,EnsemblGenomes-Tr:CAL12734,InterPro:IPR021067,InterPro:IPR029044,UniProtKB/TrEMBL:A1JTP3,NCBI_GP:CAL12734.1;Name=CAL12734.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12734.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2938602	2938622	.	+	.	ID=id4738;Note=PS00290 Immunoglobulins and major histocompatibility complex proteins signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00290
AM286415.1	EMBL	gene	2939243	2939890	.	+	.	ID=gene2644;Name=YE2702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2702
AM286415.1	EMBL	CDS	2939243	2939890	.	+	0	ID=cds2569;Parent=gene2644;Dbxref=EnsemblGenomes-Gn:YE2702,EnsemblGenomes-Tr:CAL12735,UniProtKB/TrEMBL:A1JTP4,NCBI_GP:CAL12735.1;Name=CAL12735.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12735.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2939795	2939863	.	+	.	ID=id4739;Note=1 probable transmembrane helix predicted for YE2702 by TMHMM2.0 at aa 185-207;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	2939891	2941561	.	+	.	ID=gene2645;Name=YE2703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2703
AM286415.1	EMBL	CDS	2939891	2941561	.	+	0	ID=cds2570;Parent=gene2645;Dbxref=EnsemblGenomes-Gn:YE2703,EnsemblGenomes-Tr:CAL12736,GOA:A1JTP5,InterPro:IPR006664,InterPro:IPR006665,UniProtKB/TrEMBL:A1JTP5,NCBI_GP:CAL12736.1;Name=CAL12736.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12736.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2939918	2939971	.	+	.	ID=id4740;Note=2 probable transmembrane helices predicted for YE2703 by TMHMM2.0 at aa 10-27 and 32-54;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	2939984	2940052	.	+	.	ID=id4740;Note=2 probable transmembrane helices predicted for YE2703 by TMHMM2.0 at aa 10-27 and 32-54;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	2941214	2941510	.	+	.	ID=id4741;Note=Pfam match to entry PF00691 OmpA%2C OmpA family %2Cscore 87.7%2C E-value 1.6e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00691
AM286415.1	EMBL	gene	2941568	2942053	.	+	.	ID=gene2646;Name=YE2704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2704
AM286415.1	EMBL	CDS	2941568	2942053	.	+	0	ID=cds2571;Parent=gene2646;Dbxref=EnsemblGenomes-Gn:YE2704,EnsemblGenomes-Tr:CAL12737,InterPro:IPR014894,InterPro:IPR016123,UniProtKB/TrEMBL:A1JTP6,NCBI_GP:CAL12737.1;Name=CAL12737.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12737.1;transl_table=11
AM286415.1	EMBL	gene	2942187	2942789	.	-	.	ID=gene2647;Name=YE2705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2705
AM286415.1	EMBL	CDS	2942187	2942789	.	-	0	ID=cds2572;Parent=gene2647;Dbxref=EnsemblGenomes-Gn:YE2705,EnsemblGenomes-Tr:CAL12738,GOA:A1JTP7,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JTP7,NCBI_GP:CAL12738.1;Name=CAL12738.1;gbkey=CDS;product=putative luxR-family regulatory protein;protein_id=CAL12738.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2942214	2942411	.	-	.	ID=id4742;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 38.4%2C E-value 1.1e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	pseudogene	2943688	2944173	.	-	.	ID=gene2648;Name=YE2706;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE2706;pseudo=true
AM286415.1	EMBL	CDS	2943937	2944173	.	-	0	ID=cds2573;Parent=gene2648;Note=No significant database matches to the full length CDS. N-terminus is similar to the N-terminal region of Escherichia coli xanthosine operon regulatory protein XapR or PndR SWALL:XAPR_ECOLI (SWALL:P23841) (294 aa) fasta scores: E(): 5.1e-05%2C 70.27 38d in 37 aa. C-terminus is similar to an internal region of Escherichia coli xanthosine permease XapB SWALL:XAPB_ECOLI (SWALL:P45562) (418 aa) fasta scores: E(): 4.7e-21%2C 57.72 38d in 123 aa. CDS appears to be a fusion protein%2C possibly resulting from a deletion event. Region that is similar to the permease contains frameshifts after codons 79 and 131;gbkey=CDS;inference=similar to sequence:UniProtKB:P45562;product=transcription regulator/permease fusion protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2943782	2943937	.	-	0	ID=cds2573;Parent=gene2648;Note=No significant database matches to the full length CDS. N-terminus is similar to the N-terminal region of Escherichia coli xanthosine operon regulatory protein XapR or PndR SWALL:XAPR_ECOLI (SWALL:P23841) (294 aa) fasta scores: E(): 5.1e-05%2C 70.27 38d in 37 aa. C-terminus is similar to an internal region of Escherichia coli xanthosine permease XapB SWALL:XAPB_ECOLI (SWALL:P45562) (418 aa) fasta scores: E(): 4.7e-21%2C 57.72 38d in 123 aa. CDS appears to be a fusion protein%2C possibly resulting from a deletion event. Region that is similar to the permease contains frameshifts after codons 79 and 131;gbkey=CDS;inference=similar to sequence:UniProtKB:P45562;product=transcription regulator/permease fusion protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	2943688	2943783	.	-	0	ID=cds2573;Parent=gene2648;Note=No significant database matches to the full length CDS. N-terminus is similar to the N-terminal region of Escherichia coli xanthosine operon regulatory protein XapR or PndR SWALL:XAPR_ECOLI (SWALL:P23841) (294 aa) fasta scores: E(): 5.1e-05%2C 70.27 38d in 37 aa. C-terminus is similar to an internal region of Escherichia coli xanthosine permease XapB SWALL:XAPB_ECOLI (SWALL:P45562) (418 aa) fasta scores: E(): 4.7e-21%2C 57.72 38d in 123 aa. CDS appears to be a fusion protein%2C possibly resulting from a deletion event. Region that is similar to the permease contains frameshifts after codons 79 and 131;gbkey=CDS;inference=similar to sequence:UniProtKB:P45562;product=transcription regulator/permease fusion protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2943934	2944065	.	-	.	ID=id4743;Note=Pfam match to entry PF03825 Nuc_H_symport%2CNucleoside H+ symporter%2C score 50.0%2C E-value 3.8e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF03825
AM286415.1	EMBL	sequence_feature	2943964	2944023	.	-	.	ID=id4744;Note=1 probable transmembrane helix predicted for YE2706 by TMHMM2.0 at aa 51-70;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	2943997	2944173	.	-	.	ID=id4745;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 24.0%2C E-value 2.4e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	2944069	2944134	.	-	.	ID=id4746;Note=Predicted helix-turn-helix motif with score 1249.000%2C SD 3.44 at aa 14-35%2C sequence LHFGKAAERLHISQPPFSLQIK;gbkey=misc_feature
AM286415.1	EMBL	operon	2944349	2984439	.	+	.	ID=id4747;gbkey=operon;operon=pdu-cob
AM286415.1	EMBL	gene	2965247	2965543	.	+	.	ID=gene2649;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=YE2728
AM286415.1	EMBL	CDS	2965247	2965543	.	+	0	ID=cds2574;Parent=gene2649;Dbxref=EnsemblGenomes-Gn:YE2728,EnsemblGenomes-Tr:CAL12762,InterPro:IPR000249,InterPro:IPR020808,UniProtKB/TrEMBL:A1JTS0,NCBI_GP:CAL12762.1;Name=CAL12762.1;Note=Similar to Salmonella typhimurium%2C and Salmonella typhi propanediol utilization protein PduA or STY2243 SWALL:PDUA_SALTY (SWALL:P37448) (94 aa) fasta scores: E(): 5.8e-26%2C 89.01 38d in 91 aa%2C and to Listeria innocua hypothetical protein LIN1123 SWALL:Q92CP8 (EMBL:AL596167) (91 aa) fasta scores: E(): 1.2e-23%2C 83.9 38d in 87 aa;gbkey=CDS;gene=pduA;inference=similar to sequence:UniProtKB:P37448;operon=pdu-cob;product=putative propanediol utilization protein;protein_id=CAL12762.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2965253	2965513	.	+	.	ID=id4748;Note=Pfam match to entry PF00936 Bact_microcomp%2CBacterial microcompartments protein family%2C score 195.1%2CE-value 7e-56;gbkey=misc_feature;gene=pduA;inference=protein motif:PFAM:PF00936
AM286415.1	EMBL	sequence_feature	2965310	2965369	.	+	.	ID=id4749;Note=PS01139 Bacterial microcompartiments proteins signature.;gbkey=misc_feature;gene=pduA;inference=protein motif:Prosite:PS01139
AM286415.1	EMBL	gene	2965543	2966370	.	+	.	ID=gene2650;Name=pduB;gbkey=Gene;gene=pduB;gene_biotype=protein_coding;locus_tag=YE2729
AM286415.1	EMBL	CDS	2965543	2966370	.	+	0	ID=cds2575;Parent=gene2650;Dbxref=EnsemblGenomes-Gn:YE2729,EnsemblGenomes-Tr:CAL12763,GOA:A1JTS1,InterPro:IPR000249,InterPro:IPR009193,UniProtKB/TrEMBL:A1JTS1,NCBI_GP:CAL12763.1;Name=CAL12763.1;Note=Similar to Salmonella typhimurium propanediol utilization protein PduB SWALL:PDUB_SALTY (SWALL:P37449) (233 aa) fasta scores: E(): 9.5e-75%2C 90.98 38d in 233 aa%2Cand to Salmonella typhi putative propanediol utilization protein STY2244 SWALL:Q8Z5M3 (EMBL:AL627273) (233 aa) fasta scores: E(): 8.3e-75%2C 91.41 38d in 233 aa. Possible alternative translational start site;gbkey=CDS;gene=pduB;inference=similar to sequence:UniProtKB:P37449;operon=pdu-cob;product=putative propanediol utilization protein;protein_id=CAL12763.1;transl_table=11
AM286415.1	EMBL	gene	2966391	2968055	.	+	.	ID=gene2651;Name=pduC;gbkey=Gene;gene=pduC;gene_biotype=protein_coding;gene_synonym=pddA;locus_tag=YE2730
AM286415.1	EMBL	CDS	2966391	2968055	.	+	0	ID=cds2576;Parent=gene2651;Dbxref=EnsemblGenomes-Gn:YE2730,EnsemblGenomes-Tr:CAL12764,GOA:A1JTS2,InterPro:IPR003206,InterPro:IPR016176,UniProtKB/TrEMBL:A1JTS2,NCBI_GP:CAL12764.1;Name=CAL12764.1;Note=Similar to Salmonella typhimurium glycerol dehydratase large subunit PduC SWALL:DHAB_SALTY (SWALL:P37450) (554 aa) fasta scores: E(): 2e-206%2C 94.21 id in 553 aa%2C and to Klebsiella oxytoca diol dehydrase PddA SWALL:Q59470 (EMBL:D45071) (554 aa) fasta scores: E(): 1.8e-206%2C 94.21 38d in 553 aa;gbkey=CDS;gene=pduC;inference=similar to sequence:UniProtKB:P37450;operon=pdu-cob;product=putative propanediol utilization protein: dehydratase%2C large subunit;protein_id=CAL12764.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2966391	2968052	.	+	.	ID=id4750;Note=Pfam match to entry PF02286 Dehydratase_LU%2CDehydratase large subunit%2C score 1473.5%2C E-value 0;gbkey=misc_feature;gene=pduC;inference=protein motif:PFAM:PF02286
AM286415.1	EMBL	sequence_feature	2967264	2967296	.	+	.	ID=id4751;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pduC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2968068	2968739	.	+	.	ID=gene2652;Name=pduD;gbkey=Gene;gene=pduD;gene_biotype=protein_coding;gene_synonym=pddB;locus_tag=YE2731
AM286415.1	EMBL	CDS	2968068	2968739	.	+	0	ID=cds2577;Parent=gene2652;Dbxref=EnsemblGenomes-Gn:YE2731,EnsemblGenomes-Tr:CAL12765,GOA:A1JTS3,InterPro:IPR003208,InterPro:IPR010254,InterPro:IPR025541,UniProtKB/TrEMBL:A1JTS3,NCBI_GP:CAL12765.1;Name=CAL12765.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: dehydratase%2C medium subunit PduD SWALL:O31041 (EMBL:AE008790) (224 aa) fasta scores: E(): 2.9e-69%2C 86.6 38d in 224 aa%2C and to Klebsiella oxytoca diol dehydrase PddB SWALL:Q59471 (EMBL:D45071) (224 aa) fasta scores: E(): 6.1e-69%2C 86.6 38d in 224 aa;gbkey=CDS;gene=pduD;inference=similar to sequence:INSDC:D45071;operon=pdu-cob;product=putative propanediol utilization protein: dehydratase%2C medium subunit;protein_id=CAL12765.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2968206	2968730	.	+	.	ID=id4752;Note=Pfam match to entry PF02288 Dehydratase_MU%2CDehydratase medium subunit%2C score 425.8%2C E-value 2.6e-125;gbkey=misc_feature;gene=pduD;inference=protein motif:PFAM:PF02288
AM286415.1	EMBL	gene	2968754	2969278	.	+	.	ID=gene2653;Name=pduE;gbkey=Gene;gene=pduE;gene_biotype=protein_coding;gene_synonym=pddC;locus_tag=YE2732
AM286415.1	EMBL	CDS	2968754	2969278	.	+	0	ID=cds2578;Parent=gene2653;Dbxref=EnsemblGenomes-Gn:YE2732,EnsemblGenomes-Tr:CAL12766,GOA:A1JTS4,InterPro:IPR003207,UniProtKB/TrEMBL:A1JTS4,NCBI_GP:CAL12766.1;Name=CAL12766.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: dehydratase%2C small subunit PduE SWALL:O31042 (EMBL:AE008790) (173 aa) fasta scores: E(): 3.7e-47%2C 78.73 38d in 174 aa%2C and to Klebsiella oxytoca diol dehydrase PddC SWALL:Q59472 (EMBL:D45071) (173 aa) fasta scores: E(): 2.8e-47%2C 78.16 38d in 174 aa;gbkey=CDS;gene=pduE;inference=similar to sequence:INSDC:D45071;operon=pdu-cob;product=putative propanediol utilization protein: dehydratase%2C small subunit;protein_id=CAL12766.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2968853	2969266	.	+	.	ID=id4753;Note=Pfam match to entry PF02287 Dehydratase_SU%2CDehydratase small subunit%2C score 304.8%2C E-value 6.6e-89;gbkey=misc_feature;gene=pduE;inference=protein motif:PFAM:PF02287
AM286415.1	EMBL	gene	2969606	2971432	.	+	.	ID=gene2654;Name=pduG;gbkey=Gene;gene=pduG;gene_biotype=protein_coding;gene_synonym=ddrA;locus_tag=YE2733
AM286415.1	EMBL	CDS	2969606	2971432	.	+	0	ID=cds2579;Parent=gene2654;Dbxref=EnsemblGenomes-Gn:YE2733,EnsemblGenomes-Tr:CAL12767,InterPro:IPR009191,InterPro:IPR028975,UniProtKB/TrEMBL:A1JTS5,NCBI_GP:CAL12767.1;Name=CAL12767.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: diol dehydratase reactivation PduG SWALL:O31043 (EMBL:AE008790) (610 aa) fasta scores: E(): 8.3e-170%2C 81.81 38d in 605 aa%2C and to Klebsiella oxytoca diol dehydratase-reactivating factor large subunit DdrA SWALL:O68195 (EMBL:AF017781) (610 aa) fasta scores: E(): 1.8e-169%2C 81.81 38d in 605 aa;gbkey=CDS;gene=pduG;inference=similar to sequence:INSDC:AF017781;operon=pdu-cob;product=putative propanediol utilization protein: diol dehydratase reactivation;protein_id=CAL12767.1;transl_table=11
AM286415.1	EMBL	gene	2971429	2971770	.	+	.	ID=gene2655;Name=pduH;gbkey=Gene;gene=pduH;gene_biotype=protein_coding;gene_synonym=ddrB;locus_tag=YE2734
AM286415.1	EMBL	CDS	2971429	2971770	.	+	0	ID=cds2580;Parent=gene2655;Dbxref=EnsemblGenomes-Gn:YE2734,EnsemblGenomes-Tr:CAL12768,InterPro:IPR003208,InterPro:IPR009192,InterPro:IPR010254,UniProtKB/TrEMBL:A1JTS6,NCBI_GP:CAL12768.1;Name=CAL12768.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: diol dehydratase reactivation PduH SWALL:Q8ZNR6 (EMBL:AE008790) (116 aa) fasta scores: E(): 2.2e-19%2C 50.44 38d in 113 aa%2C and to Klebsiella oxytoca diol dehydratase-reactivating factor small subunit DdrB SWALL:O68196 (EMBL:AF017781) (125 aa) fasta scores: E(): 3e-18%2C 48.67 38d in 113 aa;gbkey=CDS;gene=pduH;inference=similar to sequence:INSDC:AF017781;operon=pdu-cob;product=putative propanediol utilization protein: diol dehydratase reactivation;protein_id=CAL12768.1;transl_table=11
AM286415.1	EMBL	gene	2971802	2972077	.	+	.	ID=gene2656;Name=pduA;gbkey=Gene;gene=pduA;gene_biotype=protein_coding;locus_tag=YE2735
AM286415.1	EMBL	CDS	2971802	2972077	.	+	0	ID=cds2581;Parent=gene2656;Dbxref=EnsemblGenomes-Gn:YE2735,EnsemblGenomes-Tr:CAL12769,InterPro:IPR000249,InterPro:IPR020808,UniProtKB/TrEMBL:A1JTS7,NCBI_GP:CAL12769.1;Name=CAL12769.1;Note=Similar to Salmonella typhimurium and Salmonella typhi propanediol utilization protein PduA or STY2243 SWALL:PDUA_SALTY (SWALL:P37448) (94 aa) fasta scores: E(): 5.7e-23%2C 84.7 38d in 85 aa%2C and to Salmonella typhimurium ethanolamine utilization protein EutM or CchA SWALL:EUTM_SALTY (SWALL:P41791) (96 aa) fasta scores: E(): 6.6e-18%2C 66.66 38d in 87 aa;gbkey=CDS;gene=pduA;inference=similar to sequence:UniProtKB:P41791;operon=pdu-cob;product=putative propanediol utilization protein;protein_id=CAL12769.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2971805	2972065	.	+	.	ID=id4754;Note=Pfam match to entry PF00936 Bact_microcomp%2CBacterial microcompartments protein family%2C score 196.2%2CE-value 3.4e-56;gbkey=misc_feature;gene=pduA;inference=protein motif:PFAM:PF00936
AM286415.1	EMBL	sequence_feature	2971862	2971921	.	+	.	ID=id4755;Note=PS01139 Bacterial microcompartiments proteins signature.;gbkey=misc_feature;gene=pduA;inference=protein motif:Prosite:PS01139
AM286415.1	EMBL	gene	2972099	2972701	.	+	.	ID=gene2657;Name=pduK;gbkey=Gene;gene=pduK;gene_biotype=protein_coding;locus_tag=YE2736
AM286415.1	EMBL	CDS	2972099	2972701	.	+	0	ID=cds2582;Parent=gene2657;Dbxref=EnsemblGenomes-Gn:YE2736,EnsemblGenomes-Tr:CAL12770,InterPro:IPR000249,UniProtKB/TrEMBL:A1JTS8,NCBI_GP:CAL12770.1;Name=CAL12770.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: polyhedral bodies PduK SWALL:Q9XDN6 (EMBL:AE008790) (160 aa) fasta scores: E(): 5.1e-17%2C47.23 38d in 199 aa%2C and to Listeria monocytogenes hypothetical protein LMO1158 SWALL:Q8Y7W1 (EMBL:AL591978) (145 aa) fasta scores: E(): 1.7e-09%2C 30.76 38d in 195 aa. CDS contains extra residues relative to orthologues;gbkey=CDS;gene=pduK;inference=similar to sequence:INSDC:AL591978;operon=pdu-cob;product=putative propanediol utilization protein: polyhedral bodies;protein_id=CAL12770.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2972102	2972365	.	+	.	ID=id4756;Note=Pfam match to entry PF00936 Bact_microcomp%2CBacterial microcompartments protein family%2C score 56.3%2CE-value 4.3e-14;gbkey=misc_feature;gene=pduK;inference=protein motif:PFAM:PF00936
AM286415.1	EMBL	gene	2972701	2973348	.	+	.	ID=gene2658;Name=pduL;gbkey=Gene;gene=pduL;gene_biotype=protein_coding;locus_tag=YE2737
AM286415.1	EMBL	CDS	2972701	2973348	.	+	0	ID=cds2583;Parent=gene2658;Dbxref=EnsemblGenomes-Gn:YE2737,EnsemblGenomes-Tr:CAL12771,GOA:A1JTS9,InterPro:IPR008300,UniProtKB/TrEMBL:A1JTS9,NCBI_GP:CAL12771.1;Name=CAL12771.1;Note=Similar to Salmonella typhimurium propanediol utilization protein PduL: SWALL:Q9XDN5 (EMBL:AE008790) (210 aa) fasta scores: E(): 2e-58%2C 77.29 38d in 207 aa%2Cand to Listeria innocua hypothetical protein LIN1124 SWALL:Q92CP7 (EMBL:AL596167) (211 aa) fasta scores: E(): 3.2e-34%2C 50.71 38d in 211 aa;gbkey=CDS;gene=pduL;inference=similar to sequence:INSDC:AL596167;operon=pdu-cob;product=putative propanediol utilization protein;protein_id=CAL12771.1;transl_table=11
AM286415.1	EMBL	gene	2973345	2973842	.	+	.	ID=gene2659;Name=pduM;gbkey=Gene;gene=pduM;gene_biotype=protein_coding;locus_tag=YE2738
AM286415.1	EMBL	CDS	2973345	2973842	.	+	0	ID=cds2584;Parent=gene2659;Dbxref=EnsemblGenomes-Gn:YE2738,EnsemblGenomes-Tr:CAL12772,UniProtKB/TrEMBL:A1JTT0,NCBI_GP:CAL12772.1;Name=CAL12772.1;Note=Similar to Salmonella typhimurium propanediol utilization protein PduM SWALL:Q9XDN4 (EMBL:AE008790) (163 aa) fasta scores: E(): 3.7e-20%2C 40.12 38d in 157 aa%2C and to Salmonella typhi hypothetical protein STY2253 SWALL:Q8Z5L5 (EMBL:AL627273) (163 aa) fasta scores: E(): 9.6e-20%2C 39.49 38d in 157 aa;gbkey=CDS;gene=pduM;inference=similar to sequence:INSDC:AL627273;operon=pdu-cob;product=putative propanediol utilization protein;protein_id=CAL12772.1;transl_table=11
AM286415.1	EMBL	gene	2973846	2974121	.	+	.	ID=gene2660;Name=pduN;gbkey=Gene;gene=pduN;gene_biotype=protein_coding;locus_tag=YE2739
AM286415.1	EMBL	CDS	2973846	2974121	.	+	0	ID=cds2585;Parent=gene2660;Dbxref=EnsemblGenomes-Gn:YE2739,EnsemblGenomes-Tr:CAL12773,InterPro:IPR004992,InterPro:IPR023414,UniProtKB/TrEMBL:A1JTT1,NCBI_GP:CAL12773.1;Name=CAL12773.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: polyhedral bodies PduN SWALL:Q9XDN3 (EMBL:AE008790) (91 aa) fasta scores: E(): 2.5e-21%2C 74.44 id in 90 aa%2C and to Listeria monocytogenes hypothetical protein LMO1163 SWALL:Q8Y7V6 (EMBL:AL591978) (87 aa) fasta scores: E(): 4e-12%2C 55.17 38d in 87 aa;gbkey=CDS;gene=pduN;inference=similar to sequence:INSDC:AL591978;operon=pdu-cob;product=putative propanediol utilization protein: polyhedral bodies;protein_id=CAL12773.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2973846	2974118	.	+	.	ID=id4757;Note=Pfam match to entry PF03319 EutN_CcmL%2C Ethanolamine utilization protein EutN/carboxysome structural protein Ccml%2C score 121.7%2C E-value 8.8e-34;gbkey=misc_feature;gene=pduN;inference=protein motif:PFAM:PF03319
AM286415.1	EMBL	gene	2974137	2975153	.	+	.	ID=gene2661;Name=pduO;gbkey=Gene;gene=pduO;gene_biotype=protein_coding;locus_tag=YE2740
AM286415.1	EMBL	CDS	2974137	2975153	.	+	0	ID=cds2586;Parent=gene2661;Dbxref=EnsemblGenomes-Gn:YE2740,EnsemblGenomes-Tr:CAL12774,InterPro:IPR005624,InterPro:IPR009221,InterPro:IPR016030,InterPro:IPR029499,UniProtKB/TrEMBL:A1JTT2,NCBI_GP:CAL12774.1;Name=CAL12774.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: B12 related PduO SWALL:Q8ZNR5 (EMBL:AE008790) (336 aa) fasta scores: E(): 2.6e-77%2C63.28 38d in 335 aa%2C and to Listeria innocua highly similar to salmonella enterica PduO protein LIN1128 SWALL:Q92CP3 (EMBL:AL596167) (331 aa) fasta scores: E(): 1e-57%2C 49.7 38d in 334 aa;gbkey=CDS;gene=pduO;inference=similar to sequence:INSDC:AL596167;operon=pdu-cob;product=putative propanediol utilization protein: B12 related;protein_id=CAL12774.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2974143	2974646	.	+	.	ID=id4758;Note=Pfam match to entry PF01923 DUF80%2C Protein of unknown function DUF80%2C score 200.5%2C E-value 1.7e-57;gbkey=misc_feature;gene=pduO;inference=protein motif:PFAM:PF01923
AM286415.1	EMBL	sequence_feature	2974737	2975135	.	+	.	ID=id4759;Note=Pfam match to entry PF03928 DUF336%2C Domain of unknown function (DUF336)%2C score 51.5%2C E-value 1.2e-12;gbkey=misc_feature;gene=pduO;inference=protein motif:PFAM:PF03928
AM286415.1	EMBL	gene	2975153	2976541	.	+	.	ID=gene2662;Name=pduP;gbkey=Gene;gene=pduP;gene_biotype=protein_coding;locus_tag=YE2741
AM286415.1	EMBL	CDS	2975153	2976541	.	+	0	ID=cds2587;Parent=gene2662;Dbxref=EnsemblGenomes-Gn:YE2741,EnsemblGenomes-Tr:CAL12775,GOA:A1JTT3,InterPro:IPR012408,InterPro:IPR015590,InterPro:IPR016161,InterPro:IPR016162,InterPro:IPR016163,UniProtKB/TrEMBL:A1JTT3,NCBI_GP:CAL12775.1;Name=CAL12775.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: CoA-dependent propionaldehyde dehydrogenase PduP SWALL:Q9XDN1 (EMBL:AE008790) (464 aa) fasta scores: E(): 3.6e-139%2C 79.18 38d in 466 aa%2C and to Listeria innocua hypothetical protein LIN1129 SWALL:Q92CP2 (EMBL:AL596167) (469 aa) fasta scores: E(): 4.9e-103%2C58.93 38d in 470 aa;gbkey=CDS;gene=pduP;inference=similar to sequence:INSDC:AL596167;operon=pdu-cob;product=putative propanediol utilization protein: CoA-dependent propionaldehyde dehydrogenase;protein_id=CAL12775.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2975177	2976475	.	+	.	ID=id4760;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score -135.9%2C E-value 1.2e-09;gbkey=misc_feature;gene=pduP;inference=protein motif:PFAM:PF00171
AM286415.1	EMBL	gene	2976552	2977667	.	+	.	ID=gene2663;Name=pduQ;gbkey=Gene;gene=pduQ;gene_biotype=protein_coding;locus_tag=YE2742
AM286415.1	EMBL	CDS	2976552	2977667	.	+	0	ID=cds2588;Parent=gene2663;Dbxref=EnsemblGenomes-Gn:YE2742,EnsemblGenomes-Tr:CAL12776,GOA:A1JTT4,InterPro:IPR001670,InterPro:IPR018211,UniProtKB/TrEMBL:A1JTT4,NCBI_GP:CAL12776.1;Name=CAL12776.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: propanol dehydrogenase PduQ WALL:Q9XDN0 (EMBL:AE008790) (370 aa) fasta scores: E(): 6.6e-101%2C 70.19 38d in 369 aa%2C and to Listeria innocua hypothetical protein LIN1130 SWALL:Q92CP1 (EMBL:AL596167) (372 aa) fasta scores: E(): 1.3e-64%2C 47.97 38d in 371 aa;gbkey=CDS;gene=pduQ;inference=similar to sequence:INSDC:AL596167;operon=pdu-cob;product=putative propanediol utilization protein: propanol dehydrogenase;protein_id=CAL12776.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2976573	2977637	.	+	.	ID=id4761;Note=Pfam match to entry PF00465 Fe-ADH%2C Iron-containing alcohol dehydrogenase%2C score 327.0%2C E-value 1.4e-95;gbkey=misc_feature;gene=pduQ;inference=protein motif:PFAM:PF00465
AM286415.1	EMBL	sequence_feature	2977011	2977097	.	+	.	ID=id4762;Note=PS00913 Iron-containing alcohol dehydrogenases signature 1.;gbkey=misc_feature;gene=pduQ;inference=protein motif:Prosite:PS00913
AM286415.1	EMBL	gene	2977690	2979051	.	+	.	ID=gene2664;Name=pduS;gbkey=Gene;gene=pduS;gene_biotype=protein_coding;locus_tag=YE2743
AM286415.1	EMBL	CDS	2977690	2979051	.	+	0	ID=cds2589;Parent=gene2664;Dbxref=EnsemblGenomes-Gn:YE2743,EnsemblGenomes-Tr:CAL12777,GOA:A1JTT5,InterPro:IPR009051,InterPro:IPR011538,InterPro:IPR017054,InterPro:IPR017896,InterPro:IPR017900,InterPro:IPR019554,InterPro:IPR026902,UniProtKB/TrEMBL:A1JTT5,NCBI_GP:CAL12777.1;Name=CAL12777.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: polyhedral bodies PduS SWALL:Q9XDM9 (EMBL:AE008790) (451 aa) fasta scores: E(): 1.1e-122%2C72.14 38d in 438 aa%2C and to Listeria monocytogenes hypothetical protein LMO1142 SWALL:Q8Y7X7 (EMBL:AL591978) (454 aa) fasta scores: E(): 6e-48%2C 37.05 38d in 448 aa;gbkey=CDS;gene=pduS;inference=similar to sequence:INSDC:AL591978;operon=pdu-cob;product=putative NADH dehydrogenase;protein_id=CAL12777.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2977693	2978343	.	+	.	ID=id4763;Note=Pfam match to entry PF01512 Complex1_51K%2CRespiratory-chain NADH dehydrogenase 51 Kd subunit%2C score 58.5%2C E-value 1.6e-15;gbkey=misc_feature;gene=pduS;inference=protein motif:PFAM:PF01512
AM286415.1	EMBL	sequence_feature	2978464	2978535	.	+	.	ID=id4764;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 9.8%2C E-value 0.0051;gbkey=misc_feature;gene=pduS;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	2978485	2978520	.	+	.	ID=id4765;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=pduS;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	2979077	2979634	.	+	.	ID=gene2665;Name=pduT;gbkey=Gene;gene=pduT;gene_biotype=protein_coding;locus_tag=YE2744
AM286415.1	EMBL	CDS	2979077	2979634	.	+	0	ID=cds2590;Parent=gene2665;Dbxref=EnsemblGenomes-Gn:YE2744,EnsemblGenomes-Tr:CAL12778,InterPro:IPR000249,InterPro:IPR011238,UniProtKB/TrEMBL:A1JTT6,NCBI_GP:CAL12778.1;Name=CAL12778.1;Note=Similar to Salmonella typhimurium propanediol utilization protein: polyhedral bodies PduT SWALL:Q9XDM8 (EMBL:AE008790) (184 aa) fasta scores: E(): 4.1e-55%2C73.22 38d in 183 aa%2C and to Listeria monocytogenes hypothetical protein LMO1143 SWALL:Q8Y7X6 (EMBL:AL591978) (184 aa) fasta scores: E(): 1.9e-23%2C 41.01 38d in 178 aa;gbkey=CDS;gene=pduT;inference=similar to sequence:INSDC:AL591978;operon=pdu-cob;product=putative propanediol utilization protein: polyhedral bodies;protein_id=CAL12778.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2979356	2979448	.	+	.	ID=id4766;Note=Pfam match to entry PF00936 Bact_microcomp%2CBacterial microcompartments protein family%2C score 26.3%2CE-value 1.7e-06;gbkey=misc_feature;gene=pduT;inference=protein motif:PFAM:PF00936
AM286415.1	EMBL	gene	2979634	2979984	.	+	.	ID=gene2666;Name=pduU;gbkey=Gene;gene=pduU;gene_biotype=protein_coding;locus_tag=YE2745
AM286415.1	EMBL	CDS	2979634	2979984	.	+	0	ID=cds2591;Parent=gene2666;Dbxref=EnsemblGenomes-Gn:YE2745,EnsemblGenomes-Tr:CAL12779,GOA:A1JTT7,InterPro:IPR000249,InterPro:IPR009307,UniProtKB/TrEMBL:A1JTT7,NCBI_GP:CAL12779.1;Name=CAL12779.1;Note=Similar to Salmonella typhimurium and Salmonella typhi propanediol utilization protein PduU or STY2260 SWALL:PDUU_SALTY (SWALL:Q9XDM7) (116 aa) fasta scores: E(): 5.6e-32%2C 80.17 38d in 116 aa%2C and to Listeria innocua hypothetical protein Lin1108 lin1108 SWALL:Q92CR3 (EMBL:AL596167) (116 aa) fasta scores: E(): 1.3e-26%2C 68.1 id in 116 aa;gbkey=CDS;gene=pduU;inference=similar to sequence:UniProtKB:Q9XDM7;operon=pdu-cob;product=putative propanediol utilization protein;protein_id=CAL12779.1;transl_table=11
AM286415.1	EMBL	gene	2979989	2980423	.	+	.	ID=gene2667;Name=pduV;gbkey=Gene;gene=pduV;gene_biotype=protein_coding;locus_tag=YE2746
AM286415.1	EMBL	CDS	2979989	2980423	.	+	0	ID=cds2592;Parent=gene2667;Dbxref=EnsemblGenomes-Gn:YE2746,EnsemblGenomes-Tr:CAL12780,GOA:A1JTT8,InterPro:IPR012381,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTT8,NCBI_GP:CAL12780.1;Name=CAL12780.1;Note=Similar to Salmonella typhimurium propanediol utilization protein PduV SWALL:PDUV_SALTY (SWALL:Q9XDM6) (150 aa) fasta scores: E(): 5.4e-28%2C 61.97 38d in 142 aa%2Cand to Listeria monocytogenes hypothetical protein LMO1145 SWALL:Q8Y7X4 (EMBL:AL591978) (143 aa) fasta scores: E(): 3.7e-16%2C 39.71 38d in 141 aa;gbkey=CDS;gene=pduV;inference=similar to sequence:UniProtKB:Q9XDM6;operon=pdu-cob;product=conserved hypothetical protein;protein_id=CAL12780.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2980010	2980033	.	+	.	ID=id4767;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=pduV;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2980142	2980174	.	+	.	ID=id4768;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pduV;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2980451	2981689	.	+	.	ID=gene2668;Name=pduW;gbkey=Gene;gene=pduW;gene_biotype=protein_coding;locus_tag=YE2747
AM286415.1	EMBL	CDS	2980451	2981689	.	+	0	ID=cds2593;Parent=gene2668;Dbxref=EnsemblGenomes-Gn:YE2747,EnsemblGenomes-Tr:CAL12781,GOA:A1JTT9,InterPro:IPR000890,InterPro:IPR004372,InterPro:IPR023865,InterPro:IPR024896,NCBI_GP:CAL12781.1;Name=CAL12781.1;Note=Similar to Salmonella typhimurium probable propionate kinase PduW SWALL:PDUW_SALTY (SWALL:P74879) (404 aa) fasta scores: E(): 5.5e-104%2C 66.08 38d in 401 aa%2Cand to Bacillus halodurans acetate kinase BH3192 SWALL:ACKA_BACHD (SWALL:Q9K815) (391 aa) fasta scores: E(): 2.9e-82%2C 54.66 38d in 397 aa;gbkey=CDS;gene=pduW;inference=similar to sequence:UniProtKB:Q9K815;operon=pdu-cob;product=putative propionate kinase;protein_id=CAL12781.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2980460	2981632	.	+	.	ID=id4769;Note=Pfam match to entry PF00871 Acetate_kinase%2CAcetokinase family%2C score 624.8%2C E-value 3.1e-185;gbkey=misc_feature;gene=pduW;inference=protein motif:PFAM:PF00871
AM286415.1	EMBL	sequence_feature	2980463	2980498	.	+	.	ID=id4770;Note=PS01075 Acetate and butyrate kinases family signature 1.;gbkey=misc_feature;gene=pduW;inference=protein motif:Prosite:PS01075
AM286415.1	EMBL	sequence_feature	2981078	2981131	.	+	.	ID=id4771;Note=PS01076 Acetate and butyrate kinases family signature 2.;gbkey=misc_feature;gene=pduW;inference=protein motif:Prosite:PS01076
AM286415.1	EMBL	gene	2981698	2982465	.	+	.	ID=gene2669;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=YE2748
AM286415.1	EMBL	CDS	2981698	2982465	.	+	0	ID=cds2594;Parent=gene2669;Dbxref=EnsemblGenomes-Gn:YE2748,EnsemblGenomes-Tr:CAL12782,GOA:A1JTU0,InterPro:IPR000878,InterPro:IPR003043,InterPro:IPR006366,InterPro:IPR014776,InterPro:IPR014777,UniProtKB/TrEMBL:A1JTU0,NCBI_GP:CAL12782.1;Name=CAL12782.1;Note=Similar to Bacillus megaterium uroporphyrin-III C-methyltransferase CobA SWALL:SUMT_BACME (SWALL:P29928) (238 aa) fasta scores: E(): 4.7e-40%2C 49.57 38d in 234 aa. Similar to the N-terminal region of Listeria innocua hypothetical protein LIN1164 SWALL:Q92CK7 (EMBL:AL596167) (493 aa) fasta scores: E(): 1.2e-53%2C 60.4 38d in 245 aa%2Cand to the C-terminal region of Escherichia coli siroheme synthase [includes: uroporphyrin-III C-methyltransferase%3B precorrin-2 oxidase ferrochelatase] CysG SWALL:CYSG_ECOLI (SWALL:P11098) (457 aa) fasta scores: E(): 1.3e-39%2C 50.62 id in 239 aa;gbkey=CDS;gene=cobA;inference=similar to sequence:UniProtKB:P29928;operon=pdu-cob;product=putative uroporphyrin-III C-methyltransferase;protein_id=CAL12782.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2981710	2982345	.	+	.	ID=id4772;Note=Pfam match to entry PF00590 TP_methylase%2CTetrapyrrole (Corrin/Porphyrin) Methylases%2C score 249.4%2CE-value 3.2e-72;gbkey=misc_feature;gene=cobA;inference=protein motif:PFAM:PF00590
AM286415.1	EMBL	sequence_feature	2981722	2981766	.	+	.	ID=id4773;Note=PS00839 Uroporphyrin-III C-methyltransferase signature 1.;gbkey=misc_feature;gene=cobA;inference=protein motif:Prosite:PS00839
AM286415.1	EMBL	sequence_feature	2981947	2982048	.	+	.	ID=id4774;Note=PS00840 Uroporphyrin-III C-methyltransferase signature 2.;gbkey=misc_feature;gene=cobA;inference=protein motif:Prosite:PS00840
AM286415.1	EMBL	gene	2982513	2983586	.	+	.	ID=gene2670;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=YE2749
AM286415.1	EMBL	CDS	2982513	2983586	.	+	0	ID=cds2595;Parent=gene2670;Dbxref=EnsemblGenomes-Gn:YE2749,EnsemblGenomes-Tr:CAL12783,GOA:A1JTU1,InterPro:IPR004838,InterPro:IPR004839,InterPro:IPR005860,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JTU1,NCBI_GP:CAL12783.1;Name=CAL12783.1;Note=Similar to Salmonella typhimurium protein with L-threonine-O-3-phosphate decarboxylase activity CobD SWALL:P97084 (EMBL:U90625) (364 aa) fasta scores: E(): 2e-71%2C 53.5 38d in 357 aa%2C and to Salmonella typhi putative aminotransferase STY0695 SWALL:Q8Z8H8 (EMBL:AL627267) (364 aa) fasta scores: E(): 1.4e-72%2C54.06 38d in 357 aa;gbkey=CDS;gene=cobD;inference=similar to sequence:INSDC:U90625;operon=pdu-cob;product=putative L-threonine-O-3-phosphate decarboxylase;protein_id=CAL12783.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2982699	2983574	.	+	.	ID=id4775;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 32.2%2C E-value 1.9e-08;gbkey=misc_feature;gene=cobD;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	2983140	2983181	.	+	.	ID=id4776;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=cobD;inference=protein motif:Prosite:PS00105
AM286415.1	EMBL	sequence_feature	2983359	2983391	.	+	.	ID=id4777;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cobD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2983579	2984439	.	+	.	ID=gene2671;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=YE2750
AM286415.1	EMBL	CDS	2983579	2984439	.	+	0	ID=cds2596;Parent=gene2671;Dbxref=EnsemblGenomes-Gn:YE2750,EnsemblGenomes-Tr:CAL12784,GOA:A1JTU2,InterPro:IPR006204,InterPro:IPR014721,InterPro:IPR020568,UniProtKB/TrEMBL:A1JTU2,NCBI_GP:CAL12784.1;Name=CAL12784.1;Note=Similar to Salmonella typhimurium propanediol utilization protein PduX SWALL:Q9XDM4 (EMBL:AE008790) (300 aa) fasta scores: E(): 7.1e-66%2C 59.44 38d in 286 aa. Weakly similar to Bacillus subtilis homoserine kinase ThrB SWALL:KHSE_BACSU (SWALL:P04948) (309 aa) fasta scores: E(): 2.1%2C 24.13 38d in 232 aa;gbkey=CDS;gene=pduX;inference=similar to sequence:UniProtKB:P04948;operon=pdu-cob;product=putative GHMP kinase;protein_id=CAL12784.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2983654	2983938	.	+	.	ID=id4778;Note=Pfam match to entry PF00288 GHMP_kinases%2C GHMP kinases putative ATP-binding protein%2C score 33.1%2C E-value 1.9e-09;gbkey=misc_feature;gene=pduX;inference=protein motif:PFAM:PF00288
AM286415.1	EMBL	gene	2944349	2945407	.	-	.	ID=gene2672;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=YE2707
AM286415.1	EMBL	CDS	2944349	2945407	.	-	0	ID=cds2597;Parent=gene2672;Dbxref=EnsemblGenomes-Gn:YE2707,EnsemblGenomes-Tr:CAL12740,GOA:A1JTP8,InterPro:IPR003200,InterPro:IPR017846,InterPro:IPR023195,NCBI_GP:CAL12740.1;Name=CAL12740.1;Note=Similar to Escherichia coli nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT SWALL:COBT_ECOLI (SWALL:P36562) (359 aa) fasta scores: E(): 2e-82%2C 66.38 id in 351 aa%2C and to Salmonella typhimurium nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase STM2016 SWALL:COBT_SALTY (SWALL:Q05603) (356 aa) fasta scores: E(): 1.6e-84%2C 68.07 id in 354 aa;gbkey=CDS;gene=cobT;inference=similar to sequence:UniProtKB:Q05603;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=CAL12740.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2944373	2945365	.	-	.	ID=id4779;Note=Pfam match to entry PF02277 DBI_PRT%2CPhosphoribosyltransferase%2C score 557.5%2C E-value 5.7e-165;gbkey=misc_feature;gene=cobT;inference=protein motif:PFAM:PF02277
AM286415.1	EMBL	sequence_feature	2944586	2944618	.	-	.	ID=id4780;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cobT;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2945123	2945170	.	-	.	ID=id4781;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature.;gbkey=misc_feature;gene=cobT;inference=protein motif:Prosite:PS00038
AM286415.1	EMBL	pseudogene	2945430	2946062	.	-	.	ID=gene2673;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=pseudogene;locus_tag=YE2708;pseudo=true
AM286415.1	EMBL	CDS	2945430	2946062	.	-	0	ID=cds2598;Parent=gene2673;Dbxref=PSEUDO:CAL12741.1;Note=Similar to Escherichia coli alpha-ribazole-5'-phosphate phosphatase CobC or PhpB SWALL:COBC_ECOLI (SWALL:P52086) (203 aa) fasta scores: E(): 4.9e-22%2C 48.07 38d in 208 aa%2C and to Salmonella typhimurium alpha-ribazole-5'-phosphate phosphatase STM0643 SWALL:COBC_SALTY (SWALL:P39701) (202 aa) fasta scores: E(): 1.1e-21%2C 49.04 38d in 210 aa;gbkey=CDS;gene=cobC;inference=similar to sequence:UniProtKB:P52086;operon=pdu-cob;product=alpha-ribazole-5'-phosphate phosphatase;pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2945457	2946062	.	-	.	ID=id4782;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 160.6%2C E-value 1.7e-45;gbkey=misc_feature;gene=cobC;inference=protein motif:PFAM:PF00300
AM286415.1	EMBL	sequence_feature	2946021	2946050	.	-	.	ID=id4783;Note=PS00175 Phosphoglycerate mutase family phosphohistidine signature.;gbkey=misc_feature;gene=cobC;inference=protein motif:Prosite:PS00175
AM286415.1	EMBL	gene	2946100	2946846	.	-	.	ID=gene2674;Name=cobS;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=YE2709
AM286415.1	EMBL	CDS	2946100	2946846	.	-	0	ID=cds2599;Parent=gene2674;Dbxref=EnsemblGenomes-Gn:YE2709,EnsemblGenomes-Tr:CAL12742,GOA:A1JTQ0,InterPro:IPR003805,UniProtKB/TrEMBL:A1JTQ0,NCBI_GP:CAL12742.1;Name=CAL12742.1;Note=Similar to Escherichia coli cobalamin [5'-phosphate] synthase CobS SWALL:COBS_ECOLI (SWALL:P36561) (247 aa) fasta scores: E(): 1e-56%2C 62.19 id in 246 aa%2C and to Salmonella typhi cobalamin (5'-phosphate) synthase STY2220 SWALL:Q8Z5N8 (EMBL:AL627273) (247 aa) fasta scores: E(): 1.6e-60%2C66.12 38d in 248 aa;gbkey=CDS;gene=cobS;inference=similar to sequence:UniProtKB:P36561;operon=pdu-cob;product=cobalamin [5'-phosphate] synthase;protein_id=CAL12742.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2946106	2946831	.	-	.	ID=id4784;Note=Pfam match to entry PF02654 CobS%2CCobalamin-5-phosphate synthase%2C score 221.6%2C E-value 7.5e-64;gbkey=misc_feature;gene=cobS;inference=protein motif:PFAM:PF02654
AM286415.1	EMBL	sequence_feature	2946679	2946747	.	-	.	ID=id4785;Note=6 probable transmembrane helices predicted for YE2709 by TMHMM2.0 at aa 34-56%2C 60-82%2C 110-132%2C 137-159%2C171-193 and 198-220;gbkey=misc_feature;gene=cobS;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2946601	2946669	.	-	.	ID=id4785;Note=6 probable transmembrane helices predicted for YE2709 by TMHMM2.0 at aa 34-56%2C 60-82%2C 110-132%2C 137-159%2C171-193 and 198-220;gbkey=misc_feature;gene=cobS;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2946451	2946519	.	-	.	ID=id4785;Note=6 probable transmembrane helices predicted for YE2709 by TMHMM2.0 at aa 34-56%2C 60-82%2C 110-132%2C 137-159%2C171-193 and 198-220;gbkey=misc_feature;gene=cobS;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2946370	2946438	.	-	.	ID=id4785;Note=6 probable transmembrane helices predicted for YE2709 by TMHMM2.0 at aa 34-56%2C 60-82%2C 110-132%2C 137-159%2C171-193 and 198-220;gbkey=misc_feature;gene=cobS;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2946268	2946336	.	-	.	ID=id4785;Note=6 probable transmembrane helices predicted for YE2709 by TMHMM2.0 at aa 34-56%2C 60-82%2C 110-132%2C 137-159%2C171-193 and 198-220;gbkey=misc_feature;gene=cobS;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2946187	2946255	.	-	.	ID=id4785;Note=6 probable transmembrane helices predicted for YE2709 by TMHMM2.0 at aa 34-56%2C 60-82%2C 110-132%2C 137-159%2C171-193 and 198-220;gbkey=misc_feature;gene=cobS;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	2946843	2947388	.	-	.	ID=gene2675;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=YE2710
AM286415.1	EMBL	CDS	2946843	2947388	.	-	0	ID=cds2600;Parent=gene2675;Dbxref=EnsemblGenomes-Gn:YE2710,EnsemblGenomes-Tr:CAL12743,GOA:A1JTQ1,InterPro:IPR003203,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTQ1,NCBI_GP:CAL12743.1;Name=CAL12743.1;Note=Similar to Escherichia coli bifunctional cobalamin biosynthesis protein [includes: cobinamide kinase%3B cobinamide phosphate guanylyltransferase] CobU SWALL:COBU_ECOLI (SWALL:P46886) (181 aa) fasta scores: E(): 2.5e-39%2C 59.66 38d in 181 aa%2C and to Salmonella typhi cobinamide kinase and guanylyltransferase STY2221 SWALL:Q8Z5N7 (EMBL:AL627273) (181 aa) fasta scores: E(): 3.1e-41%2C 63.53 38d in 181 aa;gbkey=CDS;gene=cobU;inference=similar to sequence:UniProtKB:P46886;operon=pdu-cob;product=cobinamide kinase and guanylyltransferase;protein_id=CAL12743.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2946849	2947385	.	-	.	ID=id4786;Note=Pfam match to entry PF02283 CobU%2C Cobinamide kinase / cobinamide phosphate guanyltransferase%2C score 269.3%2CE-value 3.2e-78;gbkey=misc_feature;gene=cobU;inference=protein motif:PFAM:PF02283
AM286415.1	EMBL	sequence_feature	2947350	2947373	.	-	.	ID=id4787;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=cobU;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2947385	2948923	.	-	.	ID=gene2676;Name=cbiP;gbkey=Gene;gene=cbiP;gene_biotype=protein_coding;locus_tag=YE2711
AM286415.1	EMBL	CDS	2947385	2948923	.	-	0	ID=cds2601;Parent=gene2676;Dbxref=EnsemblGenomes-Gn:YE2711,EnsemblGenomes-Tr:CAL12744,GOA:A1JTQ2,InterPro:IPR002586,InterPro:IPR004459,InterPro:IPR011698,InterPro:IPR017929,InterPro:IPR027417,InterPro:IPR029062,NCBI_GP:CAL12744.1;Name=CAL12744.1;Note=Similar to Salmonella typhimurium cobyric acid synthase CbiP SWALL:CBIP_SALTY (SWALL:Q05597) (506 aa) fasta scores: E(): 1.9e-130%2C 68.3 38d in 508 aa%2C and to Salmonella typhi putative cobyric acid synthase STY2222 SWALL:Q8Z5N6 (EMBL:AL627273) (506 aa) fasta scores: E(): 4.1e-131%2C 68.7 38d in 508 aa;gbkey=CDS;gene=cbiP;inference=similar to sequence:UniProtKB:Q05597;operon=pdu-cob;product=cobyric acid synthase;protein_id=CAL12744.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2948222	2948914	.	-	.	ID=id4788;Note=Pfam match to entry PF01656 CbiA%2C Cobyrinic acid a%2Cc-diamide synthase%2C score 328.7%2C E-value 4.2e-96;gbkey=misc_feature;gene=cbiP;inference=protein motif:PFAM:PF01656
AM286415.1	EMBL	gene	2948935	2949750	.	-	.	ID=gene2677;Name=cbiO;gbkey=Gene;gene=cbiO;gene_biotype=protein_coding;locus_tag=YE2712
AM286415.1	EMBL	CDS	2948935	2949750	.	-	0	ID=cds2602;Parent=gene2677;Dbxref=EnsemblGenomes-Gn:YE2712,EnsemblGenomes-Tr:CAL12745,GOA:A1JTQ3,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005876,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTQ3,NCBI_GP:CAL12745.1;Name=CAL12745.1;Note=Similar to Salmonella typhimurium cobalt transport ATP-binding protein CbiO SWALL:CBIO_SALTY (SWALL:Q05596) (271 aa) fasta scores: E(): 8.7e-63%2C 67.77 38d in 270 aa%2Cand to Salmonella typhi putative cobalt transport ATP-binding protein STY2223 SWALL:Q8Z5N5 (EMBL:AL627273) (271 aa) fasta scores: E(): 3.4e-63%2C 68.14 38d in 270 aa;gbkey=CDS;gene=cbiO;inference=similar to sequence:UniProtKB:Q05596;operon=pdu-cob;product=putative cobalt transport ATP-binding protein;protein_id=CAL12745.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2949115	2949672	.	-	.	ID=id4789;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 203.8%2C E-value 1.7e-58;gbkey=misc_feature;gene=cbiO;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2949298	2949342	.	-	.	ID=id4790;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=cbiO;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	2949628	2949651	.	-	.	ID=id4791;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=cbiO;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	2949762	2950439	.	-	.	ID=gene2678;Name=cbiQ;gbkey=Gene;gene=cbiQ;gene_biotype=protein_coding;locus_tag=YE2713
AM286415.1	EMBL	CDS	2949762	2950439	.	-	0	ID=cds2603;Parent=gene2678;Dbxref=EnsemblGenomes-Gn:YE2713,EnsemblGenomes-Tr:CAL12746,GOA:A1JTQ4,InterPro:IPR003339,InterPro:IPR012809,UniProtKB/TrEMBL:A1JTQ4,NCBI_GP:CAL12746.1;Name=CAL12746.1;Note=Similar to Salmonella typhimurium cobalt transport protein CbiQ SWALL:CBIQ_SALTY (SWALL:Q05598) (225 aa) fasta scores: E(): 5.5e-56%2C 58.66 38d in 225 aa%2C and to Salmonella typhi putative cobalt transport protein STY2224 SWALL:Q8Z5N4 (EMBL:AL627273) (225 aa) fasta scores: E(): 5.5e-56%2C 58.66 38d in 225 aa;gbkey=CDS;gene=cbiQ;inference=similar to sequence:UniProtKB:Q05598;operon=pdu-cob;product=putative cobalt transport protein;protein_id=CAL12746.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2949765	2950412	.	-	.	ID=id4792;Note=Pfam match to entry PF02361 CbiQ%2C Cobalt transport protein%2C score 150.9%2C E-value 1.4e-42;gbkey=misc_feature;gene=cbiQ;inference=protein motif:PFAM:PF02361
AM286415.1	EMBL	sequence_feature	2950293	2950361	.	-	.	ID=id4793;Note=5 probable transmembrane helices predicted for YE2713 by TMHMM2.0 at aa 29-51%2C 64-86%2C 122-144%2C 157-174 and 184-206;gbkey=misc_feature;gene=cbiQ;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2950188	2950256	.	-	.	ID=id4793;Note=5 probable transmembrane helices predicted for YE2713 by TMHMM2.0 at aa 29-51%2C 64-86%2C 122-144%2C 157-174 and 184-206;gbkey=misc_feature;gene=cbiQ;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2950014	2950082	.	-	.	ID=id4793;Note=5 probable transmembrane helices predicted for YE2713 by TMHMM2.0 at aa 29-51%2C 64-86%2C 122-144%2C 157-174 and 184-206;gbkey=misc_feature;gene=cbiQ;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2949924	2949977	.	-	.	ID=id4793;Note=5 probable transmembrane helices predicted for YE2713 by TMHMM2.0 at aa 29-51%2C 64-86%2C 122-144%2C 157-174 and 184-206;gbkey=misc_feature;gene=cbiQ;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2949828	2949896	.	-	.	ID=id4793;Note=5 probable transmembrane helices predicted for YE2713 by TMHMM2.0 at aa 29-51%2C 64-86%2C 122-144%2C 157-174 and 184-206;gbkey=misc_feature;gene=cbiQ;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	2950426	2950707	.	-	.	ID=gene2679;Name=cbiN;gbkey=Gene;gene=cbiN;gene_biotype=protein_coding;locus_tag=YE2714A
AM286415.1	EMBL	CDS	2950426	2950707	.	-	0	ID=cds2604;Parent=gene2679;Dbxref=EnsemblGenomes-Gn:YE2714A,EnsemblGenomes-Tr:CCP19183,GOA:K8FK41,InterPro:IPR003705,UniProtKB/TrEMBL:K8FK41,NCBI_GP:CCP19183.1;Name=CCP19183.1;gbkey=CDS;gene=cbiN;product=cobalt transport protein cbiN;protein_id=CCP19183.1;transl_table=11
AM286415.1	EMBL	gene	2950709	2951440	.	-	.	ID=gene2680;Name=cbiM;gbkey=Gene;gene=cbiM;gene_biotype=protein_coding;locus_tag=YE2714
AM286415.1	EMBL	CDS	2950709	2951440	.	-	0	ID=cds2605;Parent=gene2680;Dbxref=EnsemblGenomes-Gn:YE2714,EnsemblGenomes-Tr:CAL12747,GOA:A1JTQ5,InterPro:IPR002751,InterPro:IPR018024,UniProtKB/TrEMBL:A1JTQ5,NCBI_GP:CAL12747.1;Name=CAL12747.1;Note=Similar to Salmonella typhimurium cobalamin biosynthetic operon hypothetical protein CbiM SWALL:CBIM_SALTY (SWALL:Q05594) (245 aa) fasta scores: E(): 2.7e-78%2C 81.48 38d in 243 aa%2C and to Listeria monocytogenes hypothetical protein LMO1204 SWALL:Q8Y7R7 (EMBL:AL591978) (244 aa) fasta scores: E(): 3.5e-56%2C63.24 38d in 234 aa;gbkey=CDS;gene=cbiM;inference=similar to sequence:UniProtKB:Q05594;operon=pdu-cob;product=putative membrane protein;protein_id=CAL12747.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2950727	2951290	.	-	.	ID=id4794;Note=Pfam match to entry PF01891 CbiM%2C CbiM%2C score 334.7%2C E-value 6.8e-98;gbkey=misc_feature;gene=cbiM;inference=protein motif:PFAM:PF01891
AM286415.1	EMBL	sequence_feature	2951273	2951341	.	-	.	ID=id4795;Note=6 probable transmembrane helices predicted for YE2714 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 132-154%2C167-189 and 204-226;gbkey=misc_feature;gene=cbiM;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2951162	2951230	.	-	.	ID=id4795;Note=6 probable transmembrane helices predicted for YE2714 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 132-154%2C167-189 and 204-226;gbkey=misc_feature;gene=cbiM;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2951075	2951143	.	-	.	ID=id4795;Note=6 probable transmembrane helices predicted for YE2714 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 132-154%2C167-189 and 204-226;gbkey=misc_feature;gene=cbiM;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2950979	2951047	.	-	.	ID=id4795;Note=6 probable transmembrane helices predicted for YE2714 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 132-154%2C167-189 and 204-226;gbkey=misc_feature;gene=cbiM;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2950874	2950942	.	-	.	ID=id4795;Note=6 probable transmembrane helices predicted for YE2714 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 132-154%2C167-189 and 204-226;gbkey=misc_feature;gene=cbiM;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2950763	2950831	.	-	.	ID=id4795;Note=6 probable transmembrane helices predicted for YE2714 by TMHMM2.0 at aa 34-56%2C 71-93%2C 100-122%2C 132-154%2C167-189 and 204-226;gbkey=misc_feature;gene=cbiM;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	2951617	2952330	.	-	.	ID=gene2681;Name=cbiL;gbkey=Gene;gene=cbiL;gene_biotype=protein_coding;locus_tag=YE2715
AM286415.1	EMBL	CDS	2951617	2952330	.	-	0	ID=cds2606;Parent=gene2681;Dbxref=EnsemblGenomes-Gn:YE2715,EnsemblGenomes-Tr:CAL12748,GOA:A1JTQ6,InterPro:IPR000878,InterPro:IPR003043,InterPro:IPR006364,InterPro:IPR012382,InterPro:IPR014777,UniProtKB/TrEMBL:A1JTQ6,NCBI_GP:CAL12748.1;Name=CAL12748.1;Note=Similar to Salmonella typhimurium precorrin-2 C20-methyltransferase CbiL SWALL:CBIL_SALTY (SWALL:Q05593) (237 aa) fasta scores: E(): 1.2e-68%2C 73.27 38d in 232 aa%2Cand to Salmonella typhi precorrin-2 C20-methyltransferase STY2228 SWALL:Q8Z5N2 (EMBL:AL627273) (237 aa) fasta scores: E(): 6.2e-68%2C 72.84 38d in 232 aa;gbkey=CDS;gene=cbiL;inference=similar to sequence:UniProtKB:Q05593;operon=pdu-cob;product=precorrin-2 C20-methyltransferase;protein_id=CAL12748.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2951683	2952321	.	-	.	ID=id4796;Note=Pfam match to entry PF00590 TP_methylase%2CTetrapyrrole (Corrin/Porphyrin) Methylases%2C score 162.2%2CE-value 5.8e-46;gbkey=misc_feature;gene=cbiL;inference=protein motif:PFAM:PF00590
AM286415.1	EMBL	sequence_feature	2951953	2952051	.	-	.	ID=id4797;Note=PS00840 Uroporphyrin-III C-methyltransferase signature 2.;gbkey=misc_feature;gene=cbiL;inference=protein motif:Prosite:PS00840
AM286415.1	EMBL	gene	2952330	2953124	.	-	.	ID=gene2682;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=YE2716
AM286415.1	EMBL	CDS	2952330	2953124	.	-	0	ID=cds2607;Parent=gene2682;Dbxref=EnsemblGenomes-Gn:YE2716,EnsemblGenomes-Tr:CAL12749,GOA:A1JTQ7,InterPro:IPR010388,UniProtKB/TrEMBL:A1JTQ7,NCBI_GP:CAL12749.1;Name=CAL12749.1;Note=Similar to Salmonella typhimurium cobalt chelatase cbiK SWALL:CBIK_SALTY (SWALL:Q05592) (264 aa) fasta scores: E(): 5.8e-64%2C 66.66 38d in 264 aa%2C and to Listeria monocytogenes CbiK protein SWALL:Q8Y7R9 (EMBL:AL591978) (261 aa) fasta scores: E(): 7.8e-53%2C 54.26 38d in 258 aa;gbkey=CDS;gene=cbiK;inference=similar to sequence:UniProtKB:Q05592;operon=pdu-cob;product=cobalt chelatase;protein_id=CAL12749.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2952483	2952524	.	-	.	ID=id4798;Note=PS00761 Signal peptidases I signature 3.;gbkey=misc_feature;gene=cbiK;inference=protein motif:Prosite:PS00761
AM286415.1	EMBL	sequence_feature	2952654	2952686	.	-	.	ID=id4799;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cbiK;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2953121	2953948	.	-	.	ID=gene2683;Name=cbiJ;gbkey=Gene;gene=cbiJ;gene_biotype=protein_coding;locus_tag=YE2717
AM286415.1	EMBL	CDS	2953121	2953948	.	-	0	ID=cds2608;Parent=gene2683;Dbxref=EnsemblGenomes-Gn:YE2717,EnsemblGenomes-Tr:CAL12750,GOA:A1JTQ8,InterPro:IPR003723,UniProtKB/TrEMBL:A1JTQ8,NCBI_GP:CAL12750.1;Name=CAL12750.1;Note=Similar to Salmonella typhimurium precorrin-6X reductase CbiJ SWALL:CBIJ_SALTY (SWALL:Q05591) (263 aa) fasta scores: E(): 2.6e-48%2C 52.75 38d in 254 aa%2C and to Listeria innocua hypothetical protein LIN1163 SWALL:Q92CK8 (EMBL:AL596167) (250 aa) fasta scores: E(): 2e-29%2C 42.1 id in 228 aa;gbkey=CDS;gene=cbiJ;inference=similar to sequence:UniProtKB:Q05591;operon=pdu-cob;product=precorrin-6X reductase;protein_id=CAL12750.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2953169	2953933	.	-	.	ID=id4800;Note=Pfam match to entry PF02571 CbiJ%2C Precorrin-6x reductase CbiJ/CobK%2C score 134.1%2C E-value 1.7e-37;gbkey=misc_feature;gene=cbiJ;inference=protein motif:PFAM:PF02571
AM286415.1	EMBL	gene	2953945	2954670	.	-	.	ID=gene2684;Name=cbiH;gbkey=Gene;gene=cbiH;gene_biotype=protein_coding;locus_tag=YE2718
AM286415.1	EMBL	CDS	2953945	2954670	.	-	0	ID=cds2609;Parent=gene2684;Dbxref=EnsemblGenomes-Gn:YE2718,EnsemblGenomes-Tr:CAL12751,GOA:A1JTQ9,InterPro:IPR000878,InterPro:IPR006363,InterPro:IPR014776,InterPro:IPR014777,UniProtKB/TrEMBL:A1JTQ9,NCBI_GP:CAL12751.1;Name=CAL12751.1;Note=Similar to Salmonella typhimurium precorrin-3B C17-methyltransferase CbiH SWALL:CBIH_SALTY (SWALL:Q05590) (241 aa) fasta scores: E(): 2.1e-78%2C 80.49 38d in 241 aa%2Cand to Salmonella typhi precorrin-3 C17-methyltransferase STY2232 SWALL:Q8Z5N1 (EMBL:AL627273) (241 aa) fasta scores: E(): 1.3e-78%2C 80.91 38d in 241 aa;gbkey=CDS;gene=cbiH;inference=similar to sequence:UniProtKB:Q05590;operon=pdu-cob;product=precorrin-3 C17-methyltransferase;protein_id=CAL12751.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2954044	2954670	.	-	.	ID=id4801;Note=Pfam match to entry PF00590 TP_methylase%2CTetrapyrrole (Corrin/Porphyrin) Methylases%2C score 211.0%2CE-value 1.2e-60;gbkey=misc_feature;gene=cbiH;inference=protein motif:PFAM:PF00590
AM286415.1	EMBL	pseudogene	2954670	2955725	.	-	.	ID=gene2685;Name=cbiG;gbkey=Gene;gene=cbiG;gene_biotype=pseudogene;locus_tag=YE2719;pseudo=true
AM286415.1	EMBL	CDS	2954670	2955725	.	-	0	ID=cds2610;Parent=gene2685;Dbxref=PSEUDO:CAL12752.1;Note=Similar to Salmonella typhimurium protein cobalamin biosynthetic operon hypothetical protein CbiG SWALL:CBIG_SALTY (SWALL:Q05631) (351 aa) fasta scores: E(): 4.2e-97%2C 68.09 38d in 351 aa%2C and to Salmonella typhi CbiG protein STY2233 SWALL:Q8Z5N0 (EMBL:AL627273) (351 aa) fasta scores: E(): 1.9e-96%2C 68.09 38d in 351 aa;gbkey=CDS;gene=cbiG;inference=similar to sequence:UniProtKB:Q05631;operon=pdu-cob;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	2954679	2955509	.	-	.	ID=id4802;Note=Pfam match to entry PF01890 CbiG%2C CbiG%2C score 373.0%2C E-value 1.9e-109;gbkey=misc_feature;gene=cbiG;inference=protein motif:PFAM:PF01890
AM286415.1	EMBL	gene	2955706	2956497	.	-	.	ID=gene2686;Name=cbiF;gbkey=Gene;gene=cbiF;gene_biotype=protein_coding;locus_tag=YE2719a
AM286415.1	EMBL	CDS	2955706	2956497	.	-	0	ID=cds2611;Parent=gene2686;Dbxref=EnsemblGenomes-Gn:YE2719a,EnsemblGenomes-Tr:CAL12753,GOA:A1JTR1,InterPro:IPR000878,InterPro:IPR003043,InterPro:IPR006362,InterPro:IPR014776,InterPro:IPR014777,UniProtKB/TrEMBL:A1JTR1,NCBI_GP:CAL12753.1;Name=CAL12753.1;Note=Similar to Salmonella typhimurium%2C and Salmonella typhi precorrin-4 C11-methyltransferase CbiF or STY2234 SWALL:CBIF_SALTY (SWALL:Q05630) (257 aa) fasta scores: E(): 1.1e-73%2C 78.73 38d in 254 aa%2C and to Listeria monocytogenes CbiF protein LMO1197 SWALL:Q8Y7S4 (EMBL:AL591978) (249 aa) fasta scores: E(): 5.2e-59%2C66.39 38d in 247 aa;gbkey=CDS;gene=cbiF;inference=similar to sequence:UniProtKB:Q05630;operon=pdu-cob;product=precorrin-4 C11-methyltransferase;protein_id=CAL12753.1;transl_table=11
AM286415.1	EMBL	gene	2956490	2957059	.	-	.	ID=gene2687;Name=cbiT;gbkey=Gene;gene=cbiT;gene_biotype=protein_coding;locus_tag=YE2720
AM286415.1	EMBL	CDS	2956490	2957059	.	-	0	ID=cds2612;Parent=gene2687;Dbxref=EnsemblGenomes-Gn:YE2720,EnsemblGenomes-Tr:CAL12754,GOA:A1JTR2,InterPro:IPR014008,InterPro:IPR029063,UniProtKB/TrEMBL:A1JTR2,NCBI_GP:CAL12754.1;Name=CAL12754.1;Note=Similar to Salmonella typhimurium precorrin-8W decarboxylase CbiT SWALL:CBIT_SALTY (SWALL:Q05632) (192 aa) fasta scores: E(): 1.1e-49%2C 66.66 38d in 189 aa%2C and to Salmonella typhi precorrin-8W decarboxylase STY2235 SWALL:Q8Z5M9 (EMBL:AL627273) (192 aa) fasta scores: E(): 1.4e-49%2C 66.66 38d in 189 aa;gbkey=CDS;gene=cbiT;inference=similar to sequence:UniProtKB:Q05632;operon=pdu-cob;product=precorrin-8W decarboxylase;protein_id=CAL12754.1;transl_table=11
AM286415.1	EMBL	gene	2957049	2957651	.	-	.	ID=gene2688;Name=cbiE;gbkey=Gene;gene=cbiE;gene_biotype=protein_coding;locus_tag=YE2721
AM286415.1	EMBL	CDS	2957049	2957651	.	-	0	ID=cds2613;Parent=gene2688;Dbxref=EnsemblGenomes-Gn:YE2721,EnsemblGenomes-Tr:CAL12755,GOA:A1JTR3,InterPro:IPR000878,InterPro:IPR012818,InterPro:IPR014776,InterPro:IPR014777,UniProtKB/TrEMBL:A1JTR3,NCBI_GP:CAL12755.1;Name=CAL12755.1;Note=Similar to Salmonella typhimurium%2C and Salmonella typhi precorrin-6Y C5%2C15-methyltransferase [decarboxylating] CbiE or STY2236 SWALL:CBIE_SALTY (SWALL:Q05629) (201 aa) fasta scores: E(): 3.3e-39%2C 55.22 id in 201 aa%2C and to Listeria innocua cbie protein cbie or lin1158 SWALL:Q92CL3 (EMBL:AL596167) (198 aa) fasta scores: E(): 1.6e-35%2C 51 38d in 200 aa;gbkey=CDS;gene=cbiE;inference=similar to sequence:UniProtKB:Q05629;product=precorrin-6Y C5%2C15-methyltransferase [decarboxylating];protein_id=CAL12755.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2957094	2957651	.	-	.	ID=id4803;Note=Pfam match to entry PF00590 TP_methylase%2CTetrapyrrole (Corrin/Porphyrin) Methylases%2C score 126.5%2CE-value 3.2e-35;gbkey=misc_feature;gene=cbiE;inference=protein motif:PFAM:PF00590
AM286415.1	EMBL	gene	2957648	2958814	.	-	.	ID=gene2689;Name=cbiD;gbkey=Gene;gene=cbiD;gene_biotype=protein_coding;locus_tag=YE2722
AM286415.1	EMBL	CDS	2957648	2958814	.	-	0	ID=cds2614;Parent=gene2689;Dbxref=EnsemblGenomes-Gn:YE2722,EnsemblGenomes-Tr:CAL12756,GOA:A1JTR4,InterPro:IPR002748,UniProtKB/TrEMBL:A1JTR4,NCBI_GP:CAL12756.1;Name=CAL12756.1;Note=Similar to Salmonella typhimurium cobalamin biosynthetic operon hypothetical protein CbiD SWALL:CBID_SALTY (SWALL:Q05628) (379 aa) fasta scores: E(): 1.4e-113%2C 76.69 38d in 369 aa%2C and to Salmonella typhi Cbid protein STY2237 SWALL:Q8Z5M8 (EMBL:AL627273) (379 aa) fasta scores: E(): 2.6e-112%2C 75.88 38d in 369 aa;gbkey=CDS;gene=cbiD;inference=similar to sequence:UniProtKB:Q05628;product=conserved hypothetical protein;protein_id=CAL12756.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2957852	2958718	.	-	.	ID=id4804;Note=Pfam match to entry PF01888 CbiD%2C CbiD%2C score 540.9%2C E-value 5.9e-160;gbkey=misc_feature;gene=cbiD;inference=protein motif:PFAM:PF01888
AM286415.1	EMBL	sequence_feature	2958137	2958166	.	-	.	ID=id4805;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=cbiD;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	2958811	2959458	.	-	.	ID=gene2690;Name=cbiC;gbkey=Gene;gene=cbiC;gene_biotype=protein_coding;locus_tag=YE2723
AM286415.1	EMBL	CDS	2958811	2959458	.	-	0	ID=cds2615;Parent=gene2690;Dbxref=EnsemblGenomes-Gn:YE2723,EnsemblGenomes-Tr:CAL12757,GOA:A1JTR5,InterPro:IPR003722,UniProtKB/TrEMBL:A1JTR5,NCBI_GP:CAL12757.1;Name=CAL12757.1;Note=Similar to Salmonella typhimurium precorrin-8X methylmutase CbiC SWALL:CBIC_SALTY (SWALL:Q05601) (210 aa) fasta scores: E(): 3.2e-53%2C 69.23 38d in 208 aa%2C and to Listeria innocua hypothetical protein LIN1156 SWALL:Q92CL5 (EMBL:AL596167) (210 aa) fasta scores: E(): 2.8e-39%2C53.33 38d in 210 aa;gbkey=CDS;gene=cbiC;inference=similar to sequence:UniProtKB:Q05601;operon=pdu-cob;product=precorrin-8X methylmutase;protein_id=CAL12757.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2958838	2959440	.	-	.	ID=id4806;Note=Pfam match to entry PF02570 CbiC%2C Precorrin-8X methylmutase%2C score 146.4%2C E-value 3.3e-41;gbkey=misc_feature;gene=cbiC;inference=protein motif:PFAM:PF02570
AM286415.1	EMBL	sequence_feature	2959048	2959140	.	-	.	ID=id4807;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=cbiC;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	gene	2959472	2960428	.	-	.	ID=gene2691;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=YE2724
AM286415.1	EMBL	CDS	2959472	2960428	.	-	0	ID=cds2616;Parent=gene2691;Dbxref=EnsemblGenomes-Gn:YE2724,EnsemblGenomes-Tr:CAL12758,GOA:A1JTR6,InterPro:IPR004485,NCBI_GP:CAL12758.1;Name=CAL12758.1;Note=Similar to Salmonella typhimurium cobalamin biosynthetic operon hypothetical protein CbiB SWALL:CBIB_SALTY (SWALL:Q05600) (319 aa) fasta scores: E(): 2.6e-84%2C 65.09 38d in 318 aa%2C and to Salmonella typhi CbiB protein STY2239 SWALL:Q8Z5M7 (EMBL:AL627273) (319 aa) fasta scores: E(): 1.5e-84%2C 65.4 38d in 318 aa;gbkey=CDS;gene=cbiB;inference=similar to sequence:UniProtKB:Q05600;operon=pdu-cob;product=putative membrane protein;protein_id=CAL12758.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2959478	2960422	.	-	.	ID=id4808;Note=Pfam match to entry PF03186 CobD_Cbib%2C CobD/Cbib protein%2C score 473.1%2C E-value 1.5e-139;gbkey=misc_feature;gene=cbiB;inference=protein motif:PFAM:PF03186
AM286415.1	EMBL	sequence_feature	2960204	2960272	.	-	.	ID=id4809;Note=5 probable transmembrane helices predicted for YE2724 by TMHMM2.0 at aa 53-75%2C 82-101%2C 155-177%2C 204-226 and 294-316;gbkey=misc_feature;gene=cbiB;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	2960126	2960185	.	-	.	ID=id4809;Note=5 probable transmembrane helices predicted for YE2724 by TMHMM2.0 at aa 53-75%2C 82-101%2C 155-177%2C 204-226 and 294-316;gbkey=misc_feature;gene=cbiB;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	2959898	2959966	.	-	.	ID=id4809;Note=5 probable transmembrane helices predicted for YE2724 by TMHMM2.0 at aa 53-75%2C 82-101%2C 155-177%2C 204-226 and 294-316;gbkey=misc_feature;gene=cbiB;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	2959751	2959819	.	-	.	ID=id4809;Note=5 probable transmembrane helices predicted for YE2724 by TMHMM2.0 at aa 53-75%2C 82-101%2C 155-177%2C 204-226 and 294-316;gbkey=misc_feature;gene=cbiB;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	2959481	2959549	.	-	.	ID=id4809;Note=5 probable transmembrane helices predicted for YE2724 by TMHMM2.0 at aa 53-75%2C 82-101%2C 155-177%2C 204-226 and 294-316;gbkey=misc_feature;gene=cbiB;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	2960425	2961828	.	-	.	ID=gene2692;Name=cbiA;gbkey=Gene;gene=cbiA;gene_biotype=protein_coding;locus_tag=YE2725
AM286415.1	EMBL	CDS	2960425	2961828	.	-	0	ID=cds2617;Parent=gene2692;Dbxref=EnsemblGenomes-Gn:YE2725,EnsemblGenomes-Tr:CAL12759,GOA:A1JTR7,InterPro:IPR002586,InterPro:IPR004484,InterPro:IPR011698,InterPro:IPR017929,InterPro:IPR027417,InterPro:IPR029062,UniProtKB/TrEMBL:A1JTR7,NCBI_GP:CAL12759.1;Name=CAL12759.1;Note=Similar to Salmonella typhimurium cobyrinic acid A%2CC-diamide synthase CbiA SWALL:CBIA_SALTY (SWALL:P29946) (459 aa) fasta scores: E(): 2e-118%2C 64.5 38d in 462 aa%2Cand to Salmonella typhi cobyrinic acid A%2CC-diamide synthase STY2240 SWALL:Q8Z5M6 (EMBL:AL627273) (474 aa) fasta scores: E(): 7.4e-118%2C 63.75 38d in 469 aa;gbkey=CDS;gene=cbiA;inference=similar to sequence:UniProtKB:P29946;operon=pdu-cob;product=cobyrinic acid A%2CC-diamide synthase;protein_id=CAL12759.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2961070	2961807	.	-	.	ID=id4810;Note=Pfam match to entry PF01656 CbiA%2C Cobyrinic acid a%2Cc-diamide synthase%2C score 243.4%2C E-value 2.1e-70;gbkey=misc_feature;gene=cbiA;inference=protein motif:PFAM:PF01656
AM286415.1	EMBL	sequence_feature	2961775	2961807	.	-	.	ID=id4811;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cbiA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2962484	2963386	.	-	.	ID=gene2693;Name=pocR;gbkey=Gene;gene=pocR;gene_biotype=protein_coding;locus_tag=YE2726
AM286415.1	EMBL	CDS	2962484	2963386	.	-	0	ID=cds2618;Parent=gene2693;Dbxref=EnsemblGenomes-Gn:YE2726,EnsemblGenomes-Tr:CAL12760,GOA:A1JTR8,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR018771,InterPro:IPR020449,UniProtKB/TrEMBL:A1JTR8,NCBI_GP:CAL12760.1;Name=CAL12760.1;Note=Similar to Salmonella typhimurium regulatory protein PocR SWALL:POCR_SALTY (SWALL:Q05587) (303 aa) fasta scores: E(): 3.3e-96%2C 80.2 38d in 298 aa%2C and to Salmonella typhi pdu/cob regulatory protein STY2241 SWALL:Q8Z5M5 (EMBL:AL627273) (304 aa) fasta scores: E(): 1.9e-95%2C 79.93 38d in 299 aa;gbkey=CDS;gene=pocR;inference=similar to sequence:UniProtKB:Q05587;operon=pdu-cob;product=pdu and cob operons regulatory protein;protein_id=CAL12760.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2962514	2962645	.	-	.	ID=id4812;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 52.7%2C E-value 5.3e-13;gbkey=misc_feature;gene=pocR;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	2962529	2962657	.	-	.	ID=id4813;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=pocR;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	2962664	2962801	.	-	.	ID=id4814;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 52.9%2C E-value 4.5e-13;gbkey=misc_feature;gene=pocR;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	2962700	2962765	.	-	.	ID=id4815;Note=Predicted helix-turn-helix motif with score 1460.000%2C SD 4.16 at aa 208-229%2C sequence LRLEEVAAKVYLSPYYFSKLFK;gbkey=misc_feature;gene=pocR
AM286415.1	EMBL	gene	2963678	2964493	.	-	.	ID=gene2694;Name=pduF;gbkey=Gene;gene=pduF;gene_biotype=protein_coding;locus_tag=YE2727
AM286415.1	EMBL	CDS	2963678	2964493	.	-	0	ID=cds2619;Parent=gene2694;Dbxref=EnsemblGenomes-Gn:YE2727,EnsemblGenomes-Tr:CAL12761,GOA:A1JTR9,InterPro:IPR000425,InterPro:IPR022357,InterPro:IPR023271,UniProtKB/TrEMBL:A1JTR9,NCBI_GP:CAL12761.1;Name=CAL12761.1;Note=Similar to Salmonella typhimurium propanediol diffusion facilitator PduF SWALL:PDUF_SALTY (SWALL:P37451) (264 aa) fasta scores: E(): 2e-89%2C 81.81 38d in 264 aa%2Cand to Salmonella typhi propanediol diffusion facilitator STY2242 SWALL:Q8Z5M4 (EMBL:AL627273) (264 aa) fasta scores: E(): 2.7e-89%2C 81.81 38d in 264 aa;gbkey=CDS;gene=pduF;inference=similar to sequence:UniProtKB:P37451;operon=pdu-cob;product=propanediol diffusion facilitator;protein_id=CAL12761.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2964374	2964442	.	-	.	ID=id4816;Note=6 probable transmembrane helices predicted for YE2727 by TMHMM2.0 at aa 9-31%2C 46-68%2C 75-97%2C 132-154%2C167-189 and 222-244;gbkey=misc_feature;gene=pduF;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2964263	2964331	.	-	.	ID=id4816;Note=6 probable transmembrane helices predicted for YE2727 by TMHMM2.0 at aa 9-31%2C 46-68%2C 75-97%2C 132-154%2C167-189 and 222-244;gbkey=misc_feature;gene=pduF;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2964176	2964244	.	-	.	ID=id4816;Note=6 probable transmembrane helices predicted for YE2727 by TMHMM2.0 at aa 9-31%2C 46-68%2C 75-97%2C 132-154%2C167-189 and 222-244;gbkey=misc_feature;gene=pduF;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2964005	2964073	.	-	.	ID=id4816;Note=6 probable transmembrane helices predicted for YE2727 by TMHMM2.0 at aa 9-31%2C 46-68%2C 75-97%2C 132-154%2C167-189 and 222-244;gbkey=misc_feature;gene=pduF;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2963900	2963968	.	-	.	ID=id4816;Note=6 probable transmembrane helices predicted for YE2727 by TMHMM2.0 at aa 9-31%2C 46-68%2C 75-97%2C 132-154%2C167-189 and 222-244;gbkey=misc_feature;gene=pduF;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2963735	2963803	.	-	.	ID=id4816;Note=6 probable transmembrane helices predicted for YE2727 by TMHMM2.0 at aa 9-31%2C 46-68%2C 75-97%2C 132-154%2C167-189 and 222-244;gbkey=misc_feature;gene=pduF;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	2963747	2964466	.	-	.	ID=id4817;Note=Pfam match to entry PF00230 MIP%2C Major intrinsic protein%2C score 384.8%2C E-value 5.6e-113;gbkey=misc_feature;gene=pduF;inference=protein motif:PFAM:PF00230
AM286415.1	EMBL	sequence_feature	2963765	2963797	.	-	.	ID=id4818;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pduF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2964260	2964292	.	-	.	ID=id4819;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pduF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	2964278	2964304	.	-	.	ID=id4820;Note=PS00221 MIP family signature.;gbkey=misc_feature;gene=pduF;inference=protein motif:Prosite:PS00221
AM286415.1	EMBL	sequence_feature	2964416	2964448	.	-	.	ID=id4821;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pduF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2984805	2985788	.	+	.	ID=gene2695;Name=YE2751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2751
AM286415.1	EMBL	CDS	2984805	2985788	.	+	0	ID=cds2620;Parent=gene2695;Dbxref=EnsemblGenomes-Gn:YE2751,EnsemblGenomes-Tr:CAL12785,InterPro:IPR025997,InterPro:IPR028082,UniProtKB/TrEMBL:A1JTU3,NCBI_GP:CAL12785.1;Name=CAL12785.1;gbkey=CDS;product=putative periplasmic binding protein;protein_id=CAL12785.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2984880	2985758	.	+	.	ID=id4822;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score -62.7%2C E-value 0.14;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	2986055	2987470	.	+	.	ID=gene2696;Name=YE2752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2752
AM286415.1	EMBL	CDS	2986055	2987470	.	+	0	ID=cds2621;Parent=gene2696;Dbxref=EnsemblGenomes-Gn:YE2752,EnsemblGenomes-Tr:CAL12786,GOA:A1JTU4,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTU4,NCBI_GP:CAL12786.1;Name=CAL12786.1;gbkey=CDS;product=ABC transporter ATP binding protein;protein_id=CAL12786.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2986076	2986636	.	+	.	ID=id4823;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 165.3%2C E-value 6.9e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2986097	2986120	.	+	.	ID=id4824;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2986169	2986192	.	+	.	ID=id4825;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2986820	2987401	.	+	.	ID=id4826;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 115.7%2C E-value 5.6e-32;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2987174	2987218	.	+	.	ID=id4827;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	2987463	2988485	.	+	.	ID=gene2697;Name=YE2753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2753
AM286415.1	EMBL	CDS	2987463	2988485	.	+	0	ID=cds2622;Parent=gene2697;Dbxref=EnsemblGenomes-Gn:YE2753,EnsemblGenomes-Tr:CAL12787,GOA:A1JTU5,InterPro:IPR001851,UniProtKB/TrEMBL:A1JTU5,NCBI_GP:CAL12787.1;Name=CAL12787.1;gbkey=CDS;product=putative branched-chain amino acid transport system%2C permease component;protein_id=CAL12787.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2987541	2988479	.	+	.	ID=id4828;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score -23.9%2C E-value 1.3e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	sequence_feature	2987547	2987615	.	+	.	ID=id4829;Note=9 probable transmembrane helices predicted for YE2753 by TMHMM2.0 at aa 29-51%2C 64-86%2C 106-128%2C 140-162%2C182-204%2C 225-247%2C 262-284%2C 291-310 and 314-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	2987652	2987720	.	+	.	ID=id4829;Note=9 probable transmembrane helices predicted for YE2753 by TMHMM2.0 at aa 29-51%2C 64-86%2C 106-128%2C 140-162%2C182-204%2C 225-247%2C 262-284%2C 291-310 and 314-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	2987778	2987846	.	+	.	ID=id4829;Note=9 probable transmembrane helices predicted for YE2753 by TMHMM2.0 at aa 29-51%2C 64-86%2C 106-128%2C 140-162%2C182-204%2C 225-247%2C 262-284%2C 291-310 and 314-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	2987880	2987948	.	+	.	ID=id4829;Note=9 probable transmembrane helices predicted for YE2753 by TMHMM2.0 at aa 29-51%2C 64-86%2C 106-128%2C 140-162%2C182-204%2C 225-247%2C 262-284%2C 291-310 and 314-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	2988006	2988074	.	+	.	ID=id4829;Note=9 probable transmembrane helices predicted for YE2753 by TMHMM2.0 at aa 29-51%2C 64-86%2C 106-128%2C 140-162%2C182-204%2C 225-247%2C 262-284%2C 291-310 and 314-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	2988135	2988203	.	+	.	ID=id4829;Note=9 probable transmembrane helices predicted for YE2753 by TMHMM2.0 at aa 29-51%2C 64-86%2C 106-128%2C 140-162%2C182-204%2C 225-247%2C 262-284%2C 291-310 and 314-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	2988246	2988314	.	+	.	ID=id4829;Note=9 probable transmembrane helices predicted for YE2753 by TMHMM2.0 at aa 29-51%2C 64-86%2C 106-128%2C 140-162%2C182-204%2C 225-247%2C 262-284%2C 291-310 and 314-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	2988333	2988392	.	+	.	ID=id4829;Note=9 probable transmembrane helices predicted for YE2753 by TMHMM2.0 at aa 29-51%2C 64-86%2C 106-128%2C 140-162%2C182-204%2C 225-247%2C 262-284%2C 291-310 and 314-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	2988402	2988461	.	+	.	ID=id4829;Note=9 probable transmembrane helices predicted for YE2753 by TMHMM2.0 at aa 29-51%2C 64-86%2C 106-128%2C 140-162%2C182-204%2C 225-247%2C 262-284%2C 291-310 and 314-333;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	2987637	2987669	.	+	.	ID=id4830;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	2988488	2989471	.	+	.	ID=gene2698;Name=YE2754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2754
AM286415.1	EMBL	CDS	2988488	2989471	.	+	0	ID=cds2623;Parent=gene2698;Dbxref=EnsemblGenomes-Gn:YE2754,EnsemblGenomes-Tr:CAL12788,GOA:A1JTU6,InterPro:IPR001851,UniProtKB/TrEMBL:A1JTU6,NCBI_GP:CAL12788.1;Name=CAL12788.1;gbkey=CDS;product=putative ABC transporter%2C permease protein;protein_id=CAL12788.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2988524	2988592	.	+	.	ID=id4831;Note=9 probable transmembrane helices predicted for YE2754 by TMHMM2.0 at aa 13-35%2C 48-70%2C 90-112%2C 119-141%2C161-183%2C 213-232%2C 242-259%2C 264-281 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	2988629	2988697	.	+	.	ID=id4831;Note=9 probable transmembrane helices predicted for YE2754 by TMHMM2.0 at aa 13-35%2C 48-70%2C 90-112%2C 119-141%2C161-183%2C 213-232%2C 242-259%2C 264-281 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	2988755	2988823	.	+	.	ID=id4831;Note=9 probable transmembrane helices predicted for YE2754 by TMHMM2.0 at aa 13-35%2C 48-70%2C 90-112%2C 119-141%2C161-183%2C 213-232%2C 242-259%2C 264-281 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	2988842	2988910	.	+	.	ID=id4831;Note=9 probable transmembrane helices predicted for YE2754 by TMHMM2.0 at aa 13-35%2C 48-70%2C 90-112%2C 119-141%2C161-183%2C 213-232%2C 242-259%2C 264-281 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	2988968	2989036	.	+	.	ID=id4831;Note=9 probable transmembrane helices predicted for YE2754 by TMHMM2.0 at aa 13-35%2C 48-70%2C 90-112%2C 119-141%2C161-183%2C 213-232%2C 242-259%2C 264-281 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	2989124	2989183	.	+	.	ID=id4831;Note=9 probable transmembrane helices predicted for YE2754 by TMHMM2.0 at aa 13-35%2C 48-70%2C 90-112%2C 119-141%2C161-183%2C 213-232%2C 242-259%2C 264-281 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	2989211	2989264	.	+	.	ID=id4831;Note=9 probable transmembrane helices predicted for YE2754 by TMHMM2.0 at aa 13-35%2C 48-70%2C 90-112%2C 119-141%2C161-183%2C 213-232%2C 242-259%2C 264-281 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	2989277	2989330	.	+	.	ID=id4831;Note=9 probable transmembrane helices predicted for YE2754 by TMHMM2.0 at aa 13-35%2C 48-70%2C 90-112%2C 119-141%2C161-183%2C 213-232%2C 242-259%2C 264-281 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	2989346	2989414	.	+	.	ID=id4831;Note=9 probable transmembrane helices predicted for YE2754 by TMHMM2.0 at aa 13-35%2C 48-70%2C 90-112%2C 119-141%2C161-183%2C 213-232%2C 242-259%2C 264-281 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	2988926	2988976	.	+	.	ID=id4832;Note=PS00237 G-protein coupled receptors signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00237
AM286415.1	EMBL	gene	2989561	2989878	.	-	.	ID=gene2699;Name=YE2755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2755
AM286415.1	EMBL	CDS	2989561	2989878	.	-	0	ID=cds2624;Parent=gene2699;Dbxref=EnsemblGenomes-Gn:YE2755,EnsemblGenomes-Tr:CAL12789,InterPro:IPR007458,NCBI_GP:CAL12789.1;Name=CAL12789.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12789.1;transl_table=11
AM286415.1	EMBL	gene	2990042	2991100	.	-	.	ID=gene2700;Name=YE2756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2756
AM286415.1	EMBL	CDS	2990042	2991100	.	-	0	ID=cds2625;Parent=gene2700;Dbxref=EnsemblGenomes-Gn:YE2756,EnsemblGenomes-Tr:CAL12790,UniProtKB/TrEMBL:A1JTU8,NCBI_GP:CAL12790.1;Name=CAL12790.1;Note=Similar to Salmonella typhimurium putative inner membrane protein STM2060 SWALL:Q8ZNR4 (EMBL:AE008791) (352 aa) fasta scores: E(): 3.6e-81%2C 58.8 38d in 352 aa%2C and to Salmonella typhi putative membrane protein STY2265 SWALL:Q8Z5K6 (EMBL:AL627273) (352 aa) fasta scores: E(): 1.5e-80%2C 58.23 38d in 352 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627273;product=putative membrane protein;protein_id=CAL12790.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2990975	2991043	.	-	.	ID=id4833;Note=6 probable transmembrane helices predicted for YE2756 by TMHMM2.0 at aa 20-42%2C 47-66%2C 73-92%2C 96-113%2C118-136 and 140-162;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	2990903	2990962	.	-	.	ID=id4833;Note=6 probable transmembrane helices predicted for YE2756 by TMHMM2.0 at aa 20-42%2C 47-66%2C 73-92%2C 96-113%2C118-136 and 140-162;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	2990825	2990884	.	-	.	ID=id4833;Note=6 probable transmembrane helices predicted for YE2756 by TMHMM2.0 at aa 20-42%2C 47-66%2C 73-92%2C 96-113%2C118-136 and 140-162;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	2990762	2990815	.	-	.	ID=id4833;Note=6 probable transmembrane helices predicted for YE2756 by TMHMM2.0 at aa 20-42%2C 47-66%2C 73-92%2C 96-113%2C118-136 and 140-162;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	2990693	2990749	.	-	.	ID=id4833;Note=6 probable transmembrane helices predicted for YE2756 by TMHMM2.0 at aa 20-42%2C 47-66%2C 73-92%2C 96-113%2C118-136 and 140-162;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	2990615	2990683	.	-	.	ID=id4833;Note=6 probable transmembrane helices predicted for YE2756 by TMHMM2.0 at aa 20-42%2C 47-66%2C 73-92%2C 96-113%2C118-136 and 140-162;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	2991396	2992505	.	-	.	ID=gene2701;Name=YE2757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2757
AM286415.1	EMBL	CDS	2991396	2992505	.	-	0	ID=cds2626;Parent=gene2701;Dbxref=EnsemblGenomes-Gn:YE2757,EnsemblGenomes-Tr:CAL12791,InterPro:IPR013120,InterPro:IPR016040,UniProtKB/TrEMBL:A1JTU9,NCBI_GP:CAL12791.1;Name=CAL12791.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12791.1;transl_table=11
AM286415.1	EMBL	gene	2992871	2994301	.	+	.	ID=gene2702;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;gene_synonym=cpeA,xonA;locus_tag=YE2758
AM286415.1	EMBL	CDS	2992871	2994301	.	+	0	ID=cds2627;Parent=gene2702;Dbxref=EnsemblGenomes-Gn:YE2758,EnsemblGenomes-Tr:CAL12792,GOA:A1JTV0,InterPro:IPR012337,InterPro:IPR013520,InterPro:IPR013620,InterPro:IPR023607,UniProtKB/TrEMBL:A1JTV0,NCBI_GP:CAL12792.1;Name=CAL12792.1;gbkey=CDS;gene=sbcB;product=exodeoxyribonuclease I;protein_id=CAL12792.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2992898	2993461	.	+	.	ID=id4834;Note=Pfam match to entry PF00929 Exonuclease%2CExonuclease%2C score 98.4%2C E-value 9.4e-27;gbkey=misc_feature;gene=sbcB;inference=protein motif:PFAM:PF00929
AM286415.1	EMBL	gene	2994485	2995873	.	-	.	ID=gene2703;Name=yeeF;gbkey=Gene;gene=yeeF;gene_biotype=protein_coding;locus_tag=YE2759
AM286415.1	EMBL	CDS	2994485	2995873	.	-	0	ID=cds2628;Parent=gene2703;Dbxref=EnsemblGenomes-Gn:YE2759,EnsemblGenomes-Tr:CAL12793,GOA:A1JTV1,InterPro:IPR002293,UniProtKB/TrEMBL:A1JTV1,NCBI_GP:CAL12793.1;Name=CAL12793.1;gbkey=CDS;gene=yeeF;product=Amino acid permease;protein_id=CAL12793.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2994536	2995810	.	-	.	ID=id4835;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -128.9%2C E-value 3.5e-07;gbkey=misc_feature;gene=yeeF;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	2995742	2995798	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	2995631	2995699	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	2995502	2995570	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	2995391	2995459	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	2995310	2995378	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	2995199	2995252	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	2995070	2995138	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	2994926	2994994	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	2994782	2994841	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	2994701	2994769	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	2994608	2994667	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	2994542	2994595	.	-	.	ID=id4836;Note=12 probable transmembrane helices predicted for YE2759 by TMHMM2.0 at aa 26-44%2C 59-81%2C 102-124%2C 139-161%2C166-188%2C 208-225%2C 246-268%2C 294-316%2C 345-364%2C 369-391%2C403-422 and 427-444;gbkey=misc_feature;gene=yeeF;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	2995863	2996078	.	-	.	ID=gene2704;Name=YE2760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2760
AM286415.1	EMBL	CDS	2995863	2996078	.	-	0	ID=cds2629;Parent=gene2704;Dbxref=EnsemblGenomes-Gn:YE2760,EnsemblGenomes-Tr:CAL12794,UniProtKB/TrEMBL:A1JTV2,NCBI_GP:CAL12794.1;Name=CAL12794.1;Note=No significant database matches. Doubtful CDS;gbkey=CDS;product=hypothetical protein;protein_id=CAL12794.1;transl_table=11
AM286415.1	EMBL	gene	2996327	2997418	.	-	.	ID=gene2705;Name=YE2761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2761
AM286415.1	EMBL	CDS	2996327	2997418	.	-	0	ID=cds2630;Parent=gene2705;Dbxref=EnsemblGenomes-Gn:YE2761,EnsemblGenomes-Tr:CAL12795,GOA:A1JTV3,InterPro:IPR001670,InterPro:IPR016205,InterPro:IPR018211,UniProtKB/TrEMBL:A1JTV3,NCBI_GP:CAL12795.1;Name=CAL12795.1;gbkey=CDS;product=putative dehydrogenase;protein_id=CAL12795.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2996369	2997385	.	-	.	ID=id4837;Note=Pfam match to entry PF00465 Fe-ADH%2C Iron-containing alcohol dehydrogenase%2C score -28.2%2C E-value 4.5e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00465
AM286415.1	EMBL	sequence_feature	2996879	2996965	.	-	.	ID=id4838;Note=PS00913 Iron-containing alcohol dehydrogenases signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00913
AM286415.1	EMBL	gene	2997638	2999149	.	+	.	ID=gene2706;Name=YE2762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2762
AM286415.1	EMBL	CDS	2997638	2999149	.	+	0	ID=cds2631;Parent=gene2706;Dbxref=EnsemblGenomes-Gn:YE2762,EnsemblGenomes-Tr:CAL12796,GOA:A1JTV4,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTV4,NCBI_GP:CAL12796.1;Name=CAL12796.1;Note=Similar to Bacillus subtilis ribose transport ATP-binding protein RbsA SWALL:RBSA_BACSU (SWALL:P36947) (493 aa) fasta scores: E(): 4e-57%2C 36.08 38d in 496 aa%2Cand to Yersinia pestis sugar transport ATP-binding protein YPO3964 SWALL:Q8ZA54 (EMBL:AJ414160) (507 aa) fasta scores: E(): 2.2e-57%2C 37.52 38d in 493 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P36947;product=putative ABC transport system ATP-binding protein;protein_id=CAL12796.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2997788	2998303	.	+	.	ID=id4839;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 79.9%2C E-value 3.3e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2998490	2999068	.	+	.	ID=id4840;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 78.9%2C E-value 7e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	2998511	2998534	.	+	.	ID=id4841;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	2998841	2998885	.	+	.	ID=id4842;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	2999146	3000144	.	+	.	ID=gene2707;Name=YE2763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2763
AM286415.1	EMBL	CDS	2999146	3000144	.	+	0	ID=cds2632;Parent=gene2707;Dbxref=EnsemblGenomes-Gn:YE2763,EnsemblGenomes-Tr:CAL12797,GOA:A1JTV5,InterPro:IPR001851,UniProtKB/TrEMBL:A1JTV5,NCBI_GP:CAL12797.1;Name=CAL12797.1;gbkey=CDS;product=ribose transport system%2C permease protein;protein_id=CAL12797.1;transl_table=11
AM286415.1	EMBL	sequence_feature	2999203	2999268	.	+	.	ID=id4843;Note=10 probable transmembrane helices predicted for YE2763 by TMHMM2.0 at aa 20-41%2C 51-73%2C 78-100%2C 105-127%2C134-156%2C 179-201%2C 230-252%2C 256-278%2C 285-302 and 306-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	2999296	2999364	.	+	.	ID=id4843;Note=10 probable transmembrane helices predicted for YE2763 by TMHMM2.0 at aa 20-41%2C 51-73%2C 78-100%2C 105-127%2C134-156%2C 179-201%2C 230-252%2C 256-278%2C 285-302 and 306-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	2999377	2999445	.	+	.	ID=id4843;Note=10 probable transmembrane helices predicted for YE2763 by TMHMM2.0 at aa 20-41%2C 51-73%2C 78-100%2C 105-127%2C134-156%2C 179-201%2C 230-252%2C 256-278%2C 285-302 and 306-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	2999458	2999526	.	+	.	ID=id4843;Note=10 probable transmembrane helices predicted for YE2763 by TMHMM2.0 at aa 20-41%2C 51-73%2C 78-100%2C 105-127%2C134-156%2C 179-201%2C 230-252%2C 256-278%2C 285-302 and 306-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	2999545	2999613	.	+	.	ID=id4843;Note=10 probable transmembrane helices predicted for YE2763 by TMHMM2.0 at aa 20-41%2C 51-73%2C 78-100%2C 105-127%2C134-156%2C 179-201%2C 230-252%2C 256-278%2C 285-302 and 306-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	2999680	2999748	.	+	.	ID=id4843;Note=10 probable transmembrane helices predicted for YE2763 by TMHMM2.0 at aa 20-41%2C 51-73%2C 78-100%2C 105-127%2C134-156%2C 179-201%2C 230-252%2C 256-278%2C 285-302 and 306-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	2999833	2999901	.	+	.	ID=id4843;Note=10 probable transmembrane helices predicted for YE2763 by TMHMM2.0 at aa 20-41%2C 51-73%2C 78-100%2C 105-127%2C134-156%2C 179-201%2C 230-252%2C 256-278%2C 285-302 and 306-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	2999911	2999979	.	+	.	ID=id4843;Note=10 probable transmembrane helices predicted for YE2763 by TMHMM2.0 at aa 20-41%2C 51-73%2C 78-100%2C 105-127%2C134-156%2C 179-201%2C 230-252%2C 256-278%2C 285-302 and 306-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	2999998	3000051	.	+	.	ID=id4843;Note=10 probable transmembrane helices predicted for YE2763 by TMHMM2.0 at aa 20-41%2C 51-73%2C 78-100%2C 105-127%2C134-156%2C 179-201%2C 230-252%2C 256-278%2C 285-302 and 306-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3000061	3000129	.	+	.	ID=id4843;Note=10 probable transmembrane helices predicted for YE2763 by TMHMM2.0 at aa 20-41%2C 51-73%2C 78-100%2C 105-127%2C134-156%2C 179-201%2C 230-252%2C 256-278%2C 285-302 and 306-328;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	2999692	2999904	.	+	.	ID=id4844;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score 31.8%2C E-value 1.9e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	gene	3000319	3001146	.	-	.	ID=gene2708;Name=YE2764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2764
AM286415.1	EMBL	CDS	3000319	3001146	.	-	0	ID=cds2633;Parent=gene2708;Dbxref=EnsemblGenomes-Gn:YE2764,EnsemblGenomes-Tr:CAL12798,InterPro:IPR016040,UniProtKB/TrEMBL:A1JTV6,NCBI_GP:CAL12798.1;Name=CAL12798.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12798.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3000616	3000639	.	-	.	ID=id4845;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3001692	3002591	.	+	.	ID=gene2709;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=YE2765
AM286415.1	EMBL	CDS	3001692	3002591	.	+	0	ID=cds2634;Parent=gene2709;Dbxref=EnsemblGenomes-Gn:YE2765,EnsemblGenomes-Tr:CAL12799,GOA:A1JTV7,InterPro:IPR001348,InterPro:IPR011322,InterPro:IPR013115,InterPro:IPR013820,InterPro:IPR015867,InterPro:IPR018198,InterPro:IPR020621,NCBI_GP:CAL12799.1;Name=CAL12799.1;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=CAL12799.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3001848	3002354	.	+	.	ID=id4846;Note=Pfam match to entry PF01634 HisG%2C ATP phosphoribosyltransferase%2C score 266.6%2C E-value 2.1e-77;gbkey=misc_feature;gene=hisG;inference=protein motif:PFAM:PF01634
AM286415.1	EMBL	sequence_feature	3002157	3002222	.	+	.	ID=id4847;Note=PS01316 ATP phosphoribosyltransferase signature.;gbkey=misc_feature;gene=hisG;inference=protein motif:Prosite:PS01316
AM286415.1	EMBL	gene	3002595	3003920	.	+	.	ID=gene2710;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=YE2766
AM286415.1	EMBL	CDS	3002595	3003920	.	+	0	ID=cds2635;Parent=gene2710;Dbxref=EnsemblGenomes-Gn:YE2766,EnsemblGenomes-Tr:CAL12800,GOA:A1JTV8,InterPro:IPR001692,InterPro:IPR012131,InterPro:IPR016161,InterPro:IPR022695,UniProtKB/TrEMBL:A1JTV8,NCBI_GP:CAL12800.1;Name=CAL12800.1;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=CAL12800.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3002652	3003887	.	+	.	ID=id4848;Note=Pfam match to entry PF00815 Histidinol_dh%2CHistidinol dehydrogenase%2C score 828.8%2C E-value 1.3e-246;gbkey=misc_feature;gene=hisD;inference=protein motif:PFAM:PF00815
AM286415.1	EMBL	sequence_feature	3003291	3003389	.	+	.	ID=id4849;Note=PS00611 Histidinol dehydrogenase signature.;gbkey=misc_feature;gene=hisD;inference=protein motif:Prosite:PS00611
AM286415.1	EMBL	gene	3003917	3005041	.	+	.	ID=gene2711;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=YE2767
AM286415.1	EMBL	CDS	3003917	3005041	.	+	0	ID=cds2636;Parent=gene2711;Dbxref=EnsemblGenomes-Gn:YE2767,EnsemblGenomes-Tr:CAL12801,GOA:A1JTV9,InterPro:IPR001917,InterPro:IPR004839,InterPro:IPR005861,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,NCBI_GP:CAL12801.1;Name=CAL12801.1;gbkey=CDS;gene=hisC;product=histidinol-phosphate aminotransferase;protein_id=CAL12801.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3004124	3004984	.	+	.	ID=id4850;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 197.3%2C E-value 1.6e-56;gbkey=misc_feature;gene=hisC;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	3004550	3004579	.	+	.	ID=id4851;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=hisC;inference=protein motif:Prosite:PS00599
AM286415.1	EMBL	gene	3005038	3006105	.	+	.	ID=gene2712;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=YE2768
AM286415.1	EMBL	CDS	3005038	3006105	.	+	0	ID=cds2637;Parent=gene2712;Dbxref=EnsemblGenomes-Gn:YE2768,EnsemblGenomes-Tr:CAL12802,GOA:A1JTW0,InterPro:IPR000807,InterPro:IPR005954,InterPro:IPR006543,InterPro:IPR006549,InterPro:IPR020565,InterPro:IPR020566,InterPro:IPR020568,InterPro:IPR023214,UniProtKB/TrEMBL:A1JTW0,NCBI_GP:CAL12802.1;Name=CAL12802.1;gbkey=CDS;gene=hisB;product=histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase;protein_id=CAL12802.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3005623	3006051	.	+	.	ID=id4852;Note=Pfam match to entry PF00475 IGPD%2CImidazoleglycerol-phosphate dehydratase%2C score 347.9%2CE-value 7.3e-102;gbkey=misc_feature;gene=hisB;inference=protein motif:PFAM:PF00475
AM286415.1	EMBL	sequence_feature	3005713	3005754	.	+	.	ID=id4853;Note=PS00954 Imidazoleglycerol-phosphate dehydratase signature 1.;gbkey=misc_feature;gene=hisB;inference=protein motif:Prosite:PS00954
AM286415.1	EMBL	sequence_feature	3005992	3006030	.	+	.	ID=id4854;Note=PS00955 Imidazoleglycerol-phosphate dehydratase signature 2.;gbkey=misc_feature;gene=hisB;inference=protein motif:Prosite:PS00955
AM286415.1	EMBL	gene	3006105	3006695	.	+	.	ID=gene2713;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=YE2769
AM286415.1	EMBL	CDS	3006105	3006695	.	+	0	ID=cds2638;Parent=gene2713;Dbxref=EnsemblGenomes-Gn:YE2769,EnsemblGenomes-Tr:CAL12803,GOA:A1JTW1,InterPro:IPR010139,InterPro:IPR017926,InterPro:IPR029062,UniProtKB/TrEMBL:A1JTW1,NCBI_GP:CAL12803.1;Name=CAL12803.1;gbkey=CDS;gene=hisH;product=amidotransferase;protein_id=CAL12803.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3006114	3006692	.	+	.	ID=id4855;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 140.6%2C E-value 1.8e-39;gbkey=misc_feature;gene=hisH;inference=protein motif:PFAM:PF00117
AM286415.1	EMBL	sequence_feature	3006318	3006353	.	+	.	ID=id4856;Note=PS00442 Glutamine amidotransferases class-I active site.;gbkey=misc_feature;gene=hisH;inference=protein motif:Prosite:PS00442
AM286415.1	EMBL	gene	3006701	3007438	.	+	.	ID=gene2714;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=YE2770
AM286415.1	EMBL	CDS	3006701	3007438	.	+	0	ID=cds2639;Parent=gene2714;Dbxref=EnsemblGenomes-Gn:YE2770,EnsemblGenomes-Tr:CAL12804,GOA:A1JTW2,InterPro:IPR006062,InterPro:IPR006063,InterPro:IPR011060,InterPro:IPR013785,InterPro:IPR023016,NCBI_GP:CAL12804.1;Name=CAL12804.1;gbkey=CDS;gene=hisA;product=phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase;protein_id=CAL12804.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3006704	3007426	.	+	.	ID=id4857;Note=Pfam match to entry PF00977 His_biosynth%2C Histidine biosynthesis protein%2C score 173.5%2C E-value 2.3e-49;gbkey=misc_feature;gene=hisA;inference=protein motif:PFAM:PF00977
AM286415.1	EMBL	sequence_feature	3007289	3007321	.	+	.	ID=id4858;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hisA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3007420	3008196	.	+	.	ID=gene2715;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=YE2771
AM286415.1	EMBL	CDS	3007420	3008196	.	+	0	ID=cds2640;Parent=gene2715;Dbxref=EnsemblGenomes-Gn:YE2771,EnsemblGenomes-Tr:CAL12805,GOA:A1JTW3,InterPro:IPR004651,InterPro:IPR006062,InterPro:IPR011060,InterPro:IPR013785,NCBI_GP:CAL12805.1;Name=CAL12805.1;gbkey=CDS;gene=hisF;product=histidine biosynthesic protein (cyclase);protein_id=CAL12805.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3007429	3008163	.	+	.	ID=id4859;Note=Pfam match to entry PF00977 His_biosynth%2C Histidine biosynthesis protein%2C score 446.9%2C E-value 1.1e-131;gbkey=misc_feature;gene=hisF;inference=protein motif:PFAM:PF00977
AM286415.1	EMBL	gene	3008190	3008804	.	+	.	ID=gene2716;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;gene_synonym=hisIE;locus_tag=YE2772
AM286415.1	EMBL	CDS	3008190	3008804	.	+	0	ID=cds2641;Parent=gene2716;Dbxref=EnsemblGenomes-Gn:YE2772,EnsemblGenomes-Tr:CAL12806,GOA:A1JTW4,InterPro:IPR002496,InterPro:IPR008179,InterPro:IPR021130,InterPro:IPR023019,UniProtKB/TrEMBL:A1JTW4,NCBI_GP:CAL12806.1;Name=CAL12806.1;gbkey=CDS;gene=hisI;product=histidine biosynthesis bifunctional protein [includes: phosphoribosyl-amp cyclohydrolase;protein_id=CAL12806.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3008286	3008519	.	+	.	ID=id4860;Note=Pfam match to entry PF01502 PRA-CH%2CPhosphoribosyl-AMP cyclohydrolase%2C score 155.0%2C E-value 8.2e-44;gbkey=misc_feature;gene=hisI;inference=protein motif:PFAM:PF01502
AM286415.1	EMBL	sequence_feature	3008532	3008798	.	+	.	ID=id4861;Note=Pfam match to entry PF01503 PRA-PH%2CPhosphoribosyl-ATP pyrophosphohydrolase%2C score 158.2%2CE-value 9.4e-45;gbkey=misc_feature;gene=hisI;inference=protein motif:PFAM:PF01503
AM286415.1	EMBL	gene	3009059	3010465	.	-	.	ID=gene2717;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=YE2773
AM286415.1	EMBL	CDS	3009059	3010465	.	-	0	ID=cds2642;Parent=gene2717;Dbxref=EnsemblGenomes-Gn:YE2773,EnsemblGenomes-Tr:CAL12807,GOA:A1JTW5,InterPro:IPR006113,InterPro:IPR006114,InterPro:IPR006115,InterPro:IPR006184,InterPro:IPR008927,InterPro:IPR012284,InterPro:IPR013328,InterPro:IPR016040,UniProtKB/TrEMBL:A1JTW5,NCBI_GP:CAL12807.1;Name=CAL12807.1;gbkey=CDS;gene=gnd;product=6-phosphogluconate dehydrogenase%2Cdecarboxylating;protein_id=CAL12807.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3009062	3009937	.	-	.	ID=id4862;Note=Pfam match to entry PF00393 6PGD%2C6-phosphogluconate dehydrogenase%2C C-terminal domain %2Cscore 799.6%2C E-value 7.5e-238;gbkey=misc_feature;gene=gnd;inference=protein motif:PFAM:PF00393
AM286415.1	EMBL	sequence_feature	3009671	3009709	.	-	.	ID=id4863;Note=PS00461 6-phosphogluconate dehydrogenase signature.;gbkey=misc_feature;gene=gnd;inference=protein motif:Prosite:PS00461
AM286415.1	EMBL	sequence_feature	3009941	3010459	.	-	.	ID=id4864;Note=Pfam match to entry PF03446 NAD_binding_2%2C NAD binding domain of 6-phosphogluconate dehydrogenase%2C score 402.8%2C E-value 2.1e-118;gbkey=misc_feature;gene=gnd;inference=protein motif:PFAM:PF03446
AM286415.1	EMBL	repeat_region	3010694	3012101	.	+	.	ID=id4865;Note=IS4-like insertion sequence element IS1660;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	3010694	3010709	.	+	.	ID=id4866;Note=Inverted repeat for IS4-like element;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	3010777	3012114	.	+	.	ID=gene2718;Name=YE2774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2774
AM286415.1	EMBL	CDS	3010777	3012114	.	+	0	ID=cds2643;Parent=gene2718;Dbxref=EnsemblGenomes-Gn:YE2774,EnsemblGenomes-Tr:CAL12808,GOA:A1JJC5,InterPro:IPR002559,InterPro:IPR012337,InterPro:IPR024473,UniProtKB/TrEMBL:A1JJC5,NCBI_GP:CAL12808.1;Name=CAL12808.1;Note=ighly similar to many transposases from the IS element IS4 including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 2e-165%2C 89.72 id in 438 aa%2C and to Pantoea agglomerans nsertion element protein SWALL:P71168 (EMBL:X81894) (440 aa) fasta scores: E(): 1.8e-86%2C 52.42 38d in 433 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1660;protein_id=CAL12808.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3011155	3011832	.	+	.	ID=id4867;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 160.8%2C E-value 1.5e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	repeat_region	3012087	3012102	.	+	.	ID=id4868;Note=alternate type inverted repeat for IS4-like element IS1660;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	3012087	3012965	.	+	.	ID=id4869;Note=IS4-like insertion sequence element IS1665;gbkey=repeat_region
AM286415.1	EMBL	gene	3012170	3012619	.	+	.	ID=gene2719;Name=YE2775;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2775;part=1/2
AM286415.1	EMBL	gene	3012621	3012956	.	+	.	ID=gene2719;Name=YE2775;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2775;part=2/2
AM286415.1	EMBL	CDS	3012170	3012619	.	+	0	ID=cds2644;Parent=gene2719;Dbxref=EnsemblGenomes-Gn:YE2775,EnsemblGenomes-Tr:CAL12809,InterPro:IPR024473,UniProtKB/TrEMBL:A1JJC4,NCBI_GP:CAL12809.1;Name=CAL12809.1;Note=Similar to the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 3.9e-52%2C 50.22 38d in 440 aa%2C and to Shigella flexneri IS4 orf s0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 3.9e-52%2C 48.81 38d in 422 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting%2C following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.%3B YE2776;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL12809.1;transl_table=11
AM286415.1	EMBL	CDS	3012621	3012956	.	+	0	ID=cds2644;Parent=gene2719;Dbxref=EnsemblGenomes-Gn:YE2775,EnsemblGenomes-Tr:CAL12809,InterPro:IPR024473,UniProtKB/TrEMBL:A1JJC4,NCBI_GP:CAL12809.1;Name=CAL12809.1;Note=Similar to the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 3.9e-52%2C 50.22 38d in 440 aa%2C and to Shigella flexneri IS4 orf s0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 3.9e-52%2C 48.81 38d in 422 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting%2C following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.%3B YE2776;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL12809.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3012620	3012626	.	+	.	ID=id4870;Note=possible site of programmed ribosomal slippage;gbkey=misc_feature
AM286415.1	EMBL	stem_loop	3012933	3012964	.	+	.	ID=id4871;gbkey=stem_loop
AM286415.1	EMBL	INVERTED	3012950	3012965	.	-	.	ID=id4872;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	3013002	3013895	.	-	.	ID=gene2720;Name=galF;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=YE2777
AM286415.1	EMBL	CDS	3013002	3013895	.	-	0	ID=cds2645;Parent=gene2720;Dbxref=EnsemblGenomes-Gn:YE2777,EnsemblGenomes-Tr:CAL12810,GOA:A1JTW8,InterPro:IPR005771,InterPro:IPR005835,InterPro:IPR029044,UniProtKB/TrEMBL:A1JTW8,NCBI_GP:CAL12810.1;Name=CAL12810.1;gbkey=CDS;gene=galF;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=CAL12810.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3013044	3013883	.	-	.	ID=id4873;Note=Pfam match to entry PF00483 NTP_transferase%2CNucleotidyl transferase%2C score -1.7%2C E-value 3e-08;gbkey=misc_feature;gene=galF;inference=protein motif:PFAM:PF00483
AM286415.1	EMBL	gene	3013961	3014842	.	-	.	ID=gene2721;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=YE2778
AM286415.1	EMBL	CDS	3013961	3014842	.	-	0	ID=cds2646;Parent=gene2721;Dbxref=EnsemblGenomes-Gn:YE2778,EnsemblGenomes-Tr:CAL12811,GOA:A1JTW9,InterPro:IPR005771,InterPro:IPR005835,InterPro:IPR029044,UniProtKB/TrEMBL:A1JTW9,NCBI_GP:CAL12811.1;Name=CAL12811.1;gbkey=CDS;gene=galU;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=CAL12811.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3014015	3014839	.	-	.	ID=id4874;Note=Pfam match to entry PF00483 NTP_transferase%2CNucleotidyl transferase%2C score 13.8%2C E-value 3.3e-09;gbkey=misc_feature;gene=galU;inference=protein motif:PFAM:PF00483
AM286415.1	EMBL	sequence_feature	3014072	3014095	.	-	.	ID=id4875;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=galU;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3015331	3016917	.	+	.	ID=gene2722;Name=YE2779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2779
AM286415.1	EMBL	CDS	3015331	3016917	.	+	0	ID=cds2647;Parent=gene2722;Dbxref=EnsemblGenomes-Gn:YE2779,EnsemblGenomes-Tr:CAL12812,GOA:A1JTX0,InterPro:IPR000644,InterPro:IPR005170,InterPro:IPR005496,InterPro:IPR016166,InterPro:IPR016169,UniProtKB/TrEMBL:A1JTX0,NCBI_GP:CAL12812.1;Name=CAL12812.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12812.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3015346	3016017	.	+	.	ID=id4876;Note=Pfam match to entry PF03741 TerC%2C Integral membrane protein TerC family%2C score 275.8%2C E-value 3.6e-80;gbkey=misc_feature;inference=protein motif:PFAM:PF03741
AM286415.1	EMBL	sequence_feature	3015367	3015435	.	+	.	ID=id4877;Note=6 probable transmembrane helices predicted for YE2779 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172 and 185-207;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3015472	3015540	.	+	.	ID=id4877;Note=6 probable transmembrane helices predicted for YE2779 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172 and 185-207;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3015583	3015636	.	+	.	ID=id4877;Note=6 probable transmembrane helices predicted for YE2779 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172 and 185-207;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3015697	3015765	.	+	.	ID=id4877;Note=6 probable transmembrane helices predicted for YE2779 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172 and 185-207;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3015793	3015846	.	+	.	ID=id4877;Note=6 probable transmembrane helices predicted for YE2779 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172 and 185-207;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3015883	3015951	.	+	.	ID=id4877;Note=6 probable transmembrane helices predicted for YE2779 by TMHMM2.0 at aa 13-35%2C 48-70%2C 85-102%2C 123-145%2C155-172 and 185-207;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	3016252	3016419	.	+	.	ID=id4878;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 33.8%2C E-value 2.6e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	3016441	3016602	.	+	.	ID=id4879;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 37.1%2C E-value 2.7e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	3016651	3016890	.	+	.	ID=id4880;Note=Pfam match to entry PF03471 CorC_HlyC%2C Transporter associated domain%2C score 97.8%2C E-value 1.4e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF03471
AM286415.1	EMBL	gene	3017011	3018369	.	-	.	ID=gene2723;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=YE2780
AM286415.1	EMBL	CDS	3017011	3018369	.	-	0	ID=cds2648;Parent=gene2723;Dbxref=EnsemblGenomes-Gn:YE2780,EnsemblGenomes-Tr:CAL12813,GOA:A1JTX1,InterPro:IPR004669,InterPro:IPR018385,UniProtKB/TrEMBL:A1JTX1,NCBI_GP:CAL12813.1;Name=CAL12813.1;Note=Similar to Escherichia coli anaerobic C4-dicarboxylate transporter DcuC SWALL:DCUC_ECOLI (SWALL:Q47134) (461 aa) fasta scores: E(): 2.2e-140%2C85.49 38d in 448 aa%2C and to Salmonella typhi C4-dicarboxylate anaerobic carrier STY0676 SWALL:Q8Z8I5 (EMBL:AL627267) (461 aa) fasta scores: E(): 3.3e-140%2C84.63 38d in 449 aa;gbkey=CDS;gene=dcuC;inference=similar to sequence:UniProtKB:Q47134;product=anaerobic C4-dicarboxylate transporter;protein_id=CAL12813.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3017335	3018183	.	-	.	ID=id4881;Note=Pfam match to entry PF03606 DcuC%2C C4-dicarboxylate anaerobic carrier%2C score 616.5%2C E-value 1e-182;gbkey=misc_feature;gene=dcuC;inference=protein motif:PFAM:PF03606
AM286415.1	EMBL	sequence_feature	3018313	3018372	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3018241	3018294	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3018070	3018138	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3017977	3018036	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3017908	3017967	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3017827	3017895	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3017725	3017784	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3017599	3017667	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3017503	3017571	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3017410	3017478	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3017314	3017382	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3017017	3017085	.	-	.	ID=id4882;Note=12 probable transmembrane helices predicted for YE2780 by TMHMM2.0 at aa 25-44%2C 51-68%2C 103-125%2C 137-156%2C160-179%2C 184-206%2C 221-240%2C 260-282%2C 292-314%2C 323-345%2C355-377 and 454-476;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	3018701	3020548	.	-	.	ID=gene2724;Name=YE2781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2781
AM286415.1	EMBL	CDS	3018701	3020548	.	-	0	ID=cds2649;Parent=gene2724;Dbxref=EnsemblGenomes-Gn:YE2781,EnsemblGenomes-Tr:CAL12814,InterPro:IPR007844,UniProtKB/TrEMBL:A1JTX2,NCBI_GP:CAL12814.1;Name=CAL12814.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12814.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3020471	3020530	.	-	.	ID=id4883;Note=1 probable transmembrane helix predicted for YE2781 by TMHMM2.0 at aa 7-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3020613	3021194	.	-	.	ID=gene2725;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;gene_synonym=b2065,dus,paxA;locus_tag=YE2782
AM286415.1	EMBL	CDS	3020613	3021194	.	-	0	ID=cds2650;Parent=gene2725;Dbxref=EnsemblGenomes-Gn:YE2782,EnsemblGenomes-Tr:CAL12815,GOA:A1JTX3,InterPro:IPR008180,InterPro:IPR011962,InterPro:IPR029054,NCBI_GP:CAL12815.1;Name=CAL12815.1;gbkey=CDS;gene=dcd;product=deoxycytidine triphosphate deaminase;protein_id=CAL12815.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3020628	3021047	.	-	.	ID=id4884;Note=Pfam match to entry PF00692 dUTPase%2C dUTPase %2Cscore 135.1%2C E-value 8.3e-38;gbkey=misc_feature;gene=dcd;inference=protein motif:PFAM:PF00692
AM286415.1	EMBL	gene	3021280	3021921	.	-	.	ID=gene2726;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;gene_synonym=b2066;locus_tag=YE2783
AM286415.1	EMBL	CDS	3021280	3021921	.	-	0	ID=cds2651;Parent=gene2726;Dbxref=EnsemblGenomes-Gn:YE2783,EnsemblGenomes-Tr:CAL12816,GOA:A1JTX4,InterPro:IPR000764,InterPro:IPR006083,InterPro:IPR026008,InterPro:IPR027417,NCBI_GP:CAL12816.1;Name=CAL12816.1;gbkey=CDS;gene=udk;product=uridine kinase;protein_id=CAL12816.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3021283	3021894	.	-	.	ID=id4885;Note=Pfam match to entry PF00485 PRK%2CPhosphoribulokinase / Uridine kinase family%2C score 117.1%2CE-value 2.1e-32;gbkey=misc_feature;gene=udk;inference=protein motif:PFAM:PF00485
AM286415.1	EMBL	sequence_feature	3021856	3021879	.	-	.	ID=id4886;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=udk;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3022059	3023171	.	-	.	ID=gene2727;Name=YE2784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2784
AM286415.1	EMBL	CDS	3022059	3023171	.	-	0	ID=cds2652;Parent=gene2727;Dbxref=EnsemblGenomes-Gn:YE2784,EnsemblGenomes-Tr:CAL12817,GOA:A1JTX5,InterPro:IPR000808,InterPro:IPR019591,InterPro:IPR025669,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTX5,NCBI_GP:CAL12817.1;Name=CAL12817.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12817.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3022482	3022532	.	-	.	ID=id4887;Note=PS01215 Mrp family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01215
AM286415.1	EMBL	sequence_feature	3022803	3022826	.	-	.	ID=id4888;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3023451	3025478	.	+	.	ID=gene2728;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=YE2785
AM286415.1	EMBL	CDS	3023451	3025478	.	+	0	ID=cds2653;Parent=gene2728;Dbxref=EnsemblGenomes-Gn:YE2785,EnsemblGenomes-Tr:CAL12818,GOA:A1JTX6,InterPro:IPR001412,InterPro:IPR002547,InterPro:IPR004495,InterPro:IPR009080,InterPro:IPR012340,InterPro:IPR014729,InterPro:IPR014758,InterPro:IPR015413,InterPro:IPR023458,InterPro:IPR029038,NCBI_GP:CAL12818.1;Name=CAL12818.1;gbkey=CDS;gene=metG;product=methionyl-tRNA synthetase;protein_id=CAL12818.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3023451	3024563	.	+	.	ID=id4889;Note=Pfam match to entry PF00133 tRNA-synt_1%2C tRNA synthetases class I (I%2C L%2C M and V)%2C score -224.5%2CE-value 4e-07;gbkey=misc_feature;gene=metG;inference=protein motif:PFAM:PF00133
AM286415.1	EMBL	sequence_feature	3023493	3023528	.	+	.	ID=id4890;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=metG;inference=protein motif:Prosite:PS00178
AM286415.1	EMBL	sequence_feature	3025185	3025469	.	+	.	ID=id4891;Note=Pfam match to entry PF01588 tRNA_bind%2C Putative tRNA binding domain%2C score 143.9%2C E-value 1.8e-40;gbkey=misc_feature;gene=metG;inference=protein motif:PFAM:PF01588
AM286415.1	EMBL	gene	3025558	3026394	.	-	.	ID=gene2729;Name=YE2786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2786
AM286415.1	EMBL	CDS	3025558	3026394	.	-	0	ID=cds2654;Parent=gene2729;Dbxref=EnsemblGenomes-Gn:YE2786,EnsemblGenomes-Tr:CAL12819,UniProtKB/TrEMBL:A1JTX7,NCBI_GP:CAL12819.1;Name=CAL12819.1;Note=Poor database matches. C-terminal region is similar to Yersinia pestis putative membrane protein YPO1518 SWALL:Q8ZG02 (EMBL:AJ414148) (175 aa) fasta scores: E(): 7.8e-41%2C 63.42 38d in 175 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414148;product=putative membrane protein;protein_id=CAL12819.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3026212	3026280	.	-	.	ID=id4892;Note=8 probable transmembrane helices predicted for YE2786 by TMHMM2.0 at aa 39-61%2C 71-90%2C 97-114%2C 118-136%2C157-177%2C 182-196%2C 203-225 and 240-262;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3026125	3026184	.	-	.	ID=id4892;Note=8 probable transmembrane helices predicted for YE2786 by TMHMM2.0 at aa 39-61%2C 71-90%2C 97-114%2C 118-136%2C157-177%2C 182-196%2C 203-225 and 240-262;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3026053	3026106	.	-	.	ID=id4892;Note=8 probable transmembrane helices predicted for YE2786 by TMHMM2.0 at aa 39-61%2C 71-90%2C 97-114%2C 118-136%2C157-177%2C 182-196%2C 203-225 and 240-262;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3025987	3026043	.	-	.	ID=id4892;Note=8 probable transmembrane helices predicted for YE2786 by TMHMM2.0 at aa 39-61%2C 71-90%2C 97-114%2C 118-136%2C157-177%2C 182-196%2C 203-225 and 240-262;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3025864	3025926	.	-	.	ID=id4892;Note=8 probable transmembrane helices predicted for YE2786 by TMHMM2.0 at aa 39-61%2C 71-90%2C 97-114%2C 118-136%2C157-177%2C 182-196%2C 203-225 and 240-262;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3025807	3025851	.	-	.	ID=id4892;Note=8 probable transmembrane helices predicted for YE2786 by TMHMM2.0 at aa 39-61%2C 71-90%2C 97-114%2C 118-136%2C157-177%2C 182-196%2C 203-225 and 240-262;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3025720	3025788	.	-	.	ID=id4892;Note=8 probable transmembrane helices predicted for YE2786 by TMHMM2.0 at aa 39-61%2C 71-90%2C 97-114%2C 118-136%2C157-177%2C 182-196%2C 203-225 and 240-262;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3025609	3025677	.	-	.	ID=id4892;Note=8 probable transmembrane helices predicted for YE2786 by TMHMM2.0 at aa 39-61%2C 71-90%2C 97-114%2C 118-136%2C157-177%2C 182-196%2C 203-225 and 240-262;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	3026840	3027931	.	+	.	ID=gene2730;Name=YE2787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2787
AM286415.1	EMBL	CDS	3026840	3027931	.	+	0	ID=cds2655;Parent=gene2730;Dbxref=EnsemblGenomes-Gn:YE2787,EnsemblGenomes-Tr:CAL12820,InterPro:IPR025997,InterPro:IPR028082,UniProtKB/TrEMBL:A1JTX8,NCBI_GP:CAL12820.1;Name=CAL12820.1;gbkey=CDS;product=putative sugar ABC transporter;protein_id=CAL12820.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3026876	3026944	.	+	.	ID=id4893;Note=1 probable transmembrane helix predicted for YE2787 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3026966	3027820	.	+	.	ID=id4894;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score -60.4%2C E-value 0.1;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	3028130	3029383	.	+	.	ID=gene2731;Name=YE2788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2788
AM286415.1	EMBL	CDS	3028130	3029383	.	+	0	ID=cds2656;Parent=gene2731;Dbxref=EnsemblGenomes-Gn:YE2788,EnsemblGenomes-Tr:CAL12821,InterPro:IPR011048,UniProtKB/TrEMBL:A1JTX9,NCBI_GP:CAL12821.1;Name=CAL12821.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12821.1;transl_table=11
AM286415.1	EMBL	gene	3029582	3030802	.	+	.	ID=gene2732;Name=YE2789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2789
AM286415.1	EMBL	CDS	3029582	3030802	.	+	0	ID=cds2657;Parent=gene2732;Dbxref=EnsemblGenomes-Gn:YE2789,EnsemblGenomes-Tr:CAL12822,GOA:A1JTY0,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JTY0,NCBI_GP:CAL12822.1;Name=CAL12822.1;gbkey=CDS;product=putative multidrug resistance protein;protein_id=CAL12822.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3029615	3029683	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3029711	3029779	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3029798	3029857	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3029873	3029941	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3029978	3030046	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3030059	3030112	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3030218	3030277	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3030320	3030388	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3030422	3030481	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3030494	3030562	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3030617	3030676	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3030686	3030739	.	+	.	ID=id4895;Note=12 probable transmembrane helices predicted for YE2789 by TMHMM2.0 at aa 12-34%2C 44-66%2C 73-92%2C 98-120%2C133-155%2C 160-177%2C 213-232%2C 247-269%2C 281-300%2C 305-327%2C346-365 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	3030901	3031308	.	+	.	ID=gene2733;Name=yohJ;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=YE2790
AM286415.1	EMBL	CDS	3030901	3031308	.	+	0	ID=cds2658;Parent=gene2733;Dbxref=EnsemblGenomes-Gn:YE2790,EnsemblGenomes-Tr:CAL12823,GOA:A1JTY1,InterPro:IPR005538,InterPro:IPR022957,NCBI_GP:CAL12823.1;Name=CAL12823.1;gbkey=CDS;gene=yohJ;product=putative membrane protein;protein_id=CAL12823.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3030931	3031260	.	+	.	ID=id4896;Note=Pfam match to entry PF03788 LrgA%2C LrgA family %2Cscore 176.3%2C E-value 3.2e-50;gbkey=misc_feature;gene=yohJ;inference=protein motif:PFAM:PF03788
AM286415.1	EMBL	sequence_feature	3030934	3031002	.	+	.	ID=id4897;Note=4 probable transmembrane helices predicted for YE2790 by TMHMM2.0 at aa 12-34%2C 38-60%2C 67-86 and 96-118;gbkey=misc_feature;gene=yohJ;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3031012	3031080	.	+	.	ID=id4897;Note=4 probable transmembrane helices predicted for YE2790 by TMHMM2.0 at aa 12-34%2C 38-60%2C 67-86 and 96-118;gbkey=misc_feature;gene=yohJ;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3031099	3031158	.	+	.	ID=id4897;Note=4 probable transmembrane helices predicted for YE2790 by TMHMM2.0 at aa 12-34%2C 38-60%2C 67-86 and 96-118;gbkey=misc_feature;gene=yohJ;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3031186	3031254	.	+	.	ID=id4897;Note=4 probable transmembrane helices predicted for YE2790 by TMHMM2.0 at aa 12-34%2C 38-60%2C 67-86 and 96-118;gbkey=misc_feature;gene=yohJ;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	3031305	3032000	.	+	.	ID=gene2734;Name=yohK;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=YE2791
AM286415.1	EMBL	CDS	3031305	3032000	.	+	0	ID=cds2659;Parent=gene2734;Dbxref=EnsemblGenomes-Gn:YE2791,EnsemblGenomes-Tr:CAL12824,InterPro:IPR005261,InterPro:IPR007300,UniProtKB/TrEMBL:A1JTY2,NCBI_GP:CAL12824.1;Name=CAL12824.1;gbkey=CDS;gene=yohK;product=putative membrane protein;protein_id=CAL12824.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3031317	3031376	.	+	.	ID=id4898;Note=5 probable transmembrane helices predicted for YE2791 by TMHMM2.0 at aa 5-24%2C 34-56%2C 91-113%2C 145-167 and 201-223;gbkey=misc_feature;gene=yohK;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3031404	3031472	.	+	.	ID=id4898;Note=5 probable transmembrane helices predicted for YE2791 by TMHMM2.0 at aa 5-24%2C 34-56%2C 91-113%2C 145-167 and 201-223;gbkey=misc_feature;gene=yohK;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3031575	3031643	.	+	.	ID=id4898;Note=5 probable transmembrane helices predicted for YE2791 by TMHMM2.0 at aa 5-24%2C 34-56%2C 91-113%2C 145-167 and 201-223;gbkey=misc_feature;gene=yohK;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3031737	3031805	.	+	.	ID=id4898;Note=5 probable transmembrane helices predicted for YE2791 by TMHMM2.0 at aa 5-24%2C 34-56%2C 91-113%2C 145-167 and 201-223;gbkey=misc_feature;gene=yohK;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3031905	3031973	.	+	.	ID=id4898;Note=5 probable transmembrane helices predicted for YE2791 by TMHMM2.0 at aa 5-24%2C 34-56%2C 91-113%2C 145-167 and 201-223;gbkey=misc_feature;gene=yohK;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	3032139	3033023	.	+	.	ID=gene2735;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=YE2792
AM286415.1	EMBL	CDS	3032139	3033023	.	+	0	ID=cds2660;Parent=gene2735;Dbxref=EnsemblGenomes-Gn:YE2792,EnsemblGenomes-Tr:CAL12825,GOA:A1JTY3,InterPro:IPR002125,InterPro:IPR006263,InterPro:IPR013171,InterPro:IPR016192,InterPro:IPR016193,InterPro:IPR020797,UniProtKB/TrEMBL:A1JTY3,NCBI_GP:CAL12825.1;Name=CAL12825.1;gbkey=CDS;gene=cdd;product=cytidine deaminase;protein_id=CAL12825.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3032151	3032198	.	+	.	ID=id4899;Note=PS00024 Hemopexin domain signature.;gbkey=misc_feature;gene=cdd;inference=protein motif:Prosite:PS00024
AM286415.1	EMBL	sequence_feature	3032277	3032585	.	+	.	ID=id4900;Note=Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region%2C score 64.3%2C E-value 1.7e-16;gbkey=misc_feature;gene=cdd;inference=protein motif:PFAM:PF00383
AM286415.1	EMBL	sequence_feature	3032295	3032327	.	+	.	ID=id4901;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cdd;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3032442	3032546	.	+	.	ID=id4902;Note=PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature.;gbkey=misc_feature;gene=cdd;inference=protein motif:Prosite:PS00903
AM286415.1	EMBL	sequence_feature	3032964	3032996	.	+	.	ID=id4903;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cdd;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3033097	3033444	.	-	.	ID=gene2736;Name=YE2793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2793
AM286415.1	EMBL	CDS	3033097	3033444	.	-	0	ID=cds2661;Parent=gene2736;Dbxref=EnsemblGenomes-Gn:YE2793,EnsemblGenomes-Tr:CAL12826,UniProtKB/TrEMBL:A1JTY4,NCBI_GP:CAL12826.1;Name=CAL12826.1;Note=No significant database matches;gbkey=CDS;product=putative lipoprotein;protein_id=CAL12826.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3033397	3033429	.	-	.	ID=id4904;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3033911	3035608	.	+	.	ID=gene2737;Name=sfcA;gbkey=Gene;gene=sfcA;gene_biotype=protein_coding;gene_synonym=maeA;locus_tag=YE2794
AM286415.1	EMBL	CDS	3033911	3035608	.	+	0	ID=cds2662;Parent=gene2737;Dbxref=EnsemblGenomes-Gn:YE2794,EnsemblGenomes-Tr:CAL12827,GOA:A1JTY5,InterPro:IPR001891,InterPro:IPR012301,InterPro:IPR012302,InterPro:IPR015884,InterPro:IPR016040,InterPro:IPR023667,NCBI_GP:CAL12827.1;Name=CAL12827.1;gbkey=CDS;gene=sfcA;product=NAD-dependent malic enzyme;protein_id=CAL12827.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3034151	3034717	.	+	.	ID=id4905;Note=Pfam match to entry PF00390 malic%2C Malic enzyme%2CN-terminal domain%2C score 419.9%2C E-value 1.5e-123;gbkey=misc_feature;gene=sfcA;inference=protein motif:PFAM:PF00390
AM286415.1	EMBL	sequence_feature	3034709	3034759	.	+	.	ID=id4906;Note=PS00331 Malic enzymes signature.;gbkey=misc_feature;gene=sfcA;inference=protein motif:Prosite:PS00331
AM286415.1	EMBL	sequence_feature	3034721	3035503	.	+	.	ID=id4907;Note=Pfam match to entry PF03949 malic_N%2C Malic enzyme%2CNAD binding domain%2C score 447.7%2C E-value 6.4e-132;gbkey=misc_feature;gene=sfcA;inference=protein motif:PFAM:PF03949
AM286415.1	EMBL	sequence_feature	3034802	3034834	.	+	.	ID=id4908;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=sfcA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3035775	3036578	.	+	.	ID=gene2738;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=YE2795
AM286415.1	EMBL	CDS	3035775	3036578	.	+	0	ID=cds2663;Parent=gene2738;Dbxref=EnsemblGenomes-Gn:YE2795,EnsemblGenomes-Tr:CAL12828,InterPro:IPR003848,InterPro:IPR014729,InterPro:IPR023604,UniProtKB/TrEMBL:A1JTY6,NCBI_GP:CAL12828.1;Name=CAL12828.1;gbkey=CDS;gene=sanA;product=putative exported protein;protein_id=CAL12828.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3035787	3035855	.	+	.	ID=id4909;Note=1 probable transmembrane helix predicted for YE2795 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;gene=sanA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3036629	3036907	.	-	.	ID=gene2739;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=YE2796
AM286415.1	EMBL	CDS	3036629	3036907	.	-	0	ID=cds2664;Parent=gene2739;Dbxref=EnsemblGenomes-Gn:YE2796,EnsemblGenomes-Tr:CAL12829,InterPro:IPR001109,InterPro:IPR019812,UniProtKB/TrEMBL:A1JTY7,NCBI_GP:CAL12829.1;Name=CAL12829.1;Note=Similar to Escherichia coli hydrogenase isoenzymes formation protein HypC SWALL:HYPC_ECOLI (SWALL:P24191) (90 aa) fasta scores: E(): 8.2e-15%2C 52.17 38d in 92 aa%2C and to Proteus vulgaris frd operon hypothetical protein C SWALL:YFRC_PROVU (SWALL:P20927) (96 aa) fasta scores: E(): 4e-16%2C 58.69 38d in 92 aa;gbkey=CDS;gene=hypC;inference=similar to sequence:UniProtKB:P24191;product=putative hydrogenase isoenzymes formation protein;protein_id=CAL12829.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3036656	3036907	.	-	.	ID=id4910;Note=Pfam match to entry PF01455 HupF_HypC%2C HupF/HypC family%2C score 131.1%2C E-value 1.3e-36;gbkey=misc_feature;gene=hypC;inference=protein motif:PFAM:PF01455
AM286415.1	EMBL	gene	3036948	3037295	.	-	.	ID=gene2740;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=YE2797
AM286415.1	EMBL	CDS	3036948	3037295	.	-	0	ID=cds2665;Parent=gene2740;Dbxref=EnsemblGenomes-Gn:YE2797,EnsemblGenomes-Tr:CAL12830,GOA:A1JTY8,InterPro:IPR000688,InterPro:IPR020538,UniProtKB/TrEMBL:A1JTY8,NCBI_GP:CAL12830.1;Name=CAL12830.1;Note=Similar to Escherichia coli probable hydrogenase nickel incorporation protein HybF SWALL:HYBF_ECOLI (SWALL:P37184) (113 aa) fasta scores: E(): 1.5e-22%2C 48.69 id in 115 aa%2C and to Escherichia coli HypA protein SWALL:HYPA_ECOLI (SWALL:P24189) (116 aa) fasta scores: E(): 2.3e-29%2C 60.87 38d in 115 aa;gbkey=CDS;gene=hypA;inference=similar to sequence:UniProtKB:P37184;product=putative hydrogenase nickel incorporation protein;protein_id=CAL12830.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3036951	3037295	.	-	.	ID=id4911;Note=Pfam match to entry PF01155 HypA%2C Hydrogenase expression/synthesis hypA family%2C score 177.3%2C E-value 1.6e-50;gbkey=misc_feature;gene=hypA;inference=protein motif:PFAM:PF01155
AM286415.1	EMBL	sequence_feature	3037017	3037160	.	-	.	ID=id4912;Note=PS01249 Hydrogenases expression/synthesis hypA family signature.;gbkey=misc_feature;gene=hypA;inference=protein motif:Prosite:PS01249
AM286415.1	EMBL	sequence_feature	3037197	3037232	.	-	.	ID=id4913;Note=PS00213 Lipocalin signature.;gbkey=misc_feature;gene=hypA;inference=protein motif:Prosite:PS00213
AM286415.1	EMBL	gene	3037703	3038344	.	+	.	ID=gene2741;Name=hyfA;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=YE2798
AM286415.1	EMBL	CDS	3037703	3038344	.	+	0	ID=cds2666;Parent=gene2741;Dbxref=EnsemblGenomes-Gn:YE2798,EnsemblGenomes-Tr:CAL12831,GOA:A1JTY9,InterPro:IPR001450,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JTY9,NCBI_GP:CAL12831.1;Name=CAL12831.1;Note=Similar to Escherichia coli formate hydrogenlyase subunit 2 HycB or HevB SWALL:HYCB_ECOLI (SWALL:P16428) (203 aa) fasta scores: E(): 3.2e-40%2C 53.84 38d in 208 aa%2Cand to Similar to Escherichia coli hydrogenase-4 component A HyfA SWALL:HYFA_ECOLI (SWALL:P23481) (205 aa) fasta scores: E(): 2e-38%2C 50.25 38d in 193 aa;gbkey=CDS;gene=hyfA;inference=similar to sequence:UniProtKB:P23481;product=hydrogenase-4 component A;protein_id=CAL12831.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3037832	3037909	.	+	.	ID=id4914;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 8.5%2C E-value 0.0081;gbkey=misc_feature;gene=hyfA;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	3037925	3037996	.	+	.	ID=id4915;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 35.0%2C E-value 1.1e-07;gbkey=misc_feature;gene=hyfA;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	3037946	3037981	.	+	.	ID=id4916;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=hyfA;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	3038341	3040368	.	+	.	ID=gene2742;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=protein_coding;locus_tag=YE2799
AM286415.1	EMBL	CDS	3038341	3040368	.	+	0	ID=cds2667;Parent=gene2742;Dbxref=EnsemblGenomes-Gn:YE2799,EnsemblGenomes-Tr:CAL12832,GOA:A1JTZ0,InterPro:IPR001750,InterPro:IPR003918,UniProtKB/TrEMBL:A1JTZ0,NCBI_GP:CAL12832.1;Name=CAL12832.1;Note=Similar to Escherichia coli hydrogenase-4 component B HyfB SWALL:HYFB_ECOLI (SWALL:P23482) (672 aa) fasta scores: E(): 1.5e-144%2C 57.84 38d in 676 aa%2C and to Escherichia coli formate hydrogenlyase subunit 3 HycC or HevC SWALL:HYCC_ECOLI (SWALL:P16429) (608 aa) fasta scores: E(): 1.7e-62%2C 38.58 38d in 609 aa;gbkey=CDS;gene=hyfB;inference=similar to sequence:UniProtKB:P23482;product=hydrogenase-4 component B;protein_id=CAL12832.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3038350	3038418	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=1/16
AM286415.1	EMBL	sequence_feature	3038455	3038523	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=2/16
AM286415.1	EMBL	sequence_feature	3038581	3038649	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=3/16
AM286415.1	EMBL	sequence_feature	3038668	3038736	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=4/16
AM286415.1	EMBL	sequence_feature	3038746	3038799	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=5/16
AM286415.1	EMBL	sequence_feature	3038833	3038901	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=6/16
AM286415.1	EMBL	sequence_feature	3038968	3039036	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=7/16
AM286415.1	EMBL	sequence_feature	3039073	3039141	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=8/16
AM286415.1	EMBL	sequence_feature	3039154	3039222	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=9/16
AM286415.1	EMBL	sequence_feature	3039259	3039318	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=10/16
AM286415.1	EMBL	sequence_feature	3039361	3039429	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=11/16
AM286415.1	EMBL	sequence_feature	3039490	3039558	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=12/16
AM286415.1	EMBL	sequence_feature	3039601	3039669	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=13/16
AM286415.1	EMBL	sequence_feature	3039766	3039834	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=14/16
AM286415.1	EMBL	sequence_feature	3039934	3040002	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=15/16
AM286415.1	EMBL	sequence_feature	3040303	3040362	.	+	.	ID=id4917;Note=16 probable transmembrane helices predicted for YE2799 by TMHMM2.0 at aa 4-26%2C 39-61%2C 81-103%2C 110-132%2C136-153%2C 165-187%2C 210-232%2C 245-267%2C 272-294%2C 307-326%2C341-363%2C 384-406%2C 421-443%2C 476-498%2C 532-554 and 655-674;gbkey=misc_feature;gene=hyfB;inference=protein motif:TMHMM:2.0;part=16/16
AM286415.1	EMBL	sequence_feature	3038734	3039672	.	+	.	ID=id4918;Note=Pfam match to entry PF00361 oxidored_q1%2CNADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 206.5%2C E-value 2.7e-59;gbkey=misc_feature;gene=hyfB;inference=protein motif:PFAM:PF00361
AM286415.1	EMBL	gene	3040380	3041333	.	+	.	ID=gene2743;Name=hyfC;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=YE2800
AM286415.1	EMBL	CDS	3040380	3041333	.	+	0	ID=cds2668;Parent=gene2743;Dbxref=EnsemblGenomes-Gn:YE2800,EnsemblGenomes-Tr:CAL12833,GOA:A1JTZ1,InterPro:IPR001694,InterPro:IPR018086,UniProtKB/TrEMBL:A1JTZ1,NCBI_GP:CAL12833.1;Name=CAL12833.1;Note=Similar to Escherichia coli formate hydrogenlyase subunit 4 HycD or HevD SWALL:HYCD_ECOLI (SWALL:P16430) (307 aa) fasta scores: E(): 7.6e-63%2C 57.37 38d in 305 aa%2Cand to Escherichia coli hydrogenase-4 component C HyfC SWALL:HYFC_ECOLI (SWALL:P77858) (315 aa) fasta scores: E(): 1.3e-75%2C 67.1 38d in 307 aa;gbkey=CDS;gene=hyfC;inference=similar to sequence:UniProtKB:P77858;product=hydrogenase-4 component C;protein_id=CAL12833.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3040401	3041330	.	+	.	ID=id4919;Note=Pfam match to entry PF00146 NADHdh%2C NADH dehydrogenase%2C score 154.2%2C E-value 1.5e-43;gbkey=misc_feature;gene=hyfC;inference=protein motif:PFAM:PF00146
AM286415.1	EMBL	sequence_feature	3040407	3040475	.	+	.	ID=id4920;Note=8 probable transmembrane helices predicted for YE2800 by TMHMM2.0 at aa 10-32%2C 71-93%2C 98-120%2C 141-163%2C178-197%2C 238-257%2C 261-283 and 292-314;gbkey=misc_feature;gene=hyfC;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3040590	3040658	.	+	.	ID=id4920;Note=8 probable transmembrane helices predicted for YE2800 by TMHMM2.0 at aa 10-32%2C 71-93%2C 98-120%2C 141-163%2C178-197%2C 238-257%2C 261-283 and 292-314;gbkey=misc_feature;gene=hyfC;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3040671	3040739	.	+	.	ID=id4920;Note=8 probable transmembrane helices predicted for YE2800 by TMHMM2.0 at aa 10-32%2C 71-93%2C 98-120%2C 141-163%2C178-197%2C 238-257%2C 261-283 and 292-314;gbkey=misc_feature;gene=hyfC;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3040800	3040868	.	+	.	ID=id4920;Note=8 probable transmembrane helices predicted for YE2800 by TMHMM2.0 at aa 10-32%2C 71-93%2C 98-120%2C 141-163%2C178-197%2C 238-257%2C 261-283 and 292-314;gbkey=misc_feature;gene=hyfC;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3040911	3040970	.	+	.	ID=id4920;Note=8 probable transmembrane helices predicted for YE2800 by TMHMM2.0 at aa 10-32%2C 71-93%2C 98-120%2C 141-163%2C178-197%2C 238-257%2C 261-283 and 292-314;gbkey=misc_feature;gene=hyfC;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3041091	3041150	.	+	.	ID=id4920;Note=8 probable transmembrane helices predicted for YE2800 by TMHMM2.0 at aa 10-32%2C 71-93%2C 98-120%2C 141-163%2C178-197%2C 238-257%2C 261-283 and 292-314;gbkey=misc_feature;gene=hyfC;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3041160	3041228	.	+	.	ID=id4920;Note=8 probable transmembrane helices predicted for YE2800 by TMHMM2.0 at aa 10-32%2C 71-93%2C 98-120%2C 141-163%2C178-197%2C 238-257%2C 261-283 and 292-314;gbkey=misc_feature;gene=hyfC;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3041253	3041321	.	+	.	ID=id4920;Note=8 probable transmembrane helices predicted for YE2800 by TMHMM2.0 at aa 10-32%2C 71-93%2C 98-120%2C 141-163%2C178-197%2C 238-257%2C 261-283 and 292-314;gbkey=misc_feature;gene=hyfC;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	3040986	3041027	.	+	.	ID=id4921;Note=PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2.;gbkey=misc_feature;gene=hyfC;inference=protein motif:Prosite:PS00668
AM286415.1	EMBL	gene	3041352	3042821	.	+	.	ID=gene2744;Name=hyfD;gbkey=Gene;gene=hyfD;gene_biotype=protein_coding;locus_tag=YE2801
AM286415.1	EMBL	CDS	3041352	3042821	.	+	0	ID=cds2669;Parent=gene2744;Dbxref=EnsemblGenomes-Gn:YE2801,EnsemblGenomes-Tr:CAL12834,GOA:A1JTZ2,InterPro:IPR001750,UniProtKB/TrEMBL:A1JTZ2,NCBI_GP:CAL12834.1;Name=CAL12834.1;Note=Similar to Escherichia coli hydrogenase-4 component D HyfD SWALL:HYFD_ECOLI (SWALL:P77416) (479 aa) fasta scores: E(): 1.7e-128%2C 69.39 38d in 477 aa%2C and to Thermoanaerobacter tengcongensis NADH:ubiquinone oxidoreductase subunit 5 TTE1701 SWALL:AAM24902 (EMBL:AE013124) (479 aa) fasta scores: E(): 3.4e-99%2C56.66 38d in 480 aa. CDS is extended at the N-terminus in comparison to orthologues;gbkey=CDS;gene=hyfD;inference=similar to sequence:UniProtKB:P77416;product=hydrogenase-4 component D;protein_id=CAL12834.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3041379	3041447	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3041466	3041534	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3041619	3041687	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3041724	3041792	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3041898	3041966	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3042000	3042068	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3042186	3042254	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3042273	3042341	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3042369	3042437	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3042495	3042563	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3042606	3042674	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3042756	3042815	.	+	.	ID=id4922;Note=12 probable transmembrane helices predicted for YE2801 by TMHMM2.0 at aa 10-32%2C 39-61%2C 90-112%2C 125-147%2C183-205%2C 217-239%2C 279-301%2C 308-330%2C 340-362%2C 382-404%2C419-441 and 469-488;gbkey=misc_feature;gene=hyfD;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3041775	3042662	.	+	.	ID=id4923;Note=Pfam match to entry PF00361 oxidored_q1%2CNADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 190.7%2C E-value 1.5e-54;gbkey=misc_feature;gene=hyfD;inference=protein motif:PFAM:PF00361
AM286415.1	EMBL	gene	3042833	3043498	.	+	.	ID=gene2745;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=YE2802
AM286415.1	EMBL	CDS	3042833	3043498	.	+	0	ID=cds2670;Parent=gene2745;Dbxref=EnsemblGenomes-Gn:YE2802,EnsemblGenomes-Tr:CAL12835,GOA:A1JTZ3,InterPro:IPR001133,UniProtKB/TrEMBL:A1JTZ3,NCBI_GP:CAL12835.1;Name=CAL12835.1;Note=Similar to Escherichia coli hydrogenase-4 component E HyfE SWALL:HYFE_ECOLI (SWALL:P77524) (216 aa) fasta scores: E(): 3.3e-47%2C 62.96 38d in 216 aa%2C and to Thermoanaerobacter tengcongensis hydrogenase 4 membrane subunit TTE1704 SWALL:AAM24904 (EMBL:AE013124) (204 aa) fasta scores: E(): 2.6e-34%2C 48.52 38d in 204 aa;gbkey=CDS;gene=hyfE;inference=similar to sequence:UniProtKB:P77524;product=hydrogenase-4 component E;protein_id=CAL12835.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3042860	3042919	.	+	.	ID=id4924;Note=7 probable transmembrane helices predicted for YE2802 by TMHMM2.0 at aa 10-29%2C 36-58%2C 63-82%2C 95-117%2C132-149%2C 156-178 and 182-201;gbkey=misc_feature;gene=hyfE;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	3042938	3043006	.	+	.	ID=id4924;Note=7 probable transmembrane helices predicted for YE2802 by TMHMM2.0 at aa 10-29%2C 36-58%2C 63-82%2C 95-117%2C132-149%2C 156-178 and 182-201;gbkey=misc_feature;gene=hyfE;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	3043019	3043078	.	+	.	ID=id4924;Note=7 probable transmembrane helices predicted for YE2802 by TMHMM2.0 at aa 10-29%2C 36-58%2C 63-82%2C 95-117%2C132-149%2C 156-178 and 182-201;gbkey=misc_feature;gene=hyfE;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	3043115	3043183	.	+	.	ID=id4924;Note=7 probable transmembrane helices predicted for YE2802 by TMHMM2.0 at aa 10-29%2C 36-58%2C 63-82%2C 95-117%2C132-149%2C 156-178 and 182-201;gbkey=misc_feature;gene=hyfE;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	3043226	3043279	.	+	.	ID=id4924;Note=7 probable transmembrane helices predicted for YE2802 by TMHMM2.0 at aa 10-29%2C 36-58%2C 63-82%2C 95-117%2C132-149%2C 156-178 and 182-201;gbkey=misc_feature;gene=hyfE;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	3043298	3043366	.	+	.	ID=id4924;Note=7 probable transmembrane helices predicted for YE2802 by TMHMM2.0 at aa 10-29%2C 36-58%2C 63-82%2C 95-117%2C132-149%2C 156-178 and 182-201;gbkey=misc_feature;gene=hyfE;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	3043376	3043435	.	+	.	ID=id4924;Note=7 probable transmembrane helices predicted for YE2802 by TMHMM2.0 at aa 10-29%2C 36-58%2C 63-82%2C 95-117%2C132-149%2C 156-178 and 182-201;gbkey=misc_feature;gene=hyfE;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	3043503	3045140	.	+	.	ID=gene2746;Name=hyfF;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=YE2803
AM286415.1	EMBL	CDS	3043503	3045140	.	+	0	ID=cds2671;Parent=gene2746;Dbxref=EnsemblGenomes-Gn:YE2803,EnsemblGenomes-Tr:CAL12836,GOA:A1JTZ4,InterPro:IPR001750,UniProtKB/TrEMBL:A1JTZ4,NCBI_GP:CAL12836.1;Name=CAL12836.1;Note=Similar to Escherichia coli hydrogenase-4 component F HyfF SWALL:HYFF_ECOLI (SWALL:P77437) (526 aa) fasta scores: E(): 4.3e-129%2C 67.49 38d in 523 aa%2C and to Thermoanaerobacter tengcongensis formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter%2C MnhD subunit TTE1702 SWALL:AAM24903 (EMBL:AE013124) (494 aa) fasta scores: E(): 1.3e-94%2C 52.12 38d in 495 aa. CDS is extended at the C-terminus in comparsion to the T. tengcongensis protein;gbkey=CDS;gene=hyfF;inference=similar to sequence:UniProtKB:P77437;product=hydrogenase-4 component F;protein_id=CAL12836.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3043512	3043580	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	3043614	3043682	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	3043725	3043793	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	3043827	3043895	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	3043905	3043973	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	3043992	3044060	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	3044160	3044228	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	3044265	3044333	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	3044361	3044420	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	3044469	3044537	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	3044649	3044717	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	3044754	3044822	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	3044865	3044933	.	+	.	ID=id4925;Note=13 probable transmembrane helices predicted for YE2803 by TMHMM2.0 at aa 4-26%2C 38-60%2C 75-97%2C 109-131%2C135-157%2C 164-186%2C 220-242%2C 255-277%2C 287-306%2C 323-345%2C383-405%2C 418-440 and 455-477;gbkey=misc_feature;gene=hyfF;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	sequence_feature	3043896	3044801	.	+	.	ID=id4926;Note=Pfam match to entry PF00361 oxidored_q1%2CNADH-Ubiquinone/plastoquinone (complex I)%2C various chains%2C score 177.7%2C E-value 1.2e-50;gbkey=misc_feature;gene=hyfF;inference=protein motif:PFAM:PF00361
AM286415.1	EMBL	gene	3045142	3046947	.	+	.	ID=gene2747;Name=hyfG;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=YE2804
AM286415.1	EMBL	CDS	3045142	3046947	.	+	0	ID=cds2672;Parent=gene2747;Dbxref=EnsemblGenomes-Gn:YE2804,EnsemblGenomes-Tr:CAL12837,GOA:A1JTZ5,InterPro:IPR001135,InterPro:IPR001268,InterPro:IPR001501,InterPro:IPR014029,InterPro:IPR029014,UniProtKB/TrEMBL:A1JTZ5,NCBI_GP:CAL12837.1;Name=CAL12837.1;Note=Similar to Escherichia coli hydrogenase-4 component G HyfG SWALL:HYFG_ECOLI (SWALL:P77329) (555 aa) fasta scores: E(): 1.1e-100%2C 72.58 38d in 580 aa%2C and to Escherichia coli formate hydrogenlyase subunit 5 precursor HycE or HevE SWALL:HYCE_ECOLI (SWALL:P16431) (569 aa) fasta scores: E(): 2.8e-158%2C 72.41 38d in 580 aa;gbkey=CDS;gene=hyfG;inference=similar to sequence:UniProtKB:P77329;product=hydrogenase-4 component G;protein_id=CAL12837.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3045508	3045714	.	+	.	ID=id4927;Note=Pfam match to entry PF00329 complex1_30Kd%2CRespiratory-chain NADH dehydrogenase%2C 30 Kd subunit %2Cscore 94.3%2C E-value 1.6e-25;gbkey=misc_feature;gene=hyfG;inference=protein motif:PFAM:PF00329
AM286415.1	EMBL	sequence_feature	3045883	3045918	.	+	.	ID=id4928;Note=PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature.;gbkey=misc_feature;gene=hyfG;inference=protein motif:Prosite:PS00535
AM286415.1	EMBL	sequence_feature	3045952	3046095	.	+	.	ID=id4929;Note=Pfam match to entry PF00374 NiFeSe_Hases%2CNickel-dependent hydrogenase%2C score 34.4%2C E-value 3e-11;gbkey=misc_feature;gene=hyfG;inference=protein motif:PFAM:PF00374
AM286415.1	EMBL	sequence_feature	3046120	3046848	.	+	.	ID=id4930;Note=Pfam match to entry PF00346 complex1_49Kd%2CRespiratory-chain NADH dehydrogenase%2C 49 Kd subunit %2Cscore 20.9%2C E-value 2.4e-13;gbkey=misc_feature;gene=hyfG;inference=protein motif:PFAM:PF00346
AM286415.1	EMBL	gene	3046959	3047546	.	+	.	ID=gene2748;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=YE2805
AM286415.1	EMBL	CDS	3046959	3047546	.	+	0	ID=cds2673;Parent=gene2748;Dbxref=EnsemblGenomes-Gn:YE2805,EnsemblGenomes-Tr:CAL12838,GOA:A1JTZ6,InterPro:IPR001450,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JTZ6,NCBI_GP:CAL12838.1;Name=CAL12838.1;Note=Similar to Escherichia coli formate hydrogenlyase subunit 6 HycF or HevF SWALL:HYCF_ECOLI (SWALL:P16432) (180 aa) fasta scores: E(): 1.9e-35%2C 50.57 38d in 174 aa%2Cand to Escherichia coli hydrogenase-4 component H HyfH SWALL:HYFH_ECOLI (SWALL:P77423) (181 aa) fasta scores: E(): 4.8e-37%2C 55.29 38d in 170 aa;gbkey=CDS;gene=hyfH;inference=similar to sequence:UniProtKB:P77423;product=hydrogenase-4 component H;protein_id=CAL12838.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3047055	3047126	.	+	.	ID=id4931;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 37.1%2C E-value 2.6e-08;gbkey=misc_feature;gene=hyfH;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	3047076	3047111	.	+	.	ID=id4932;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=hyfH;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	3047160	3047231	.	+	.	ID=id4933;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 34.0%2C E-value 2.2e-07;gbkey=misc_feature;gene=hyfH;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	3047181	3047216	.	+	.	ID=id4934;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=hyfH;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	3047543	3048349	.	+	.	ID=gene2749;Name=hyfI;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=YE2806
AM286415.1	EMBL	CDS	3047543	3048349	.	+	0	ID=cds2674;Parent=gene2749;Dbxref=EnsemblGenomes-Gn:YE2806,EnsemblGenomes-Tr:CAL12839,GOA:A1JTZ7,InterPro:IPR006137,InterPro:IPR006138,UniProtKB/TrEMBL:A1JTZ7,NCBI_GP:CAL12839.1;Name=CAL12839.1;Note=Similar to Escherichia coli formate hydrogenlyase subunit 7 HycG or HevG SWALL:HYCG_ECOLI (SWALL:P16433) (255 aa) fasta scores: E(): 4.7e-63%2C 64.25 38d in 249 aa%2Cand to Escherichia coli hydrogenase-4 component I HyfI SWALL:HYFI_ECOLI (SWALL:P77668) (252 aa) fasta scores: E(): 6.3e-63%2C 64.65 38d in 249 aa;gbkey=CDS;gene=hyfI;inference=similar to sequence:UniProtKB:P77668;product=hydrogenase-4 component I;protein_id=CAL12839.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3047708	3048031	.	+	.	ID=id4935;Note=Pfam match to entry PF01058 oxidored_q6%2C NADH ubiquinone oxidoreductase%2C 20 Kd subunit%2C score 165.8%2CE-value 4.8e-47;gbkey=misc_feature;gene=hyfI;inference=protein motif:PFAM:PF01058
AM286415.1	EMBL	sequence_feature	3047942	3047992	.	+	.	ID=id4936;Note=PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature.;gbkey=misc_feature;gene=hyfI;inference=protein motif:Prosite:PS01150
AM286415.1	EMBL	gene	3048342	3048743	.	+	.	ID=gene2750;Name=hyfJ;gbkey=Gene;gene=hyfJ;gene_biotype=protein_coding;locus_tag=YE2807
AM286415.1	EMBL	CDS	3048342	3048743	.	+	0	ID=cds2675;Parent=gene2750;Dbxref=EnsemblGenomes-Gn:YE2807,EnsemblGenomes-Tr:CAL12840,InterPro:IPR010005,UniProtKB/TrEMBL:A1JTZ8,NCBI_GP:CAL12840.1;Name=CAL12840.1;Note=Similar to Escherichia coli formate hydrogenlyase maturation protein HycH or HevH SWALL:HYCH_ECOLI (SWALL:P16434) (136 aa) fasta scores: E(): 3e-24%2C 54.61 id in 130 aa%2C and to Escherichia coli hydrogenase-4 component J HyfJ SWALL:HYFJ_ECOLI (SWALL:P77453) (137 aa) fasta scores: E(): 4.7e-27%2C 55.81 38d in 129 aa;gbkey=CDS;gene=hyfJ;inference=similar to sequence:UniProtKB:P77453;product=hydrogenase-4 component J;protein_id=CAL12840.1;transl_table=11
AM286415.1	EMBL	gene	3048740	3049213	.	+	.	ID=gene2751;Name=hyfK;gbkey=Gene;gene=hyfK;gene_biotype=protein_coding;locus_tag=YE2808
AM286415.1	EMBL	CDS	3048740	3049213	.	+	0	ID=cds2676;Parent=gene2751;Dbxref=EnsemblGenomes-Gn:YE2808,EnsemblGenomes-Tr:CAL12841,GOA:A1JTZ9,InterPro:IPR000671,InterPro:IPR004420,InterPro:IPR023430,UniProtKB/TrEMBL:A1JTZ9,NCBI_GP:CAL12841.1;Name=CAL12841.1;Note=Similar to Escherichia coli hydrogenase 3 maturation protease HycI SWALL:HYCI_ECOLI (SWALL:Q57451) (155 aa) fasta scores: E(): 1.8e-40%2C 71.33 38d in 150 aa%2Cand to Salmonella typhimurium protease involved in processing C-terminal end of HycE STM2845 SWALL:Q8ZMJ3 (EMBL:AE008830) (156 aa) fasta scores: E(): 7e-40%2C 70.19 id in 151 aa;gbkey=CDS;gene=hyfK;inference=similar to sequence:UniProtKB:Q57451;product=putative hydrogenase maturation protease;protein_id=CAL12841.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3048815	3049183	.	+	.	ID=id4937;Note=Pfam match to entry PF01750 HycI%2C Hydrogenase maturation protease%2C score 109.0%2C E-value 5.7e-30;gbkey=misc_feature;gene=hyfK;inference=protein motif:PFAM:PF01750
AM286415.1	EMBL	gene	3049640	3050182	.	+	.	ID=gene2752;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=YE2809
AM286415.1	EMBL	CDS	3049640	3050182	.	+	0	ID=cds2677;Parent=gene2752;Dbxref=EnsemblGenomes-Gn:YE2809,EnsemblGenomes-Tr:CAL12842,GOA:A1JU00,InterPro:IPR001450,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JU00,NCBI_GP:CAL12842.1;Name=CAL12842.1;gbkey=CDS;gene=hydN;product=4Fe-4S ferrodoxin;protein_id=CAL12842.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3049880	3049951	.	+	.	ID=id4938;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 35.3%2C E-value 9.4e-08;gbkey=misc_feature;gene=hydN;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	3049901	3049936	.	+	.	ID=id4939;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=hydN;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	3050211	3052358	.	+	.	ID=gene2753;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=YE2810
AM286415.1	EMBL	CDS	3050211	3052358	.	+	0	ID=cds2678;Parent=gene2753;Dbxref=EnsemblGenomes-Gn:YE2810,EnsemblGenomes-Tr:CAL12843,GOA:A1JU01,InterPro:IPR006478,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR027467,UniProtKB/TrEMBL:A1JU01,NCBI_GP:CAL12843.1;Name=CAL12843.1;gbkey=CDS;gene=fdhF;product=formate dehydrogenase H;protein_id=CAL12843.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3050211	3051911	.	+	.	ID=id4940;Note=Pfam match to entry PF00384 molybdopterin%2CMolybdopterin oxidoreductase%2C score 703.7%2C E-value 5.7e-209;gbkey=misc_feature;gene=fdhF;inference=protein motif:PFAM:PF00384
AM286415.1	EMBL	sequence_feature	3050226	3050279	.	+	.	ID=id4941;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1.;gbkey=misc_feature;gene=fdhF;inference=protein motif:Prosite:PS00551
AM286415.1	EMBL	sequence_feature	3051930	3052253	.	+	.	ID=id4942;Note=Pfam match to entry PF01568 Molydop_binding%2CMolydopterin dinucleotide binding domain%2C score 101.0%2CE-value 1.5e-27;gbkey=misc_feature;gene=fdhF;inference=protein motif:PFAM:PF01568
AM286415.1	EMBL	sequence_feature	3052158	3052190	.	+	.	ID=id4943;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=fdhF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3052602	3054761	.	-	.	ID=gene2754;Name=hyfR;gbkey=Gene;gene=hyfR;gene_biotype=protein_coding;locus_tag=YE2811
AM286415.1	EMBL	CDS	3052602	3054761	.	-	0	ID=cds2679;Parent=gene2754;Dbxref=EnsemblGenomes-Gn:YE2811,EnsemblGenomes-Tr:CAL12844,GOA:A1JU02,InterPro:IPR002078,InterPro:IPR003018,InterPro:IPR003593,InterPro:IPR009057,InterPro:IPR025662,InterPro:IPR025943,InterPro:IPR025944,InterPro:IPR027417,InterPro:IPR029016,UniProtKB/TrEMBL:A1JU02,NCBI_GP:CAL12844.1;Name=CAL12844.1;Note=Similar to Escherichia coli formate hydrogenlyase transcriptional activator FhlA SWALL:FHLA_ECOLI (SWALL:P19323) (692 aa) fasta scores: E(): 1.2e-111%2C51.57 38d in 698 aa%2C and to Enterobacter aerogenes formate hydrogenlyase activator protein FhlA SWALL:Q9L6V0 (EMBL:AF232732) (690 aa) fasta scores: E(): 1.3e-115%2C52.79 38d in 699 aa;gbkey=CDS;gene=hyfR;inference=similar to sequence:UniProtKB:P19323;product=putative hydrogenlyase transcriptional activator;protein_id=CAL12844.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3052647	3052778	.	-	.	ID=id4944;Note=Pfam match to entry PF02954 HTH_8%2C Bacterial regulatory protein%2C Fis family%2C score 36.8%2C E-value 3.3e-08;gbkey=misc_feature;gene=hyfR;inference=protein motif:PFAM:PF02954
AM286415.1	EMBL	sequence_feature	3052932	3052961	.	-	.	ID=id4945;Note=PS00688 Sigma-54 interaction domain C-terminal part signature.;gbkey=misc_feature;gene=hyfR;inference=protein motif:Prosite:PS00688
AM286415.1	EMBL	sequence_feature	3052935	3053600	.	-	.	ID=id4946;Note=Pfam match to entry PF00158 Sigma54_activat%2CSigma-54 interaction domain%2C score 497.7%2C E-value 5.9e-147;gbkey=misc_feature;gene=hyfR;inference=protein motif:PFAM:PF00158
AM286415.1	EMBL	sequence_feature	3053295	3053342	.	-	.	ID=id4947;Note=PS00676 Sigma-54 interaction domain ATP-binding region B signature.;gbkey=misc_feature;gene=hyfR;inference=protein motif:Prosite:PS00676
AM286415.1	EMBL	sequence_feature	3053487	3053528	.	-	.	ID=id4948;Note=PS00675 Sigma-54 interaction domain ATP-binding region A signature.;gbkey=misc_feature;gene=hyfR;inference=protein motif:Prosite:PS00675
AM286415.1	EMBL	sequence_feature	3053706	3054140	.	-	.	ID=id4949;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 56.5%2C E-value 3.9e-14;gbkey=misc_feature;gene=hyfR;inference=protein motif:PFAM:PF01590
AM286415.1	EMBL	gene	3055206	3056060	.	+	.	ID=gene2755;Name=focB;gbkey=Gene;gene=focB;gene_biotype=protein_coding;locus_tag=YE2812
AM286415.1	EMBL	CDS	3055206	3056060	.	+	0	ID=cds2680;Parent=gene2755;Dbxref=EnsemblGenomes-Gn:YE2812,EnsemblGenomes-Tr:CAL12845,GOA:A1JU03,InterPro:IPR000292,InterPro:IPR023271,InterPro:IPR023999,InterPro:IPR024002,UniProtKB/TrEMBL:A1JU03,NCBI_GP:CAL12845.1;Name=CAL12845.1;Note=Similar to Escherichia coli probable formate transporter 1 FocA SWALL:FOCA_ECOLI (SWALL:P21501) (285 aa) fasta scores: E(): 2.8e-86%2C 75.35 38d in 284 aa%2C and to Yersinia pestis putative formate transporter 1 YPO1384 SWALL:Q8ZGB9 (EMBL:AJ414148) (285 aa) fasta scores: E(): 2.6e-90%2C 80.35 38d in 280 aa;gbkey=CDS;gene=focB;inference=similar to sequence:UniProtKB:P21501;product=putative formate transporter;protein_id=CAL12845.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3055227	3056054	.	+	.	ID=id4950;Note=Pfam match to entry PF01226 Form_Nir_trans%2CFormate/nitrite transporter%2C score 528.2%2C E-value 3.7e-156;gbkey=misc_feature;gene=focB;inference=protein motif:PFAM:PF01226
AM286415.1	EMBL	sequence_feature	3055308	3055376	.	+	.	ID=id4951;Note=6 probable transmembrane helices predicted for YE2812 by TMHMM2.0 at aa 35-57%2C 77-99%2C 115-137%2C 157-179%2C192-223 and 256-278;gbkey=misc_feature;gene=focB;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3055434	3055502	.	+	.	ID=id4951;Note=6 probable transmembrane helices predicted for YE2812 by TMHMM2.0 at aa 35-57%2C 77-99%2C 115-137%2C 157-179%2C192-223 and 256-278;gbkey=misc_feature;gene=focB;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3055548	3055616	.	+	.	ID=id4951;Note=6 probable transmembrane helices predicted for YE2812 by TMHMM2.0 at aa 35-57%2C 77-99%2C 115-137%2C 157-179%2C192-223 and 256-278;gbkey=misc_feature;gene=focB;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3055674	3055742	.	+	.	ID=id4951;Note=6 probable transmembrane helices predicted for YE2812 by TMHMM2.0 at aa 35-57%2C 77-99%2C 115-137%2C 157-179%2C192-223 and 256-278;gbkey=misc_feature;gene=focB;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3055779	3055874	.	+	.	ID=id4951;Note=6 probable transmembrane helices predicted for YE2812 by TMHMM2.0 at aa 35-57%2C 77-99%2C 115-137%2C 157-179%2C192-223 and 256-278;gbkey=misc_feature;gene=focB;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3055971	3056039	.	+	.	ID=id4951;Note=6 probable transmembrane helices predicted for YE2812 by TMHMM2.0 at aa 35-57%2C 77-99%2C 115-137%2C 157-179%2C192-223 and 256-278;gbkey=misc_feature;gene=focB;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	3055452	3055481	.	+	.	ID=id4952;Note=PS01005 Formate and nitrite transporters signature 1.;gbkey=misc_feature;gene=focB;inference=protein motif:Prosite:PS01005
AM286415.1	EMBL	sequence_feature	3055707	3055739	.	+	.	ID=id4953;Note=PS01006 Formate and nitrite transporters signature 2.;gbkey=misc_feature;gene=focB;inference=protein motif:Prosite:PS01006
AM286415.1	EMBL	gene	3056171	3057181	.	-	.	ID=gene2756;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=YE2813
AM286415.1	EMBL	CDS	3056171	3057181	.	-	0	ID=cds2681;Parent=gene2756;Dbxref=EnsemblGenomes-Gn:YE2813,EnsemblGenomes-Tr:CAL12846,GOA:A1JU04,InterPro:IPR001851,UniProtKB/TrEMBL:A1JU04,NCBI_GP:CAL12846.1;Name=CAL12846.1;gbkey=CDS;gene=mglC;product=galactoside permease;protein_id=CAL12846.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3056174	3057070	.	-	.	ID=id4954;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score -14.4%2C E-value 5e-06;gbkey=misc_feature;gene=mglC;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	sequence_feature	3057092	3057148	.	-	.	ID=id4955;Note=10 probable transmembrane helices predicted for YE2813 by TMHMM2.0 at aa 12-30%2C 45-64%2C 71-90%2C 105-127%2C134-156%2C 183-202%2C 223-245%2C 260-279%2C 286-308 and 312-330;gbkey=misc_feature;gene=mglC;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	3056990	3057049	.	-	.	ID=id4955;Note=10 probable transmembrane helices predicted for YE2813 by TMHMM2.0 at aa 12-30%2C 45-64%2C 71-90%2C 105-127%2C134-156%2C 183-202%2C 223-245%2C 260-279%2C 286-308 and 312-330;gbkey=misc_feature;gene=mglC;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	3056912	3056971	.	-	.	ID=id4955;Note=10 probable transmembrane helices predicted for YE2813 by TMHMM2.0 at aa 12-30%2C 45-64%2C 71-90%2C 105-127%2C134-156%2C 183-202%2C 223-245%2C 260-279%2C 286-308 and 312-330;gbkey=misc_feature;gene=mglC;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	3056801	3056869	.	-	.	ID=id4955;Note=10 probable transmembrane helices predicted for YE2813 by TMHMM2.0 at aa 12-30%2C 45-64%2C 71-90%2C 105-127%2C134-156%2C 183-202%2C 223-245%2C 260-279%2C 286-308 and 312-330;gbkey=misc_feature;gene=mglC;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	3056714	3056782	.	-	.	ID=id4955;Note=10 probable transmembrane helices predicted for YE2813 by TMHMM2.0 at aa 12-30%2C 45-64%2C 71-90%2C 105-127%2C134-156%2C 183-202%2C 223-245%2C 260-279%2C 286-308 and 312-330;gbkey=misc_feature;gene=mglC;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	3056576	3056635	.	-	.	ID=id4955;Note=10 probable transmembrane helices predicted for YE2813 by TMHMM2.0 at aa 12-30%2C 45-64%2C 71-90%2C 105-127%2C134-156%2C 183-202%2C 223-245%2C 260-279%2C 286-308 and 312-330;gbkey=misc_feature;gene=mglC;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	3056447	3056515	.	-	.	ID=id4955;Note=10 probable transmembrane helices predicted for YE2813 by TMHMM2.0 at aa 12-30%2C 45-64%2C 71-90%2C 105-127%2C134-156%2C 183-202%2C 223-245%2C 260-279%2C 286-308 and 312-330;gbkey=misc_feature;gene=mglC;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	3056345	3056404	.	-	.	ID=id4955;Note=10 probable transmembrane helices predicted for YE2813 by TMHMM2.0 at aa 12-30%2C 45-64%2C 71-90%2C 105-127%2C134-156%2C 183-202%2C 223-245%2C 260-279%2C 286-308 and 312-330;gbkey=misc_feature;gene=mglC;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	3056258	3056326	.	-	.	ID=id4955;Note=10 probable transmembrane helices predicted for YE2813 by TMHMM2.0 at aa 12-30%2C 45-64%2C 71-90%2C 105-127%2C134-156%2C 183-202%2C 223-245%2C 260-279%2C 286-308 and 312-330;gbkey=misc_feature;gene=mglC;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3056192	3056248	.	-	.	ID=id4955;Note=10 probable transmembrane helices predicted for YE2813 by TMHMM2.0 at aa 12-30%2C 45-64%2C 71-90%2C 105-127%2C134-156%2C 183-202%2C 223-245%2C 260-279%2C 286-308 and 312-330;gbkey=misc_feature;gene=mglC;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	3057202	3058722	.	-	.	ID=gene2757;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=YE2814
AM286415.1	EMBL	CDS	3057202	3058722	.	-	0	ID=cds2682;Parent=gene2757;Dbxref=EnsemblGenomes-Gn:YE2814,EnsemblGenomes-Tr:CAL12847,GOA:A1JU05,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR015862,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JU05,NCBI_GP:CAL12847.1;Name=CAL12847.1;gbkey=CDS;gene=mglA;product=galactoside transport ATP-binding protein;protein_id=CAL12847.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3057277	3057858	.	-	.	ID=id4956;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 67.3%2C E-value 2.2e-17;gbkey=misc_feature;gene=mglA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3057460	3057504	.	-	.	ID=id4957;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=mglA;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	3058048	3058608	.	-	.	ID=id4958;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 172.8%2C E-value 3.6e-49;gbkey=misc_feature;gene=mglA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3058564	3058587	.	-	.	ID=id4959;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=mglA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3058918	3059910	.	-	.	ID=gene2758;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=YE2815
AM286415.1	EMBL	CDS	3058918	3059910	.	-	0	ID=cds2683;Parent=gene2758;Dbxref=EnsemblGenomes-Gn:YE2815,EnsemblGenomes-Tr:CAL12848,InterPro:IPR025997,InterPro:IPR028082,UniProtKB/TrEMBL:A1JU06,NCBI_GP:CAL12848.1;Name=CAL12848.1;gbkey=CDS;gene=mglB;product=galactose-binding protein;protein_id=CAL12848.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3058942	3059841	.	-	.	ID=id4960;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score -44.5%2C E-value 0.01;gbkey=misc_feature;gene=mglB;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	3060265	3061302	.	-	.	ID=gene2759;Name=galS;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=YE2816
AM286415.1	EMBL	CDS	3060265	3061302	.	-	0	ID=cds2684;Parent=gene2759;Dbxref=EnsemblGenomes-Gn:YE2816,EnsemblGenomes-Tr:CAL12849,GOA:A1JU07,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JU07,NCBI_GP:CAL12849.1;Name=CAL12849.1;Note=Similar to Escherichia coli mgl repressor and galactose ultrainduction factor GalS SWALL:GALS_ECOLI (SWALL:P25748) (346 aa) fasta scores: E(): 2.9e-90%2C 70.51 id in 329 aa%2C and to Salmonella typhimurium mgl repressor and galactose ultrainduction factor GalS SWALL:GALS_SALTY (SWALL:P41030) (340 aa) fasta scores: E(): 5e-90%2C 70.82 id in 329 aa;gbkey=CDS;gene=galS;inference=similar to sequence:UniProtKB:P41030;product=mgl repressor and galactose ultrainduction factor;protein_id=CAL12849.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3060280	3061101	.	-	.	ID=id4961;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 24.7%2C E-value 4.3e-07;gbkey=misc_feature;gene=galS;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	sequence_feature	3061195	3061278	.	-	.	ID=id4962;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 46.0%2C E-value 5.6e-11;gbkey=misc_feature;gene=galS;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	3061207	3061272	.	-	.	ID=id4963;Note=Predicted helix-turn-helix motif with score 1969.000%2C SD 5.89 at aa 11-32%2C sequence ITIRDVASRAGVSLATVSRVLN;gbkey=misc_feature;gene=galS
AM286415.1	EMBL	sequence_feature	3061210	3061266	.	-	.	ID=id4964;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=galS;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	gene	3061484	3062650	.	-	.	ID=gene2760;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=YE2817
AM286415.1	EMBL	CDS	3061484	3062650	.	-	0	ID=cds2685;Parent=gene2760;Dbxref=EnsemblGenomes-Gn:YE2817,EnsemblGenomes-Tr:CAL12850,InterPro:IPR007349,UniProtKB/TrEMBL:A1JU08,NCBI_GP:CAL12850.1;Name=CAL12850.1;gbkey=CDS;gene=yeiB;product=putative exported protein;protein_id=CAL12850.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3062546	3062614	.	-	.	ID=id4965;Note=10 probable transmembrane helices predicted for YE2817 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-123%2C130-152%2C 195-217%2C 230-252%2C 267-289%2C 310-329 and 339-361;gbkey=misc_feature;gene=yeiB;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	3062435	3062503	.	-	.	ID=id4965;Note=10 probable transmembrane helices predicted for YE2817 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-123%2C130-152%2C 195-217%2C 230-252%2C 267-289%2C 310-329 and 339-361;gbkey=misc_feature;gene=yeiB;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	3062342	3062401	.	-	.	ID=id4965;Note=10 probable transmembrane helices predicted for YE2817 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-123%2C130-152%2C 195-217%2C 230-252%2C 267-289%2C 310-329 and 339-361;gbkey=misc_feature;gene=yeiB;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	3062282	3062329	.	-	.	ID=id4965;Note=10 probable transmembrane helices predicted for YE2817 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-123%2C130-152%2C 195-217%2C 230-252%2C 267-289%2C 310-329 and 339-361;gbkey=misc_feature;gene=yeiB;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	3062195	3062263	.	-	.	ID=id4965;Note=10 probable transmembrane helices predicted for YE2817 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-123%2C130-152%2C 195-217%2C 230-252%2C 267-289%2C 310-329 and 339-361;gbkey=misc_feature;gene=yeiB;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	3062000	3062068	.	-	.	ID=id4965;Note=10 probable transmembrane helices predicted for YE2817 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-123%2C130-152%2C 195-217%2C 230-252%2C 267-289%2C 310-329 and 339-361;gbkey=misc_feature;gene=yeiB;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	3061895	3061963	.	-	.	ID=id4965;Note=10 probable transmembrane helices predicted for YE2817 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-123%2C130-152%2C 195-217%2C 230-252%2C 267-289%2C 310-329 and 339-361;gbkey=misc_feature;gene=yeiB;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	3061784	3061852	.	-	.	ID=id4965;Note=10 probable transmembrane helices predicted for YE2817 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-123%2C130-152%2C 195-217%2C 230-252%2C 267-289%2C 310-329 and 339-361;gbkey=misc_feature;gene=yeiB;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	3061664	3061723	.	-	.	ID=id4965;Note=10 probable transmembrane helices predicted for YE2817 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-123%2C130-152%2C 195-217%2C 230-252%2C 267-289%2C 310-329 and 339-361;gbkey=misc_feature;gene=yeiB;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3061568	3061636	.	-	.	ID=id4965;Note=10 probable transmembrane helices predicted for YE2817 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-103%2C 108-123%2C130-152%2C 195-217%2C 230-252%2C 267-289%2C 310-329 and 339-361;gbkey=misc_feature;gene=yeiB;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	3062705	3063367	.	-	.	ID=gene2761;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=YE2818
AM286415.1	EMBL	CDS	3062705	3063367	.	-	0	ID=cds2686;Parent=gene2761;Dbxref=EnsemblGenomes-Gn:YE2818,EnsemblGenomes-Tr:CAL12851,GOA:A1JU09,InterPro:IPR001474,InterPro:IPR018234,InterPro:IPR020602,NCBI_GP:CAL12851.1;Name=CAL12851.1;gbkey=CDS;gene=folE;product=GTP cyclohydrolase I;protein_id=CAL12851.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3062735	3063082	.	-	.	ID=id4966;Note=Pfam match to entry PF01227 GTP_cyclohydroI%2C GTP cyclohydrolase I%2C score 206.6%2C E-value 2.4e-59;gbkey=misc_feature;gene=folE;inference=protein motif:PFAM:PF01227
AM286415.1	EMBL	sequence_feature	3062906	3062938	.	-	.	ID=id4967;Note=PS00860 GTP cyclohydrolase I signature 2.;gbkey=misc_feature;gene=folE;inference=protein motif:Prosite:PS00860
AM286415.1	EMBL	sequence_feature	3063032	3063082	.	-	.	ID=id4968;Note=PS00859 GTP cyclohydrolase I signature 1.;gbkey=misc_feature;gene=folE;inference=protein motif:Prosite:PS00859
AM286415.1	EMBL	gene	3063522	3064694	.	-	.	ID=gene2762;Name=YE2819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2819
AM286415.1	EMBL	CDS	3063522	3064694	.	-	0	ID=cds2687;Parent=gene2762;Dbxref=EnsemblGenomes-Gn:YE2819,EnsemblGenomes-Tr:CAL12852,InterPro:IPR010645,InterPro:IPR016196,UniProtKB/TrEMBL:A1JU10,NCBI_GP:CAL12852.1;Name=CAL12852.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12852.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3064623	3064682	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3064521	3064580	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3064431	3064484	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3064350	3064418	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3064245	3064313	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3064158	3064217	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3064011	3064079	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3063915	3063983	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3063837	3063896	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3063768	3063827	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3063663	3063731	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3063582	3063635	.	-	.	ID=id4969;Note=12 probable transmembrane helices predicted for YE2819 by TMHMM2.0 at aa 5-24%2C 39-58%2C 71-88%2C 93-115%2C128-150%2C 160-179%2C 206-228%2C 238-260%2C 267-286%2C 290-309%2C322-344 and 354-371;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	3064831	3065700	.	+	.	ID=gene2763;Name=YE2820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2820
AM286415.1	EMBL	CDS	3064831	3065700	.	+	0	ID=cds2688;Parent=gene2763;Dbxref=EnsemblGenomes-Gn:YE2820,EnsemblGenomes-Tr:CAL12853,GOA:A1JU11,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JU11,NCBI_GP:CAL12853.1;Name=CAL12853.1;gbkey=CDS;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL12853.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3064837	3065016	.	+	.	ID=id4970;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 73.1%2C E-value 3.9e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	3064879	3064971	.	+	.	ID=id4971;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	3065080	3065691	.	+	.	ID=id4972;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 145.3%2C E-value 7.2e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	3065971	3067119	.	+	.	ID=gene2764;Name=YE2821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2821
AM286415.1	EMBL	CDS	3065971	3067119	.	+	0	ID=cds2689;Parent=gene2764;Dbxref=EnsemblGenomes-Gn:YE2821,EnsemblGenomes-Tr:CAL12854,GOA:A1JU12,InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR014183,InterPro:IPR016040,UniProtKB/TrEMBL:A1JU12,NCBI_GP:CAL12854.1;Name=CAL12854.1;gbkey=CDS;product=probable alcohol dehydrogenase;protein_id=CAL12854.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3065998	3067080	.	+	.	ID=id4973;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenase%2C score 503.5%2C E-value 1e-148;gbkey=misc_feature;inference=protein motif:PFAM:PF00107
AM286415.1	EMBL	sequence_feature	3066154	3066198	.	+	.	ID=id4974;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00059
AM286415.1	EMBL	sequence_feature	3066538	3066606	.	+	.	ID=id4975;Note=1 probable transmembrane helix predicted for YE2821 by TMHMM2.0 at aa 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3067140	3067982	.	+	.	ID=gene2765;Name=YE2822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2822
AM286415.1	EMBL	CDS	3067140	3067982	.	+	0	ID=cds2690;Parent=gene2765;Dbxref=EnsemblGenomes-Gn:YE2822,EnsemblGenomes-Tr:CAL12855,GOA:A1JU13,InterPro:IPR000801,InterPro:IPR014186,InterPro:IPR029058,UniProtKB/TrEMBL:A1JU13,NCBI_GP:CAL12855.1;Name=CAL12855.1;gbkey=CDS;product=putative esterase;protein_id=CAL12855.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3067356	3067970	.	+	.	ID=id4976;Note=Pfam match to entry PF00756 Esterase%2C Putative esterase%2C score 317.7%2C E-value 8.8e-93;gbkey=misc_feature;inference=protein motif:PFAM:PF00756
AM286415.1	EMBL	gene	3068409	3068621	.	+	.	ID=gene2766;Name=YE2822A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2822A;partial=true;start_range=.,3068409
AM286415.1	EMBL	CDS	3068409	3068621	.	+	0	ID=cds2691;Parent=gene2766;Dbxref=EnsemblGenomes-Gn:YE2822A,EnsemblGenomes-Tr:CCP19184,UniProtKB/TrEMBL:K8FC82,NCBI_GP:CCP19184.1;Name=CCP19184.1;Note=N terminus differs slightly%2C conserved in Yersinia spp.;gbkey=CDS;partial=true;product=conserved hypothetical protein;protein_id=CCP19184.1;start_range=.,3068409;transl_table=11
AM286415.1	EMBL	gene	3068765	3071137	.	+	.	ID=gene2767;Name=YE2823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2823
AM286415.1	EMBL	CDS	3068765	3071137	.	+	0	ID=cds2692;Parent=gene2767;Dbxref=EnsemblGenomes-Gn:YE2823,EnsemblGenomes-Tr:CAL12856,InterPro:IPR025857,UniProtKB/TrEMBL:A1JU14,NCBI_GP:CAL12856.1;Name=CAL12856.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12856.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3068807	3068875	.	+	.	ID=id4977;Note=9 probable transmembrane helices predicted for YE2823 by TMHMM2.0 at aa 15-37%2C 277-299%2C 329-351%2C 372-394%2C414-436%2C 667-689%2C 699-718%2C 725-747 and 762-784;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3069593	3069661	.	+	.	ID=id4977;Note=9 probable transmembrane helices predicted for YE2823 by TMHMM2.0 at aa 15-37%2C 277-299%2C 329-351%2C 372-394%2C414-436%2C 667-689%2C 699-718%2C 725-747 and 762-784;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3069749	3069817	.	+	.	ID=id4977;Note=9 probable transmembrane helices predicted for YE2823 by TMHMM2.0 at aa 15-37%2C 277-299%2C 329-351%2C 372-394%2C414-436%2C 667-689%2C 699-718%2C 725-747 and 762-784;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3069878	3069946	.	+	.	ID=id4977;Note=9 probable transmembrane helices predicted for YE2823 by TMHMM2.0 at aa 15-37%2C 277-299%2C 329-351%2C 372-394%2C414-436%2C 667-689%2C 699-718%2C 725-747 and 762-784;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3070004	3070072	.	+	.	ID=id4977;Note=9 probable transmembrane helices predicted for YE2823 by TMHMM2.0 at aa 15-37%2C 277-299%2C 329-351%2C 372-394%2C414-436%2C 667-689%2C 699-718%2C 725-747 and 762-784;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3070763	3070831	.	+	.	ID=id4977;Note=9 probable transmembrane helices predicted for YE2823 by TMHMM2.0 at aa 15-37%2C 277-299%2C 329-351%2C 372-394%2C414-436%2C 667-689%2C 699-718%2C 725-747 and 762-784;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3070859	3070918	.	+	.	ID=id4977;Note=9 probable transmembrane helices predicted for YE2823 by TMHMM2.0 at aa 15-37%2C 277-299%2C 329-351%2C 372-394%2C414-436%2C 667-689%2C 699-718%2C 725-747 and 762-784;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3070937	3071005	.	+	.	ID=id4977;Note=9 probable transmembrane helices predicted for YE2823 by TMHMM2.0 at aa 15-37%2C 277-299%2C 329-351%2C 372-394%2C414-436%2C 667-689%2C 699-718%2C 725-747 and 762-784;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3071048	3071116	.	+	.	ID=id4977;Note=9 probable transmembrane helices predicted for YE2823 by TMHMM2.0 at aa 15-37%2C 277-299%2C 329-351%2C 372-394%2C414-436%2C 667-689%2C 699-718%2C 725-747 and 762-784;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	3069581	3069952	.	+	.	ID=id4978;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score -6.2%2C E-value 0.0066;gbkey=misc_feature;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	gene	3071142	3072404	.	+	.	ID=gene2768;Name=YE2824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2824
AM286415.1	EMBL	CDS	3071142	3072404	.	+	0	ID=cds2693;Parent=gene2768;Dbxref=EnsemblGenomes-Gn:YE2824,EnsemblGenomes-Tr:CAL12857,UniProtKB/TrEMBL:A1JU15,NCBI_GP:CAL12857.1;Name=CAL12857.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12857.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3071178	3071246	.	+	.	ID=id4979;Note=1 probable transmembrane helix predicted for YE2824 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3071196	3071228	.	+	.	ID=id4980;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3072406	3073065	.	+	.	ID=gene2769;Name=YE2825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2825
AM286415.1	EMBL	CDS	3072406	3073065	.	+	0	ID=cds2694;Parent=gene2769;Dbxref=EnsemblGenomes-Gn:YE2825,EnsemblGenomes-Tr:CAL12858,GOA:A1JU16,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JU16,NCBI_GP:CAL12858.1;Name=CAL12858.1;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=CAL12858.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3072496	3073053	.	+	.	ID=id4981;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 200.1%2C E-value 2.2e-57;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3072517	3072540	.	+	.	ID=id4982;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3072829	3072873	.	+	.	ID=id4983;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	3073083	3074393	.	+	.	ID=gene2770;Name=YE2826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2826
AM286415.1	EMBL	CDS	3073083	3074393	.	+	0	ID=cds2695;Parent=gene2770;Dbxref=EnsemblGenomes-Gn:YE2826,EnsemblGenomes-Tr:CAL12859,GOA:A1JU17,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR013785,InterPro:IPR023885,UniProtKB/TrEMBL:A1JU17,NCBI_GP:CAL12859.1;Name=CAL12859.1;gbkey=CDS;product=putative heme-binding protein;protein_id=CAL12859.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3073227	3073247	.	+	.	ID=id4984;Note=PS00387 Inorganic pyrophosphatase signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00387
AM286415.1	EMBL	sequence_feature	3073344	3073361	.	+	.	ID=id4985;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	3074501	3075040	.	-	.	ID=gene2771;Name=YE2827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2827
AM286415.1	EMBL	CDS	3074501	3075040	.	-	0	ID=cds2696;Parent=gene2771;Dbxref=EnsemblGenomes-Gn:YE2827,EnsemblGenomes-Tr:CAL12860,InterPro:IPR010323,InterPro:IPR011990,UniProtKB/TrEMBL:A1JU18,NCBI_GP:CAL12860.1;Name=CAL12860.1;Note=Similar to Ralstonia solanacearum putative transmembrane protein RSC2089 or RS03654 SWALL:Q8XXM4 (EMBL:AL646068) (192 aa) fasta scores: E(): 5.3e-22%2C39.89 38d in 183 aa%2C and to the C-terminal region of Rhizobium meliloti hypothetical protein R02007 or SMC04178 SWALL:Q92NZ4 (EMBL:AL591789) (239 aa) fasta scores: E(): 1.7e-25%2C 39.77 38d in 176 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646068;product=conserved hypothetical protein;protein_id=CAL12860.1;transl_table=11
AM286415.1	EMBL	gene	3075244	3076479	.	+	.	ID=gene2772;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;gene_synonym=bisB,chlE,narE;locus_tag=YE2828
AM286415.1	EMBL	CDS	3075244	3076479	.	+	0	ID=cds2697;Parent=gene2772;Dbxref=EnsemblGenomes-Gn:YE2828,EnsemblGenomes-Tr:CAL12861,GOA:A1JU19,InterPro:IPR001453,InterPro:IPR005110,InterPro:IPR005111,InterPro:IPR008284,InterPro:IPR020817,UniProtKB/TrEMBL:A1JU19,NCBI_GP:CAL12861.1;Name=CAL12861.1;gbkey=CDS;gene=moeA;product=molybdopterin biosynthesis protein;protein_id=CAL12861.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3075268	3075753	.	+	.	ID=id4986;Note=Pfam match to entry PF03453 MoeA_N%2C MoeA N-terminal region (domain I and II)%2C score 245.0%2C E-value 6.7e-71;gbkey=misc_feature;gene=moeA;inference=protein motif:PFAM:PF03453
AM286415.1	EMBL	sequence_feature	3075778	3076191	.	+	.	ID=id4987;Note=Pfam match to entry PF00994 MoCF_biosynth%2C Probable molybdopterin binding domain%2C score 200.9%2C E-value 1.3e-57;gbkey=misc_feature;gene=moeA;inference=protein motif:PFAM:PF00994
AM286415.1	EMBL	sequence_feature	3076009	3076110	.	+	.	ID=id4988;Note=PS01079 Molybdenum cofactor biosynthesis proteins signature 2.;gbkey=misc_feature;gene=moeA;inference=protein motif:Prosite:PS01079
AM286415.1	EMBL	sequence_feature	3076243	3076464	.	+	.	ID=id4989;Note=Pfam match to entry PF03454 MoeA_C%2C MoeA C-terminal region (domain IV)%2C score 74.6%2C E-value 1.3e-19;gbkey=misc_feature;gene=moeA;inference=protein motif:PFAM:PF03454
AM286415.1	EMBL	gene	3076519	3077304	.	+	.	ID=gene2773;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;gene_synonym=chlN;locus_tag=YE2829
AM286415.1	EMBL	CDS	3076519	3077304	.	+	0	ID=cds2698;Parent=gene2773;Dbxref=EnsemblGenomes-Gn:YE2829,EnsemblGenomes-Tr:CAL12862,GOA:A1JU20,InterPro:IPR000594,InterPro:IPR007901,InterPro:IPR009036,InterPro:IPR012730,InterPro:IPR016040,UniProtKB/TrEMBL:A1JU20,NCBI_GP:CAL12862.1;Name=CAL12862.1;gbkey=CDS;gene=moeB;product=molybdopterin biosynthesis protein;protein_id=CAL12862.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3076606	3077010	.	+	.	ID=id4990;Note=Pfam match to entry PF00899 ThiF%2C ThiF family %2Cscore 182.6%2C E-value 4e-52;gbkey=misc_feature;gene=moeB;inference=protein motif:PFAM:PF00899
AM286415.1	EMBL	sequence_feature	3076618	3076650	.	+	.	ID=id4991;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=moeB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3077686	3080112	.	+	.	ID=gene2774;Name=YE2830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2830
AM286415.1	EMBL	CDS	3077686	3080112	.	+	0	ID=cds2699;Parent=gene2774;Dbxref=EnsemblGenomes-Gn:YE2830,EnsemblGenomes-Tr:CAL12863,GOA:A1JU21,InterPro:IPR003610,UniProtKB/TrEMBL:A1JU21,NCBI_GP:CAL12863.1;Name=CAL12863.1;Note=No significant database matches;gbkey=CDS;product=putative exported protein;protein_id=CAL12863.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3078568	3078597	.	+	.	ID=id4992;Note=PS00142 Neutral zinc metallopeptidases%2Czinc-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00142
AM286415.1	EMBL	sequence_feature	3079687	3079833	.	+	.	ID=id4993;Note=Pfam match to entry PF02839 CBM_5_12%2C Carbohydrate binding domain%2C score 16.1%2C E-value 0.0006;gbkey=misc_feature;inference=protein motif:PFAM:PF02839
AM286415.1	EMBL	sequence_feature	3079933	3080079	.	+	.	ID=id4994;Note=Pfam match to entry PF02839 CBM_5_12%2C Carbohydrate binding domain%2C score 5.1%2C E-value 0.016;gbkey=misc_feature;inference=protein motif:PFAM:PF02839
AM286415.1	EMBL	gene	3080223	3081818	.	-	.	ID=gene2775;Name=ybiT;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=YE2831
AM286415.1	EMBL	CDS	3080223	3081818	.	-	0	ID=cds2700;Parent=gene2775;Dbxref=EnsemblGenomes-Gn:YE2831,EnsemblGenomes-Tr:CAL12864,GOA:A1JU22,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR027417,UniProtKB/TrEMBL:A1JU22,NCBI_GP:CAL12864.1;Name=CAL12864.1;gbkey=CDS;gene=ybiT;product=ABC transporter ATP-binding protein;protein_id=CAL12864.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3080286	3080786	.	-	.	ID=id4995;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 157.0%2C E-value 2.2e-44;gbkey=misc_feature;gene=ybiT;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3080742	3080765	.	-	.	ID=id4996;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ybiT;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3081135	3081740	.	-	.	ID=id4997;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 130.4%2C E-value 2.1e-36;gbkey=misc_feature;gene=ybiT;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3081696	3081719	.	-	.	ID=id4998;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ybiT;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3081998	3083407	.	-	.	ID=gene2776;Name=YE2832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2832
AM286415.1	EMBL	CDS	3081998	3083407	.	-	0	ID=cds2701;Parent=gene2776;Dbxref=EnsemblGenomes-Gn:YE2832,EnsemblGenomes-Tr:CAL12865,GOA:A1JU23,InterPro:IPR000587,InterPro:IPR000994,InterPro:IPR028980,InterPro:IPR029149,UniProtKB/TrEMBL:A1JU23,NCBI_GP:CAL12865.1;Name=CAL12865.1;Note=No significant database matches to the full length CDS. N-terminal region is similar to Lactococcus lactis unknown protein LL1298 SWALL:Q9CG12 (EMBL:AE006362) (118 aa) fasta scores: E(): 1.8e-14%2C 45.37 38d in 108 aa%2C and the C-terminal region is similar to Lactococcus lactis unknown protein LL1299 SWALL:Q9CG11 (EMBL:AE006362) (317 aa) fasta scores: E(): 1.1e-72%2C 57.91 38d in 316 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE006362;product=hypothetical protein;protein_id=CAL12865.1;transl_table=11
AM286415.1	EMBL	gene	3083465	3084403	.	-	.	ID=gene2777;Name=YE2833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2833
AM286415.1	EMBL	CDS	3083465	3084403	.	-	0	ID=cds2702;Parent=gene2777;Dbxref=EnsemblGenomes-Gn:YE2833,EnsemblGenomes-Tr:CAL12866,GOA:A1JU24,InterPro:IPR002524,InterPro:IPR027469,UniProtKB/TrEMBL:A1JU24,NCBI_GP:CAL12866.1;Name=CAL12866.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12866.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3083468	3084340	.	-	.	ID=id4999;Note=Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family%2C score 30.9%2C E-value 4.9e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF01545
AM286415.1	EMBL	sequence_feature	3084275	3084343	.	-	.	ID=id5000;Note=6 probable transmembrane helices predicted for YE2833 by TMHMM2.0 at aa 21-43%2C 47-69%2C 90-108%2C 123-142%2C163-182 and 197-219;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3084197	3084265	.	-	.	ID=id5000;Note=6 probable transmembrane helices predicted for YE2833 by TMHMM2.0 at aa 21-43%2C 47-69%2C 90-108%2C 123-142%2C163-182 and 197-219;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3084080	3084136	.	-	.	ID=id5000;Note=6 probable transmembrane helices predicted for YE2833 by TMHMM2.0 at aa 21-43%2C 47-69%2C 90-108%2C 123-142%2C163-182 and 197-219;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3083978	3084037	.	-	.	ID=id5000;Note=6 probable transmembrane helices predicted for YE2833 by TMHMM2.0 at aa 21-43%2C 47-69%2C 90-108%2C 123-142%2C163-182 and 197-219;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3083858	3083917	.	-	.	ID=id5000;Note=6 probable transmembrane helices predicted for YE2833 by TMHMM2.0 at aa 21-43%2C 47-69%2C 90-108%2C 123-142%2C163-182 and 197-219;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3083747	3083815	.	-	.	ID=id5000;Note=6 probable transmembrane helices predicted for YE2833 by TMHMM2.0 at aa 21-43%2C 47-69%2C 90-108%2C 123-142%2C163-182 and 197-219;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	3084900	3085592	.	+	.	ID=gene2778;Name=YE2834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2834
AM286415.1	EMBL	CDS	3084900	3085592	.	+	0	ID=cds2703;Parent=gene2778;Dbxref=EnsemblGenomes-Gn:YE2834,EnsemblGenomes-Tr:CAL12867,InterPro:IPR029058,UniProtKB/TrEMBL:A1JU25,NCBI_GP:CAL12867.1;Name=CAL12867.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein PA2764 SWALL:Q9I079 (EMBL:AE004704) (231 aa) fasta scores: E(): 4.4e-38%2C 49.1 38d in 224 aa%2C and to Rhizobium loti hypothetical protein MLL2018 mll2018 SWALL:Q98JB5 (EMBL:AP002998) (233 aa) fasta scores: E(): 1.5e-31%2C43.36 38d in 226 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP002998;product=conserved hypothetical protein;protein_id=CAL12867.1;transl_table=11
AM286415.1	EMBL	gene	3085714	3086241	.	-	.	ID=gene2779;Name=ompX;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=YE2835
AM286415.1	EMBL	CDS	3085714	3086241	.	-	0	ID=cds2704;Parent=gene2779;Dbxref=EnsemblGenomes-Gn:YE2835,EnsemblGenomes-Tr:CAL12868,GOA:A1JU26,InterPro:IPR000758,InterPro:IPR011250,InterPro:IPR017690,InterPro:IPR027385,UniProtKB/TrEMBL:A1JU26,NCBI_GP:CAL12868.1;Name=CAL12868.1;gbkey=CDS;gene=ompX;product=outer membrane protein;protein_id=CAL12868.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3086077	3086103	.	-	.	ID=id5001;Note=PS00694 Enterobacterial virulence outer membrane protein signature 1.;gbkey=misc_feature;gene=ompX;inference=protein motif:Prosite:PS00694
AM286415.1	EMBL	gene	3086365	3086589	.	-	.	ID=gene2780;Name=YE2836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2836
AM286415.1	EMBL	CDS	3086365	3086589	.	-	0	ID=cds2705;Parent=gene2780;Dbxref=EnsemblGenomes-Gn:YE2836,EnsemblGenomes-Tr:CAL12869,UniProtKB/TrEMBL:A1JU27,NCBI_GP:CAL12869.1;Name=CAL12869.1;Note=Poor database matches. Similar to the C-terminal region of Bacillus halodurans hypothetical protein BH0515 SWALL:Q9KFG4 (EMBL:AP001508) (105 aa) fasta scores: E(): 9.2%2C 31.88 38d in 69 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP001508;product=hypothetical protein;protein_id=CAL12869.1;transl_table=11
AM286415.1	EMBL	gene	3086644	3087531	.	+	.	ID=gene2781;Name=YE2837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2837
AM286415.1	EMBL	CDS	3086644	3087531	.	+	0	ID=cds2706;Parent=gene2781;Dbxref=EnsemblGenomes-Gn:YE2837,EnsemblGenomes-Tr:CAL12870,GOA:A1JU28,InterPro:IPR000620,UniProtKB/TrEMBL:A1JU28,NCBI_GP:CAL12870.1;Name=CAL12870.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12870.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3086662	3086730	.	+	.	ID=id5002;Note=10 probable transmembrane helices predicted for YE2837 by TMHMM2.0 at aa 7-29%2C 39-61%2C 74-92%2C 96-118%2C125-144%2C 149-168%2C 181-203%2C 208-227%2C 240-259 and 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	3086758	3086826	.	+	.	ID=id5002;Note=10 probable transmembrane helices predicted for YE2837 by TMHMM2.0 at aa 7-29%2C 39-61%2C 74-92%2C 96-118%2C125-144%2C 149-168%2C 181-203%2C 208-227%2C 240-259 and 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	3086863	3086919	.	+	.	ID=id5002;Note=10 probable transmembrane helices predicted for YE2837 by TMHMM2.0 at aa 7-29%2C 39-61%2C 74-92%2C 96-118%2C125-144%2C 149-168%2C 181-203%2C 208-227%2C 240-259 and 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	3086929	3086997	.	+	.	ID=id5002;Note=10 probable transmembrane helices predicted for YE2837 by TMHMM2.0 at aa 7-29%2C 39-61%2C 74-92%2C 96-118%2C125-144%2C 149-168%2C 181-203%2C 208-227%2C 240-259 and 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	3087016	3087075	.	+	.	ID=id5002;Note=10 probable transmembrane helices predicted for YE2837 by TMHMM2.0 at aa 7-29%2C 39-61%2C 74-92%2C 96-118%2C125-144%2C 149-168%2C 181-203%2C 208-227%2C 240-259 and 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	3087088	3087147	.	+	.	ID=id5002;Note=10 probable transmembrane helices predicted for YE2837 by TMHMM2.0 at aa 7-29%2C 39-61%2C 74-92%2C 96-118%2C125-144%2C 149-168%2C 181-203%2C 208-227%2C 240-259 and 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	3087184	3087252	.	+	.	ID=id5002;Note=10 probable transmembrane helices predicted for YE2837 by TMHMM2.0 at aa 7-29%2C 39-61%2C 74-92%2C 96-118%2C125-144%2C 149-168%2C 181-203%2C 208-227%2C 240-259 and 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	3087265	3087324	.	+	.	ID=id5002;Note=10 probable transmembrane helices predicted for YE2837 by TMHMM2.0 at aa 7-29%2C 39-61%2C 74-92%2C 96-118%2C125-144%2C 149-168%2C 181-203%2C 208-227%2C 240-259 and 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	3087361	3087420	.	+	.	ID=id5002;Note=10 probable transmembrane helices predicted for YE2837 by TMHMM2.0 at aa 7-29%2C 39-61%2C 74-92%2C 96-118%2C125-144%2C 149-168%2C 181-203%2C 208-227%2C 240-259 and 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3087430	3087498	.	+	.	ID=id5002;Note=10 probable transmembrane helices predicted for YE2837 by TMHMM2.0 at aa 7-29%2C 39-61%2C 74-92%2C 96-118%2C125-144%2C 149-168%2C 181-203%2C 208-227%2C 240-259 and 263-285;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	3087121	3087492	.	+	.	ID=id5003;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 68.9%2C E-value 7.1e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	3087545	3088036	.	+	.	ID=gene2782;Name=YE2838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2838
AM286415.1	EMBL	CDS	3087545	3088036	.	+	0	ID=cds2707;Parent=gene2782;Dbxref=EnsemblGenomes-Gn:YE2838,EnsemblGenomes-Tr:CAL12871,GOA:A1JU29,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JU29,NCBI_GP:CAL12871.1;Name=CAL12871.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12871.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3087695	3087946	.	+	.	ID=id5004;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 56.3%2C E-value 4.5e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	3088214	3088774	.	+	.	ID=gene2783;Name=YE2839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2839
AM286415.1	EMBL	CDS	3088214	3088774	.	+	0	ID=cds2708;Parent=gene2783;Dbxref=EnsemblGenomes-Gn:YE2839,EnsemblGenomes-Tr:CAL12872,InterPro:IPR000782,UniProtKB/TrEMBL:A1JU30,NCBI_GP:CAL12872.1;Name=CAL12872.1;Note=Similar to Rhizobium loti hypothetical protein MLR4813 SWALL:Q98D87 (EMBL:AP003005) (186 aa) fasta scores: E(): 6.6e-30%2C 56.66 38d in 180 aa%2C and to the C-terminal region of Agrobacterium tumefaciens hypothetical protein ATU0472 or AGR_C_835 SWALL:Q8UI28 (EMBL:AE009017) (217 aa) fasta scores: E(): 1.8e-30%2C56.45 38d in 186 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003005;product=putative exported protein;protein_id=CAL12872.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3088325	3088768	.	+	.	ID=id5005;Note=Pfam match to entry PF02469 Fasciclin%2C Fasciclin domain%2C score 157.2%2C E-value 1.8e-44;gbkey=misc_feature;inference=protein motif:PFAM:PF02469
AM286415.1	EMBL	gene	3088834	3089388	.	+	.	ID=gene2784;Name=YE2840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2840
AM286415.1	EMBL	CDS	3088834	3089388	.	+	0	ID=cds2709;Parent=gene2784;Dbxref=EnsemblGenomes-Gn:YE2840,EnsemblGenomes-Tr:CAL12873,GOA:A1JU31,InterPro:IPR007627,InterPro:IPR011991,InterPro:IPR013249,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,UniProtKB/TrEMBL:A1JU31,NCBI_GP:CAL12873.1;Name=CAL12873.1;Note=Similar to Pseudomonas aeruginosa RNA polymerase sigma-H factor AlgU or AlgT SWALL:RPSH_PSEAE (SWALL:Q06198) (193 aa) fasta scores: E(): 2.5e-06%2C 25.14 id in 175 aa%2C and to Streptomyces coelicolor putative RNA polymerase sigma factor SCO1723 or SCI11.12c SWALL:Q9S2A7 (EMBL:AL096849) (185 aa) fasta scores: E(): 7.5e-16%2C32.36 38d in 173 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q06198;product=putative RNA polymerase sigma factor;protein_id=CAL12873.1;transl_table=11
AM286415.1	EMBL	gene	3089385	3090050	.	+	.	ID=gene2785;Name=YE2841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2841
AM286415.1	EMBL	CDS	3089385	3090050	.	+	0	ID=cds2710;Parent=gene2785;Dbxref=EnsemblGenomes-Gn:YE2841,EnsemblGenomes-Tr:CAL12874,GOA:A1JU32,InterPro:IPR018764,UniProtKB/TrEMBL:A1JU32,NCBI_GP:CAL12874.1;Name=CAL12874.1;Note=Similar to Rhizobium loti hypothetical protein MLL4823 SWALL:Q98D79 (EMBL:AP003005) (244 aa) fasta scores: E(): 5.7e-07%2C 30.7 38d in 228 aa%2C and to Rhizobium meliloti hypothetical transmembrane protein R00440 or SMC01725 SWALL:Q92SF9 (EMBL:AL591783) (237 aa) fasta scores: E(): 4.5e-05%2C 30.45 38d in 220 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003005;product=putative membrane protein;protein_id=CAL12874.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3089640	3089708	.	+	.	ID=id5006;Note=1 probable transmembrane helix predicted for YE2841 by TMHMM2.0 at aa 86-108;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3090075	3090851	.	+	.	ID=gene2786;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=YE2842
AM286415.1	EMBL	CDS	3090075	3090851	.	+	0	ID=cds2711;Parent=gene2786;Dbxref=EnsemblGenomes-Gn:YE2842,EnsemblGenomes-Tr:CAL12875,GOA:A1JU33,InterPro:IPR023149,InterPro:IPR023506,InterPro:IPR025714,InterPro:IPR029063,NCBI_GP:CAL12875.1;Name=CAL12875.1;gbkey=CDS;gene=tam;product=putative trans-aconitate methyltransferase;protein_id=CAL12875.1;transl_table=11
AM286415.1	EMBL	gene	3091166	3091675	.	+	.	ID=gene2787;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;locus_tag=YE2843
AM286415.1	EMBL	CDS	3091166	3091675	.	+	0	ID=cds2712;Parent=gene2787;Dbxref=EnsemblGenomes-Gn:YE2843,EnsemblGenomes-Tr:CAL12876,GOA:A1JU34,InterPro:IPR002177,InterPro:IPR008331,InterPro:IPR009078,InterPro:IPR012347,InterPro:IPR023067,InterPro:IPR023188,NCBI_GP:CAL12876.1;Name=CAL12876.1;gbkey=CDS;gene=dps;product=putative DNA-binding protein;protein_id=CAL12876.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3091241	3091672	.	+	.	ID=id5007;Note=Pfam match to entry PF00210 ferritin%2C Ferritin-like domain%2C score 76.1%2C E-value 4.7e-20;gbkey=misc_feature;gene=dps;inference=protein motif:PFAM:PF00210
AM286415.1	EMBL	sequence_feature	3091316	3091366	.	+	.	ID=id5008;Note=PS00818 Dps protein family signature 1.;gbkey=misc_feature;gene=dps;inference=protein motif:Prosite:PS00818
AM286415.1	EMBL	sequence_feature	3091511	3091576	.	+	.	ID=id5009;Note=Predicted helix-turn-helix motif with score 1079.000%2C SD 2.86 at aa 116-137%2C sequence DHLKELADRYGVVANFVRKAIT;gbkey=misc_feature;gene=dps
AM286415.1	EMBL	gene	3091792	3092058	.	+	.	ID=gene2788;Name=YE2844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2844
AM286415.1	EMBL	CDS	3091792	3092058	.	+	0	ID=cds2713;Parent=gene2788;Dbxref=EnsemblGenomes-Gn:YE2844,EnsemblGenomes-Tr:CAL12877,GOA:A1JU35,InterPro:IPR000962,UniProtKB/TrEMBL:A1JU35,NCBI_GP:CAL12877.1;Name=CAL12877.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein PA4870 SWALL:Q9HUU3 (EMBL:AE004900) (88 aa) fasta scores: E(): 9.8e-22%2C 65.9 38d in 88 aa%2C and to Salmonella typhimurium putative DnaK suppressor protein STM0825 SWALL:Q8ZQN5 (EMBL:AE008734) (88 aa) fasta scores: E(): 1.8e-19%2C 62.5 38d in 88 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008734;product=DksA/TraR C4-type zinc finger protein;protein_id=CAL12877.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3091792	3092004	.	+	.	ID=id5010;Note=Pfam match to entry PF01258 zf_dskA_traR%2CProkaryotic dksA/traR C4-type zinc finger%2C score 63.2%2CE-value 3.6e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF01258
AM286415.1	EMBL	gene	3092445	3093188	.	+	.	ID=gene2789;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=YE2845
AM286415.1	EMBL	CDS	3092445	3093188	.	+	0	ID=cds2714;Parent=gene2789;Dbxref=EnsemblGenomes-Gn:YE2845,EnsemblGenomes-Tr:CAL12878,GOA:A1JU36,InterPro:IPR001638,InterPro:IPR018313,UniProtKB/TrEMBL:A1JU36,NCBI_GP:CAL12878.1;Name=CAL12878.1;gbkey=CDS;gene=glnH;product=putative glutamine-binding periplasmic protein;protein_id=CAL12878.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3092523	3093176	.	+	.	ID=id5011;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 274.2%2C E-value 1.1e-79;gbkey=misc_feature;gene=glnH;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	sequence_feature	3092586	3092627	.	+	.	ID=id5012;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;gbkey=misc_feature;gene=glnH;inference=protein motif:Prosite:PS01039
AM286415.1	EMBL	gene	3093255	3093911	.	+	.	ID=gene2790;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=YE2846
AM286415.1	EMBL	CDS	3093255	3093911	.	+	0	ID=cds2715;Parent=gene2790;Dbxref=EnsemblGenomes-Gn:YE2846,EnsemblGenomes-Tr:CAL12880,GOA:A1JU37,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JU37,NCBI_GP:CAL12880.1;Name=CAL12880.1;gbkey=CDS;gene=glnP;product=putative glutamine transport system permease;protein_id=CAL12880.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3093315	3093383	.	+	.	ID=id5013;Note=4 probable transmembrane helices predicted for YE2846 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113 and 186-208;gbkey=misc_feature;gene=glnP;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3093420	3093488	.	+	.	ID=id5013;Note=4 probable transmembrane helices predicted for YE2846 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113 and 186-208;gbkey=misc_feature;gene=glnP;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3093525	3093593	.	+	.	ID=id5013;Note=4 probable transmembrane helices predicted for YE2846 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113 and 186-208;gbkey=misc_feature;gene=glnP;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3093810	3093878	.	+	.	ID=id5013;Note=4 probable transmembrane helices predicted for YE2846 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113 and 186-208;gbkey=misc_feature;gene=glnP;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3093585	3093797	.	+	.	ID=id5014;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 68.1%2C E-value 1.2e-17;gbkey=misc_feature;gene=glnP;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	3093908	3094630	.	+	.	ID=gene2791;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=YE2847
AM286415.1	EMBL	CDS	3093908	3094630	.	+	0	ID=cds2716;Parent=gene2791;Dbxref=EnsemblGenomes-Gn:YE2847,EnsemblGenomes-Tr:CAL12881,GOA:A1JU38,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JU38,NCBI_GP:CAL12881.1;Name=CAL12881.1;gbkey=CDS;gene=glnQ;product=putative glutamine transport ATP-binding protein;protein_id=CAL12881.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3093986	3094543	.	+	.	ID=id5015;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 252.0%2C E-value 5.2e-73;gbkey=misc_feature;gene=glnQ;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3094007	3094030	.	+	.	ID=id5016;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=glnQ;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3094316	3094360	.	+	.	ID=id5017;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=glnQ;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	3094913	3096145	.	-	.	ID=gene2792;Name=YE2848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2848
AM286415.1	EMBL	CDS	3094913	3096145	.	-	0	ID=cds2717;Parent=gene2792;Dbxref=EnsemblGenomes-Gn:YE2848,EnsemblGenomes-Tr:CAL12882,GOA:A1JU39,InterPro:IPR000014,InterPro:IPR000700,InterPro:IPR001610,InterPro:IPR004089,UniProtKB/TrEMBL:A1JU39,NCBI_GP:CAL12882.1;Name=CAL12882.1;gbkey=CDS;product=putative chemotactic transducer;protein_id=CAL12882.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3094928	3095551	.	-	.	ID=id5018;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 5.0%2C E-value 1.1e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	sequence_feature	3095471	3095599	.	-	.	ID=id5019;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 31.6%2C E-value 1.2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	3095837	3095965	.	-	.	ID=id5020;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 47.4%2C E-value 2.1e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	gene	3096772	3097779	.	-	.	ID=gene2793;Name=YE2849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2849
AM286415.1	EMBL	CDS	3096772	3097779	.	-	0	ID=cds2718;Parent=gene2793;Dbxref=EnsemblGenomes-Gn:YE2849,EnsemblGenomes-Tr:CAL12883,GOA:A1JU40,InterPro:IPR010286,InterPro:IPR016909,InterPro:IPR029063,NCBI_GP:CAL12883.1;Name=CAL12883.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12883.1;transl_table=11
AM286415.1	EMBL	gene	3097906	3098547	.	+	.	ID=gene2794;Name=YE2850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2850
AM286415.1	EMBL	CDS	3097906	3098547	.	+	0	ID=cds2719;Parent=gene2794;Dbxref=EnsemblGenomes-Gn:YE2850,EnsemblGenomes-Tr:CAL12884,GOA:A1JU41,InterPro:IPR002563,InterPro:IPR012349,UniProtKB/TrEMBL:A1JU41,NCBI_GP:CAL12884.1;Name=CAL12884.1;Note=Similar to Ralstonia solanacearum hypothetical protein RSC1820 or RS04248 SWALL:Q8XYD8 (EMBL:AL646066) (207 aa) fasta scores: E(): 1.6e-42%2C 53.62 38d in 207 aa%2Cand to Agrobacterium tumefaciens hypothetical protein ATU1743 or AGR_C_3198 SWALL:Q8UEL4 (EMBL:AE009130) (205 aa) fasta scores: E(): 1.7e-31%2C 47.26 38d in 201 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646066;product=conserved hypothetical protein;protein_id=CAL12884.1;transl_table=11
AM286415.1	EMBL	gene	3098674	3098934	.	+	.	ID=gene2795;Name=YE2851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2851
AM286415.1	EMBL	CDS	3098674	3098934	.	+	0	ID=cds2720;Parent=gene2795;Dbxref=EnsemblGenomes-Gn:YE2851,EnsemblGenomes-Tr:CAL12885,InterPro:IPR010854,InterPro:IPR025543,UniProtKB/TrEMBL:A1JU42,NCBI_GP:CAL12885.1;Name=CAL12885.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12885.1;transl_table=11
AM286415.1	EMBL	gene	3099086	3100948	.	-	.	ID=gene2796;Name=YE2852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2852
AM286415.1	EMBL	CDS	3099086	3100948	.	-	0	ID=cds2721;Parent=gene2796;Dbxref=EnsemblGenomes-Gn:YE2852,EnsemblGenomes-Tr:CAL12886,GOA:A1JU43,InterPro:IPR001567,InterPro:IPR024077,InterPro:IPR024079,UniProtKB/TrEMBL:A1JU43,NCBI_GP:CAL12886.1;Name=CAL12886.1;Note=Similar to Vibrio cholerae putative peptidase VC1983 SWALL:Q9KQL5 (EMBL:AE004273) (615 aa) fasta scores: E(): 2.9e-129%2C 52.95 38d in 610 aa. Internal region is similar to the C-terminal region of Escherichia coli peptidyl-dipeptidase Dcp SWALL:DCP_ECOLI (SWALL:P24171) (680 aa) fasta scores: E(): 0.072%2C 23.52 38d in 425 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P24171;product=putative peptidase;protein_id=CAL12886.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3099287	3100492	.	-	.	ID=id5021;Note=Pfam match to entry PF01432 Peptidase_M3%2C Peptidase family M3%2C score -48.9%2C E-value 7.7e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF01432
AM286415.1	EMBL	gene	3101167	3102147	.	-	.	ID=gene2797;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=YE2853
AM286415.1	EMBL	CDS	3101167	3102147	.	-	0	ID=cds2722;Parent=gene2797;Dbxref=EnsemblGenomes-Gn:YE2853,EnsemblGenomes-Tr:CAL12887,GOA:A1JU44,InterPro:IPR000312,InterPro:IPR017459,UniProtKB/TrEMBL:A1JU44,NCBI_GP:CAL12887.1;Name=CAL12887.1;gbkey=CDS;gene=ybiB;product=putative glycosyl transferase;protein_id=CAL12887.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3101182	3101919	.	-	.	ID=id5022;Note=Pfam match to entry PF00591 Glycos_transf_3%2CGlycosyl transferase family%2C a/b domain%2C score 25.1%2CE-value 1.1e-11;gbkey=misc_feature;gene=ybiB;inference=protein motif:PFAM:PF00591
AM286415.1	EMBL	sequence_feature	3101935	3102147	.	-	.	ID=id5023;Note=Pfam match to entry PF02885 Glycos_trans_3N%2CGlycosyl transferase family%2C helical bundle domain%2C score 66.9%2C E-value 2.7e-17;gbkey=misc_feature;gene=ybiB;inference=protein motif:PFAM:PF02885
AM286415.1	EMBL	gene	3102357	3103061	.	-	.	ID=gene2798;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;gene_synonym=bniP;locus_tag=YE2854
AM286415.1	EMBL	CDS	3102357	3103061	.	-	0	ID=cds2723;Parent=gene2798;Dbxref=EnsemblGenomes-Gn:YE2854,EnsemblGenomes-Tr:CAL12888,GOA:A1JU45,InterPro:IPR000425,InterPro:IPR022357,InterPro:IPR023271,InterPro:IPR023743,UniProtKB/TrEMBL:A1JU45,NCBI_GP:CAL12888.1;Name=CAL12888.1;Note=Similar to Escherichia coli aquaporin Z AqpZ or BniP SWALL:AQPZ_ECOLI (SWALL:P48838) (231 aa) fasta scores: E(): 6.9e-55%2C 68.44 38d in 225 aa%2C and to Pseudomonas aeruginosa aquaporin Z PA4034 SWALL:Q9HWZ3 (EMBL:AE004820) (229 aa) fasta scores: E(): 3.5e-56%2C70.08 38d in 224 aa;gbkey=CDS;gene=aqpZ;inference=similar to sequence:UniProtKB:P48838;product=aquaporin Z;protein_id=CAL12888.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3102924	3103028	.	-	.	ID=id5024;Note=6 probable transmembrane helices predicted for YE2854 by TMHMM2.0 at aa 12-46%2C 51-73%2C 80-102%2C 127-149%2C156-178 and 203-225;gbkey=misc_feature;gene=aqpZ;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3102843	3102911	.	-	.	ID=id5024;Note=6 probable transmembrane helices predicted for YE2854 by TMHMM2.0 at aa 12-46%2C 51-73%2C 80-102%2C 127-149%2C156-178 and 203-225;gbkey=misc_feature;gene=aqpZ;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3102756	3102824	.	-	.	ID=id5024;Note=6 probable transmembrane helices predicted for YE2854 by TMHMM2.0 at aa 12-46%2C 51-73%2C 80-102%2C 127-149%2C156-178 and 203-225;gbkey=misc_feature;gene=aqpZ;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3102615	3102683	.	-	.	ID=id5024;Note=6 probable transmembrane helices predicted for YE2854 by TMHMM2.0 at aa 12-46%2C 51-73%2C 80-102%2C 127-149%2C156-178 and 203-225;gbkey=misc_feature;gene=aqpZ;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3102528	3102596	.	-	.	ID=id5024;Note=6 probable transmembrane helices predicted for YE2854 by TMHMM2.0 at aa 12-46%2C 51-73%2C 80-102%2C 127-149%2C156-178 and 203-225;gbkey=misc_feature;gene=aqpZ;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3102387	3102455	.	-	.	ID=id5024;Note=6 probable transmembrane helices predicted for YE2854 by TMHMM2.0 at aa 12-46%2C 51-73%2C 80-102%2C 127-149%2C156-178 and 203-225;gbkey=misc_feature;gene=aqpZ;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	3102399	3103061	.	-	.	ID=id5025;Note=Pfam match to entry PF00230 MIP%2C Major intrinsic protein%2C score 182.3%2C E-value 5.2e-52;gbkey=misc_feature;gene=aqpZ;inference=protein motif:PFAM:PF00230
AM286415.1	EMBL	sequence_feature	3102858	3102884	.	-	.	ID=id5026;Note=PS00221 MIP family signature.;gbkey=misc_feature;gene=aqpZ;inference=protein motif:Prosite:PS00221
AM286415.1	EMBL	gene	3103372	3105555	.	-	.	ID=gene2799;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;gene_synonym=rarB;locus_tag=YE2855
AM286415.1	EMBL	CDS	3103372	3105555	.	-	0	ID=cds2724;Parent=gene2799;Dbxref=EnsemblGenomes-Gn:YE2855,EnsemblGenomes-Tr:CAL12889,GOA:A1JU46,InterPro:IPR006555,InterPro:IPR010614,InterPro:IPR014001,InterPro:IPR014013,InterPro:IPR027417,UniProtKB/TrEMBL:A1JU46,NCBI_GP:CAL12889.1;Name=CAL12889.1;gbkey=CDS;gene=dinG;product=putative ATP-dependent helicase DinG;protein_id=CAL12889.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3105373	3105396	.	-	.	ID=id5027;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=dinG;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3105995	3107110	.	+	.	ID=gene2800;Name=ompC2;gbkey=Gene;gene=ompC2;gene_biotype=protein_coding;locus_tag=YE2856
AM286415.1	EMBL	CDS	3105995	3107110	.	+	0	ID=cds2725;Parent=gene2800;Dbxref=EnsemblGenomes-Gn:YE2856,EnsemblGenomes-Tr:CAL12890,GOA:A1JU47,InterPro:IPR001702,InterPro:IPR001897,InterPro:IPR013793,InterPro:IPR023614,UniProtKB/TrEMBL:A1JU47,NCBI_GP:CAL12890.1;Name=CAL12890.1;gbkey=CDS;gene=ompC2;product=outer membrane protein C2;protein_id=CAL12890.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3106073	3107107	.	+	.	ID=id5028;Note=Pfam match to entry PF00267 Gram-ve_porins%2CGram-negative porin%2C score 647.2%2C E-value 5.7e-192;gbkey=misc_feature;gene=ompC2;inference=protein motif:PFAM:PF00267
AM286415.1	EMBL	sequence_feature	3106970	3107020	.	+	.	ID=id5029;Note=PS00576 General diffusion Gram-negative porins signature.;gbkey=misc_feature;gene=ompC2;inference=protein motif:Prosite:PS00576
AM286415.1	EMBL	gene	3107234	3108544	.	-	.	ID=gene2801;Name=YE2857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2857
AM286415.1	EMBL	CDS	3107234	3108544	.	-	0	ID=cds2726;Parent=gene2801;Dbxref=EnsemblGenomes-Gn:YE2857,EnsemblGenomes-Tr:CAL12892,GOA:A1JU48,InterPro:IPR008397,InterPro:IPR008929,UniProtKB/TrEMBL:A1JU48,NCBI_GP:CAL12892.1;Name=CAL12892.1;Note=Similar to Yersinia pestis putative exported protein YPO3473 SWALL:Q8ZBE3 (EMBL:AJ414157) (408 aa) fasta scores: E(): 2.5e-43%2C 33.67 38d in 392 aa. C-terminal region is similar to Yersinia pestis hypothetical protein YPO3468 SWALL:Q8ZBE8 (EMBL:AJ414157) (388 aa) fasta scores: E(): 1.2e-44%2C 36.03 38d in 358 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414157;product=putative exported protein;protein_id=CAL12892.1;transl_table=11
AM286415.1	EMBL	gene	3108825	3109715	.	+	.	ID=gene2802;Name=YE2858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2858
AM286415.1	EMBL	CDS	3108825	3109715	.	+	0	ID=cds2727;Parent=gene2802;Dbxref=EnsemblGenomes-Gn:YE2858,EnsemblGenomes-Tr:CAL12895,GOA:A1JU49,InterPro:IPR000620,UniProtKB/TrEMBL:A1JU49,NCBI_GP:CAL12895.1;Name=CAL12895.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12895.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3108849	3108908	.	+	.	ID=id5030;Note=10 probable transmembrane helices predicted for YE2858 by TMHMM2.0 at aa 9-28%2C 43-65%2C 72-91%2C 101-120%2C127-149%2C 153-172%2C 179-201%2C 214-236%2C 243-265 and 275-293;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	3108951	3109019	.	+	.	ID=id5030;Note=10 probable transmembrane helices predicted for YE2858 by TMHMM2.0 at aa 9-28%2C 43-65%2C 72-91%2C 101-120%2C127-149%2C 153-172%2C 179-201%2C 214-236%2C 243-265 and 275-293;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	3109038	3109097	.	+	.	ID=id5030;Note=10 probable transmembrane helices predicted for YE2858 by TMHMM2.0 at aa 9-28%2C 43-65%2C 72-91%2C 101-120%2C127-149%2C 153-172%2C 179-201%2C 214-236%2C 243-265 and 275-293;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	3109125	3109184	.	+	.	ID=id5030;Note=10 probable transmembrane helices predicted for YE2858 by TMHMM2.0 at aa 9-28%2C 43-65%2C 72-91%2C 101-120%2C127-149%2C 153-172%2C 179-201%2C 214-236%2C 243-265 and 275-293;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	3109203	3109271	.	+	.	ID=id5030;Note=10 probable transmembrane helices predicted for YE2858 by TMHMM2.0 at aa 9-28%2C 43-65%2C 72-91%2C 101-120%2C127-149%2C 153-172%2C 179-201%2C 214-236%2C 243-265 and 275-293;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	3109281	3109340	.	+	.	ID=id5030;Note=10 probable transmembrane helices predicted for YE2858 by TMHMM2.0 at aa 9-28%2C 43-65%2C 72-91%2C 101-120%2C127-149%2C 153-172%2C 179-201%2C 214-236%2C 243-265 and 275-293;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	3109359	3109427	.	+	.	ID=id5030;Note=10 probable transmembrane helices predicted for YE2858 by TMHMM2.0 at aa 9-28%2C 43-65%2C 72-91%2C 101-120%2C127-149%2C 153-172%2C 179-201%2C 214-236%2C 243-265 and 275-293;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	3109464	3109532	.	+	.	ID=id5030;Note=10 probable transmembrane helices predicted for YE2858 by TMHMM2.0 at aa 9-28%2C 43-65%2C 72-91%2C 101-120%2C127-149%2C 153-172%2C 179-201%2C 214-236%2C 243-265 and 275-293;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	3109551	3109619	.	+	.	ID=id5030;Note=10 probable transmembrane helices predicted for YE2858 by TMHMM2.0 at aa 9-28%2C 43-65%2C 72-91%2C 101-120%2C127-149%2C 153-172%2C 179-201%2C 214-236%2C 243-265 and 275-293;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3109647	3109703	.	+	.	ID=id5030;Note=10 probable transmembrane helices predicted for YE2858 by TMHMM2.0 at aa 9-28%2C 43-65%2C 72-91%2C 101-120%2C127-149%2C 153-172%2C 179-201%2C 214-236%2C 243-265 and 275-293;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	3108885	3109256	.	+	.	ID=id5031;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 93.4%2C E-value 2.9e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	3109311	3109688	.	+	.	ID=id5032;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 69.7%2C E-value 4.1e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	3109970	3110884	.	-	.	ID=gene2803;Name=YE2859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2859
AM286415.1	EMBL	CDS	3109970	3110884	.	-	0	ID=cds2728;Parent=gene2803;Dbxref=EnsemblGenomes-Gn:YE2859,EnsemblGenomes-Tr:CAL12898,GOA:A1JU50,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JU50,NCBI_GP:CAL12898.1;Name=CAL12898.1;Note=Similar to Pseudomonas aeruginosa probable transcriptional regulator PA3565 SWALL:Q9HY52 (EMBL:AE004777) (306 aa) fasta scores: E(): 7.8e-59%2C52.72 38d in 294 aa%2C and to Vibrio cholerae LysR family transcriptional regulator VCA0635 SWALL:Q9KLV6 (EMBL:AE004393) (313 aa) fasta scores: E(): 3.5e-42%2C40.74 38d in 297 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004777;product=LysR family transcription regulatory protein;protein_id=CAL12898.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3110000	3110626	.	-	.	ID=id5033;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 155.6%2C E-value 5.4e-44;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	3110696	3110875	.	-	.	ID=id5034;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 81.0%2C E-value 1.6e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	3110741	3110833	.	-	.	ID=id5035;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	3110771	3110836	.	-	.	ID=id5036;Note=Predicted helix-turn-helix motif with score 1707.000%2C SD 5.00 at aa 17-38%2C sequence GSLSEAARRLNITPAAASIAVK;gbkey=misc_feature
AM286415.1	EMBL	gene	3110994	3111740	.	+	.	ID=gene2804;Name=YE2860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2860
AM286415.1	EMBL	CDS	3110994	3111740	.	+	0	ID=cds2729;Parent=gene2804;Dbxref=EnsemblGenomes-Gn:YE2860,EnsemblGenomes-Tr:CAL12899,InterPro:IPR002347,InterPro:IPR016040,UniProtKB/TrEMBL:A1JU51,NCBI_GP:CAL12899.1;Name=CAL12899.1;Note=Similar to Rhizobium loti probable acyl-carrier protein reductase MLR2047 SWALL:Q98J89 (EMBL:AP002998) (242 aa) fasta scores: E(): 7.9e-23%2C 38.81 38d in 237 aa%2Cand to Rhizobium leguminosarum putative short-chain dehydrogenase SWALL:Q93E09 (EMBL:AF372655) (245 aa) fasta scores: E(): 5.3e-20%2C 36.05 38d in 233 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP002998;product=putative short chain dehydrogenase;protein_id=CAL12899.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3111039	3111731	.	+	.	ID=id5037;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 79.3%2C E-value 5.2e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	gene	3111996	3112799	.	-	.	ID=gene2805;Name=YE2861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2861
AM286415.1	EMBL	CDS	3111996	3112799	.	-	0	ID=cds2730;Parent=gene2805;Dbxref=EnsemblGenomes-Gn:YE2861,EnsemblGenomes-Tr:CAL12900,UniProtKB/TrEMBL:A1JU52,NCBI_GP:CAL12900.1;Name=CAL12900.1;Note=Poor database matches. C-terminus is similar to the C-terminal region of Pseudomonas aeruginosa hypothetical protein PA101 SWALL:Q9HU82 (EMBL:AE004923) (265 aa) fasta scores: E(): 9.9e-23%2C 35.45 38d in 220 aa. N-terminus is similar to the C-terminal region of Rhizobium loti hypothetical protein MLL1215 SWALL:Q98L21 (EMBL:AP002996) (275 aa) fasta scores: E(): 2.3e-07%2C 35 38d in 240 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP002996;product=hypothetical protein;protein_id=CAL12900.1;transl_table=11
AM286415.1	EMBL	gene	3112831	3113559	.	-	.	ID=gene2806;Name=YE2862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2862
AM286415.1	EMBL	CDS	3112831	3113559	.	-	0	ID=cds2731;Parent=gene2806;Dbxref=EnsemblGenomes-Gn:YE2862,EnsemblGenomes-Tr:CAL12901,GOA:A1JU53,InterPro:IPR000515,UniProtKB/TrEMBL:A1JU53,NCBI_GP:CAL12901.1;Name=CAL12901.1;gbkey=CDS;product=putative ABC transport integral membrane subunit;protein_id=CAL12901.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3113497	3113556	.	-	.	ID=id5038;Note=6 probable transmembrane helices predicted for YE2862 by TMHMM2.0 at aa 2-21%2C 36-58%2C 79-101%2C 106-128%2C148-170 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3113386	3113454	.	-	.	ID=id5038;Note=6 probable transmembrane helices predicted for YE2862 by TMHMM2.0 at aa 2-21%2C 36-58%2C 79-101%2C 106-128%2C148-170 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3113257	3113325	.	-	.	ID=id5038;Note=6 probable transmembrane helices predicted for YE2862 by TMHMM2.0 at aa 2-21%2C 36-58%2C 79-101%2C 106-128%2C148-170 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3113176	3113244	.	-	.	ID=id5038;Note=6 probable transmembrane helices predicted for YE2862 by TMHMM2.0 at aa 2-21%2C 36-58%2C 79-101%2C 106-128%2C148-170 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3113050	3113118	.	-	.	ID=id5038;Note=6 probable transmembrane helices predicted for YE2862 by TMHMM2.0 at aa 2-21%2C 36-58%2C 79-101%2C 106-128%2C148-170 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3112924	3112992	.	-	.	ID=id5038;Note=6 probable transmembrane helices predicted for YE2862 by TMHMM2.0 at aa 2-21%2C 36-58%2C 79-101%2C 106-128%2C148-170 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	3112957	3113187	.	-	.	ID=id5039;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 77.3%2C E-value 2e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	3113098	3113184	.	-	.	ID=id5040;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	3113658	3114602	.	-	.	ID=gene2807;Name=YE2863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2863
AM286415.1	EMBL	CDS	3113658	3114602	.	-	0	ID=cds2732;Parent=gene2807;Dbxref=EnsemblGenomes-Gn:YE2863,EnsemblGenomes-Tr:CAL12902,GOA:A1JU54,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JU54,NCBI_GP:CAL12902.1;Name=CAL12902.1;gbkey=CDS;product=putative ABC transport ATP-binding subunit;protein_id=CAL12902.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3113673	3113798	.	-	.	ID=id5041;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 19.5%2C E-value 8.9e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	3113967	3114524	.	-	.	ID=id5042;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 223.5%2C E-value 2e-64;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3114153	3114197	.	-	.	ID=id5043;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	3114258	3114287	.	-	.	ID=id5044;Note=PS00215 Mitochondrial energy transfer proteins signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00215
AM286415.1	EMBL	sequence_feature	3114480	3114503	.	-	.	ID=id5045;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3114599	3115753	.	-	.	ID=gene2808;Name=YE2864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2864
AM286415.1	EMBL	CDS	3114599	3115753	.	-	0	ID=cds2733;Parent=gene2808;Dbxref=EnsemblGenomes-Gn:YE2864,EnsemblGenomes-Tr:CAL12903,GOA:A1JU55,InterPro:IPR000515,UniProtKB/TrEMBL:A1JU55,NCBI_GP:CAL12903.1;Name=CAL12903.1;gbkey=CDS;product=putative ABC transport integral membrane subunit;protein_id=CAL12903.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3115679	3115735	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	3115568	3115636	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	3115481	3115549	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	3115370	3115438	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	3115283	3115351	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	3115145	3115213	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	3115058	3115126	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	3114941	3115000	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	3114791	3114859	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	3114713	3114781	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	3114626	3114694	.	-	.	ID=id5046;Note=11 probable transmembrane helices predicted for YE2864 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-91%2C 106-128%2C135-157%2C 181-203%2C 210-232%2C 252-271%2C 299-321%2C 325-347 and 354-376;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	3114713	3114925	.	-	.	ID=id5047;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 58.7%2C E-value 8.3e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	3114836	3114922	.	-	.	ID=id5048;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	3115862	3116794	.	-	.	ID=gene2809;Name=YE2865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2865
AM286415.1	EMBL	CDS	3115862	3116794	.	-	0	ID=cds2734;Parent=gene2809;Dbxref=EnsemblGenomes-Gn:YE2865,EnsemblGenomes-Tr:CAL12904,GOA:A1JU56,InterPro:IPR007210,UniProtKB/TrEMBL:A1JU56,NCBI_GP:CAL12904.1;Name=CAL12904.1;gbkey=CDS;product=putative substrate-binding transport protein;protein_id=CAL12904.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3116747	3116794	.	-	.	ID=id5049;Note=PS00063 Aldo/keto reductase family putative active site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00063
AM286415.1	EMBL	gene	3117162	3118220	.	-	.	ID=gene2810;Name=YE2866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2866
AM286415.1	EMBL	CDS	3117162	3118220	.	-	0	ID=cds2735;Parent=gene2810;Dbxref=EnsemblGenomes-Gn:YE2866,EnsemblGenomes-Tr:CAL12905,GOA:A1JU57,InterPro:IPR005804,UniProtKB/TrEMBL:A1JU57,NCBI_GP:CAL12905.1;Name=CAL12905.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein PA5102 SWALL:Q9HU81 (EMBL:AE004923) (312 aa) fasta scores: E(): 1e-50%2C 44.9 38d in 314 aa%2C and to Rhizobium loti hypothetical protein MLL1216 mll1216 SWALL:Q98L20 (EMBL:AP002996) (340 aa) fasta scores: E(): 8.6e-30%2C32.48 38d in 314 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP002996;product=putative fatty acid desaturase;protein_id=CAL12905.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3117339	3118016	.	-	.	ID=id5050;Note=Pfam match to entry PF00487 FA_desaturase%2C Fatty acid desaturase%2C score 12.5%2C E-value 1.2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00487
AM286415.1	EMBL	sequence_feature	3118056	3118124	.	-	.	ID=id5051;Note=3 probable transmembrane helices predicted for YE2866 by TMHMM2.0 at aa 33-55%2C 60-82 and 202-224;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3117975	3118043	.	-	.	ID=id5051;Note=3 probable transmembrane helices predicted for YE2866 by TMHMM2.0 at aa 33-55%2C 60-82 and 202-224;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3117549	3117617	.	-	.	ID=id5051;Note=3 probable transmembrane helices predicted for YE2866 by TMHMM2.0 at aa 33-55%2C 60-82 and 202-224;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3118377	3119507	.	-	.	ID=gene2811;Name=YE2867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2867
AM286415.1	EMBL	CDS	3118377	3119507	.	-	0	ID=cds2736;Parent=gene2811;Dbxref=EnsemblGenomes-Gn:YE2867,EnsemblGenomes-Tr:CAL12906,GOA:A1JU58,InterPro:IPR000683,InterPro:IPR004104,InterPro:IPR016040,UniProtKB/TrEMBL:A1JU58,NCBI_GP:CAL12906.1;Name=CAL12906.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12906.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3118698	3119084	.	-	.	ID=id5052;Note=Pfam match to entry PF02894 GFO_IDH_MocA_C%2COxidoreductase family%2C C-terminal alpha/beta domain %2Cscore 40.5%2C E-value 2.5e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF02894
AM286415.1	EMBL	sequence_feature	3119118	3119498	.	-	.	ID=id5053;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2COxidoreductase family%2C NAD-binding Rossmann fold%2C score 129.9%2C E-value 3.1e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF01408
AM286415.1	EMBL	gene	3119899	3120753	.	+	.	ID=gene2812;Name=YE2868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2868
AM286415.1	EMBL	CDS	3119899	3120753	.	+	0	ID=cds2737;Parent=gene2812;Dbxref=EnsemblGenomes-Gn:YE2868,EnsemblGenomes-Tr:CAL12907,GOA:A1JU59,InterPro:IPR001307,InterPro:IPR001763,UniProtKB/TrEMBL:A1JU59,NCBI_GP:CAL12907.1;Name=CAL12907.1;gbkey=CDS;product=putative sulfurtransferase;protein_id=CAL12907.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3119920	3120288	.	+	.	ID=id5054;Note=Pfam match to entry PF00581 Rhodanese%2CRhodanese-like domain%2C score 101.9%2C E-value 8.2e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00581
AM286415.1	EMBL	sequence_feature	3120025	3120060	.	+	.	ID=id5055;Note=PS00380 Rhodanese signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00380
AM286415.1	EMBL	sequence_feature	3120370	3120717	.	+	.	ID=id5056;Note=Pfam match to entry PF00581 Rhodanese%2CRhodanese-like domain%2C score 62.3%2C E-value 7e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00581
AM286415.1	EMBL	gene	3120760	3121458	.	-	.	ID=gene2813;Name=YE2869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2869
AM286415.1	EMBL	CDS	3120760	3121458	.	-	0	ID=cds2738;Parent=gene2813;Dbxref=EnsemblGenomes-Gn:YE2869,EnsemblGenomes-Tr:CAL12908,GOA:A1JU60,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017780,InterPro:IPR027417,UniProtKB/TrEMBL:A1JU60,NCBI_GP:CAL12908.1;Name=CAL12908.1;gbkey=CDS;product=putative ABC transport ATP-binding subunit;protein_id=CAL12908.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3120829	3121380	.	-	.	ID=id5057;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 168.5%2C E-value 7.1e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3121336	3121359	.	-	.	ID=id5058;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3121586	3122422	.	-	.	ID=gene2814;Name=YE2870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2870
AM286415.1	EMBL	CDS	3121586	3122422	.	-	0	ID=cds2739;Parent=gene2814;Dbxref=EnsemblGenomes-Gn:YE2870,EnsemblGenomes-Tr:CAL12909,GOA:A1JTN3,InterPro:IPR003439,InterPro:IPR017781,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTN3,NCBI_GP:CAL12909.1;Name=CAL12909.1;gbkey=CDS;product=putative ABC transport ATP-binding subunit;protein_id=CAL12909.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3121661	3122236	.	-	.	ID=id5059;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 161.5%2C E-value 9e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3122192	3122215	.	-	.	ID=id5060;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3122419	3123495	.	-	.	ID=gene2815;Name=YE2871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2871
AM286415.1	EMBL	CDS	3122419	3123495	.	-	0	ID=cds2740;Parent=gene2815;Dbxref=EnsemblGenomes-Gn:YE2871,EnsemblGenomes-Tr:CAL12910,GOA:A1JTN4,InterPro:IPR001851,InterPro:IPR017778,UniProtKB/TrEMBL:A1JTN4,NCBI_GP:CAL12910.1;Name=CAL12910.1;gbkey=CDS;product=putative Branched-chain amino acid transport system%2C permease component;protein_id=CAL12910.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3122437	3123363	.	-	.	ID=id5061;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score 100.7%2C E-value 1.8e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	sequence_feature	3123379	3123447	.	-	.	ID=id5062;Note=10 probable transmembrane helices predicted for YE2871 by TMHMM2.0 at aa 17-39%2C 44-66%2C 73-95%2C 126-148%2C155-174%2C 178-197%2C 204-226%2C 257-279%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	3123298	3123366	.	-	.	ID=id5062;Note=10 probable transmembrane helices predicted for YE2871 by TMHMM2.0 at aa 17-39%2C 44-66%2C 73-95%2C 126-148%2C155-174%2C 178-197%2C 204-226%2C 257-279%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	3123211	3123279	.	-	.	ID=id5062;Note=10 probable transmembrane helices predicted for YE2871 by TMHMM2.0 at aa 17-39%2C 44-66%2C 73-95%2C 126-148%2C155-174%2C 178-197%2C 204-226%2C 257-279%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	3123052	3123120	.	-	.	ID=id5062;Note=10 probable transmembrane helices predicted for YE2871 by TMHMM2.0 at aa 17-39%2C 44-66%2C 73-95%2C 126-148%2C155-174%2C 178-197%2C 204-226%2C 257-279%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	3122974	3123033	.	-	.	ID=id5062;Note=10 probable transmembrane helices predicted for YE2871 by TMHMM2.0 at aa 17-39%2C 44-66%2C 73-95%2C 126-148%2C155-174%2C 178-197%2C 204-226%2C 257-279%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	3122905	3122964	.	-	.	ID=id5062;Note=10 probable transmembrane helices predicted for YE2871 by TMHMM2.0 at aa 17-39%2C 44-66%2C 73-95%2C 126-148%2C155-174%2C 178-197%2C 204-226%2C 257-279%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	3122818	3122886	.	-	.	ID=id5062;Note=10 probable transmembrane helices predicted for YE2871 by TMHMM2.0 at aa 17-39%2C 44-66%2C 73-95%2C 126-148%2C155-174%2C 178-197%2C 204-226%2C 257-279%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	3122659	3122727	.	-	.	ID=id5062;Note=10 probable transmembrane helices predicted for YE2871 by TMHMM2.0 at aa 17-39%2C 44-66%2C 73-95%2C 126-148%2C155-174%2C 178-197%2C 204-226%2C 257-279%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	3122554	3122622	.	-	.	ID=id5062;Note=10 probable transmembrane helices predicted for YE2871 by TMHMM2.0 at aa 17-39%2C 44-66%2C 73-95%2C 126-148%2C155-174%2C 178-197%2C 204-226%2C 257-279%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3122443	3122511	.	-	.	ID=id5062;Note=10 probable transmembrane helices predicted for YE2871 by TMHMM2.0 at aa 17-39%2C 44-66%2C 73-95%2C 126-148%2C155-174%2C 178-197%2C 204-226%2C 257-279%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	3123495	3125096	.	-	.	ID=gene2816;Name=YE2872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2872
AM286415.1	EMBL	CDS	3123495	3125096	.	-	0	ID=cds2741;Parent=gene2816;Dbxref=EnsemblGenomes-Gn:YE2872,EnsemblGenomes-Tr:CAL12911,GOA:A1JTN5,InterPro:IPR001851,InterPro:IPR011989,InterPro:IPR016024,InterPro:IPR017779,UniProtKB/TrEMBL:A1JTN5,NCBI_GP:CAL12911.1;Name=CAL12911.1;gbkey=CDS;product=putative Branched-chain amino acid transport system%2C permease component;protein_id=CAL12911.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3123510	3124388	.	-	.	ID=id5063;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score 144.0%2C E-value 1.8e-40;gbkey=misc_feature;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	sequence_feature	3124998	3125054	.	-	.	ID=id5064;Note=7 probable transmembrane helices predicted for YE2872 by TMHMM2.0 at aa 15-33%2C 241-263%2C 298-320%2C 333-355%2C379-401%2C 468-490 and 495-517;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	3124308	3124376	.	-	.	ID=id5064;Note=7 probable transmembrane helices predicted for YE2872 by TMHMM2.0 at aa 15-33%2C 241-263%2C 298-320%2C 333-355%2C379-401%2C 468-490 and 495-517;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	3124137	3124205	.	-	.	ID=id5064;Note=7 probable transmembrane helices predicted for YE2872 by TMHMM2.0 at aa 15-33%2C 241-263%2C 298-320%2C 333-355%2C379-401%2C 468-490 and 495-517;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	3124032	3124100	.	-	.	ID=id5064;Note=7 probable transmembrane helices predicted for YE2872 by TMHMM2.0 at aa 15-33%2C 241-263%2C 298-320%2C 333-355%2C379-401%2C 468-490 and 495-517;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	3123894	3123962	.	-	.	ID=id5064;Note=7 probable transmembrane helices predicted for YE2872 by TMHMM2.0 at aa 15-33%2C 241-263%2C 298-320%2C 333-355%2C379-401%2C 468-490 and 495-517;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	3123627	3123695	.	-	.	ID=id5064;Note=7 probable transmembrane helices predicted for YE2872 by TMHMM2.0 at aa 15-33%2C 241-263%2C 298-320%2C 333-355%2C379-401%2C 468-490 and 495-517;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	3123546	3123614	.	-	.	ID=id5064;Note=7 probable transmembrane helices predicted for YE2872 by TMHMM2.0 at aa 15-33%2C 241-263%2C 298-320%2C 333-355%2C379-401%2C 468-490 and 495-517;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	3125172	3126440	.	-	.	ID=gene2817;Name=YE2873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2873
AM286415.1	EMBL	CDS	3125172	3126440	.	-	0	ID=cds2742;Parent=gene2817;Dbxref=EnsemblGenomes-Gn:YE2873,EnsemblGenomes-Tr:CAL12912,GOA:A1JTN7,InterPro:IPR000709,InterPro:IPR017777,InterPro:IPR028082,UniProtKB/TrEMBL:A1JTN7,NCBI_GP:CAL12912.1;Name=CAL12912.1;gbkey=CDS;product=putative substrate-binding periplasmic transport protein;protein_id=CAL12912.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3126348	3126416	.	-	.	ID=id5065;Note=1 probable transmembrane helix predicted for YE2873 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3126784	3127254	.	-	.	ID=gene2818;Name=YE2874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2874
AM286415.1	EMBL	CDS	3126784	3127254	.	-	0	ID=cds2743;Parent=gene2818;Dbxref=EnsemblGenomes-Gn:YE2874,EnsemblGenomes-Tr:CAL12913,InterPro:IPR009921,UniProtKB/TrEMBL:A1JTN8,NCBI_GP:CAL12913.1;Name=CAL12913.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12913.1;transl_table=11
AM286415.1	EMBL	gene	3127508	3128413	.	-	.	ID=gene2819;Name=YE2875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2875
AM286415.1	EMBL	CDS	3127508	3128413	.	-	0	ID=cds2744;Parent=gene2819;Dbxref=EnsemblGenomes-Gn:YE2875,EnsemblGenomes-Tr:CAL12914,GOA:A1JTP0,InterPro:IPR000515,InterPro:IPR005769,UniProtKB/TrEMBL:A1JTP0,NCBI_GP:CAL12914.1;Name=CAL12914.1;gbkey=CDS;product=putative ABC transport membrane permease;protein_id=CAL12914.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3128273	3128332	.	-	.	ID=id5066;Note=6 probable transmembrane helices predicted for YE2875 by TMHMM2.0 at aa 28-47%2C 89-111%2C 145-167%2C 205-222%2C229-246 and 251-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3128081	3128149	.	-	.	ID=id5066;Note=6 probable transmembrane helices predicted for YE2875 by TMHMM2.0 at aa 28-47%2C 89-111%2C 145-167%2C 205-222%2C229-246 and 251-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3127913	3127981	.	-	.	ID=id5066;Note=6 probable transmembrane helices predicted for YE2875 by TMHMM2.0 at aa 28-47%2C 89-111%2C 145-167%2C 205-222%2C229-246 and 251-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3127748	3127801	.	-	.	ID=id5066;Note=6 probable transmembrane helices predicted for YE2875 by TMHMM2.0 at aa 28-47%2C 89-111%2C 145-167%2C 205-222%2C229-246 and 251-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3127676	3127729	.	-	.	ID=id5066;Note=6 probable transmembrane helices predicted for YE2875 by TMHMM2.0 at aa 28-47%2C 89-111%2C 145-167%2C 205-222%2C229-246 and 251-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3127604	3127663	.	-	.	ID=id5066;Note=6 probable transmembrane helices predicted for YE2875 by TMHMM2.0 at aa 28-47%2C 89-111%2C 145-167%2C 205-222%2C229-246 and 251-270;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	3127664	3127876	.	-	.	ID=id5067;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 16.3%2C E-value 0.0015;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	3128413	3129216	.	-	.	ID=gene2820;Name=YE2876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2876
AM286415.1	EMBL	CDS	3128413	3129216	.	-	0	ID=cds2745;Parent=gene2820;Dbxref=EnsemblGenomes-Gn:YE2876,EnsemblGenomes-Tr:CAL12915,GOA:A1JSZ6,InterPro:IPR000515,InterPro:IPR005769,UniProtKB/TrEMBL:A1JSZ6,NCBI_GP:CAL12915.1;Name=CAL12915.1;gbkey=CDS;product=putative ABC transport membrane permease;protein_id=CAL12915.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3129130	3129198	.	-	.	ID=id5068;Note=4 probable transmembrane helices predicted for YE2876 by TMHMM2.0 at aa 7-29%2C 76-98%2C 124-146 and 234-251;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3128923	3128991	.	-	.	ID=id5068;Note=4 probable transmembrane helices predicted for YE2876 by TMHMM2.0 at aa 7-29%2C 76-98%2C 124-146 and 234-251;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3128779	3128847	.	-	.	ID=id5068;Note=4 probable transmembrane helices predicted for YE2876 by TMHMM2.0 at aa 7-29%2C 76-98%2C 124-146 and 234-251;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3128464	3128517	.	-	.	ID=id5068;Note=4 probable transmembrane helices predicted for YE2876 by TMHMM2.0 at aa 7-29%2C 76-98%2C 124-146 and 234-251;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3128527	3128739	.	-	.	ID=id5069;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 19.0%2C E-value 0.00082;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	3129345	3130274	.	-	.	ID=gene2821;Name=YE2877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2877
AM286415.1	EMBL	CDS	3129345	3130274	.	-	0	ID=cds2746;Parent=gene2821;Dbxref=EnsemblGenomes-Gn:YE2877,EnsemblGenomes-Tr:CAL12916,GOA:A1JSZ8,InterPro:IPR005770,InterPro:IPR017797,UniProtKB/TrEMBL:A1JSZ8,NCBI_GP:CAL12916.1;Name=CAL12916.1;gbkey=CDS;product=putative substrate-binding periplasmic transport protein;protein_id=CAL12916.1;transl_table=11
AM286415.1	EMBL	gene	3130311	3131147	.	-	.	ID=gene2822;Name=YE2878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2878
AM286415.1	EMBL	CDS	3130311	3131147	.	-	0	ID=cds2747;Parent=gene2822;Dbxref=EnsemblGenomes-Gn:YE2878,EnsemblGenomes-Tr:CAL12917,GOA:A1JSZ9,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR012693,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSZ9,NCBI_GP:CAL12917.1;Name=CAL12917.1;gbkey=CDS;product=putative ABC transport ATP-binding subunit;protein_id=CAL12917.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3130401	3130997	.	-	.	ID=id5070;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 166.0%2C E-value 4e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3130584	3130628	.	-	.	ID=id5071;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	3130953	3130976	.	-	.	ID=id5072;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3131344	3131619	.	-	.	ID=gene2823;Name=YE2879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2879
AM286415.1	EMBL	CDS	3131344	3131619	.	-	0	ID=cds2748;Parent=gene2823;Dbxref=EnsemblGenomes-Gn:YE2879,EnsemblGenomes-Tr:CAL12918,GOA:A1JT01,InterPro:IPR007341,UniProtKB/TrEMBL:A1JT01,NCBI_GP:CAL12918.1;Name=CAL12918.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12918.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3131542	3131610	.	-	.	ID=id5073;Note=3 probable transmembrane helices predicted for YE2879 by TMHMM2.0 at aa 4-26%2C 35-57 and 67-86;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3131449	3131517	.	-	.	ID=id5073;Note=3 probable transmembrane helices predicted for YE2879 by TMHMM2.0 at aa 4-26%2C 35-57 and 67-86;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3131362	3131421	.	-	.	ID=id5073;Note=3 probable transmembrane helices predicted for YE2879 by TMHMM2.0 at aa 4-26%2C 35-57 and 67-86;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3131747	3132850	.	-	.	ID=gene2824;Name=YE2880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2880
AM286415.1	EMBL	CDS	3131747	3132850	.	-	0	ID=cds2749;Parent=gene2824;Dbxref=EnsemblGenomes-Gn:YE2880,EnsemblGenomes-Tr:CAL12919,InterPro:IPR020941,UniProtKB/TrEMBL:A1JT02,NCBI_GP:CAL12919.1;Name=CAL12919.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12919.1;transl_table=11
AM286415.1	EMBL	gene	3133227	3133568	.	+	.	ID=gene2825;Name=YE2881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2881
AM286415.1	EMBL	CDS	3133227	3133568	.	+	0	ID=cds2750;Parent=gene2825;Dbxref=EnsemblGenomes-Gn:YE2881,EnsemblGenomes-Tr:CAL12920,GOA:A1JT03,InterPro:IPR002711,InterPro:IPR003615,InterPro:IPR015880,UniProtKB/TrEMBL:A1JT03,NCBI_GP:CAL12920.1;Name=CAL12920.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12920.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3133419	3133436	.	+	.	ID=id5074;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	3133632	3134171	.	-	.	ID=gene2826;Name=cyaB;gbkey=Gene;gene=cyaB;gene_biotype=protein_coding;locus_tag=YE2882
AM286415.1	EMBL	CDS	3133632	3134171	.	-	0	ID=cds2751;Parent=gene2826;Dbxref=EnsemblGenomes-Gn:YE2882,EnsemblGenomes-Tr:CAL12921,InterPro:IPR023577,UniProtKB/TrEMBL:A1JSQ8,NCBI_GP:CAL12921.1;Name=CAL12921.1;gbkey=CDS;gene=cyaB;product=adenylate cyclase 2;protein_id=CAL12921.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3133635	3134141	.	-	.	ID=id5075;Note=Pfam match to entry PF01928 Adenylate_cyc_2%2CAdenylate cyclase%2C score 128.7%2C E-value 7.2e-36;gbkey=misc_feature;gene=cyaB;inference=protein motif:PFAM:PF01928
AM286415.1	EMBL	gene	3134372	3136084	.	+	.	ID=gene2827;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=YE2883
AM286415.1	EMBL	CDS	3134372	3136084	.	+	0	ID=cds2752;Parent=gene2827;Dbxref=EnsemblGenomes-Gn:YE2883,EnsemblGenomes-Tr:CAL12922,GOA:A1JSR0,InterPro:IPR006094,InterPro:IPR012256,InterPro:IPR015409,InterPro:IPR016164,InterPro:IPR016166,InterPro:IPR016167,InterPro:IPR016169,InterPro:IPR016172,InterPro:IPR016173,UniProtKB/TrEMBL:A1JSR0,NCBI_GP:CAL12922.1;Name=CAL12922.1;gbkey=CDS;gene=dld;product=D-lactate dehydrogenase;protein_id=CAL12922.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3134507	3135010	.	+	.	ID=id5076;Note=Pfam match to entry PF01565 FAD_binding_4%2C FAD binding domain%2C score 49.8%2C E-value 3.8e-12;gbkey=misc_feature;gene=dld;inference=protein motif:PFAM:PF01565
AM286415.1	EMBL	sequence_feature	3134534	3134566	.	+	.	ID=id5077;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=dld;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3135839	3135859	.	+	.	ID=id5078;Note=PS00290 Immunoglobulins and major histocompatibility complex proteins signature.;gbkey=misc_feature;gene=dld;inference=protein motif:Prosite:PS00290
AM286415.1	EMBL	gene	3136432	3137367	.	-	.	ID=gene2828;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=YE2884
AM286415.1	EMBL	CDS	3136432	3137367	.	-	0	ID=cds2753;Parent=gene2828;Dbxref=EnsemblGenomes-Gn:YE2884,EnsemblGenomes-Tr:CAL12923,GOA:A1JSR1,InterPro:IPR001967,InterPro:IPR012338,InterPro:IPR018044,UniProtKB/TrEMBL:A1JSR1,NCBI_GP:CAL12923.1;Name=CAL12923.1;gbkey=CDS;gene=pbpG;product=penicillin-binding protein 7 precursor;protein_id=CAL12923.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3136507	3137277	.	-	.	ID=id5079;Note=Pfam match to entry PF00768 Peptidase_S11%2CD-alanyl-D-alanine carboxypeptidase%2C score 371.7%2C E-value 5e-109;gbkey=misc_feature;gene=pbpG;inference=protein motif:PFAM:PF00768
AM286415.1	EMBL	sequence_feature	3137281	3137349	.	-	.	ID=id5080;Note=1 probable transmembrane helix predicted for YE2884 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=pbpG;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3137850	3138482	.	+	.	ID=gene2829;Name=YE2885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2885
AM286415.1	EMBL	CDS	3137850	3138482	.	+	0	ID=cds2754;Parent=gene2829;Dbxref=EnsemblGenomes-Gn:YE2885,EnsemblGenomes-Tr:CAL12924,UniProtKB/TrEMBL:A1JSR3,NCBI_GP:CAL12924.1;Name=CAL12924.1;Note=Poor database matches. Similar to Salmonella typhi hypothetical protein O211 SWALL:Q93RR8 (EMBL:AJ313032) (211 aa) fasta scores: E(): 3.4e-45%2C 57.07 38d in 205 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ313032;product=conserved hypothetical protein;protein_id=CAL12924.1;transl_table=11
AM286415.1	EMBL	gene	3138551	3139489	.	-	.	ID=gene2830;Name=YE2886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2886
AM286415.1	EMBL	CDS	3138551	3139489	.	-	0	ID=cds2755;Parent=gene2830;Dbxref=EnsemblGenomes-Gn:YE2886,EnsemblGenomes-Tr:CAL12925,GOA:A1JSR4,InterPro:IPR001269,InterPro:IPR013785,InterPro:IPR018517,UniProtKB/TrEMBL:A1JSR4,NCBI_GP:CAL12925.1;Name=CAL12925.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12925.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3138566	3139480	.	-	.	ID=id5081;Note=Pfam match to entry PF01207 UPF0034%2C Dihydrouridine synthase (Dus)%2C score 427.5%2C E-value 8.1e-126;gbkey=misc_feature;inference=protein motif:PFAM:PF01207
AM286415.1	EMBL	sequence_feature	3139160	3139216	.	-	.	ID=id5082;Note=PS01136 Uncharacterized protein family UPF0034 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01136
AM286415.1	EMBL	repeat_region	3139631	3140509	.	-	.	ID=id5083;Note=IS4-like insertion sequence element IS1665;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	3139631	3139646	.	+	.	ID=id5084;Note=Inverted repeat for IS4-like element;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	stem_loop	3139632	3139663	.	-	.	ID=id5085;gbkey=stem_loop
AM286415.1	EMBL	gene	3139977	3140426	.	-	.	ID=gene2831;Name=YE2888;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2888;part=1/2
AM286415.1	EMBL	gene	3139640	3139975	.	-	.	ID=gene2831;Name=YE2888;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YE2888;part=2/2
AM286415.1	EMBL	CDS	3139977	3140426	.	-	0	ID=cds2756;Parent=gene2831;Dbxref=EnsemblGenomes-Gn:YE2888,EnsemblGenomes-Tr:CAL12926,InterPro:IPR024473,UniProtKB/TrEMBL:A1JSL3,NCBI_GP:CAL12926.1;Name=CAL12926.1;Note=Similar to the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 5.9e-54%2C 88.59 id in 149 aa%2C and to Shigella flexneri IS4 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 5.9e-54%2C88.59 38d in 149 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting%2C following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL12926.1;transl_table=11
AM286415.1	EMBL	CDS	3139640	3139975	.	-	0	ID=cds2756;Parent=gene2831;Dbxref=EnsemblGenomes-Gn:YE2888,EnsemblGenomes-Tr:CAL12926,InterPro:IPR024473,UniProtKB/TrEMBL:A1JSL3,NCBI_GP:CAL12926.1;Name=CAL12926.1;Note=Similar to the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 5.9e-54%2C 88.59 id in 149 aa%2C and to Shigella flexneri IS4 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 5.9e-54%2C88.59 38d in 149 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting%2C following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL12926.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3139970	3139976	.	-	.	ID=id5086;Note=possible site of programmed ribosomal slippage;gbkey=misc_feature
AM286415.1	EMBL	INVERTED	3140494	3140509	.	-	.	ID=id5087;Note=Inverted repeat for IS4-like element;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	3140549	3141904	.	-	.	ID=gene2832;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=YE2889
AM286415.1	EMBL	CDS	3140549	3141904	.	-	0	ID=cds2757;Parent=gene2832;Dbxref=EnsemblGenomes-Gn:YE2889,EnsemblGenomes-Tr:CAL12927,GOA:A1JSL5,InterPro:IPR000629,InterPro:IPR001650,InterPro:IPR011545,InterPro:IPR014001,InterPro:IPR014014,InterPro:IPR027417,InterPro:IPR028622,UniProtKB/TrEMBL:A1JSL5,NCBI_GP:CAL12927.1;Name=CAL12927.1;Note=Similar to Escherichia coli putative ATP-dependent RNA helicase RhlE SWALL:RHLE_ECOLI (SWALL:P25888) (454 aa) fasta scores: E(): 7.4e-118%2C 79.33 38d in 450 aa. Highly similar to Yersinia pestis probable ATP-dependent RNA helicase RhlE SWALL:Q93AA5 (EMBL:AF426171) (421 aa) fasta scores: E(): 4.8e-139%2C 99.05 38d in 421 aa. CDS is extended at the C-terminus in comparison to the Y. pestis protein;gbkey=CDS;gene=rhlE;inference=similar to sequence:UniProtKB:P25888;product=putative ATP-dependent RNA helicase;protein_id=CAL12927.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3140885	3141100	.	-	.	ID=id5088;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 118.8%2C E-value 6.5e-33;gbkey=misc_feature;gene=rhlE;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	3141236	3141865	.	-	.	ID=id5089;Note=Pfam match to entry PF00270 DEAD%2C DEAD/DEAH box helicase%2C score 271.7%2C E-value 6.1e-79;gbkey=misc_feature;gene=rhlE;inference=protein motif:PFAM:PF00270
AM286415.1	EMBL	sequence_feature	3141419	3141445	.	-	.	ID=id5090;Note=PS00039 DEAD-box subfamily ATP-dependent helicases signature.;gbkey=misc_feature;gene=rhlE;inference=protein motif:Prosite:PS00039
AM286415.1	EMBL	sequence_feature	3141749	3141772	.	-	.	ID=id5091;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=rhlE;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3142308	3143015	.	+	.	ID=gene2833;Name=YE2890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2890
AM286415.1	EMBL	CDS	3142308	3143015	.	+	0	ID=cds2758;Parent=gene2833;Dbxref=EnsemblGenomes-Gn:YE2890,EnsemblGenomes-Tr:CAL12928,GOA:A1JSL7,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR015292,InterPro:IPR015893,InterPro:IPR023772,UniProtKB/TrEMBL:A1JSL7,NCBI_GP:CAL12928.1;Name=CAL12928.1;Note=Similar to Pseudomonas putida regulatory protein PsrA SWALL:Q9EX90 (EMBL:AJ293485) (237 aa) fasta scores: E(): 0.00049%2C 26.51 38d in 215 aa%2C and to Yersinia pestis putative transcription regulator YbiH SWALL:Q93AA6 (EMBL:AF426171) (236 aa) fasta scores: E(): 6.2e-71%2C82.47 38d in 234 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ293485;product=TetR family transcription regulatory protein;protein_id=CAL12928.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3142383	3142523	.	+	.	ID=id5092;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 65.3%2C E-value 8.4e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00440
AM286415.1	EMBL	sequence_feature	3142419	3142511	.	+	.	ID=id5093;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01081
AM286415.1	EMBL	gene	3143202	3144188	.	+	.	ID=gene2834;Name=YE2891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2891
AM286415.1	EMBL	CDS	3143202	3144188	.	+	0	ID=cds2759;Parent=gene2834;Dbxref=EnsemblGenomes-Gn:YE2891,EnsemblGenomes-Tr:CAL12929,GOA:A1JSL8,InterPro:IPR006143,InterPro:IPR022936,NCBI_GP:CAL12929.1;Name=CAL12929.1;Note=Similar to Yersinia pestis hypothetical membrane protein ECS0873 SWALL:Y873_YERPE (SWALL:Q93AA7) (328 aa) fasta scores: E(): 6.9e-103%2C 90.82 38d in 327 aa%2C and to Salmonella typhi hypothetical membrane protein STY0853 SWALL:YBHG_SALTI (SWALL:Q8Z879) (331 aa) fasta scores: E(): 1.1e-74%2C 65.94 38d in 323 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q93AA7;product=HlyD family secretion protein;protein_id=CAL12929.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3143328	3144182	.	+	.	ID=id5094;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 57.0%2C E-value 2.7e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	sequence_feature	3143514	3143585	.	+	.	ID=id5095;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00179
AM286415.1	EMBL	gene	3144202	3145953	.	+	.	ID=gene2835;Name=YE2892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2892
AM286415.1	EMBL	CDS	3144202	3145953	.	+	0	ID=cds2760;Parent=gene2835;Dbxref=EnsemblGenomes-Gn:YE2892,EnsemblGenomes-Tr:CAL12930,GOA:A1JSM0,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSM0,NCBI_GP:CAL12930.1;Name=CAL12930.1;Note=Similar to Yersinia pestis putative ABC transporter ElsE SWALL:Q93AA8 (EMBL:AF426171) (580 aa) fasta scores: E(): 1.2e-180%2C 91.55 38d in 580 aa%2C and to Escherichia coli hypothetical ABC transporter ATP-binding protein YbhF SWALL:YBHF_ECOLI (SWALL:P75776) (578 aa) fasta scores: E(): 5.9e-146%2C 75.08 38d in 574 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75776;product=putative ABC transporter ATP-binding protein;protein_id=CAL12930.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3144319	3144846	.	+	.	ID=id5096;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 139.7%2C E-value 3.4e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3144325	3144348	.	+	.	ID=id5097;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3144622	3144666	.	+	.	ID=id5098;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	3145270	3145812	.	+	.	ID=id5099;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 177.3%2C E-value 1.6e-50;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3145291	3145314	.	+	.	ID=id5100;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3145950	3147140	.	+	.	ID=gene2836;Name=YE2893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2893
AM286415.1	EMBL	CDS	3145950	3147140	.	+	0	ID=cds2761;Parent=gene2836;Dbxref=EnsemblGenomes-Gn:YE2893,EnsemblGenomes-Tr:CAL12931,GOA:A1JSH0,InterPro:IPR000412,UniProtKB/TrEMBL:A1JSH0,NCBI_GP:CAL12931.1;Name=CAL12931.1;Note=Similar to Yersinia pestis hypothetical protein ElsD SWALL:Q93AA9 (EMBL:AF426171) (419 aa) fasta scores: E(): 4.8e-129%2C 91.21 38d in 387 aa%2C and to Salmonella typhimurium%2C and Salmonella typhi putative ABC superfamily STM0816 or STY0851 SWALL:Q8XGS9 (EMBL:AE008733) (376 aa) fasta scores: E(): 3.3e-107%2C 79.3 38d in 372 aa. CDS is extended at the N-terminus in comparison to the S. typhi protein and truncated in comparison to the Y. pestis protein. Possible alternative translational start site;gbkey=CDS;inference=similar to sequence:INSDC:AF426171;product=putative membrane protein;protein_id=CAL12931.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3146085	3146153	.	+	.	ID=id5101;Note=6 probable transmembrane helices predicted for YE2893 by TMHMM2.0 at aa 46-68%2C 201-223%2C 250-272%2C 282-304%2C311-333 and 365-387;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3146550	3146618	.	+	.	ID=id5101;Note=6 probable transmembrane helices predicted for YE2893 by TMHMM2.0 at aa 46-68%2C 201-223%2C 250-272%2C 282-304%2C311-333 and 365-387;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3146697	3146765	.	+	.	ID=id5101;Note=6 probable transmembrane helices predicted for YE2893 by TMHMM2.0 at aa 46-68%2C 201-223%2C 250-272%2C 282-304%2C311-333 and 365-387;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3146793	3146861	.	+	.	ID=id5101;Note=6 probable transmembrane helices predicted for YE2893 by TMHMM2.0 at aa 46-68%2C 201-223%2C 250-272%2C 282-304%2C311-333 and 365-387;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3146880	3146948	.	+	.	ID=id5101;Note=6 probable transmembrane helices predicted for YE2893 by TMHMM2.0 at aa 46-68%2C 201-223%2C 250-272%2C 282-304%2C311-333 and 365-387;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3147042	3147110	.	+	.	ID=id5101;Note=6 probable transmembrane helices predicted for YE2893 by TMHMM2.0 at aa 46-68%2C 201-223%2C 250-272%2C 282-304%2C311-333 and 365-387;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	3147174	3148280	.	+	.	ID=gene2837;Name=YE2894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2894
AM286415.1	EMBL	CDS	3147174	3148280	.	+	0	ID=cds2762;Parent=gene2837;Dbxref=EnsemblGenomes-Gn:YE2894,EnsemblGenomes-Tr:CAL12932,GOA:A1JSH1,InterPro:IPR000412,UniProtKB/TrEMBL:A1JSH1,NCBI_GP:CAL12932.1;Name=CAL12932.1;Note=Similar to Yersinia pestis hypothetical protein YbhR SWALL:Q93AB1 (EMBL:AF426171) (368 aa) fasta scores: E(): 2.7e-128%2C 96.46 38d in 368 aa%2C and to Escherichia coli hypothetical protein YbhR SWALL:YBHR_ECOLI (SWALL:P75774) (368 aa) fasta scores: E(): 4.1e-114%2C85.28 38d in 367 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75774;product=putative membrane protein;protein_id=CAL12932.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3147243	3147311	.	+	.	ID=id5102;Note=6 probable transmembrane helices predicted for YE2894 by TMHMM2.0 at aa 24-46%2C 173-195%2C 223-245%2C 255-277%2C284-303 and 340-362;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3147690	3147758	.	+	.	ID=id5102;Note=6 probable transmembrane helices predicted for YE2894 by TMHMM2.0 at aa 24-46%2C 173-195%2C 223-245%2C 255-277%2C284-303 and 340-362;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3147840	3147908	.	+	.	ID=id5102;Note=6 probable transmembrane helices predicted for YE2894 by TMHMM2.0 at aa 24-46%2C 173-195%2C 223-245%2C 255-277%2C284-303 and 340-362;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3147936	3148004	.	+	.	ID=id5102;Note=6 probable transmembrane helices predicted for YE2894 by TMHMM2.0 at aa 24-46%2C 173-195%2C 223-245%2C 255-277%2C284-303 and 340-362;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3148023	3148082	.	+	.	ID=id5102;Note=6 probable transmembrane helices predicted for YE2894 by TMHMM2.0 at aa 24-46%2C 173-195%2C 223-245%2C 255-277%2C284-303 and 340-362;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3148191	3148259	.	+	.	ID=id5102;Note=6 probable transmembrane helices predicted for YE2894 by TMHMM2.0 at aa 24-46%2C 173-195%2C 223-245%2C 255-277%2C284-303 and 340-362;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	3148597	3149307	.	-	.	ID=gene2838;Name=YE2895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2895
AM286415.1	EMBL	CDS	3148597	3149307	.	-	0	ID=cds2763;Parent=gene2838;Dbxref=EnsemblGenomes-Gn:YE2895,EnsemblGenomes-Tr:CAL12933,GOA:A1JSH3,InterPro:IPR006214,UniProtKB/TrEMBL:A1JSH3,NCBI_GP:CAL12933.1;Name=CAL12933.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12933.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3148600	3149178	.	-	.	ID=id5103;Note=Pfam match to entry PF01027 UPF0005%2CUncharacterized protein family UPF0005%2C score 217.4%2CE-value 1.4e-62;gbkey=misc_feature;inference=protein motif:PFAM:PF01027
AM286415.1	EMBL	sequence_feature	3149179	3149247	.	-	.	ID=id5104;Note=7 probable transmembrane helices predicted for YE2895 by TMHMM2.0 at aa 21-43%2C 53-75%2C 87-109%2C 114-133%2C140-162%2C 167-186 and 211-233;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	3149083	3149151	.	-	.	ID=id5104;Note=7 probable transmembrane helices predicted for YE2895 by TMHMM2.0 at aa 21-43%2C 53-75%2C 87-109%2C 114-133%2C140-162%2C 167-186 and 211-233;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	3148981	3149049	.	-	.	ID=id5104;Note=7 probable transmembrane helices predicted for YE2895 by TMHMM2.0 at aa 21-43%2C 53-75%2C 87-109%2C 114-133%2C140-162%2C 167-186 and 211-233;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	3148909	3148968	.	-	.	ID=id5104;Note=7 probable transmembrane helices predicted for YE2895 by TMHMM2.0 at aa 21-43%2C 53-75%2C 87-109%2C 114-133%2C140-162%2C 167-186 and 211-233;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	3148822	3148890	.	-	.	ID=id5104;Note=7 probable transmembrane helices predicted for YE2895 by TMHMM2.0 at aa 21-43%2C 53-75%2C 87-109%2C 114-133%2C140-162%2C 167-186 and 211-233;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	3148750	3148809	.	-	.	ID=id5104;Note=7 probable transmembrane helices predicted for YE2895 by TMHMM2.0 at aa 21-43%2C 53-75%2C 87-109%2C 114-133%2C140-162%2C 167-186 and 211-233;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	3148609	3148677	.	-	.	ID=id5104;Note=7 probable transmembrane helices predicted for YE2895 by TMHMM2.0 at aa 21-43%2C 53-75%2C 87-109%2C 114-133%2C140-162%2C 167-186 and 211-233;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	3149451	3149906	.	-	.	ID=gene2839;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;gene_synonym=chlA5;locus_tag=YE2896
AM286415.1	EMBL	CDS	3149451	3149906	.	-	0	ID=cds2764;Parent=gene2839;Dbxref=EnsemblGenomes-Gn:YE2896,EnsemblGenomes-Tr:CAL12934,GOA:A1JSH5,InterPro:IPR003448,UniProtKB/TrEMBL:A1JSH5,NCBI_GP:CAL12934.1;Name=CAL12934.1;gbkey=CDS;gene=moaE;product=molybdopterin [mpt] converting factor%2C subunit 2;protein_id=CAL12934.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3149538	3149891	.	-	.	ID=id5105;Note=Pfam match to entry PF02391 MoaE%2C MoaE protein %2Cscore 191.4%2C E-value 9.6e-55;gbkey=misc_feature;gene=moaE;inference=protein motif:PFAM:PF02391
AM286415.1	EMBL	gene	3149906	3150151	.	-	.	ID=gene2840;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;gene_synonym=chlA4,chlM;locus_tag=YE2897
AM286415.1	EMBL	CDS	3149906	3150151	.	-	0	ID=cds2765;Parent=gene2840;Dbxref=EnsemblGenomes-Gn:YE2897,EnsemblGenomes-Tr:CAL12935,GOA:A1JSH6,InterPro:IPR003749,InterPro:IPR010034,InterPro:IPR012675,InterPro:IPR016155,UniProtKB/TrEMBL:A1JSH6,NCBI_GP:CAL12935.1;Name=CAL12935.1;gbkey=CDS;gene=moaD;product=molybdopterin [mpt] converting factor%2C subunit 1;protein_id=CAL12935.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3149909	3150088	.	-	.	ID=id5106;Note=Pfam match to entry PF02597 DUF170%2C ThiS family %2Cscore 68.6%2C E-value 8.8e-18;gbkey=misc_feature;gene=moaD;inference=protein motif:PFAM:PF02597
AM286415.1	EMBL	gene	3150148	3150627	.	-	.	ID=gene2841;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;gene_synonym=chlA3;locus_tag=YE2898
AM286415.1	EMBL	CDS	3150148	3150627	.	-	0	ID=cds2766;Parent=gene2841;Dbxref=EnsemblGenomes-Gn:YE2898,EnsemblGenomes-Tr:CAL12936,GOA:A1JSH7,InterPro:IPR002820,InterPro:IPR023045,InterPro:IPR023046,NCBI_GP:CAL12936.1;Name=CAL12936.1;gbkey=CDS;gene=moaC;product=molybdenum cofactor biosynthesis protein C;protein_id=CAL12936.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3150178	3150585	.	-	.	ID=id5107;Note=Pfam match to entry PF01967 MoaC%2C MoaC family %2Cscore 314.7%2C E-value 7.2e-92;gbkey=misc_feature;gene=moaC;inference=protein motif:PFAM:PF01967
AM286415.1	EMBL	gene	3150659	3151639	.	-	.	ID=gene2842;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;gene_synonym=bisA,chlA,chlA1,narA;locus_tag=YE2899
AM286415.1	EMBL	CDS	3150659	3151639	.	-	0	ID=cds2767;Parent=gene2842;Dbxref=EnsemblGenomes-Gn:YE2899,EnsemblGenomes-Tr:CAL12937,GOA:A1JSC0,InterPro:IPR000385,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR010505,InterPro:IPR013483,InterPro:IPR013785,UniProtKB/TrEMBL:A1JSC0,NCBI_GP:CAL12937.1;Name=CAL12937.1;gbkey=CDS;gene=moaA;product=molybdenum cofactor biosynthesis protein A;protein_id=CAL12937.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3150836	3151480	.	-	.	ID=id5108;Note=Pfam match to entry PF01444 MoaA_NifB_PqqE%2C moaA / nifB / pqqE family%2C score 259.7%2C E-value 2.6e-75;gbkey=misc_feature;gene=moaA;inference=protein motif:PFAM:PF01444
AM286415.1	EMBL	sequence_feature	3150902	3150949	.	-	.	ID=id5109;Note=PS00225 Crystallins beta and gamma 'Greek key' motif signature.;gbkey=misc_feature;gene=moaA;inference=protein motif:Prosite:PS00225
AM286415.1	EMBL	sequence_feature	3151550	3151585	.	-	.	ID=id5110;Note=PS01305 moaA / nifB / pqqE family signature.;gbkey=misc_feature;gene=moaA;inference=protein motif:Prosite:PS01305
AM286415.1	EMBL	gene	3152092	3153015	.	+	.	ID=gene2843;Name=YE2900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2900
AM286415.1	EMBL	CDS	3152092	3153015	.	+	0	ID=cds2768;Parent=gene2843;Dbxref=EnsemblGenomes-Gn:YE2900,EnsemblGenomes-Tr:CAL12938,GOA:A1JSC1,InterPro:IPR002882,InterPro:IPR010119,UniProtKB/TrEMBL:A1JSC1,NCBI_GP:CAL12938.1;Name=CAL12938.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12938.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3152125	3152997	.	+	.	ID=id5111;Note=Pfam match to entry PF01933 UPF0052%2CUncharacterised protein family UPF0052%2C score 332.2%2CE-value 3.8e-97;gbkey=misc_feature;inference=protein motif:PFAM:PF01933
AM286415.1	EMBL	gene	3153030	3153278	.	-	.	ID=gene2844;Name=YE2901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2901
AM286415.1	EMBL	CDS	3153030	3153278	.	-	0	ID=cds2769;Parent=gene2844;Dbxref=EnsemblGenomes-Gn:YE2901,EnsemblGenomes-Tr:CAL12939,GOA:A1JSC2,InterPro:IPR003034,InterPro:IPR018668,UniProtKB/TrEMBL:A1JSC2,NCBI_GP:CAL12939.1;Name=CAL12939.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12939.1;transl_table=11
AM286415.1	EMBL	gene	3153347	3155359	.	-	.	ID=gene2845;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=YE2902
AM286415.1	EMBL	CDS	3153347	3155359	.	-	0	ID=cds2770;Parent=gene2845;Dbxref=EnsemblGenomes-Gn:YE2902,EnsemblGenomes-Tr:CAL12940,GOA:A1JSC3,InterPro:IPR001650,InterPro:IPR001943,InterPro:IPR004807,InterPro:IPR006935,InterPro:IPR014001,InterPro:IPR024759,InterPro:IPR027417,NCBI_GP:CAL12940.1;Name=CAL12940.1;gbkey=CDS;gene=uvrB;product=excinuclease ABC subunit B;protein_id=CAL12940.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3153365	3153472	.	-	.	ID=id5112;Note=Pfam match to entry PF02151 UVR%2C UvrB/uvrC motif %2Cscore 57.2%2C E-value 2.3e-14;gbkey=misc_feature;gene=uvrB;inference=protein motif:PFAM:PF02151
AM286415.1	EMBL	sequence_feature	3153722	3153952	.	-	.	ID=id5113;Note=Pfam match to entry PF00271 helicase_C%2C Helicase conserved C-terminal domain%2C score 70.1%2C E-value 3.1e-18;gbkey=misc_feature;gene=uvrB;inference=protein motif:PFAM:PF00271
AM286415.1	EMBL	sequence_feature	3155222	3155245	.	-	.	ID=id5114;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=uvrB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3156324	3157031	.	+	.	ID=gene2846;Name=YE2903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2903
AM286415.1	EMBL	CDS	3156324	3157031	.	+	0	ID=cds2771;Parent=gene2846;Dbxref=EnsemblGenomes-Gn:YE2903,EnsemblGenomes-Tr:CAL12941,GOA:A1JSC4,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSC4,NCBI_GP:CAL12941.1;Name=CAL12941.1;gbkey=CDS;product=putative amino acid transporter;protein_id=CAL12941.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3156402	3156962	.	+	.	ID=id5115;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 133.2%2C E-value 3e-37;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3156423	3156446	.	+	.	ID=id5116;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3157143	3157790	.	-	.	ID=gene2847;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=YE2904
AM286415.1	EMBL	CDS	3157143	3157790	.	-	0	ID=cds2772;Parent=gene2847;Dbxref=EnsemblGenomes-Gn:YE2904,EnsemblGenomes-Tr:CAL12942,GOA:A1JSC5,InterPro:IPR004472,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSC5,NCBI_GP:CAL12942.1;Name=CAL12942.1;gbkey=CDS;gene=bioD;product=dethiobiotin synthetase;protein_id=CAL12942.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3157218	3157790	.	-	.	ID=id5117;Note=Pfam match to entry PF01656 CbiA%2C Cobyrinic acid a%2Cc-diamide synthase%2C score 101.7%2C E-value 9.4e-28;gbkey=misc_feature;gene=bioD;inference=protein motif:PFAM:PF01656
AM286415.1	EMBL	gene	3157849	3158595	.	-	.	ID=gene2848;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=YE2905
AM286415.1	EMBL	CDS	3157849	3158595	.	-	0	ID=cds2773;Parent=gene2848;Dbxref=EnsemblGenomes-Gn:YE2905,EnsemblGenomes-Tr:CAL12943,GOA:A1JSC6,InterPro:IPR011814,InterPro:IPR013216,InterPro:IPR029063,UniProtKB/TrEMBL:A1JSC6,NCBI_GP:CAL12943.1;Name=CAL12943.1;gbkey=CDS;gene=bioC;product=biotin synthesis protein BioC;protein_id=CAL12943.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3157963	3158592	.	-	.	ID=id5118;Note=Pfam match to entry PF01209 Ubie_methyltran%2CubiE/COQ5 methyltransferase family%2C score -109.1%2C E-value 3.5e-05;gbkey=misc_feature;gene=bioC;inference=protein motif:PFAM:PF01209
AM286415.1	EMBL	sequence_feature	3158080	3158112	.	-	.	ID=id5119;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=bioC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3158440	3158475	.	-	.	ID=id5120;Note=PS00136 Serine proteases%2C subtilase family%2Caspartic acid active site.;gbkey=misc_feature;gene=bioC;inference=protein motif:Prosite:PS00136
AM286415.1	EMBL	gene	3158645	3159796	.	-	.	ID=gene2849;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=YE2906
AM286415.1	EMBL	CDS	3158645	3159796	.	-	0	ID=cds2774;Parent=gene2849;Dbxref=EnsemblGenomes-Gn:YE2906,EnsemblGenomes-Tr:CAL12944,GOA:A1JS67,InterPro:IPR001917,InterPro:IPR004723,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR022834,NCBI_GP:CAL12944.1;Name=CAL12944.1;gbkey=CDS;gene=bioF;product=8-amino-7-oxononanoate synthase;protein_id=CAL12944.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3158660	3159586	.	-	.	ID=id5121;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 149.4%2C E-value 4.1e-42;gbkey=misc_feature;gene=bioF;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	3159071	3159100	.	-	.	ID=id5122;Note=PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=bioF;inference=protein motif:Prosite:PS00599
AM286415.1	EMBL	gene	3159796	3160848	.	-	.	ID=gene2850;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=YE2907
AM286415.1	EMBL	CDS	3159796	3160848	.	-	0	ID=cds2775;Parent=gene2850;Dbxref=EnsemblGenomes-Gn:YE2907,EnsemblGenomes-Tr:CAL12945,GOA:A1JS69,InterPro:IPR002684,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR010722,InterPro:IPR013785,InterPro:IPR024177,NCBI_GP:CAL12945.1;Name=CAL12945.1;gbkey=CDS;gene=bioB;product=biotin synthase;protein_id=CAL12945.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3159916	3160836	.	-	.	ID=id5123;Note=Pfam match to entry PF01792 Biotin_synth%2C Biotin synthase%2C score 700.9%2C E-value 4.1e-208;gbkey=misc_feature;gene=bioB;inference=protein motif:PFAM:PF01792
AM286415.1	EMBL	sequence_feature	3159985	3160017	.	-	.	ID=id5124;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=bioB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3160948	3162225	.	+	.	ID=gene2851;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=YE2908
AM286415.1	EMBL	CDS	3160948	3162225	.	+	0	ID=cds2776;Parent=gene2851;Dbxref=EnsemblGenomes-Gn:YE2908,EnsemblGenomes-Tr:CAL12946,GOA:A1JS70,InterPro:IPR005814,InterPro:IPR005815,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JS70,NCBI_GP:CAL12946.1;Name=CAL12946.1;gbkey=CDS;gene=bioA;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;protein_id=CAL12946.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3160999	3162222	.	+	.	ID=id5125;Note=Pfam match to entry PF00202 aminotran_3%2CAminotransferase class-III%2C score 568.7%2C E-value 2.5e-168;gbkey=misc_feature;gene=bioA;inference=protein motif:PFAM:PF00202
AM286415.1	EMBL	sequence_feature	3161671	3161784	.	+	.	ID=id5126;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=bioA;inference=protein motif:Prosite:PS00600
AM286415.1	EMBL	gene	3162343	3163344	.	-	.	ID=gene2852;Name=YE2909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2909
AM286415.1	EMBL	CDS	3162343	3163344	.	-	0	ID=cds2777;Parent=gene2852;Dbxref=EnsemblGenomes-Gn:YE2909,EnsemblGenomes-Tr:CAL12947,GOA:A1JS71,InterPro:IPR011045,InterPro:IPR015943,InterPro:IPR019405,InterPro:IPR022528,NCBI_GP:CAL12947.1;Name=CAL12947.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12947.1;transl_table=11
AM286415.1	EMBL	gene	3163758	3164579	.	+	.	ID=gene2853;Name=YE2910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2910
AM286415.1	EMBL	CDS	3163758	3164579	.	+	0	ID=cds2778;Parent=gene2853;Dbxref=EnsemblGenomes-Gn:YE2910,EnsemblGenomes-Tr:CAL12948,GOA:A1JS72,InterPro:IPR000150,InterPro:IPR001757,InterPro:IPR006379,InterPro:IPR023214,UniProtKB/TrEMBL:A1JS72,NCBI_GP:CAL12948.1;Name=CAL12948.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12948.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3163764	3164489	.	+	.	ID=id5127;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 47.1%2C E-value 2.5e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	3164418	3164486	.	+	.	ID=id5128;Note=PS01229 Hypothetical cof family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01229
AM286415.1	EMBL	gene	3164739	3165803	.	-	.	ID=gene2854;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;gene_synonym=chlD,narD;locus_tag=YE2911
AM286415.1	EMBL	CDS	3164739	3165803	.	-	0	ID=cds2779;Parent=gene2854;Dbxref=EnsemblGenomes-Gn:YE2911,EnsemblGenomes-Tr:CAL12949,GOA:A1JS73,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR004606,InterPro:IPR005116,InterPro:IPR008995,InterPro:IPR011868,InterPro:IPR015852,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JS73,NCBI_GP:CAL12949.1;Name=CAL12949.1;gbkey=CDS;gene=modC;product=molybdenum transport ATP-binding protein ModC;protein_id=CAL12949.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3164748	3164936	.	-	.	ID=id5129;Note=Pfam match to entry PF03459 TOBE%2C TOBE domain %2Cscore 48.6%2C E-value 9.2e-12;gbkey=misc_feature;gene=modC;inference=protein motif:PFAM:PF03459
AM286415.1	EMBL	sequence_feature	3165189	3165734	.	-	.	ID=id5130;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 194.6%2C E-value 9.9e-56;gbkey=misc_feature;gene=modC;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3165375	3165419	.	-	.	ID=id5131;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=modC;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	3165690	3165713	.	-	.	ID=id5132;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=modC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3165797	3166492	.	-	.	ID=gene2855;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=YE2912
AM286415.1	EMBL	CDS	3165797	3166492	.	-	0	ID=cds2780;Parent=gene2855;Dbxref=EnsemblGenomes-Gn:YE2912,EnsemblGenomes-Tr:CAL12950,GOA:A1JS37,InterPro:IPR000515,InterPro:IPR011867,UniProtKB/TrEMBL:A1JS37,NCBI_GP:CAL12950.1;Name=CAL12950.1;gbkey=CDS;gene=modB;product=molybdenum transport system permease protein ModB;protein_id=CAL12950.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3166382	3166450	.	-	.	ID=id5133;Note=5 probable transmembrane helices predicted for YE2912 by TMHMM2.0 at aa 15-37%2C 49-71%2C 91-113%2C 134-156 and 197-219;gbkey=misc_feature;gene=modB;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3166280	3166348	.	-	.	ID=id5133;Note=5 probable transmembrane helices predicted for YE2912 by TMHMM2.0 at aa 15-37%2C 49-71%2C 91-113%2C 134-156 and 197-219;gbkey=misc_feature;gene=modB;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3166154	3166222	.	-	.	ID=id5133;Note=5 probable transmembrane helices predicted for YE2912 by TMHMM2.0 at aa 15-37%2C 49-71%2C 91-113%2C 134-156 and 197-219;gbkey=misc_feature;gene=modB;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3166025	3166093	.	-	.	ID=id5133;Note=5 probable transmembrane helices predicted for YE2912 by TMHMM2.0 at aa 15-37%2C 49-71%2C 91-113%2C 134-156 and 197-219;gbkey=misc_feature;gene=modB;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3165836	3165904	.	-	.	ID=id5133;Note=5 probable transmembrane helices predicted for YE2912 by TMHMM2.0 at aa 15-37%2C 49-71%2C 91-113%2C 134-156 and 197-219;gbkey=misc_feature;gene=modB;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	3165923	3166153	.	-	.	ID=id5134;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 78.9%2C E-value 6.8e-21;gbkey=misc_feature;gene=modB;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	3166492	3167268	.	-	.	ID=gene2856;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=YE2913
AM286415.1	EMBL	CDS	3166492	3167268	.	-	0	ID=cds2781;Parent=gene2856;Dbxref=EnsemblGenomes-Gn:YE2913,EnsemblGenomes-Tr:CAL12951,GOA:A1JS38,InterPro:IPR005950,UniProtKB/TrEMBL:A1JS38,NCBI_GP:CAL12951.1;Name=CAL12951.1;gbkey=CDS;gene=modA;product=molybdate-binding periplasmic protein precursor;protein_id=CAL12951.1;transl_table=11
AM286415.1	EMBL	gene	3167485	3167625	.	-	.	ID=gene2857;Name=YE2913A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2913A
AM286415.1	EMBL	CDS	3167485	3167625	.	-	0	ID=cds2782;Parent=gene2857;Dbxref=EnsemblGenomes-Gn:YE2913A,EnsemblGenomes-Tr:CAL12952,InterPro:IPR019702,UniProtKB/TrEMBL:A1JS39,NCBI_GP:CAL12952.1;Name=CAL12952.1;Note=Similar to Yersinia pestis putative membrane protein Ypo1144 or y3038 SWALL:Q8ZGX9 (EMBL:AJ414146) (50 aa) fasta scores: E(): 6.1e-14%2C 84.78 38d in 46 aa%2C and to Escherichia coli%2C Escherichia coli O6%2C Escherichia coli O157:H7%2C and Shigella flexneri hypothetical protein ybht precursor ybht or b0762 or c0838 or z0932 or ecs0790 or sf0542 SWALL:YBHT_ECOLI (SWALL:P75759) (49 aa) fasta scores: E(): 2.1e-10%2C 80 38d in 40 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75759;product=putative membrane protein;protein_id=CAL12952.1;transl_table=11
AM286415.1	EMBL	gene	3167860	3168651	.	+	.	ID=gene2858;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;gene_synonym=modR;locus_tag=YE2914
AM286415.1	EMBL	CDS	3167860	3168651	.	+	0	ID=cds2783;Parent=gene2858;Dbxref=EnsemblGenomes-Gn:YE2914,EnsemblGenomes-Tr:CAL12953,GOA:A1JS40,InterPro:IPR000847,InterPro:IPR003725,InterPro:IPR004606,InterPro:IPR005116,InterPro:IPR008995,InterPro:IPR011991,InterPro:IPR016462,UniProtKB/TrEMBL:A1JS40,NCBI_GP:CAL12953.1;Name=CAL12953.1;gbkey=CDS;gene=modE;product=molybdenum transport protein ModE;protein_id=CAL12953.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3167872	3168177	.	+	.	ID=id5135;Note=Pfam match to entry PF02573 HTH_9%2C N-terminal HTH domain of molybdenum-binding protein%2C score 182.7%2CE-value 3.8e-52;gbkey=misc_feature;gene=modE;inference=protein motif:PFAM:PF02573
AM286415.1	EMBL	sequence_feature	3168229	3168423	.	+	.	ID=id5136;Note=Pfam match to entry PF03459 TOBE%2C TOBE domain %2Cscore 55.4%2C E-value 8.3e-14;gbkey=misc_feature;gene=modE;inference=protein motif:PFAM:PF03459
AM286415.1	EMBL	sequence_feature	3168445	3168636	.	+	.	ID=id5137;Note=Pfam match to entry PF03459 TOBE%2C TOBE domain %2Cscore 49.4%2C E-value 5.1e-12;gbkey=misc_feature;gene=modE;inference=protein motif:PFAM:PF03459
AM286415.1	EMBL	gene	3168942	3170435	.	+	.	ID=gene2859;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;gene_synonym=phrA;locus_tag=YE2915
AM286415.1	EMBL	CDS	3168942	3170435	.	+	0	ID=cds2784;Parent=gene2859;Dbxref=EnsemblGenomes-Gn:YE2915,EnsemblGenomes-Tr:CAL12954,GOA:A1JS41,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR027417,UniProtKB/TrEMBL:A1JS41,NCBI_GP:CAL12954.1;Name=CAL12954.1;gbkey=CDS;gene=modF;product=putative molybdenum transport ATP-binding protein modF;protein_id=CAL12954.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3169044	3169592	.	+	.	ID=id5138;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 97.3%2C E-value 2e-26;gbkey=misc_feature;gene=modF;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3169065	3169088	.	+	.	ID=id5139;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=modF;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3169815	3170396	.	+	.	ID=id5140;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 165.3%2C E-value 6.8e-47;gbkey=misc_feature;gene=modF;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3169836	3169859	.	+	.	ID=id5141;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=modF;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3170637	3171455	.	+	.	ID=gene2860;Name=YE2916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2916
AM286415.1	EMBL	CDS	3170637	3171455	.	+	0	ID=cds2785;Parent=gene2860;Dbxref=EnsemblGenomes-Gn:YE2916,EnsemblGenomes-Tr:CAL12955,GOA:A1JS42,InterPro:IPR003675,UniProtKB/TrEMBL:A1JS42,NCBI_GP:CAL12955.1;Name=CAL12955.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12955.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3170649	3170717	.	+	.	ID=id5142;Note=9 probable transmembrane helices predicted for YE2916 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-83%2C 107-129%2C138-160%2C 165-184%2C 197-219%2C 223-242 and 247-269;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3170730	3170798	.	+	.	ID=id5142;Note=9 probable transmembrane helices predicted for YE2916 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-83%2C 107-129%2C138-160%2C 165-184%2C 197-219%2C 223-242 and 247-269;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3170817	3170885	.	+	.	ID=id5142;Note=9 probable transmembrane helices predicted for YE2916 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-83%2C 107-129%2C138-160%2C 165-184%2C 197-219%2C 223-242 and 247-269;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3170955	3171023	.	+	.	ID=id5142;Note=9 probable transmembrane helices predicted for YE2916 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-83%2C 107-129%2C138-160%2C 165-184%2C 197-219%2C 223-242 and 247-269;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3171048	3171116	.	+	.	ID=id5142;Note=9 probable transmembrane helices predicted for YE2916 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-83%2C 107-129%2C138-160%2C 165-184%2C 197-219%2C 223-242 and 247-269;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3171129	3171188	.	+	.	ID=id5142;Note=9 probable transmembrane helices predicted for YE2916 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-83%2C 107-129%2C138-160%2C 165-184%2C 197-219%2C 223-242 and 247-269;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3171225	3171293	.	+	.	ID=id5142;Note=9 probable transmembrane helices predicted for YE2916 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-83%2C 107-129%2C138-160%2C 165-184%2C 197-219%2C 223-242 and 247-269;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3171303	3171362	.	+	.	ID=id5142;Note=9 probable transmembrane helices predicted for YE2916 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-83%2C 107-129%2C138-160%2C 165-184%2C 197-219%2C 223-242 and 247-269;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3171375	3171443	.	+	.	ID=id5142;Note=9 probable transmembrane helices predicted for YE2916 by TMHMM2.0 at aa 5-27%2C 32-54%2C 61-83%2C 107-129%2C138-160%2C 165-184%2C 197-219%2C 223-242 and 247-269;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	3171150	3171428	.	+	.	ID=id5143;Note=Pfam match to entry PF02517 Abi%2C CAAX amino terminal protease family%2C score 59.5%2C E-value 4.7e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF02517
AM286415.1	EMBL	gene	3171753	3172769	.	+	.	ID=gene2861;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;gene_synonym=galD;locus_tag=YE2917
AM286415.1	EMBL	CDS	3171753	3172769	.	+	0	ID=cds2786;Parent=gene2861;Dbxref=EnsemblGenomes-Gn:YE2917,EnsemblGenomes-Tr:CAL12956,GOA:A1JRX3,InterPro:IPR001509,InterPro:IPR005886,InterPro:IPR016040,InterPro:IPR025308,UniProtKB/TrEMBL:A1JRX3,NCBI_GP:CAL12956.1;Name=CAL12956.1;gbkey=CDS;gene=galE;product=UDP-glucose 4-epimerase;protein_id=CAL12956.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3171759	3172751	.	+	.	ID=id5144;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 584.7%2CE-value 3.7e-173;gbkey=misc_feature;gene=galE;inference=protein motif:PFAM:PF01370
AM286415.1	EMBL	gene	3172779	3173885	.	+	.	ID=gene2862;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;gene_synonym=galB;locus_tag=YE2918
AM286415.1	EMBL	CDS	3172779	3173885	.	+	0	ID=cds2787;Parent=gene2862;Dbxref=EnsemblGenomes-Gn:YE2918,EnsemblGenomes-Tr:CAL12957,GOA:A1JRX4,InterPro:IPR001937,InterPro:IPR005849,InterPro:IPR005850,InterPro:IPR011146,InterPro:IPR019779,UniProtKB/TrEMBL:A1JRX4,NCBI_GP:CAL12957.1;Name=CAL12957.1;gbkey=CDS;gene=galT;product=galactose-1-phosphate uridylyltransferase;protein_id=CAL12957.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3172782	3173306	.	+	.	ID=id5145;Note=Pfam match to entry PF01087 GalP_UDP_transf%2CGalactose-1-phosphate uridyl transferase%2C N-terminal domain%2C score 350.8%2C E-value 9.4e-103;gbkey=misc_feature;gene=galT;inference=protein motif:PFAM:PF01087
AM286415.1	EMBL	sequence_feature	3173229	3173282	.	+	.	ID=id5146;Note=PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature.;gbkey=misc_feature;gene=galT;inference=protein motif:Prosite:PS00117
AM286415.1	EMBL	sequence_feature	3173310	3173876	.	+	.	ID=id5147;Note=Pfam match to entry PF02744 GalP_UDP_tr_C%2CGalactose-1-phosphate uridyl transferase%2C C-terminal domain%2C score 318.4%2C E-value 5.6e-93;gbkey=misc_feature;gene=galT;inference=protein motif:PFAM:PF02744
AM286415.1	EMBL	gene	3173885	3175036	.	+	.	ID=gene2863;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;gene_synonym=galA;locus_tag=YE2919
AM286415.1	EMBL	CDS	3173885	3175036	.	+	0	ID=cds2788;Parent=gene2863;Dbxref=EnsemblGenomes-Gn:YE2919,EnsemblGenomes-Tr:CAL12958,GOA:A1JRX5,InterPro:IPR000705,InterPro:IPR006203,InterPro:IPR006204,InterPro:IPR006206,InterPro:IPR013750,InterPro:IPR014721,InterPro:IPR019539,InterPro:IPR019741,InterPro:IPR020568,InterPro:IPR022963,NCBI_GP:CAL12958.1;Name=CAL12958.1;gbkey=CDS;gene=galK;product=galactokinase;protein_id=CAL12958.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3173942	3175033	.	+	.	ID=id5148;Note=Pfam match to entry PF00288 GHMP_kinases%2C GHMP kinases putative ATP-binding protein%2C score 350.8%2CE-value 9.8e-103;gbkey=misc_feature;gene=galK;inference=protein motif:PFAM:PF00288
AM286415.1	EMBL	sequence_feature	3173963	3173998	.	+	.	ID=id5149;Note=PS00106 Galactokinase signature.;gbkey=misc_feature;gene=galK;inference=protein motif:Prosite:PS00106
AM286415.1	EMBL	sequence_feature	3174245	3174280	.	+	.	ID=id5150;Note=PS00627 GHMP kinases putative ATP-binding domain.;gbkey=misc_feature;gene=galK;inference=protein motif:Prosite:PS00627
AM286415.1	EMBL	gene	3175030	3176094	.	+	.	ID=gene2864;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=YE2920
AM286415.1	EMBL	CDS	3175030	3176094	.	+	0	ID=cds2789;Parent=gene2864;Dbxref=EnsemblGenomes-Gn:YE2920,EnsemblGenomes-Tr:CAL12959,GOA:A1JRX7,InterPro:IPR008183,InterPro:IPR011013,InterPro:IPR013458,InterPro:IPR014718,InterPro:IPR015443,InterPro:IPR018052,UniProtKB/TrEMBL:A1JRX7,NCBI_GP:CAL12959.1;Name=CAL12959.1;Note=Similar to Escherichia coli aldose 1-epimerase GalM SWALL:GALM_ECOLI (SWALL:P40681) (346 aa) fasta scores: E(): 3.4e-86%2C 62.83 38d in 339 aa%2C and to Salmonella typhimurium galactose-1-epimerase STM0773 SWALL:Q8ZQS1 (EMBL:AE008731) (346 aa) fasta scores: E(): 2e-84%2C 61.53 id in 338 aa;gbkey=CDS;gene=galM;inference=similar to sequence:UniProtKB:P40681;product=aldose 1-epimerase;protein_id=CAL12959.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3175096	3176079	.	+	.	ID=id5151;Note=Pfam match to entry PF01263 Aldose_epim%2C Aldose 1-epimerase%2C score 388.0%2C E-value 5.9e-114;gbkey=misc_feature;gene=galM;inference=protein motif:PFAM:PF01263
AM286415.1	EMBL	sequence_feature	3175561	3175590	.	+	.	ID=id5152;Note=PS00545 Aldose 1-epimerase putative active site.;gbkey=misc_feature;gene=galM;inference=protein motif:Prosite:PS00545
AM286415.1	EMBL	gene	3176269	3176604	.	+	.	ID=gene2865;Name=psiF;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=YE2921
AM286415.1	EMBL	CDS	3176269	3176604	.	+	0	ID=cds2790;Parent=gene2865;Dbxref=EnsemblGenomes-Gn:YE2921,EnsemblGenomes-Tr:CAL12960,InterPro:IPR011690,UniProtKB/TrEMBL:A1JRS6,NCBI_GP:CAL12960.1;Name=CAL12960.1;gbkey=CDS;gene=psiF;product=putative starvation-inducible protein;protein_id=CAL12960.1;transl_table=11
AM286415.1	EMBL	gene	3176908	3178587	.	+	.	ID=gene2866;Name=YE2922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2922
AM286415.1	EMBL	CDS	3176908	3178587	.	+	0	ID=cds2791;Parent=gene2866;Dbxref=EnsemblGenomes-Gn:YE2922,EnsemblGenomes-Tr:CAL12961,GOA:A1JRS7,InterPro:IPR000209,InterPro:IPR015500,InterPro:IPR022398,UniProtKB/TrEMBL:A1JRS7,NCBI_GP:CAL12961.1;Name=CAL12961.1;Note=No significant database matches to the full length CDS. N-terminal region is similar to Bacillus licheniformis extracellular alkaline proteinase%2Csubtilisin DY Apr SWALL:SUBD_BACLI (SWALL:P00781) (274 aa) fasta scores: E(): 5.8e-15%2C 34.23 38d in 260 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P00781;product=putative protease;protein_id=CAL12961.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3176908	3177759	.	+	.	ID=id5153;Note=Pfam match to entry PF00082 Peptidase_S8%2C Subtilase family%2C score 31.7%2C E-value 1.6e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00082
AM286415.1	EMBL	sequence_feature	3177097	3177129	.	+	.	ID=id5154;Note=PS00137 Serine proteases%2C subtilase family%2Chistidine active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00137
AM286415.1	EMBL	gene	3178753	3179604	.	+	.	ID=gene2867;Name=nucA;gbkey=Gene;gene=nucA;gene_biotype=protein_coding;gene_synonym=nuc;locus_tag=YE2923
AM286415.1	EMBL	CDS	3178753	3179604	.	+	0	ID=cds2792;Parent=gene2867;Dbxref=EnsemblGenomes-Gn:YE2923,EnsemblGenomes-Tr:CAL12962,GOA:A1JRS9,InterPro:IPR001604,InterPro:IPR020821,UniProtKB/TrEMBL:A1JRS9,NCBI_GP:CAL12962.1;Name=CAL12962.1;Note=Similar to Serratia marcescens nuclease precursor NucA or Nuc SWALL:NUCA_SERMA (SWALL:P13717) (266 aa) fasta scores: E(): 5.5e-55%2C 60.16 38d in 241 aa%2C and to Salmonella typhimurium putative DNA/RNA non-specific endonuclease STM1330 SWALL:Q8ZPT1 (EMBL:AE008757) (284 aa) fasta scores: E(): 1.4e-67%2C 63.7 38d in 281 aa;gbkey=CDS;gene=nucA;inference=similar to sequence:UniProtKB:P13717;product=DNA/RNA non-specific endonuclease;protein_id=CAL12962.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3178885	3179553	.	+	.	ID=id5155;Note=Pfam match to entry PF01223 Endonuclease%2C DNA/RNA non-specific endonuclease%2C score 152.1%2C E-value 6.3e-43;gbkey=misc_feature;gene=nucA;inference=protein motif:PFAM:PF01223
AM286415.1	EMBL	gene	3179811	3180563	.	+	.	ID=gene2868;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;gene_synonym=gpm;locus_tag=YE2924
AM286415.1	EMBL	CDS	3179811	3180563	.	+	0	ID=cds2793;Parent=gene2868;Dbxref=EnsemblGenomes-Gn:YE2924,EnsemblGenomes-Tr:CAL12963,GOA:A1JRT1,InterPro:IPR001345,InterPro:IPR005952,InterPro:IPR013078,InterPro:IPR029033,NCBI_GP:CAL12963.1;Name=CAL12963.1;gbkey=CDS;gene=gpmA;product=phosphoglycerate mutase 1;protein_id=CAL12963.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3179820	3180494	.	+	.	ID=id5156;Note=Pfam match to entry PF00300 PGAM%2C Phosphoglycerate mutase family%2C score 458.4%2C E-value 3.9e-135;gbkey=misc_feature;gene=gpmA;inference=protein motif:PFAM:PF00300
AM286415.1	EMBL	sequence_feature	3179832	3179861	.	+	.	ID=id5157;Note=PS00175 Phosphoglycerate mutase family phosphohistidine signature.;gbkey=misc_feature;gene=gpmA;inference=protein motif:Prosite:PS00175
AM286415.1	EMBL	gene	3180666	3181748	.	-	.	ID=gene2869;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=YE2925
AM286415.1	EMBL	CDS	3180666	3181748	.	-	0	ID=cds2794;Parent=gene2869;Dbxref=EnsemblGenomes-Gn:YE2925,EnsemblGenomes-Tr:CAL12964,GOA:A1JRT2,InterPro:IPR006218,InterPro:IPR006219,InterPro:IPR013785,UniProtKB/TrEMBL:A1JRT2,NCBI_GP:CAL12964.1;Name=CAL12964.1;gbkey=CDS;gene=aroG;product=phospho-2-dehydro-3-deoxyheptonate aldolase%2Cphe-sensitive;protein_id=CAL12964.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3180681	3181658	.	-	.	ID=id5158;Note=Pfam match to entry PF00793 DAHP_synth_1%2C DAHP synthetase I family%2C score 592.3%2C E-value 1.9e-175;gbkey=misc_feature;gene=aroG;inference=protein motif:PFAM:PF00793
AM286415.1	EMBL	gene	3181963	3182895	.	+	.	ID=gene2870;Name=YE2926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2926
AM286415.1	EMBL	CDS	3181963	3182895	.	+	0	ID=cds2795;Parent=gene2870;Dbxref=EnsemblGenomes-Gn:YE2926,EnsemblGenomes-Tr:CAL12965,GOA:A1JRT4,InterPro:IPR002524,InterPro:IPR027469,InterPro:IPR027470,UniProtKB/TrEMBL:A1JRT4,NCBI_GP:CAL12965.1;Name=CAL12965.1;gbkey=CDS;product=putative cation transport protein;protein_id=CAL12965.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3182008	3182835	.	+	.	ID=id5159;Note=Pfam match to entry PF01545 Cation_efflux%2C Cation efflux family%2C score 382.0%2C E-value 3.9e-112;gbkey=misc_feature;inference=protein motif:PFAM:PF01545
AM286415.1	EMBL	sequence_feature	3182008	3182076	.	+	.	ID=id5160;Note=5 probable transmembrane helices predicted for YE2926 by TMHMM2.0 at aa 16-38%2C 48-65%2C 78-100%2C 115-137 and 150-172;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3182104	3182157	.	+	.	ID=id5160;Note=5 probable transmembrane helices predicted for YE2926 by TMHMM2.0 at aa 16-38%2C 48-65%2C 78-100%2C 115-137 and 150-172;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3182194	3182262	.	+	.	ID=id5160;Note=5 probable transmembrane helices predicted for YE2926 by TMHMM2.0 at aa 16-38%2C 48-65%2C 78-100%2C 115-137 and 150-172;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3182305	3182373	.	+	.	ID=id5160;Note=5 probable transmembrane helices predicted for YE2926 by TMHMM2.0 at aa 16-38%2C 48-65%2C 78-100%2C 115-137 and 150-172;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3182410	3182478	.	+	.	ID=id5160;Note=5 probable transmembrane helices predicted for YE2926 by TMHMM2.0 at aa 16-38%2C 48-65%2C 78-100%2C 115-137 and 150-172;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	3182506	3182553	.	+	.	ID=id5161;Note=PS00511 Corticotropin-releasing factor family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00511
AM286415.1	EMBL	gene	3182971	3183699	.	-	.	ID=gene2871;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=YE2927
AM286415.1	EMBL	CDS	3182971	3183699	.	-	0	ID=cds2796;Parent=gene2871;Dbxref=EnsemblGenomes-Gn:YE2927,EnsemblGenomes-Tr:CAL12966,GOA:A1JRP1,InterPro:IPR006419,UniProtKB/TrEMBL:A1JRP1,NCBI_GP:CAL12966.1;Name=CAL12966.1;gbkey=CDS;gene=pnuC;product=intergral membrane NMN transport protein PnuC;protein_id=CAL12966.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3183583	3183642	.	-	.	ID=id5162;Note=7 probable transmembrane helices predicted for YE2927 by TMHMM2.0 at aa 20-39%2C 46-68%2C 72-89%2C 110-132%2C159-176%2C 181-200 and 204-226;gbkey=misc_feature;gene=pnuC;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	3183496	3183564	.	-	.	ID=id5162;Note=7 probable transmembrane helices predicted for YE2927 by TMHMM2.0 at aa 20-39%2C 46-68%2C 72-89%2C 110-132%2C159-176%2C 181-200 and 204-226;gbkey=misc_feature;gene=pnuC;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	3183433	3183486	.	-	.	ID=id5162;Note=7 probable transmembrane helices predicted for YE2927 by TMHMM2.0 at aa 20-39%2C 46-68%2C 72-89%2C 110-132%2C159-176%2C 181-200 and 204-226;gbkey=misc_feature;gene=pnuC;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	3183304	3183372	.	-	.	ID=id5162;Note=7 probable transmembrane helices predicted for YE2927 by TMHMM2.0 at aa 20-39%2C 46-68%2C 72-89%2C 110-132%2C159-176%2C 181-200 and 204-226;gbkey=misc_feature;gene=pnuC;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	3183172	3183225	.	-	.	ID=id5162;Note=7 probable transmembrane helices predicted for YE2927 by TMHMM2.0 at aa 20-39%2C 46-68%2C 72-89%2C 110-132%2C159-176%2C 181-200 and 204-226;gbkey=misc_feature;gene=pnuC;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	3183100	3183159	.	-	.	ID=id5162;Note=7 probable transmembrane helices predicted for YE2927 by TMHMM2.0 at aa 20-39%2C 46-68%2C 72-89%2C 110-132%2C159-176%2C 181-200 and 204-226;gbkey=misc_feature;gene=pnuC;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	3183022	3183090	.	-	.	ID=id5162;Note=7 probable transmembrane helices predicted for YE2927 by TMHMM2.0 at aa 20-39%2C 46-68%2C 72-89%2C 110-132%2C159-176%2C 181-200 and 204-226;gbkey=misc_feature;gene=pnuC;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	3183947	3185008	.	-	.	ID=gene2872;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;gene_synonym=nicA;locus_tag=YE2928
AM286415.1	EMBL	CDS	3183947	3185008	.	-	0	ID=cds2797;Parent=gene2872;Dbxref=EnsemblGenomes-Gn:YE2928,EnsemblGenomes-Tr:CAL12967,GOA:A1JRP2,InterPro:IPR003473,InterPro:IPR023513,NCBI_GP:CAL12967.1;Name=CAL12967.1;gbkey=CDS;gene=nadA;product=quinolinate synthetase A;protein_id=CAL12967.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3183986	3184924	.	-	.	ID=id5163;Note=Pfam match to entry PF02445 NadA%2C Quinolinate synthetase A protein%2C score 604.7%2C E-value 3.6e-179;gbkey=misc_feature;gene=nadA;inference=protein motif:PFAM:PF02445
AM286415.1	EMBL	gene	3185286	3185361	.	-	.	ID=gene2873;Name=tRNA-Lys (TTT);gbkey=Gene;gene=tRNA-Lys (TTT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3185286	3185361	.	-	.	ID=rna101;Parent=gene2873;gbkey=tRNA;gene=tRNA-Lys (TTT);product=tRNA-Lys
AM286415.1	EMBL	exon	3185286	3185361	.	-	.	ID=id5164;Parent=rna101;gbkey=tRNA;gene=tRNA-Lys (TTT);product=tRNA-Lys
AM286415.1	EMBL	gene	3185420	3185495	.	-	.	ID=gene2874;Name=tRNA-Lys (TTT);gbkey=Gene;gene=tRNA-Lys (TTT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3185420	3185495	.	-	.	ID=rna102;Parent=gene2874;gbkey=tRNA;gene=tRNA-Lys (TTT);product=tRNA-Lys
AM286415.1	EMBL	exon	3185420	3185495	.	-	.	ID=id5165;Parent=rna102;gbkey=tRNA;gene=tRNA-Lys (TTT);product=tRNA-Lys
AM286415.1	EMBL	pseudogenic_tRNA	3185592	3185662	.	-	.	ID=rna103;Note=tRNA Pseudo anticodon TTT;gbkey=tRNA;pseudo=true
AM286415.1	EMBL	exon	3185592	3185662	.	-	.	ID=id5166;Parent=rna103;Note=tRNA Pseudo anticodon TTT;gbkey=tRNA;pseudo=true
AM286415.1	EMBL	gene	3185720	3185795	.	-	.	ID=gene2875;Name=tRNA-Lys (TTT);gbkey=Gene;gene=tRNA-Lys (TTT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3185720	3185795	.	-	.	ID=rna104;Parent=gene2875;gbkey=tRNA;gene=tRNA-Lys (TTT);product=tRNA-Lys
AM286415.1	EMBL	exon	3185720	3185795	.	-	.	ID=id5167;Parent=rna104;gbkey=tRNA;gene=tRNA-Lys (TTT);product=tRNA-Lys
AM286415.1	EMBL	gene	3185886	3185958	.	-	.	ID=gene2876;Name=tRNA-Lys (TTT);gbkey=Gene;gene=tRNA-Lys (TTT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3185886	3185958	.	-	.	ID=rna105;Parent=gene2876;gbkey=tRNA;gene=tRNA-Lys (TTT);product=tRNA-Lys
AM286415.1	EMBL	exon	3185886	3185958	.	-	.	ID=id5168;Parent=rna105;gbkey=tRNA;gene=tRNA-Lys (TTT);product=tRNA-Lys
AM286415.1	EMBL	gene	3186154	3186963	.	-	.	ID=gene2877;Name=YE2930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2930
AM286415.1	EMBL	CDS	3186154	3186963	.	-	0	ID=cds2798;Parent=gene2877;Dbxref=EnsemblGenomes-Gn:YE2930,EnsemblGenomes-Tr:CAL12968,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR014162,InterPro:IPR019734,InterPro:IPR026930,UniProtKB/TrEMBL:A1JRP4,NCBI_GP:CAL12968.1;Name=CAL12968.1;gbkey=CDS;product=putative exported protein;protein_id=CAL12968.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3186196	3186297	.	-	.	ID=id5169;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 11.9%2C E-value 0.15;gbkey=misc_feature;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	sequence_feature	3186307	3186408	.	-	.	ID=id5170;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 8.7%2C E-value 0.34;gbkey=misc_feature;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	gene	3186973	3187479	.	-	.	ID=gene2878;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;gene_synonym=excC;locus_tag=YE2931
AM286415.1	EMBL	CDS	3186973	3187479	.	-	0	ID=cds2799;Parent=gene2878;Dbxref=EnsemblGenomes-Gn:YE2931,EnsemblGenomes-Tr:CAL12969,GOA:A1JRK6,InterPro:IPR006664,InterPro:IPR006665,InterPro:IPR006690,InterPro:IPR014169,UniProtKB/TrEMBL:A1JRK6,NCBI_GP:CAL12969.1;Name=CAL12969.1;gbkey=CDS;gene=pal;product=peptidoglycan-associated lipoprotein Pal;protein_id=CAL12969.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3186994	3187281	.	-	.	ID=id5171;Note=Pfam match to entry PF00691 OmpA%2C OmpA family %2Cscore 172.6%2C E-value 4.1e-49;gbkey=misc_feature;gene=pal;inference=protein motif:PFAM:PF00691
AM286415.1	EMBL	sequence_feature	3187048	3187182	.	-	.	ID=id5172;Note=PS01068 OmpA-like domain.;gbkey=misc_feature;gene=pal;inference=protein motif:Prosite:PS01068
AM286415.1	EMBL	sequence_feature	3187414	3187446	.	-	.	ID=id5173;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pal;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3187528	3188820	.	-	.	ID=gene2879;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=YE2932
AM286415.1	EMBL	CDS	3187528	3188820	.	-	0	ID=cds2800;Parent=gene2879;Dbxref=EnsemblGenomes-Gn:YE2932,EnsemblGenomes-Tr:CAL12970,GOA:A1JRK8,InterPro:IPR007195,InterPro:IPR011659,InterPro:IPR014167,InterPro:IPR015943,NCBI_GP:CAL12970.1;Name=CAL12970.1;gbkey=CDS;gene=tolB;product=TolB colicin import protein;protein_id=CAL12970.1;transl_table=11
AM286415.1	EMBL	gene	3188940	3190100	.	-	.	ID=gene2880;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;gene_synonym=cim,excC,lky;locus_tag=YE2933
AM286415.1	EMBL	CDS	3188940	3190100	.	-	0	ID=cds2801;Parent=gene2880;Dbxref=EnsemblGenomes-Gn:YE2933,EnsemblGenomes-Tr:CAL12971,GOA:A1JRK9,InterPro:IPR014161,UniProtKB/TrEMBL:A1JRK9,NCBI_GP:CAL12971.1;Name=CAL12971.1;Note=Similar to Escherichia coli colicin import membrane protein TolA or Cim or ExcC or Lky SWALL:TOLA_ECOLI (SWALL:P19934) (421 aa) fasta scores: E(): 3e-26%2C 58.39 id in 423 aa%2C and to Yersinia pestis TolA colicin import membrane protein YPO1123 SWALL:Q8ZGZ2 (EMBL:AJ414146) (388 aa) fasta scores: E(): 4.9e-76%2C 90.97 38d in 388 aa. Contains coiled-coiled rich region%2C residues 80 to 246;gbkey=CDS;gene=tolA;inference=similar to sequence:UniProtKB:P19934;product=TolA colicin import membrane protein;protein_id=CAL12971.1;transl_table=11
AM286415.1	EMBL	gene	3190197	3190625	.	-	.	ID=gene2881;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=YE2934
AM286415.1	EMBL	CDS	3190197	3190625	.	-	0	ID=cds2802;Parent=gene2881;Dbxref=EnsemblGenomes-Gn:YE2934,EnsemblGenomes-Tr:CAL12972,GOA:A1JRL0,InterPro:IPR003400,InterPro:IPR014168,UniProtKB/TrEMBL:A1JRL0,NCBI_GP:CAL12972.1;Name=CAL12972.1;gbkey=CDS;gene=tolR;product=TolR colicin import membrane protein;protein_id=CAL12972.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3190200	3190601	.	-	.	ID=id5174;Note=Pfam match to entry PF02472 ExbD%2C Biopolymer transport protein ExbD/TolR%2C score 69.0%2C E-value 6.4e-18;gbkey=misc_feature;gene=tolR;inference=protein motif:PFAM:PF02472
AM286415.1	EMBL	sequence_feature	3190509	3190577	.	-	.	ID=id5175;Note=1 probable transmembrane helix predicted for YE2934 by TMHMM2.0 at aa 17-39;gbkey=misc_feature;gene=tolR;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3190638	3191324	.	-	.	ID=gene2882;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=YE2935
AM286415.1	EMBL	CDS	3190638	3191324	.	-	0	ID=cds2803;Parent=gene2882;Dbxref=EnsemblGenomes-Gn:YE2935,EnsemblGenomes-Tr:CAL12973,GOA:A1JRL2,InterPro:IPR002898,InterPro:IPR014163,UniProtKB/TrEMBL:A1JRL2,NCBI_GP:CAL12973.1;Name=CAL12973.1;gbkey=CDS;gene=tolQ;product=TolQ colicin import protein;protein_id=CAL12973.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3190692	3191108	.	-	.	ID=id5176;Note=Pfam match to entry PF01618 MotA_ExbB%2CMotA/TolQ/ExbB proton channel family%2C score 221.1%2CE-value 1e-63;gbkey=misc_feature;gene=tolQ;inference=protein motif:PFAM:PF01618
AM286415.1	EMBL	sequence_feature	3191214	3191282	.	-	.	ID=id5177;Note=3 probable transmembrane helices predicted for YE2935 by TMHMM2.0 at aa 15-37%2C 133-155 and 170-192;gbkey=misc_feature;gene=tolQ;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3190860	3190928	.	-	.	ID=id5177;Note=3 probable transmembrane helices predicted for YE2935 by TMHMM2.0 at aa 15-37%2C 133-155 and 170-192;gbkey=misc_feature;gene=tolQ;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3190749	3190817	.	-	.	ID=id5177;Note=3 probable transmembrane helices predicted for YE2935 by TMHMM2.0 at aa 15-37%2C 133-155 and 170-192;gbkey=misc_feature;gene=tolQ;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3191324	3191725	.	-	.	ID=gene2883;Name=YE2936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2936
AM286415.1	EMBL	CDS	3191324	3191725	.	-	0	ID=cds2804;Parent=gene2883;Dbxref=EnsemblGenomes-Gn:YE2936,EnsemblGenomes-Tr:CAL12974,GOA:A1JRF9,InterPro:IPR006683,InterPro:IPR006684,InterPro:IPR008272,InterPro:IPR014166,InterPro:IPR029069,UniProtKB/TrEMBL:A1JRF9,NCBI_GP:CAL12974.1;Name=CAL12974.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12974.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3191327	3191668	.	-	.	ID=id5178;Note=Pfam match to entry PF03061 4HBT%2C4-hydroxybenzoyl-CoA thioesterase%2C score 134.9%2C E-value 9.8e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF03061
AM286415.1	EMBL	sequence_feature	3191642	3191695	.	-	.	ID=id5179;Note=PS01328 4-hydroxybenzoyl-CoA thioesterase family active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS01328
AM286415.1	EMBL	gene	3191873	3192205	.	-	.	ID=gene2884;Name=YE2937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2937
AM286415.1	EMBL	CDS	3191873	3192205	.	-	0	ID=cds2805;Parent=gene2884;Dbxref=EnsemblGenomes-Gn:YE2937,EnsemblGenomes-Tr:CAL12975,InterPro:IPR011846,UniProtKB/TrEMBL:A1JRG0,NCBI_GP:CAL12975.1;Name=CAL12975.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12975.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3192068	3192121	.	-	.	ID=id5180;Note=3 probable transmembrane helices predicted for YE2937 by TMHMM2.0 at aa 29-46%2C 61-80 and 87-109;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3191966	3192025	.	-	.	ID=id5180;Note=3 probable transmembrane helices predicted for YE2937 by TMHMM2.0 at aa 29-46%2C 61-80 and 87-109;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3191879	3191947	.	-	.	ID=id5180;Note=3 probable transmembrane helices predicted for YE2937 by TMHMM2.0 at aa 29-46%2C 61-80 and 87-109;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3192297	3193436	.	-	.	ID=gene2885;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=YE2938
AM286415.1	EMBL	CDS	3192297	3193436	.	-	0	ID=cds2806;Parent=gene2885;Dbxref=EnsemblGenomes-Gn:YE2938,EnsemblGenomes-Tr:CAL12976,GOA:A1JRG2,InterPro:IPR003317,UniProtKB/TrEMBL:A1JRG2,NCBI_GP:CAL12976.1;Name=CAL12976.1;gbkey=CDS;gene=cydB;product=cytochrome D ubiquinol oxidase subunit II;protein_id=CAL12976.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3192336	3193424	.	-	.	ID=id5181;Note=Pfam match to entry PF02322 Cyto_ox_2%2C Cytochrome oxidase subunit II%2C score 701.3%2C E-value 2.9e-208;gbkey=misc_feature;gene=cydB;inference=protein motif:PFAM:PF02322
AM286415.1	EMBL	sequence_feature	3193365	3193418	.	-	.	ID=id5182;Note=8 probable transmembrane helices predicted for YE2938 by TMHMM2.0 at aa 7-24%2C 77-99%2C 122-144%2C 159-181%2C201-223%2C 263-285%2C 292-314 and 334-356;gbkey=misc_feature;gene=cydB;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3193140	3193208	.	-	.	ID=id5182;Note=8 probable transmembrane helices predicted for YE2938 by TMHMM2.0 at aa 7-24%2C 77-99%2C 122-144%2C 159-181%2C201-223%2C 263-285%2C 292-314 and 334-356;gbkey=misc_feature;gene=cydB;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3193005	3193073	.	-	.	ID=id5182;Note=8 probable transmembrane helices predicted for YE2938 by TMHMM2.0 at aa 7-24%2C 77-99%2C 122-144%2C 159-181%2C201-223%2C 263-285%2C 292-314 and 334-356;gbkey=misc_feature;gene=cydB;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3192894	3192962	.	-	.	ID=id5182;Note=8 probable transmembrane helices predicted for YE2938 by TMHMM2.0 at aa 7-24%2C 77-99%2C 122-144%2C 159-181%2C201-223%2C 263-285%2C 292-314 and 334-356;gbkey=misc_feature;gene=cydB;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3192768	3192836	.	-	.	ID=id5182;Note=8 probable transmembrane helices predicted for YE2938 by TMHMM2.0 at aa 7-24%2C 77-99%2C 122-144%2C 159-181%2C201-223%2C 263-285%2C 292-314 and 334-356;gbkey=misc_feature;gene=cydB;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3192582	3192650	.	-	.	ID=id5182;Note=8 probable transmembrane helices predicted for YE2938 by TMHMM2.0 at aa 7-24%2C 77-99%2C 122-144%2C 159-181%2C201-223%2C 263-285%2C 292-314 and 334-356;gbkey=misc_feature;gene=cydB;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3192495	3192563	.	-	.	ID=id5182;Note=8 probable transmembrane helices predicted for YE2938 by TMHMM2.0 at aa 7-24%2C 77-99%2C 122-144%2C 159-181%2C201-223%2C 263-285%2C 292-314 and 334-356;gbkey=misc_feature;gene=cydB;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3192369	3192437	.	-	.	ID=id5182;Note=8 probable transmembrane helices predicted for YE2938 by TMHMM2.0 at aa 7-24%2C 77-99%2C 122-144%2C 159-181%2C201-223%2C 263-285%2C 292-314 and 334-356;gbkey=misc_feature;gene=cydB;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	3193451	3195019	.	-	.	ID=gene2886;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=YE2939
AM286415.1	EMBL	CDS	3193451	3195019	.	-	0	ID=cds2807;Parent=gene2886;Dbxref=EnsemblGenomes-Gn:YE2939,EnsemblGenomes-Tr:CAL12977,GOA:A1JRG3,InterPro:IPR002585,UniProtKB/TrEMBL:A1JRG3,NCBI_GP:CAL12977.1;Name=CAL12977.1;gbkey=CDS;gene=cydA;product=cytochrome D ubiquinol oxidase subunit I;protein_id=CAL12977.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3193487	3195001	.	-	.	ID=id5183;Note=Pfam match to entry PF01654 Bac_Ubq_Cox%2C Bacterial Cytochrome Ubiquinol Oxidase%2C score 1090.1%2C E-value 0;gbkey=misc_feature;gene=cydA;inference=protein motif:PFAM:PF01654
AM286415.1	EMBL	sequence_feature	3194894	3194962	.	-	.	ID=id5184;Note=9 probable transmembrane helices predicted for YE2939 by TMHMM2.0 at aa 20-42%2C 54-76%2C 96-118%2C 125-147%2C185-207%2C 219-238%2C 387-409%2C 421-443 and 466-488;gbkey=misc_feature;gene=cydA;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3194792	3194860	.	-	.	ID=id5184;Note=9 probable transmembrane helices predicted for YE2939 by TMHMM2.0 at aa 20-42%2C 54-76%2C 96-118%2C 125-147%2C185-207%2C 219-238%2C 387-409%2C 421-443 and 466-488;gbkey=misc_feature;gene=cydA;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3194666	3194734	.	-	.	ID=id5184;Note=9 probable transmembrane helices predicted for YE2939 by TMHMM2.0 at aa 20-42%2C 54-76%2C 96-118%2C 125-147%2C185-207%2C 219-238%2C 387-409%2C 421-443 and 466-488;gbkey=misc_feature;gene=cydA;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3194579	3194647	.	-	.	ID=id5184;Note=9 probable transmembrane helices predicted for YE2939 by TMHMM2.0 at aa 20-42%2C 54-76%2C 96-118%2C 125-147%2C185-207%2C 219-238%2C 387-409%2C 421-443 and 466-488;gbkey=misc_feature;gene=cydA;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3194399	3194467	.	-	.	ID=id5184;Note=9 probable transmembrane helices predicted for YE2939 by TMHMM2.0 at aa 20-42%2C 54-76%2C 96-118%2C 125-147%2C185-207%2C 219-238%2C 387-409%2C 421-443 and 466-488;gbkey=misc_feature;gene=cydA;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3194306	3194365	.	-	.	ID=id5184;Note=9 probable transmembrane helices predicted for YE2939 by TMHMM2.0 at aa 20-42%2C 54-76%2C 96-118%2C 125-147%2C185-207%2C 219-238%2C 387-409%2C 421-443 and 466-488;gbkey=misc_feature;gene=cydA;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3193793	3193861	.	-	.	ID=id5184;Note=9 probable transmembrane helices predicted for YE2939 by TMHMM2.0 at aa 20-42%2C 54-76%2C 96-118%2C 125-147%2C185-207%2C 219-238%2C 387-409%2C 421-443 and 466-488;gbkey=misc_feature;gene=cydA;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3193691	3193759	.	-	.	ID=id5184;Note=9 probable transmembrane helices predicted for YE2939 by TMHMM2.0 at aa 20-42%2C 54-76%2C 96-118%2C 125-147%2C185-207%2C 219-238%2C 387-409%2C 421-443 and 466-488;gbkey=misc_feature;gene=cydA;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3193556	3193624	.	-	.	ID=id5184;Note=9 probable transmembrane helices predicted for YE2939 by TMHMM2.0 at aa 20-42%2C 54-76%2C 96-118%2C 125-147%2C185-207%2C 219-238%2C 387-409%2C 421-443 and 466-488;gbkey=misc_feature;gene=cydA;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	3195608	3197506	.	+	.	ID=gene2887;Name=YE2940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2940
AM286415.1	EMBL	CDS	3195608	3197506	.	+	0	ID=cds2808;Parent=gene2887;Dbxref=EnsemblGenomes-Gn:YE2940,EnsemblGenomes-Tr:CAL12978,GOA:A1JRG4,InterPro:IPR004843,InterPro:IPR006146,InterPro:IPR006179,InterPro:IPR008334,InterPro:IPR029052,UniProtKB/TrEMBL:A1JRG4,NCBI_GP:CAL12978.1;Name=CAL12978.1;Note=Similar to Vibrio cholerae putative 2`%2C3`-cyclic-nucleotide 2`-phosphodiesterase VC2416 SWALL:Q9KPF2 (EMBL:AE004311) (634 aa) fasta scores: E(): 3.1e-163%2C 68.97 38d in 635 aa%2C and to Vibrio parahaemolyticus 5'-nucleotidase precursor NutA SWALL:5NTD_VIBPA (SWALL:P22848) (560 aa) fasta scores: E(): 1.9e-11%2C 25.86 38d in 518 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P22848;product=putative 5'-nucleotidase;protein_id=CAL12978.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3195677	3196339	.	+	.	ID=id5185;Note=Pfam match to entry PF00149 Metallophos%2CCalcineurin-like phosphoesterase%2C score 69.9%2C E-value 3.5e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00149
AM286415.1	EMBL	sequence_feature	3195914	3195949	.	+	.	ID=id5186;Note=PS00786 5'-nucleotidase signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00786
AM286415.1	EMBL	sequence_feature	3196559	3197101	.	+	.	ID=id5187;Note=Pfam match to entry PF02872 5_nucleotidaseC%2C5'-nucleotidase%2C C-terminal domain%2C score 107.4%2C E-value 1.8e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF02872
AM286415.1	EMBL	gene	3197578	3198456	.	-	.	ID=gene2888;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=YE2941
AM286415.1	EMBL	CDS	3197578	3198456	.	-	0	ID=cds2809;Parent=gene2888;Dbxref=EnsemblGenomes-Gn:YE2941,EnsemblGenomes-Tr:CAL12979,GOA:A1JRB4,InterPro:IPR003781,InterPro:IPR005810,InterPro:IPR005811,InterPro:IPR016040,InterPro:IPR016102,InterPro:IPR017440,UniProtKB/TrEMBL:A1JRB4,NCBI_GP:CAL12979.1;Name=CAL12979.1;gbkey=CDS;gene=sucD;product=succinyl-CoA synthetase alpha chain;protein_id=CAL12979.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3197617	3198060	.	-	.	ID=id5188;Note=Pfam match to entry PF00549 ligase-CoA%2C CoA-ligase%2C score 229.4%2C E-value 3.4e-66;gbkey=misc_feature;gene=sucD;inference=protein motif:PFAM:PF00549
AM286415.1	EMBL	sequence_feature	3197710	3197751	.	-	.	ID=id5189;Note=PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site.;gbkey=misc_feature;gene=sucD;inference=protein motif:Prosite:PS00399
AM286415.1	EMBL	sequence_feature	3197914	3198003	.	-	.	ID=id5190;Note=PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1.;gbkey=misc_feature;gene=sucD;inference=protein motif:Prosite:PS01216
AM286415.1	EMBL	sequence_feature	3198112	3198447	.	-	.	ID=id5191;Note=Pfam match to entry PF02629 CoA_binding%2C CoA binding domain%2C score 242.5%2C E-value 4e-70;gbkey=misc_feature;gene=sucD;inference=protein motif:PFAM:PF02629
AM286415.1	EMBL	gene	3198456	3199622	.	-	.	ID=gene2889;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;gene_synonym=b0728;locus_tag=YE2942
AM286415.1	EMBL	CDS	3198456	3199622	.	-	0	ID=cds2810;Parent=gene2889;Dbxref=EnsemblGenomes-Gn:YE2942,EnsemblGenomes-Tr:CAL12980,GOA:A1JRB6,InterPro:IPR005809,InterPro:IPR005811,InterPro:IPR011761,InterPro:IPR013650,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR016102,InterPro:IPR017866,NCBI_GP:CAL12980.1;Name=CAL12980.1;gbkey=CDS;gene=sucC;product=succinyl-CoA synthetase beta chain;protein_id=CAL12980.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3198459	3198887	.	-	.	ID=id5192;Note=Pfam match to entry PF00549 ligase-CoA%2C CoA-ligase%2C score 282.1%2C E-value 4.5e-82;gbkey=misc_feature;gene=sucC;inference=protein motif:PFAM:PF00549
AM286415.1	EMBL	sequence_feature	3198780	3198854	.	-	.	ID=id5193;Note=PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3.;gbkey=misc_feature;gene=sucC;inference=protein motif:Prosite:PS01217
AM286415.1	EMBL	sequence_feature	3199029	3199538	.	-	.	ID=id5194;Note=Pfam match to entry PF02222 ATP-grasp%2C ATP-grasp domain%2C score 207.8%2C E-value 1.1e-59;gbkey=misc_feature;gene=sucC;inference=protein motif:PFAM:PF02222
AM286415.1	EMBL	sequence_feature	3199548	3199580	.	-	.	ID=id5195;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=sucC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3199736	3200959	.	-	.	ID=gene2890;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=YE2943
AM286415.1	EMBL	CDS	3199736	3200959	.	-	0	ID=cds2811;Parent=gene2890;Dbxref=EnsemblGenomes-Gn:YE2943,EnsemblGenomes-Tr:CAL12981,GOA:A1JRB8,InterPro:IPR000089,InterPro:IPR001078,InterPro:IPR003016,InterPro:IPR004167,InterPro:IPR006255,InterPro:IPR011053,InterPro:IPR023213,UniProtKB/TrEMBL:A1JRB8,NCBI_GP:CAL12981.1;Name=CAL12981.1;gbkey=CDS;gene=sucB;product=dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex;protein_id=CAL12981.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3199745	3200437	.	-	.	ID=id5196;Note=Pfam match to entry PF00198 2-oxoacid_dh%2C 2-oxo acid dehydrogenases acyltransferase (catalytic domain) %2Cscore 478.4%2C E-value 3.6e-141;gbkey=misc_feature;gene=sucB;inference=protein motif:PFAM:PF00198
AM286415.1	EMBL	sequence_feature	3200510	3200620	.	-	.	ID=id5197;Note=Pfam match to entry PF02817 e3_binding%2C e3 binding domain%2C score 57.7%2C E-value 1.7e-14;gbkey=misc_feature;gene=sucB;inference=protein motif:PFAM:PF02817
AM286415.1	EMBL	sequence_feature	3200729	3200950	.	-	.	ID=id5198;Note=Pfam match to entry PF00364 biotin_lipoyl%2CBiotin-requiring enzyme%2C score 90.4%2C E-value 2.4e-24;gbkey=misc_feature;gene=sucB;inference=protein motif:PFAM:PF00364
AM286415.1	EMBL	gene	3200988	3203795	.	-	.	ID=gene2891;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=YE2944
AM286415.1	EMBL	CDS	3200988	3203795	.	-	0	ID=cds2812;Parent=gene2891;Dbxref=EnsemblGenomes-Gn:YE2944,EnsemblGenomes-Tr:CAL12982,GOA:A1JRB9,InterPro:IPR001017,InterPro:IPR005475,InterPro:IPR011603,InterPro:IPR029061,UniProtKB/TrEMBL:A1JRB9,NCBI_GP:CAL12982.1;Name=CAL12982.1;gbkey=CDS;gene=sucA;product=2-oxoglutarate dehydrogenase E1 component;protein_id=CAL12982.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3201435	3202022	.	-	.	ID=id5199;Note=Pfam match to entry PF02779 transket_pyr%2CTransketolase%2C pyridine binding domain%2C score 254.5%2CE-value 9.2e-74;gbkey=misc_feature;gene=sucA;inference=protein motif:PFAM:PF02779
AM286415.1	EMBL	sequence_feature	3202203	3203177	.	-	.	ID=id5200;Note=Pfam match to entry PF00676 E1_dehydrog%2CDehydrogenase E1 component%2C score 109.9%2C E-value 3.1e-30;gbkey=misc_feature;gene=sucA;inference=protein motif:PFAM:PF00676
AM286415.1	EMBL	sequence_feature	3203637	3203654	.	-	.	ID=id5201;Note=PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide.;gbkey=misc_feature;gene=sucA;inference=protein motif:Prosite:PS00343
AM286415.1	EMBL	gene	3204090	3204806	.	-	.	ID=gene2892;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=YE2945
AM286415.1	EMBL	CDS	3204090	3204806	.	-	0	ID=cds2813;Parent=gene2892;Dbxref=EnsemblGenomes-Gn:YE2945,EnsemblGenomes-Tr:CAL12983,GOA:A1JR64,InterPro:IPR001041,InterPro:IPR004489,InterPro:IPR009051,InterPro:IPR012675,InterPro:IPR017896,InterPro:IPR017900,InterPro:IPR025192,UniProtKB/TrEMBL:A1JR64,NCBI_GP:CAL12983.1;Name=CAL12983.1;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur protein;protein_id=CAL12983.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3204327	3204362	.	-	.	ID=id5202;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=sdhB;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	3204860	3206626	.	-	.	ID=gene2893;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=YE2946
AM286415.1	EMBL	CDS	3204860	3206626	.	-	0	ID=cds2814;Parent=gene2893;Dbxref=EnsemblGenomes-Gn:YE2946,EnsemblGenomes-Tr:CAL12984,GOA:A1JR66,InterPro:IPR003952,InterPro:IPR003953,InterPro:IPR011281,InterPro:IPR013027,InterPro:IPR014006,InterPro:IPR015939,InterPro:IPR027477,UniProtKB/TrEMBL:A1JR66,NCBI_GP:CAL12984.1;Name=CAL12984.1;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=CAL12984.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3204863	3205249	.	-	.	ID=id5203;Note=Pfam match to entry PF02910 succ_DH_flav_C%2CFumarate reductase/succinate dehydrogenase flavoprotein C-terminal domain%2C score 222.4%2C E-value 4.3e-64;gbkey=misc_feature;gene=sdhA;inference=protein motif:PFAM:PF02910
AM286415.1	EMBL	sequence_feature	3205307	3206305	.	-	.	ID=id5204;Note=Pfam match to entry PF00890 FAD_binding_2%2C FAD binding domain%2C score 729.9%2C E-value 7.4e-217;gbkey=misc_feature;gene=sdhA;inference=protein motif:PFAM:PF00890
AM286415.1	EMBL	sequence_feature	3206471	3206500	.	-	.	ID=id5205;Note=PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site.;gbkey=misc_feature;gene=sdhA;inference=protein motif:Prosite:PS00504
AM286415.1	EMBL	sequence_feature	3206528	3206560	.	-	.	ID=id5206;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=sdhA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3206627	3206974	.	-	.	ID=gene2894;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=YE2947
AM286415.1	EMBL	CDS	3206627	3206974	.	-	0	ID=cds2815;Parent=gene2894;Dbxref=EnsemblGenomes-Gn:YE2947,EnsemblGenomes-Tr:CAL12985,GOA:A1JR67,InterPro:IPR000701,InterPro:IPR014312,UniProtKB/TrEMBL:A1JR67,NCBI_GP:CAL12985.1;Name=CAL12985.1;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase hydrophobic membrane anchor protein;protein_id=CAL12985.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3206858	3206926	.	-	.	ID=id5207;Note=3 probable transmembrane helices predicted for YE2947 by TMHMM2.0 at aa 17-39%2C 59-81 and 91-113;gbkey=misc_feature;gene=sdhD;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3206732	3206800	.	-	.	ID=id5207;Note=3 probable transmembrane helices predicted for YE2947 by TMHMM2.0 at aa 17-39%2C 59-81 and 91-113;gbkey=misc_feature;gene=sdhD;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3206636	3206704	.	-	.	ID=id5207;Note=3 probable transmembrane helices predicted for YE2947 by TMHMM2.0 at aa 17-39%2C 59-81 and 91-113;gbkey=misc_feature;gene=sdhD;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3206968	3207357	.	-	.	ID=gene2895;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA;locus_tag=YE2948
AM286415.1	EMBL	CDS	3206968	3207357	.	-	0	ID=cds2816;Parent=gene2895;Dbxref=EnsemblGenomes-Gn:YE2948,EnsemblGenomes-Tr:CAL12986,GOA:A1JR68,InterPro:IPR000701,InterPro:IPR014314,InterPro:IPR014361,InterPro:IPR018495,UniProtKB/TrEMBL:A1JR68,NCBI_GP:CAL12986.1;Name=CAL12986.1;gbkey=CDS;gene=sdhC;product=succinate dehydrogenase cytochrome b-556 subunit;protein_id=CAL12986.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3207208	3207276	.	-	.	ID=id5208;Note=3 probable transmembrane helices predicted for YE2948 by TMHMM2.0 at aa 28-50%2C 72-94 and 106-128;gbkey=misc_feature;gene=sdhC;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3207076	3207144	.	-	.	ID=id5208;Note=3 probable transmembrane helices predicted for YE2948 by TMHMM2.0 at aa 28-50%2C 72-94 and 106-128;gbkey=misc_feature;gene=sdhC;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3206974	3207042	.	-	.	ID=id5208;Note=3 probable transmembrane helices predicted for YE2948 by TMHMM2.0 at aa 28-50%2C 72-94 and 106-128;gbkey=misc_feature;gene=sdhC;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	3206989	3207342	.	-	.	ID=id5209;Note=Pfam match to entry PF01127 Sdh_cyt%2C Succinate dehydrogenase cytochrome b subunit%2C score 164.8%2C E-value 9.5e-47;gbkey=misc_feature;gene=sdhC;inference=protein motif:PFAM:PF01127
AM286415.1	EMBL	sequence_feature	3207067	3207108	.	-	.	ID=id5210;Note=PS01001 Succinate dehydrogenase cytochrome b subunit signature 2.;gbkey=misc_feature;gene=sdhC;inference=protein motif:Prosite:PS01001
AM286415.1	EMBL	sequence_feature	3207259	3207333	.	-	.	ID=id5211;Note=PS01000 Succinate dehydrogenase cytochrome b subunit signature 1.;gbkey=misc_feature;gene=sdhC;inference=protein motif:Prosite:PS01000
AM286415.1	EMBL	gene	3208007	3209287	.	+	.	ID=gene2896;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;gene_synonym=gluT,icdB;locus_tag=YE2949
AM286415.1	EMBL	CDS	3208007	3209287	.	+	0	ID=cds2817;Parent=gene2896;Dbxref=EnsemblGenomes-Gn:YE2949,EnsemblGenomes-Tr:CAL12987,GOA:A1JR32,InterPro:IPR002020,InterPro:IPR010953,InterPro:IPR016141,InterPro:IPR016142,InterPro:IPR016143,InterPro:IPR019810,InterPro:IPR024176,UniProtKB/TrEMBL:A1JR32,NCBI_GP:CAL12987.1;Name=CAL12987.1;gbkey=CDS;gene=gltA;product=citrate synthase GltA;protein_id=CAL12987.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3208139	3209230	.	+	.	ID=id5212;Note=Pfam match to entry PF00285 citrate_synt%2C Citrate synthase%2C score 786.7%2C E-value 6e-234;gbkey=misc_feature;gene=gltA;inference=protein motif:PFAM:PF00285
AM286415.1	EMBL	sequence_feature	3208910	3208948	.	+	.	ID=id5213;Note=PS00480 Citrate synthase signature.;gbkey=misc_feature;gene=gltA;inference=protein motif:Prosite:PS00480
AM286415.1	EMBL	gene	3209353	3210000	.	-	.	ID=gene2897;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=YE2950
AM286415.1	EMBL	CDS	3209353	3210000	.	-	0	ID=cds2818;Parent=gene2897;Dbxref=EnsemblGenomes-Gn:YE2950,EnsemblGenomes-Tr:CAL12988,GOA:A1JR34,InterPro:IPR000816,InterPro:IPR016125,InterPro:IPR029762,NCBI_GP:CAL12988.1;Name=CAL12988.1;gbkey=CDS;gene=pcp;product=putative pyrrolidone-carboxylate peptidase;protein_id=CAL12988.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3209389	3209997	.	-	.	ID=id5214;Note=Pfam match to entry PF01470 Peptidase_C15%2CPyroglutamyl peptidase%2C score 410.6%2C E-value 9.6e-121;gbkey=misc_feature;gene=pcp;inference=protein motif:PFAM:PF01470
AM286415.1	EMBL	sequence_feature	3209569	3209616	.	-	.	ID=id5215;Note=PS01334 Pyrrolidone-carboxylate peptidase cysteine active site.;gbkey=misc_feature;gene=pcp;inference=protein motif:Prosite:PS01334
AM286415.1	EMBL	sequence_feature	3209737	3209772	.	-	.	ID=id5216;Note=PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site.;gbkey=misc_feature;gene=pcp;inference=protein motif:Prosite:PS01333
AM286415.1	EMBL	gene	3210009	3211028	.	-	.	ID=gene2898;Name=YE2951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2951
AM286415.1	EMBL	CDS	3210009	3211028	.	-	0	ID=cds2819;Parent=gene2898;Dbxref=EnsemblGenomes-Gn:YE2951,EnsemblGenomes-Tr:CAL12989,InterPro:IPR009323,UniProtKB/TrEMBL:A1JR36,NCBI_GP:CAL12989.1;Name=CAL12989.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12989.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3210957	3211016	.	-	.	ID=id5217;Note=9 probable transmembrane helices predicted for YE2951 by TMHMM2.0 at aa 5-24%2C 36-53%2C 68-90%2C 111-133%2C148-170%2C 190-212%2C 232-254%2C 261-283 and 319-338;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3210870	3210923	.	-	.	ID=id5217;Note=9 probable transmembrane helices predicted for YE2951 by TMHMM2.0 at aa 5-24%2C 36-53%2C 68-90%2C 111-133%2C148-170%2C 190-212%2C 232-254%2C 261-283 and 319-338;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3210759	3210827	.	-	.	ID=id5217;Note=9 probable transmembrane helices predicted for YE2951 by TMHMM2.0 at aa 5-24%2C 36-53%2C 68-90%2C 111-133%2C148-170%2C 190-212%2C 232-254%2C 261-283 and 319-338;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3210630	3210698	.	-	.	ID=id5217;Note=9 probable transmembrane helices predicted for YE2951 by TMHMM2.0 at aa 5-24%2C 36-53%2C 68-90%2C 111-133%2C148-170%2C 190-212%2C 232-254%2C 261-283 and 319-338;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3210519	3210587	.	-	.	ID=id5217;Note=9 probable transmembrane helices predicted for YE2951 by TMHMM2.0 at aa 5-24%2C 36-53%2C 68-90%2C 111-133%2C148-170%2C 190-212%2C 232-254%2C 261-283 and 319-338;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3210393	3210461	.	-	.	ID=id5217;Note=9 probable transmembrane helices predicted for YE2951 by TMHMM2.0 at aa 5-24%2C 36-53%2C 68-90%2C 111-133%2C148-170%2C 190-212%2C 232-254%2C 261-283 and 319-338;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3210267	3210335	.	-	.	ID=id5217;Note=9 probable transmembrane helices predicted for YE2951 by TMHMM2.0 at aa 5-24%2C 36-53%2C 68-90%2C 111-133%2C148-170%2C 190-212%2C 232-254%2C 261-283 and 319-338;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3210180	3210248	.	-	.	ID=id5217;Note=9 probable transmembrane helices predicted for YE2951 by TMHMM2.0 at aa 5-24%2C 36-53%2C 68-90%2C 111-133%2C148-170%2C 190-212%2C 232-254%2C 261-283 and 319-338;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3210015	3210074	.	-	.	ID=id5217;Note=9 probable transmembrane helices predicted for YE2951 by TMHMM2.0 at aa 5-24%2C 36-53%2C 68-90%2C 111-133%2C148-170%2C 190-212%2C 232-254%2C 261-283 and 319-338;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	3210546	3210578	.	-	.	ID=id5218;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3211025	3211756	.	-	.	ID=gene2899;Name=YE2952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2952
AM286415.1	EMBL	CDS	3211025	3211756	.	-	0	ID=cds2820;Parent=gene2899;Dbxref=EnsemblGenomes-Gn:YE2952,EnsemblGenomes-Tr:CAL12990,InterPro:IPR010374,UniProtKB/TrEMBL:A1JR38,NCBI_GP:CAL12990.1;Name=CAL12990.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL12990.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3211691	3211744	.	-	.	ID=id5219;Note=5 probable transmembrane helices predicted for YE2952 by TMHMM2.0 at aa 5-22%2C 27-49%2C 59-76%2C 163-185 and 195-217;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3211610	3211678	.	-	.	ID=id5219;Note=5 probable transmembrane helices predicted for YE2952 by TMHMM2.0 at aa 5-22%2C 27-49%2C 59-76%2C 163-185 and 195-217;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3211529	3211582	.	-	.	ID=id5219;Note=5 probable transmembrane helices predicted for YE2952 by TMHMM2.0 at aa 5-22%2C 27-49%2C 59-76%2C 163-185 and 195-217;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3211202	3211270	.	-	.	ID=id5219;Note=5 probable transmembrane helices predicted for YE2952 by TMHMM2.0 at aa 5-22%2C 27-49%2C 59-76%2C 163-185 and 195-217;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3211106	3211174	.	-	.	ID=id5219;Note=5 probable transmembrane helices predicted for YE2952 by TMHMM2.0 at aa 5-22%2C 27-49%2C 59-76%2C 163-185 and 195-217;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	3211847	3212584	.	-	.	ID=gene2900;Name=YE2953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2953
AM286415.1	EMBL	CDS	3211847	3212584	.	-	0	ID=cds2821;Parent=gene2900;Dbxref=EnsemblGenomes-Gn:YE2953,EnsemblGenomes-Tr:CAL12991,GOA:A1JR39,InterPro:IPR005501,InterPro:IPR011330,NCBI_GP:CAL12991.1;Name=CAL12991.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12991.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3211871	3212581	.	-	.	ID=id5220;Note=Pfam match to entry PF03746 LamB_YcsF%2C LamB/YcsF family%2C score 494.0%2C E-value 7.4e-146;gbkey=misc_feature;inference=protein motif:PFAM:PF03746
AM286415.1	EMBL	gene	3212581	3213531	.	-	.	ID=gene2901;Name=YE2954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2954
AM286415.1	EMBL	CDS	3212581	3213531	.	-	0	ID=cds2822;Parent=gene2901;Dbxref=EnsemblGenomes-Gn:YE2954,EnsemblGenomes-Tr:CAL12992,InterPro:IPR003778,InterPro:IPR029000,UniProtKB/TrEMBL:A1JR41,NCBI_GP:CAL12992.1;Name=CAL12992.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12992.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3212638	3213465	.	-	.	ID=id5221;Note=Pfam match to entry PF02626 DUF183%2C Uncharacterized ACR%2C COG1984%2C score 477.9%2C E-value 5.2e-141;gbkey=misc_feature;inference=protein motif:PFAM:PF02626
AM286415.1	EMBL	sequence_feature	3213301	3213333	.	-	.	ID=id5222;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3213525	3214181	.	-	.	ID=gene2902;Name=YE2955A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2955A
AM286415.1	EMBL	CDS	3213525	3214181	.	-	0	ID=cds2823;Parent=gene2902;Dbxref=EnsemblGenomes-Gn:YE2955A,EnsemblGenomes-Tr:CAL12993,InterPro:IPR003833,InterPro:IPR010016,InterPro:IPR024946,InterPro:IPR029000,UniProtKB/TrEMBL:A1JQX4,NCBI_GP:CAL12993.1;Name=CAL12993.1;Note=Similar to many of undefined function including: Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YbgJ or b0711 or z0862 or ecs0736 SWALL:YBGJ_ECOLI (SWALL:P75744) (218 aa) fasta scores: E(): 9.9e-64%2C 72.93 38d in 218 aa and to Yersinia pestis putative carboxylase y1273 SWALL:Q8D108 (EMBL:AE013730) (181 aa) fasta scores: E(): 1.3e-64%2C 91.71 38d in 181 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75744;product=conserved hypothetical protein;protein_id=CAL12993.1;transl_table=11
AM286415.1	EMBL	gene	3214601	3215344	.	-	.	ID=gene2903;Name=YE2955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2955
AM286415.1	EMBL	CDS	3214601	3215344	.	-	0	ID=cds2824;Parent=gene2903;Dbxref=EnsemblGenomes-Gn:YE2955,EnsemblGenomes-Tr:CAL12994,GOA:A1JQX5,InterPro:IPR002678,UniProtKB/TrEMBL:A1JQX5,NCBI_GP:CAL12994.1;Name=CAL12994.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12994.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3214616	3215317	.	-	.	ID=id5223;Note=Pfam match to entry PF01784 DUF34%2C Domain of unknown function DUF34%2C score 320.6%2C E-value 1.2e-93;gbkey=misc_feature;inference=protein motif:PFAM:PF01784
AM286415.1	EMBL	gene	3215377	3216342	.	-	.	ID=gene2904;Name=YE2956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2956
AM286415.1	EMBL	CDS	3215377	3216342	.	-	0	ID=cds2825;Parent=gene2904;Dbxref=EnsemblGenomes-Gn:YE2956,EnsemblGenomes-Tr:CAL12995,GOA:A1JQX7,InterPro:IPR000396,InterPro:IPR001279,InterPro:IPR024225,UniProtKB/TrEMBL:A1JQX7,NCBI_GP:CAL12995.1;Name=CAL12995.1;gbkey=CDS;product=putative 3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=CAL12995.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3215395	3216297	.	-	.	ID=id5224;Note=Pfam match to entry PF02112 PDEase_II%2C cAMP phosphodiesterases class-II%2C score 278.0%2C E-value 8.2e-81;gbkey=misc_feature;inference=protein motif:PFAM:PF02112
AM286415.1	EMBL	sequence_feature	3216016	3216060	.	-	.	ID=id5225;Note=PS00607 cAMP phosphodiesterases class-II signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00607
AM286415.1	EMBL	gene	3216448	3217893	.	-	.	ID=gene2905;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;gene_synonym=phr;locus_tag=YE2957
AM286415.1	EMBL	CDS	3216448	3217893	.	-	0	ID=cds2826;Parent=gene2905;Dbxref=EnsemblGenomes-Gn:YE2957,EnsemblGenomes-Tr:CAL12996,GOA:A1JQX9,InterPro:IPR002081,InterPro:IPR005101,InterPro:IPR006050,InterPro:IPR014729,InterPro:IPR018394,UniProtKB/TrEMBL:A1JQX9,NCBI_GP:CAL12996.1;Name=CAL12996.1;gbkey=CDS;gene=phrB;product=putative deoxyribodipyrimidine photolyase;protein_id=CAL12996.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3216472	3217281	.	-	.	ID=id5226;Note=Pfam match to entry PF03441 FAD_binding_7%2C FAD binding domain of DNA photolyase%2C score 463.3%2C E-value 1.3e-136;gbkey=misc_feature;gene=phrB;inference=protein motif:PFAM:PF03441
AM286415.1	EMBL	sequence_feature	3216796	3216855	.	-	.	ID=id5227;Note=PS00691 DNA photolyases class 1 signature 2.;gbkey=misc_feature;gene=phrB;inference=protein motif:Prosite:PS00691
AM286415.1	EMBL	sequence_feature	3216877	3216915	.	-	.	ID=id5228;Note=PS00394 DNA photolyases class 1 signature 1.;gbkey=misc_feature;gene=phrB;inference=protein motif:Prosite:PS00394
AM286415.1	EMBL	sequence_feature	3217357	3217890	.	-	.	ID=id5229;Note=Pfam match to entry PF00875 DNA_photolyase%2C DNA photolyase%2C score 191.6%2C E-value 7.8e-55;gbkey=misc_feature;gene=phrB;inference=protein motif:PFAM:PF00875
AM286415.1	EMBL	gene	3217897	3218382	.	-	.	ID=gene2906;Name=YE2958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2958
AM286415.1	EMBL	CDS	3217897	3218382	.	-	0	ID=cds2827;Parent=gene2906;Dbxref=EnsemblGenomes-Gn:YE2958,EnsemblGenomes-Tr:CAL12997,InterPro:IPR013560,UniProtKB/TrEMBL:A1JQY1,NCBI_GP:CAL12997.1;Name=CAL12997.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL12997.1;transl_table=11
AM286415.1	EMBL	gene	3218478	3218684	.	-	.	ID=gene2907;Name=ybfA;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=YE2959
AM286415.1	EMBL	CDS	3218478	3218684	.	-	0	ID=cds2828;Parent=gene2907;Dbxref=EnsemblGenomes-Gn:YE2959,EnsemblGenomes-Tr:CAL12998,InterPro:IPR019663,UniProtKB/TrEMBL:A1JQY2,NCBI_GP:CAL12998.1;Name=CAL12998.1;gbkey=CDS;gene=ybfA;product=putative membrane protein;protein_id=CAL12998.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3218589	3218642	.	-	.	ID=id5230;Note=1 probable transmembrane helix predicted for YE2959 by TMHMM2.0 at aa 15-32;gbkey=misc_feature;gene=ybfA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3219258	3220946	.	+	.	ID=gene2908;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=YE2960
AM286415.1	EMBL	CDS	3219258	3220946	.	+	0	ID=cds2829;Parent=gene2908;Dbxref=EnsemblGenomes-Gn:YE2960,EnsemblGenomes-Tr:CAL12999,GOA:A1JQY4,InterPro:IPR004623,NCBI_GP:CAL12999.1;Name=CAL12999.1;gbkey=CDS;gene=kdpA;product=putative potassium-transporting ATPase A chain;protein_id=CAL12999.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3219270	3219338	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3219441	3219509	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3219645	3219713	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3219774	3219842	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3220014	3220082	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3220101	3220169	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3220236	3220304	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3220317	3220385	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3220395	3220454	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3220512	3220565	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3220704	3220772	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3220833	3220901	.	+	.	ID=id5231;Note=12 probable transmembrane helices predicted for YE2960 by TMHMM2.0 at aa 5-27%2C 62-84%2C 130-152%2C 173-195%2C253-275%2C 282-304%2C 327-349%2C 354-376%2C 380-399%2C 419-436%2C483-505 and 526-548;gbkey=misc_feature;gene=kdpA;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3219276	3220931	.	+	.	ID=id5232;Note=Pfam match to entry PF03814 KdpA%2CPotassium-transporting ATPase A subunit%2C score 1174.8%2CE-value 0;gbkey=misc_feature;gene=kdpA;inference=protein motif:PFAM:PF03814
AM286415.1	EMBL	sequence_feature	3220257	3220289	.	+	.	ID=id5233;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=kdpA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3221042	3223108	.	+	.	ID=gene2909;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=YE2961
AM286415.1	EMBL	CDS	3221042	3223108	.	+	0	ID=cds2830;Parent=gene2909;Dbxref=EnsemblGenomes-Gn:YE2961,EnsemblGenomes-Tr:CAL13000,GOA:A1JQS2,InterPro:IPR001757,InterPro:IPR006391,InterPro:IPR008250,InterPro:IPR018303,InterPro:IPR023214,InterPro:IPR023299,NCBI_GP:CAL13000.1;Name=CAL13000.1;gbkey=CDS;gene=kdpB;product=putative potassium-transporting ATPase B chain;protein_id=CAL13000.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3221144	3221203	.	+	.	ID=id5234;Note=7 probable transmembrane helices predicted for YE2961 by TMHMM2.0 at aa 35-54%2C 59-81%2C 219-241%2C 256-278%2C581-603%2C 618-640 and 660-682;gbkey=misc_feature;gene=kdpB;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	3221216	3221284	.	+	.	ID=id5234;Note=7 probable transmembrane helices predicted for YE2961 by TMHMM2.0 at aa 35-54%2C 59-81%2C 219-241%2C 256-278%2C581-603%2C 618-640 and 660-682;gbkey=misc_feature;gene=kdpB;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	3221696	3221764	.	+	.	ID=id5234;Note=7 probable transmembrane helices predicted for YE2961 by TMHMM2.0 at aa 35-54%2C 59-81%2C 219-241%2C 256-278%2C581-603%2C 618-640 and 660-682;gbkey=misc_feature;gene=kdpB;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	3221807	3221875	.	+	.	ID=id5234;Note=7 probable transmembrane helices predicted for YE2961 by TMHMM2.0 at aa 35-54%2C 59-81%2C 219-241%2C 256-278%2C581-603%2C 618-640 and 660-682;gbkey=misc_feature;gene=kdpB;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	3222782	3222850	.	+	.	ID=id5234;Note=7 probable transmembrane helices predicted for YE2961 by TMHMM2.0 at aa 35-54%2C 59-81%2C 219-241%2C 256-278%2C581-603%2C 618-640 and 660-682;gbkey=misc_feature;gene=kdpB;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	3222893	3222961	.	+	.	ID=id5234;Note=7 probable transmembrane helices predicted for YE2961 by TMHMM2.0 at aa 35-54%2C 59-81%2C 219-241%2C 256-278%2C581-603%2C 618-640 and 660-682;gbkey=misc_feature;gene=kdpB;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	3223019	3223087	.	+	.	ID=id5234;Note=7 probable transmembrane helices predicted for YE2961 by TMHMM2.0 at aa 35-54%2C 59-81%2C 219-241%2C 256-278%2C581-603%2C 618-640 and 660-682;gbkey=misc_feature;gene=kdpB;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	3221252	3221950	.	+	.	ID=id5235;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 196.7%2C E-value 2.3e-56;gbkey=misc_feature;gene=kdpB;inference=protein motif:PFAM:PF00122
AM286415.1	EMBL	sequence_feature	3221960	3222676	.	+	.	ID=id5236;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 126.1%2C E-value 4.2e-35;gbkey=misc_feature;gene=kdpB;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	3221978	3221998	.	+	.	ID=id5237;Note=PS00154 E1-E2 ATPases phosphorylation site.;gbkey=misc_feature;gene=kdpB;inference=protein motif:Prosite:PS00154
AM286415.1	EMBL	gene	3223244	3223846	.	+	.	ID=gene2910;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=YE2962
AM286415.1	EMBL	CDS	3223244	3223846	.	+	0	ID=cds2831;Parent=gene2910;Dbxref=EnsemblGenomes-Gn:YE2962,EnsemblGenomes-Tr:CAL13001,GOA:A1JQS4,InterPro:IPR003820,NCBI_GP:CAL13001.1;Name=CAL13001.1;gbkey=CDS;gene=kdpC;product=putative potassium-transporting ATPase C chain;protein_id=CAL13001.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3223244	3223807	.	+	.	ID=id5238;Note=Pfam match to entry PF02669 KdpC%2C K+-transporting ATPase%2C c chain%2C score 294.2%2C E-value 1.1e-85;gbkey=misc_feature;gene=kdpC;inference=protein motif:PFAM:PF02669
AM286415.1	EMBL	sequence_feature	3223262	3223330	.	+	.	ID=id5239;Note=1 probable transmembrane helix predicted for YE2962 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=kdpC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3223856	3226555	.	+	.	ID=gene2911;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=YE2963
AM286415.1	EMBL	CDS	3223856	3226555	.	+	0	ID=cds2832;Parent=gene2911;Dbxref=EnsemblGenomes-Gn:YE2963,EnsemblGenomes-Tr:CAL13002,GOA:A1JQS6,InterPro:IPR003018,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR003852,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR006016,InterPro:IPR009082,InterPro:IPR014729,InterPro:IPR025201,InterPro:IPR027417,InterPro:IPR029016,UniProtKB/TrEMBL:A1JQS6,NCBI_GP:CAL13002.1;Name=CAL13002.1;gbkey=CDS;gene=kdpD;product=two-component regulatory protein sensor kinase KdpD;protein_id=CAL13002.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3223859	3224995	.	+	.	ID=id5240;Note=Pfam match to entry PF02702 KdpD%2C Osmosensitive K+ channel His kinase sensor domain%2C score 730.8%2C E-value 3.9e-217;gbkey=misc_feature;gene=kdpD;inference=protein motif:PFAM:PF02702
AM286415.1	EMBL	sequence_feature	3223949	3223972	.	+	.	ID=id5241;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=kdpD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3225053	3225121	.	+	.	ID=id5242;Note=4 probable transmembrane helices predicted for YE2963 by TMHMM2.0 at aa 400-422%2C 427-445%2C 450-472 and 477-499;gbkey=misc_feature;gene=kdpD;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3225134	3225190	.	+	.	ID=id5242;Note=4 probable transmembrane helices predicted for YE2963 by TMHMM2.0 at aa 400-422%2C 427-445%2C 450-472 and 477-499;gbkey=misc_feature;gene=kdpD;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3225203	3225271	.	+	.	ID=id5242;Note=4 probable transmembrane helices predicted for YE2963 by TMHMM2.0 at aa 400-422%2C 427-445%2C 450-472 and 477-499;gbkey=misc_feature;gene=kdpD;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3225284	3225352	.	+	.	ID=id5242;Note=4 probable transmembrane helices predicted for YE2963 by TMHMM2.0 at aa 400-422%2C 427-445%2C 450-472 and 477-499;gbkey=misc_feature;gene=kdpD;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3225848	3226051	.	+	.	ID=id5243;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 63.3%2C E-value 3.3e-16;gbkey=misc_feature;gene=kdpD;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	3226181	3226510	.	+	.	ID=id5244;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 120.5%2C E-value 2e-33;gbkey=misc_feature;gene=kdpD;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	3226714	3227241	.	+	.	ID=gene2912;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=YE2964
AM286415.1	EMBL	CDS	3226714	3227241	.	+	0	ID=cds2833;Parent=gene2912;Dbxref=EnsemblGenomes-Gn:YE2964,EnsemblGenomes-Tr:CAL13003,GOA:A1JQS7,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JQS7,NCBI_GP:CAL13003.1;Name=CAL13003.1;gbkey=CDS;gene=kdpE;product=two-component regulatory protein response regulator KdpE;protein_id=CAL13003.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3226714	3226923	.	+	.	ID=id5245;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 9.1%2C E-value 0.00011;gbkey=misc_feature;gene=kdpE;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	3227005	3227223	.	+	.	ID=id5246;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 105.8%2C E-value 5.3e-29;gbkey=misc_feature;gene=kdpE;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	gene	3227334	3227762	.	+	.	ID=gene2913;Name=YE2965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2965
AM286415.1	EMBL	CDS	3227334	3227762	.	+	0	ID=cds2834;Parent=gene2913;Dbxref=EnsemblGenomes-Gn:YE2965,EnsemblGenomes-Tr:CAL13004,GOA:A1JQP5,InterPro:IPR000620,UniProtKB/TrEMBL:A1JQP5,NCBI_GP:CAL13004.1;Name=CAL13004.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13004.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3227352	3227420	.	+	.	ID=id5247;Note=5 probable transmembrane helices predicted for YE2965 by TMHMM2.0 at aa 7-29%2C 39-61%2C 68-90%2C 95-117 and 122-141;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3227448	3227516	.	+	.	ID=id5247;Note=5 probable transmembrane helices predicted for YE2965 by TMHMM2.0 at aa 7-29%2C 39-61%2C 68-90%2C 95-117 and 122-141;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3227535	3227603	.	+	.	ID=id5247;Note=5 probable transmembrane helices predicted for YE2965 by TMHMM2.0 at aa 7-29%2C 39-61%2C 68-90%2C 95-117 and 122-141;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3227616	3227684	.	+	.	ID=id5247;Note=5 probable transmembrane helices predicted for YE2965 by TMHMM2.0 at aa 7-29%2C 39-61%2C 68-90%2C 95-117 and 122-141;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3227697	3227756	.	+	.	ID=id5247;Note=5 probable transmembrane helices predicted for YE2965 by TMHMM2.0 at aa 7-29%2C 39-61%2C 68-90%2C 95-117 and 122-141;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	3227370	3227756	.	+	.	ID=id5248;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 85.4%2C E-value 7.7e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	3227908	3229359	.	+	.	ID=gene2914;Name=YE2966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2966
AM286415.1	EMBL	CDS	3227908	3229359	.	+	0	ID=cds2835;Parent=gene2914;Dbxref=EnsemblGenomes-Gn:YE2966,EnsemblGenomes-Tr:CAL13005,GOA:A1JQP7,InterPro:IPR001343,InterPro:IPR011049,InterPro:IPR018511,UniProtKB/TrEMBL:A1JQP7,NCBI_GP:CAL13005.1;Name=CAL13005.1;Note=No significant database matches to the full length CDS. Internal region is similar to the C-terminal region of Actinobacillus pleuropneumoniae RTX-III toxin determinant A from serotype 2 ApxIIIA or ClyIIIA or RtxA or PtxA SWALL:RT31_ACTPL (SWALL:P55130) (1049 aa) fasta scores: E(): 9.5e-13%2C 27.82 38d in 345 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P55130;product=putative hemolysin;protein_id=CAL13005.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3228364	3228417	.	+	.	ID=id5249;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 20.1%2C E-value 0.0034;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	3228418	3228471	.	+	.	ID=id5250;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 8.3%2C E-value 1.7;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	3228463	3228519	.	+	.	ID=id5251;Note=PS00330 Hemolysin-type calcium-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00330
AM286415.1	EMBL	sequence_feature	3228472	3228525	.	+	.	ID=id5252;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 17.7%2C E-value 0.018;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	3228526	3228579	.	+	.	ID=id5253;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 15.2%2C E-value 0.1;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	3228613	3228666	.	+	.	ID=id5254;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 15.0%2C E-value 0.11;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	3228631	3228687	.	+	.	ID=id5255;Note=PS00330 Hemolysin-type calcium-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00330
AM286415.1	EMBL	sequence_feature	3228667	3228720	.	+	.	ID=id5256;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 16.1%2C E-value 0.056;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	gene	3229442	3231082	.	-	.	ID=gene2915;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=YE2967
AM286415.1	EMBL	CDS	3229442	3231082	.	-	0	ID=cds2836;Parent=gene2915;Dbxref=EnsemblGenomes-Gn:YE2967,EnsemblGenomes-Tr:CAL13006,GOA:A1JQP9,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR005852,InterPro:IPR016055,InterPro:IPR016066,UniProtKB/TrEMBL:A1JQP9,NCBI_GP:CAL13006.1;Name=CAL13006.1;gbkey=CDS;gene=pgm;product=phosphoglucomutase;protein_id=CAL13006.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3229451	3229720	.	-	.	ID=id5257;Note=Pfam match to entry PF00408 PGM_PMM%2CPhosphoglucomutase/phosphomannomutase%2C C-terminal domain %2Cscore 44.2%2C E-value 1.8e-10;gbkey=misc_feature;gene=pgm;inference=protein motif:PFAM:PF00408
AM286415.1	EMBL	sequence_feature	3229763	3230125	.	-	.	ID=id5258;Note=Pfam match to entry PF02880 PGM_PMM_III%2CPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%2C score 105.4%2C E-value 7.4e-29;gbkey=misc_feature;gene=pgm;inference=protein motif:PFAM:PF02880
AM286415.1	EMBL	sequence_feature	3230039	3230062	.	-	.	ID=id5259;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=pgm;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3230126	3230458	.	-	.	ID=id5260;Note=Pfam match to entry PF02879 PGM_PMM_II%2CPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%2C score 73.2%2C E-value 3.6e-19;gbkey=misc_feature;gene=pgm;inference=protein motif:PFAM:PF02879
AM286415.1	EMBL	sequence_feature	3230519	3230977	.	-	.	ID=id5261;Note=Pfam match to entry PF02878 PGM_PMM_I%2CPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I%2C score 153.2%2C E-value 2.9e-43;gbkey=misc_feature;gene=pgm;inference=protein motif:PFAM:PF02878
AM286415.1	EMBL	sequence_feature	3230621	3230665	.	-	.	ID=id5262;Note=PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature.;gbkey=misc_feature;gene=pgm;inference=protein motif:Prosite:PS00710
AM286415.1	EMBL	gene	3231175	3231714	.	-	.	ID=gene2916;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=YE2968
AM286415.1	EMBL	CDS	3231175	3231714	.	-	0	ID=cds2837;Parent=gene2916;Dbxref=EnsemblGenomes-Gn:YE2968,EnsemblGenomes-Tr:CAL13007,GOA:A1JQK9,InterPro:IPR005621,InterPro:IPR010985,InterPro:IPR013321,InterPro:IPR026577,UniProtKB/TrEMBL:A1JQK9,NCBI_GP:CAL13007.1;Name=CAL13007.1;gbkey=CDS;gene=seqA;product=putative negative regulator of replication initiation;protein_id=CAL13007.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3231178	3231714	.	-	.	ID=id5263;Note=Pfam match to entry PF03925 SeqA%2C SeqA protein %2Cscore 373.1%2C E-value 1.9e-109;gbkey=misc_feature;gene=seqA;inference=protein motif:PFAM:PF03925
AM286415.1	EMBL	gene	3231928	3232722	.	+	.	ID=gene2917;Name=YE2969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2969
AM286415.1	EMBL	CDS	3231928	3232722	.	+	0	ID=cds2838;Parent=gene2917;Dbxref=EnsemblGenomes-Gn:YE2969,EnsemblGenomes-Tr:CAL13008,InterPro:IPR000073,InterPro:IPR029058,UniProtKB/TrEMBL:A1JQL0,NCBI_GP:CAL13008.1;Name=CAL13008.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13008.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3232054	3232683	.	+	.	ID=id5264;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 74.3%2C E-value 1.6e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00561
AM286415.1	EMBL	gene	3233066	3233353	.	+	.	ID=gene2918;Name=YE2970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2970
AM286415.1	EMBL	CDS	3233066	3233353	.	+	0	ID=cds2839;Parent=gene2918;Dbxref=EnsemblGenomes-Gn:YE2970,EnsemblGenomes-Tr:CAL13009,GOA:A1JQL1,InterPro:IPR002145,UniProtKB/TrEMBL:A1JQL1,NCBI_GP:CAL13009.1;Name=CAL13009.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13009.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3233210	3233335	.	+	.	ID=id5265;Note=Pfam match to entry PF01402 HTH_4%2CRibbon-helix-helix protein%2C copG family%2C score 26.5%2CE-value 4e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01402
AM286415.1	EMBL	gene	3233420	3235078	.	-	.	ID=gene2919;Name=YE2971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2971
AM286415.1	EMBL	CDS	3233420	3235078	.	-	0	ID=cds2840;Parent=gene2919;Dbxref=EnsemblGenomes-Gn:YE2971,EnsemblGenomes-Tr:CAL13010,GOA:A1JQL2,InterPro:IPR003122,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,InterPro:IPR004091,UniProtKB/TrEMBL:A1JQL2,NCBI_GP:CAL13010.1;Name=CAL13010.1;Note=Similar to Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or CheM SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 1.2e-66%2C 46.69 id in 559 aa%2C and to Yersinia pestis methyl-accepting chemotaxis protein YPO1675 SWALL:Q8ZFM2 (EMBL:AJ414149) (557 aa) fasta scores: E(): 1.1e-66%2C 46.16 38d in 574 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P02941;product=putative methyl-accepting chemotaxis protein;protein_id=CAL13010.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3233525	3234223	.	-	.	ID=id5266;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 371.6%2C E-value 5.4e-109;gbkey=misc_feature;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	sequence_feature	3234131	3234199	.	-	.	ID=id5267;Note=PS00538 Bacterial chemotaxis sensory transducers signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00538
AM286415.1	EMBL	sequence_feature	3234974	3235042	.	-	.	ID=id5268;Note=1 probable transmembrane helix predicted for YE2971 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3235301	3235828	.	+	.	ID=gene2920;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=YE2972
AM286415.1	EMBL	CDS	3235301	3235828	.	+	0	ID=cds2841;Parent=gene2920;Dbxref=EnsemblGenomes-Gn:YE2972,EnsemblGenomes-Tr:CAL13011,GOA:A1JQL3,InterPro:IPR001226,InterPro:IPR008254,InterPro:IPR010086,InterPro:IPR029039,UniProtKB/TrEMBL:A1JQL3,NCBI_GP:CAL13011.1;Name=CAL13011.1;gbkey=CDS;gene=fldA;product=flavodoxin 1;protein_id=CAL13011.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3235307	3235804	.	+	.	ID=id5269;Note=Pfam match to entry PF00258 flavodoxin%2C Flavodoxin%2C score 166.8%2C E-value 2.3e-47;gbkey=misc_feature;gene=fldA;inference=protein motif:PFAM:PF00258
AM286415.1	EMBL	sequence_feature	3235316	3235366	.	+	.	ID=id5270;Note=PS00201 Flavodoxin signature.;gbkey=misc_feature;gene=fldA;inference=protein motif:Prosite:PS00201
AM286415.1	EMBL	gene	3236197	3236643	.	+	.	ID=gene2921;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=YE2973
AM286415.1	EMBL	CDS	3236197	3236643	.	+	0	ID=cds2842;Parent=gene2921;Dbxref=EnsemblGenomes-Gn:YE2973,EnsemblGenomes-Tr:CAL13012,GOA:A1JQL5,InterPro:IPR002481,InterPro:IPR011991,UniProtKB/TrEMBL:A1JQL5,NCBI_GP:CAL13012.1;Name=CAL13012.1;gbkey=CDS;gene=fur;product=ferric uptake regulator;protein_id=CAL13012.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3236224	3236586	.	+	.	ID=id5271;Note=Pfam match to entry PF01475 FUR%2C Ferric uptake regulator family%2C score 238.2%2C E-value 7.4e-69;gbkey=misc_feature;gene=fur;inference=protein motif:PFAM:PF01475
AM286415.1	EMBL	gene	3237040	3239715	.	-	.	ID=gene2922;Name=chb;gbkey=Gene;gene=chb;gene_biotype=protein_coding;locus_tag=YE2974
AM286415.1	EMBL	CDS	3237040	3239715	.	-	0	ID=cds2843;Parent=gene2922;Dbxref=EnsemblGenomes-Gn:YE2974,EnsemblGenomes-Tr:CAL13013,GOA:A1JQG5,InterPro:IPR004866,InterPro:IPR004867,InterPro:IPR008965,InterPro:IPR012291,InterPro:IPR013781,InterPro:IPR013812,InterPro:IPR014756,InterPro:IPR015882,InterPro:IPR015883,InterPro:IPR017853,InterPro:IPR025705,InterPro:IPR029018,UniProtKB/TrEMBL:A1JQG5,NCBI_GP:CAL13013.1;Name=CAL13013.1;Note=Similar to Serratia marcescens chitobiase precursor Chb SWALL:CHB_SERMA (SWALL:Q54468) (885 aa) fasta scores: E(): 0%2C 76.48 38d in 889 aa%2C and to Enterobacter sp N-acetyl-beta-D-glucosaminidase Nag1 SWALL:Q9ZN69 (EMBL:AB022786) (885 aa) fasta scores: E(): 0%2C 76.37 38d in 889 aa;gbkey=CDS;gene=chb;inference=similar to sequence:UniProtKB:Q54468;product=chitobiase precursor;protein_id=CAL13013.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3237049	3237249	.	-	.	ID=id5272;Note=Pfam match to entry PF03174 CHB_HEX_C%2CChitobiase/beta-hexosaminidase C-terminal domain%2C score 126.2%2C E-value 4e-35;gbkey=misc_feature;gene=chb;inference=protein motif:PFAM:PF03174
AM286415.1	EMBL	sequence_feature	3237403	3238704	.	-	.	ID=id5273;Note=Pfam match to entry PF00728 Glyco_hydro_20%2CGlycosyl hydrolase family 20%2C catalytic domain%2C score 629.8%2C E-value 9.7e-187;gbkey=misc_feature;gene=chb;inference=protein motif:PFAM:PF00728
AM286415.1	EMBL	sequence_feature	3238708	3239115	.	-	.	ID=id5274;Note=Pfam match to entry PF02838 Glyco_hydro_20b%2CGlycosyl hydrolase family 20%2C domain 2%2C score 28.4%2CE-value 6.6e-07;gbkey=misc_feature;gene=chb;inference=protein motif:PFAM:PF02838
AM286415.1	EMBL	sequence_feature	3239125	3239610	.	-	.	ID=id5275;Note=Pfam match to entry PF03173 CHB_HEX%2C Putative carbohydrate binding domain%2C score 303.2%2C E-value 2.1e-88;gbkey=misc_feature;gene=chb;inference=protein motif:PFAM:PF03173
AM286415.1	EMBL	gene	3239808	3240134	.	-	.	ID=gene2923;Name=YE2975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2975
AM286415.1	EMBL	CDS	3239808	3240134	.	-	0	ID=cds2844;Parent=gene2923;Dbxref=EnsemblGenomes-Gn:YE2975,EnsemblGenomes-Tr:CAL13014,InterPro:IPR025727,UniProtKB/TrEMBL:A1JQG7,NCBI_GP:CAL13014.1;Name=CAL13014.1;Note=Similar to Salmonella typhi putative lipoprotein STY0726 SWALL:Q8Z8F7 (EMBL:AL627267) (110 aa) fasta scores: E(): 4e-23%2C 58.33 38d in 108 aa%2C and to Salmonella typhimurium putative lipoprotein STM0688 SWALL:Q8ZQX4 (EMBL:AE008727) (110 aa) fasta scores: E(): 4.6e-23%2C58.33 38d in 108 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627267;product=putative lipoprotein;protein_id=CAL13014.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3240084	3240116	.	-	.	ID=id5276;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3240195	3241598	.	-	.	ID=gene2924;Name=ybfM;gbkey=Gene;gene=ybfM;gene_biotype=protein_coding;locus_tag=YE2976
AM286415.1	EMBL	CDS	3240195	3241598	.	-	0	ID=cds2845;Parent=gene2924;Dbxref=EnsemblGenomes-Gn:YE2976,EnsemblGenomes-Tr:CAL13015,GOA:A1JQG9,InterPro:IPR005318,InterPro:IPR023614,UniProtKB/TrEMBL:A1JQG9,NCBI_GP:CAL13015.1;Name=CAL13015.1;gbkey=CDS;gene=ybfM;product=putative exported protein;protein_id=CAL13015.1;transl_table=11
AM286415.1	EMBL	gene	3242234	3243901	.	-	.	ID=gene2925;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=YE2977
AM286415.1	EMBL	CDS	3242234	3243901	.	-	0	ID=cds2846;Parent=gene2925;Dbxref=EnsemblGenomes-Gn:YE2977,EnsemblGenomes-Tr:CAL13016,GOA:A1JQH0,InterPro:IPR000924,InterPro:IPR001412,InterPro:IPR004514,InterPro:IPR011035,InterPro:IPR014729,InterPro:IPR020056,InterPro:IPR020058,InterPro:IPR020059,InterPro:IPR020061,InterPro:IPR022861,NCBI_GP:CAL13016.1;Name=CAL13016.1;gbkey=CDS;gene=glnS;product=glutaminyl-tRNA synthetase;protein_id=CAL13016.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3242318	3242884	.	-	.	ID=id5277;Note=Pfam match to entry PF03950 tRNA-synt_1c_C%2C tRNA synthetases class I (E and Q)%2C anti-codon binding domain %2Cscore 350.3%2C E-value 1.4e-102;gbkey=misc_feature;gene=glnS;inference=protein motif:PFAM:PF03950
AM286415.1	EMBL	sequence_feature	3242888	3243823	.	-	.	ID=id5278;Note=Pfam match to entry PF00749 tRNA-synt_1c%2C tRNA synthetases class I (E and Q)%2C catalytic domain%2C score 620.5%2C E-value 6.5e-184;gbkey=misc_feature;gene=glnS;inference=protein motif:PFAM:PF00749
AM286415.1	EMBL	sequence_feature	3243767	3243802	.	-	.	ID=id5279;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=glnS;inference=protein motif:Prosite:PS00178
AM286415.1	EMBL	gene	3244095	3246128	.	-	.	ID=gene2926;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;gene_synonym=pstN;locus_tag=YE2978
AM286415.1	EMBL	CDS	3244095	3246128	.	-	0	ID=cds2847;Parent=gene2926;Dbxref=EnsemblGenomes-Gn:YE2978,EnsemblGenomes-Tr:CAL13017,GOA:A1JQH2,InterPro:IPR001127,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR010974,InterPro:IPR011055,InterPro:IPR013013,InterPro:IPR018113,UniProtKB/TrEMBL:A1JQH2,NCBI_GP:CAL13017.1;Name=CAL13017.1;gbkey=CDS;gene=nagE;product=pts system%2C N-acetylglucosamine-specific IIABC component;protein_id=CAL13017.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3244182	3244496	.	-	.	ID=id5280;Note=Pfam match to entry PF00358 PTS_EIIA_1%2Cphosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 1%2C score 221.9%2C E-value 6.2e-64;gbkey=misc_feature;gene=nagE;inference=protein motif:PFAM:PF00358
AM286415.1	EMBL	sequence_feature	3244320	3244358	.	-	.	ID=id5281;Note=PS00371 PTS EIIA domains phosphorylation site signature 1.;gbkey=misc_feature;gene=nagE;inference=protein motif:Prosite:PS00371
AM286415.1	EMBL	sequence_feature	3244758	3244862	.	-	.	ID=id5282;Note=Pfam match to entry PF00367 PTS_EIIB%2Cphosphotransferase system%2C EIIB%2C score 60.2%2C E-value 2.9e-15;gbkey=misc_feature;gene=nagE;inference=protein motif:PFAM:PF00367
AM286415.1	EMBL	sequence_feature	3244773	3244826	.	-	.	ID=id5283;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;gene=nagE;inference=protein motif:Prosite:PS01035
AM286415.1	EMBL	sequence_feature	3246027	3246095	.	-	.	ID=id5284;Note=9 probable transmembrane helices predicted for YE2978 by TMHMM2.0 at aa 12-34%2C 49-71%2C 78-100%2C 157-179%2C192-214%2C 255-277%2C 284-306%2C 321-343 and 356-378;gbkey=misc_feature;gene=nagE;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3245916	3245984	.	-	.	ID=id5284;Note=9 probable transmembrane helices predicted for YE2978 by TMHMM2.0 at aa 12-34%2C 49-71%2C 78-100%2C 157-179%2C192-214%2C 255-277%2C 284-306%2C 321-343 and 356-378;gbkey=misc_feature;gene=nagE;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3245829	3245897	.	-	.	ID=id5284;Note=9 probable transmembrane helices predicted for YE2978 by TMHMM2.0 at aa 12-34%2C 49-71%2C 78-100%2C 157-179%2C192-214%2C 255-277%2C 284-306%2C 321-343 and 356-378;gbkey=misc_feature;gene=nagE;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3245592	3245660	.	-	.	ID=id5284;Note=9 probable transmembrane helices predicted for YE2978 by TMHMM2.0 at aa 12-34%2C 49-71%2C 78-100%2C 157-179%2C192-214%2C 255-277%2C 284-306%2C 321-343 and 356-378;gbkey=misc_feature;gene=nagE;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3245487	3245555	.	-	.	ID=id5284;Note=9 probable transmembrane helices predicted for YE2978 by TMHMM2.0 at aa 12-34%2C 49-71%2C 78-100%2C 157-179%2C192-214%2C 255-277%2C 284-306%2C 321-343 and 356-378;gbkey=misc_feature;gene=nagE;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3245298	3245366	.	-	.	ID=id5284;Note=9 probable transmembrane helices predicted for YE2978 by TMHMM2.0 at aa 12-34%2C 49-71%2C 78-100%2C 157-179%2C192-214%2C 255-277%2C 284-306%2C 321-343 and 356-378;gbkey=misc_feature;gene=nagE;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3245211	3245279	.	-	.	ID=id5284;Note=9 probable transmembrane helices predicted for YE2978 by TMHMM2.0 at aa 12-34%2C 49-71%2C 78-100%2C 157-179%2C192-214%2C 255-277%2C 284-306%2C 321-343 and 356-378;gbkey=misc_feature;gene=nagE;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3245100	3245168	.	-	.	ID=id5284;Note=9 probable transmembrane helices predicted for YE2978 by TMHMM2.0 at aa 12-34%2C 49-71%2C 78-100%2C 157-179%2C192-214%2C 255-277%2C 284-306%2C 321-343 and 356-378;gbkey=misc_feature;gene=nagE;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3244995	3245063	.	-	.	ID=id5284;Note=9 probable transmembrane helices predicted for YE2978 by TMHMM2.0 at aa 12-34%2C 49-71%2C 78-100%2C 157-179%2C192-214%2C 255-277%2C 284-306%2C 321-343 and 356-378;gbkey=misc_feature;gene=nagE;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	3245157	3246098	.	-	.	ID=id5285;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 396.2%2C E-value 2e-116;gbkey=misc_feature;gene=nagE;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	gene	3246499	3247299	.	+	.	ID=gene2927;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;gene_synonym=glmD;locus_tag=YE2979
AM286415.1	EMBL	CDS	3246499	3247299	.	+	0	ID=cds2848;Parent=gene2927;Dbxref=EnsemblGenomes-Gn:YE2979,EnsemblGenomes-Tr:CAL13018,GOA:A1JQE8,InterPro:IPR004547,InterPro:IPR006148,InterPro:IPR018321,NCBI_GP:CAL13018.1;Name=CAL13018.1;gbkey=CDS;gene=nagB;product=putative glucosamine-6-phosphate isomerase;protein_id=CAL13018.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3246541	3247248	.	+	.	ID=id5286;Note=Pfam match to entry PF01182 Glucosamine_iso%2CGlucosamine-6-phosphate isomerases/6-phosphogluconolactonase%2C score 555.7%2CE-value 2.1e-164;gbkey=misc_feature;gene=nagB;inference=protein motif:PFAM:PF01182
AM286415.1	EMBL	sequence_feature	3246871	3246927	.	+	.	ID=id5287;Note=PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature.;gbkey=misc_feature;gene=nagB;inference=protein motif:Prosite:PS01161
AM286415.1	EMBL	sequence_feature	3247150	3247182	.	+	.	ID=id5288;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nagB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3247319	3248464	.	+	.	ID=gene2928;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=YE2980
AM286415.1	EMBL	CDS	3247319	3248464	.	+	0	ID=cds2849;Parent=gene2928;Dbxref=EnsemblGenomes-Gn:YE2980,EnsemblGenomes-Tr:CAL13019,GOA:A1JQE9,InterPro:IPR003764,InterPro:IPR006680,InterPro:IPR011059,UniProtKB/TrEMBL:A1JQE9,NCBI_GP:CAL13019.1;Name=CAL13019.1;gbkey=CDS;gene=nagA;product=putative N-acetylglucosamine-6-phosphate deacetylase;protein_id=CAL13019.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3247961	3248461	.	+	.	ID=id5289;Note=Pfam match to entry PF02612 NagA%2CN-acetylglucosamine-6-phosphate deacetylase%2C score 335.4%2CE-value 4.3e-98;gbkey=misc_feature;gene=nagA;inference=protein motif:PFAM:PF02612
AM286415.1	EMBL	gene	3248478	3249701	.	+	.	ID=gene2929;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=YE2981
AM286415.1	EMBL	CDS	3248478	3249701	.	+	0	ID=cds2850;Parent=gene2929;Dbxref=EnsemblGenomes-Gn:YE2981,EnsemblGenomes-Tr:CAL13020,GOA:A1JQF0,InterPro:IPR000600,InterPro:IPR000835,InterPro:IPR011991,UniProtKB/TrEMBL:A1JQF0,NCBI_GP:CAL13020.1;Name=CAL13020.1;gbkey=CDS;gene=nagC;product=putative N-acetylglucosamine regulatory protein;protein_id=CAL13020.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3248748	3249302	.	+	.	ID=id5290;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 259.7%2C E-value 2.5e-75;gbkey=misc_feature;gene=nagC;inference=protein motif:PFAM:PF00480
AM286415.1	EMBL	sequence_feature	3249138	3249221	.	+	.	ID=id5291;Note=PS01125 ROK family signature.;gbkey=misc_feature;gene=nagC;inference=protein motif:Prosite:PS01125
AM286415.1	EMBL	gene	3249912	3250664	.	+	.	ID=gene2930;Name=nagD;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=YE2982
AM286415.1	EMBL	CDS	3249912	3250664	.	+	0	ID=cds2851;Parent=gene2930;Dbxref=EnsemblGenomes-Gn:YE2982,EnsemblGenomes-Tr:CAL13021,InterPro:IPR006357,InterPro:IPR023214,InterPro:IPR023215,UniProtKB/TrEMBL:A1JQF2,NCBI_GP:CAL13021.1;Name=CAL13021.1;gbkey=CDS;gene=nagD;product=putative N-acetylglucosamine metabolism protein;protein_id=CAL13021.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3249918	3250580	.	+	.	ID=id5292;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 56.2%2C E-value 4.7e-14;gbkey=misc_feature;gene=nagD;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	3251009	3252673	.	+	.	ID=gene2931;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=YE2983
AM286415.1	EMBL	CDS	3251009	3252673	.	+	0	ID=cds2852;Parent=gene2931;Dbxref=EnsemblGenomes-Gn:YE2983,EnsemblGenomes-Tr:CAL13022,GOA:A1JQ99,InterPro:IPR000583,InterPro:IPR001962,InterPro:IPR006426,InterPro:IPR014729,InterPro:IPR017932,InterPro:IPR029055,UniProtKB/TrEMBL:A1JQ99,NCBI_GP:CAL13022.1;Name=CAL13022.1;gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=CAL13022.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3251009	3251026	.	+	.	ID=id5293;Note=PS00443 Glutamine amidotransferases class-II active site.;gbkey=misc_feature;gene=asnB;inference=protein motif:Prosite:PS00443
AM286415.1	EMBL	sequence_feature	3251012	3251455	.	+	.	ID=id5294;Note=Pfam match to entry PF00310 GATase_2%2C Glutamine amidotransferases class-II%2C score 207.6%2C E-value 1.2e-59;gbkey=misc_feature;gene=asnB;inference=protein motif:PFAM:PF00310
AM286415.1	EMBL	sequence_feature	3251588	3252556	.	+	.	ID=id5295;Note=Pfam match to entry PF00733 Asn_synthase%2CAsparagine synthase%2C score 661.9%2C E-value 2.1e-196;gbkey=misc_feature;gene=asnB;inference=protein motif:PFAM:PF00733
AM286415.1	EMBL	gene	3252927	3253003	.	+	.	ID=gene2932;Name=tRNA-Met (CAT);gbkey=Gene;gene=tRNA-Met (CAT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3252927	3253003	.	+	.	ID=rna106;Parent=gene2932;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	exon	3252927	3253003	.	+	.	ID=id5296;Parent=rna106;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	gene	3253019	3253103	.	+	.	ID=gene2933;Name=tRNA-Leu (TAG);gbkey=Gene;gene=tRNA-Leu (TAG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3253019	3253103	.	+	.	ID=rna107;Parent=gene2933;gbkey=tRNA;gene=tRNA-Leu (TAG);product=tRNA-Leu
AM286415.1	EMBL	exon	3253019	3253103	.	+	.	ID=id5297;Parent=rna107;gbkey=tRNA;gene=tRNA-Leu (TAG);product=tRNA-Leu
AM286415.1	EMBL	gene	3253127	3253201	.	+	.	ID=gene2934;Name=tRNA-Gln (TTG);gbkey=Gene;gene=tRNA-Gln (TTG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3253127	3253201	.	+	.	ID=rna108;Parent=gene2934;gbkey=tRNA;gene=tRNA-Gln (TTG);product=tRNA-Gln
AM286415.1	EMBL	exon	3253127	3253201	.	+	.	ID=id5298;Parent=rna108;gbkey=tRNA;gene=tRNA-Gln (TTG);product=tRNA-Gln
AM286415.1	EMBL	gene	3253325	3253399	.	+	.	ID=gene2935;Name=tRNA-Gln (TTG);gbkey=Gene;gene=tRNA-Gln (TTG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3253325	3253399	.	+	.	ID=rna109;Parent=gene2935;gbkey=tRNA;gene=tRNA-Gln (TTG);product=tRNA-Gln
AM286415.1	EMBL	exon	3253325	3253399	.	+	.	ID=id5299;Parent=rna109;gbkey=tRNA;gene=tRNA-Gln (TTG);product=tRNA-Gln
AM286415.1	EMBL	gene	3253431	3253507	.	+	.	ID=gene2936;Name=tRNA-Met (CAT);gbkey=Gene;gene=tRNA-Met (CAT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3253431	3253507	.	+	.	ID=rna110;Parent=gene2936;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	exon	3253431	3253507	.	+	.	ID=id5300;Parent=rna110;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	gene	3253513	3253587	.	+	.	ID=gene2937;Name=tRNA-Gln (CTG);gbkey=Gene;gene=tRNA-Gln (CTG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3253513	3253587	.	+	.	ID=rna111;Parent=gene2937;gbkey=tRNA;gene=tRNA-Gln (CTG);product=tRNA-Gln
AM286415.1	EMBL	exon	3253513	3253587	.	+	.	ID=id5301;Parent=rna111;gbkey=tRNA;gene=tRNA-Gln (CTG);product=tRNA-Gln
AM286415.1	EMBL	gene	3253760	3254941	.	-	.	ID=gene2938;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=YE2984
AM286415.1	EMBL	CDS	3253760	3254941	.	-	0	ID=cds2853;Parent=gene2938;Dbxref=EnsemblGenomes-Gn:YE2984,EnsemblGenomes-Tr:CAL13023,GOA:A1JQA2,InterPro:IPR002938,InterPro:IPR003042,InterPro:IPR010971,UniProtKB/TrEMBL:A1JQA2,NCBI_GP:CAL13023.1;Name=CAL13023.1;gbkey=CDS;gene=ubiF;product=putative 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=CAL13023.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3253886	3254467	.	-	.	ID=id5302;Note=Pfam match to entry PF01360 Monooxygenase%2CMonooxygenase%2C score 129.3%2C E-value 4.7e-36;gbkey=misc_feature;gene=ubiF;inference=protein motif:PFAM:PF01360
AM286415.1	EMBL	sequence_feature	3254840	3254908	.	-	.	ID=id5303;Note=1 probable transmembrane helix predicted for YE2984 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;gene=ubiF;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3255184	3256608	.	+	.	ID=gene2939;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=YE2985
AM286415.1	EMBL	CDS	3255184	3256608	.	+	0	ID=cds2854;Parent=gene2939;Dbxref=EnsemblGenomes-Gn:YE2985,EnsemblGenomes-Tr:CAL13024,GOA:A1JQA3,InterPro:IPR002792,InterPro:IPR005839,InterPro:IPR006463,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR013848,InterPro:IPR020612,InterPro:IPR023404,InterPro:IPR023970,NCBI_GP:CAL13024.1;Name=CAL13024.1;gbkey=CDS;gene=miaB;product=putative tRNA-thiotransferase;protein_id=CAL13024.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3255193	3255495	.	+	.	ID=id5304;Note=Pfam match to entry PF00919 UPF0004%2CUncharacterized protein family UPF0004%2C score 175.5%2CE-value 5.7e-50;gbkey=misc_feature;gene=miaB;inference=protein motif:PFAM:PF00919
AM286415.1	EMBL	sequence_feature	3255634	3255696	.	+	.	ID=id5305;Note=PS01278 Uncharacterized protein family UPF0004 signature.;gbkey=misc_feature;gene=miaB;inference=protein motif:Prosite:PS01278
AM286415.1	EMBL	sequence_feature	3256315	3256506	.	+	.	ID=id5306;Note=Pfam match to entry PF01938 TRAM%2C TRAM domain %2Cscore 82.0%2C E-value 8.1e-22;gbkey=misc_feature;gene=miaB;inference=protein motif:PFAM:PF01938
AM286415.1	EMBL	gene	3256887	3257978	.	+	.	ID=gene2940;Name=YE2986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2986
AM286415.1	EMBL	CDS	3256887	3257978	.	+	0	ID=cds2855;Parent=gene2940;Dbxref=EnsemblGenomes-Gn:YE2986,EnsemblGenomes-Tr:CAL13025,GOA:A1JQ73,InterPro:IPR003714,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ73,NCBI_GP:CAL13025.1;Name=CAL13025.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13025.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3256923	3257885	.	+	.	ID=id5307;Note=Pfam match to entry PF02562 PhoH%2C PhoH-like protein%2C score 722.4%2C E-value 1.3e-214;gbkey=misc_feature;inference=protein motif:PFAM:PF02562
AM286415.1	EMBL	sequence_feature	3257346	3257369	.	+	.	ID=id5308;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3257975	3258448	.	+	.	ID=gene2941;Name=YE2987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2987
AM286415.1	EMBL	CDS	3257975	3258448	.	+	0	ID=cds2856;Parent=gene2941;Dbxref=EnsemblGenomes-Gn:YE2987,EnsemblGenomes-Tr:CAL13026,GOA:A1JQ74,InterPro:IPR002036,InterPro:IPR020549,InterPro:IPR023091,NCBI_GP:CAL13026.1;Name=CAL13026.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13026.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3258110	3258385	.	+	.	ID=id5309;Note=Pfam match to entry PF02130 UPF0054%2CUncharacterized protein family UPF0054%2C score 180.9%2CE-value 1.4e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF02130
AM286415.1	EMBL	sequence_feature	3258314	3258346	.	+	.	ID=id5310;Note=PS01306 Uncharacterized protein family UPF0054 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01306
AM286415.1	EMBL	gene	3258563	3259441	.	+	.	ID=gene2942;Name=ybeX;gbkey=Gene;gene=ybeX;gene_biotype=protein_coding;locus_tag=YE2988
AM286415.1	EMBL	CDS	3258563	3259441	.	+	0	ID=cds2857;Parent=gene2942;Dbxref=EnsemblGenomes-Gn:YE2988,EnsemblGenomes-Tr:CAL13027,GOA:A1JQ75,InterPro:IPR000644,InterPro:IPR005170,InterPro:IPR016166,InterPro:IPR016169,UniProtKB/TrEMBL:A1JQ75,NCBI_GP:CAL13027.1;Name=CAL13027.1;gbkey=CDS;gene=ybeX;product=putative membrane protein;protein_id=CAL13027.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3258779	3258943	.	+	.	ID=id5311;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 46.0%2C E-value 5.3e-11;gbkey=misc_feature;gene=ybeX;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	3258968	3259129	.	+	.	ID=id5312;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 40.3%2C E-value 2.8e-09;gbkey=misc_feature;gene=ybeX;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	3259175	3259411	.	+	.	ID=id5313;Note=Pfam match to entry PF03471 CorC_HlyC%2C Transporter associated domain%2C score 127.0%2C E-value 2.2e-35;gbkey=misc_feature;gene=ybeX;inference=protein motif:PFAM:PF03471
AM286415.1	EMBL	gene	3259449	3261026	.	+	.	ID=gene2943;Name=cutE;gbkey=Gene;gene=cutE;gene_biotype=protein_coding;gene_synonym=lnt;locus_tag=YE2989
AM286415.1	EMBL	CDS	3259449	3261026	.	+	0	ID=cds2858;Parent=gene2943;Dbxref=EnsemblGenomes-Gn:YE2989,EnsemblGenomes-Tr:CAL13028,GOA:A1JQ76,InterPro:IPR003010,InterPro:IPR004563,UniProtKB/TrEMBL:A1JQ76,NCBI_GP:CAL13028.1;Name=CAL13028.1;gbkey=CDS;gene=cutE;product=putative apolipoprotein N-acyltransferase;protein_id=CAL13028.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3259482	3259535	.	+	.	ID=id5314;Note=8 probable transmembrane helices predicted for YE2989 by TMHMM2.0 at aa 12-29%2C 33-50%2C 57-79%2C 89-111%2C124-143%2C 163-185%2C 192-209 and 489-508;gbkey=misc_feature;gene=cutE;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3259545	3259598	.	+	.	ID=id5314;Note=8 probable transmembrane helices predicted for YE2989 by TMHMM2.0 at aa 12-29%2C 33-50%2C 57-79%2C 89-111%2C124-143%2C 163-185%2C 192-209 and 489-508;gbkey=misc_feature;gene=cutE;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3259617	3259685	.	+	.	ID=id5314;Note=8 probable transmembrane helices predicted for YE2989 by TMHMM2.0 at aa 12-29%2C 33-50%2C 57-79%2C 89-111%2C124-143%2C 163-185%2C 192-209 and 489-508;gbkey=misc_feature;gene=cutE;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3259713	3259781	.	+	.	ID=id5314;Note=8 probable transmembrane helices predicted for YE2989 by TMHMM2.0 at aa 12-29%2C 33-50%2C 57-79%2C 89-111%2C124-143%2C 163-185%2C 192-209 and 489-508;gbkey=misc_feature;gene=cutE;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3259818	3259877	.	+	.	ID=id5314;Note=8 probable transmembrane helices predicted for YE2989 by TMHMM2.0 at aa 12-29%2C 33-50%2C 57-79%2C 89-111%2C124-143%2C 163-185%2C 192-209 and 489-508;gbkey=misc_feature;gene=cutE;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3259935	3260003	.	+	.	ID=id5314;Note=8 probable transmembrane helices predicted for YE2989 by TMHMM2.0 at aa 12-29%2C 33-50%2C 57-79%2C 89-111%2C124-143%2C 163-185%2C 192-209 and 489-508;gbkey=misc_feature;gene=cutE;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3260022	3260075	.	+	.	ID=id5314;Note=8 probable transmembrane helices predicted for YE2989 by TMHMM2.0 at aa 12-29%2C 33-50%2C 57-79%2C 89-111%2C124-143%2C 163-185%2C 192-209 and 489-508;gbkey=misc_feature;gene=cutE;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3260913	3260972	.	+	.	ID=id5314;Note=8 probable transmembrane helices predicted for YE2989 by TMHMM2.0 at aa 12-29%2C 33-50%2C 57-79%2C 89-111%2C124-143%2C 163-185%2C 192-209 and 489-508;gbkey=misc_feature;gene=cutE;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	3259977	3260009	.	+	.	ID=id5315;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cutE;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3261035	3261619	.	+	.	ID=gene2944;Name=YE2990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2990
AM286415.1	EMBL	CDS	3261035	3261619	.	+	0	ID=cds2859;Parent=gene2944;Dbxref=EnsemblGenomes-Gn:YE2990,EnsemblGenomes-Tr:CAL13029,GOA:A1JQ78,InterPro:IPR011576,InterPro:IPR012349,InterPro:IPR024029,UniProtKB/TrEMBL:A1JQ78,NCBI_GP:CAL13029.1;Name=CAL13029.1;Note=Similar to Rhizobium loti hypothetical protein MLL0539 SWALL:Q98MK8 (EMBL:AP002995) (203 aa) fasta scores: E(): 5.2e-31%2C 46.89 38d in 177 aa%2C and to Caulobacter crescentus hypothetical protein CC2577 SWALL:Q9A580 (EMBL:AE005926) (204 aa) fasta scores: E(): 7.7e-27%2C 44.11 38d in 170 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP002995;product=conserved hypothetical protein;protein_id=CAL13029.1;transl_table=11
AM286415.1	EMBL	gene	3262206	3263120	.	+	.	ID=gene2945;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=YE2991
AM286415.1	EMBL	CDS	3262206	3263120	.	+	0	ID=cds2860;Parent=gene2945;Dbxref=EnsemblGenomes-Gn:YE2991,EnsemblGenomes-Tr:CAL13030,GOA:A1JQ18,InterPro:IPR001638,UniProtKB/TrEMBL:A1JQ18,NCBI_GP:CAL13030.1;Name=CAL13030.1;gbkey=CDS;gene=glnH;product=putative amino acid-binding protein precursor;protein_id=CAL13030.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3262335	3263027	.	+	.	ID=id5316;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 194.7%2C E-value 9.4e-56;gbkey=misc_feature;gene=glnH;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	gene	3263298	3264038	.	+	.	ID=gene2946;Name=gltJ;gbkey=Gene;gene=gltJ;gene_biotype=protein_coding;locus_tag=YE2992
AM286415.1	EMBL	CDS	3263298	3264038	.	+	0	ID=cds2861;Parent=gene2946;Dbxref=EnsemblGenomes-Gn:YE2992,EnsemblGenomes-Tr:CAL13031,GOA:A1JQ19,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JQ19,NCBI_GP:CAL13031.1;Name=CAL13031.1;gbkey=CDS;gene=gltJ;product=putative glutamate/aspartate transport system permease;protein_id=CAL13031.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3263388	3263456	.	+	.	ID=id5317;Note=4 probable transmembrane helices predicted for YE2992 by TMHMM2.0 at aa 31-53%2C 66-88%2C 108-127 and 211-233;gbkey=misc_feature;gene=gltJ;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3263493	3263561	.	+	.	ID=id5317;Note=4 probable transmembrane helices predicted for YE2992 by TMHMM2.0 at aa 31-53%2C 66-88%2C 108-127 and 211-233;gbkey=misc_feature;gene=gltJ;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3263619	3263678	.	+	.	ID=id5317;Note=4 probable transmembrane helices predicted for YE2992 by TMHMM2.0 at aa 31-53%2C 66-88%2C 108-127 and 211-233;gbkey=misc_feature;gene=gltJ;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3263928	3263996	.	+	.	ID=id5317;Note=4 probable transmembrane helices predicted for YE2992 by TMHMM2.0 at aa 31-53%2C 66-88%2C 108-127 and 211-233;gbkey=misc_feature;gene=gltJ;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3263694	3263915	.	+	.	ID=id5318;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 71.6%2C E-value 1.1e-18;gbkey=misc_feature;gene=gltJ;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	3264038	3264712	.	+	.	ID=gene2947;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=YE2993
AM286415.1	EMBL	CDS	3264038	3264712	.	+	0	ID=cds2862;Parent=gene2947;Dbxref=EnsemblGenomes-Gn:YE2993,EnsemblGenomes-Tr:CAL13032,GOA:A1JQ21,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JQ21,NCBI_GP:CAL13032.1;Name=CAL13032.1;gbkey=CDS;gene=gltK;product=putative glutamate/aspartate transport system permease;protein_id=CAL13032.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3264080	3264148	.	+	.	ID=id5319;Note=5 probable transmembrane helices predicted for YE2993 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-112%2C 155-177 and 197-219;gbkey=misc_feature;gene=gltK;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3264209	3264277	.	+	.	ID=id5319;Note=5 probable transmembrane helices predicted for YE2993 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-112%2C 155-177 and 197-219;gbkey=misc_feature;gene=gltK;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3264320	3264373	.	+	.	ID=id5319;Note=5 probable transmembrane helices predicted for YE2993 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-112%2C 155-177 and 197-219;gbkey=misc_feature;gene=gltK;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3264500	3264568	.	+	.	ID=id5319;Note=5 probable transmembrane helices predicted for YE2993 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-112%2C 155-177 and 197-219;gbkey=misc_feature;gene=gltK;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3264626	3264694	.	+	.	ID=id5319;Note=5 probable transmembrane helices predicted for YE2993 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-112%2C 155-177 and 197-219;gbkey=misc_feature;gene=gltK;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	3264392	3264625	.	+	.	ID=id5320;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 80.7%2C E-value 2e-21;gbkey=misc_feature;gene=gltK;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	3264709	3265437	.	+	.	ID=gene2948;Name=gltL;gbkey=Gene;gene=gltL;gene_biotype=protein_coding;locus_tag=YE2994
AM286415.1	EMBL	CDS	3264709	3265437	.	+	0	ID=cds2863;Parent=gene2948;Dbxref=EnsemblGenomes-Gn:YE2994,EnsemblGenomes-Tr:CAL13033,GOA:A1JQ22,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ22,NCBI_GP:CAL13033.1;Name=CAL13033.1;gbkey=CDS;gene=gltL;product=putative glutamate/aspartate transport ATP-binding protein;protein_id=CAL13033.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3264790	3265347	.	+	.	ID=id5321;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 222.1%2C E-value 5.2e-64;gbkey=misc_feature;gene=gltL;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3264811	3264834	.	+	.	ID=id5322;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=gltL;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3265120	3265164	.	+	.	ID=id5323;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=gltL;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	3265493	3265975	.	-	.	ID=gene2949;Name=YE2995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE2995
AM286415.1	EMBL	CDS	3265493	3265975	.	-	0	ID=cds2864;Parent=gene2949;Dbxref=EnsemblGenomes-Gn:YE2995,EnsemblGenomes-Tr:CAL13034,InterPro:IPR009912,UniProtKB/TrEMBL:A1JQ24,NCBI_GP:CAL13034.1;Name=CAL13034.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13034.1;transl_table=11
AM286415.1	EMBL	gene	3266354	3268936	.	+	.	ID=gene2950;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=YE2996
AM286415.1	EMBL	CDS	3266354	3268936	.	+	0	ID=cds2865;Parent=gene2950;Dbxref=EnsemblGenomes-Gn:YE2996,EnsemblGenomes-Tr:CAL13035,GOA:A1JQ25,InterPro:IPR001412,InterPro:IPR002300,InterPro:IPR002302,InterPro:IPR009008,InterPro:IPR009080,InterPro:IPR013155,InterPro:IPR014729,InterPro:IPR025709,NCBI_GP:CAL13035.1;Name=CAL13035.1;gbkey=CDS;gene=leuS;product=leucyl-tRNA synthetase;protein_id=CAL13035.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3266390	3268330	.	+	.	ID=id5324;Note=Pfam match to entry PF00133 tRNA-synt_1%2C tRNA synthetases class I (I%2C L%2C M and V)%2C score 920.5%2C E-value 3e-274;gbkey=misc_feature;gene=leuS;inference=protein motif:PFAM:PF00133
AM286415.1	EMBL	sequence_feature	3266477	3266512	.	+	.	ID=id5325;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=leuS;inference=protein motif:Prosite:PS00178
AM286415.1	EMBL	gene	3268951	3269574	.	+	.	ID=gene2951;Name=rlpB;gbkey=Gene;gene=rlpB;gene_biotype=protein_coding;locus_tag=YE2997
AM286415.1	EMBL	CDS	3268951	3269574	.	+	0	ID=cds2866;Parent=gene2951;Dbxref=EnsemblGenomes-Gn:YE2997,EnsemblGenomes-Tr:CAL13036,GOA:A1JQ26,InterPro:IPR007485,NCBI_GP:CAL13036.1;Name=CAL13036.1;gbkey=CDS;gene=rlpB;product=rare lipoprotein B precursor;protein_id=CAL13036.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3268963	3269031	.	+	.	ID=id5326;Note=1 probable transmembrane helix predicted for YE2997 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;gene=rlpB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3268978	3269010	.	+	.	ID=id5327;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=rlpB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3269571	3270605	.	+	.	ID=gene2952;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=YE2998
AM286415.1	EMBL	CDS	3269571	3270605	.	+	0	ID=cds2867;Parent=gene2952;Dbxref=EnsemblGenomes-Gn:YE2998,EnsemblGenomes-Tr:CAL13037,GOA:A1JPW2,InterPro:IPR005790,InterPro:IPR008921,InterPro:IPR010372,InterPro:IPR027417,UniProtKB/TrEMBL:A1JPW2,NCBI_GP:CAL13037.1;Name=CAL13037.1;gbkey=CDS;gene=holA;product=DNA polymerase III%2C delta subunit;protein_id=CAL13037.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3269955	3269987	.	+	.	ID=id5328;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=holA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3270595	3271257	.	+	.	ID=gene2953;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=YE2999
AM286415.1	EMBL	CDS	3270595	3271257	.	+	0	ID=cds2868;Parent=gene2953;Dbxref=EnsemblGenomes-Gn:YE2999,EnsemblGenomes-Tr:CAL13038,GOA:A1JPW3,InterPro:IPR004821,InterPro:IPR005248,InterPro:IPR014729,NCBI_GP:CAL13038.1;Name=CAL13038.1;gbkey=CDS;gene=nadD;product=putative nicotinate-nucleotide adenylyltransferase;protein_id=CAL13038.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3270619	3270675	.	+	.	ID=id5329;Note=Pfam match to entry PF01467 CTP_transf_2%2CCytidylyltransferase%2C score 20.5%2C E-value 2.1e-05;gbkey=misc_feature;gene=nadD;inference=protein motif:PFAM:PF01467
AM286415.1	EMBL	gene	3271557	3271874	.	+	.	ID=gene2954;Name=YE3000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3000
AM286415.1	EMBL	CDS	3271557	3271874	.	+	0	ID=cds2869;Parent=gene2954;Dbxref=EnsemblGenomes-Gn:YE3000,EnsemblGenomes-Tr:CAL13039,GOA:A1JPW4,InterPro:IPR004394,InterPro:IPR025656,UniProtKB/TrEMBL:A1JPW4,NCBI_GP:CAL13039.1;Name=CAL13039.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13039.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3271566	3271871	.	+	.	ID=id5330;Note=Pfam match to entry PF02410 DUF143%2C Domain of unknown function DUF143%2C score 189.5%2C E-value 3.4e-54;gbkey=misc_feature;inference=protein motif:PFAM:PF02410
AM286415.1	EMBL	gene	3271878	3272348	.	+	.	ID=gene2955;Name=YE3001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3001
AM286415.1	EMBL	CDS	3271878	3272348	.	+	0	ID=cds2870;Parent=gene2955;Dbxref=EnsemblGenomes-Gn:YE3001,EnsemblGenomes-Tr:CAL13040,GOA:A1JPW6,InterPro:IPR003742,InterPro:IPR016051,InterPro:IPR029026,InterPro:IPR029028,NCBI_GP:CAL13040.1;Name=CAL13040.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13040.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3271878	3272339	.	+	.	ID=id5331;Note=Pfam match to entry PF02590 DUF163%2C Uncharacterized ACR%2C COG1576%2C score 311.1%2C E-value 8.6e-91;gbkey=misc_feature;inference=protein motif:PFAM:PF02590
AM286415.1	EMBL	gene	3272423	3274318	.	+	.	ID=gene2956;Name=pbpA;gbkey=Gene;gene=pbpA;gene_biotype=protein_coding;gene_synonym=mrdA;locus_tag=YE3002
AM286415.1	EMBL	CDS	3272423	3274318	.	+	0	ID=cds2871;Parent=gene2956;Dbxref=EnsemblGenomes-Gn:YE3002,EnsemblGenomes-Tr:CAL13041,GOA:A1JPW7,InterPro:IPR001460,InterPro:IPR005311,InterPro:IPR012338,InterPro:IPR017790,UniProtKB/TrEMBL:A1JPW7,NCBI_GP:CAL13041.1;Name=CAL13041.1;gbkey=CDS;gene=pbpA;product=penicillin-binding protein 2;protein_id=CAL13041.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3272483	3272551	.	+	.	ID=id5332;Note=1 probable transmembrane helix predicted for YE3002 by TMHMM2.0 at aa 21-43;gbkey=misc_feature;gene=pbpA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3272612	3273145	.	+	.	ID=id5333;Note=Pfam match to entry PF03717 PBP_dimer%2CPenicillin-binding Protein dimerisation domain%2C score 227.4%2C E-value 1.4e-65;gbkey=misc_feature;gene=pbpA;inference=protein motif:PFAM:PF03717
AM286415.1	EMBL	sequence_feature	3273191	3274234	.	+	.	ID=id5334;Note=Pfam match to entry PF00905 Transpeptidase%2CPenicillin binding protein transpeptidase domain%2C score 402.8%2C E-value 2.2e-118;gbkey=misc_feature;gene=pbpA;inference=protein motif:PFAM:PF00905
AM286415.1	EMBL	gene	3274355	3275467	.	+	.	ID=gene2957;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;gene_synonym=mrdB;locus_tag=YE3003
AM286415.1	EMBL	CDS	3274355	3275467	.	+	0	ID=cds2872;Parent=gene2957;Dbxref=EnsemblGenomes-Gn:YE3003,EnsemblGenomes-Tr:CAL13042,GOA:A1JPW8,InterPro:IPR001182,InterPro:IPR011923,InterPro:IPR018365,UniProtKB/TrEMBL:A1JPW8,NCBI_GP:CAL13042.1;Name=CAL13042.1;gbkey=CDS;gene=rodA;product=rod shape-determining protein;protein_id=CAL13042.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3274397	3274465	.	+	.	ID=id5335;Note=9 probable transmembrane helices predicted for YE3003 by TMHMM2.0 at aa 15-37%2C 50-67%2C 77-99%2C 136-155%2C160-177%2C 184-206%2C 272-294%2C 306-328 and 338-360;gbkey=misc_feature;gene=rodA;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3274502	3274555	.	+	.	ID=id5335;Note=9 probable transmembrane helices predicted for YE3003 by TMHMM2.0 at aa 15-37%2C 50-67%2C 77-99%2C 136-155%2C160-177%2C 184-206%2C 272-294%2C 306-328 and 338-360;gbkey=misc_feature;gene=rodA;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3274583	3274651	.	+	.	ID=id5335;Note=9 probable transmembrane helices predicted for YE3003 by TMHMM2.0 at aa 15-37%2C 50-67%2C 77-99%2C 136-155%2C160-177%2C 184-206%2C 272-294%2C 306-328 and 338-360;gbkey=misc_feature;gene=rodA;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3274760	3274819	.	+	.	ID=id5335;Note=9 probable transmembrane helices predicted for YE3003 by TMHMM2.0 at aa 15-37%2C 50-67%2C 77-99%2C 136-155%2C160-177%2C 184-206%2C 272-294%2C 306-328 and 338-360;gbkey=misc_feature;gene=rodA;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3274832	3274885	.	+	.	ID=id5335;Note=9 probable transmembrane helices predicted for YE3003 by TMHMM2.0 at aa 15-37%2C 50-67%2C 77-99%2C 136-155%2C160-177%2C 184-206%2C 272-294%2C 306-328 and 338-360;gbkey=misc_feature;gene=rodA;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3274904	3274972	.	+	.	ID=id5335;Note=9 probable transmembrane helices predicted for YE3003 by TMHMM2.0 at aa 15-37%2C 50-67%2C 77-99%2C 136-155%2C160-177%2C 184-206%2C 272-294%2C 306-328 and 338-360;gbkey=misc_feature;gene=rodA;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3275168	3275236	.	+	.	ID=id5335;Note=9 probable transmembrane helices predicted for YE3003 by TMHMM2.0 at aa 15-37%2C 50-67%2C 77-99%2C 136-155%2C160-177%2C 184-206%2C 272-294%2C 306-328 and 338-360;gbkey=misc_feature;gene=rodA;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3275270	3275338	.	+	.	ID=id5335;Note=9 probable transmembrane helices predicted for YE3003 by TMHMM2.0 at aa 15-37%2C 50-67%2C 77-99%2C 136-155%2C160-177%2C 184-206%2C 272-294%2C 306-328 and 338-360;gbkey=misc_feature;gene=rodA;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3275366	3275434	.	+	.	ID=id5335;Note=9 probable transmembrane helices predicted for YE3003 by TMHMM2.0 at aa 15-37%2C 50-67%2C 77-99%2C 136-155%2C160-177%2C 184-206%2C 272-294%2C 306-328 and 338-360;gbkey=misc_feature;gene=rodA;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	3274403	3275449	.	+	.	ID=id5336;Note=Pfam match to entry PF01098 FTSW_RODA_SPOVE%2C Cell cycle protein%2C score 588.2%2C E-value 3.3e-174;gbkey=misc_feature;gene=rodA;inference=protein motif:PFAM:PF01098
AM286415.1	EMBL	sequence_feature	3275315	3275389	.	+	.	ID=id5337;Note=PS00428 Cell cycle proteins ftsW / rodA / spoVE signature.;gbkey=misc_feature;gene=rodA;inference=protein motif:Prosite:PS00428
AM286415.1	EMBL	gene	3275477	3276574	.	+	.	ID=gene2958;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=YE3004
AM286415.1	EMBL	CDS	3275477	3276574	.	+	0	ID=cds2873;Parent=gene2958;Dbxref=EnsemblGenomes-Gn:YE3004,EnsemblGenomes-Tr:CAL13043,InterPro:IPR007730,InterPro:IPR009009,InterPro:IPR012997,UniProtKB/TrEMBL:A1JPR4,NCBI_GP:CAL13043.1;Name=CAL13043.1;gbkey=CDS;gene=rlpA;product=rare lipoprotein A precursor;protein_id=CAL13043.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3275498	3275530	.	+	.	ID=id5338;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=rlpA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3275699	3275980	.	+	.	ID=id5339;Note=Pfam match to entry PF03330 Lipoprotein_13%2C Rare lipoprotein A (RlpA) family%2C score 187.0%2C E-value 1.9e-53;gbkey=misc_feature;gene=rlpA;inference=protein motif:PFAM:PF03330
AM286415.1	EMBL	gene	3276788	3277999	.	+	.	ID=gene2959;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=YE3005
AM286415.1	EMBL	CDS	3276788	3277999	.	+	0	ID=cds2874;Parent=gene2959;Dbxref=EnsemblGenomes-Gn:YE3005,EnsemblGenomes-Tr:CAL13044,GOA:A1JPR6,InterPro:IPR001967,InterPro:IPR012338,InterPro:IPR012907,InterPro:IPR015956,InterPro:IPR018044,UniProtKB/TrEMBL:A1JPR6,NCBI_GP:CAL13044.1;Name=CAL13044.1;gbkey=CDS;gene=dacA;product=putative penicillin-binding protein 5;protein_id=CAL13044.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3276887	3277669	.	+	.	ID=id5340;Note=Pfam match to entry PF00768 Peptidase_S11%2CD-alanyl-D-alanine carboxypeptidase%2C score 499.1%2C E-value 2.1e-147;gbkey=misc_feature;gene=dacA;inference=protein motif:PFAM:PF00768
AM286415.1	EMBL	gene	3278148	3278411	.	+	.	ID=gene2960;Name=YE3006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3006
AM286415.1	EMBL	CDS	3278148	3278411	.	+	0	ID=cds2875;Parent=gene2960;Dbxref=EnsemblGenomes-Gn:YE3006,EnsemblGenomes-Tr:CAL13045,InterPro:IPR007454,InterPro:IPR027471,NCBI_GP:CAL13045.1;Name=CAL13045.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13045.1;transl_table=11
AM286415.1	EMBL	gene	3278566	3279279	.	+	.	ID=gene2961;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=YE3007
AM286415.1	EMBL	CDS	3278566	3279279	.	+	0	ID=cds2876;Parent=gene2961;Dbxref=EnsemblGenomes-Gn:YE3007,EnsemblGenomes-Tr:CAL13046,GOA:A1JPR8,InterPro:IPR000544,InterPro:IPR004143,InterPro:IPR020605,NCBI_GP:CAL13046.1;Name=CAL13046.1;gbkey=CDS;gene=lipB;product=lipoate-protein ligase B;protein_id=CAL13046.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3278710	3279063	.	+	.	ID=id5341;Note=Pfam match to entry PF03099 BPL_LipA_LipB%2CBiotin/lipoate A/B protein ligase family%2C score 119.7%2CE-value 3.5e-33;gbkey=misc_feature;gene=lipB;inference=protein motif:PFAM:PF03099
AM286415.1	EMBL	sequence_feature	3278788	3278835	.	+	.	ID=id5342;Note=PS01313 Lipoate-protein ligase B signature.;gbkey=misc_feature;gene=lipB;inference=protein motif:Prosite:PS01313
AM286415.1	EMBL	gene	3279468	3280433	.	+	.	ID=gene2962;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;gene_synonym=lip;locus_tag=YE3008
AM286415.1	EMBL	CDS	3279468	3280433	.	+	0	ID=cds2877;Parent=gene2962;Dbxref=EnsemblGenomes-Gn:YE3008,EnsemblGenomes-Tr:CAL13047,GOA:A1JPR9,InterPro:IPR003698,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR013785,NCBI_GP:CAL13047.1;Name=CAL13047.1;gbkey=CDS;gene=lipA;product=lipoic acid synthetase;protein_id=CAL13047.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3279642	3280409	.	+	.	ID=id5343;Note=Pfam match to entry PF02546 Lipoate_synth%2C Lipoate synthase%2C score 677.4%2C E-value 4.6e-201;gbkey=misc_feature;gene=lipA;inference=protein motif:PFAM:PF02546
AM286415.1	EMBL	gene	3280576	3280791	.	-	.	ID=gene2963;Name=tatE;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=YE3009
AM286415.1	EMBL	CDS	3280576	3280791	.	-	0	ID=cds2878;Parent=gene2963;Dbxref=EnsemblGenomes-Gn:YE3009,EnsemblGenomes-Tr:CAL13048,GOA:A1JPK4,InterPro:IPR003369,InterPro:IPR006312,InterPro:IPR024905,UniProtKB/TrEMBL:A1JPK4,NCBI_GP:CAL13048.1;Name=CAL13048.1;gbkey=CDS;gene=tatE;product=sec-independent protein translocase protein;protein_id=CAL13048.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3280633	3280782	.	-	.	ID=id5344;Note=Pfam match to entry PF02416 MttA_Hcf106%2CmttA/Hcf106 family%2C score 26.8%2C E-value 4.4e-06;gbkey=misc_feature;gene=tatE;inference=protein motif:PFAM:PF02416
AM286415.1	EMBL	sequence_feature	3280729	3280782	.	-	.	ID=id5345;Note=1 probable transmembrane helix predicted for YE3009 by TMHMM2.0 at aa 4-21;gbkey=misc_feature;gene=tatE;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3280995	3282047	.	+	.	ID=gene2964;Name=adrA;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;locus_tag=YE3010
AM286415.1	EMBL	CDS	3280995	3282047	.	+	0	ID=cds2879;Parent=gene2964;Dbxref=EnsemblGenomes-Gn:YE3010,EnsemblGenomes-Tr:CAL13049,InterPro:IPR000160,InterPro:IPR007894,InterPro:IPR029787,UniProtKB/TrEMBL:A1JPK6,NCBI_GP:CAL13049.1;Name=CAL13049.1;Note=Similar to the C-terminal regions of Salmonella typhimurium putative diguanylate cyclase/phosphodiesterase domain 1 protein AdrA SWALL:Q9L401 (EMBL:AJ271071) (370 aa) fasta scores: E(): 8.9e-62%2C 47.67 38d in 344 aa%2C and Escherichia coli hypothetical protein YaiC SWALL:YAIC_ECOLI (SWALL:P21830) (371 aa) fasta scores: E(): 6.7e-64%2C 46.28 38d in 350 aa. CDS appears to be truncated at the N-terminus in comparison to orthologues. Possible pseudogene;gbkey=CDS;gene=adrA;inference=similar to sequence:UniProtKB:P21830;product=putative diguanylate cyclase/phosphodiesterase domain 1 protein;protein_id=CAL13049.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3281124	3281192	.	+	.	ID=id5346;Note=4 probable transmembrane helices predicted for YE3010 by TMHMM2.0 at aa 13-35%2C 55-77%2C 90-109 and 119-141;gbkey=misc_feature;gene=adrA;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3281250	3281318	.	+	.	ID=id5346;Note=4 probable transmembrane helices predicted for YE3010 by TMHMM2.0 at aa 13-35%2C 55-77%2C 90-109 and 119-141;gbkey=misc_feature;gene=adrA;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3281355	3281414	.	+	.	ID=id5346;Note=4 probable transmembrane helices predicted for YE3010 by TMHMM2.0 at aa 13-35%2C 55-77%2C 90-109 and 119-141;gbkey=misc_feature;gene=adrA;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3281442	3281510	.	+	.	ID=id5346;Note=4 probable transmembrane helices predicted for YE3010 by TMHMM2.0 at aa 13-35%2C 55-77%2C 90-109 and 119-141;gbkey=misc_feature;gene=adrA;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3281547	3282029	.	+	.	ID=id5347;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 212.0%2C E-value 5.8e-61;gbkey=misc_feature;gene=adrA;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	gene	3282095	3282478	.	+	.	ID=gene2965;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=YE3011
AM286415.1	EMBL	CDS	3282095	3282478	.	+	0	ID=cds2880;Parent=gene2965;Dbxref=EnsemblGenomes-Gn:YE3011,EnsemblGenomes-Tr:CAL13050,GOA:A1JPK7,InterPro:IPR003691,UniProtKB/TrEMBL:A1JPK7,NCBI_GP:CAL13050.1;Name=CAL13050.1;gbkey=CDS;gene=crcB;product=putative membrane protein;protein_id=CAL13050.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3282107	3282163	.	+	.	ID=id5348;Note=4 probable transmembrane helices predicted for YE3011 by TMHMM2.0 at aa 5-23%2C 33-55%2C 67-89 and 104-126;gbkey=misc_feature;gene=crcB;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3282191	3282259	.	+	.	ID=id5348;Note=4 probable transmembrane helices predicted for YE3011 by TMHMM2.0 at aa 5-23%2C 33-55%2C 67-89 and 104-126;gbkey=misc_feature;gene=crcB;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3282293	3282361	.	+	.	ID=id5348;Note=4 probable transmembrane helices predicted for YE3011 by TMHMM2.0 at aa 5-23%2C 33-55%2C 67-89 and 104-126;gbkey=misc_feature;gene=crcB;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3282404	3282472	.	+	.	ID=id5348;Note=4 probable transmembrane helices predicted for YE3011 by TMHMM2.0 at aa 5-23%2C 33-55%2C 67-89 and 104-126;gbkey=misc_feature;gene=crcB;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3282107	3282457	.	+	.	ID=id5349;Note=Pfam match to entry PF02537 CRCB%2C CrcB-like protein%2C score 165.9%2C E-value 4.4e-47;gbkey=misc_feature;gene=crcB;inference=protein motif:PFAM:PF02537
AM286415.1	EMBL	gene	3282778	3282987	.	-	.	ID=gene2966;Name=cspE1;gbkey=Gene;gene=cspE1;gene_biotype=protein_coding;locus_tag=YE3012
AM286415.1	EMBL	CDS	3282778	3282987	.	-	0	ID=cds2881;Parent=gene2966;Dbxref=EnsemblGenomes-Gn:YE3012,EnsemblGenomes-Tr:CAL13051,GOA:A1JPK9,InterPro:IPR002059,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,InterPro:IPR019844,UniProtKB/TrEMBL:A1JPK9,NCBI_GP:CAL13051.1;Name=CAL13051.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 cold shock-like protein CspE cspE or msmC or gicA or b0623 or z0769 or ecs0662 SWALL:CSPE_ECOLI (SWALL:P36997) (68 aa) fasta scores: E(): 4.5e-24%2C 91.17 id in 68 aa%2C and to Yersinia pestis putative cold shock protein cspE or ypo2595 SWALL:Q8ZDH3 (EMBL:AJ414153) (69 aa) fasta scores: E(): 9.2e-26%2C 97.1 38d in 69 aa%2C and to Vibrio cholerae hypothetical 7.5 kDa protein SWALL:AAC72388 (EMBL:AF098260) (69 aa) fasta scores: E(): 1.4e-24%2C 91.3 38d in 69 aa;gbkey=CDS;gene=cspE1;inference=similar to sequence:UniProtKB:P36997;product=cold shock-like protein cspE1;protein_id=CAL13051.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3282781	3282981	.	-	.	ID=id5350;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 154.7%2C E-value 1e-43;gbkey=misc_feature;gene=cspE1;inference=protein motif:PFAM:PF00313
AM286415.1	EMBL	sequence_feature	3282880	3282939	.	-	.	ID=id5351;Note=PS00352 'Cold-shock' DNA-binding domain signature.;gbkey=misc_feature;gene=cspE1;inference=protein motif:Prosite:PS00352
AM286415.1	EMBL	gene	3283362	3283733	.	+	.	ID=gene2967;Name=YE3013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3013
AM286415.1	EMBL	CDS	3283362	3283733	.	+	0	ID=cds2882;Parent=gene2967;Dbxref=EnsemblGenomes-Gn:YE3013,EnsemblGenomes-Tr:CAL13052,UniProtKB/TrEMBL:A1JPL0,NCBI_GP:CAL13052.1;Name=CAL13052.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13052.1;transl_table=11
AM286415.1	EMBL	gene	3283919	3284530	.	-	.	ID=gene2968;Name=YE3014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3014
AM286415.1	EMBL	CDS	3283919	3284530	.	-	0	ID=cds2883;Parent=gene2968;Dbxref=EnsemblGenomes-Gn:YE3014,EnsemblGenomes-Tr:CAL13053,GOA:A1JPL1,InterPro:IPR000792,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JPL1,NCBI_GP:CAL13053.1;Name=CAL13053.1;gbkey=CDS;product=putative LuxR-family regulatory proteins;protein_id=CAL13053.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3283928	3284104	.	-	.	ID=id5352;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 21.5%2C E-value 1.9e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	gene	3284883	3285848	.	+	.	ID=gene2969;Name=YE3015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3015
AM286415.1	EMBL	CDS	3284883	3285848	.	+	0	ID=cds2884;Parent=gene2969;Dbxref=EnsemblGenomes-Gn:YE3015,EnsemblGenomes-Tr:CAL13054,UniProtKB/TrEMBL:A1JPL3,NCBI_GP:CAL13054.1;Name=CAL13054.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13054.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3284997	3285065	.	+	.	ID=id5353;Note=9 probable transmembrane helices predicted for YE3015 by TMHMM2.0 at aa 39-61%2C 74-91%2C 101-123%2C 130-147%2C162-179%2C 192-210%2C 225-244%2C 257-279 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3285102	3285155	.	+	.	ID=id5353;Note=9 probable transmembrane helices predicted for YE3015 by TMHMM2.0 at aa 39-61%2C 74-91%2C 101-123%2C 130-147%2C162-179%2C 192-210%2C 225-244%2C 257-279 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3285183	3285251	.	+	.	ID=id5353;Note=9 probable transmembrane helices predicted for YE3015 by TMHMM2.0 at aa 39-61%2C 74-91%2C 101-123%2C 130-147%2C162-179%2C 192-210%2C 225-244%2C 257-279 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3285270	3285323	.	+	.	ID=id5353;Note=9 probable transmembrane helices predicted for YE3015 by TMHMM2.0 at aa 39-61%2C 74-91%2C 101-123%2C 130-147%2C162-179%2C 192-210%2C 225-244%2C 257-279 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3285366	3285419	.	+	.	ID=id5353;Note=9 probable transmembrane helices predicted for YE3015 by TMHMM2.0 at aa 39-61%2C 74-91%2C 101-123%2C 130-147%2C162-179%2C 192-210%2C 225-244%2C 257-279 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3285456	3285512	.	+	.	ID=id5353;Note=9 probable transmembrane helices predicted for YE3015 by TMHMM2.0 at aa 39-61%2C 74-91%2C 101-123%2C 130-147%2C162-179%2C 192-210%2C 225-244%2C 257-279 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3285555	3285614	.	+	.	ID=id5353;Note=9 probable transmembrane helices predicted for YE3015 by TMHMM2.0 at aa 39-61%2C 74-91%2C 101-123%2C 130-147%2C162-179%2C 192-210%2C 225-244%2C 257-279 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3285651	3285719	.	+	.	ID=id5353;Note=9 probable transmembrane helices predicted for YE3015 by TMHMM2.0 at aa 39-61%2C 74-91%2C 101-123%2C 130-147%2C162-179%2C 192-210%2C 225-244%2C 257-279 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3285747	3285815	.	+	.	ID=id5353;Note=9 probable transmembrane helices predicted for YE3015 by TMHMM2.0 at aa 39-61%2C 74-91%2C 101-123%2C 130-147%2C162-179%2C 192-210%2C 225-244%2C 257-279 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	3285261	3285308	.	+	.	ID=id5354;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00038
AM286415.1	EMBL	gene	3285999	3286643	.	-	.	ID=gene2970;Name=YE3016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3016
AM286415.1	EMBL	CDS	3285999	3286643	.	-	0	ID=cds2885;Parent=gene2970;Dbxref=EnsemblGenomes-Gn:YE3016,EnsemblGenomes-Tr:CAL13055,GOA:A1JPD3,InterPro:IPR004843,InterPro:IPR006186,InterPro:IPR029052,UniProtKB/TrEMBL:A1JPD3,NCBI_GP:CAL13055.1;Name=CAL13055.1;Note=Similar to Bacteriophage lambda serine/threonine protein phosphatase SWALL:PP_LAMBD (SWALL:P03772) (221 aa) fasta scores: E(): 3.3e-48%2C 56.74 38d in 215 aa%2C and to Escherichia coli serine/threonine protein phosphatase 1 PphA or PrpA SWALL:PRP1_ECOLI (SWALL:P55798) (218 aa) fasta scores: E(): 6.3e-42%2C 50.93 38d in 214 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P55798;product=serine/threonine protein phosphatase;protein_id=CAL13055.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3286083	3286613	.	-	.	ID=id5355;Note=Pfam match to entry PF00149 Metallophos%2CCalcineurin-like phosphoesterase%2C score 69.7%2C E-value 3.9e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00149
AM286415.1	EMBL	sequence_feature	3286419	3286436	.	-	.	ID=id5356;Note=PS00125 Serine/threonine specific protein phosphatases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00125
AM286415.1	EMBL	gene	3286894	3287088	.	-	.	ID=gene2971;Name=YE3017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3017
AM286415.1	EMBL	CDS	3286894	3287088	.	-	0	ID=cds2886;Parent=gene2971;Dbxref=EnsemblGenomes-Gn:YE3017,EnsemblGenomes-Tr:CAL13056,GOA:A1JPD4,InterPro:IPR009052,InterPro:IPR011326,InterPro:IPR015065,UniProtKB/TrEMBL:A1JPD4,NCBI_GP:CAL13056.1;Name=CAL13056.1;Note=Similar to Salmonella typhi hypothetical protein STY4108 SWALL:Q8Z2E1 (EMBL:AL627280) (68 aa) fasta scores: E(): 0.31%2C 34 38d in 50 aa%2C and to Yersinia pestis hypothetical protein YPO2590 SWALL:Q8ZDH8 (EMBL:AJ414153) (64 aa) fasta scores: E(): 2.5e-16%2C 82.54 38d in 63 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627280;product=conserved hypothetical protein;protein_id=CAL13056.1;transl_table=11
AM286415.1	EMBL	gene	3287435	3287722	.	+	.	ID=gene2972;Name=YE3018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3018
AM286415.1	EMBL	CDS	3287435	3287722	.	+	0	ID=cds2887;Parent=gene2972;Dbxref=EnsemblGenomes-Gn:YE3018,EnsemblGenomes-Tr:CAL13057,InterPro:IPR007138,InterPro:IPR011008,UniProtKB/TrEMBL:A1JPD5,NCBI_GP:CAL13057.1;Name=CAL13057.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13057.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3287435	3287719	.	+	.	ID=id5357;Note=Pfam match to entry PF02619 DUF176%2C Uncharacterized ACR%2C YneC family COG1359%2C score 47.9%2C E-value 1.5e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF02619
AM286415.1	EMBL	gene	3287740	3289512	.	-	.	ID=gene2973;Name=YE3019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3019
AM286415.1	EMBL	CDS	3287740	3289512	.	-	0	ID=cds2888;Parent=gene2973;Dbxref=EnsemblGenomes-Gn:YE3019,EnsemblGenomes-Tr:CAL13058,GOA:A1JPD7,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JPD7,NCBI_GP:CAL13058.1;Name=CAL13058.1;gbkey=CDS;product=putative ABC transport protein;protein_id=CAL13058.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3287845	3288399	.	-	.	ID=id5358;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 205.3%2C E-value 6.2e-59;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3288022	3288066	.	-	.	ID=id5359;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	3288355	3288378	.	-	.	ID=id5360;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3288613	3289437	.	-	.	ID=id5361;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 124.5%2C E-value 1.3e-34;gbkey=misc_feature;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	3289375	3289443	.	-	.	ID=id5362;Note=5 probable transmembrane helices predicted for YE3019 by TMHMM2.0 at aa 24-46%2C 61-80%2C 143-165%2C 169-191 and 250-272;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3289273	3289332	.	-	.	ID=id5362;Note=5 probable transmembrane helices predicted for YE3019 by TMHMM2.0 at aa 24-46%2C 61-80%2C 143-165%2C 169-191 and 250-272;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3289018	3289086	.	-	.	ID=id5362;Note=5 probable transmembrane helices predicted for YE3019 by TMHMM2.0 at aa 24-46%2C 61-80%2C 143-165%2C 169-191 and 250-272;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3288940	3289008	.	-	.	ID=id5362;Note=5 probable transmembrane helices predicted for YE3019 by TMHMM2.0 at aa 24-46%2C 61-80%2C 143-165%2C 169-191 and 250-272;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3288697	3288765	.	-	.	ID=id5362;Note=5 probable transmembrane helices predicted for YE3019 by TMHMM2.0 at aa 24-46%2C 61-80%2C 143-165%2C 169-191 and 250-272;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	3288976	3289008	.	-	.	ID=id5363;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3290029	3291504	.	-	.	ID=gene2974;Name=YE3020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3020
AM286415.1	EMBL	CDS	3290029	3291504	.	-	0	ID=cds2889;Parent=gene2974;Dbxref=EnsemblGenomes-Gn:YE3020,EnsemblGenomes-Tr:CAL13059,GOA:A1JPD8,InterPro:IPR002830,InterPro:IPR012349,UniProtKB/TrEMBL:A1JPD8,NCBI_GP:CAL13059.1;Name=CAL13059.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein PA0254 SWALL:Q9I6N5 (EMBL:AE004463) (496 aa) fasta scores: E(): 7.4e-63%2C 35.23 38d in 491 aa. Weakly similar to Escherichia coli 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD SWALL:UBID_ECOLI (SWALL:P26615) (497 aa) fasta scores: E(): 1.5e-16%2C 26.17 38d in 470 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P26615;product=putative lyase;protein_id=CAL13059.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3290188	3291477	.	-	.	ID=id5364;Note=Pfam match to entry PF01977 UPF0096%2C VdcC family %2Cscore 147.0%2C E-value 2.2e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF01977
AM286415.1	EMBL	gene	3291534	3293129	.	-	.	ID=gene2975;Name=YE3021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3021
AM286415.1	EMBL	CDS	3291534	3293129	.	-	0	ID=cds2890;Parent=gene2975;Dbxref=EnsemblGenomes-Gn:YE3021,EnsemblGenomes-Tr:CAL13060,GOA:A1JPE0,InterPro:IPR001106,InterPro:IPR008948,InterPro:IPR024083,UniProtKB/TrEMBL:A1JPE0,NCBI_GP:CAL13060.1;Name=CAL13060.1;Note=Similar to an internal region of Oryza sativa phenylalanine ammonia-lyase ZB8 SWALL:PAL2_ORYSA (SWALL:P53443) (710 aa) fasta scores: E(): 3.4e-28%2C 31.02 id in 506 aa%2C and to full length Streptomyces maritimus putative phenylalanine ammonia lyase EncP SWALL:Q9KHJ9 (EMBL:AF254925) (523 aa) fasta scores: E(): 1.6e-46%2C29.78 38d in 517 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P53443;product=putative phenylalanine and histidine ammonia-lyase;protein_id=CAL13060.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3291621	3293105	.	-	.	ID=id5365;Note=Pfam match to entry PF00221 PAL%2C Phenylalanine and histidine ammonia-lyase%2C score 384.5%2C E-value 7e-113;gbkey=misc_feature;inference=protein motif:PFAM:PF00221
AM286415.1	EMBL	gene	3293587	3294708	.	-	.	ID=gene2976;Name=YE3022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3022
AM286415.1	EMBL	CDS	3293587	3294708	.	-	0	ID=cds2891;Parent=gene2976;Dbxref=EnsemblGenomes-Gn:YE3022,EnsemblGenomes-Tr:CAL13061,InterPro:IPR003347,UniProtKB/TrEMBL:A1JP97,NCBI_GP:CAL13061.1;Name=CAL13061.1;Note=Similar to Escherichia coli hypothetical protein YcfD SWALL:YCFD_ECOLI (SWALL:P27431) (373 aa) fasta scores: E(): 3.4e-107%2C 66.12 38d in 372 aa%2C and to Salmonella typhimurium putative cytoplasmic protein STM1229 SWALL:Q8ZPZ7 (EMBL:AE008753) (373 aa) fasta scores: E(): 3.5e-106%2C 63.97 38d in 372 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P27431;product=conserved hypothetical protein;protein_id=CAL13061.1;transl_table=11
AM286415.1	EMBL	gene	3295097	3296053	.	-	.	ID=gene2977;Name=YE3023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3023
AM286415.1	EMBL	CDS	3295097	3296053	.	-	0	ID=cds2892;Parent=gene2977;Dbxref=EnsemblGenomes-Gn:YE3023,EnsemblGenomes-Tr:CAL13062,InterPro:IPR029058,InterPro:IPR029059,UniProtKB/TrEMBL:A1JP98,NCBI_GP:CAL13062.1;Name=CAL13062.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13062.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3295388	3295411	.	-	.	ID=id5366;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3296382	3297071	.	+	.	ID=gene2978;Name=copR;gbkey=Gene;gene=copR;gene_biotype=protein_coding;locus_tag=YE3024
AM286415.1	EMBL	CDS	3296382	3297071	.	+	0	ID=cds2893;Parent=gene2978;Dbxref=EnsemblGenomes-Gn:YE3024,EnsemblGenomes-Tr:CAL13063,GOA:A1JP99,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR006291,InterPro:IPR011006,InterPro:IPR011991,UniProtKB/TrEMBL:A1JP99,NCBI_GP:CAL13063.1;Name=CAL13063.1;gbkey=CDS;gene=copR;product=transcriptional activator;protein_id=CAL13063.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3296382	3296738	.	+	.	ID=id5367;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 131.6%2C E-value 9.4e-37;gbkey=misc_feature;gene=copR;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	3296820	3297035	.	+	.	ID=id5368;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 99.4%2C E-value 4.8e-27;gbkey=misc_feature;gene=copR;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	gene	3297087	3298562	.	+	.	ID=gene2979;Name=YE3025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3025
AM286415.1	EMBL	CDS	3297087	3298562	.	+	0	ID=cds2894;Parent=gene2979;Dbxref=EnsemblGenomes-Gn:YE3025,EnsemblGenomes-Tr:CAL13064,GOA:A1JPA0,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR005467,InterPro:IPR006290,InterPro:IPR009082,UniProtKB/TrEMBL:A1JPA0,NCBI_GP:CAL13064.1;Name=CAL13064.1;gbkey=CDS;product=putative two-component system sensor protein;protein_id=CAL13064.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3297114	3297182	.	+	.	ID=id5369;Note=2 probable transmembrane helices predicted for YE3025 by TMHMM2.0 at aa 10-32 and 163-182;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3297573	3297632	.	+	.	ID=id5369;Note=2 probable transmembrane helices predicted for YE3025 by TMHMM2.0 at aa 10-32 and 163-182;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	3297576	3297788	.	+	.	ID=id5370;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 54.1%2C E-value 2e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	3297798	3297998	.	+	.	ID=id5371;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 74.2%2C E-value 1.7e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	3298125	3298457	.	+	.	ID=id5372;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 100.2%2C E-value 2.6e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	3298631	3298987	.	+	.	ID=gene2980;Name=YE3026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3026
AM286415.1	EMBL	CDS	3298631	3298987	.	+	0	ID=cds2895;Parent=gene2980;Dbxref=EnsemblGenomes-Gn:YE3026,EnsemblGenomes-Tr:CAL13065,InterPro:IPR011051,InterPro:IPR014710,UniProtKB/TrEMBL:A1JPA2,NCBI_GP:CAL13065.1;Name=CAL13065.1;Note=No significant database matches to the full length CDS. N-terminus is similar to the N-terminal region of Yersinia pestis putative exported protein YPO1998 SWALL:Q8ZEZ8 (EMBL:AJ414151) (156 aa) fasta scores: E(): 4.8e-10%2C 41.59 38d in 113 aa. C-terminus is similar to an internal region of Brucella melitensis transcriptional regulator BMEII0800 SWALL:Q8YBT6 (EMBL:AE009714) (159 aa) fasta scores: E(): 5.3e-13%2C 55.55 38d in 81 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=putative exported protein;protein_id=CAL13065.1;transl_table=11
AM286415.1	EMBL	gene	3299086	3299850	.	+	.	ID=gene2981;Name=YE3027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3027
AM286415.1	EMBL	CDS	3299086	3299850	.	+	0	ID=cds2896;Parent=gene2981;Dbxref=EnsemblGenomes-Gn:YE3027,EnsemblGenomes-Tr:CAL13066,GOA:A1JPA3,InterPro:IPR003779,InterPro:IPR029032,UniProtKB/TrEMBL:A1JPA3,NCBI_GP:CAL13066.1;Name=CAL13066.1;Note=Similar to Xylella fastidiosa hypothetical protein XF1766 SWALL:Q9PCL2 (EMBL:AE003999) (260 aa) fasta scores: E(): 2e-47%2C 58.43 38d in 255 aa%2C and weakly similar to Rhizobium meliloti putative 4-carboxymuconolactone decarboxylase RA0292 or SMA0559 SWALL:Q930A6 (EMBL:AE007221) (259 aa) fasta scores: E(): 0.12%2C 25.37 id in 201 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE007221;product=exported protein;protein_id=CAL13066.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3299536	3299829	.	+	.	ID=id5373;Note=Pfam match to entry PF02627 CMD%2CCarboxymuconolactone decarboxylase%2C score 30.7%2C E-value 2.2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF02627
AM286415.1	EMBL	pseudogene	3299947	3301009	.	+	.	ID=gene2982;Name=YE3028;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE3028;pseudo=true
AM286415.1	EMBL	CDS	3299947	3300261	.	+	0	ID=cds2897;Parent=gene2982;Dbxref=PSEUDO:CAL13067.1;Note=Poor database matches. Similar to Yersinia pestis putative exported protein YPO1997 SWALL:Q8ZEZ9 (EMBL:AJ414151) (357 aa) fasta scores: E(): 9.4e-120%2C81.51 38d in 357 aa. Contains a frameshifts after codons 105 and 309;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=putative exported protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3300261	3300872	.	+	0	ID=cds2897;Parent=gene2982;Dbxref=PSEUDO:CAL13067.1;Note=Poor database matches. Similar to Yersinia pestis putative exported protein YPO1997 SWALL:Q8ZEZ9 (EMBL:AJ414151) (357 aa) fasta scores: E(): 9.4e-120%2C81.51 38d in 357 aa. Contains a frameshifts after codons 105 and 309;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=putative exported protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3300872	3301009	.	+	0	ID=cds2897;Parent=gene2982;Dbxref=PSEUDO:CAL13067.1;Note=Poor database matches. Similar to Yersinia pestis putative exported protein YPO1997 SWALL:Q8ZEZ9 (EMBL:AJ414151) (357 aa) fasta scores: E(): 9.4e-120%2C81.51 38d in 357 aa. Contains a frameshifts after codons 105 and 309;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=putative exported protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	signal_peptide	3299947	3300018	.	+	.	ID=id5374;Note=Signal peptide predicted for YE3027 by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.998 between residues 24 and 25;gbkey=sig_peptide;pseudo=true
AM286415.1	EMBL	gene	3301140	3301991	.	+	.	ID=gene2983;Name=YE3031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3031
AM286415.1	EMBL	CDS	3301140	3301991	.	+	0	ID=cds2898;Parent=gene2983;Dbxref=EnsemblGenomes-Gn:YE3031,EnsemblGenomes-Tr:CAL13068,GOA:A1JP35,InterPro:IPR001395,InterPro:IPR018170,InterPro:IPR020471,InterPro:IPR023210,UniProtKB/TrEMBL:A1JP35,NCBI_GP:CAL13068.1;Name=CAL13068.1;gbkey=CDS;product=putative aldo/keto reductase;protein_id=CAL13068.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3301155	3301922	.	+	.	ID=id5375;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 368.1%2C E-value 5.9e-108;gbkey=misc_feature;inference=protein motif:PFAM:PF00248
AM286415.1	EMBL	sequence_feature	3301254	3301307	.	+	.	ID=id5376;Note=PS00798 Aldo/keto reductase family signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00798
AM286415.1	EMBL	sequence_feature	3301497	3301550	.	+	.	ID=id5377;Note=PS00062 Aldo/keto reductase family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00062
AM286415.1	EMBL	sequence_feature	3301815	3301862	.	+	.	ID=id5378;Note=PS00063 Aldo/keto reductase family putative active site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00063
AM286415.1	EMBL	gene	3302151	3302477	.	-	.	ID=gene2984;Name=YE3032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3032
AM286415.1	EMBL	CDS	3302151	3302477	.	-	0	ID=cds2899;Parent=gene2984;Dbxref=EnsemblGenomes-Gn:YE3032,EnsemblGenomes-Tr:CAL13069,InterPro:IPR009799,InterPro:IPR011008,UniProtKB/TrEMBL:A1JP37,NCBI_GP:CAL13069.1;Name=CAL13069.1;Note=Similar to Yersinia pestis hypothetical protein DffD SWALL:Q93AB2 (EMBL:AF426171) (109 aa) fasta scores: E(): 8.8e-35%2C 78.7 38d in 108 aa%2C and to Bacillus halodurans hypothetical protein BH0200 SWALL:Q9KGB0 (EMBL:AP001507) (107 aa) fasta scores: E(): 0.53%2C 27.55 id in 98 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP001507;product=hypothetical protein;protein_id=CAL13069.1;transl_table=11
AM286415.1	EMBL	gene	3302712	3303623	.	+	.	ID=gene2985;Name=YE3033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3033
AM286415.1	EMBL	CDS	3302712	3303623	.	+	0	ID=cds2900;Parent=gene2985;Dbxref=EnsemblGenomes-Gn:YE3033,EnsemblGenomes-Tr:CAL13070,GOA:A1JP38,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JP38,NCBI_GP:CAL13070.1;Name=CAL13070.1;Note=Similar to Yersinia pestis putative transcriptional regulator SWALL:Q93AB4 (EMBL:AF426171) (303 aa) fasta scores: E(): 1.6e-101%2C 86.13 38d in 303 aa%2C and to Rhizobium loti probable transcriptional regulator MLR2579 SWALL:Q98I42 (EMBL:AP003000) (304 aa) fasta scores: E(): 6.3e-45%2C 45.76 38d in 295 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003000;product=LysR family transcription regulatory protein;protein_id=CAL13070.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3302730	3302909	.	+	.	ID=id5379;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 86.8%2C E-value 2.9e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	3302772	3302864	.	+	.	ID=id5380;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	3302979	3303605	.	+	.	ID=id5381;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 168.9%2C E-value 5.5e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	3303626	3304741	.	-	.	ID=gene2986;Name=YE3034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3034
AM286415.1	EMBL	CDS	3303626	3304741	.	-	0	ID=cds2901;Parent=gene2986;Dbxref=EnsemblGenomes-Gn:YE3034,EnsemblGenomes-Tr:CAL13071,GOA:A1JP39,InterPro:IPR001155,InterPro:IPR013785,UniProtKB/TrEMBL:A1JP39,NCBI_GP:CAL13071.1;Name=CAL13071.1;Note=Similar to Pseudomonas putida morphinone reductase MorB SWALL:Q51990 (EMBL:U37350) (377 aa) fasta scores: E(): 1e-64%2C 48.64 38d in 368 aa%2C and to Yersinia pestis morphinone reductase MorB SWALL:Q93AB5 (EMBL:AF426171) (369 aa) fasta scores: E(): 9.5e-113%2C 77.26 38d in 365 aa;gbkey=CDS;inference=similar to sequence:INSDC:U37350;product=NADH:flavin oxidoreductase / NADH oxidase family protein;protein_id=CAL13071.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3303713	3304735	.	-	.	ID=id5382;Note=Pfam match to entry PF00724 oxidored_FMN%2CNADH:flavin oxidoreductase / NADH oxidase family%2C score 307.7%2C E-value 9e-90;gbkey=misc_feature;inference=protein motif:PFAM:PF00724
AM286415.1	EMBL	gene	3305377	3305715	.	+	.	ID=gene2987;Name=YE3035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3035
AM286415.1	EMBL	CDS	3305377	3305715	.	+	0	ID=cds2902;Parent=gene2987;Dbxref=EnsemblGenomes-Gn:YE3035,EnsemblGenomes-Tr:CAL13072,UniProtKB/TrEMBL:A1JP41,NCBI_GP:CAL13072.1;Name=CAL13072.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13072.1;transl_table=11
AM286415.1	EMBL	gene	3305700	3306347	.	+	.	ID=gene2988;Name=YE3036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3036
AM286415.1	EMBL	CDS	3305700	3306347	.	+	0	ID=cds2903;Parent=gene2988;Dbxref=EnsemblGenomes-Gn:YE3036,EnsemblGenomes-Tr:CAL13073,UniProtKB/TrEMBL:A1JP42,NCBI_GP:CAL13073.1;Name=CAL13073.1;Note=No significant database matches to the full length CDS. C-terminal region is highly similar to Yersinia pestis hypothetical protein YPO2821 SWALL:Q8ZCY4 (EMBL:AJ414153) (115 aa) fasta scores: E(): 7.3e-41%2C97.39 38d in 115 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414153;product=hypothetical protein;protein_id=CAL13073.1;transl_table=11
AM286415.1	EMBL	pseudogene	3306442	3306741	.	+	.	ID=gene2989;Name=YE3037;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE3037;pseudo=true
AM286415.1	EMBL	CDS	3306442	3306741	.	+	0	ID=cds2904;Parent=gene2989;Note=Poor database matches. Highly similar to the N-terminus of Yersinia pestis hypothetical protein YPO0875 SWALL:Q8ZHL6 (EMBL:AJ414145) (121 aa) fasta scores: E(): 1.4e-18%2C 79.16 38d in 72 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=hypothetical protein (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	pseudogene	3306742	3306858	.	-	.	ID=gene2990;Name=int;gbkey=Gene;gene=int;gene_biotype=pseudogene;locus_tag=YE3038;pseudo=true
AM286415.1	EMBL	CDS	3306742	3306858	.	-	0	ID=cds2905;Parent=gene2990;Note=Similar to the N-terminal regions of Escherichia coli integrase Int SWALL:Q93SE7 (EMBL:AJ278144) (394 aa) fasta scores: E(): 1.6e-10%2C 70 38d in 40 aa%2C and Shigella flexneri integrase Int SWALL:Q9XCI7 (EMBL:AF141323) (394 aa) fasta scores: E(): 1.6e-10%2C 70 38d in 40 aa;gbkey=CDS;gene=int;inference=similar to sequence:INSDC:AJ278144;product=integrase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	3307405	3308364	.	+	.	ID=gene2991;Name=YE3039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3039
AM286415.1	EMBL	CDS	3307405	3308364	.	+	0	ID=cds2906;Parent=gene2991;Dbxref=EnsemblGenomes-Gn:YE3039,EnsemblGenomes-Tr:CAL13076,InterPro:IPR018707,UniProtKB/TrEMBL:A1JP43,NCBI_GP:CAL13076.1;Name=CAL13076.1;Note=Similar to Salmonella typhimurium putative outer membrane protein STM1328 SWALL:Q8ZPT3 (EMBL:AE008757) (319 aa) fasta scores: E(): 5.5e-93%2C 71.87 38d in 320 aa%2C and to Salmonella typhi putative outer membrane protein STY1783 SWALL:Q8Z6H9 (EMBL:AL627271) (319 aa) fasta scores: E(): 5.5e-93%2C 71.87 38d in 320 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627271;product=putative exported protein;protein_id=CAL13076.1;transl_table=11
AM286415.1	EMBL	repeat_region	3308707	3309491	.	+	.	ID=id5383;Note=appears to be a defunct insertion sequence of the IS3 family;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	3308707	3308745	.	+	.	ID=id5384;Note=possible inverted repeat for IS3-like insertion element;gbkey=repeat_region
AM286415.1	EMBL	gene	3308773	3309072	.	+	.	ID=gene2992;Name=YE3040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3040
AM286415.1	EMBL	CDS	3308773	3309072	.	+	0	ID=cds2907;Parent=gene2992;Dbxref=EnsemblGenomes-Gn:YE3040,EnsemblGenomes-Tr:CAL13077,GOA:A1JNW6,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JNW6,NCBI_GP:CAL13077.1;Name=CAL13077.1;Note=Similar to several transposases including: Escherichia coli transposase InsE for insertion sequence IS3a/b/c/d/e/fa/fb SWALL:INSE_ECOLI (SWALL:P77681) (102 aa) fasta scores: E(): 6.2e-26%2C 82.82 38d in 99 aa and to Salmonella enteritidis insertion sequence IS1230 SWALL:O34117 (EMBL:U91789) (177 aa) fasta scores: E(): 2.9e-11%2C 80.7 38d in 57 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77681;product=transposase for insertion element IS3;protein_id=CAL13077.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3308809	3309057	.	+	.	ID=id5385;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 60.6%2C E-value 2.1e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF01527
AM286415.1	EMBL	gene	3309069	3309461	.	+	.	ID=gene2993;Name=YE3041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3041
AM286415.1	EMBL	CDS	3309069	3309461	.	+	0	ID=cds2908;Parent=gene2993;Dbxref=EnsemblGenomes-Gn:YE3041,EnsemblGenomes-Tr:CAL13078,NCBI_GP:CAL13078.1;Name=CAL13078.1;Note=Similar in parts to many including: Escherichia coli TnP protein SWALL:Q93K84 (EMBL:X16664) (284 aa) fasta scores: E(): 4.9e-25%2C 40.49 38d in 284 aa and to Escherichia coli transposase insF for insertion sequence IS3fb SWALL:INF7_ECOLI (SWALL:Q9JMT3) (288 aa) fasta scores: E(): 1.1e-23%2C 63.2 38d in 125 aa. This CDS may have been subject to a large deletion event removing the central portion of the predicted product.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9JMT3;product=transposase for insertion element IS3 (pseudogene);protein_id=CAL13078.1;transl_table=11
AM286415.1	EMBL	repeat_region	3309453	3309491	.	+	.	ID=id5386;Note=possible inverted repeat for IS3-like insertion element;gbkey=repeat_region
AM286415.1	EMBL	gene	3309489	3310058	.	-	.	ID=gene2994;Name=YE3042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3042
AM286415.1	EMBL	CDS	3309489	3310058	.	-	0	ID=cds2909;Parent=gene2994;Dbxref=EnsemblGenomes-Gn:YE3042,EnsemblGenomes-Tr:CAL13079,InterPro:IPR025484,UniProtKB/TrEMBL:A1JNW8,NCBI_GP:CAL13079.1;Name=CAL13079.1;Note=Similar to bacteriophage P27 hypothetical protein SWALL:Q8W610 (EMBL:AJ298298) (188 aa) fasta scores: E(): 1.5e-37%2C 56.21 38d in 185 aa%2C and to Escherichia coli hypothetical protein Orf-191A SWALL:Q9LA61 (EMBL:AF151091) (191 aa) fasta scores: E(): 1.1e-18%2C 36.87 38d in 179 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ298298;product=conserved hypothetical protein;protein_id=CAL13079.1;transl_table=11
AM286415.1	EMBL	repeat_region	3310575	3311784	.	+	.	ID=id5387;Note=Insertion sequence elment IS1329;gbkey=repeat_region
AM286415.1	EMBL	gene	3310600	3310932	.	+	.	ID=gene2995;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=YE3043
AM286415.1	EMBL	CDS	3310600	3310932	.	+	0	ID=cds2910;Parent=gene2995;Dbxref=EnsemblGenomes-Gn:YE3043,EnsemblGenomes-Tr:CAL13080,GOA:A1JK04,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JK04,NCBI_GP:CAL13080.1;Name=CAL13080.1;Note=Previously sequenced as Yersinia enterocolitica IS1329 transposase A Trp1329A SWALL:Q9X9I2 (EMBL:AJ132945) (110 aa) fasta scores: E(): 1.8e-38%2C 100 38d in 110 aa. Also similar to Shigella dysenteriae transposase InsN for insertion sequence element IS911 SWALL:INSN_SHIDY (SWALL:P39213) (112 aa) fasta scores: E(): 7.6e-13%2C 42.45 id in 106 aa;gbkey=CDS;gene=tnpA;inference=similar to sequence:UniProtKB:P39213;product=IS1329 transposase A;protein_id=CAL13080.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3310633	3310899	.	+	.	ID=id5388;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 56.0%2C E-value 5.5e-14;gbkey=misc_feature;gene=tnpA;inference=protein motif:PFAM:PF01527
AM286415.1	EMBL	gene	3311022	3311771	.	+	.	ID=gene2996;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=YE3044
AM286415.1	EMBL	CDS	3311022	3311771	.	+	0	ID=cds2911;Parent=gene2996;Dbxref=EnsemblGenomes-Gn:YE3044,EnsemblGenomes-Tr:CAL13081,GOA:A1JLR3,InterPro:IPR001584,InterPro:IPR012337,InterPro:IPR025948,UniProtKB/TrEMBL:A1JLR3,NCBI_GP:CAL13081.1;Name=CAL13081.1;Note=Previously sequenced as Yersinia enterocolitica transposase B TnpB SWALL:Q9RIG3 (EMBL:AJ251581) (249 aa) fasta scores: E(): 1.4e-104%2C 100 38d in 249 aa. Also similar to Xanthomonas axonopodis pv. citri str. 306 ISxac3 transposase Xac1661 SWALL:AAM36528 (EMBL:AE011798) (272 aa) fasta scores: E(): 3.4e-37%2C 44.13 38d in 247 aa;gbkey=CDS;gene=tnpB;inference=similar to sequence:INSDC:AJ251581;product=transposase B;protein_id=CAL13081.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3311268	3311750	.	+	.	ID=id5389;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 133.0%2C E-value 3.5e-37;gbkey=misc_feature;gene=tnpB;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	3311810	3311886	.	-	.	ID=gene2997;Name=tRNA-Arg (TCT);gbkey=Gene;gene=tRNA-Arg (TCT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3311810	3311886	.	-	.	ID=rna112;Parent=gene2997;gbkey=tRNA;gene=tRNA-Arg (TCT);product=tRNA-Arg
AM286415.1	EMBL	exon	3311810	3311886	.	-	.	ID=id5390;Parent=rna112;gbkey=tRNA;gene=tRNA-Arg (TCT);product=tRNA-Arg
AM286415.1	EMBL	gene	3312100	3312981	.	+	.	ID=gene2998;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;gene_synonym=ads;locus_tag=YE3045
AM286415.1	EMBL	CDS	3312100	3312981	.	+	0	ID=cds2912;Parent=gene2998;Dbxref=EnsemblGenomes-Gn:YE3045,EnsemblGenomes-Tr:CAL13082,GOA:A1JNX2,InterPro:IPR000672,InterPro:IPR016040,InterPro:IPR020630,InterPro:IPR020631,InterPro:IPR020867,NCBI_GP:CAL13082.1;Name=CAL13082.1;gbkey=CDS;gene=folD;product=putative FolD bifunctional protein;protein_id=CAL13082.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3312100	3312462	.	+	.	ID=id5391;Note=Pfam match to entry PF00763 THF_DHG_CYH%2CTetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain%2C score 234.4%2C E-value 1e-67;gbkey=misc_feature;gene=folD;inference=protein motif:PFAM:PF00763
AM286415.1	EMBL	sequence_feature	3312106	3312129	.	+	.	ID=id5392;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=folD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3312325	3312402	.	+	.	ID=id5393;Note=PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1.;gbkey=misc_feature;gene=folD;inference=protein motif:Prosite:PS00766
AM286415.1	EMBL	sequence_feature	3312466	3312948	.	+	.	ID=id5394;Note=Pfam match to entry PF02882 THF_DHG_CYH_C%2CTetrahydrofolate dehydrogenase/cyclohydrolase%2CNAD(P)-binding domain%2C score 362.4%2C E-value 3.2e-106;gbkey=misc_feature;gene=folD;inference=protein motif:PFAM:PF02882
AM286415.1	EMBL	sequence_feature	3312877	3312903	.	+	.	ID=id5395;Note=PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2.;gbkey=misc_feature;gene=folD;inference=protein motif:Prosite:PS00767
AM286415.1	EMBL	sequence_feature	3312904	3312936	.	+	.	ID=id5396;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=folD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3312981	3313193	.	+	.	ID=gene2999;Name=YE3046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3046
AM286415.1	EMBL	CDS	3312981	3313193	.	+	0	ID=cds2913;Parent=gene2999;Dbxref=EnsemblGenomes-Gn:YE3046,EnsemblGenomes-Tr:CAL13083,GOA:A1JNP8,InterPro:IPR002942,UniProtKB/TrEMBL:A1JNP8,NCBI_GP:CAL13083.1;Name=CAL13083.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13083.1;transl_table=11
AM286415.1	EMBL	gene	3313398	3314783	.	-	.	ID=gene3000;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=YE3048
AM286415.1	EMBL	CDS	3313398	3314783	.	-	0	ID=cds2914;Parent=gene3000;Dbxref=EnsemblGenomes-Gn:YE3048,EnsemblGenomes-Tr:CAL13084,GOA:A1JNP9,InterPro:IPR009080,InterPro:IPR014729,InterPro:IPR015273,InterPro:IPR015803,InterPro:IPR024909,NCBI_GP:CAL13084.1;Name=CAL13084.1;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=CAL13084.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3313443	3314744	.	-	.	ID=id5397;Note=Pfam match to entry PF01406 tRNA-synt_1e%2C tRNA synthetases class I (C)%2C score 916.7%2C E-value 4.4e-273;gbkey=misc_feature;gene=cysS;inference=protein motif:PFAM:PF01406
AM286415.1	EMBL	gene	3314996	3315490	.	+	.	ID=gene3001;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=YE3049
AM286415.1	EMBL	CDS	3314996	3315490	.	+	0	ID=cds2915;Parent=gene3001;Dbxref=EnsemblGenomes-Gn:YE3049,EnsemblGenomes-Tr:CAL13085,GOA:A1JNQ1,InterPro:IPR002130,InterPro:IPR020892,InterPro:IPR029000,UniProtKB/TrEMBL:A1JNQ1,NCBI_GP:CAL13085.1;Name=CAL13085.1;gbkey=CDS;gene=ppiB;product=peptidyl-prolyl cis-trans isomerase B;protein_id=CAL13085.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3314996	3315487	.	+	.	ID=id5398;Note=Pfam match to entry PF00160 pro_isomerase%2CCyclophilin type peptidyl-prolyl cis-trans isomerase %2Cscore 217.1%2C E-value 1.7e-62;gbkey=misc_feature;gene=ppiB;inference=protein motif:PFAM:PF00160
AM286415.1	EMBL	sequence_feature	3315101	3315154	.	+	.	ID=id5399;Note=PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.;gbkey=misc_feature;gene=ppiB;inference=protein motif:Prosite:PS00170
AM286415.1	EMBL	gene	3315501	3316223	.	+	.	ID=gene3002;Name=YE3050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3050
AM286415.1	EMBL	CDS	3315501	3316223	.	+	0	ID=cds2916;Parent=gene3002;Dbxref=EnsemblGenomes-Gn:YE3050,EnsemblGenomes-Tr:CAL13086,GOA:A1JNQ2,InterPro:IPR010138,InterPro:IPR024654,InterPro:IPR029052,NCBI_GP:CAL13086.1;Name=CAL13086.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13086.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3315501	3316097	.	+	.	ID=id5400;Note=Pfam match to entry PF00149 Metallophos%2CCalcineurin-like phosphoesterase%2C score 54.9%2C E-value 1.2e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00149
AM286415.1	EMBL	gene	3316400	3316924	.	+	.	ID=gene3003;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=YE3051
AM286415.1	EMBL	CDS	3316400	3316924	.	+	0	ID=cds2917;Parent=gene3003;Dbxref=EnsemblGenomes-Gn:YE3051,EnsemblGenomes-Tr:CAL13087,GOA:A1JNQ3,InterPro:IPR000031,InterPro:IPR024694,UniProtKB/TrEMBL:A1JNQ3,NCBI_GP:CAL13087.1;Name=CAL13087.1;gbkey=CDS;gene=purE;product=phosphoribosylaminoimidazole carboxylase catalytic subunit PurE;protein_id=CAL13087.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3316436	3316912	.	+	.	ID=id5401;Note=Pfam match to entry PF00731 AIRC%2C AIR carboxylase %2Cscore 326.0%2C E-value 2.7e-95;gbkey=misc_feature;gene=purE;inference=protein motif:PFAM:PF00731
AM286415.1	EMBL	gene	3316921	3317985	.	+	.	ID=gene3004;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=YE3052
AM286415.1	EMBL	CDS	3316921	3317985	.	+	0	ID=cds2918;Parent=gene3004;Dbxref=EnsemblGenomes-Gn:YE3052,EnsemblGenomes-Tr:CAL13088,GOA:A1JNQ4,InterPro:IPR003135,InterPro:IPR005875,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR013816,InterPro:IPR016185,UniProtKB/TrEMBL:A1JNQ4,NCBI_GP:CAL13088.1;Name=CAL13088.1;gbkey=CDS;gene=purK;product=phosphoribosylaminoimidazole carboxylase ATPase subunit PurK;protein_id=CAL13088.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3317008	3317421	.	+	.	ID=id5402;Note=Pfam match to entry PF02222 ATP-grasp%2C ATP-grasp domain%2C score 48.7%2C E-value 8.4e-12;gbkey=misc_feature;gene=purK;inference=protein motif:PFAM:PF02222
AM286415.1	EMBL	sequence_feature	3317419	3317442	.	+	.	ID=id5403;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=purK;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3318139	3320565	.	-	.	ID=gene3005;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=YE3053
AM286415.1	EMBL	CDS	3318139	3320565	.	-	0	ID=cds2919;Parent=gene3005;Dbxref=EnsemblGenomes-Gn:YE3053,EnsemblGenomes-Tr:CAL13089,GOA:A1JNQ5,InterPro:IPR003838,UniProtKB/TrEMBL:A1JNQ5,NCBI_GP:CAL13089.1;Name=CAL13089.1;gbkey=CDS;gene=ybbP;product=putative permease;protein_id=CAL13089.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3318154	3318531	.	-	.	ID=id5404;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score 54.4%2C E-value 1.7e-13;gbkey=misc_feature;gene=ybbP;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	sequence_feature	3320461	3320529	.	-	.	ID=id5405;Note=10 probable transmembrane helices predicted for YE3053 by TMHMM2.0 at aa 13-35%2C 243-265%2C 291-313%2C 333-355%2C376-398%2C 408-430%2C 451-473%2C 682-704%2C 736-758 and 773-795;gbkey=misc_feature;gene=ybbP;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	3319771	3319839	.	-	.	ID=id5405;Note=10 probable transmembrane helices predicted for YE3053 by TMHMM2.0 at aa 13-35%2C 243-265%2C 291-313%2C 333-355%2C376-398%2C 408-430%2C 451-473%2C 682-704%2C 736-758 and 773-795;gbkey=misc_feature;gene=ybbP;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	3319627	3319695	.	-	.	ID=id5405;Note=10 probable transmembrane helices predicted for YE3053 by TMHMM2.0 at aa 13-35%2C 243-265%2C 291-313%2C 333-355%2C376-398%2C 408-430%2C 451-473%2C 682-704%2C 736-758 and 773-795;gbkey=misc_feature;gene=ybbP;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	3319501	3319569	.	-	.	ID=id5405;Note=10 probable transmembrane helices predicted for YE3053 by TMHMM2.0 at aa 13-35%2C 243-265%2C 291-313%2C 333-355%2C376-398%2C 408-430%2C 451-473%2C 682-704%2C 736-758 and 773-795;gbkey=misc_feature;gene=ybbP;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	3319372	3319440	.	-	.	ID=id5405;Note=10 probable transmembrane helices predicted for YE3053 by TMHMM2.0 at aa 13-35%2C 243-265%2C 291-313%2C 333-355%2C376-398%2C 408-430%2C 451-473%2C 682-704%2C 736-758 and 773-795;gbkey=misc_feature;gene=ybbP;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	3319276	3319344	.	-	.	ID=id5405;Note=10 probable transmembrane helices predicted for YE3053 by TMHMM2.0 at aa 13-35%2C 243-265%2C 291-313%2C 333-355%2C376-398%2C 408-430%2C 451-473%2C 682-704%2C 736-758 and 773-795;gbkey=misc_feature;gene=ybbP;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	3319147	3319215	.	-	.	ID=id5405;Note=10 probable transmembrane helices predicted for YE3053 by TMHMM2.0 at aa 13-35%2C 243-265%2C 291-313%2C 333-355%2C376-398%2C 408-430%2C 451-473%2C 682-704%2C 736-758 and 773-795;gbkey=misc_feature;gene=ybbP;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	3318454	3318522	.	-	.	ID=id5405;Note=10 probable transmembrane helices predicted for YE3053 by TMHMM2.0 at aa 13-35%2C 243-265%2C 291-313%2C 333-355%2C376-398%2C 408-430%2C 451-473%2C 682-704%2C 736-758 and 773-795;gbkey=misc_feature;gene=ybbP;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	3318292	3318360	.	-	.	ID=id5405;Note=10 probable transmembrane helices predicted for YE3053 by TMHMM2.0 at aa 13-35%2C 243-265%2C 291-313%2C 333-355%2C376-398%2C 408-430%2C 451-473%2C 682-704%2C 736-758 and 773-795;gbkey=misc_feature;gene=ybbP;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3318181	3318249	.	-	.	ID=id5405;Note=10 probable transmembrane helices predicted for YE3053 by TMHMM2.0 at aa 13-35%2C 243-265%2C 291-313%2C 333-355%2C376-398%2C 408-430%2C 451-473%2C 682-704%2C 736-758 and 773-795;gbkey=misc_feature;gene=ybbP;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	3319474	3319860	.	-	.	ID=id5406;Note=Pfam match to entry PF02687 DUF214%2C Predicted permease%2C score 70.0%2C E-value 3.3e-18;gbkey=misc_feature;gene=ybbP;inference=protein motif:PFAM:PF02687
AM286415.1	EMBL	sequence_feature	3320482	3320514	.	-	.	ID=id5407;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ybbP;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3320562	3321248	.	-	.	ID=gene3006;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=YE3054
AM286415.1	EMBL	CDS	3320562	3321248	.	-	0	ID=cds2920;Parent=gene3006;Dbxref=EnsemblGenomes-Gn:YE3054,EnsemblGenomes-Tr:CAL13090,GOA:A1JNQ6,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNQ6,NCBI_GP:CAL13090.1;Name=CAL13090.1;gbkey=CDS;gene=ybbA;product=putative ABC transporter ATP-binding protein;protein_id=CAL13090.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3320583	3321143	.	-	.	ID=id5408;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 196.3%2C E-value 3e-56;gbkey=misc_feature;gene=ybbA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3320766	3320810	.	-	.	ID=id5409;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=ybbA;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	3321099	3321122	.	-	.	ID=id5410;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ybbA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3321216	3321854	.	+	.	ID=gene3007;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;gene_synonym=apeA,pldC;locus_tag=YE3055
AM286415.1	EMBL	CDS	3321216	3321854	.	+	0	ID=cds2921;Parent=gene3007;Dbxref=EnsemblGenomes-Gn:YE3055,EnsemblGenomes-Tr:CAL13091,GOA:A1JNE7,InterPro:IPR008265,InterPro:IPR013831,UniProtKB/TrEMBL:A1JNE7,NCBI_GP:CAL13091.1;Name=CAL13091.1;gbkey=CDS;gene=tesA;product=putative acyl-CoA thioesterase;protein_id=CAL13091.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3321249	3321317	.	+	.	ID=id5411;Note=1 probable transmembrane helix predicted for YE3055 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;gene=tesA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3321303	3321548	.	+	.	ID=id5412;Note=Pfam match to entry PF00657 Lipase_GDSL%2CLipase/Acylhydrolase with GDSL-like motif%2C score 64.2%2CE-value 1.8e-16;gbkey=misc_feature;gene=tesA;inference=protein motif:PFAM:PF00657
AM286415.1	EMBL	sequence_feature	3321306	3321338	.	+	.	ID=id5413;Note=PS01098 Lipolytic enzymes G-D-S-L family%2C serine active site.;gbkey=misc_feature;gene=tesA;inference=protein motif:Prosite:PS01098
AM286415.1	EMBL	gene	3321900	3322676	.	+	.	ID=gene3008;Name=ybbO;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=YE3056
AM286415.1	EMBL	CDS	3321900	3322676	.	+	0	ID=cds2922;Parent=gene3008;Dbxref=EnsemblGenomes-Gn:YE3056,EnsemblGenomes-Tr:CAL13092,GOA:A1JNF0,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,UniProtKB/TrEMBL:A1JNF0,NCBI_GP:CAL13092.1;Name=CAL13092.1;gbkey=CDS;gene=ybbO;product=probable short-chain dehydrogenase;protein_id=CAL13092.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3321900	3322646	.	+	.	ID=id5414;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 176.7%2C E-value 2.4e-50;gbkey=misc_feature;gene=ybbO;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	sequence_feature	3322296	3322382	.	+	.	ID=id5415;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=ybbO;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	gene	3322748	3323617	.	+	.	ID=gene3009;Name=ybbN;gbkey=Gene;gene=ybbN;gene_biotype=protein_coding;locus_tag=YE3057
AM286415.1	EMBL	CDS	3322748	3323617	.	+	0	ID=cds2923;Parent=gene3009;Dbxref=EnsemblGenomes-Gn:YE3057,EnsemblGenomes-Tr:CAL13093,GOA:A1JNF2,InterPro:IPR005746,InterPro:IPR011990,InterPro:IPR012336,InterPro:IPR013766,UniProtKB/TrEMBL:A1JNF2,NCBI_GP:CAL13093.1;Name=CAL13093.1;gbkey=CDS;gene=ybbN;product=putative thioredoxin;protein_id=CAL13093.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3322754	3323080	.	+	.	ID=id5416;Note=Pfam match to entry PF00085 thiored%2C Thioredoxin %2Cscore 61.6%2C E-value 1.1e-15;gbkey=misc_feature;gene=ybbN;inference=protein motif:PFAM:PF00085
AM286415.1	EMBL	sequence_feature	3323039	3323068	.	+	.	ID=id5417;Note=PS00215 Mitochondrial energy transfer proteins signature.;gbkey=misc_feature;gene=ybbN;inference=protein motif:Prosite:PS00215
AM286415.1	EMBL	gene	3323815	3324729	.	+	.	ID=gene3010;Name=YE3058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3058
AM286415.1	EMBL	CDS	3323815	3324729	.	+	0	ID=cds2924;Parent=gene3010;Dbxref=EnsemblGenomes-Gn:YE3058,EnsemblGenomes-Tr:CAL13094,GOA:A1JN90,InterPro:IPR001107,InterPro:IPR001972,InterPro:IPR018080,UniProtKB/TrEMBL:A1JN90,NCBI_GP:CAL13094.1;Name=CAL13094.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13094.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3323833	3323901	.	+	.	ID=id5418;Note=1 probable transmembrane helix predicted for YE3058 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3323869	3324393	.	+	.	ID=id5419;Note=Pfam match to entry PF01145 Band_7%2C SPFH domain / Band 7 family%2C score 262.2%2C E-value 4.5e-76;gbkey=misc_feature;inference=protein motif:PFAM:PF01145
AM286415.1	EMBL	sequence_feature	3324208	3324294	.	+	.	ID=id5420;Note=PS01270 Band 7 protein family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01270
AM286415.1	EMBL	gene	3324732	3325181	.	+	.	ID=gene3011;Name=ybbJ;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=YE3059
AM286415.1	EMBL	CDS	3324732	3325181	.	+	0	ID=cds2925;Parent=gene3011;Dbxref=EnsemblGenomes-Gn:YE3059,EnsemblGenomes-Tr:CAL13095,InterPro:IPR002810,InterPro:IPR012340,UniProtKB/TrEMBL:A1JN93,NCBI_GP:CAL13095.1;Name=CAL13095.1;gbkey=CDS;gene=ybbJ;product=putative membrane protein;protein_id=CAL13095.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3324750	3324809	.	+	.	ID=id5421;Note=3 probable transmembrane helices predicted for YE3059 by TMHMM2.0 at aa 7-26%2C 31-53 and 58-75;gbkey=misc_feature;gene=ybbJ;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3324822	3324890	.	+	.	ID=id5421;Note=3 probable transmembrane helices predicted for YE3059 by TMHMM2.0 at aa 7-26%2C 31-53 and 58-75;gbkey=misc_feature;gene=ybbJ;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3324903	3324956	.	+	.	ID=id5421;Note=3 probable transmembrane helices predicted for YE3059 by TMHMM2.0 at aa 7-26%2C 31-53 and 58-75;gbkey=misc_feature;gene=ybbJ;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3325227	3325646	.	-	.	ID=gene3012;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=YE3060
AM286415.1	EMBL	CDS	3325227	3325646	.	-	0	ID=cds2926;Parent=gene3012;Dbxref=EnsemblGenomes-Gn:YE3060,EnsemblGenomes-Tr:CAL13096,GOA:A1JN95,InterPro:IPR000551,InterPro:IPR009061,InterPro:IPR011789,UniProtKB/TrEMBL:A1JN95,NCBI_GP:CAL13096.1;Name=CAL13096.1;gbkey=CDS;gene=cueR;product=putative regulatory protein;protein_id=CAL13096.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3325530	3325637	.	-	.	ID=id5422;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 51.8%2C E-value 9.6e-13;gbkey=misc_feature;gene=cueR;inference=protein motif:PFAM:PF00376
AM286415.1	EMBL	gene	3325843	3328599	.	+	.	ID=gene3013;Name=ybaR;gbkey=Gene;gene=ybaR;gene_biotype=protein_coding;locus_tag=YE3061
AM286415.1	EMBL	CDS	3325843	3328599	.	+	0	ID=cds2927;Parent=gene3013;Dbxref=EnsemblGenomes-Gn:YE3061,EnsemblGenomes-Tr:CAL13097,GOA:A1JN96,InterPro:IPR001757,InterPro:IPR006121,InterPro:IPR008250,InterPro:IPR017969,InterPro:IPR018303,InterPro:IPR023214,InterPro:IPR023299,InterPro:IPR027256,UniProtKB/TrEMBL:A1JN96,NCBI_GP:CAL13097.1;Name=CAL13097.1;gbkey=CDS;gene=ybaR;product=putative cation-transporting ATPase;protein_id=CAL13097.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3325855	3326037	.	+	.	ID=id5423;Note=Pfam match to entry PF00403 HMA%2CHeavy-metal-associated domain%2C score 48.6%2C E-value 9e-12;gbkey=misc_feature;gene=ybaR;inference=protein motif:PFAM:PF00403
AM286415.1	EMBL	sequence_feature	3325867	3325956	.	+	.	ID=id5424;Note=PS01047 Heavy-metal-associated domain.;gbkey=misc_feature;gene=ybaR;inference=protein motif:Prosite:PS01047
AM286415.1	EMBL	sequence_feature	3326053	3326235	.	+	.	ID=id5425;Note=Pfam match to entry PF00403 HMA%2CHeavy-metal-associated domain%2C score 61.0%2C E-value 1.6e-15;gbkey=misc_feature;gene=ybaR;inference=protein motif:PFAM:PF00403
AM286415.1	EMBL	sequence_feature	3326392	3326424	.	+	.	ID=id5426;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ybaR;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3326395	3326583	.	+	.	ID=id5427;Note=Pfam match to entry PF00403 HMA%2CHeavy-metal-associated domain%2C score 87.7%2C E-value 1.6e-23;gbkey=misc_feature;gene=ybaR;inference=protein motif:PFAM:PF00403
AM286415.1	EMBL	sequence_feature	3326407	3326496	.	+	.	ID=id5428;Note=PS01047 Heavy-metal-associated domain.;gbkey=misc_feature;gene=ybaR;inference=protein motif:Prosite:PS01047
AM286415.1	EMBL	sequence_feature	3326659	3326727	.	+	.	ID=id5429;Note=8 probable transmembrane helices predicted for YE3061 by TMHMM2.0 at aa 273-295%2C 305-327%2C 339-358%2C368-385%2C 520-542%2C 547-569%2C 862-881 and 886-908;gbkey=misc_feature;gene=ybaR;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3326755	3326823	.	+	.	ID=id5429;Note=8 probable transmembrane helices predicted for YE3061 by TMHMM2.0 at aa 273-295%2C 305-327%2C 339-358%2C368-385%2C 520-542%2C 547-569%2C 862-881 and 886-908;gbkey=misc_feature;gene=ybaR;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3326857	3326916	.	+	.	ID=id5429;Note=8 probable transmembrane helices predicted for YE3061 by TMHMM2.0 at aa 273-295%2C 305-327%2C 339-358%2C368-385%2C 520-542%2C 547-569%2C 862-881 and 886-908;gbkey=misc_feature;gene=ybaR;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3326944	3326997	.	+	.	ID=id5429;Note=8 probable transmembrane helices predicted for YE3061 by TMHMM2.0 at aa 273-295%2C 305-327%2C 339-358%2C368-385%2C 520-542%2C 547-569%2C 862-881 and 886-908;gbkey=misc_feature;gene=ybaR;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3327400	3327468	.	+	.	ID=id5429;Note=8 probable transmembrane helices predicted for YE3061 by TMHMM2.0 at aa 273-295%2C 305-327%2C 339-358%2C368-385%2C 520-542%2C 547-569%2C 862-881 and 886-908;gbkey=misc_feature;gene=ybaR;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3327481	3327549	.	+	.	ID=id5429;Note=8 probable transmembrane helices predicted for YE3061 by TMHMM2.0 at aa 273-295%2C 305-327%2C 339-358%2C368-385%2C 520-542%2C 547-569%2C 862-881 and 886-908;gbkey=misc_feature;gene=ybaR;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3328426	3328485	.	+	.	ID=id5429;Note=8 probable transmembrane helices predicted for YE3061 by TMHMM2.0 at aa 273-295%2C 305-327%2C 339-358%2C368-385%2C 520-542%2C 547-569%2C 862-881 and 886-908;gbkey=misc_feature;gene=ybaR;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3328498	3328566	.	+	.	ID=id5429;Note=8 probable transmembrane helices predicted for YE3061 by TMHMM2.0 at aa 273-295%2C 305-327%2C 339-358%2C368-385%2C 520-542%2C 547-569%2C 862-881 and 886-908;gbkey=misc_feature;gene=ybaR;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	3326965	3327633	.	+	.	ID=id5430;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 289.9%2C E-value 2e-84;gbkey=misc_feature;gene=ybaR;inference=protein motif:PFAM:PF00122
AM286415.1	EMBL	sequence_feature	3327499	3327531	.	+	.	ID=id5431;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ybaR;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3327643	3328317	.	+	.	ID=id5432;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 131.5%2C E-value 9.7e-37;gbkey=misc_feature;gene=ybaR;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	3327661	3327681	.	+	.	ID=id5433;Note=PS00154 E1-E2 ATPases phosphorylation site.;gbkey=misc_feature;gene=ybaR;inference=protein motif:Prosite:PS00154
AM286415.1	EMBL	sequence_feature	3328246	3328314	.	+	.	ID=id5434;Note=PS01229 Hypothetical cof family signature 2.;gbkey=misc_feature;gene=ybaR;inference=protein motif:Prosite:PS01229
AM286415.1	EMBL	gene	3328681	3329490	.	+	.	ID=gene3014;Name=YE3062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3062
AM286415.1	EMBL	CDS	3328681	3329490	.	+	0	ID=cds2928;Parent=gene3014;Dbxref=EnsemblGenomes-Gn:YE3062,EnsemblGenomes-Tr:CAL13098,InterPro:IPR002816,UniProtKB/TrEMBL:A1JN26,NCBI_GP:CAL13098.1;Name=CAL13098.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13098.1;transl_table=11
AM286415.1	EMBL	transcript	3329500	3329583	.	-	.	ID=rna113;Note=sroB RNA (RF00368) as predicted by Rfam%2C score 31.18%2C positions 1 to 80;gbkey=misc_RNA
AM286415.1	EMBL	exon	3329500	3329583	.	-	.	ID=id5435;Parent=rna113;Note=sroB RNA (RF00368) as predicted by Rfam%2C score 31.18%2C positions 1 to 80;gbkey=misc_RNA
AM286415.1	EMBL	gene	3329766	3330245	.	+	.	ID=gene3015;Name=YE3063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3063
AM286415.1	EMBL	CDS	3329766	3330245	.	+	0	ID=cds2929;Parent=gene3015;Dbxref=EnsemblGenomes-Gn:YE3063,EnsemblGenomes-Tr:CAL13099,GOA:A1JMZ7,InterPro:IPR004369,InterPro:IPR007214,UniProtKB/TrEMBL:A1JMZ7,NCBI_GP:CAL13099.1;Name=CAL13099.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13099.1;transl_table=11
AM286415.1	EMBL	repeat_region	3330857	3332239	.	+	.	ID=id5436;Note=Insertion sequence element IS1667;gbkey=repeat_region
AM286415.1	EMBL	gene	3330944	3331963	.	+	.	ID=gene3016;Name=YE3064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3064
AM286415.1	EMBL	CDS	3330944	3331963	.	+	0	ID=cds2930;Parent=gene3016;Dbxref=EnsemblGenomes-Gn:YE3064,EnsemblGenomes-Tr:CAL13100,GOA:A1JL33,InterPro:IPR002525,InterPro:IPR003346,UniProtKB/TrEMBL:A1JL33,NCBI_GP:CAL13100.1;Name=CAL13100.1;Note=Similar to Pseudomonas putida transposase Tnpa1 protein SWALL:Q9K2X6 (EMBL:AJ288911) (344 aa) fasta scores: E(): 5.7e-56%2C 45.93 38d in 344 aa and to Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 1.3e-49%2C 42.16 38d in 332 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=putative transposase for IS1667;protein_id=CAL13100.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3331133	3331411	.	+	.	ID=id5437;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 30.3%2C E-value 2.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	sequence_feature	3331502	3331831	.	+	.	ID=id5438;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 102.0%2CE-value 7.7e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	gene	3332365	3334017	.	-	.	ID=gene3017;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=YE3066
AM286415.1	EMBL	CDS	3332365	3334017	.	-	0	ID=cds2931;Parent=gene3017;Dbxref=EnsemblGenomes-Gn:YE3066,EnsemblGenomes-Tr:CAL13101,GOA:Q56878,InterPro:IPR004843,InterPro:IPR006146,InterPro:IPR006179,InterPro:IPR008334,InterPro:IPR029052,NCBI_GP:CAL13101.1;Name=CAL13101.1;gbkey=CDS;gene=ushA;product=UDP-sugar hydrolase;protein_id=CAL13101.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3332485	3332931	.	-	.	ID=id5439;Note=Pfam match to entry PF02872 5_nucleotidaseC%2C5'-nucleotidase%2C C-terminal domain%2C score 179.7%2C E-value 3.1e-51;gbkey=misc_feature;gene=ushA;inference=protein motif:PFAM:PF02872
AM286415.1	EMBL	sequence_feature	3333250	3333918	.	-	.	ID=id5440;Note=Pfam match to entry PF00149 Metallophos%2CCalcineurin-like phosphoesterase%2C score 76.4%2C E-value 3.8e-20;gbkey=misc_feature;gene=ushA;inference=protein motif:PFAM:PF00149
AM286415.1	EMBL	sequence_feature	3333658	3333693	.	-	.	ID=id5441;Note=PS00786 5'-nucleotidase signature 2.;gbkey=misc_feature;gene=ushA;inference=protein motif:Prosite:PS00786
AM286415.1	EMBL	sequence_feature	3333880	3333918	.	-	.	ID=id5442;Note=PS00785 5'-nucleotidase signature 1.;gbkey=misc_feature;gene=ushA;inference=protein motif:Prosite:PS00785
AM286415.1	EMBL	gene	3334410	3335516	.	+	.	ID=gene3018;Name=rosA;gbkey=Gene;gene=rosA;gene_biotype=protein_coding;gene_synonym=fsr;locus_tag=YE3067
AM286415.1	EMBL	CDS	3334410	3335516	.	+	0	ID=cds2932;Parent=gene3018;Dbxref=EnsemblGenomes-Gn:YE3067,EnsemblGenomes-Tr:CAL13102,GOA:A1JMU3,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JMU3,NCBI_GP:CAL13102.1;Name=CAL13102.1;gbkey=CDS;gene=rosA;product=putative membrane efflux protein;protein_id=CAL13102.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3334470	3334538	.	+	.	ID=id5443;Note=10 probable transmembrane helices predicted for YE3067 by TMHMM2.0 at aa 21-43%2C 58-92%2C 113-135%2C 140-159%2C191-213%2C 228-250%2C 257-276%2C 280-302%2C 315-337 and 342-364;gbkey=misc_feature;gene=rosA;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	3334581	3334685	.	+	.	ID=id5443;Note=10 probable transmembrane helices predicted for YE3067 by TMHMM2.0 at aa 21-43%2C 58-92%2C 113-135%2C 140-159%2C191-213%2C 228-250%2C 257-276%2C 280-302%2C 315-337 and 342-364;gbkey=misc_feature;gene=rosA;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	3334746	3334814	.	+	.	ID=id5443;Note=10 probable transmembrane helices predicted for YE3067 by TMHMM2.0 at aa 21-43%2C 58-92%2C 113-135%2C 140-159%2C191-213%2C 228-250%2C 257-276%2C 280-302%2C 315-337 and 342-364;gbkey=misc_feature;gene=rosA;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	3334827	3334886	.	+	.	ID=id5443;Note=10 probable transmembrane helices predicted for YE3067 by TMHMM2.0 at aa 21-43%2C 58-92%2C 113-135%2C 140-159%2C191-213%2C 228-250%2C 257-276%2C 280-302%2C 315-337 and 342-364;gbkey=misc_feature;gene=rosA;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	3334980	3335048	.	+	.	ID=id5443;Note=10 probable transmembrane helices predicted for YE3067 by TMHMM2.0 at aa 21-43%2C 58-92%2C 113-135%2C 140-159%2C191-213%2C 228-250%2C 257-276%2C 280-302%2C 315-337 and 342-364;gbkey=misc_feature;gene=rosA;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	3335091	3335159	.	+	.	ID=id5443;Note=10 probable transmembrane helices predicted for YE3067 by TMHMM2.0 at aa 21-43%2C 58-92%2C 113-135%2C 140-159%2C191-213%2C 228-250%2C 257-276%2C 280-302%2C 315-337 and 342-364;gbkey=misc_feature;gene=rosA;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	3335178	3335237	.	+	.	ID=id5443;Note=10 probable transmembrane helices predicted for YE3067 by TMHMM2.0 at aa 21-43%2C 58-92%2C 113-135%2C 140-159%2C191-213%2C 228-250%2C 257-276%2C 280-302%2C 315-337 and 342-364;gbkey=misc_feature;gene=rosA;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	3335247	3335315	.	+	.	ID=id5443;Note=10 probable transmembrane helices predicted for YE3067 by TMHMM2.0 at aa 21-43%2C 58-92%2C 113-135%2C 140-159%2C191-213%2C 228-250%2C 257-276%2C 280-302%2C 315-337 and 342-364;gbkey=misc_feature;gene=rosA;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	3335352	3335420	.	+	.	ID=id5443;Note=10 probable transmembrane helices predicted for YE3067 by TMHMM2.0 at aa 21-43%2C 58-92%2C 113-135%2C 140-159%2C191-213%2C 228-250%2C 257-276%2C 280-302%2C 315-337 and 342-364;gbkey=misc_feature;gene=rosA;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3335433	3335501	.	+	.	ID=id5443;Note=10 probable transmembrane helices predicted for YE3067 by TMHMM2.0 at aa 21-43%2C 58-92%2C 113-135%2C 140-159%2C191-213%2C 228-250%2C 257-276%2C 280-302%2C 315-337 and 342-364;gbkey=misc_feature;gene=rosA;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	3335753	3337444	.	+	.	ID=gene3019;Name=rosB;gbkey=Gene;gene=rosB;gene_biotype=protein_coding;gene_synonym=ybaL;locus_tag=YE3068
AM286415.1	EMBL	CDS	3335753	3337444	.	+	0	ID=cds2933;Parent=gene3019;Dbxref=EnsemblGenomes-Gn:YE3068,EnsemblGenomes-Tr:CAL13103,GOA:A1JMU5,InterPro:IPR003148,InterPro:IPR004771,InterPro:IPR006153,InterPro:IPR016040,UniProtKB/TrEMBL:A1JMU5,NCBI_GP:CAL13103.1;Name=CAL13103.1;gbkey=CDS;gene=rosB;product=putative potassium antiporter;protein_id=CAL13103.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3335762	3335830	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	3335849	3335908	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	3335918	3335986	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	3336011	3336079	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	3336092	3336160	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	3336197	3336265	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	3336308	3336376	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	3336437	3336505	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	3336656	3336724	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	3336758	3336826	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	3336854	3336913	.	+	.	ID=id5444;Note=11 probable transmembrane helices predicted for YE3068 by TMHMM2.0 at aa 4-26%2C 33-52%2C 56-78%2C 87-109%2C114-136%2C 149-171%2C 186-208%2C 229-251%2C 302-324%2C 336-358 and 368-387;gbkey=misc_feature;gene=rosB;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	3335774	3336937	.	+	.	ID=id5445;Note=Pfam match to entry PF00999 Na_H_Exchanger%2CSodium/hydrogen exchanger family%2C score 52.2%2C E-value 7.4e-13;gbkey=misc_feature;gene=rosB;inference=protein motif:PFAM:PF00999
AM286415.1	EMBL	sequence_feature	3336680	3336703	.	+	.	ID=id5446;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=rosB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3337007	3337357	.	+	.	ID=id5447;Note=Pfam match to entry PF02254 TrkA-N%2C TrkA-N domain %2Cscore 112.9%2C E-value 4e-31;gbkey=misc_feature;gene=rosB;inference=protein motif:PFAM:PF02254
AM286415.1	EMBL	gene	3337519	3338823	.	-	.	ID=gene3020;Name=gsk;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=YE3069
AM286415.1	EMBL	CDS	3337519	3338823	.	-	0	ID=cds2934;Parent=gene3020;Dbxref=EnsemblGenomes-Gn:YE3069,EnsemblGenomes-Tr:CAL13104,GOA:A1JMU9,InterPro:IPR011611,InterPro:IPR029056,UniProtKB/TrEMBL:A1JMU9,NCBI_GP:CAL13104.1;Name=CAL13104.1;gbkey=CDS;gene=gsk;product=inosine-guanosine kinase;protein_id=CAL13104.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3337555	3338670	.	-	.	ID=id5448;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 93.8%2C E-value 2.2e-25;gbkey=misc_feature;gene=gsk;inference=protein motif:PFAM:PF00294
AM286415.1	EMBL	sequence_feature	3337729	3337770	.	-	.	ID=id5449;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;gbkey=misc_feature;gene=gsk;inference=protein motif:Prosite:PS00584
AM286415.1	EMBL	gene	3339012	3340103	.	-	.	ID=gene3021;Name=wzz;gbkey=Gene;gene=wzz;gene_biotype=protein_coding;gene_synonym=cld;locus_tag=YE3070
AM286415.1	EMBL	CDS	3339012	3340103	.	-	0	ID=cds2935;Parent=gene3021;Dbxref=EnsemblGenomes-Gn:YE3070,EnsemblGenomes-Tr:CAL13105,GOA:A1JMR4,InterPro:IPR003856,UniProtKB/TrEMBL:A1JMR4,NCBI_GP:CAL13105.1;Name=CAL13105.1;gbkey=CDS;gene=wzz;product=O-antigen chain length determinant;protein_id=CAL13105.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3339918	3339977	.	-	.	ID=id5450;Note=2 probable transmembrane helices predicted for YE3070 by TMHMM2.0 at aa 43-62 and 328-350;gbkey=misc_feature;gene=wzz;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3339054	3339122	.	-	.	ID=id5450;Note=2 probable transmembrane helices predicted for YE3070 by TMHMM2.0 at aa 43-62 and 328-350;gbkey=misc_feature;gene=wzz;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	3339630	3340028	.	-	.	ID=id5451;Note=Pfam match to entry PF02706 wzz%2C Chain length determinant protein%2C score 100.9%2C E-value 1.6e-27;gbkey=misc_feature;gene=wzz;inference=protein motif:PFAM:PF02706
AM286415.1	EMBL	gene	3340149	3341159	.	-	.	ID=gene3022;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=YE3071
AM286415.1	EMBL	CDS	3340149	3341159	.	-	0	ID=cds2936;Parent=gene3022;Dbxref=EnsemblGenomes-Gn:YE3071,EnsemblGenomes-Tr:CAL13106,GOA:A1JMR6,InterPro:IPR001509,InterPro:IPR005886,InterPro:IPR016040,InterPro:IPR025308,UniProtKB/TrEMBL:A1JMR6,NCBI_GP:CAL13106.1;Name=CAL13106.1;Note=Previously sequenced as Yersinia enterocolitica UDP-glucose 4-epimerase GalE SWALL:GALE_YEREN (SWALL:Q57301) (336 aa) fasta scores: E(): 4.3e-132%2C 99.7 id in 336 aa. Similar to Edwardsiella ictaluri UDP-galactose 4-epimerase GalE SWALL:Q937X4 (EMBL:AY057452) (338 aa) fasta scores: E(): 6.6e-87%2C64.88 38d in 336 aa;gbkey=CDS;gene=galE;inference=similar to sequence:UniProtKB:Q57301;product=UDP-glucose 4-epimerase;protein_id=CAL13106.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3340167	3341153	.	-	.	ID=id5452;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 503.8%2CE-value 8.3e-149;gbkey=misc_feature;gene=galE;inference=protein motif:PFAM:PF01370
AM286415.1	EMBL	gene	3341221	3342591	.	-	.	ID=gene3023;Name=manB;gbkey=Gene;gene=manB;gene_biotype=protein_coding;gene_synonym=rfbK;locus_tag=YE3072
AM286415.1	EMBL	CDS	3341221	3342591	.	-	0	ID=cds2937;Parent=gene3023;Dbxref=EnsemblGenomes-Gn:YE3072,EnsemblGenomes-Tr:CAL13107,GOA:A1JMR8,InterPro:IPR005841,InterPro:IPR005843,InterPro:IPR005844,InterPro:IPR005845,InterPro:IPR005846,InterPro:IPR016055,InterPro:IPR016066,UniProtKB/TrEMBL:A1JMR8,NCBI_GP:CAL13107.1;Name=CAL13107.1;gbkey=CDS;gene=manB;product=phosphomannomutase;protein_id=CAL13107.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3341224	3341460	.	-	.	ID=id5453;Note=Pfam match to entry PF00408 PGM_PMM%2CPhosphoglucomutase/phosphomannomutase%2C C-terminal domain %2Cscore 73.4%2C E-value 3e-19;gbkey=misc_feature;gene=manB;inference=protein motif:PFAM:PF00408
AM286415.1	EMBL	sequence_feature	3341473	3341808	.	-	.	ID=id5454;Note=Pfam match to entry PF02880 PGM_PMM_III%2CPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain III%2C score 163.7%2C E-value 2.1e-46;gbkey=misc_feature;gene=manB;inference=protein motif:PFAM:PF02880
AM286415.1	EMBL	sequence_feature	3341812	3342135	.	-	.	ID=id5455;Note=Pfam match to entry PF02879 PGM_PMM_II%2CPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II%2C score 179.7%2C E-value 3e-51;gbkey=misc_feature;gene=manB;inference=protein motif:PFAM:PF02879
AM286415.1	EMBL	sequence_feature	3342169	3342591	.	-	.	ID=id5456;Note=Pfam match to entry PF02878 PGM_PMM_I%2CPhosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain I%2C score 162.8%2C E-value 3.9e-46;gbkey=misc_feature;gene=manB;inference=protein motif:PFAM:PF02878
AM286415.1	EMBL	sequence_feature	3342274	3342318	.	-	.	ID=id5457;Note=PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature.;gbkey=misc_feature;gene=manB;inference=protein motif:Prosite:PS00710
AM286415.1	EMBL	gene	3342603	3344000	.	-	.	ID=gene3024;Name=manC;gbkey=Gene;gene=manC;gene_biotype=protein_coding;gene_synonym=rfbM;locus_tag=YE3073
AM286415.1	EMBL	CDS	3342603	3344000	.	-	0	ID=cds2938;Parent=gene3024;Dbxref=EnsemblGenomes-Gn:YE3073,EnsemblGenomes-Tr:CAL13108,GOA:A1JN58,InterPro:IPR001538,InterPro:IPR005835,InterPro:IPR006375,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR029044,UniProtKB/TrEMBL:A1JN58,NCBI_GP:CAL13108.1;Name=CAL13108.1;gbkey=CDS;gene=manC;product=mannose-1-phosphate guanylyltransferase;protein_id=CAL13108.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3342612	3343112	.	-	.	ID=id5458;Note=Pfam match to entry PF01050 MannoseP_isomer%2CMannose-6-phosphate isomerase%2C score 400.2%2C E-value 1.3e-117;gbkey=misc_feature;gene=manC;inference=protein motif:PFAM:PF01050
AM286415.1	EMBL	sequence_feature	3343143	3343994	.	-	.	ID=id5459;Note=Pfam match to entry PF00483 NTP_transferase%2CNucleotidyl transferase%2C score 478.4%2C E-value 3.8e-141;gbkey=misc_feature;gene=manC;inference=protein motif:PFAM:PF00483
AM286415.1	EMBL	gene	3344007	3344972	.	-	.	ID=gene3025;Name=wbcJ;gbkey=Gene;gene=wbcJ;gene_biotype=protein_coding;gene_synonym=fcl,wcaG;locus_tag=YE3074
AM286415.1	EMBL	CDS	3344007	3344972	.	-	0	ID=cds2939;Parent=gene3025;Dbxref=EnsemblGenomes-Gn:YE3074,EnsemblGenomes-Tr:CAL13109,GOA:A1JN61,InterPro:IPR001509,InterPro:IPR016040,InterPro:IPR028614,UniProtKB/TrEMBL:A1JN61,NCBI_GP:CAL13109.1;Name=CAL13109.1;Note=Similar to Escherichia coli GDP-fucose synthetase [includes: GDP-mannose-4-keto-6-d epimerase%3B GDP-4-keto-6-l-galactose reductase] Fcl or WcaG SWALL:FCL_ECOLI (SWALL:P32055) (321 aa) fasta scores: E(): 2.7e-96%2C 73.75 38d in 320 aa. Previously sequenced as Yersinia enterocolitica fucose synthetase WbcJ SWALL:Q56873 (EMBL:U46859) (321 aa) fasta scores: E(): 6.2e-127%2C 100 38d in 321 aa;gbkey=CDS;gene=wbcJ;inference=similar to sequence:UniProtKB:P32055;product=GDP-fucose synthetase;protein_id=CAL13109.1;transl_table=11
AM286415.1	EMBL	gene	3344978	3346096	.	-	.	ID=gene3026;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=YE3075
AM286415.1	EMBL	CDS	3344978	3346096	.	-	0	ID=cds2940;Parent=gene3026;Dbxref=EnsemblGenomes-Gn:YE3075,EnsemblGenomes-Tr:CAL13110,GOA:Q56872,InterPro:IPR001509,InterPro:IPR006368,InterPro:IPR016040,NCBI_GP:CAL13110.1;Name=CAL13110.1;Note=Similar to Escherichia coli GDP-mannose 4%2C6-dehydratase Gmd SWALL:GM4D_ECOLI (SWALL:P32054) (373 aa) fasta scores: E(): 2.8e-119%2C 78.7 38d in 371 aa. Previously sequenced as Yersinia enterocolitica probable GDP-mannose 4%2C6-dehydratase SWALL:GM4D_YEREN (SWALL:Q56872) (372 aa) fasta scores: E(): 3.1e-145%2C99.19 38d in 372 aa;gbkey=CDS;gene=gmd;inference=similar to sequence:UniProtKB:Q56872;product=GDP-mannose 4%2C6-dehydratase;protein_id=CAL13110.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3345038	3346087	.	-	.	ID=id5460;Note=Pfam match to entry PF01370 Epimerase%2C NAD dependent epimerase/dehydratase family%2C score 6.4%2CE-value 8e-14;gbkey=misc_feature;gene=gmd;inference=protein motif:PFAM:PF01370
AM286415.1	EMBL	sequence_feature	3345584	3345670	.	-	.	ID=id5461;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=gmd;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	gene	3346093	3347169	.	-	.	ID=gene3027;Name=wbcI;gbkey=Gene;gene=wbcI;gene_biotype=protein_coding;gene_synonym=rfpB,rfpP;locus_tag=YE3076
AM286415.1	EMBL	CDS	3346093	3347169	.	-	0	ID=cds2941;Parent=gene3027;Dbxref=EnsemblGenomes-Gn:YE3076,EnsemblGenomes-Tr:CAL13111,GOA:A1JN65,InterPro:IPR001296,InterPro:IPR028098,UniProtKB/TrEMBL:A1JN65,NCBI_GP:CAL13111.1;Name=CAL13111.1;Note=Similar to Shigella dysenteriae galactosyltransferase RfpB SWALL:Q53452 (EMBL:S73325) (377 aa) fasta scores: E(): 2.7e-11%2C 27.13 38d in 387 aa. Previously sequenced as Yersinia enterocolitica RfbP protein WbcI or RfbP SWALL:Q56871 (EMBL:U46859) (358 aa) fasta scores: E(): 2e-145%2C 100 38d in 358 aa;gbkey=CDS;gene=wbcI;inference=similar to sequence:INSDC:U46859;product=putative galactosyltransferase;protein_id=CAL13111.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3346147	3346671	.	-	.	ID=id5462;Note=Pfam match to entry PF00534 Glycos_transf_1%2CGlycosyl transferases group 1%2C score 120.5%2C E-value 2.1e-33;gbkey=misc_feature;gene=wbcI;inference=protein motif:PFAM:PF00534
AM286415.1	EMBL	gene	3347156	3348004	.	-	.	ID=gene3028;Name=wbcH;gbkey=Gene;gene=wbcH;gene_biotype=protein_coding;locus_tag=YE3077
AM286415.1	EMBL	CDS	3347156	3348004	.	-	0	ID=cds2942;Parent=gene3028;Dbxref=EnsemblGenomes-Gn:YE3077,EnsemblGenomes-Tr:CAL13112,GOA:A1JN66,InterPro:IPR002516,UniProtKB/TrEMBL:A1JN66,NCBI_GP:CAL13112.1;Name=CAL13112.1;Note=Previously sequenced as Yersinia enterocolitica WbcF protein SWALL:Q56870 (EMBL:U46859) (283 aa) fasta scores: E(): 1.7e-115%2C 99.64 38d in 283 aa. Similar to Bacteroides fragilis putative fucosyl transferase WcfB SWALL:Q9XDK2 (EMBL:AF048749) (287 aa) fasta scores: E(): 3.9e-09%2C 30.62 38d in 271 aa;gbkey=CDS;gene=wbcH;inference=similar to sequence:INSDC:U46859;product=putative glycosyl transferase;protein_id=CAL13112.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3347162	3348001	.	-	.	ID=id5463;Note=Pfam match to entry PF01531 Glyco_transf_11%2CGlycosyl transferase family 11%2C score 488.4%2C E-value 3.7e-144;gbkey=misc_feature;gene=wbcH;inference=protein motif:PFAM:PF01531
AM286415.1	EMBL	gene	3347994	3348860	.	-	.	ID=gene3029;Name=wbcG;gbkey=Gene;gene=wbcG;gene_biotype=protein_coding;locus_tag=YE3078
AM286415.1	EMBL	CDS	3347994	3348860	.	-	0	ID=cds2943;Parent=gene3029;Dbxref=EnsemblGenomes-Gn:YE3078,EnsemblGenomes-Tr:CAL13113,GOA:A1JN68,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:A1JN68,NCBI_GP:CAL13113.1;Name=CAL13113.1;Note=Previously sequenced as Yersinia enterocolitica putative WbcF glycosyltransferase WbcG SWALL:Q56869 (EMBL:U46859) (288 aa) fasta scores: E(): 1.5e-111%2C 99.65 id in 288 aa. N-terminus is similar to the N-terminal region of Vibrio cholerae sugar transferase SWALL:O34234 (EMBL:Y07786) (337 aa) fasta scores: E(): 1.1e-22%2C 40.19 id in 209 aa;gbkey=CDS;gene=wbcG;inference=similar to sequence:INSDC:Y07786;product=putative glycosyltransferase;protein_id=CAL13113.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3348360	3348839	.	-	.	ID=id5464;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 146.9%2C E-value 2.3e-41;gbkey=misc_feature;gene=wbcG;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	3348866	3349834	.	-	.	ID=gene3030;Name=wbcF;gbkey=Gene;gene=wbcF;gene_biotype=protein_coding;locus_tag=YE3079
AM286415.1	EMBL	CDS	3348866	3349834	.	-	0	ID=cds2944;Parent=gene3030;Dbxref=EnsemblGenomes-Gn:YE3079,EnsemblGenomes-Tr:CAL13114,UniProtKB/TrEMBL:A1JN71,NCBI_GP:CAL13114.1;Name=CAL13114.1;Note=Poor database matches. Previously sequenced as Yersinia enterocolitica WbcF protein SWALL:Q56868 (EMBL:U46859) (322 aa) fasta scores: E(): 2.7e-122%2C 99.37 id in 322 aa;gbkey=CDS;gene=wbcF;inference=similar to sequence:INSDC:U46859;product=hypothetical protein;protein_id=CAL13114.1;transl_table=11
AM286415.1	EMBL	gene	3349831	3350850	.	-	.	ID=gene3031;Name=wbcE;gbkey=Gene;gene=wbcE;gene_biotype=protein_coding;locus_tag=YE3080
AM286415.1	EMBL	CDS	3349831	3350850	.	-	0	ID=cds2945;Parent=gene3031;Dbxref=EnsemblGenomes-Gn:YE3080,EnsemblGenomes-Tr:CAL13115,UniProtKB/TrEMBL:A1JN72,NCBI_GP:CAL13115.1;Name=CAL13115.1;Note=Similar to Yersinia enterocolitica WbcE protein SWALL:Q56867 (EMBL:U46859) (331 aa) fasta scores: E(): 3.3e-116%2C 97.56 38d in 329 aa. Weakly similar to Lactobacillus delbrueckii EPS cluster protein EpsK SWALL:Q9F0B7 (EMBL:AF267127) (353 aa) fasta scores: E(): 0.002%2C 25 38d in 336 aa;gbkey=CDS;gene=wbcE;inference=similar to sequence:INSDC:U46859;product=putative membrane protein;protein_id=CAL13115.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3350740	3350808	.	-	.	ID=id5465;Note=9 probable transmembrane helices predicted for YE3080 by TMHMM2.0 at aa 15-37%2C 44-63%2C 106-128%2C 135-157%2C172-194%2C 201-220%2C 240-258%2C 271-293 and 303-325;gbkey=misc_feature;gene=wbcE;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3350662	3350721	.	-	.	ID=id5465;Note=9 probable transmembrane helices predicted for YE3080 by TMHMM2.0 at aa 15-37%2C 44-63%2C 106-128%2C 135-157%2C172-194%2C 201-220%2C 240-258%2C 271-293 and 303-325;gbkey=misc_feature;gene=wbcE;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3350467	3350535	.	-	.	ID=id5465;Note=9 probable transmembrane helices predicted for YE3080 by TMHMM2.0 at aa 15-37%2C 44-63%2C 106-128%2C 135-157%2C172-194%2C 201-220%2C 240-258%2C 271-293 and 303-325;gbkey=misc_feature;gene=wbcE;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3350380	3350448	.	-	.	ID=id5465;Note=9 probable transmembrane helices predicted for YE3080 by TMHMM2.0 at aa 15-37%2C 44-63%2C 106-128%2C 135-157%2C172-194%2C 201-220%2C 240-258%2C 271-293 and 303-325;gbkey=misc_feature;gene=wbcE;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3350269	3350337	.	-	.	ID=id5465;Note=9 probable transmembrane helices predicted for YE3080 by TMHMM2.0 at aa 15-37%2C 44-63%2C 106-128%2C 135-157%2C172-194%2C 201-220%2C 240-258%2C 271-293 and 303-325;gbkey=misc_feature;gene=wbcE;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3350191	3350250	.	-	.	ID=id5465;Note=9 probable transmembrane helices predicted for YE3080 by TMHMM2.0 at aa 15-37%2C 44-63%2C 106-128%2C 135-157%2C172-194%2C 201-220%2C 240-258%2C 271-293 and 303-325;gbkey=misc_feature;gene=wbcE;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3350077	3350133	.	-	.	ID=id5465;Note=9 probable transmembrane helices predicted for YE3080 by TMHMM2.0 at aa 15-37%2C 44-63%2C 106-128%2C 135-157%2C172-194%2C 201-220%2C 240-258%2C 271-293 and 303-325;gbkey=misc_feature;gene=wbcE;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3349972	3350040	.	-	.	ID=id5465;Note=9 probable transmembrane helices predicted for YE3080 by TMHMM2.0 at aa 15-37%2C 44-63%2C 106-128%2C 135-157%2C172-194%2C 201-220%2C 240-258%2C 271-293 and 303-325;gbkey=misc_feature;gene=wbcE;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3349876	3349944	.	-	.	ID=id5465;Note=9 probable transmembrane helices predicted for YE3080 by TMHMM2.0 at aa 15-37%2C 44-63%2C 106-128%2C 135-157%2C172-194%2C 201-220%2C 240-258%2C 271-293 and 303-325;gbkey=misc_feature;gene=wbcE;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	3351033	3352022	.	-	.	ID=gene3032;Name=wbcD;gbkey=Gene;gene=wbcD;gene_biotype=protein_coding;locus_tag=YE3081
AM286415.1	EMBL	CDS	3351033	3352022	.	-	0	ID=cds2946;Parent=gene3032;Dbxref=EnsemblGenomes-Gn:YE3081,EnsemblGenomes-Tr:CAL13116,GOA:A1JN74,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:A1JN74,NCBI_GP:CAL13116.1;Name=CAL13116.1;Note=Previously sequenced as Yersinia enterocolitica putative 6-deoxy-D-Gul transferase WbcD SWALL:Q56866 (EMBL:U46859) (336 aa) fasta scores: E(): 6.9e-127%2C 100 id in 317 aa. Similar to Salmonella typhimurium O antigen biosynthesis abequosyltransferase RfbV SWALL:RFBV_SALTY (SWALL:P26401) (333 aa) fasta scores: E(): 1.7e-07%2C 24.92 id in 337 aa. The N-terminus region of the CDS is extended in comparison to the previously sequenced Y. enterocolitica protein. Possible alternative translational start site. The C-terminus region of the CDS differs from the previously sequenced Y. enterocolitica protein;gbkey=CDS;gene=wbcD;inference=similar to sequence:UniProtKB:P26401;product=putative 6-deoxy-D-Gul transferase;protein_id=CAL13116.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3351498	3351992	.	-	.	ID=id5466;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 98.5%2C E-value 8.7e-27;gbkey=misc_feature;gene=wbcD;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	3352027	3353316	.	-	.	ID=gene3033;Name=wzx;gbkey=Gene;gene=wzx;gene_biotype=protein_coding;gene_synonym=rfbX;locus_tag=YE3082
AM286415.1	EMBL	CDS	3352027	3353316	.	-	0	ID=cds2947;Parent=gene3033;Dbxref=EnsemblGenomes-Gn:YE3082,EnsemblGenomes-Tr:CAL13117,GOA:A1JN75,InterPro:IPR002797,UniProtKB/TrEMBL:A1JN75,NCBI_GP:CAL13117.1;Name=CAL13117.1;Note=Previously sequenced as Yersinia enterocolitica putative O-unit flippase Wzx or RfbX SWALL:Q56865 (EMBL:U46859) (429 aa) fasta scores: E(): 7.1e-156%2C 98.6 id in 429 aa. Weakly similar to Staphylococcus aureus capsular polysaccharide biosynthesis protein CapF SWALL:CAPF_STAAU (SWALL:P39855) (396 aa) fasta scores: E(): 1.7e-08%2C 22.54 38d in 408 aa;gbkey=CDS;gene=wzx;inference=similar to sequence:UniProtKB:P39855;product=CAL13117.1;protein_id=CAL13117.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3353188	3353256	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3353083	3353151	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3352978	3353046	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3352882	3352950	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3352795	3352863	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3352717	3352785	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3352570	3352638	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3352459	3352527	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3352333	3352401	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3352237	3352305	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3352156	3352218	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3352075	3352143	.	-	.	ID=id5467;Note=12 probable transmembrane helices predicted for YE3082 by TMHMM2.0 at aa 21-43%2C 56-78%2C 91-113%2C 123-145%2C152-174%2C 178-200%2C 227-249%2C 264-286%2C 306-328%2C 338-360%2C367-387 and 392-414;gbkey=misc_feature;gene=wzx;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3352456	3353265	.	-	.	ID=id5468;Note=Pfam match to entry PF01943 Polysacc_synt%2CPolysaccharide biosynthesis protein%2C score 234.9%2C E-value 7.5e-68;gbkey=misc_feature;gene=wzx;inference=protein motif:PFAM:PF01943
AM286415.1	EMBL	gene	3353349	3354353	.	-	.	ID=gene3034;Name=wbcC;gbkey=Gene;gene=wbcC;gene_biotype=protein_coding;locus_tag=YE3083
AM286415.1	EMBL	CDS	3353349	3354353	.	-	0	ID=cds2948;Parent=gene3034;Dbxref=EnsemblGenomes-Gn:YE3083,EnsemblGenomes-Tr:CAL13118,GOA:A1JN77,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:A1JN77,NCBI_GP:CAL13118.1;Name=CAL13118.1;Note=Similar to Salmonella typhimurium O antigen biosynthesis abequosyltransferase RfbV SWALL:RFBV_SALTY (SWALL:P26401) (333 aa) fasta scores: E(): 2e-52%2C 44.34 id in 327 aa. C-terminal region is identical to the previously sequenced Yersinia enterocolitica putative glycosyltransferase WbcC SWALL:Q56864 (EMBL:U46859) (283 aa) fasta scores: E(): 6.4e-114%2C 100 38d in 283 aa;gbkey=CDS;gene=wbcC;inference=similar to sequence:UniProtKB:P26401;product=putative glycosyltransferase;protein_id=CAL13118.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3353652	3353693	.	-	.	ID=id5469;Note=PS00761 Signal peptidases I signature 3.;gbkey=misc_feature;gene=wbcC;inference=protein motif:Prosite:PS00761
AM286415.1	EMBL	sequence_feature	3353835	3354335	.	-	.	ID=id5470;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 95.0%2C E-value 9.9e-26;gbkey=misc_feature;gene=wbcC;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	3354419	3355297	.	-	.	ID=gene3035;Name=prt;gbkey=Gene;gene=prt;gene_biotype=protein_coding;gene_synonym=rfbS;locus_tag=YE3084
AM286415.1	EMBL	CDS	3354419	3355297	.	-	0	ID=cds2949;Parent=gene3035;Dbxref=EnsemblGenomes-Gn:YE3084,EnsemblGenomes-Tr:CAL13119,GOA:A1JN98,InterPro:IPR001509,InterPro:IPR016040,UniProtKB/TrEMBL:A1JN98,NCBI_GP:CAL13119.1;Name=CAL13119.1;gbkey=CDS;gene=prt;product=paratose synthase;protein_id=CAL13119.1;transl_table=11
AM286415.1	EMBL	gene	3355330	3355854	.	-	.	ID=gene3036;Name=wbcA;gbkey=Gene;gene=wbcA;gene_biotype=protein_coding;locus_tag=YE3085
AM286415.1	EMBL	CDS	3355330	3355854	.	-	0	ID=cds2950;Parent=gene3036;Dbxref=EnsemblGenomes-Gn:YE3085,EnsemblGenomes-Tr:CAL13120,GOA:A1JNA0,InterPro:IPR000888,InterPro:IPR011051,InterPro:IPR014710,UniProtKB/TrEMBL:A1JNA0,NCBI_GP:CAL13120.1;Name=CAL13120.1;Note=Similar to Shigella flexneri dtdp-4-dehydrorhamnose 3%2C5-epimerase Rfbc or RmlC SWALL:RFBC_SHIFL (SWALL:P37780) (181 aa) fasta scores: E(): 4.6e-22%2C 36.78 38d in 174 aa. Previously sequenced as Yersinia enterocolitica putative 6-deoxy-Gul synthetase-1 WbcA SWALL:Q56862 (EMBL:U46859) (174 aa) fasta scores: E(): 6.6e-73%2C 99.42 38d in 174 aa;gbkey=CDS;gene=wbcA;inference=similar to sequence:UniProtKB:P37780;product=putative epimerase;protein_id=CAL13120.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3355333	3355842	.	-	.	ID=id5471;Note=Pfam match to entry PF00908 dTDP_sugar_isom%2CdTDP-4-dehydrorhamnose 3%2C5-epimerase%2C score 202.4%2CE-value 4.5e-58;gbkey=misc_feature;gene=wbcA;inference=protein motif:PFAM:PF00908
AM286415.1	EMBL	gene	3355978	3357051	.	-	.	ID=gene3037;Name=ddhB;gbkey=Gene;gene=ddhB;gene_biotype=protein_coding;gene_synonym=rfbG;locus_tag=YE3086
AM286415.1	EMBL	CDS	3355978	3357051	.	-	0	ID=cds2951;Parent=gene3037;Dbxref=EnsemblGenomes-Gn:YE3086,EnsemblGenomes-Tr:CAL13121,GOA:A1JNA2,InterPro:IPR001509,InterPro:IPR013445,InterPro:IPR016040,UniProtKB/TrEMBL:A1JNA2,NCBI_GP:CAL13121.1;Name=CAL13121.1;Note=Previously sequenced to Yersinia enterocolitica CDP-glucose 4%2C6-dehydratase DdhB or RfbG SWALL:Q56861 (EMBL:U46859) (358 aa) fasta scores: E(): 6.2e-151%2C 99.16 id in 358 aa. Similar to Salmonella typhimurium CDP-glucose 4%2C6-dehydratase RfbG SWALL:RFBG_SALTY (SWALL:P26397) (359 aa) fasta scores: E(): 9.5e-109%2C69.66 38d in 356 aa.;gbkey=CDS;gene=ddhB;inference=similar to sequence:UniProtKB:P26397;product=CDP-glucose 4%2C6-dehydratase;protein_id=CAL13121.1;transl_table=11
AM286415.1	EMBL	gene	3357057	3357842	.	-	.	ID=gene3038;Name=ddhA;gbkey=Gene;gene=ddhA;gene_biotype=protein_coding;gene_synonym=rfbF;locus_tag=YE3087
AM286415.1	EMBL	CDS	3357057	3357842	.	-	0	ID=cds2952;Parent=gene3038;Dbxref=EnsemblGenomes-Gn:YE3087,EnsemblGenomes-Tr:CAL13122,GOA:A1JNA3,InterPro:IPR005835,InterPro:IPR013446,InterPro:IPR029044,UniProtKB/TrEMBL:A1JNA3,NCBI_GP:CAL13122.1;Name=CAL13122.1;gbkey=CDS;gene=ddhA;product=glucose-1-phosphate cytidylyltransferase;protein_id=CAL13122.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3357084	3357827	.	-	.	ID=id5472;Note=Pfam match to entry PF00483 NTP_transferase%2CNucleotidyl transferase%2C score -21.0%2C E-value 5e-07;gbkey=misc_feature;gene=ddhA;inference=protein motif:PFAM:PF00483
AM286415.1	EMBL	gene	3358610	3359578	.	-	.	ID=gene3039;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;gene_synonym=popA,visA;locus_tag=YE3088
AM286415.1	EMBL	CDS	3358610	3359578	.	-	0	ID=cds2953;Parent=gene3039;Dbxref=EnsemblGenomes-Gn:YE3088,EnsemblGenomes-Tr:CAL13123,GOA:A1JNA4,InterPro:IPR001015,InterPro:IPR019772,NCBI_GP:CAL13123.1;Name=CAL13123.1;gbkey=CDS;gene=hemH;product=ferrochelatase;protein_id=CAL13123.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3358619	3359566	.	-	.	ID=id5473;Note=Pfam match to entry PF00762 Ferrochelatase%2CFerrochelatase%2C score 473.6%2C E-value 1e-139;gbkey=misc_feature;gene=hemH;inference=protein motif:PFAM:PF00762
AM286415.1	EMBL	sequence_feature	3358958	3359014	.	-	.	ID=id5474;Note=PS00534 Ferrochelatase signature.;gbkey=misc_feature;gene=hemH;inference=protein motif:Prosite:PS00534
AM286415.1	EMBL	gene	3359696	3360340	.	-	.	ID=gene3040;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;gene_synonym=dnaW,plsA;locus_tag=YE3089
AM286415.1	EMBL	CDS	3359696	3360340	.	-	0	ID=cds2954;Parent=gene3040;Dbxref=EnsemblGenomes-Gn:YE3089,EnsemblGenomes-Tr:CAL13124,GOA:A1JNB1,InterPro:IPR000850,InterPro:IPR006259,InterPro:IPR007862,InterPro:IPR027417,NCBI_GP:CAL13124.1;Name=CAL13124.1;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=CAL13124.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3359780	3360328	.	-	.	ID=id5475;Note=Pfam match to entry PF00406 adenylatekinase%2CAdenylate kinase%2C score 423.9%2C E-value 9.3e-125;gbkey=misc_feature;gene=adk;inference=protein motif:PFAM:PF00406
AM286415.1	EMBL	sequence_feature	3360065	3360100	.	-	.	ID=id5476;Note=PS00113 Adenylate kinase signature.;gbkey=misc_feature;gene=adk;inference=protein motif:Prosite:PS00113
AM286415.1	EMBL	gene	3360566	3362440	.	-	.	ID=gene3041;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=YE3090
AM286415.1	EMBL	CDS	3360566	3362440	.	-	0	ID=cds2955;Parent=gene3041;Dbxref=EnsemblGenomes-Gn:YE3090,EnsemblGenomes-Tr:CAL13125,GOA:A1JNB3,InterPro:IPR001404,InterPro:IPR003594,InterPro:IPR019805,InterPro:IPR020568,InterPro:IPR020575,NCBI_GP:CAL13125.1;Name=CAL13125.1;gbkey=CDS;gene=htpG;product=heat shock protein HtpG;protein_id=CAL13125.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3360569	3361879	.	-	.	ID=id5477;Note=Pfam match to entry PF00183 HSP90%2C Hsp90 protein %2Cscore 760.5%2C E-value 4.5e-226;gbkey=misc_feature;gene=htpG;inference=protein motif:PFAM:PF00183
AM286415.1	EMBL	sequence_feature	3361886	3362356	.	-	.	ID=id5478;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 67.5%2C E-value 1.9e-17;gbkey=misc_feature;gene=htpG;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	3362333	3362362	.	-	.	ID=id5479;Note=PS00298 Heat shock hsp90 proteins family signature.;gbkey=misc_feature;gene=htpG;inference=protein motif:Prosite:PS00298
AM286415.1	EMBL	gene	3362773	3363378	.	-	.	ID=gene3042;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=YE3091
AM286415.1	EMBL	CDS	3362773	3363378	.	-	0	ID=cds2956;Parent=gene3042;Dbxref=EnsemblGenomes-Gn:YE3091,EnsemblGenomes-Tr:CAL13126,GOA:A1JNB5,InterPro:IPR000093,InterPro:IPR006171,InterPro:IPR015967,InterPro:IPR023627,InterPro:IPR023628,NCBI_GP:CAL13126.1;Name=CAL13126.1;gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=CAL13126.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3362857	3363138	.	-	.	ID=id5480;Note=Pfam match to entry PF01751 Toprim%2C Toprim domain %2Cscore 73.8%2C E-value 2.4e-19;gbkey=misc_feature;gene=recR;inference=protein motif:PFAM:PF01751
AM286415.1	EMBL	sequence_feature	3363142	3363267	.	-	.	ID=id5481;Note=Pfam match to entry PF02132 RecR%2C RecR protein %2Cscore 74.2%2C E-value 1.7e-19;gbkey=misc_feature;gene=recR;inference=protein motif:PFAM:PF02132
AM286415.1	EMBL	sequence_feature	3363148	3363210	.	-	.	ID=id5482;Note=PS01300 RecR protein signature.;gbkey=misc_feature;gene=recR;inference=protein motif:Prosite:PS01300
AM286415.1	EMBL	gene	3363378	3363710	.	-	.	ID=gene3043;Name=YE3092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3092
AM286415.1	EMBL	CDS	3363378	3363710	.	-	0	ID=cds2957;Parent=gene3043;Dbxref=EnsemblGenomes-Gn:YE3092,EnsemblGenomes-Tr:CAL13127,GOA:A1JNB8,InterPro:IPR004401,NCBI_GP:CAL13127.1;Name=CAL13127.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13127.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3363402	3363680	.	-	.	ID=id5483;Note=Pfam match to entry PF02575 DUF149%2C Uncharacterized BCR%2C YbaB family COG0718%2C score 179.4%2C E-value 3.8e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF02575
AM286415.1	EMBL	gene	3363766	3365736	.	-	.	ID=gene3044;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;gene_synonym=dnaZ,dnaZX;locus_tag=YE3093
AM286415.1	EMBL	CDS	3363766	3365736	.	-	0	ID=cds2958;Parent=gene3044;Dbxref=EnsemblGenomes-Gn:YE3093,EnsemblGenomes-Tr:CAL13128,GOA:A1JNC0,InterPro:IPR001270,InterPro:IPR003593,InterPro:IPR008921,InterPro:IPR012763,InterPro:IPR021029,InterPro:IPR022001,InterPro:IPR022754,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNC0,NCBI_GP:CAL13128.1;Name=CAL13128.1;gbkey=CDS;gene=dnaX;product=DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma);protein_id=CAL13128.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3365047	3365619	.	-	.	ID=id5484;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 45.3%2C E-value 8.9e-11;gbkey=misc_feature;gene=dnaX;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	3365581	3365604	.	-	.	ID=id5485;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=dnaX;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3365820	3366383	.	-	.	ID=gene3045;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=YE3094
AM286415.1	EMBL	CDS	3365820	3366383	.	-	0	ID=cds2959;Parent=gene3045;Dbxref=EnsemblGenomes-Gn:YE3094,EnsemblGenomes-Tr:CAL13129,GOA:A1JNC2,InterPro:IPR000836,InterPro:IPR005764,InterPro:IPR029057,NCBI_GP:CAL13129.1;Name=CAL13129.1;gbkey=CDS;gene=apt;product=adenine phosphoribosyltransferase;protein_id=CAL13129.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3365829	3366296	.	-	.	ID=id5486;Note=Pfam match to entry PF00156 Pribosyltran%2CPhosphoribosyl transferase domain%2C score 182.7%2C E-value 3.9e-52;gbkey=misc_feature;gene=apt;inference=protein motif:PFAM:PF00156
AM286415.1	EMBL	sequence_feature	3365970	3366008	.	-	.	ID=id5487;Note=PS00103 Purine/pyrimidine phosphoribosyl transferases signature.;gbkey=misc_feature;gene=apt;inference=protein motif:Prosite:PS00103
AM286415.1	EMBL	gene	3366599	3366979	.	-	.	ID=gene3046;Name=YE3094A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3094A
AM286415.1	EMBL	CDS	3366599	3366979	.	-	0	ID=cds2960;Parent=gene3046;Dbxref=EnsemblGenomes-Gn:YE3094A,EnsemblGenomes-Tr:CAL13130,InterPro:IPR007401,UniProtKB/TrEMBL:A1JNC3,NCBI_GP:CAL13130.1;Name=CAL13130.1;Note=Similar to Yersinia pestis putative membrane protein y1058 SWALL:Q8D149 (EMBL:AE013709) (126 aa) fasta scores: E(): 4.2e-46%2C 89.6 38d in 125 aa%2C Salmonella enterica subsp. enterica serovar Typhi Ty2 putative membrane protein YbaN SWALL:AAO69969 (EMBL:AE016842) (125 aa) fasta scores: E(): 4.9e-35%2C 73.59 38d in 125 aa and to Escherichia coli%2C Escherichia coli O157:H7%2C and Shigella flexneri hypothetical protein yban yban or b0468 or z0585 or ecs0521 or sf0413 SWALL:YBAN_ECOLI (SWALL:P45808) (125 aa) fasta scores: E(): 2.2e-33%2C 70.96 38d in 124 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45808;product=putative membrane protein;protein_id=CAL13130.1;transl_table=11
AM286415.1	EMBL	gene	3367153	3367689	.	+	.	ID=gene3047;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=YE3095
AM286415.1	EMBL	CDS	3367153	3367689	.	+	0	ID=cds2961;Parent=gene3047;Dbxref=EnsemblGenomes-Gn:YE3095,EnsemblGenomes-Tr:CAL13131,InterPro:IPR010890,UniProtKB/TrEMBL:A1JNC5,NCBI_GP:CAL13131.1;Name=CAL13131.1;gbkey=CDS;gene=priC;product=primosomal replication protein n'';protein_id=CAL13131.1;transl_table=11
AM286415.1	EMBL	gene	3367962	3368117	.	+	.	ID=gene3048;Name=YE3096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3096
AM286415.1	EMBL	CDS	3367962	3368117	.	+	0	ID=cds2962;Parent=gene3048;Dbxref=EnsemblGenomes-Gn:YE3096,EnsemblGenomes-Tr:CAL13132,InterPro:IPR019630,UniProtKB/TrEMBL:A1JNC6,NCBI_GP:CAL13132.1;Name=CAL13132.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13132.1;transl_table=11
AM286415.1	EMBL	gene	3368224	3371571	.	-	.	ID=gene3049;Name=kefA;gbkey=Gene;gene=kefA;gene_biotype=protein_coding;gene_synonym=aefA;locus_tag=YE3097
AM286415.1	EMBL	CDS	3368224	3371571	.	-	0	ID=cds2963;Parent=gene3049;Dbxref=EnsemblGenomes-Gn:YE3097,EnsemblGenomes-Tr:CAL13133,GOA:A1JNC7,InterPro:IPR006685,InterPro:IPR010920,InterPro:IPR011014,InterPro:IPR011066,InterPro:IPR024393,InterPro:IPR025692,UniProtKB/TrEMBL:A1JNC7,NCBI_GP:CAL13133.1;Name=CAL13133.1;gbkey=CDS;gene=kefA;product=putative potassium efflux system;protein_id=CAL13133.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3368386	3368991	.	-	.	ID=id5488;Note=Pfam match to entry PF00924 MS_channel%2CMechanosensitive ion channel%2C score 276.2%2C E-value 2.8e-80;gbkey=misc_feature;gene=kefA;inference=protein motif:PFAM:PF00924
AM286415.1	EMBL	sequence_feature	3370087	3370155	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	3369925	3369993	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	3369814	3369882	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	3369706	3369759	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	3369610	3369678	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	3369505	3369573	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	3369403	3369462	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	3369196	3369264	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	3369070	3369138	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	3368941	3369009	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	3368830	3368898	.	-	.	ID=id5489;Note=11 probable transmembrane helices predicted for YE3097 by TMHMM2.0 at aa 473-495%2C 527-549%2C 564-586%2C605-622%2C 632-654%2C 667-689%2C 704-723%2C 770-792%2C 812-834%2C855-877 and 892-914;gbkey=misc_feature;gene=kefA;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	3371864	3372154	.	-	.	ID=gene3050;Name=YE3098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3098
AM286415.1	EMBL	CDS	3371864	3372154	.	-	0	ID=cds2964;Parent=gene3050;Dbxref=EnsemblGenomes-Gn:YE3098,EnsemblGenomes-Tr:CAL13134,InterPro:IPR003787,InterPro:IPR027396,UniProtKB/TrEMBL:A1JNF4,NCBI_GP:CAL13134.1;Name=CAL13134.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13134.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3371867	3372151	.	-	.	ID=id5490;Note=Pfam match to entry PF02635 DrsE%2C DsrE/DsrF-like family%2C score 57.0%2C E-value 2.7e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF02635
AM286415.1	EMBL	gene	3372244	3372900	.	-	.	ID=gene3051;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=YE3099
AM286415.1	EMBL	CDS	3372244	3372900	.	-	0	ID=cds2965;Parent=gene3051;Dbxref=EnsemblGenomes-Gn:YE3099,EnsemblGenomes-Tr:CAL13135,GOA:A1JNF6,InterPro:IPR001647,InterPro:IPR009057,InterPro:IPR011075,InterPro:IPR013572,InterPro:IPR015893,InterPro:IPR023772,UniProtKB/TrEMBL:A1JNF6,NCBI_GP:CAL13135.1;Name=CAL13135.1;gbkey=CDS;gene=acrR;product=putative tetR-family transcriptional regulatory protein;protein_id=CAL13135.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3372715	3372855	.	-	.	ID=id5491;Note=Pfam match to entry PF00440 tetR%2C Bacterial regulatory proteins%2C tetR family%2C score 79.8%2C E-value 3.7e-21;gbkey=misc_feature;gene=acrR;inference=protein motif:PFAM:PF00440
AM286415.1	EMBL	sequence_feature	3372727	3372819	.	-	.	ID=id5492;Note=PS01081 Bacterial regulatory proteins%2C tetR family signature.;gbkey=misc_feature;gene=acrR;inference=protein motif:Prosite:PS01081
AM286415.1	EMBL	gene	3373045	3374232	.	+	.	ID=gene3052;Name=acrA;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;gene_synonym=mtcA;locus_tag=YE3100
AM286415.1	EMBL	CDS	3373045	3374232	.	+	0	ID=cds2966;Parent=gene3052;Dbxref=EnsemblGenomes-Gn:YE3100,EnsemblGenomes-Tr:CAL13136,GOA:A1JNF8,InterPro:IPR006143,UniProtKB/TrEMBL:A1JNF8,NCBI_GP:CAL13136.1;Name=CAL13136.1;gbkey=CDS;gene=acrA;product=multidrug efflux protein;protein_id=CAL13136.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3373087	3373119	.	+	.	ID=id5493;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=acrA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3373237	3374130	.	+	.	ID=id5494;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 276.7%2C E-value 1.9e-80;gbkey=misc_feature;gene=acrA;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	gene	3374249	3377401	.	+	.	ID=gene3053;Name=acrB;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;gene_synonym=acrE;locus_tag=YE3101
AM286415.1	EMBL	CDS	3374249	3377401	.	+	0	ID=cds2967;Parent=gene3053;Dbxref=EnsemblGenomes-Gn:YE3101,EnsemblGenomes-Tr:CAL13137,GOA:A1JNG1,InterPro:IPR001036,InterPro:IPR004764,InterPro:IPR027463,UniProtKB/TrEMBL:A1JNG1,NCBI_GP:CAL13137.1;Name=CAL13137.1;gbkey=CDS;gene=acrB;product=multidrug efflux protein;protein_id=CAL13137.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3374249	3377335	.	+	.	ID=id5495;Note=Pfam match to entry PF00873 ACR_tran%2CAcrB/AcrD/AcrF family%2C score 2009.1%2C E-value 0;gbkey=misc_feature;gene=acrB;inference=protein motif:PFAM:PF00873
AM286415.1	EMBL	sequence_feature	3374276	3374329	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	3375266	3375325	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	3375353	3375421	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	3375566	3375634	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	3375662	3375730	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	3375869	3375937	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	3376862	3376921	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	3376940	3377008	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	3377021	3377089	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	3377168	3377236	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	3377264	3377332	.	+	.	ID=id5496;Note=11 probable transmembrane helices predicted for YE3101 by TMHMM2.0 at aa 10-27%2C 340-359%2C 369-391%2C 440-462%2C472-494%2C 541-563%2C 872-891%2C 898-920%2C 925-947%2C 974-996 and 1006-1028;gbkey=misc_feature;gene=acrB;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	3376730	3376753	.	+	.	ID=id5497;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=acrB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3377642	3378004	.	+	.	ID=gene3054;Name=YE3102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3102
AM286415.1	EMBL	CDS	3377642	3378004	.	+	0	ID=cds2968;Parent=gene3054;Dbxref=EnsemblGenomes-Gn:YE3102,EnsemblGenomes-Tr:CAL13138,GOA:A1JNG3,InterPro:IPR011608,UniProtKB/TrEMBL:A1JNG3,NCBI_GP:CAL13138.1;Name=CAL13138.1;Note=Similar to Escherichia coli hypothetical protein YhfY SWALL:YHFY_ECOLI (SWALL:P45551) (120 aa) fasta scores: E(): 1e-12%2C 43.47 38d in 115 aa%2C and to Pasteurella multocida hypothetical protein PM1058 SWALL:Q9CLZ1 (EMBL:AE006147) (126 aa) fasta scores: E(): 4.9e-08%2C 29.91 38d in 117 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45551;product=conserved hypothetical protein;protein_id=CAL13138.1;transl_table=11
AM286415.1	EMBL	gene	3378070	3379245	.	+	.	ID=gene3055;Name=YE3103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3103
AM286415.1	EMBL	CDS	3378070	3379245	.	+	0	ID=cds2969;Parent=gene3055;Dbxref=EnsemblGenomes-Gn:YE3103,EnsemblGenomes-Tr:CAL13139,InterPro:IPR001608,InterPro:IPR029066,UniProtKB/TrEMBL:A1JNG5,NCBI_GP:CAL13139.1;Name=CAL13139.1;Note=Similar to Escherichia coli hypothetical protein YhfX SWALL:YHFX_ECOLI (SWALL:P45550) (387 aa) fasta scores: E(): 1.5e-86%2C 57.4 38d in 385 aa%2C and to Bacillus halodurans hypothetical protein BH0591 SWALL:Q9KF94 (EMBL:AP001509) (386 aa) fasta scores: E(): 5.8e-46%2C 36.5 id in 389 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45550;product=conserved hypothetical protein;protein_id=CAL13139.1;transl_table=11
AM286415.1	EMBL	gene	3379242	3380507	.	+	.	ID=gene3056;Name=YE3104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3104
AM286415.1	EMBL	CDS	3379242	3380507	.	+	0	ID=cds2970;Parent=gene3056;Dbxref=EnsemblGenomes-Gn:YE3104,EnsemblGenomes-Tr:CAL13140,GOA:A1JNG7,InterPro:IPR006124,InterPro:IPR010045,InterPro:IPR017849,InterPro:IPR017850,UniProtKB/TrEMBL:A1JNG7,NCBI_GP:CAL13140.1;Name=CAL13140.1;Note=Similar to Escherichia coli hypothetical protein YhfW SWALL:YHFW_ECOLI (SWALL:P45549) (408 aa) fasta scores: E(): 2e-81%2C 63.96 38d in 419 aa. Weakly similar to Bacillus subtilis phosphopentomutase Drm SWALL:DEOB_BACSU (SWALL:P46353) (394 aa) fasta scores: E(): 1.7e-09%2C 25.66 id in 413 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P46353;product=metalloenzyme superfamily protein;protein_id=CAL13140.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3380073	3380405	.	+	.	ID=id5498;Note=Pfam match to entry PF01676 Metalloenzyme%2CMetalloenzyme superfamily%2C score 95.9%2C E-value 5.2e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF01676
AM286415.1	EMBL	gene	3380563	3380928	.	+	.	ID=gene3057;Name=YE3105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3105
AM286415.1	EMBL	CDS	3380563	3380928	.	+	0	ID=cds2971;Parent=gene3057;Dbxref=EnsemblGenomes-Gn:YE3105,EnsemblGenomes-Tr:CAL13141,InterPro:IPR021238,UniProtKB/TrEMBL:A1JNG9,NCBI_GP:CAL13141.1;Name=CAL13141.1;Note=Similar to Bacillus halodurans hypothetical protein BH0588 SWALL:Q9KF97 (EMBL:AP001509) (119 aa) fasta scores: E(): 7.3e-16%2C 46.15 38d in 117 aa%2C and to Escherichia coli hypothetical protein YhfU SWALL:YHFU_ECOLI (SWALL:P45547) (130 aa) fasta scores: E(): 7.3e-12%2C 40.7 38d in 113 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45547;product=conserved hypothetical protein;protein_id=CAL13141.1;transl_table=11
AM286415.1	EMBL	gene	3381038	3382321	.	+	.	ID=gene3058;Name=YE3106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3106
AM286415.1	EMBL	CDS	3381038	3382321	.	+	0	ID=cds2972;Parent=gene3058;Dbxref=EnsemblGenomes-Gn:YE3106,EnsemblGenomes-Tr:CAL13142,InterPro:IPR019733,UniProtKB/TrEMBL:A1JNH1,NCBI_GP:CAL13142.1;Name=CAL13142.1;Note=Similar to Bacillus halodurans hypothetical protein BH0589 SWALL:Q9KF96 (EMBL:AP001509) (429 aa) fasta scores: E(): 1.1e-64%2C 42.29 38d in 428 aa%2C and to Escherichia coli hypothetical protein YhfT SWALL:YHFT_ECOLI (SWALL:P45546) (434 aa) fasta scores: E(): 1.1e-25%2C 37.13 38d in 439 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P45546;product=putative membrane protein;protein_id=CAL13142.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3381062	3381130	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	3381188	3381289	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	3381323	3381391	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	3381428	3381496	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	3381515	3381568	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	3381596	3381655	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	3381731	3381799	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	3381857	3381925	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	3381944	3382012	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	3382160	3382219	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	3382238	3382306	.	+	.	ID=id5499;Note=11 probable transmembrane helices predicted for YE3106 by TMHMM2.0 at aa 9-31%2C 51-84%2C 96-118%2C 131-153%2C160-177%2C 187-206%2C 232-254%2C 274-296%2C 303-325%2C 375-394 and 401-423;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	3382624	3382884	.	+	.	ID=gene3059;Name=ykgM;gbkey=Gene;gene=ykgM;gene_biotype=protein_coding;locus_tag=YE3107
AM286415.1	EMBL	CDS	3382624	3382884	.	+	0	ID=cds2973;Parent=gene3059;Dbxref=EnsemblGenomes-Gn:YE3107,EnsemblGenomes-Tr:CAL13143,GOA:A1JNH5,InterPro:IPR002150,InterPro:IPR027493,NCBI_GP:CAL13143.1;Name=CAL13143.1;gbkey=CDS;gene=ykgM;product=putative ribosomal protein;protein_id=CAL13143.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3382624	3382863	.	+	.	ID=id5500;Note=Pfam match to entry PF01197 Ribosomal_L31%2CRibosomal protein L31%2C score 37.6%2C E-value 1.8e-08;gbkey=misc_feature;gene=ykgM;inference=protein motif:PFAM:PF01197
AM286415.1	EMBL	gene	3382900	3383043	.	+	.	ID=gene3060;Name=YE3108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3108
AM286415.1	EMBL	CDS	3382900	3383043	.	+	0	ID=cds2974;Parent=gene3060;Dbxref=EnsemblGenomes-Gn:YE3108,EnsemblGenomes-Tr:CAL13144,GOA:A1JNH6,InterPro:IPR000473,NCBI_GP:CAL13144.1;Name=CAL13144.1;gbkey=CDS;product=putative ribosomal protein L36;protein_id=CAL13144.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3382900	3383022	.	+	.	ID=id5501;Note=Pfam match to entry PF00444 Ribosomal_L36%2CRibosomal protein L36%2C score 28.8%2C E-value 8.3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00444
AM286415.1	EMBL	gene	3383171	3384049	.	-	.	ID=gene3061;Name=YE3109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3109
AM286415.1	EMBL	CDS	3383171	3384049	.	-	0	ID=cds2975;Parent=gene3061;Dbxref=EnsemblGenomes-Gn:YE3109,EnsemblGenomes-Tr:CAL13145,GOA:A1JNH8,InterPro:IPR006127,InterPro:IPR006128,InterPro:IPR006129,UniProtKB/TrEMBL:A1JNH8,NCBI_GP:CAL13145.1;Name=CAL13145.1;Note=Similar to Bacillus subtilis manganese-binding lipoprotein precursor MntA SWALL:MNTA_BACSU (SWALL:O34385) (306 aa) fasta scores: E(): 2.2e-26%2C 31.76 38d in 277 aa%2Cand to Listeria monocytogenes manganese-binding lipoprotein precursor LMO1847 SWALL:MNTA_LISMO (SWALL:Q8Y653) (310 aa) fasta scores: E(): 1.8e-30%2C 35.44 id in 268 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q8Y653;product=periplasmic solute binding protein;protein_id=CAL13145.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3383174	3384028	.	-	.	ID=id5502;Note=Pfam match to entry PF01297 SBP_bac_9%2C Periplasmic solute binding protein family%2C score 283.7%2C E-value 1.5e-82;gbkey=misc_feature;inference=protein motif:PFAM:PF01297
AM286415.1	EMBL	gene	3384095	3384952	.	-	.	ID=gene3062;Name=YE3110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3110
AM286415.1	EMBL	CDS	3384095	3384952	.	-	0	ID=cds2976;Parent=gene3062;Dbxref=EnsemblGenomes-Gn:YE3110,EnsemblGenomes-Tr:CAL13146,GOA:A1JNI0,InterPro:IPR001626,InterPro:IPR029022,UniProtKB/TrEMBL:A1JNI0,NCBI_GP:CAL13146.1;Name=CAL13146.1;Note=Similar to Neisseria meningitidis putative ABC-transporter membrane protein NMA0790 SWALL:Q9JVL3 (EMBL:AL162754) (291 aa) fasta scores: E(): 2.5e-53%2C56.07 38d in 280 aa%2C and to Rhizobium loti ABC transporter%2C permease protein MLL8314 SWALL:Q983I6 (EMBL:AP003013) (291 aa) fasta scores: E(): 3.7e-53%2C58.18 38d in 275 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003013;product=putative ABC-transporter membrane protein;protein_id=CAL13146.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3384824	3384892	.	-	.	ID=id5503;Note=8 probable transmembrane helices predicted for YE3110 by TMHMM2.0 at aa 21-43%2C 58-80%2C 100-122%2C 142-164%2C171-193%2C 197-219%2C 226-248 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3384713	3384781	.	-	.	ID=id5503;Note=8 probable transmembrane helices predicted for YE3110 by TMHMM2.0 at aa 21-43%2C 58-80%2C 100-122%2C 142-164%2C171-193%2C 197-219%2C 226-248 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3384587	3384655	.	-	.	ID=id5503;Note=8 probable transmembrane helices predicted for YE3110 by TMHMM2.0 at aa 21-43%2C 58-80%2C 100-122%2C 142-164%2C171-193%2C 197-219%2C 226-248 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3384461	3384529	.	-	.	ID=id5503;Note=8 probable transmembrane helices predicted for YE3110 by TMHMM2.0 at aa 21-43%2C 58-80%2C 100-122%2C 142-164%2C171-193%2C 197-219%2C 226-248 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3384374	3384442	.	-	.	ID=id5503;Note=8 probable transmembrane helices predicted for YE3110 by TMHMM2.0 at aa 21-43%2C 58-80%2C 100-122%2C 142-164%2C171-193%2C 197-219%2C 226-248 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3384296	3384364	.	-	.	ID=id5503;Note=8 probable transmembrane helices predicted for YE3110 by TMHMM2.0 at aa 21-43%2C 58-80%2C 100-122%2C 142-164%2C171-193%2C 197-219%2C 226-248 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3384209	3384277	.	-	.	ID=id5503;Note=8 probable transmembrane helices predicted for YE3110 by TMHMM2.0 at aa 21-43%2C 58-80%2C 100-122%2C 142-164%2C171-193%2C 197-219%2C 226-248 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3384113	3384181	.	-	.	ID=id5503;Note=8 probable transmembrane helices predicted for YE3110 by TMHMM2.0 at aa 21-43%2C 58-80%2C 100-122%2C 142-164%2C171-193%2C 197-219%2C 226-248 and 258-280;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	3384131	3384916	.	-	.	ID=id5504;Note=Pfam match to entry PF00950 ABC-3%2C ABC 3 transport family%2C score 174.9%2C E-value 8.9e-50;gbkey=misc_feature;inference=protein motif:PFAM:PF00950
AM286415.1	EMBL	gene	3384949	3385677	.	-	.	ID=gene3063;Name=YE3111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3111
AM286415.1	EMBL	CDS	3384949	3385677	.	-	0	ID=cds2977;Parent=gene3063;Dbxref=EnsemblGenomes-Gn:YE3111,EnsemblGenomes-Tr:CAL13147,GOA:A1JNI3,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNI3,NCBI_GP:CAL13147.1;Name=CAL13147.1;Note=Similar to Bacillus subtilis manganese transport system ATP-binding protein MntB SWALL:MNTB_BACSU (SWALL:O34338) (250 aa) fasta scores: E(): 2.6e-18%2C 34.04 id in 235 aa%2C and to Rhizobium loti ABC transporter%2CATP-binding protein MLL8315 SWALL:Q983I5 (EMBL:AP003013) (272 aa) fasta scores: E(): 5.9e-29%2C 44.9 38d in 216 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:O34338;product=ABC transport system ATP-binding protein;protein_id=CAL13147.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3385057	3385548	.	-	.	ID=id5505;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 80.4%2C E-value 2.5e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3385243	3385287	.	-	.	ID=id5506;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	3385683	3385751	.	-	.	ID=id5507;Note=1 probable transmembrane helix predicted for YE3112 by TMHMM2.0 at aa 36-58;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3386447	3386800	.	+	.	ID=gene3064;Name=YE3113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3113
AM286415.1	EMBL	CDS	3386447	3386800	.	+	0	ID=cds2978;Parent=gene3064;Dbxref=EnsemblGenomes-Gn:YE3113,EnsemblGenomes-Tr:CAL13148,UniProtKB/TrEMBL:A1JNI7,NCBI_GP:CAL13148.1;Name=CAL13148.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13148.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3386786	3386797	.	+	.	ID=id5508;Note=PS00014 Endoplasmic reticulum targeting sequence.;gbkey=misc_feature;inference=protein motif:Prosite:PS00014
AM286415.1	EMBL	gene	3386958	3387326	.	+	.	ID=gene3065;Name=YE3114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3114
AM286415.1	EMBL	CDS	3386958	3387326	.	+	0	ID=cds2979;Parent=gene3065;Dbxref=EnsemblGenomes-Gn:YE3114,EnsemblGenomes-Tr:CAL13149,InterPro:IPR019693,UniProtKB/TrEMBL:A1JNI8,NCBI_GP:CAL13149.1;Name=CAL13149.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13149.1;transl_table=11
AM286415.1	EMBL	gene	3387372	3387575	.	+	.	ID=gene3066;Name=ymoA;gbkey=Gene;gene=ymoA;gene_biotype=protein_coding;locus_tag=YE3115
AM286415.1	EMBL	CDS	3387372	3387575	.	+	0	ID=cds2980;Parent=gene3066;Dbxref=EnsemblGenomes-Gn:YE3115,EnsemblGenomes-Tr:CAL13150,InterPro:IPR007985,UniProtKB/TrEMBL:A1JNJ1,NCBI_GP:CAL13150.1;Name=CAL13150.1;gbkey=CDS;gene=ymoA;product=modulating protein YmoA (histone-like protein);protein_id=CAL13150.1;transl_table=11
AM286415.1	EMBL	gene	3388000	3388116	.	-	.	ID=gene3067;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=misc_RNA
AM286415.1	EMBL	transcript	3388006	3388105	.	-	.	ID=rna114;Parent=gene3067;Note=Signal recognition particle (SRP) RNA (RF00169) as predicted by Rfam%2C score 92.61%2C positions 1 to 100;gbkey=misc_RNA;gene=ffs
AM286415.1	EMBL	exon	3388006	3388105	.	-	.	ID=id5509;Parent=rna114;Note=Signal recognition particle (SRP) RNA (RF00169) as predicted by Rfam%2C score 92.61%2C positions 1 to 100;gbkey=misc_RNA;gene=ffs
AM286415.1	EMBL	sequence_feature	3388000	3388116	.	-	.	ID=id5510;Note=Similar to Escherichia coli 4.5S RNA%2C ffs%2C 84 identity in 117 nt overlap;gbkey=misc_feature;gene=ffs
AM286415.1	EMBL	gene	3388337	3388726	.	+	.	ID=gene3068;Name=YE3116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3116
AM286415.1	EMBL	CDS	3388337	3388726	.	+	0	ID=cds2981;Parent=gene3068;Dbxref=EnsemblGenomes-Gn:YE3116,EnsemblGenomes-Tr:CAL13151,GOA:A1JNJ2,InterPro:IPR011991,InterPro:IPR014048,UniProtKB/TrEMBL:A1JNJ2,NCBI_GP:CAL13151.1;Name=CAL13151.1;Note=Similar to the C-terminal region Yersinia pestis putative 6-O-methylguanine DNA methyltransferase family protein YPO3139 SWALL:Q8ZC83 (EMBL:AJ414155) (181 aa) fasta scores: E(): 7.9e-33%2C 68.65 38d in 134 aa. C-terminus is similar to the C-terminal region of Escherichia coli hypothetical protein YbaZ SWALL:YBAZ_ECOLI (SWALL:P75707) (129 aa) fasta scores: E(): 4.6e-28%2C 73.26 38d in 101 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P75707;product=putative 6-O-methylguanine DNA methyltransferase family protein;protein_id=CAL13151.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3388454	3388687	.	+	.	ID=id5511;Note=Pfam match to entry PF01035 Methyltransf_1%2C6-O-methylguanine DNA methyltransferase%2C DNA binding domain%2C score 85.1%2C E-value 9.6e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF01035
AM286415.1	EMBL	gene	3388778	3389308	.	-	.	ID=gene3069;Name=ybaY;gbkey=Gene;gene=ybaY;gene_biotype=protein_coding;locus_tag=YE3117
AM286415.1	EMBL	CDS	3388778	3389308	.	-	0	ID=cds2982;Parent=gene3069;Dbxref=EnsemblGenomes-Gn:YE3117,EnsemblGenomes-Tr:CAL13152,UniProtKB/TrEMBL:A1JNJ3,NCBI_GP:CAL13152.1;Name=CAL13152.1;gbkey=CDS;gene=ybaY;product=putative lipoprotein;protein_id=CAL13152.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3389234	3389266	.	-	.	ID=id5512;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ybaY;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3389566	3390429	.	+	.	ID=gene3070;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=YE3118
AM286415.1	EMBL	CDS	3389566	3390429	.	+	0	ID=cds2983;Parent=gene3070;Dbxref=EnsemblGenomes-Gn:YE3118,EnsemblGenomes-Tr:CAL13153,GOA:A1JNJ6,InterPro:IPR003703,InterPro:IPR025652,InterPro:IPR029069,UniProtKB/TrEMBL:A1JNJ6,NCBI_GP:CAL13153.1;Name=CAL13153.1;gbkey=CDS;gene=tesB;product=acyl-CoA thioesterase II;protein_id=CAL13153.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3389614	3389910	.	+	.	ID=id5513;Note=Pfam match to entry PF02551 Acyl_CoA_thio%2C Acyl-CoA thioesterase%2C score 166.7%2C E-value 2.5e-47;gbkey=misc_feature;gene=tesB;inference=protein motif:PFAM:PF02551
AM286415.1	EMBL	sequence_feature	3390004	3390408	.	+	.	ID=id5514;Note=Pfam match to entry PF02551 Acyl_CoA_thio%2C Acyl-CoA thioesterase%2C score 226.0%2C E-value 3.7e-65;gbkey=misc_feature;gene=tesB;inference=protein motif:PFAM:PF02551
AM286415.1	EMBL	gene	3390729	3392024	.	-	.	ID=gene3071;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=YE3119
AM286415.1	EMBL	CDS	3390729	3392024	.	-	0	ID=cds2984;Parent=gene3071;Dbxref=EnsemblGenomes-Gn:YE3119,EnsemblGenomes-Tr:CAL13154,GOA:A1JNJ8,InterPro:IPR001905,InterPro:IPR002229,InterPro:IPR018047,InterPro:IPR024041,InterPro:IPR029020,UniProtKB/TrEMBL:A1JNJ8,NCBI_GP:CAL13154.1;Name=CAL13154.1;gbkey=CDS;gene=amtB;product=probable ammonium transporter;protein_id=CAL13154.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3390738	3391919	.	-	.	ID=id5515;Note=Pfam match to entry PF00909 Ammonium_transp%2CAmmonium Transporter Family%2C score 616.7%2C E-value 9e-183;gbkey=misc_feature;gene=amtB;inference=protein motif:PFAM:PF00909
AM286415.1	EMBL	sequence_feature	3391938	3392006	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3391842	3391910	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3391740	3391808	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3391590	3391658	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3391503	3391571	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3391401	3391460	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3391305	3391364	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3391209	3391277	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3391122	3391190	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3391044	3391112	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3390939	3391007	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3390828	3390896	.	-	.	ID=id5516;Note=12 probable transmembrane helices predicted for YE3119 by TMHMM2.0 at aa 7-29%2C 39-61%2C 73-95%2C 123-145%2C152-174%2C 189-208%2C 221-240%2C 250-272%2C 279-301%2C 305-327%2C340-362 and 377-399;gbkey=misc_feature;gene=amtB;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3391395	3391472	.	-	.	ID=id5517;Note=PS01219 Ammonium transporters signature.;gbkey=misc_feature;gene=amtB;inference=protein motif:Prosite:PS01219
AM286415.1	EMBL	gene	3392058	3392396	.	-	.	ID=gene3072;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=YE3120
AM286415.1	EMBL	CDS	3392058	3392396	.	-	0	ID=cds2985;Parent=gene3072;Dbxref=EnsemblGenomes-Gn:YE3120,EnsemblGenomes-Tr:CAL13155,GOA:A1JNK1,InterPro:IPR002187,InterPro:IPR002332,InterPro:IPR011322,InterPro:IPR015867,InterPro:IPR017918,UniProtKB/TrEMBL:A1JNK1,NCBI_GP:CAL13155.1;Name=CAL13155.1;gbkey=CDS;gene=glnK;product=nitrogen regulatory protein P-II;protein_id=CAL13155.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3392061	3392396	.	-	.	ID=id5518;Note=Pfam match to entry PF00543 P-II%2C Nitrogen regulatory protein P-II%2C score 185.9%2C E-value 4.1e-53;gbkey=misc_feature;gene=glnK;inference=protein motif:PFAM:PF00543
AM286415.1	EMBL	sequence_feature	3392109	3392150	.	-	.	ID=id5519;Note=PS00638 P-II protein C-terminal region signature.;gbkey=misc_feature;gene=glnK;inference=protein motif:Prosite:PS00638
AM286415.1	EMBL	sequence_feature	3392244	3392261	.	-	.	ID=id5520;Note=PS00496 P-II protein urydylation site.;gbkey=misc_feature;gene=glnK;inference=protein motif:Prosite:PS00496
AM286415.1	EMBL	gene	3392827	3394605	.	-	.	ID=gene3073;Name=mdlB;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;gene_synonym=mdl;locus_tag=YE3121
AM286415.1	EMBL	CDS	3392827	3394605	.	-	0	ID=cds2986;Parent=gene3073;Dbxref=EnsemblGenomes-Gn:YE3121,EnsemblGenomes-Tr:CAL13156,GOA:A1JNK4,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNK4,NCBI_GP:CAL13156.1;Name=CAL13156.1;gbkey=CDS;gene=mdlB;product=probable ATP transporter (ATP-binding protein);protein_id=CAL13156.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3392956	3393507	.	-	.	ID=id5521;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 174.1%2C E-value 1.5e-49;gbkey=misc_feature;gene=mdlB;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3393133	3393177	.	-	.	ID=id5522;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=mdlB;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	3393463	3393486	.	-	.	ID=id5523;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=mdlB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3393712	3394533	.	-	.	ID=id5524;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 116.7%2C E-value 2.9e-32;gbkey=misc_feature;gene=mdlB;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	sequence_feature	3394465	3394533	.	-	.	ID=id5525;Note=5 probable transmembrane helices predicted for YE3121 by TMHMM2.0 at aa 25-47%2C 62-84%2C 138-160%2C 165-185 and 249-271;gbkey=misc_feature;gene=mdlB;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3394354	3394422	.	-	.	ID=id5525;Note=5 probable transmembrane helices predicted for YE3121 by TMHMM2.0 at aa 25-47%2C 62-84%2C 138-160%2C 165-185 and 249-271;gbkey=misc_feature;gene=mdlB;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3394126	3394194	.	-	.	ID=id5525;Note=5 probable transmembrane helices predicted for YE3121 by TMHMM2.0 at aa 25-47%2C 62-84%2C 138-160%2C 165-185 and 249-271;gbkey=misc_feature;gene=mdlB;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3394051	3394113	.	-	.	ID=id5525;Note=5 probable transmembrane helices predicted for YE3121 by TMHMM2.0 at aa 25-47%2C 62-84%2C 138-160%2C 165-185 and 249-271;gbkey=misc_feature;gene=mdlB;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3393793	3393861	.	-	.	ID=id5525;Note=5 probable transmembrane helices predicted for YE3121 by TMHMM2.0 at aa 25-47%2C 62-84%2C 138-160%2C 165-185 and 249-271;gbkey=misc_feature;gene=mdlB;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	3394598	3396364	.	-	.	ID=gene3074;Name=mdlA;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;gene_synonym=mdl;locus_tag=YE3122
AM286415.1	EMBL	CDS	3394598	3396364	.	-	0	ID=cds2987;Parent=gene3074;Dbxref=EnsemblGenomes-Gn:YE3122,EnsemblGenomes-Tr:CAL13157,GOA:A1JNK7,InterPro:IPR001140,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR011527,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNK7,NCBI_GP:CAL13157.1;Name=CAL13157.1;gbkey=CDS;gene=mdlA;product=probable ABC transporter (ATP-binding protein);protein_id=CAL13157.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3394727	3395281	.	-	.	ID=id5526;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 170.5%2C E-value 1.8e-48;gbkey=misc_feature;gene=mdlA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3394904	3394948	.	-	.	ID=id5527;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=mdlA;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	3395237	3395260	.	-	.	ID=id5528;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=mdlA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3396239	3396307	.	-	.	ID=id5529;Note=6 probable transmembrane helices predicted for YE3122 by TMHMM2.0 at aa 20-42%2C 55-77%2C 129-151%2C 156-178%2C246-268 and 278-300;gbkey=misc_feature;gene=mdlA;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3396134	3396202	.	-	.	ID=id5529;Note=6 probable transmembrane helices predicted for YE3122 by TMHMM2.0 at aa 20-42%2C 55-77%2C 129-151%2C 156-178%2C246-268 and 278-300;gbkey=misc_feature;gene=mdlA;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3395912	3395980	.	-	.	ID=id5529;Note=6 probable transmembrane helices predicted for YE3122 by TMHMM2.0 at aa 20-42%2C 55-77%2C 129-151%2C 156-178%2C246-268 and 278-300;gbkey=misc_feature;gene=mdlA;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3395831	3395899	.	-	.	ID=id5529;Note=6 probable transmembrane helices predicted for YE3122 by TMHMM2.0 at aa 20-42%2C 55-77%2C 129-151%2C 156-178%2C246-268 and 278-300;gbkey=misc_feature;gene=mdlA;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3395561	3395629	.	-	.	ID=id5529;Note=6 probable transmembrane helices predicted for YE3122 by TMHMM2.0 at aa 20-42%2C 55-77%2C 129-151%2C 156-178%2C246-268 and 278-300;gbkey=misc_feature;gene=mdlA;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3395465	3395533	.	-	.	ID=id5529;Note=6 probable transmembrane helices predicted for YE3122 by TMHMM2.0 at aa 20-42%2C 55-77%2C 129-151%2C 156-178%2C246-268 and 278-300;gbkey=misc_feature;gene=mdlA;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	3395492	3396313	.	-	.	ID=id5530;Note=Pfam match to entry PF00664 ABC_membrane%2C ABC transporter transmembrane region%2C score 191.7%2C E-value 7.3e-55;gbkey=misc_feature;gene=mdlA;inference=protein motif:PFAM:PF00664
AM286415.1	EMBL	gene	3396639	3397100	.	-	.	ID=gene3075;Name=YE3123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3123
AM286415.1	EMBL	CDS	3396639	3397100	.	-	0	ID=cds2988;Parent=gene3075;Dbxref=EnsemblGenomes-Gn:YE3123,EnsemblGenomes-Tr:CAL13158,GOA:A1JNL0,InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,InterPro:IPR019887,InterPro:IPR019888,UniProtKB/TrEMBL:A1JNL0,NCBI_GP:CAL13158.1;Name=CAL13158.1;gbkey=CDS;product=probable AsnC-family regulatory protein;protein_id=CAL13158.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3396714	3397025	.	-	.	ID=id5531;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 169.0%2C E-value 5.2e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF01037
AM286415.1	EMBL	gene	3397227	3398267	.	+	.	ID=gene3076;Name=YE3124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3124
AM286415.1	EMBL	CDS	3397227	3398267	.	+	0	ID=cds2989;Parent=gene3076;Dbxref=EnsemblGenomes-Gn:YE3124,EnsemblGenomes-Tr:CAL13159,InterPro:IPR001926,UniProtKB/TrEMBL:A1JNL1,NCBI_GP:CAL13159.1;Name=CAL13159.1;gbkey=CDS;product=putative Pyridoxal-phosphate dependent protein;protein_id=CAL13159.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3397272	3398171	.	+	.	ID=id5532;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 179.1%2CE-value 4.7e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	gene	3398394	3399215	.	-	.	ID=gene3077;Name=YE3125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3125
AM286415.1	EMBL	CDS	3398394	3399215	.	-	0	ID=cds2990;Parent=gene3077;Dbxref=EnsemblGenomes-Gn:YE3125,EnsemblGenomes-Tr:CAL13160,GOA:A1JNL2,InterPro:IPR000150,InterPro:IPR006379,InterPro:IPR023214,InterPro:IPR023938,NCBI_GP:CAL13160.1;Name=CAL13160.1;gbkey=CDS;product=putative haloacid dehalogenase-like hydrolase;protein_id=CAL13160.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3398517	3399212	.	-	.	ID=id5533;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 35.8%2C E-value 6.5e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	3398520	3398588	.	-	.	ID=id5534;Note=PS01229 Hypothetical cof family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01229
AM286415.1	EMBL	sequence_feature	3399171	3399206	.	-	.	ID=id5535;Note=PS01228 Hypothetical cof family signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS01228
AM286415.1	EMBL	gene	3399319	3401022	.	+	.	ID=gene3078;Name=YE3126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3126
AM286415.1	EMBL	CDS	3399319	3401022	.	+	0	ID=cds2991;Parent=gene3078;Dbxref=EnsemblGenomes-Gn:YE3126,EnsemblGenomes-Tr:CAL13161,GOA:A1JNM2,InterPro:IPR000914,InterPro:IPR025370,UniProtKB/TrEMBL:A1JNM2,NCBI_GP:CAL13161.1;Name=CAL13161.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13161.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3399547	3401004	.	+	.	ID=id5536;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score -135.9%2C E-value 7.6e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	sequence_feature	3400159	3400188	.	+	.	ID=id5537;Note=PS00142 Neutral zinc metallopeptidases%2Czinc-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00142
AM286415.1	EMBL	gene	3401136	3401834	.	+	.	ID=gene3079;Name=YE3127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3127
AM286415.1	EMBL	CDS	3401136	3401834	.	+	0	ID=cds2992;Parent=gene3079;Dbxref=EnsemblGenomes-Gn:YE3127,EnsemblGenomes-Tr:CAL13162,GOA:A1JNM3,InterPro:IPR014729,InterPro:IPR018317,NCBI_GP:CAL13162.1;Name=CAL13162.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13162.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3401148	3401321	.	+	.	ID=id5538;Note=Pfam match to entry PF00764 Arginosuc_synth%2CArginosuccinate synthase%2C score 17.4%2C E-value 5.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00764
AM286415.1	EMBL	sequence_feature	3401736	3401753	.	+	.	ID=id5539;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	3401921	3402328	.	-	.	ID=gene3080;Name=YE3128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3128
AM286415.1	EMBL	CDS	3401921	3402328	.	-	0	ID=cds2993;Parent=gene3080;Dbxref=EnsemblGenomes-Gn:YE3128,EnsemblGenomes-Tr:CAL13163,GOA:A1JNM4,InterPro:IPR006684,InterPro:IPR029069,UniProtKB/TrEMBL:A1JNM4,NCBI_GP:CAL13163.1;Name=CAL13163.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13163.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3401942	3402286	.	-	.	ID=id5540;Note=Pfam match to entry PF03061 4HBT%2C4-hydroxybenzoyl-CoA thioesterase%2C score 130.9%2C E-value 1.5e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF03061
AM286415.1	EMBL	gene	3402575	3402997	.	-	.	ID=gene3081;Name=YE3129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3129
AM286415.1	EMBL	CDS	3402575	3402997	.	-	0	ID=cds2994;Parent=gene3081;Dbxref=EnsemblGenomes-Gn:YE3129,EnsemblGenomes-Tr:CAL13164,GOA:A1JNM6,InterPro:IPR003583,InterPro:IPR004509,InterPro:IPR010994,UniProtKB/TrEMBL:A1JNM6,NCBI_GP:CAL13164.1;Name=CAL13164.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13164.1;transl_table=11
AM286415.1	EMBL	gene	3403136	3405022	.	-	.	ID=gene3082;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=YE3130
AM286415.1	EMBL	CDS	3403136	3405022	.	-	0	ID=cds2995;Parent=gene3082;Dbxref=EnsemblGenomes-Gn:YE3130,EnsemblGenomes-Tr:CAL13165,GOA:A1JNM7,InterPro:IPR000297,InterPro:IPR027304,UniProtKB/TrEMBL:A1JNM7,NCBI_GP:CAL13165.1;Name=CAL13165.1;gbkey=CDS;gene=ppiD;product=peptidyl-prolyl cis-trans isomerase D;protein_id=CAL13165.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3403952	3404221	.	-	.	ID=id5541;Note=Pfam match to entry PF00639 Rotamase%2C PPIC-type PPIASE domain%2C score 73.6%2C E-value 2.6e-19;gbkey=misc_feature;gene=ppiD;inference=protein motif:PFAM:PF00639
AM286415.1	EMBL	sequence_feature	3404918	3404986	.	-	.	ID=id5542;Note=1 probable transmembrane helix predicted for YE3130 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;gene=ppiD;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3405222	3405494	.	-	.	ID=gene3083;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;gene_synonym=hopD;locus_tag=YE3131
AM286415.1	EMBL	CDS	3405222	3405494	.	-	0	ID=cds2996;Parent=gene3083;Dbxref=EnsemblGenomes-Gn:YE3131,EnsemblGenomes-Tr:CAL13166,GOA:A1JNM8,InterPro:IPR000119,InterPro:IPR010992,InterPro:IPR020816,UniProtKB/TrEMBL:A1JNM8,NCBI_GP:CAL13166.1;Name=CAL13166.1;gbkey=CDS;gene=hupB;product=DNA-binding protein HU-beta;protein_id=CAL13166.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3405225	3405494	.	-	.	ID=id5543;Note=Pfam match to entry PF00216 Bac_DNA_binding%2CBacterial DNA-binding protein%2C score 173.8%2C E-value 1.8e-49;gbkey=misc_feature;gene=hupB;inference=protein motif:PFAM:PF00216
AM286415.1	EMBL	sequence_feature	3405300	3405359	.	-	.	ID=id5544;Note=PS00045 Bacterial histone-like DNA-binding proteins signature.;gbkey=misc_feature;gene=hupB;inference=protein motif:Prosite:PS00045
AM286415.1	EMBL	gene	3405712	3408066	.	-	.	ID=gene3084;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;gene_synonym=capR,deg,lopA,muc;locus_tag=YE3132
AM286415.1	EMBL	CDS	3405712	3408066	.	-	0	ID=cds2997;Parent=gene3084;Dbxref=EnsemblGenomes-Gn:YE3132,EnsemblGenomes-Tr:CAL13167,GOA:A1JNM9,InterPro:IPR003111,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004815,InterPro:IPR008268,InterPro:IPR008269,InterPro:IPR014721,InterPro:IPR015947,InterPro:IPR020568,InterPro:IPR027065,InterPro:IPR027417,InterPro:IPR027543,UniProtKB/TrEMBL:A1JNM9,NCBI_GP:CAL13167.1;Name=CAL13167.1;gbkey=CDS;gene=lon;product=ATP-dependent protease La;protein_id=CAL13167.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3405994	3406026	.	-	.	ID=id5545;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=lon;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3406015	3406041	.	-	.	ID=id5546;Note=PS01046 ATP-dependent serine proteases%2C lon family%2Cserine active site.;gbkey=misc_feature;gene=lon;inference=protein motif:Prosite:PS01046
AM286415.1	EMBL	sequence_feature	3406432	3407016	.	-	.	ID=id5547;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 149.1%2C E-value 5e-42;gbkey=misc_feature;gene=lon;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	3406978	3407001	.	-	.	ID=id5548;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=lon;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3407461	3408039	.	-	.	ID=id5549;Note=Pfam match to entry PF02190 LON%2C ATP-dependent protease La (LON) domain%2C score 251.7%2C E-value 6.7e-73;gbkey=misc_feature;gene=lon;inference=protein motif:PFAM:PF02190
AM286415.1	EMBL	gene	3408261	3409532	.	-	.	ID=gene3085;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;gene_synonym=lopC;locus_tag=YE3133
AM286415.1	EMBL	CDS	3408261	3409532	.	-	0	ID=cds2998;Parent=gene3085;Dbxref=EnsemblGenomes-Gn:YE3133,EnsemblGenomes-Tr:CAL13168,GOA:A1JNN1,InterPro:IPR003593,InterPro:IPR003959,InterPro:IPR004487,InterPro:IPR010603,InterPro:IPR019489,InterPro:IPR027417,NCBI_GP:CAL13168.1;Name=CAL13168.1;gbkey=CDS;gene=clpX;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=CAL13168.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3408414	3409193	.	-	.	ID=id5550;Note=Pfam match to entry PF00004 AAA%2C ATPase family associated with various cellular activities (AAA)%2C score 84.8%2C E-value 1.2e-22;gbkey=misc_feature;gene=clpX;inference=protein motif:PFAM:PF00004
AM286415.1	EMBL	sequence_feature	3408699	3408722	.	-	.	ID=id5551;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=clpX;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3409155	3409178	.	-	.	ID=id5552;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=clpX;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3409738	3410361	.	-	.	ID=gene3086;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;gene_synonym=lopP;locus_tag=YE3134
AM286415.1	EMBL	CDS	3409738	3410361	.	-	0	ID=cds2999;Parent=gene3086;Dbxref=EnsemblGenomes-Gn:YE3134,EnsemblGenomes-Tr:CAL13169,GOA:A1JNN2,InterPro:IPR001907,InterPro:IPR018215,InterPro:IPR023562,InterPro:IPR029045,NCBI_GP:CAL13169.1;Name=CAL13169.1;gbkey=CDS;gene=clpP;product=ATP-dependent Clp protease proteolytic subunit ClpP;protein_id=CAL13169.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3409744	3410289	.	-	.	ID=id5553;Note=Pfam match to entry PF00574 CLP_protease%2C Clp protease%2C score 448.7%2C E-value 3.3e-132;gbkey=misc_feature;gene=clpP;inference=protein motif:PFAM:PF00574
AM286415.1	EMBL	sequence_feature	3409948	3409989	.	-	.	ID=id5554;Note=PS00382 Endopeptidase Clp histidine active site.;gbkey=misc_feature;gene=clpP;inference=protein motif:Prosite:PS00382
AM286415.1	EMBL	sequence_feature	3410020	3410055	.	-	.	ID=id5555;Note=PS00381 Endopeptidase Clp serine active site.;gbkey=misc_feature;gene=clpP;inference=protein motif:Prosite:PS00381
AM286415.1	EMBL	gene	3410818	3412122	.	-	.	ID=gene3087;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=YE3135
AM286415.1	EMBL	CDS	3410818	3412122	.	-	0	ID=cds3000;Parent=gene3087;Dbxref=EnsemblGenomes-Gn:YE3135,EnsemblGenomes-Tr:CAL13170,GOA:A1JNN4,InterPro:IPR001179,InterPro:IPR005215,InterPro:IPR008880,InterPro:IPR008881,InterPro:IPR027304,NCBI_GP:CAL13170.1;Name=CAL13170.1;gbkey=CDS;gene=tig;product=Trigger factor;protein_id=CAL13170.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3411409	3411666	.	-	.	ID=id5556;Note=Pfam match to entry PF00254 FKBP%2C FKBP-type peptidyl-prolyl cis-trans isomerase%2C score 31.5%2C E-value 1.3e-06;gbkey=misc_feature;gene=tig;inference=protein motif:PFAM:PF00254
AM286415.1	EMBL	sequence_feature	3411433	3411456	.	-	.	ID=id5557;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=tig;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3412077	3412352	.	-	.	ID=gene3088;Name=YE3136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3136
AM286415.1	EMBL	CDS	3412077	3412352	.	-	0	ID=cds3001;Parent=gene3088;Dbxref=EnsemblGenomes-Gn:YE3136,EnsemblGenomes-Tr:CAL13171,UniProtKB/TrEMBL:A1JNN5,NCBI_GP:CAL13171.1;Name=CAL13171.1;Note=Poor database matches. N-terminus is similar to an internal region of Yersinia pestis hypothetical protein YPO3159 SWALL:Q8ZC63 (EMBL:AJ414155) (67 aa) fasta scores: E(): 4e-11%2C 94.11 38d in 34 aa. Doubtful CDS;gbkey=CDS;inference=similar to sequence:INSDC:AJ414155;product=hypothetical protein;protein_id=CAL13171.1;transl_table=11
AM286415.1	EMBL	gene	3412538	3412870	.	-	.	ID=gene3089;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=YE3137
AM286415.1	EMBL	CDS	3412538	3412870	.	-	0	ID=cds3002;Parent=gene3089;Dbxref=EnsemblGenomes-Gn:YE3137,EnsemblGenomes-Tr:CAL13172,InterPro:IPR002634,UniProtKB/TrEMBL:A1JNN6,NCBI_GP:CAL13172.1;Name=CAL13172.1;gbkey=CDS;gene=bolA;product=BolA protein;protein_id=CAL13172.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3412613	3412840	.	-	.	ID=id5558;Note=Pfam match to entry PF01722 BolA%2C BolA-like protein%2C score 139.6%2C E-value 3.6e-39;gbkey=misc_feature;gene=bolA;inference=protein motif:PFAM:PF01722
AM286415.1	EMBL	gene	3413221	3413799	.	+	.	ID=gene3090;Name=yajG;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=YE3138
AM286415.1	EMBL	CDS	3413221	3413799	.	+	0	ID=cds3003;Parent=gene3090;Dbxref=EnsemblGenomes-Gn:YE3138,EnsemblGenomes-Tr:CAL13173,InterPro:IPR005619,InterPro:IPR012640,UniProtKB/TrEMBL:A1JNN7,NCBI_GP:CAL13173.1;Name=CAL13173.1;gbkey=CDS;gene=yajG;product=putative lipoprotein;protein_id=CAL13173.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3413221	3413796	.	+	.	ID=id5559;Note=Pfam match to entry PF03923 Lipoprotein_16%2CUncharacterized lipoprotein%2C score 28.9%2C E-value 5.9e-07;gbkey=misc_feature;gene=yajG;inference=protein motif:PFAM:PF03923
AM286415.1	EMBL	sequence_feature	3413242	3413274	.	+	.	ID=id5560;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yajG;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3413877	3415355	.	+	.	ID=gene3091;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=YE3139
AM286415.1	EMBL	CDS	3413877	3415355	.	+	0	ID=cds3004;Parent=gene3091;Dbxref=EnsemblGenomes-Gn:YE3139,EnsemblGenomes-Tr:CAL13174,GOA:A1JNN8,InterPro:IPR004752,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JNN8,NCBI_GP:CAL13174.1;Name=CAL13174.1;gbkey=CDS;gene=ampG;product=Beta-lactamase induction signal transducer AmpG;protein_id=CAL13174.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3413913	3413981	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	3414024	3414083	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	3414120	3414179	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	3414192	3414245	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	3414306	3414374	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	3414402	3414461	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	3414558	3414626	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	3414654	3414722	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	3414735	3414803	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	3414831	3414899	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	3414936	3415004	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	3415014	3415082	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	3415155	3415223	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	3415266	3415334	.	+	.	ID=id5561;Note=14 probable transmembrane helices predicted for YE3139 by TMHMM2.0 at aa 13-35%2C 50-69%2C 82-101%2C 106-123%2C144-166%2C 176-195%2C 228-250%2C 260-282%2C 287-309%2C 319-341%2C354-376%2C 380-402%2C 427-449 and 464-486;gbkey=misc_feature;gene=ampG;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	sequence_feature	3413913	3415118	.	+	.	ID=id5562;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -112.3%2C E-value 0.00067;gbkey=misc_feature;gene=ampG;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	3415620	3416399	.	+	.	ID=gene3092;Name=yfeN;gbkey=Gene;gene=yfeN;gene_biotype=protein_coding;locus_tag=YE3140
AM286415.1	EMBL	CDS	3415620	3416399	.	+	0	ID=cds3005;Parent=gene3092;Dbxref=EnsemblGenomes-Gn:YE3140,EnsemblGenomes-Tr:CAL13175,GOA:A1JNP0,InterPro:IPR018013,UniProtKB/TrEMBL:A1JNP0,NCBI_GP:CAL13175.1;Name=CAL13175.1;gbkey=CDS;gene=yfeN;product=putative exported protein;protein_id=CAL13175.1;transl_table=11
AM286415.1	EMBL	gene	3416762	3417718	.	+	.	ID=gene3093;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=YE3141
AM286415.1	EMBL	CDS	3416762	3417718	.	+	0	ID=cds3006;Parent=gene3093;Dbxref=EnsemblGenomes-Gn:YE3141,EnsemblGenomes-Tr:CAL13176,GOA:A1JNP1,InterPro:IPR002429,InterPro:IPR006333,InterPro:IPR008972,InterPro:IPR010514,InterPro:IPR011759,InterPro:IPR012141,UniProtKB/TrEMBL:A1JNP1,NCBI_GP:CAL13176.1;Name=CAL13176.1;gbkey=CDS;gene=cyoA;product=cytochrome O ubiquinol oxidase subunit II;protein_id=CAL13176.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3416798	3416851	.	+	.	ID=id5563;Note=3 probable transmembrane helices predicted for YE3141 by TMHMM2.0 at aa 13-30%2C 45-67 and 88-108;gbkey=misc_feature;gene=cyoA;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3416894	3416962	.	+	.	ID=id5563;Note=3 probable transmembrane helices predicted for YE3141 by TMHMM2.0 at aa 13-30%2C 45-67 and 88-108;gbkey=misc_feature;gene=cyoA;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3417023	3417085	.	+	.	ID=id5563;Note=3 probable transmembrane helices predicted for YE3141 by TMHMM2.0 at aa 13-30%2C 45-67 and 88-108;gbkey=misc_feature;gene=cyoA;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	3416804	3416836	.	+	.	ID=id5564;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cyoA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3417723	3419714	.	+	.	ID=gene3094;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=YE3142
AM286415.1	EMBL	CDS	3417723	3419714	.	+	0	ID=cds3007;Parent=gene3094;Dbxref=EnsemblGenomes-Gn:YE3142,EnsemblGenomes-Tr:CAL13177,GOA:A1JNP2,InterPro:IPR000883,InterPro:IPR014207,InterPro:IPR023615,InterPro:IPR023616,UniProtKB/TrEMBL:A1JNP2,NCBI_GP:CAL13177.1;Name=CAL13177.1;gbkey=CDS;gene=cyoB;product=cytochrome O ubiquinol oxidase subunit I;protein_id=CAL13177.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3417765	3417833	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	3417891	3417959	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	3418035	3418103	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	3418140	3418208	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	3418293	3418361	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	3418419	3418487	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	3418545	3418613	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	3418650	3418718	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	3418761	3418829	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	3418866	3418934	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	3418962	3419030	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	3419088	3419156	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	3419214	3419282	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	3419490	3419558	.	+	.	ID=id5565;Note=14 probable transmembrane helices predicted for YE3142 by TMHMM2.0 at aa 15-37%2C 57-79%2C 105-127%2C 140-162%2C191-213%2C 233-255%2C 275-297%2C 310-332%2C 347-369%2C 382-404%2C414-436%2C 456-478%2C 498-520 and 590-612;gbkey=misc_feature;gene=cyoB;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	sequence_feature	3417861	3419237	.	+	.	ID=id5566;Note=Pfam match to entry PF00115 COX1%2C Cytochrome C and Quinol oxidase polypeptide I%2C score 880.4%2C E-value 3.7e-262;gbkey=misc_feature;gene=cyoB;inference=protein motif:PFAM:PF00115
AM286415.1	EMBL	sequence_feature	3418560	3418724	.	+	.	ID=id5567;Note=PS00077 Heme-copper oxidase catalytic subunit%2Ccopper B binding region signature.;gbkey=misc_feature;gene=cyoB;inference=protein motif:Prosite:PS00077
AM286415.1	EMBL	sequence_feature	3418986	3419018	.	+	.	ID=id5568;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cyoB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3419211	3419243	.	+	.	ID=id5569;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cyoB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3419704	3420318	.	+	.	ID=gene3095;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=YE3143
AM286415.1	EMBL	CDS	3419704	3420318	.	+	0	ID=cds3008;Parent=gene3095;Dbxref=EnsemblGenomes-Gn:YE3143,EnsemblGenomes-Tr:CAL13178,GOA:A1JNP4,InterPro:IPR000298,InterPro:IPR013833,InterPro:IPR014206,InterPro:IPR024791,UniProtKB/TrEMBL:A1JNP4,NCBI_GP:CAL13178.1;Name=CAL13178.1;gbkey=CDS;gene=cyoC;product=cytochrome O ubiquinol oxidase subunit III;protein_id=CAL13178.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3419704	3420312	.	+	.	ID=id5570;Note=Pfam match to entry PF00510 COX3%2C Cytochrome c oxidase subunit III%2C score -171.2%2C E-value 5.8e-06;gbkey=misc_feature;gene=cyoC;inference=protein motif:PFAM:PF00510
AM286415.1	EMBL	sequence_feature	3419788	3419856	.	+	.	ID=id5571;Note=5 probable transmembrane helices predicted for YE3143 by TMHMM2.0 at aa 29-51%2C 66-88%2C 101-123%2C 138-160 and 181-203;gbkey=misc_feature;gene=cyoC;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3419899	3419967	.	+	.	ID=id5571;Note=5 probable transmembrane helices predicted for YE3143 by TMHMM2.0 at aa 29-51%2C 66-88%2C 101-123%2C 138-160 and 181-203;gbkey=misc_feature;gene=cyoC;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3420004	3420072	.	+	.	ID=id5571;Note=5 probable transmembrane helices predicted for YE3143 by TMHMM2.0 at aa 29-51%2C 66-88%2C 101-123%2C 138-160 and 181-203;gbkey=misc_feature;gene=cyoC;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3420115	3420183	.	+	.	ID=id5571;Note=5 probable transmembrane helices predicted for YE3143 by TMHMM2.0 at aa 29-51%2C 66-88%2C 101-123%2C 138-160 and 181-203;gbkey=misc_feature;gene=cyoC;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3420244	3420312	.	+	.	ID=id5571;Note=5 probable transmembrane helices predicted for YE3143 by TMHMM2.0 at aa 29-51%2C 66-88%2C 101-123%2C 138-160 and 181-203;gbkey=misc_feature;gene=cyoC;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	3420378	3420665	.	+	.	ID=gene3096;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=YE3144
AM286415.1	EMBL	CDS	3420378	3420665	.	+	0	ID=cds3009;Parent=gene3096;Dbxref=EnsemblGenomes-Gn:YE3144,EnsemblGenomes-Tr:CAL13179,GOA:A1JNP5,InterPro:IPR005171,InterPro:IPR014210,UniProtKB/TrEMBL:A1JNP5,NCBI_GP:CAL13179.1;Name=CAL13179.1;gbkey=CDS;gene=cyoD;product=cytochrome O ubiquinol oxidase subunit CyoD;protein_id=CAL13179.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3420378	3420629	.	+	.	ID=id5572;Note=Pfam match to entry PF03626 COX4_pro%2C Prokaryotic Cytochrome C oxidase subunit IV%2C score 159.7%2C E-value 3.2e-45;gbkey=misc_feature;gene=cyoD;inference=protein motif:PFAM:PF03626
AM286415.1	EMBL	sequence_feature	3420390	3420458	.	+	.	ID=id5573;Note=3 probable transmembrane helices predicted for YE3144 by TMHMM2.0 at aa 5-27%2C 32-51 and 64-86;gbkey=misc_feature;gene=cyoD;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3420471	3420530	.	+	.	ID=id5573;Note=3 probable transmembrane helices predicted for YE3144 by TMHMM2.0 at aa 5-27%2C 32-51 and 64-86;gbkey=misc_feature;gene=cyoD;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3420567	3420635	.	+	.	ID=id5573;Note=3 probable transmembrane helices predicted for YE3144 by TMHMM2.0 at aa 5-27%2C 32-51 and 64-86;gbkey=misc_feature;gene=cyoD;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3420676	3421566	.	+	.	ID=gene3097;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=YE3145
AM286415.1	EMBL	CDS	3420676	3421566	.	+	0	ID=cds3010;Parent=gene3097;Dbxref=EnsemblGenomes-Gn:YE3145,EnsemblGenomes-Tr:CAL13180,GOA:A1JNP6,InterPro:IPR000537,InterPro:IPR006369,NCBI_GP:CAL13180.1;Name=CAL13180.1;gbkey=CDS;gene=cyoE;product=protoheme IX farnesyltransferase;protein_id=CAL13180.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3420709	3420777	.	+	.	ID=id5574;Note=9 probable transmembrane helices predicted for YE3145 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 107-126%2C133-155%2C 160-182%2C 209-231%2C 235-252 and 264-286;gbkey=misc_feature;gene=cyoE;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3420787	3420855	.	+	.	ID=id5574;Note=9 probable transmembrane helices predicted for YE3145 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 107-126%2C133-155%2C 160-182%2C 209-231%2C 235-252 and 264-286;gbkey=misc_feature;gene=cyoE;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3420913	3420981	.	+	.	ID=id5574;Note=9 probable transmembrane helices predicted for YE3145 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 107-126%2C133-155%2C 160-182%2C 209-231%2C 235-252 and 264-286;gbkey=misc_feature;gene=cyoE;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3420994	3421053	.	+	.	ID=id5574;Note=9 probable transmembrane helices predicted for YE3145 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 107-126%2C133-155%2C 160-182%2C 209-231%2C 235-252 and 264-286;gbkey=misc_feature;gene=cyoE;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3421072	3421140	.	+	.	ID=id5574;Note=9 probable transmembrane helices predicted for YE3145 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 107-126%2C133-155%2C 160-182%2C 209-231%2C 235-252 and 264-286;gbkey=misc_feature;gene=cyoE;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3421153	3421221	.	+	.	ID=id5574;Note=9 probable transmembrane helices predicted for YE3145 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 107-126%2C133-155%2C 160-182%2C 209-231%2C 235-252 and 264-286;gbkey=misc_feature;gene=cyoE;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3421300	3421368	.	+	.	ID=id5574;Note=9 probable transmembrane helices predicted for YE3145 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 107-126%2C133-155%2C 160-182%2C 209-231%2C 235-252 and 264-286;gbkey=misc_feature;gene=cyoE;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3421378	3421431	.	+	.	ID=id5574;Note=9 probable transmembrane helices predicted for YE3145 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 107-126%2C133-155%2C 160-182%2C 209-231%2C 235-252 and 264-286;gbkey=misc_feature;gene=cyoE;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3421465	3421533	.	+	.	ID=id5574;Note=9 probable transmembrane helices predicted for YE3145 by TMHMM2.0 at aa 12-34%2C 38-60%2C 80-102%2C 107-126%2C133-155%2C 160-182%2C 209-231%2C 235-252 and 264-286;gbkey=misc_feature;gene=cyoE;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	3420718	3421524	.	+	.	ID=id5575;Note=Pfam match to entry PF01040 UbiA%2C UbiA prenyltransferase family%2C score 281.5%2C E-value 7.1e-82;gbkey=misc_feature;gene=cyoE;inference=protein motif:PFAM:PF01040
AM286415.1	EMBL	sequence_feature	3420805	3420837	.	+	.	ID=id5576;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cyoE;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3420844	3420912	.	+	.	ID=id5577;Note=PS00943 UbiA prenyltransferase family signature.;gbkey=misc_feature;gene=cyoE;inference=protein motif:Prosite:PS00943
AM286415.1	EMBL	gene	3421737	3423107	.	+	.	ID=gene3098;Name=yajR;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=YE3146
AM286415.1	EMBL	CDS	3421737	3423107	.	+	0	ID=cds3011;Parent=gene3098;Dbxref=EnsemblGenomes-Gn:YE3146,EnsemblGenomes-Tr:CAL13181,GOA:A1JNP7,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JNP7,NCBI_GP:CAL13181.1;Name=CAL13181.1;gbkey=CDS;gene=yajR;product=putative transporter;protein_id=CAL13181.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3421767	3422927	.	+	.	ID=id5578;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -42.6%2C E-value 2.6e-06;gbkey=misc_feature;gene=yajR;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	3421794	3421862	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3421890	3421958	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3421977	3422036	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3422046	3422114	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3422151	3422219	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3422232	3422300	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3422382	3422450	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3422493	3422561	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3422580	3422639	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3422652	3422720	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3422757	3422825	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3422838	3422906	.	+	.	ID=id5579;Note=12 probable transmembrane helices predicted for YE3146 by TMHMM2.0 at aa 20-42%2C 52-74%2C 81-100%2C 104-126%2C139-161%2C 166-188%2C 216-238%2C 253-275%2C 282-301%2C 306-328%2C341-363 and 368-390;gbkey=misc_feature;gene=yajR;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	3423161	3423652	.	-	.	ID=gene3099;Name=YE3147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3147
AM286415.1	EMBL	CDS	3423161	3423652	.	-	0	ID=cds3012;Parent=gene3099;Dbxref=EnsemblGenomes-Gn:YE3147,EnsemblGenomes-Tr:CAL13182,InterPro:IPR007551,NCBI_GP:CAL13182.1;Name=CAL13182.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13182.1;transl_table=11
AM286415.1	EMBL	gene	3423827	3424108	.	+	.	ID=gene3100;Name=YE3148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3148
AM286415.1	EMBL	CDS	3423827	3424108	.	+	0	ID=cds3013;Parent=gene3100;Dbxref=EnsemblGenomes-Gn:YE3148,EnsemblGenomes-Tr:CAL13183,UniProtKB/TrEMBL:A1JNQ8,NCBI_GP:CAL13183.1;Name=CAL13183.1;Note=Doubtful CDS. N-terminus is similar to the C-terminal region of Escherichia coli hypothetical protein SWALL:P71284 (EMBL:U70214) (103 aa) fasta scores: E(): 0.0002%2C 62.79 38d in 43 aa. Possible gene remnant;gbkey=CDS;inference=similar to sequence:INSDC:U70214;product=hypothetical protein;protein_id=CAL13183.1;transl_table=11
AM286415.1	EMBL	gene	3423990	3424901	.	+	.	ID=gene3101;Name=apbA;gbkey=Gene;gene=apbA;gene_biotype=protein_coding;gene_synonym=panE;locus_tag=YE3149
AM286415.1	EMBL	CDS	3423990	3424901	.	+	0	ID=cds3014;Parent=gene3101;Dbxref=EnsemblGenomes-Gn:YE3149,EnsemblGenomes-Tr:CAL13184,GOA:A1JNQ9,InterPro:IPR003710,InterPro:IPR008927,InterPro:IPR013328,InterPro:IPR013332,InterPro:IPR013752,InterPro:IPR016040,UniProtKB/TrEMBL:A1JNQ9,NCBI_GP:CAL13184.1;Name=CAL13184.1;gbkey=CDS;gene=apbA;product=2-dehydropantoate 2-reductase;protein_id=CAL13184.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3424116	3424859	.	+	.	ID=id5580;Note=Pfam match to entry PF02558 ApbA%2C Ketopantoate reductase PanE/ApbA%2C score 233.1%2C E-value 2.6e-67;gbkey=misc_feature;gene=apbA;inference=protein motif:PFAM:PF02558
AM286415.1	EMBL	gene	3424864	3425460	.	+	.	ID=gene3102;Name=thiJ;gbkey=Gene;gene=thiJ;gene_biotype=protein_coding;locus_tag=YE3150
AM286415.1	EMBL	CDS	3424864	3425460	.	+	0	ID=cds3015;Parent=gene3102;Dbxref=EnsemblGenomes-Gn:YE3150,EnsemblGenomes-Tr:CAL13185,InterPro:IPR002818,InterPro:IPR006287,InterPro:IPR029062,UniProtKB/TrEMBL:A1JNR1,NCBI_GP:CAL13185.1;Name=CAL13185.1;gbkey=CDS;gene=thiJ;product=4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme;protein_id=CAL13185.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3424873	3425382	.	+	.	ID=id5581;Note=Pfam match to entry PF01965 DJ-1_PfpI%2C DJ-1/PfpI family%2C score 167.8%2C E-value 1.2e-47;gbkey=misc_feature;gene=thiJ;inference=protein motif:PFAM:PF01965
AM286415.1	EMBL	gene	3425622	3427073	.	-	.	ID=gene3103;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=YE3151
AM286415.1	EMBL	CDS	3425622	3427073	.	-	0	ID=cds3016;Parent=gene3103;Dbxref=EnsemblGenomes-Gn:YE3151,EnsemblGenomes-Tr:CAL13186,GOA:A1JNR2,InterPro:IPR001763,InterPro:IPR003720,InterPro:IPR004114,InterPro:IPR014729,InterPro:IPR020536,InterPro:IPR026340,NCBI_GP:CAL13186.1;Name=CAL13186.1;gbkey=CDS;gene=thiI;product=thiamine biosynthesis protein;protein_id=CAL13186.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3425964	3426548	.	-	.	ID=id5582;Note=Pfam match to entry PF02568 ThiI%2C Thiamine biosynthesis protein (ThiI)%2C score 363.8%2C E-value 1.1e-106;gbkey=misc_feature;gene=thiI;inference=protein motif:PFAM:PF02568
AM286415.1	EMBL	sequence_feature	3426576	3426848	.	-	.	ID=id5583;Note=Pfam match to entry PF02926 THUMP%2C THUMP domain %2Cscore 91.9%2C E-value 8.1e-25;gbkey=misc_feature;gene=thiI;inference=protein motif:PFAM:PF02926
AM286415.1	EMBL	gene	3427349	3427603	.	+	.	ID=gene3104;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=YE3153
AM286415.1	EMBL	CDS	3427349	3427603	.	+	0	ID=cds3017;Parent=gene3104;Dbxref=EnsemblGenomes-Gn:YE3153,EnsemblGenomes-Tr:CAL13187,GOA:A1JNR4,InterPro:IPR003761,NCBI_GP:CAL13187.1;Name=CAL13187.1;gbkey=CDS;gene=xseB;product=exodeoxyribonuclease VII small subunit;protein_id=CAL13187.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3427385	3427573	.	+	.	ID=id5584;Note=Pfam match to entry PF02609 Exonuc_VII_S%2CExonuclease VII small subunit%2C score 113.1%2C E-value 3.4e-31;gbkey=misc_feature;gene=xseB;inference=protein motif:PFAM:PF02609
AM286415.1	EMBL	gene	3427608	3428528	.	+	.	ID=gene3105;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=YE3154
AM286415.1	EMBL	CDS	3427608	3428528	.	+	0	ID=cds3018;Parent=gene3105;Dbxref=EnsemblGenomes-Gn:YE3154,EnsemblGenomes-Tr:CAL13188,GOA:A1JNR5,InterPro:IPR000092,InterPro:IPR008949,InterPro:IPR017446,UniProtKB/TrEMBL:A1JNR5,NCBI_GP:CAL13188.1;Name=CAL13188.1;gbkey=CDS;gene=ispA;product=geranyltranstransferase;protein_id=CAL13188.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3427722	3428513	.	+	.	ID=id5585;Note=Pfam match to entry PF00348 polyprenyl_synt%2CPolyprenyl synthetase%2C score 408.7%2C E-value 3.5e-120;gbkey=misc_feature;gene=ispA;inference=protein motif:PFAM:PF00348
AM286415.1	EMBL	sequence_feature	3427869	3427919	.	+	.	ID=id5586;Note=PS00723 Polyprenyl synthetases signature 1.;gbkey=misc_feature;gene=ispA;inference=protein motif:Prosite:PS00723
AM286415.1	EMBL	sequence_feature	3428271	3428309	.	+	.	ID=id5587;Note=PS00444 Polyprenyl synthetases signature 2.;gbkey=misc_feature;gene=ispA;inference=protein motif:Prosite:PS00444
AM286415.1	EMBL	gene	3428582	3430441	.	+	.	ID=gene3106;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;gene_synonym=b0420;locus_tag=YE3155
AM286415.1	EMBL	CDS	3428582	3430441	.	+	0	ID=cds3019;Parent=gene3106;Dbxref=EnsemblGenomes-Gn:YE3155,EnsemblGenomes-Tr:CAL13189,GOA:A1JNR7,InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR005477,InterPro:IPR009014,InterPro:IPR020826,InterPro:IPR029061,NCBI_GP:CAL13189.1;Name=CAL13189.1;gbkey=CDS;gene=dxs;product=1-deoxy-D-xylulose 5-phosphate synthase;protein_id=CAL13189.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3429533	3430027	.	+	.	ID=id5588;Note=Pfam match to entry PF02779 transket_pyr%2CTransketolase%2C pyridine binding domain%2C score 208.5%2CE-value 6.6e-60;gbkey=misc_feature;gene=dxs;inference=protein motif:PFAM:PF02779
AM286415.1	EMBL	sequence_feature	3429854	3429904	.	+	.	ID=id5589;Note=PS00802 Transketolase signature 2.;gbkey=misc_feature;gene=dxs;inference=protein motif:Prosite:PS00802
AM286415.1	EMBL	sequence_feature	3430061	3430411	.	+	.	ID=id5590;Note=Pfam match to entry PF02780 transketolase_C%2CTransketolase%2C C-terminal domain%2C score 128.5%2C E-value 7.9e-36;gbkey=misc_feature;gene=dxs;inference=protein motif:PFAM:PF02780
AM286415.1	EMBL	gene	3430443	3430931	.	-	.	ID=gene3107;Name=YE3156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3156
AM286415.1	EMBL	CDS	3430443	3430931	.	-	0	ID=cds3020;Parent=gene3107;Dbxref=EnsemblGenomes-Gn:YE3156,EnsemblGenomes-Tr:CAL13190,UniProtKB/TrEMBL:A1JNR8,NCBI_GP:CAL13190.1;Name=CAL13190.1;Note=Doubtful CDS. N-terminus is similar to the C-terminal region of Yersinia pestis hypothetical protein YPO0143 SWALL:Q8ZJG5 (EMBL:AJ414141) (64 aa) fasta scores: E(): 0.0092%2C 63.63 38d in 33 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414141;product=hypothetical protein;protein_id=CAL13190.1;transl_table=11
AM286415.1	EMBL	gene	3430950	3431447	.	-	.	ID=gene3108;Name=pgpA;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=YE3157
AM286415.1	EMBL	CDS	3430950	3431447	.	-	0	ID=cds3021;Parent=gene3108;Dbxref=EnsemblGenomes-Gn:YE3157,EnsemblGenomes-Tr:CAL13191,GOA:A1JNR9,InterPro:IPR007686,InterPro:IPR026037,UniProtKB/TrEMBL:A1JNR9,NCBI_GP:CAL13191.1;Name=CAL13191.1;gbkey=CDS;gene=pgpA;product=phosphatidylglycerophosphatase A;protein_id=CAL13191.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3431322	3431390	.	-	.	ID=id5591;Note=3 probable transmembrane helices predicted for YE3157 by TMHMM2.0 at aa 20-42%2C 46-68 and 142-161;gbkey=misc_feature;gene=pgpA;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3431244	3431312	.	-	.	ID=id5591;Note=3 probable transmembrane helices predicted for YE3157 by TMHMM2.0 at aa 20-42%2C 46-68 and 142-161;gbkey=misc_feature;gene=pgpA;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3430965	3431024	.	-	.	ID=id5591;Note=3 probable transmembrane helices predicted for YE3157 by TMHMM2.0 at aa 20-42%2C 46-68 and 142-161;gbkey=misc_feature;gene=pgpA;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3431440	3432429	.	-	.	ID=gene3109;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=YE3158
AM286415.1	EMBL	CDS	3431440	3432429	.	-	0	ID=cds3022;Parent=gene3109;Dbxref=EnsemblGenomes-Gn:YE3158,EnsemblGenomes-Tr:CAL13192,GOA:A1JNS0,InterPro:IPR000728,InterPro:IPR006283,InterPro:IPR010918,InterPro:IPR016188,UniProtKB/TrEMBL:A1JNS0,NCBI_GP:CAL13192.1;Name=CAL13192.1;gbkey=CDS;gene=thiL;product=thiamine-monophosphate kinase;protein_id=CAL13192.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3431509	3431982	.	-	.	ID=id5592;Note=Pfam match to entry PF02769 AIRS_C%2C AIR synthase related protein%2C C-terminal domain%2C score 28.6%2C E-value 9.3e-06;gbkey=misc_feature;gene=thiL;inference=protein motif:PFAM:PF02769
AM286415.1	EMBL	sequence_feature	3432061	3432357	.	-	.	ID=id5593;Note=Pfam match to entry PF00586 AIRS%2C AIR synthase related protein%2C N-terminal domain%2C score 23.0%2C E-value 2.8e-06;gbkey=misc_feature;gene=thiL;inference=protein motif:PFAM:PF00586
AM286415.1	EMBL	gene	3432509	3432925	.	-	.	ID=gene3110;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;gene_synonym=ssyB;locus_tag=YE3159
AM286415.1	EMBL	CDS	3432509	3432925	.	-	0	ID=cds3023;Parent=gene3110;Dbxref=EnsemblGenomes-Gn:YE3159,EnsemblGenomes-Tr:CAL13193,GOA:A1JNS2,InterPro:IPR006027,InterPro:IPR011605,NCBI_GP:CAL13193.1;Name=CAL13193.1;gbkey=CDS;gene=nusB;product=N utilization substance protein B;protein_id=CAL13193.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3432524	3432907	.	-	.	ID=id5594;Note=Pfam match to entry PF01029 NusB%2C NusB family %2Cscore 156.4%2C E-value 3.3e-44;gbkey=misc_feature;gene=nusB;inference=protein motif:PFAM:PF01029
AM286415.1	EMBL	gene	3432951	3433421	.	-	.	ID=gene3111;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;gene_synonym=ribE;locus_tag=YE3160
AM286415.1	EMBL	CDS	3432951	3433421	.	-	0	ID=cds3024;Parent=gene3111;Dbxref=EnsemblGenomes-Gn:YE3160,EnsemblGenomes-Tr:CAL13194,GOA:A1JNS3,InterPro:IPR002180,NCBI_GP:CAL13194.1;Name=CAL13194.1;gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=CAL13194.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3432960	3433394	.	-	.	ID=id5595;Note=Pfam match to entry PF00885 DMRL_synthase%2C6%2C7-dimethyl-8-ribityllumazine synthase%2C score 298.3%2CE-value 6.2e-87;gbkey=misc_feature;gene=ribH;inference=protein motif:PFAM:PF00885
AM286415.1	EMBL	gene	3433556	3434665	.	-	.	ID=gene3112;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;gene_synonym=ribG;locus_tag=YE3161
AM286415.1	EMBL	CDS	3433556	3434665	.	-	0	ID=cds3025;Parent=gene3112;Dbxref=EnsemblGenomes-Gn:YE3161,EnsemblGenomes-Tr:CAL13195,GOA:A1JNS4,InterPro:IPR002125,InterPro:IPR002734,InterPro:IPR004794,InterPro:IPR011549,InterPro:IPR016192,InterPro:IPR016193,InterPro:IPR024072,UniProtKB/TrEMBL:A1JNS4,NCBI_GP:CAL13195.1;Name=CAL13195.1;gbkey=CDS;gene=ribD;product=riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase%3B 5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=CAL13195.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3433607	3434221	.	-	.	ID=id5596;Note=Pfam match to entry PF01872 RibD_C%2C RibD C-terminal domain%2C score 306.5%2C E-value 2.1e-89;gbkey=misc_feature;gene=ribD;inference=protein motif:PFAM:PF01872
AM286415.1	EMBL	sequence_feature	3434363	3434665	.	-	.	ID=id5597;Note=Pfam match to entry PF00383 dCMP_cyt_deam%2C Cytidine and deoxycytidylate deaminase zinc-binding region%2C score 158.2%2C E-value 8.9e-45;gbkey=misc_feature;gene=ribD;inference=protein motif:PFAM:PF00383
AM286415.1	EMBL	sequence_feature	3434399	3434515	.	-	.	ID=id5598;Note=PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature.;gbkey=misc_feature;gene=ribD;inference=protein motif:Prosite:PS00903
AM286415.1	EMBL	gene	3434730	3435179	.	-	.	ID=gene3113;Name=YE3162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3162
AM286415.1	EMBL	CDS	3434730	3435179	.	-	0	ID=cds3026;Parent=gene3113;Dbxref=EnsemblGenomes-Gn:YE3162,EnsemblGenomes-Tr:CAL13196,GOA:A1JNS5,InterPro:IPR003796,InterPro:IPR005144,NCBI_GP:CAL13196.1;Name=CAL13196.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13196.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3434763	3435035	.	-	.	ID=id5599;Note=Pfam match to entry PF03477 ATP-cone%2C ATP cone domain%2C score 121.2%2C E-value 1.2e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF03477
AM286415.1	EMBL	gene	3435444	3436412	.	-	.	ID=gene3114;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=YE3163
AM286415.1	EMBL	CDS	3435444	3436412	.	-	0	ID=cds3027;Parent=gene3114;Dbxref=EnsemblGenomes-Gn:YE3163,EnsemblGenomes-Tr:CAL13197,GOA:A1JNS6,InterPro:IPR005665,InterPro:IPR022645,InterPro:IPR022646,InterPro:IPR022813,UniProtKB/TrEMBL:A1JNS6,NCBI_GP:CAL13197.1;Name=CAL13197.1;gbkey=CDS;gene=secF;product=protein-export membrane protein SecF;protein_id=CAL13197.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3435510	3436307	.	-	.	ID=id5600;Note=Pfam match to entry PF02355 SecD_SecF%2C Protein export membrane protein%2C score 449.5%2C E-value 1.8e-132;gbkey=misc_feature;gene=secF;inference=protein motif:PFAM:PF02355
AM286415.1	EMBL	sequence_feature	3436284	3436352	.	-	.	ID=id5601;Note=6 probable transmembrane helices predicted for YE3163 by TMHMM2.0 at aa 21-43%2C 142-161%2C 168-190%2C 194-216%2C247-269 and 274-296;gbkey=misc_feature;gene=secF;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3435930	3435989	.	-	.	ID=id5601;Note=6 probable transmembrane helices predicted for YE3163 by TMHMM2.0 at aa 21-43%2C 142-161%2C 168-190%2C 194-216%2C247-269 and 274-296;gbkey=misc_feature;gene=secF;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3435843	3435911	.	-	.	ID=id5601;Note=6 probable transmembrane helices predicted for YE3163 by TMHMM2.0 at aa 21-43%2C 142-161%2C 168-190%2C 194-216%2C247-269 and 274-296;gbkey=misc_feature;gene=secF;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3435765	3435833	.	-	.	ID=id5601;Note=6 probable transmembrane helices predicted for YE3163 by TMHMM2.0 at aa 21-43%2C 142-161%2C 168-190%2C 194-216%2C247-269 and 274-296;gbkey=misc_feature;gene=secF;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3435606	3435674	.	-	.	ID=id5601;Note=6 probable transmembrane helices predicted for YE3163 by TMHMM2.0 at aa 21-43%2C 142-161%2C 168-190%2C 194-216%2C247-269 and 274-296;gbkey=misc_feature;gene=secF;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3435525	3435593	.	-	.	ID=id5601;Note=6 probable transmembrane helices predicted for YE3163 by TMHMM2.0 at aa 21-43%2C 142-161%2C 168-190%2C 194-216%2C247-269 and 274-296;gbkey=misc_feature;gene=secF;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	3436423	3438270	.	-	.	ID=gene3115;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=YE3164
AM286415.1	EMBL	CDS	3436423	3438270	.	-	0	ID=cds3028;Parent=gene3115;Dbxref=EnsemblGenomes-Gn:YE3164,EnsemblGenomes-Tr:CAL13198,GOA:A1JNS7,InterPro:IPR005791,InterPro:IPR022645,InterPro:IPR022646,InterPro:IPR022813,InterPro:IPR027398,UniProtKB/TrEMBL:A1JNS7,NCBI_GP:CAL13198.1;Name=CAL13198.1;gbkey=CDS;gene=secD;product=protein-export membrane protein SecD;protein_id=CAL13198.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3436450	3437253	.	-	.	ID=id5602;Note=Pfam match to entry PF02355 SecD_SecF%2C Protein export membrane protein%2C score -71.7%2C E-value 2.2e-05;gbkey=misc_feature;gene=secD;inference=protein motif:PFAM:PF02355
AM286415.1	EMBL	sequence_feature	3438184	3438252	.	-	.	ID=id5603;Note=6 probable transmembrane helices predicted for YE3164 by TMHMM2.0 at aa 7-29%2C 450-472%2C 475-497%2C 502-524%2C548-570 and 580-602;gbkey=misc_feature;gene=secD;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3436855	3436923	.	-	.	ID=id5603;Note=6 probable transmembrane helices predicted for YE3164 by TMHMM2.0 at aa 7-29%2C 450-472%2C 475-497%2C 502-524%2C548-570 and 580-602;gbkey=misc_feature;gene=secD;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3436780	3436848	.	-	.	ID=id5603;Note=6 probable transmembrane helices predicted for YE3164 by TMHMM2.0 at aa 7-29%2C 450-472%2C 475-497%2C 502-524%2C548-570 and 580-602;gbkey=misc_feature;gene=secD;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3436699	3436767	.	-	.	ID=id5603;Note=6 probable transmembrane helices predicted for YE3164 by TMHMM2.0 at aa 7-29%2C 450-472%2C 475-497%2C 502-524%2C548-570 and 580-602;gbkey=misc_feature;gene=secD;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3436561	3436629	.	-	.	ID=id5603;Note=6 probable transmembrane helices predicted for YE3164 by TMHMM2.0 at aa 7-29%2C 450-472%2C 475-497%2C 502-524%2C548-570 and 580-602;gbkey=misc_feature;gene=secD;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3436465	3436533	.	-	.	ID=id5603;Note=6 probable transmembrane helices predicted for YE3164 by TMHMM2.0 at aa 7-29%2C 450-472%2C 475-497%2C 502-524%2C548-570 and 580-602;gbkey=misc_feature;gene=secD;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	3437275	3437316	.	-	.	ID=id5604;Note=PS00761 Signal peptidases I signature 3.;gbkey=misc_feature;gene=secD;inference=protein motif:Prosite:PS00761
AM286415.1	EMBL	gene	3438298	3438630	.	-	.	ID=gene3116;Name=YE3165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3165
AM286415.1	EMBL	CDS	3438298	3438630	.	-	0	ID=cds3029;Parent=gene3116;Dbxref=EnsemblGenomes-Gn:YE3165,EnsemblGenomes-Tr:CAL13199,InterPro:IPR003849,UniProtKB/TrEMBL:A1JNS9,NCBI_GP:CAL13199.1;Name=CAL13199.1;Note=Similar to Escherichia coli and Shigella flexneri hypothetical protein YajC SWALL:YAJC_ECOLI (SWALL:P19677) (110 aa) fasta scores: E(): 1.9e-34%2C 87.27 38d in 110 aa%2Cand to Yersinia pestis putative membrane protein YPO3190 SWALL:Q8ZC34 (EMBL:AJ414155) (111 aa) fasta scores: E(): 5.5e-35%2C 90.09 38d in 111 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P19677;product=putative membrane protein;protein_id=CAL13199.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3438325	3438561	.	-	.	ID=id5605;Note=Pfam match to entry PF02699 DUF219%2C Uncharacterized secreted proteins%2C YajC family COG1862%2C score 137.1%2CE-value 2e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF02699
AM286415.1	EMBL	gene	3438743	3439879	.	-	.	ID=gene3117;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=YE3166
AM286415.1	EMBL	CDS	3438743	3439879	.	-	0	ID=cds3030;Parent=gene3117;Dbxref=EnsemblGenomes-Gn:YE3166,EnsemblGenomes-Tr:CAL13200,GOA:A1JNT0,InterPro:IPR002616,InterPro:IPR004803,NCBI_GP:CAL13200.1;Name=CAL13200.1;gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=CAL13200.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3438791	3439507	.	-	.	ID=id5606;Note=Pfam match to entry PF01702 TGT%2C Queuine tRNA-ribosyltransferase%2C score 554.7%2C E-value 3.9e-164;gbkey=misc_feature;gene=tgt;inference=protein motif:PFAM:PF01702
AM286415.1	EMBL	pseudogene	3440192	3440488	.	+	.	ID=gene3118;Name=YE3168;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3168;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	3441780	3442187	.	+	.	ID=gene3118;Name=YE3168;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3168;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	3440192	3440488	.	+	0	ID=cds3031;Parent=gene3118;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa2764 SWALL:Q9I079 (EMBL:AE004704) (231 aa) fasta scores: E(): 1.6e-45%2C 53.68 38d in 231 aa and to Ralstonia solanacearum probable signal peptide protein rsc2328 or rs01220 SWALL:Q8XWZ0 (EMBL:AL646069) (259 aa) fasta scores: E(): 5.8e-33%2C 41.73 38d in 230 aa. This CDS has been disrupted by the insertion of an IS1669 element;gbkey=CDS;inference=similar to sequence:INSDC:AL646069;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3441780	3442187	.	+	0	ID=cds3031;Parent=gene3118;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa2764 SWALL:Q9I079 (EMBL:AE004704) (231 aa) fasta scores: E(): 1.6e-45%2C 53.68 38d in 231 aa and to Ralstonia solanacearum probable signal peptide protein rsc2328 or rs01220 SWALL:Q8XWZ0 (EMBL:AL646069) (259 aa) fasta scores: E(): 5.8e-33%2C 41.73 38d in 230 aa. This CDS has been disrupted by the insertion of an IS1669 element;gbkey=CDS;inference=similar to sequence:INSDC:AL646069;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	repeat_region	3440476	3441778	.	+	.	ID=id5607;Note=Insertion sequence element IS1669;gbkey=repeat_region
AM286415.1	EMBL	gene	3440614	3440928	.	+	.	ID=gene3119;Name=YE3169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3169
AM286415.1	EMBL	CDS	3440614	3440928	.	+	0	ID=cds3032;Parent=gene3119;Dbxref=EnsemblGenomes-Gn:YE3169,EnsemblGenomes-Tr:CAL13202,GOA:A1JIJ8,InterPro:IPR009057,UniProtKB/TrEMBL:A1JIJ8,NCBI_GP:CAL13202.1;Name=CAL13202.1;Note=Similar to Salmonella typhimurium putative cytoplasmic protein STM0948 SWALL:Q8ZQE1 (EMBL:AE008740) (133 aa) fasta scores: E(): 6.6e-25%2C 59.37 38d in 128 aa. Also similar to Yersinia pestis hypothetical protein YPO2009a SWALL:Q8ZEY6 (EMBL:AJ414151) (104 aa) fasta scores: E(): 3.1e-30%2C 87.5 38d in 104 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=IS1669 hypothetical protein;protein_id=CAL13202.1;transl_table=11
AM286415.1	EMBL	gene	3440946	3441743	.	+	.	ID=gene3120;Name=YE3170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3170
AM286415.1	EMBL	CDS	3440946	3441743	.	+	0	ID=cds3033;Parent=gene3120;Dbxref=EnsemblGenomes-Gn:YE3170,EnsemblGenomes-Tr:CAL13203,GOA:A1JIJ9,InterPro:IPR001584,InterPro:IPR012337,UniProtKB/TrEMBL:A1JIJ9,NCBI_GP:CAL13203.1;Name=CAL13203.1;Note=Similar to Shigella sonnei insertion element IS600 hypothetical protein SWALL:YIS2_SHISO (SWALL:P16940) (272 aa) fasta scores: E(): 5.9e-25%2C 37.4 38d in 270 aa%2CPseudomonas aeruginosa hypothetical protein Pa0257 SWALL:Q9I6N2 (EMBL:AE004463) (263 aa) fasta scores: E(): 8.6e-70%2C 66.16 38d in 263 aa and to Porphyromonas gingivalis transposase Orf2 SWALL:Q9L796 (EMBL:AF224744) (312 aa) fasta scores: E(): 9.8e-27%2C 37.26 38d in 271 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P16940;product=putative transposase for insertion element IS1669;protein_id=CAL13203.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3441258	3441734	.	+	.	ID=id5608;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 121.4%2C E-value 1.1e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	3442296	3443384	.	-	.	ID=gene3121;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=YE3172
AM286415.1	EMBL	CDS	3442296	3443384	.	-	0	ID=cds3034;Parent=gene3121;Dbxref=EnsemblGenomes-Gn:YE3172,EnsemblGenomes-Tr:CAL13204,GOA:A1JNT4,InterPro:IPR003699,NCBI_GP:CAL13204.1;Name=CAL13204.1;gbkey=CDS;gene=queA;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=CAL13204.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3442734	3443384	.	-	.	ID=id5609;Note=Pfam match to entry PF02547 Queuosine_synth%2CQueuosine biosynthesis protein%2C score 428.1%2C E-value 5.1e-126;gbkey=misc_feature;gene=queA;inference=protein motif:PFAM:PF02547
AM286415.1	EMBL	gene	3443527	3444108	.	+	.	ID=gene3122;Name=YE3173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3173
AM286415.1	EMBL	CDS	3443527	3444108	.	+	0	ID=cds3035;Parent=gene3122;Dbxref=EnsemblGenomes-Gn:YE3173,EnsemblGenomes-Tr:CAL13205,GOA:A1JNT5,InterPro:IPR007431,InterPro:IPR023491,NCBI_GP:CAL13205.1;Name=CAL13205.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13205.1;transl_table=11
AM286415.1	EMBL	gene	3444333	3444935	.	+	.	ID=gene3123;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=YE3174
AM286415.1	EMBL	CDS	3444333	3444935	.	+	0	ID=cds3036;Parent=gene3123;Dbxref=EnsemblGenomes-Gn:YE3174,EnsemblGenomes-Tr:CAL13206,GOA:A1JNT6,InterPro:IPR000866,InterPro:IPR012336,InterPro:IPR019479,InterPro:IPR024706,UniProtKB/TrEMBL:A1JNT6,NCBI_GP:CAL13206.1;Name=CAL13206.1;gbkey=CDS;gene=ahpC;product=putative alkyl hydroperoxide reductase subunit c;protein_id=CAL13206.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3444342	3444800	.	+	.	ID=id5610;Note=Pfam match to entry PF00578 AhpC-TSA%2C AhpC/TSA family%2C score 201.2%2C E-value 1e-57;gbkey=misc_feature;gene=ahpC;inference=protein motif:PFAM:PF00578
AM286415.1	EMBL	gene	3445681	3447444	.	+	.	ID=gene3124;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=YE3175
AM286415.1	EMBL	CDS	3445681	3447444	.	+	0	ID=cds3037;Parent=gene3124;Dbxref=EnsemblGenomes-Gn:YE3175,EnsemblGenomes-Tr:CAL13207,GOA:A1JNT7,InterPro:IPR000101,InterPro:IPR029055,UniProtKB/TrEMBL:A1JNT7,NCBI_GP:CAL13207.1;Name=CAL13207.1;Note=Similar to Escherichia coli gamma-glutamyltranspeptidase precursor Ggt SWALL:GGT_ECOLI (SWALL:P18956) (580 aa) fasta scores: E(): 9.7e-97%2C 50.09 id in 533 aa%2C and to Pseudomonas sp. gamma-glutamyltranspeptidase precursor Ggt SWALL:GGT_PSESP (SWALL:P36267) (575 aa) fasta scores: E(): 2.5e-118%2C58.03 38d in 591 aa;gbkey=CDS;gene=ggt;inference=similar to sequence:UniProtKB:P36267;product=gamma-glutamyltranspeptidase precursor;protein_id=CAL13207.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3445822	3447429	.	+	.	ID=id5611;Note=Pfam match to entry PF01019 G_glu_transpept%2CGamma-glutamyltranspeptidase%2C score 767.3%2C E-value 4.1e-228;gbkey=misc_feature;gene=ggt;inference=protein motif:PFAM:PF01019
AM286415.1	EMBL	sequence_feature	3446803	3446877	.	+	.	ID=id5612;Note=PS00462 Gamma-glutamyltranspeptidase signature.;gbkey=misc_feature;gene=ggt;inference=protein motif:Prosite:PS00462
AM286415.1	EMBL	gene	3447512	3448192	.	-	.	ID=gene3125;Name=YE3176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3176
AM286415.1	EMBL	CDS	3447512	3448192	.	-	0	ID=cds3038;Parent=gene3125;Dbxref=EnsemblGenomes-Gn:YE3176,EnsemblGenomes-Tr:CAL13208,GOA:A1JNT8,InterPro:IPR002198,InterPro:IPR002347,InterPro:IPR016040,UniProtKB/TrEMBL:A1JNT8,NCBI_GP:CAL13208.1;Name=CAL13208.1;gbkey=CDS;product=probable short-chain dehydrogenase;protein_id=CAL13208.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3447530	3448183	.	-	.	ID=id5613;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 50.5%2C E-value 2.4e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	gene	3448526	3450364	.	-	.	ID=gene3126;Name=malZ;gbkey=Gene;gene=malZ;gene_biotype=protein_coding;locus_tag=YE3177
AM286415.1	EMBL	CDS	3448526	3450364	.	-	0	ID=cds3039;Parent=gene3126;Dbxref=EnsemblGenomes-Gn:YE3177,EnsemblGenomes-Tr:CAL13209,GOA:A1JNT9,InterPro:IPR004185,InterPro:IPR006047,InterPro:IPR006589,InterPro:IPR013780,InterPro:IPR013781,InterPro:IPR015902,InterPro:IPR017069,InterPro:IPR017853,UniProtKB/TrEMBL:A1JNT9,NCBI_GP:CAL13209.1;Name=CAL13209.1;gbkey=CDS;gene=malZ;product=putative maltodextrin glucosidase;protein_id=CAL13209.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3448796	3449977	.	-	.	ID=id5614;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C catalytic domain%2C score 293.6%2C E-value 1.6e-85;gbkey=misc_feature;gene=malZ;inference=protein motif:PFAM:PF00128
AM286415.1	EMBL	gene	3450729	3452120	.	-	.	ID=gene3127;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=YE3178
AM286415.1	EMBL	CDS	3450729	3452120	.	-	0	ID=cds3040;Parent=gene3127;Dbxref=EnsemblGenomes-Gn:YE3178,EnsemblGenomes-Tr:CAL13210,GOA:A1JNU0,InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB/TrEMBL:A1JNU0,NCBI_GP:CAL13210.1;Name=CAL13210.1;gbkey=CDS;gene=proY;product=probable proline-specific permease;protein_id=CAL13210.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3450771	3452096	.	-	.	ID=id5615;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 536.6%2C E-value 1.1e-158;gbkey=misc_feature;gene=proY;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	3451995	3452063	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3451926	3451985	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3451803	3451871	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3451677	3451745	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3451590	3451658	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3451458	3451526	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3451332	3451400	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3451221	3451289	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3451062	3451130	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3450981	3451049	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3450849	3450917	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3450780	3450836	.	-	.	ID=id5616;Note=12 probable transmembrane helices predicted for YE3178 by TMHMM2.0 at aa 20-42%2C 46-65%2C 84-106%2C 126-148%2C155-177%2C 199-221%2C 241-263%2C 278-300%2C 331-353%2C 358-380%2C402-424 and 429-447;gbkey=misc_feature;gene=proY;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3451905	3451997	.	-	.	ID=id5617;Note=PS00218 Amino acid permeases signature.;gbkey=misc_feature;gene=proY;inference=protein motif:Prosite:PS00218
AM286415.1	EMBL	gene	3452196	3453515	.	-	.	ID=gene3128;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=YE3179
AM286415.1	EMBL	CDS	3452196	3453515	.	-	0	ID=cds3041;Parent=gene3128;Dbxref=EnsemblGenomes-Gn:YE3179,EnsemblGenomes-Tr:CAL13211,GOA:A1JNU2,InterPro:IPR004685,UniProtKB/TrEMBL:A1JNU2,NCBI_GP:CAL13211.1;Name=CAL13211.1;gbkey=CDS;gene=brnQ;product=branched-chain amino acid transport system II carrier protein;protein_id=CAL13211.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3453411	3453479	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3453327	3453395	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3453222	3453290	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3453096	3453164	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3453009	3453077	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3452883	3452951	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3452781	3452849	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3452622	3452690	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3452535	3452603	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3452439	3452507	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3452337	3452405	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3452238	3452294	.	-	.	ID=id5618;Note=12 probable transmembrane helices predicted for YE3179 by TMHMM2.0 at aa 13-35%2C 41-63%2C 76-98%2C 118-140%2C147-169%2C 189-211%2C 223-245%2C 276-298%2C 305-327%2C 337-359%2C371-393 and 408-426;gbkey=misc_feature;gene=brnQ;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3452610	3452642	.	-	.	ID=id5619;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=brnQ;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3452643	3452675	.	-	.	ID=id5620;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=brnQ;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	pseudogene	3454117	3454857	.	-	.	ID=gene3129;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3180;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	3453883	3454113	.	-	.	ID=gene3129;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3180;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	3454117	3454857	.	-	0	ID=cds3042;Parent=gene3129;Note=This CDS appears to have suffered a deletion event and carries a premature stop codon;gbkey=CDS;gene=pstS;product=phosphate binding protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3453883	3454113	.	-	0	ID=cds3042;Parent=gene3129;Note=This CDS appears to have suffered a deletion event and carries a premature stop codon;gbkey=CDS;gene=pstS;product=phosphate binding protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	3453910	3454737	.	-	.	ID=id5621;Note=Pfam match to entry PF01449 PstS%2C Phosphate-binding protein%2C score 120.7%2C E-value 1.8e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF01449
AM286415.1	EMBL	gene	3454879	3456195	.	-	.	ID=gene3130;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;gene_synonym=nmpB;locus_tag=YE3181
AM286415.1	EMBL	CDS	3454879	3456195	.	-	0	ID=cds3043;Parent=gene3130;Dbxref=EnsemblGenomes-Gn:YE3181,EnsemblGenomes-Tr:CAL13213,GOA:A1JNU3,InterPro:IPR000014,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR013767,InterPro:IPR014310,InterPro:IPR021766,UniProtKB/TrEMBL:A1JNU3,NCBI_GP:CAL13213.1;Name=CAL13213.1;gbkey=CDS;gene=phoR;product=phosphate regulon sensor protein PhoR;protein_id=CAL13213.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3454924	3455259	.	-	.	ID=id5622;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 142.3%2C E-value 5.6e-40;gbkey=misc_feature;gene=phoR;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	3455389	3455589	.	-	.	ID=id5623;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 85.2%2C E-value 8.4e-23;gbkey=misc_feature;gene=phoR;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	3455710	3455904	.	-	.	ID=id5624;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 44.6%2C E-value 1.4e-10;gbkey=misc_feature;gene=phoR;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	3456067	3456135	.	-	.	ID=id5625;Note=1 probable transmembrane helix predicted for YE3181 by TMHMM2.0 at aa 21-43;gbkey=misc_feature;gene=phoR;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3456220	3456909	.	-	.	ID=gene3131;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=YE3182
AM286415.1	EMBL	CDS	3456220	3456909	.	-	0	ID=cds3044;Parent=gene3131;Dbxref=EnsemblGenomes-Gn:YE3182,EnsemblGenomes-Tr:CAL13214,GOA:A1JNU5,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011879,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JNU5,NCBI_GP:CAL13214.1;Name=CAL13214.1;gbkey=CDS;gene=phoB;product=phosphate regulon transcriptional regulatory protein;protein_id=CAL13214.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3456244	3456459	.	-	.	ID=id5626;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 120.9%2C E-value 1.6e-33;gbkey=misc_feature;gene=phoB;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	sequence_feature	3456538	3456903	.	-	.	ID=id5627;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 136.4%2C E-value 3.3e-38;gbkey=misc_feature;gene=phoB;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	3457179	3458417	.	+	.	ID=gene3132;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=YE3183
AM286415.1	EMBL	CDS	3457179	3458417	.	+	0	ID=cds3045;Parent=gene3132;Dbxref=EnsemblGenomes-Gn:YE3183,EnsemblGenomes-Tr:CAL13215,GOA:A1JNU6,InterPro:IPR004593,InterPro:IPR004843,InterPro:IPR026843,InterPro:IPR029052,UniProtKB/TrEMBL:A1JNU6,NCBI_GP:CAL13215.1;Name=CAL13215.1;gbkey=CDS;gene=sbcD;product=exonuclease SbcD;protein_id=CAL13215.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3457179	3457874	.	+	.	ID=id5628;Note=Pfam match to entry PF00149 Metallophos%2CCalcineurin-like phosphoesterase%2C score 70.8%2C E-value 1.9e-18;gbkey=misc_feature;gene=sbcD;inference=protein motif:PFAM:PF00149
AM286415.1	EMBL	sequence_feature	3457467	3457499	.	+	.	ID=id5629;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=sbcD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3458414	3462103	.	+	.	ID=gene3133;Name=sbcC;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=YE3184
AM286415.1	EMBL	CDS	3458414	3462103	.	+	0	ID=cds3046;Parent=gene3133;Dbxref=EnsemblGenomes-Gn:YE3184,EnsemblGenomes-Tr:CAL13216,GOA:A1JNU7,InterPro:IPR027050,InterPro:IPR027417,UniProtKB/TrEMBL:A1JNU7,NCBI_GP:CAL13216.1;Name=CAL13216.1;gbkey=CDS;gene=sbcC;product=exonuclease;protein_id=CAL13216.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3458522	3458545	.	+	.	ID=id5630;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=sbcC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3459092	3459121	.	+	.	ID=id5631;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 2.5%2C E-value 45;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3459356	3459385	.	+	.	ID=id5632;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 2.2%2C E-value 55;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3459590	3459619	.	+	.	ID=id5633;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 0.5%2C E-value 1.5e+02;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3459815	3459844	.	+	.	ID=id5634;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 1.2%2C E-value 1e+02;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3459899	3459928	.	+	.	ID=id5635;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 0.4%2C E-value 1.6e+02;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3460505	3460534	.	+	.	ID=id5636;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 0.4%2C E-value 1.6e+02;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3460565	3460594	.	+	.	ID=id5637;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 3.0%2C E-value 34;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3460952	3460981	.	+	.	ID=id5638;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 2.1%2C E-value 58;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3460985	3461014	.	+	.	ID=id5639;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 0.4%2C E-value 1.6e+02;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3461054	3461083	.	+	.	ID=id5640;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 3.4%2C E-value 28;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3461108	3461137	.	+	.	ID=id5641;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 0.4%2C E-value 1.5e+02;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	sequence_feature	3461159	3461188	.	+	.	ID=id5642;Note=Pfam match to entry PF00904 Involucrin%2C Involucrin repeat%2C score 1.5%2C E-value 83;gbkey=misc_feature;gene=sbcC;inference=protein motif:PFAM:PF00904
AM286415.1	EMBL	gene	3462393	3463307	.	-	.	ID=gene3134;Name=YE3185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3185
AM286415.1	EMBL	CDS	3462393	3463307	.	-	0	ID=cds3047;Parent=gene3134;Dbxref=EnsemblGenomes-Gn:YE3185,EnsemblGenomes-Tr:CAL13217,InterPro:IPR000600,UniProtKB/TrEMBL:A1JNU9,NCBI_GP:CAL13217.1;Name=CAL13217.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13217.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3462729	3463298	.	-	.	ID=id5643;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 215.0%2C E-value 7.3e-62;gbkey=misc_feature;inference=protein motif:PFAM:PF00480
AM286415.1	EMBL	sequence_feature	3462837	3462920	.	-	.	ID=id5644;Note=PS01125 ROK family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01125
AM286415.1	EMBL	sequence_feature	3462906	3462938	.	-	.	ID=id5645;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3463646	3464557	.	+	.	ID=gene3135;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=YE3186
AM286415.1	EMBL	CDS	3463646	3464557	.	+	0	ID=cds3048;Parent=gene3135;Dbxref=EnsemblGenomes-Gn:YE3186,EnsemblGenomes-Tr:CAL13218,GOA:A1JNV0,InterPro:IPR007476,NCBI_GP:CAL13218.1;Name=CAL13218.1;gbkey=CDS;gene=rdgC;product=recombination associated protein RdgC;protein_id=CAL13218.1;transl_table=11
AM286415.1	EMBL	gene	3464629	3464916	.	-	.	ID=gene3136;Name=YE3187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3187
AM286415.1	EMBL	CDS	3464629	3464916	.	-	0	ID=cds3049;Parent=gene3136;Dbxref=EnsemblGenomes-Gn:YE3187,EnsemblGenomes-Tr:CAL13219,InterPro:IPR009664,InterPro:IPR011051,InterPro:IPR014710,NCBI_GP:CAL13219.1;Name=CAL13219.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13219.1;transl_table=11
AM286415.1	EMBL	gene	3465400	3465924	.	-	.	ID=gene3137;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=YE3188
AM286415.1	EMBL	CDS	3465400	3465924	.	-	0	ID=cds3050;Parent=gene3137;Dbxref=EnsemblGenomes-Gn:YE3188,EnsemblGenomes-Tr:CAL13220,GOA:A1JNV2,InterPro:IPR000623,InterPro:IPR023000,InterPro:IPR027417,InterPro:IPR027544,NCBI_GP:CAL13220.1;Name=CAL13220.1;gbkey=CDS;gene=aroL;product=shikimate kinase II;protein_id=CAL13220.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3465418	3465918	.	-	.	ID=id5646;Note=Pfam match to entry PF01202 SKI%2C Shikimate kinase %2Cscore 239.1%2C E-value 4e-69;gbkey=misc_feature;gene=aroL;inference=protein motif:PFAM:PF01202
AM286415.1	EMBL	sequence_feature	3465679	3465753	.	-	.	ID=id5647;Note=PS01128 Shikimate kinase signature.;gbkey=misc_feature;gene=aroL;inference=protein motif:Prosite:PS01128
AM286415.1	EMBL	sequence_feature	3465877	3465900	.	-	.	ID=id5648;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=aroL;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3466167	3468308	.	-	.	ID=gene3138;Name=YE3189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3189
AM286415.1	EMBL	CDS	3466167	3468308	.	-	0	ID=cds3051;Parent=gene3138;Dbxref=EnsemblGenomes-Gn:YE3189,EnsemblGenomes-Tr:CAL13221,GOA:A1JNV4,InterPro:IPR000531,InterPro:IPR010105,InterPro:IPR012910,UniProtKB/TrEMBL:A1JNV4,NCBI_GP:CAL13221.1;Name=CAL13221.1;gbkey=CDS;product=putative hydroxamate-type ferrisiderophore receptor;protein_id=CAL13221.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3466170	3466508	.	-	.	ID=id5649;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 69.1%2C E-value 5.9e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	gene	3468295	3469413	.	-	.	ID=gene3139;Name=YE3190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3190
AM286415.1	EMBL	CDS	3468295	3469413	.	-	0	ID=cds3052;Parent=gene3139;Dbxref=EnsemblGenomes-Gn:YE3190,EnsemblGenomes-Tr:CAL13222,InterPro:IPR002491,UniProtKB/TrEMBL:A1JNV5,NCBI_GP:CAL13222.1;Name=CAL13222.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13222.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3468466	3469236	.	-	.	ID=id5650;Note=Pfam match to entry PF01497 Peripla_BP_2%2CPeriplasmic binding protein%2C score 37.5%2C E-value 2e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF01497
AM286415.1	EMBL	sequence_feature	3468469	3468498	.	-	.	ID=id5651;Note=PS00019 Actinin-type actin-binding domain signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00019
AM286415.1	EMBL	gene	3469636	3470193	.	-	.	ID=gene3140;Name=YE3191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3191
AM286415.1	EMBL	CDS	3469636	3470193	.	-	0	ID=cds3053;Parent=gene3140;Dbxref=EnsemblGenomes-Gn:YE3191,EnsemblGenomes-Tr:CAL13223,GOA:A1JNV6,InterPro:IPR001737,InterPro:IPR029063,UniProtKB/TrEMBL:A1JNV6,NCBI_GP:CAL13223.1;Name=CAL13223.1;gbkey=CDS;product=putative methyltransferase;protein_id=CAL13223.1;transl_table=11
AM286415.1	EMBL	gene	3470438	3470707	.	-	.	ID=gene3141;Name=YE3192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3192
AM286415.1	EMBL	CDS	3470438	3470707	.	-	0	ID=cds3054;Parent=gene3141;Dbxref=EnsemblGenomes-Gn:YE3192,EnsemblGenomes-Tr:CAL13224,InterPro:IPR010854,InterPro:IPR025543,UniProtKB/TrEMBL:A1JNV7,NCBI_GP:CAL13224.1;Name=CAL13224.1;Note=Similar to Yersinia pestis putative exported protein YPO3518 SWALL:Q8ZBA1 (EMBL:AJ414157) (87 aa) fasta scores: E(): 3.3e-06%2C 35.55 38d in 90 aa%2C and to Salmonella typhimurium%2C and Salmonella typhi putative periplasmic protein STM3362 or STY3543 SWALL:Q8XEN2 (EMBL:AE008855) (88 aa) fasta scores: E(): 5.3e-06%2C 41.75 id in 91 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414157;product=putative exported protein;protein_id=CAL13224.1;transl_table=11
AM286415.1	EMBL	gene	3470920	3471690	.	-	.	ID=gene3142;Name=YE3193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3193
AM286415.1	EMBL	CDS	3470920	3471690	.	-	0	ID=cds3055;Parent=gene3142;Dbxref=EnsemblGenomes-Gn:YE3193,EnsemblGenomes-Tr:CAL13225,GOA:A1JNV8,InterPro:IPR013216,InterPro:IPR029063,UniProtKB/TrEMBL:A1JNV8,NCBI_GP:CAL13225.1;Name=CAL13225.1;Note=Similar to Salmonella typhi putative methyltransferase STY0280 SWALL:Q8Z984 (EMBL:AL627266) (256 aa) fasta scores: E(): 5.8e-60%2C 63.92 38d in 255 aa%2Cand to Salmonella typhimurium putative methyltransferase in menaquinone/biotin biosynthesis STM0259 SWALL:Q8ZRM3 (EMBL:AE008706) (256 aa) fasta scores: E(): 8.9e-60%2C63.52 38d in 255 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627266;product=conserved hypothetical protein;protein_id=CAL13225.1;transl_table=11
AM286415.1	EMBL	gene	3471834	3472328	.	+	.	ID=gene3143;Name=YE3194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3194
AM286415.1	EMBL	CDS	3471834	3472328	.	+	0	ID=cds3056;Parent=gene3143;Dbxref=EnsemblGenomes-Gn:YE3194,EnsemblGenomes-Tr:CAL13226,GOA:A1JNW0,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JNW0,NCBI_GP:CAL13226.1;Name=CAL13226.1;Note=Similar to Listeria monocytogenes hypothetical protein LMO0624 SWALL:Q8Y9A8 (EMBL:AL591976) (147 aa) fasta scores: E(): 6.9e-10%2C 32.46 38d in 154 aa%2C and to Bacillus subtilis YycN protein SWALL:O32293 (EMBL:Z99124) (156 aa) fasta scores: E(): 1.1e-07%2C 31.44 38d in 159 aa;gbkey=CDS;inference=similar to sequence:INSDC:Z99124;product=acetyltransferase (GNAT) family protein;protein_id=CAL13226.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3472038	3472277	.	+	.	ID=id5652;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 53.0%2C E-value 4.2e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	3472473	3472727	.	-	.	ID=gene3144;Name=YE3195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3195
AM286415.1	EMBL	CDS	3472473	3472727	.	-	0	ID=cds3057;Parent=gene3144;Dbxref=EnsemblGenomes-Gn:YE3195,EnsemblGenomes-Tr:CAL13227,UniProtKB/TrEMBL:A1JNW1,NCBI_GP:CAL13227.1;Name=CAL13227.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13227.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3472608	3472667	.	-	.	ID=id5653;Note=2 probable transmembrane helices predicted for YE3195 by TMHMM2.0 at aa 21-40 and 44-61;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3472545	3472598	.	-	.	ID=id5653;Note=2 probable transmembrane helices predicted for YE3195 by TMHMM2.0 at aa 21-40 and 44-61;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	3472856	3481480	.	-	.	ID=gene3145;Name=YE3196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3196
AM286415.1	EMBL	CDS	3472856	3481480	.	-	0	ID=cds3058;Parent=gene3145;Dbxref=EnsemblGenomes-Gn:YE3196,EnsemblGenomes-Tr:CAL13228,GOA:A1JNW2,InterPro:IPR005196,InterPro:IPR008928,InterPro:IPR009342,InterPro:IPR010383,InterPro:IPR010403,InterPro:IPR011013,InterPro:IPR019282,UniProtKB/TrEMBL:A1JNW2,NCBI_GP:CAL13228.1;Name=CAL13228.1;Note=Similar to Brucella abortus cyclic beta 1-2 glucan synthetase Cgs SWALL:O85166 (EMBL:AF047823) (2831 aa) fasta scores: E(): 0%2C 43.84 38d in 2851 aa%2C and to Brucella melitensis cellobiose-phosphorylase BMEI1837 SWALL:Q8YEP1 (EMBL:AE009617) (2867 aa) fasta scores: E(): 0%2C 44.71 38d in 2905 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF047823;product=putative cyclic beta 1-2 glucan synthetase;protein_id=CAL13228.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3480917	3480970	.	-	.	ID=id5654;Note=6 probable transmembrane helices predicted for YE3196 by TMHMM2.0 at aa 171-188%2C 414-436%2C 446-468%2C828-846%2C 851-873 and 958-980;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3480173	3480241	.	-	.	ID=id5654;Note=6 probable transmembrane helices predicted for YE3196 by TMHMM2.0 at aa 171-188%2C 414-436%2C 446-468%2C828-846%2C 851-873 and 958-980;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3480077	3480145	.	-	.	ID=id5654;Note=6 probable transmembrane helices predicted for YE3196 by TMHMM2.0 at aa 171-188%2C 414-436%2C 446-468%2C828-846%2C 851-873 and 958-980;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3478943	3478999	.	-	.	ID=id5654;Note=6 probable transmembrane helices predicted for YE3196 by TMHMM2.0 at aa 171-188%2C 414-436%2C 446-468%2C828-846%2C 851-873 and 958-980;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3478862	3478930	.	-	.	ID=id5654;Note=6 probable transmembrane helices predicted for YE3196 by TMHMM2.0 at aa 171-188%2C 414-436%2C 446-468%2C828-846%2C 851-873 and 958-980;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3478541	3478609	.	-	.	ID=id5654;Note=6 probable transmembrane helices predicted for YE3196 by TMHMM2.0 at aa 171-188%2C 414-436%2C 446-468%2C828-846%2C 851-873 and 958-980;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	3481855	3482604	.	-	.	ID=gene3146;Name=YE3197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3197
AM286415.1	EMBL	CDS	3481855	3482604	.	-	0	ID=cds3059;Parent=gene3146;Dbxref=EnsemblGenomes-Gn:YE3197,EnsemblGenomes-Tr:CAL13229,GOA:A1JNW3,InterPro:IPR009875,InterPro:IPR009926,InterPro:IPR012349,InterPro:IPR023787,UniProtKB/TrEMBL:A1JNW3,NCBI_GP:CAL13229.1;Name=CAL13229.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13229.1;transl_table=11
AM286415.1	EMBL	gene	3482808	3484130	.	-	.	ID=gene3147;Name=aglB;gbkey=Gene;gene=aglB;gene_biotype=protein_coding;locus_tag=YE3198
AM286415.1	EMBL	CDS	3482808	3484130	.	-	0	ID=cds3060;Parent=gene3147;Dbxref=EnsemblGenomes-Gn:YE3198,EnsemblGenomes-Tr:CAL13230,GOA:A1JNW4,InterPro:IPR001088,InterPro:IPR015955,InterPro:IPR016040,InterPro:IPR022616,UniProtKB/TrEMBL:A1JNW4,NCBI_GP:CAL13230.1;Name=CAL13230.1;Note=Similar to Klebsiella pneumoniae 6-phospho-alpha-glucosidase aglB SWALL:AGLB_KLEPN (SWALL:Q9AGA6) (440 aa) fasta scores: E(): 2.6e-121%2C67.73 38d in 437 aa%2C and to Clostridium perfringens maltose-6'-phosphate glucosidase malh or cpe0199 SWALL:Q8XNY3 (EMBL:AP003185) (441 aa) fasta scores: E(): 2.5e-122%2C 68.03 38d in 438 aa;gbkey=CDS;gene=aglB;inference=similar to sequence:UniProtKB:Q9AGA6;product=6-phospho-alpha-glucosidase;protein_id=CAL13230.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3482883	3484118	.	-	.	ID=id5655;Note=Pfam match to entry PF02056 Glyco_hydro_4%2C Family 4 glycosyl hydrolase%2C score 637.2%2C E-value 6e-189;gbkey=misc_feature;gene=aglB;inference=protein motif:PFAM:PF02056
AM286415.1	EMBL	gene	3484142	3485686	.	-	.	ID=gene3148;Name=aglA;gbkey=Gene;gene=aglA;gene_biotype=protein_coding;locus_tag=YE3199
AM286415.1	EMBL	CDS	3484142	3485686	.	-	0	ID=cds3061;Parent=gene3148;Dbxref=EnsemblGenomes-Gn:YE3199,EnsemblGenomes-Tr:CAL13231,GOA:A1JNX4,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR010975,InterPro:IPR013013,InterPro:IPR018113,UniProtKB/TrEMBL:A1JNX4,NCBI_GP:CAL13231.1;Name=CAL13231.1;Note=Similar to Klebsiella pneumoniae PTS system%2Calpha-glucoside-specific IIBC component AglA SWALL:PTAB_KLEPN (SWALL:Q9AGA7) (540 aa) fasta scores: E(): 1.4e-114%2C 55.72 38d in 524 aa%2C and to Fusobacterium mortiferum PTS system%2C alpha-glucoside-specific IIBC component MalB SWALL:PTAB_FUSMR (SWALL:O06900) (526 aa) fasta scores: E(): 5.2e-109%2C 51.52 38d in 524 aa;gbkey=CDS;gene=aglA;inference=similar to sequence:UniProtKB:Q9AGA7;product=PTS system%2C alpha-glucoside-specific IIBC component;protein_id=CAL13231.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3484265	3484369	.	-	.	ID=id5656;Note=Pfam match to entry PF00367 PTS_EIIB%2Cphosphotransferase system%2C EIIB%2C score 62.4%2C E-value 6.4e-16;gbkey=misc_feature;gene=aglA;inference=protein motif:PFAM:PF00367
AM286415.1	EMBL	sequence_feature	3484280	3484333	.	-	.	ID=id5657;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;gene=aglA;inference=protein motif:Prosite:PS01035
AM286415.1	EMBL	sequence_feature	3485582	3485650	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3485471	3485539	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3485369	3485437	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3485243	3485311	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3485120	3485188	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3485039	3485107	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3484934	3485002	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3484808	3484876	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3484730	3484783	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3484664	3484717	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3484592	3484651	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3484481	3484549	.	-	.	ID=id5658;Note=12 probable transmembrane helices predicted for YE3199 by TMHMM2.0 at aa 13-35%2C 50-72%2C 84-106%2C 126-148%2C167-189%2C 194-216%2C 229-251%2C 271-293%2C 302-319%2C 324-341%2C346-365 and 380-402;gbkey=misc_feature;gene=aglA;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3484661	3485662	.	-	.	ID=id5659;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 293.9%2C E-value 1.3e-85;gbkey=misc_feature;gene=aglA;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	gene	3485925	3486635	.	+	.	ID=gene3149;Name=YE3200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3200
AM286415.1	EMBL	CDS	3485925	3486635	.	+	0	ID=cds3062;Parent=gene3149;Dbxref=EnsemblGenomes-Gn:YE3200,EnsemblGenomes-Tr:CAL13232,GOA:A1JNX5,InterPro:IPR000524,InterPro:IPR011663,InterPro:IPR011991,InterPro:IPR028978,UniProtKB/TrEMBL:A1JNX5,NCBI_GP:CAL13232.1;Name=CAL13232.1;Note=Similar to Escherichia coli fatty acyl responsive regulator FarR SWALL:FARR_ECOLI (SWALL:P13669) (240 aa) fasta scores: E(): 7.7e-23%2C 32.62 38d in 236 aa%2C and to Escherichia coli hypothetical transcriptional regulator YidP SWALL:YIDP_ECOLI (SWALL:P31453) (238 aa) fasta scores: E(): 9.8e-30%2C 37.02 38d in 235 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P31453;product=GntR family transcription regulatory protein;protein_id=CAL13232.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3485985	3486119	.	+	.	ID=id5660;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 48.8%2C E-value 7.7e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	gene	3486704	3487963	.	-	.	ID=gene3150;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=YE3201
AM286415.1	EMBL	CDS	3486704	3487963	.	-	0	ID=cds3063;Parent=gene3150;Dbxref=EnsemblGenomes-Gn:YE3201,EnsemblGenomes-Tr:CAL13233,GOA:A1JNX6,InterPro:IPR000965,InterPro:IPR012134,InterPro:IPR015590,InterPro:IPR016161,InterPro:IPR016162,InterPro:IPR016163,InterPro:IPR020593,NCBI_GP:CAL13233.1;Name=CAL13233.1;gbkey=CDS;gene=proA;product=gamma-glutamyl phosphate reductase;protein_id=CAL13233.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3486722	3487933	.	-	.	ID=id5661;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score -211.7%2C E-value 4.2e-06;gbkey=misc_feature;gene=proA;inference=protein motif:PFAM:PF00171
AM286415.1	EMBL	sequence_feature	3486926	3486991	.	-	.	ID=id5662;Note=PS01223 Gamma-glutamyl phosphate reductase signature.;gbkey=misc_feature;gene=proA;inference=protein motif:Prosite:PS01223
AM286415.1	EMBL	gene	3487973	3489076	.	-	.	ID=gene3151;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=YE3202
AM286415.1	EMBL	CDS	3487973	3489076	.	-	0	ID=cds3064;Parent=gene3151;Dbxref=EnsemblGenomes-Gn:YE3202,EnsemblGenomes-Tr:CAL13234,GOA:A1JNX7,InterPro:IPR001048,InterPro:IPR001057,InterPro:IPR002478,InterPro:IPR005715,InterPro:IPR011529,InterPro:IPR015947,InterPro:IPR019797,NCBI_GP:CAL13234.1;Name=CAL13234.1;gbkey=CDS;gene=proB;product=glutamate 5-kinase;protein_id=CAL13234.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3488027	3488251	.	-	.	ID=id5663;Note=Pfam match to entry PF01472 PUA%2C PUA domain%2C score 78.6%2C E-value 8.6e-21;gbkey=misc_feature;gene=proB;inference=protein motif:PFAM:PF01472
AM286415.1	EMBL	sequence_feature	3488372	3489064	.	-	.	ID=id5664;Note=Pfam match to entry PF00696 aakinase%2C Amino acid kinase family%2C score 202.2%2C E-value 5.1e-58;gbkey=misc_feature;gene=proB;inference=protein motif:PFAM:PF00696
AM286415.1	EMBL	sequence_feature	3488393	3488458	.	-	.	ID=id5665;Note=PS00902 Glutamate 5-kinase signature.;gbkey=misc_feature;gene=proB;inference=protein motif:Prosite:PS00902
AM286415.1	EMBL	gene	3489232	3489633	.	-	.	ID=gene3152;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=YE3203
AM286415.1	EMBL	CDS	3489232	3489633	.	-	0	ID=cds3065;Parent=gene3152;Dbxref=EnsemblGenomes-Gn:YE3203,EnsemblGenomes-Tr:CAL13235,GOA:A1JNX8,InterPro:IPR009986,NCBI_GP:CAL13235.1;Name=CAL13235.1;gbkey=CDS;gene=crl;product=curlin genes regulatory protein;protein_id=CAL13235.1;transl_table=11
AM286415.1	EMBL	gene	3489693	3490940	.	-	.	ID=gene3153;Name=YE3204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3204
AM286415.1	EMBL	CDS	3489693	3490940	.	-	0	ID=cds3066;Parent=gene3153;Dbxref=EnsemblGenomes-Gn:YE3204,EnsemblGenomes-Tr:CAL13236,InterPro:IPR010520,InterPro:IPR029058,NCBI_GP:CAL13236.1;Name=CAL13236.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13236.1;transl_table=11
AM286415.1	EMBL	gene	3491191	3491649	.	-	.	ID=gene3154;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;gene_synonym=gpp,gxu;locus_tag=YE3205
AM286415.1	EMBL	CDS	3491191	3491649	.	-	0	ID=cds3067;Parent=gene3154;Dbxref=EnsemblGenomes-Gn:YE3205,EnsemblGenomes-Tr:CAL13237,GOA:A1JNY0,InterPro:IPR000836,InterPro:IPR023747,InterPro:IPR029057,NCBI_GP:CAL13237.1;Name=CAL13237.1;gbkey=CDS;gene=gpt;product=xanthine-guanine phosphoribosyltransferase;protein_id=CAL13237.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3491242	3491643	.	-	.	ID=id5666;Note=Pfam match to entry PF00156 Pribosyltran%2CPhosphoribosyl transferase domain%2C score 41.7%2C E-value 1.1e-09;gbkey=misc_feature;gene=gpt;inference=protein motif:PFAM:PF00156
AM286415.1	EMBL	sequence_feature	3491362	3491400	.	-	.	ID=id5667;Note=PS00103 Purine/pyrimidine phosphoribosyl transferases signature.;gbkey=misc_feature;gene=gpt;inference=protein motif:Prosite:PS00103
AM286415.1	EMBL	gene	3491957	3493417	.	+	.	ID=gene3155;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;gene_synonym=pepH;locus_tag=YE3206
AM286415.1	EMBL	CDS	3491957	3493417	.	+	0	ID=cds3068;Parent=gene3155;Dbxref=EnsemblGenomes-Gn:YE3206,EnsemblGenomes-Tr:CAL13238,GOA:A1JNY2,InterPro:IPR001160,InterPro:IPR002933,InterPro:IPR011650,UniProtKB/TrEMBL:A1JNY2,NCBI_GP:CAL13238.1;Name=CAL13238.1;gbkey=CDS;gene=pepD;product=aminoacyl-histidine dipeptidase;protein_id=CAL13238.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3492002	3493249	.	+	.	ID=id5668;Note=Pfam match to entry PF01546 Peptidase_M20%2CPeptidase family M20/M25/M40%2C score 77.9%2C E-value 1.4e-20;gbkey=misc_feature;gene=pepD;inference=protein motif:PFAM:PF01546
AM286415.1	EMBL	gene	3493491	3494549	.	-	.	ID=gene3156;Name=dinP;gbkey=Gene;gene=dinP;gene_biotype=protein_coding;locus_tag=YE3207
AM286415.1	EMBL	CDS	3493491	3494549	.	-	0	ID=cds3069;Parent=gene3156;Dbxref=EnsemblGenomes-Gn:YE3207,EnsemblGenomes-Tr:CAL13239,GOA:A1JNY3,InterPro:IPR001126,InterPro:IPR017961,InterPro:IPR017963,InterPro:IPR022880,InterPro:IPR024728,NCBI_GP:CAL13239.1;Name=CAL13239.1;gbkey=CDS;gene=dinP;product=DNA-damage-inducible protein P;protein_id=CAL13239.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3493527	3494531	.	-	.	ID=id5669;Note=Pfam match to entry PF00817 IMS%2C impB/mucB/samB family%2C score 411.7%2C E-value 4.4e-121;gbkey=misc_feature;gene=dinP;inference=protein motif:PFAM:PF00817
AM286415.1	EMBL	gene	3494652	3495044	.	-	.	ID=gene3157;Name=YE3208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3208
AM286415.1	EMBL	CDS	3494652	3495044	.	-	0	ID=cds3070;Parent=gene3157;Dbxref=EnsemblGenomes-Gn:YE3208,EnsemblGenomes-Tr:CAL13240,InterPro:IPR006175,InterPro:IPR013813,UniProtKB/TrEMBL:A1JNY4,NCBI_GP:CAL13240.1;Name=CAL13240.1;Note=Similar to Ralstonia solanacearum hypothetical protein Rsp1515 or Rs04792 SWALL:Q8XPX1 (EMBL:AL646085) (130 aa) fasta scores: E(): 1.7e-22%2C 48.81 38d in 127 aa and to Fusobacterium nucleatum translation initiation inhibitor Fn1973 SWALL:Q8RHN7 (EMBL:AE010499) (128 aa) fasta scores: E(): 2.4e-10%2C 34.64 38d in 127 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646085;product=conserved hypothetical protein;protein_id=CAL13240.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3494661	3495014	.	-	.	ID=id5670;Note=Pfam match to entry PF01042 UPF0076%2CEndoribonuclease L-PSP%2C score 121.6%2C E-value 9.8e-34;gbkey=misc_feature;inference=protein motif:PFAM:PF01042
AM286415.1	EMBL	gene	3495044	3496012	.	-	.	ID=gene3158;Name=YE3209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3209
AM286415.1	EMBL	CDS	3495044	3496012	.	-	0	ID=cds3071;Parent=gene3158;Dbxref=EnsemblGenomes-Gn:YE3209,EnsemblGenomes-Tr:CAL13241,GOA:A1JNY5,InterPro:IPR001926,UniProtKB/TrEMBL:A1JNY5,NCBI_GP:CAL13241.1;Name=CAL13241.1;Note=Similar to Prokaryotic and Eukaryotic hydroxy amino acid deaminases including: Escherichia coli%2C and Escherichia coli O157:H7 threonine dehydratase catabolic TdcB or b3117 or z4469 or ecs3997 SWALL:THD2_ECOLI (SWALL:P05792) (329 aa) fasta scores: E(): 4.3e-41%2C 39.62 id in 323 aa%2C Ralstonia solanacearum probable amino-acid dehydratase protein Rsp1516 or Rs04793 SWALL:Q8XPX0 (EMBL:AL646085) (323 aa) fasta scores: E(): 7.1e-85%2C70.21 38d in 319 aa and to Mus musculus serine racemase SrR SWALL:SRR_MOUSE (SWALL:Q9QZX7) (339 aa) fasta scores: E(): 1.5e-39%2C 39.56 38d in 321 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9QZX7;product=hydroxy amino acid dehydratase;protein_id=CAL13241.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3495089	3495961	.	-	.	ID=id5671;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 280.9%2CE-value 1.1e-81;gbkey=misc_feature;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	gene	3496015	3496647	.	-	.	ID=gene3159;Name=YE3210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3210
AM286415.1	EMBL	CDS	3496015	3496647	.	-	0	ID=cds3072;Parent=gene3159;Dbxref=EnsemblGenomes-Gn:YE3210,EnsemblGenomes-Tr:CAL13242,GOA:A1JNY6,InterPro:IPR009057,InterPro:IPR013559,UniProtKB/TrEMBL:A1JNY6,NCBI_GP:CAL13242.1;Name=CAL13242.1;Note=Similar to Ralstonia solanacearum hypothetical protein Rsp1517 or Rs04794 SWALL:Q8XPW9 (EMBL:AL646085) (214 aa) fasta scores: E(): 2.1e-47%2C 66.5 38d in 209 aa and to Streptomyces coelicolor hypothetical protein Sco0822 or Scf43a.12C SWALL:Q9XAA3 (EMBL:AL096837) (226 aa) fasta scores: E(): 8.4e-13%2C 28.43 38d in 204 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646085;product=conserved hypothetical protein;protein_id=CAL13242.1;transl_table=11
AM286415.1	EMBL	gene	3496761	3497861	.	-	.	ID=gene3160;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=YE3211
AM286415.1	EMBL	CDS	3496761	3497861	.	-	0	ID=cds3073;Parent=gene3160;Dbxref=EnsemblGenomes-Gn:YE3211,EnsemblGenomes-Tr:CAL13243,GOA:A1JNY7,InterPro:IPR000291,InterPro:IPR005905,InterPro:IPR011095,InterPro:IPR011127,InterPro:IPR011761,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR016185,UniProtKB/TrEMBL:A1JNY7,NCBI_GP:CAL13243.1;Name=CAL13243.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 D-alanine--D-alanine ligase A DdlA or b0381 or z0477 or ecs0431 SWALL:DDLA_ECOLI (SWALL:P23844) (364 aa) fasta scores: E(): 3.2e-101%2C 69.78 38d in 364 aa and to Salmonella typhimurium%2C and Salmonella typhi D-alanine--D-alanine ligase A DdlA or stm0380 or sty0412 SWALL:DDLA_SALTY (SWALL:P15051) (363 aa) fasta scores: E(): 6.6e-101%2C 69.14 38d in 363 aa;gbkey=CDS;gene=ddlA;inference=similar to sequence:UniProtKB:P23844;product=D-alanine--D-alanine ligase A;protein_id=CAL13243.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3496818	3497852	.	-	.	ID=id5672;Note=Pfam match to entry PF01820 Dala_Dala_ligas%2C D-ala D-ala ligase%2C score 586.5%2C E-value 1.1e-173;gbkey=misc_feature;gene=ddlA;inference=protein motif:PFAM:PF01820
AM286415.1	EMBL	sequence_feature	3496899	3496985	.	-	.	ID=id5673;Note=PS00844 D-alanine--D-alanine ligase signature 2.;gbkey=misc_feature;gene=ddlA;inference=protein motif:Prosite:PS00844
AM286415.1	EMBL	sequence_feature	3497508	3497543	.	-	.	ID=id5674;Note=PS00843 D-alanine--D-alanine ligase signature 1.;gbkey=misc_feature;gene=ddlA;inference=protein motif:Prosite:PS00843
AM286415.1	EMBL	sequence_feature	3497820	3497843	.	-	.	ID=id5675;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ddlA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3498434	3499222	.	+	.	ID=gene3161;Name=YE3212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3212
AM286415.1	EMBL	CDS	3498434	3499222	.	+	0	ID=cds3074;Parent=gene3161;Dbxref=EnsemblGenomes-Gn:YE3212,EnsemblGenomes-Tr:CAL13244,GOA:A1JNY8,InterPro:IPR004129,InterPro:IPR017946,UniProtKB/TrEMBL:A1JNY8,NCBI_GP:CAL13244.1;Name=CAL13244.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13244.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3498434	3499198	.	+	.	ID=id5676;Note=Pfam match to entry PF03009 GDPD%2C Glycerophosphoryl diester phosphodiesterase family%2C score 7.0%2C E-value 8.3e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF03009
AM286415.1	EMBL	gene	3499362	3499589	.	-	.	ID=gene3162;Name=YE3213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3213
AM286415.1	EMBL	CDS	3499362	3499589	.	-	0	ID=cds3075;Parent=gene3162;Dbxref=EnsemblGenomes-Gn:YE3213,EnsemblGenomes-Tr:CAL13245,InterPro:IPR007495,UniProtKB/TrEMBL:A1JNY9,NCBI_GP:CAL13245.1;Name=CAL13245.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13245.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3499515	3499580	.	-	.	ID=id5677;Note=1 probable transmembrane helix predicted for YE3213 by TMHMM2.0 at aa 4-25;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3499602	3500624	.	-	.	ID=gene3163;Name=apbE;gbkey=Gene;gene=apbE;gene_biotype=protein_coding;locus_tag=YE3214
AM286415.1	EMBL	CDS	3499602	3500624	.	-	0	ID=cds3076;Parent=gene3163;Dbxref=EnsemblGenomes-Gn:YE3214,EnsemblGenomes-Tr:CAL13246,GOA:A1JNZ0,InterPro:IPR003374,InterPro:IPR024932,UniProtKB/TrEMBL:A1JNZ0,NCBI_GP:CAL13246.1;Name=CAL13246.1;gbkey=CDS;gene=apbE;product=thiamine biosynthesis lipoprotein;protein_id=CAL13246.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3499659	3500600	.	-	.	ID=id5678;Note=Pfam match to entry PF02424 ApbE%2C ApbE family %2Cscore 393.0%2C E-value 1.8e-115;gbkey=misc_feature;gene=apbE;inference=protein motif:PFAM:PF02424
AM286415.1	EMBL	sequence_feature	3500562	3500594	.	-	.	ID=id5679;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=apbE;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3500664	3501887	.	-	.	ID=gene3164;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;gene_synonym=nqr6;locus_tag=YE3215
AM286415.1	EMBL	CDS	3500664	3501887	.	-	0	ID=cds3077;Parent=gene3164;Dbxref=EnsemblGenomes-Gn:YE3215,EnsemblGenomes-Tr:CAL13247,GOA:A1JNZ2,InterPro:IPR001041,InterPro:IPR001433,InterPro:IPR001709,InterPro:IPR008333,InterPro:IPR010205,InterPro:IPR012675,InterPro:IPR017927,InterPro:IPR017938,NCBI_GP:CAL13247.1;Name=CAL13247.1;gbkey=CDS;gene=nqrF;product=NADH-uniquinone oxidoreductase subunit F;protein_id=CAL13247.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3500721	3501074	.	-	.	ID=id5680;Note=Pfam match to entry PF00175 NAD_binding_1%2COxidoreductase NAD-binding domain%2C score 102.2%2C E-value 6.8e-28;gbkey=misc_feature;gene=nqrF;inference=protein motif:PFAM:PF00175
AM286415.1	EMBL	sequence_feature	3501087	3501401	.	-	.	ID=id5681;Note=Pfam match to entry PF00970 FAD_binding_6%2COxidoreductase FAD-binding domain%2C score 9.2%2C E-value 0.00011;gbkey=misc_feature;gene=nqrF;inference=protein motif:PFAM:PF00970
AM286415.1	EMBL	sequence_feature	3501540	3501782	.	-	.	ID=id5682;Note=Pfam match to entry PF00111 fer2%2C 2Fe-2S iron-sulfur cluster binding domain%2C score 39.8%2C E-value 3.9e-09;gbkey=misc_feature;gene=nqrF;inference=protein motif:PFAM:PF00111
AM286415.1	EMBL	sequence_feature	3501681	3501713	.	-	.	ID=id5683;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=nqrF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3501816	3501884	.	-	.	ID=id5684;Note=1 probable transmembrane helix predicted for YE3215 by TMHMM2.0 at aa 2-24;gbkey=misc_feature;gene=nqrF;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3501903	3502499	.	-	.	ID=gene3165;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;gene_synonym=nqr5;locus_tag=YE3216
AM286415.1	EMBL	CDS	3501903	3502499	.	-	0	ID=cds3078;Parent=gene3165;Dbxref=EnsemblGenomes-Gn:YE3216,EnsemblGenomes-Tr:CAL13248,GOA:A1JNZ3,InterPro:IPR003667,InterPro:IPR010967,NCBI_GP:CAL13248.1;Name=CAL13248.1;gbkey=CDS;gene=nqrE;product=Na+-translocating NADH-quinone reductase subunit E;protein_id=CAL13248.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3501906	3502499	.	-	.	ID=id5685;Note=Pfam match to entry PF02508 Rnf-Nqr%2C Rnf-Nqr subunit%2C membrane protein%2C score 399.1%2C E-value 2.9e-117;gbkey=misc_feature;gene=nqrE;inference=protein motif:PFAM:PF02508
AM286415.1	EMBL	sequence_feature	3502407	3502466	.	-	.	ID=id5686;Note=6 probable transmembrane helices predicted for YE3216 by TMHMM2.0 at aa 12-31%2C 41-63%2C 75-94%2C 104-126%2C139-161 and 171-193;gbkey=misc_feature;gene=nqrE;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3502311	3502379	.	-	.	ID=id5686;Note=6 probable transmembrane helices predicted for YE3216 by TMHMM2.0 at aa 12-31%2C 41-63%2C 75-94%2C 104-126%2C139-161 and 171-193;gbkey=misc_feature;gene=nqrE;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3502218	3502277	.	-	.	ID=id5686;Note=6 probable transmembrane helices predicted for YE3216 by TMHMM2.0 at aa 12-31%2C 41-63%2C 75-94%2C 104-126%2C139-161 and 171-193;gbkey=misc_feature;gene=nqrE;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3502122	3502190	.	-	.	ID=id5686;Note=6 probable transmembrane helices predicted for YE3216 by TMHMM2.0 at aa 12-31%2C 41-63%2C 75-94%2C 104-126%2C139-161 and 171-193;gbkey=misc_feature;gene=nqrE;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3502017	3502085	.	-	.	ID=id5686;Note=6 probable transmembrane helices predicted for YE3216 by TMHMM2.0 at aa 12-31%2C 41-63%2C 75-94%2C 104-126%2C139-161 and 171-193;gbkey=misc_feature;gene=nqrE;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3501921	3501989	.	-	.	ID=id5686;Note=6 probable transmembrane helices predicted for YE3216 by TMHMM2.0 at aa 12-31%2C 41-63%2C 75-94%2C 104-126%2C139-161 and 171-193;gbkey=misc_feature;gene=nqrE;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	3502506	3503135	.	-	.	ID=gene3166;Name=nqrD;gbkey=Gene;gene=nqrD;gene_biotype=protein_coding;gene_synonym=nqr4;locus_tag=YE3217
AM286415.1	EMBL	CDS	3502506	3503135	.	-	0	ID=cds3079;Parent=gene3166;Dbxref=EnsemblGenomes-Gn:YE3217,EnsemblGenomes-Tr:CAL13249,GOA:A1JNZ5,InterPro:IPR003667,InterPro:IPR011292,NCBI_GP:CAL13249.1;Name=CAL13249.1;gbkey=CDS;gene=nqrD;product=Na+-translocating NADH-quinone reductase subunit D;protein_id=CAL13249.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3502950	3503018	.	-	.	ID=id5687;Note=4 probable transmembrane helices predicted for YE3217 by TMHMM2.0 at aa 40-62%2C 72-94%2C 101-123 and 179-198;gbkey=misc_feature;gene=nqrD;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3502854	3502922	.	-	.	ID=id5687;Note=4 probable transmembrane helices predicted for YE3217 by TMHMM2.0 at aa 40-62%2C 72-94%2C 101-123 and 179-198;gbkey=misc_feature;gene=nqrD;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3502767	3502835	.	-	.	ID=id5687;Note=4 probable transmembrane helices predicted for YE3217 by TMHMM2.0 at aa 40-62%2C 72-94%2C 101-123 and 179-198;gbkey=misc_feature;gene=nqrD;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3502542	3502601	.	-	.	ID=id5687;Note=4 probable transmembrane helices predicted for YE3217 by TMHMM2.0 at aa 40-62%2C 72-94%2C 101-123 and 179-198;gbkey=misc_feature;gene=nqrD;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3502548	3503126	.	-	.	ID=id5688;Note=Pfam match to entry PF02508 Rnf-Nqr%2C Rnf-Nqr subunit%2C membrane protein%2C score 334.8%2C E-value 6.4e-98;gbkey=misc_feature;gene=nqrD;inference=protein motif:PFAM:PF02508
AM286415.1	EMBL	gene	3503128	3503928	.	-	.	ID=gene3167;Name=nqrC;gbkey=Gene;gene=nqrC;gene_biotype=protein_coding;gene_synonym=nqr3;locus_tag=YE3218
AM286415.1	EMBL	CDS	3503128	3503928	.	-	0	ID=cds3080;Parent=gene3167;Dbxref=EnsemblGenomes-Gn:YE3218,EnsemblGenomes-Tr:CAL13250,GOA:A1JNZ6,InterPro:IPR007329,InterPro:IPR010204,UniProtKB/TrEMBL:A1JNZ6,NCBI_GP:CAL13250.1;Name=CAL13250.1;gbkey=CDS;gene=nqrC;product=Na+-translocating NADH-quinone reductase subunit C;protein_id=CAL13250.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3503425	3503448	.	-	.	ID=id5689;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=nqrC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3503818	3503886	.	-	.	ID=id5690;Note=1 probable transmembrane helix predicted for YE3218 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;gene=nqrC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3503918	3505159	.	-	.	ID=gene3168;Name=nqrB;gbkey=Gene;gene=nqrB;gene_biotype=protein_coding;gene_synonym=nqr2;locus_tag=YE3219
AM286415.1	EMBL	CDS	3503918	3505159	.	-	0	ID=cds3081;Parent=gene3168;Dbxref=EnsemblGenomes-Gn:YE3219,EnsemblGenomes-Tr:CAL13251,GOA:A1JNZ7,InterPro:IPR004338,InterPro:IPR010966,UniProtKB/TrEMBL:A1JNZ7,NCBI_GP:CAL13251.1;Name=CAL13251.1;gbkey=CDS;gene=nqrB;product=NADH-ubiquinone oxidoreductase subunit B;protein_id=CAL13251.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3503936	3505048	.	-	.	ID=id5691;Note=Pfam match to entry PF03116 NQR2_RnfD_RnfE%2C NQR2%2CRnfD%2C RnfE family%2C score 660.1%2C E-value 7.3e-196;gbkey=misc_feature;gene=nqrB;inference=protein motif:PFAM:PF03116
AM286415.1	EMBL	sequence_feature	3504920	3504988	.	-	.	ID=id5692;Note=8 probable transmembrane helices predicted for YE3219 by TMHMM2.0 at aa 58-80%2C 125-147%2C 159-181%2C 268-290%2C297-316%2C 326-345%2C 358-375 and 379-401;gbkey=misc_feature;gene=nqrB;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3504719	3504787	.	-	.	ID=id5692;Note=8 probable transmembrane helices predicted for YE3219 by TMHMM2.0 at aa 58-80%2C 125-147%2C 159-181%2C 268-290%2C297-316%2C 326-345%2C 358-375 and 379-401;gbkey=misc_feature;gene=nqrB;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3504617	3504685	.	-	.	ID=id5692;Note=8 probable transmembrane helices predicted for YE3219 by TMHMM2.0 at aa 58-80%2C 125-147%2C 159-181%2C 268-290%2C297-316%2C 326-345%2C 358-375 and 379-401;gbkey=misc_feature;gene=nqrB;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3504290	3504358	.	-	.	ID=id5692;Note=8 probable transmembrane helices predicted for YE3219 by TMHMM2.0 at aa 58-80%2C 125-147%2C 159-181%2C 268-290%2C297-316%2C 326-345%2C 358-375 and 379-401;gbkey=misc_feature;gene=nqrB;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3504212	3504271	.	-	.	ID=id5692;Note=8 probable transmembrane helices predicted for YE3219 by TMHMM2.0 at aa 58-80%2C 125-147%2C 159-181%2C 268-290%2C297-316%2C 326-345%2C 358-375 and 379-401;gbkey=misc_feature;gene=nqrB;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3504125	3504184	.	-	.	ID=id5692;Note=8 probable transmembrane helices predicted for YE3219 by TMHMM2.0 at aa 58-80%2C 125-147%2C 159-181%2C 268-290%2C297-316%2C 326-345%2C 358-375 and 379-401;gbkey=misc_feature;gene=nqrB;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3504035	3504088	.	-	.	ID=id5692;Note=8 probable transmembrane helices predicted for YE3219 by TMHMM2.0 at aa 58-80%2C 125-147%2C 159-181%2C 268-290%2C297-316%2C 326-345%2C 358-375 and 379-401;gbkey=misc_feature;gene=nqrB;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3503957	3504025	.	-	.	ID=id5692;Note=8 probable transmembrane helices predicted for YE3219 by TMHMM2.0 at aa 58-80%2C 125-147%2C 159-181%2C 268-290%2C297-316%2C 326-345%2C 358-375 and 379-401;gbkey=misc_feature;gene=nqrB;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	3505163	3506506	.	-	.	ID=gene3169;Name=nqrA;gbkey=Gene;gene=nqrA;gene_biotype=protein_coding;gene_synonym=nqr1;locus_tag=YE3220
AM286415.1	EMBL	CDS	3505163	3506506	.	-	0	ID=cds3082;Parent=gene3169;Dbxref=EnsemblGenomes-Gn:YE3220,EnsemblGenomes-Tr:CAL13252,GOA:A1JNZ8,InterPro:IPR008703,InterPro:IPR022615,NCBI_GP:CAL13252.1;Name=CAL13252.1;gbkey=CDS;gene=nqrA;product=NADH-ubiquinone oxidoreductase subunit A;protein_id=CAL13252.1;transl_table=11
AM286415.1	EMBL	gene	3506998	3507747	.	+	.	ID=gene3170;Name=yafK;gbkey=Gene;gene=yafK;gene_biotype=protein_coding;locus_tag=YE3221
AM286415.1	EMBL	CDS	3506998	3507747	.	+	0	ID=cds3083;Parent=gene3170;Dbxref=EnsemblGenomes-Gn:YE3221,EnsemblGenomes-Tr:CAL13253,GOA:A1JNZ9,InterPro:IPR005490,UniProtKB/TrEMBL:A1JNZ9,NCBI_GP:CAL13253.1;Name=CAL13253.1;gbkey=CDS;gene=yafK;product=putative exported protein;protein_id=CAL13253.1;transl_table=11
AM286415.1	EMBL	gene	3507721	3508485	.	-	.	ID=gene3171;Name=YE3222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3222
AM286415.1	EMBL	CDS	3507721	3508485	.	-	0	ID=cds3084;Parent=gene3171;Dbxref=EnsemblGenomes-Gn:YE3222,EnsemblGenomes-Tr:CAL13254,InterPro:IPR017932,InterPro:IPR026869,InterPro:IPR029055,UniProtKB/TrEMBL:A1JP01,NCBI_GP:CAL13254.1;Name=CAL13254.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13254.1;transl_table=11
AM286415.1	EMBL	gene	3508587	3509168	.	-	.	ID=gene3172;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;gene_synonym=gmhA,tfrA;locus_tag=YE3223
AM286415.1	EMBL	CDS	3508587	3509168	.	-	0	ID=cds3085;Parent=gene3172;Dbxref=EnsemblGenomes-Gn:YE3223,EnsemblGenomes-Tr:CAL13255,GOA:A1JP02,InterPro:IPR001347,InterPro:IPR004515,NCBI_GP:CAL13255.1;Name=CAL13255.1;gbkey=CDS;gene=lpcA;product=phosphoheptose isomerase;protein_id=CAL13255.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3508593	3509057	.	-	.	ID=id5693;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 163.1%2C E-value 3.1e-46;gbkey=misc_feature;gene=lpcA;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	gene	3509424	3511871	.	+	.	ID=gene3173;Name=yafH;gbkey=Gene;gene=yafH;gene_biotype=protein_coding;locus_tag=YE3224
AM286415.1	EMBL	CDS	3509424	3511871	.	+	0	ID=cds3086;Parent=gene3173;Dbxref=EnsemblGenomes-Gn:YE3224,EnsemblGenomes-Tr:CAL13256,GOA:A1JP03,InterPro:IPR006091,InterPro:IPR009075,InterPro:IPR009100,InterPro:IPR013786,InterPro:IPR015396,UniProtKB/TrEMBL:A1JP03,NCBI_GP:CAL13256.1;Name=CAL13256.1;gbkey=CDS;gene=yafH;product=probable acyl-CoA dehydrogenase;protein_id=CAL13256.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3509433	3509486	.	+	.	ID=id5694;Note=2 probable transmembrane helices predicted for YE3224 by TMHMM2.0 at aa 4-21 and 42-61;gbkey=misc_feature;gene=yafH;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3509547	3509606	.	+	.	ID=id5694;Note=2 probable transmembrane helices predicted for YE3224 by TMHMM2.0 at aa 4-21 and 42-61;gbkey=misc_feature;gene=yafH;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	3509781	3510134	.	+	.	ID=id5695;Note=Pfam match to entry PF02771 Acyl-CoA_dh_N%2C Acyl-CoA dehydrogenase%2C N-terminal domain%2C score 15.9%2C E-value 3.9e-05;gbkey=misc_feature;gene=yafH;inference=protein motif:PFAM:PF02771
AM286415.1	EMBL	sequence_feature	3510501	3510944	.	+	.	ID=id5696;Note=Pfam match to entry PF00441 Acyl-CoA_dh%2C Acyl-CoA dehydrogenase%2C C-terminal domain%2C score 84.3%2C E-value 1.6e-22;gbkey=misc_feature;gene=yafH;inference=protein motif:PFAM:PF00441
AM286415.1	EMBL	gene	3512249	3514108	.	-	.	ID=gene3174;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=YE3225
AM286415.1	EMBL	CDS	3512249	3514108	.	-	0	ID=cds3087;Parent=gene3174;Dbxref=EnsemblGenomes-Gn:YE3225,EnsemblGenomes-Tr:CAL13257,UniProtKB/TrEMBL:A1JP04,NCBI_GP:CAL13257.1;Name=CAL13257.1;gbkey=CDS;gene=rcsC;product=putative accessory processing protein;protein_id=CAL13257.1;transl_table=11
AM286415.1	EMBL	gene	3514175	3520372	.	-	.	ID=gene3175;Name=rcsA;gbkey=Gene;gene=rcsA;gene_biotype=protein_coding;locus_tag=YE3226
AM286415.1	EMBL	CDS	3514175	3520372	.	-	0	ID=cds3088;Parent=gene3175;Dbxref=EnsemblGenomes-Gn:YE3226,EnsemblGenomes-Tr:CAL13258,InterPro:IPR006626,InterPro:IPR008638,InterPro:IPR011050,InterPro:IPR024973,UniProtKB/TrEMBL:A1JP05,NCBI_GP:CAL13258.1;Name=CAL13258.1;gbkey=CDS;gene=rcsA;product=putative adhesin;protein_id=CAL13258.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3514634	3514657	.	-	.	ID=id5697;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=rcsA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3519587	3519610	.	-	.	ID=id5698;Note=PS01118 Translation initiation factor SUI1 signature.;gbkey=misc_feature;gene=rcsA;inference=protein motif:Prosite:PS01118
AM286415.1	EMBL	gene	3520413	3522206	.	-	.	ID=gene3176;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=YE3227
AM286415.1	EMBL	CDS	3520413	3522206	.	-	0	ID=cds3089;Parent=gene3176;Dbxref=EnsemblGenomes-Gn:YE3227,EnsemblGenomes-Tr:CAL13259,InterPro:IPR013686,UniProtKB/TrEMBL:A1JP06,NCBI_GP:CAL13259.1;Name=CAL13259.1;gbkey=CDS;gene=rcsB;product=putative surface-exposed protein;protein_id=CAL13259.1;transl_table=11
AM286415.1	EMBL	gene	3522963	3524162	.	-	.	ID=gene3177;Name=mtrK;gbkey=Gene;gene=mtrK;gene_biotype=protein_coding;locus_tag=YE3228
AM286415.1	EMBL	CDS	3522963	3524162	.	-	0	ID=cds3090;Parent=gene3177;Dbxref=EnsemblGenomes-Gn:YE3228,EnsemblGenomes-Tr:CAL13260,GOA:A1JP08,InterPro:IPR002575,InterPro:IPR009212,InterPro:IPR011009,NCBI_GP:CAL13260.1;Name=CAL13260.1;Note=Similar to many proteins involved in the methionine salvage pathway: Klebsiella pneumoniae 5-methylthioribose kinase MtrK SWALL:Q9F0P1 (EMBL:AF212863) (399 aa) fasta scores: E(): 1e-114%2C 69.27 38d in 397 aa and to Fusobacterium nucleatum 5-methylthioribose kinase fn1412 SWALL:AAL95605 (EMBL:AE010646) (384 aa) fasta scores: E(): 3.3e-39%2C 31.62 38d in 389 aa;gbkey=CDS;gene=mtrK;inference=similar to sequence:INSDC:AF212863;product=probable 5-methylthioribose kinase;protein_id=CAL13260.1;transl_table=11
AM286415.1	EMBL	gene	3524356	3525396	.	+	.	ID=gene3178;Name=YE3230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3230
AM286415.1	EMBL	CDS	3524356	3525396	.	+	0	ID=cds3091;Parent=gene3178;Dbxref=EnsemblGenomes-Gn:YE3230,EnsemblGenomes-Tr:CAL13261,GOA:A1JP09,InterPro:IPR000649,InterPro:IPR005251,InterPro:IPR011559,InterPro:IPR027363,NCBI_GP:CAL13261.1;Name=CAL13261.1;Note=Similar to many proteins involved in the methionine salvage pathway that resemble translation initiation factors including: Thermotoga maritima putative translation initiation factor EIF-2b tm0911 SWALL:E2B_THEMA (SWALL:Q9X013) (343 aa) fasta scores: E(): 4.1e-45%2C 45.37 38d in 335 aa%2C and to Xylella fastidiosa putative translation initiation factor EIF-2b xf2553 SWALL:E2B_XYLFA (SWALL:Q9PAG5) (354 aa) fasta scores: E(): 3.6e-43%2C 47.14 38d in 333 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9X013;product=putative translation initiation factor;protein_id=CAL13261.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3524467	3525360	.	+	.	ID=id5699;Note=Pfam match to entry PF01008 IF-2B%2C Initiation factor 2 subunit family%2C score 288.7%2C E-value 4.7e-84;gbkey=misc_feature;inference=protein motif:PFAM:PF01008
AM286415.1	EMBL	gene	3525538	3526080	.	-	.	ID=gene3179;Name=YE3231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3231
AM286415.1	EMBL	CDS	3525538	3526080	.	-	0	ID=cds3092;Parent=gene3179;Dbxref=EnsemblGenomes-Gn:YE3231,EnsemblGenomes-Tr:CAL13262,GOA:A1JP10,InterPro:IPR004313,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR023956,NCBI_GP:CAL13262.1;Name=CAL13262.1;Note=Similar to many proteins involved in the methionine salvage pathway: Klebsiella oxytoca e-2/e-2' protein SWALL:Q9ZFE7 (EMBL:AF102514) (179 aa) fasta scores: E(): 4.3e-56%2C 75.84 38d in 178 aa%2C Pseudomonas aeruginosa probable oxidase pa1684 SWALL:Q9I341 (EMBL:AE004595) (181 aa) fasta scores: E(): 7.1e-40%2C 56.66 38d in 180 aa and to Xanthomonas campestris dioxygenase Xcc1819 SWALL:Q8P9N4 (EMBL:AE012284) (188 aa) fasta scores: E(): 3.2e-37%2C 52.8 id in 178 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF102514;product=e-2/e-2' protein;protein_id=CAL13262.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3525586	3525996	.	-	.	ID=id5700;Note=Pfam match to entry PF03079 ARD%2C ARD/ARD' family %2Cscore 99.0%2C E-value 6e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF03079
AM286415.1	EMBL	gene	3526077	3526766	.	-	.	ID=gene3180;Name=MasA;gbkey=Gene;gene=MasA;gene_biotype=protein_coding;locus_tag=YE3232
AM286415.1	EMBL	CDS	3526077	3526766	.	-	0	ID=cds3093;Parent=gene3180;Dbxref=EnsemblGenomes-Gn:YE3232,EnsemblGenomes-Tr:CAL13263,GOA:A1JP11,InterPro:IPR006439,InterPro:IPR023214,InterPro:IPR023943,NCBI_GP:CAL13263.1;Name=CAL13263.1;Note=Similar to many proteins involved in the methionine salvage pathway: Klebsiella oxytoca bifunctional enolase-phosphatase E-1 enzyme MasA SWALL:Q48389 (EMBL:U00148) (229 aa) fasta scores: E(): 4.3e-52%2C 65.5 id in 229 aa and to Pseudomonas aeruginosa enolase-phosphatase E-1 MasA or Pa1685 SWALL:Q9I340 (EMBL:AE004595) (249 aa) fasta scores: E(): 3.1e-36%2C52.94 38d in 204 aa;gbkey=CDS;gene=MasA;inference=similar to sequence:INSDC:U00148;product=bifunctional enolase-phosphatase E-1 enzyme;protein_id=CAL13263.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3526152	3526751	.	-	.	ID=id5701;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 18.8%2C E-value 0.0002;gbkey=misc_feature;gene=MasA;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	3526763	3527452	.	-	.	ID=gene3181;Name=YE3233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3233
AM286415.1	EMBL	CDS	3526763	3527452	.	-	0	ID=cds3094;Parent=gene3181;Dbxref=EnsemblGenomes-Gn:YE3233,EnsemblGenomes-Tr:CAL13264,GOA:A1JP13,InterPro:IPR001303,InterPro:IPR017714,NCBI_GP:CAL13264.1;Name=CAL13264.1;Note=Similar to many proteins involved in the methionine salvage pathway;gbkey=CDS;product=putative sugar aldolase;protein_id=CAL13264.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3526766	3527374	.	-	.	ID=id5702;Note=Pfam match to entry PF00596 Aldolase_II%2C Class II Aldolase and Adducin N-terminal domain%2C score 121.3%2CE-value 1.2e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00596
AM286415.1	EMBL	gene	3527612	3528772	.	+	.	ID=gene3182;Name=YE3234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3234
AM286415.1	EMBL	CDS	3527612	3528772	.	+	0	ID=cds3095;Parent=gene3182;Dbxref=EnsemblGenomes-Gn:YE3234,EnsemblGenomes-Tr:CAL13265,GOA:A1JP14,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JP14,NCBI_GP:CAL13265.1;Name=CAL13265.1;Note=Similar to many proteins involved in the methionine salvage pathway: to Escherichia coli hypothetical aminotransferase YbdL or B0600 SWALL:YBDL_ECOLI (SWALL:P77806) (386 aa) fasta scores: E(): 6.5e-121%2C75.38 38d in 386 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77806;product=putative aminotransferase;protein_id=CAL13265.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3527834	3528763	.	+	.	ID=id5703;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 146.5%2C E-value 3e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	3528299	3528322	.	+	.	ID=id5704;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3528760	3529530	.	+	.	ID=gene3183;Name=YE3235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3235
AM286415.1	EMBL	CDS	3528760	3529530	.	+	0	ID=cds3096;Parent=gene3183;Dbxref=EnsemblGenomes-Gn:YE3235,EnsemblGenomes-Tr:CAL13266,GOA:A1JP16,InterPro:IPR001110,InterPro:IPR003010,UniProtKB/TrEMBL:A1JP16,NCBI_GP:CAL13266.1;Name=CAL13266.1;gbkey=CDS;product=putative hydrolase;protein_id=CAL13266.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3528766	3529521	.	+	.	ID=id5705;Note=Pfam match to entry PF00795 CN_hydrolase%2CCarbon-nitrogen hydrolase%2C score 64.6%2C E-value 1.3e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00795
AM286415.1	EMBL	gene	3530422	3531585	.	+	.	ID=gene3184;Name=YE3237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3237
AM286415.1	EMBL	CDS	3530422	3531585	.	+	0	ID=cds3097;Parent=gene3184;Dbxref=EnsemblGenomes-Gn:YE3237,EnsemblGenomes-Tr:CAL13267,GOA:A1JP17,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JP17,NCBI_GP:CAL13267.1;Name=CAL13267.1;gbkey=CDS;product=probable sugar transporter;protein_id=CAL13267.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3530425	3531567	.	+	.	ID=id5706;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -101.2%2C E-value 0.00028;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	3530530	3530598	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	3530617	3530676	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	3530686	3530754	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	3530791	3530850	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	3530878	3530946	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	3531037	3531105	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	3531115	3531183	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	3531220	3531279	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	3531289	3531348	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	3531397	3531465	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	3531475	3531543	.	+	.	ID=id5707;Note=11 probable transmembrane helices predicted for YE3237 by TMHMM2.0 at aa 37-59%2C 66-85%2C 89-111%2C 124-143%2C153-175%2C 206-228%2C 232-254%2C 267-286%2C 290-309%2C 326-348 and 352-374;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	3531718	3532491	.	+	.	ID=gene3185;Name=YE3238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3238
AM286415.1	EMBL	CDS	3531718	3532491	.	+	0	ID=cds3098;Parent=gene3185;Dbxref=EnsemblGenomes-Gn:YE3238,EnsemblGenomes-Tr:CAL13268,InterPro:IPR011606,UniProtKB/TrEMBL:A1JP18,NCBI_GP:CAL13268.1;Name=CAL13268.1;gbkey=CDS;product=putative amino acid transporter;protein_id=CAL13268.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3531778	3531846	.	+	.	ID=id5708;Note=5 probable transmembrane helices predicted for YE3238 by TMHMM2.0 at aa 21-43%2C 53-84%2C 143-165%2C 175-197 and 204-226;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3531874	3531969	.	+	.	ID=id5708;Note=5 probable transmembrane helices predicted for YE3238 by TMHMM2.0 at aa 21-43%2C 53-84%2C 143-165%2C 175-197 and 204-226;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3532144	3532212	.	+	.	ID=id5708;Note=5 probable transmembrane helices predicted for YE3238 by TMHMM2.0 at aa 21-43%2C 53-84%2C 143-165%2C 175-197 and 204-226;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3532240	3532308	.	+	.	ID=id5708;Note=5 probable transmembrane helices predicted for YE3238 by TMHMM2.0 at aa 21-43%2C 53-84%2C 143-165%2C 175-197 and 204-226;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3532327	3532395	.	+	.	ID=id5708;Note=5 probable transmembrane helices predicted for YE3238 by TMHMM2.0 at aa 21-43%2C 53-84%2C 143-165%2C 175-197 and 204-226;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	3531793	3532290	.	+	.	ID=id5709;Note=Pfam match to entry PF03591 AzlC%2C AzlC protein %2Cscore 203.6%2C E-value 2e-58;gbkey=misc_feature;inference=protein motif:PFAM:PF03591
AM286415.1	EMBL	sequence_feature	3532381	3532413	.	+	.	ID=id5710;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3532488	3532829	.	+	.	ID=gene3186;Name=YE3239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3239
AM286415.1	EMBL	CDS	3532488	3532829	.	+	0	ID=cds3099;Parent=gene3186;Dbxref=EnsemblGenomes-Gn:YE3239,EnsemblGenomes-Tr:CAL13269,InterPro:IPR008407,UniProtKB/TrEMBL:A1JP19,NCBI_GP:CAL13269.1;Name=CAL13269.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13269.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3532500	3532568	.	+	.	ID=id5711;Note=4 probable transmembrane helices predicted for YE3239 by TMHMM2.0 at aa 5-27%2C 40-59%2C 64-83 and 90-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3532605	3532664	.	+	.	ID=id5711;Note=4 probable transmembrane helices predicted for YE3239 by TMHMM2.0 at aa 5-27%2C 40-59%2C 64-83 and 90-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3532677	3532736	.	+	.	ID=id5711;Note=4 probable transmembrane helices predicted for YE3239 by TMHMM2.0 at aa 5-27%2C 40-59%2C 64-83 and 90-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3532755	3532823	.	+	.	ID=id5711;Note=4 probable transmembrane helices predicted for YE3239 by TMHMM2.0 at aa 5-27%2C 40-59%2C 64-83 and 90-112;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3532707	3532739	.	+	.	ID=id5712;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3533001	3533513	.	+	.	ID=gene3187;Name=emrR;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;gene_synonym=mprA;locus_tag=YE3240
AM286415.1	EMBL	CDS	3533001	3533513	.	+	0	ID=cds3100;Parent=gene3187;Dbxref=EnsemblGenomes-Gn:YE3240,EnsemblGenomes-Tr:CAL13270,GOA:A1JP20,InterPro:IPR000835,InterPro:IPR011991,InterPro:IPR023187,UniProtKB/TrEMBL:A1JP20,NCBI_GP:CAL13270.1;Name=CAL13270.1;gbkey=CDS;gene=emrR;product=MarR-family transcriptional regulatory protein;protein_id=CAL13270.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3533157	3533474	.	+	.	ID=id5713;Note=Pfam match to entry PF01047 MarR%2C MarR family %2Cscore 128.1%2C E-value 1.1e-35;gbkey=misc_feature;gene=emrR;inference=protein motif:PFAM:PF01047
AM286415.1	EMBL	sequence_feature	3533259	3533363	.	+	.	ID=id5714;Note=PS01117 Bacterial regulatory proteins%2C marR family signature.;gbkey=misc_feature;gene=emrR;inference=protein motif:Prosite:PS01117
AM286415.1	EMBL	gene	3533561	3535027	.	+	.	ID=gene3188;Name=YE3241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3241
AM286415.1	EMBL	CDS	3533561	3535027	.	+	0	ID=cds3101;Parent=gene3188;Dbxref=EnsemblGenomes-Gn:YE3241,EnsemblGenomes-Tr:CAL13271,GOA:A1JP21,InterPro:IPR003423,InterPro:IPR010131,UniProtKB/TrEMBL:A1JP21,NCBI_GP:CAL13271.1;Name=CAL13271.1;Note=Similar to many outer membrane efflux proteins including: Pseudomonas aeruginosa probable outer membrane protein Pa5158 SWALL:Q9HU26 (EMBL:AE004928) (492 aa) fasta scores: E(): 9.4e-39%2C 32.84 38d in 481 aa%2C and to Vibrio cholerae multidrug resistance protein%2C putative vc1409 SWALL:Q9KS51 (EMBL:AE004219) (484 aa) fasta scores: E(): 3.9e-38%2C 30.8 38d in 474 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE004928;product=probable outer membrane efflux protein;protein_id=CAL13271.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3533750	3534370	.	+	.	ID=id5715;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 99.3%2C E-value 5e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	sequence_feature	3534410	3535009	.	+	.	ID=id5716;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 104.6%2C E-value 1.3e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	gene	3535043	3536215	.	+	.	ID=gene3189;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=YE3242
AM286415.1	EMBL	CDS	3535043	3536215	.	+	0	ID=cds3102;Parent=gene3189;Dbxref=EnsemblGenomes-Gn:YE3242,EnsemblGenomes-Tr:CAL13272,GOA:A1JP22,InterPro:IPR005694,InterPro:IPR006143,UniProtKB/TrEMBL:A1JP22,NCBI_GP:CAL13272.1;Name=CAL13272.1;gbkey=CDS;gene=emrA;product=multidrug resistance protein A;protein_id=CAL13272.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3535109	3535177	.	+	.	ID=id5717;Note=1 probable transmembrane helix predicted for YE3242 by TMHMM2.0 at aa 23-45;gbkey=misc_feature;gene=emrA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3535220	3536071	.	+	.	ID=id5718;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 273.4%2C E-value 1.9e-79;gbkey=misc_feature;gene=emrA;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	gene	3536255	3537787	.	+	.	ID=gene3190;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=YE3243
AM286415.1	EMBL	CDS	3536255	3537787	.	+	0	ID=cds3103;Parent=gene3190;Dbxref=EnsemblGenomes-Gn:YE3243,EnsemblGenomes-Tr:CAL13273,GOA:A1JP24,InterPro:IPR001411,InterPro:IPR004638,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JP24,NCBI_GP:CAL13273.1;Name=CAL13273.1;gbkey=CDS;gene=emrB;product=multidrug resistance protein B;protein_id=CAL13273.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3536291	3536359	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	3536402	3536470	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	3536489	3536557	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	3536567	3536635	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	3536669	3536737	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	3536750	3536818	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	3536852	3536908	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	3536951	3537004	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	3537065	3537124	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	3537152	3537220	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	3537257	3537310	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	3537353	3537421	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	3537689	3537745	.	+	.	ID=id5719;Note=13 probable transmembrane helices predicted for YE3243 by TMHMM2.0 at aa 13-35%2C 50-72%2C 79-101%2C 105-127%2C139-161%2C 166-188%2C 200-218%2C 233-250%2C 271-290%2C 300-322%2C335-352%2C 367-389 and 479-497;gbkey=misc_feature;gene=emrB;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	sequence_feature	3536291	3537550	.	+	.	ID=id5720;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -97.2%2C E-value 0.0002;gbkey=misc_feature;gene=emrB;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	3537350	3537382	.	+	.	ID=id5721;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=emrB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3537879	3538985	.	-	.	ID=gene3191;Name=YE3244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3244
AM286415.1	EMBL	CDS	3537879	3538985	.	-	0	ID=cds3104;Parent=gene3191;Dbxref=EnsemblGenomes-Gn:YE3244,EnsemblGenomes-Tr:CAL13274,GOA:A1JP25,InterPro:IPR001537,InterPro:IPR013123,InterPro:IPR016479,InterPro:IPR029026,InterPro:IPR029028,InterPro:IPR029064,UniProtKB/TrEMBL:A1JP25,NCBI_GP:CAL13274.1;Name=CAL13274.1;Note=Similar to many proposed methyltransferases: Yersinia pestis putative tRNA/rRNA methyltransferase Ypo3269 SWALL:Q8ZBW5 (EMBL:AJ414156) (388 aa) fasta scores: E(): 7.3e-112%2C 86.48 38d in 392 aa%2C Escherichia coli%2C and Escherichia coli O157:H7 hypothetical tRNA/rRNA methyltransferase yfif yfif or b2581 or z3865 or ecs3447 SWALL:YFIF_ECOLI (SWALL:P33635) (345 aa) fasta scores: E(): 3.3e-71%2C 62.59 38d in 377 aa and to Haemophilus influenzae hypothetical tRNA/rRNA methyltransferase Hi0424 SWALL:YFIF_HAEIN (SWALL:P44703) (351 aa) fasta scores: E(): 1.2e-31%2C 34.89 38d in 364 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P44703;product=putative trna/rRNA methyltransferase;protein_id=CAL13274.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3537906	3538328	.	-	.	ID=id5722;Note=Pfam match to entry PF00588 SpoU_methylase%2C SpoU rRNA Methylase family%2C score 166.2%2C E-value 3.7e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF00588
AM286415.1	EMBL	gene	3539206	3539646	.	+	.	ID=gene3192;Name=trxC;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=YE3245
AM286415.1	EMBL	CDS	3539206	3539646	.	+	0	ID=cds3105;Parent=gene3192;Dbxref=EnsemblGenomes-Gn:YE3245,EnsemblGenomes-Tr:CAL13275,GOA:A1JP26,InterPro:IPR005746,InterPro:IPR012336,InterPro:IPR013766,InterPro:IPR017937,UniProtKB/TrEMBL:A1JP26,NCBI_GP:CAL13275.1;Name=CAL13275.1;gbkey=CDS;gene=trxC;product=thioredoxin 2;protein_id=CAL13275.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3539305	3539625	.	+	.	ID=id5723;Note=Pfam match to entry PF00085 thiored%2C Thioredoxin %2Cscore 132.5%2C E-value 5e-37;gbkey=misc_feature;gene=trxC;inference=protein motif:PFAM:PF00085
AM286415.1	EMBL	sequence_feature	3539371	3539427	.	+	.	ID=id5724;Note=PS00194 Thioredoxin family active site.;gbkey=misc_feature;gene=trxC;inference=protein motif:Prosite:PS00194
AM286415.1	EMBL	gene	3539801	3540550	.	+	.	ID=gene3193;Name=YE3246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3246
AM286415.1	EMBL	CDS	3539801	3540550	.	+	0	ID=cds3106;Parent=gene3193;Dbxref=EnsemblGenomes-Gn:YE3246,EnsemblGenomes-Tr:CAL13276,InterPro:IPR005636,UniProtKB/TrEMBL:A1JP28,NCBI_GP:CAL13276.1;Name=CAL13276.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13276.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3539924	3540520	.	+	.	ID=id5725;Note=Pfam match to entry PF03942 DTW%2C DTW domain%2C score 204.7%2C E-value 9.5e-59;gbkey=misc_feature;inference=protein motif:PFAM:PF03942
AM286415.1	EMBL	gene	3540603	3543245	.	+	.	ID=gene3194;Name=yfiQ;gbkey=Gene;gene=yfiQ;gene_biotype=protein_coding;locus_tag=YE3247
AM286415.1	EMBL	CDS	3540603	3543245	.	+	0	ID=cds3107;Parent=gene3194;Dbxref=EnsemblGenomes-Gn:YE3247,EnsemblGenomes-Tr:CAL13277,GOA:A1JP29,InterPro:IPR000182,InterPro:IPR003781,InterPro:IPR011761,InterPro:IPR016040,InterPro:IPR016102,InterPro:IPR016181,UniProtKB/TrEMBL:A1JP29,NCBI_GP:CAL13277.1;Name=CAL13277.1;gbkey=CDS;gene=yfiQ;product=putative acetyltransferase;protein_id=CAL13277.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3540627	3540965	.	+	.	ID=id5726;Note=Pfam match to entry PF02629 CoA_binding%2C CoA binding domain%2C score 4.8%2C E-value 1.4e-05;gbkey=misc_feature;gene=yfiQ;inference=protein motif:PFAM:PF02629
AM286415.1	EMBL	sequence_feature	3542955	3543194	.	+	.	ID=id5727;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 60.0%2C E-value 3.3e-15;gbkey=misc_feature;gene=yfiQ;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	3543420	3544778	.	+	.	ID=gene3195;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;gene_synonym=pss;locus_tag=YE3248
AM286415.1	EMBL	CDS	3543420	3544778	.	+	0	ID=cds3108;Parent=gene3195;Dbxref=EnsemblGenomes-Gn:YE3248,EnsemblGenomes-Tr:CAL13278,GOA:A1JP31,InterPro:IPR001736,InterPro:IPR016270,InterPro:IPR025202,UniProtKB/TrEMBL:A1JP31,NCBI_GP:CAL13278.1;Name=CAL13278.1;gbkey=CDS;gene=pssA;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=CAL13278.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3543819	3543899	.	+	.	ID=id5728;Note=Pfam match to entry PF00614 PLDc%2C Phospholipase D. Active site motif%2C score 28.4%2C E-value 1.1e-05;gbkey=misc_feature;gene=pssA;inference=protein motif:PFAM:PF00614
AM286415.1	EMBL	sequence_feature	3544476	3544559	.	+	.	ID=id5729;Note=Pfam match to entry PF00614 PLDc%2C Phospholipase D. Active site motif%2C score 31.1%2C E-value 1.7e-06;gbkey=misc_feature;gene=pssA;inference=protein motif:PFAM:PF00614
AM286415.1	EMBL	repeat_region	3544804	3546239	.	+	.	ID=id5730;Note=IS1664;gbkey=repeat_region
AM286415.1	EMBL	gene	3544855	3545370	.	+	.	ID=gene3196;Name=YE3249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3249
AM286415.1	EMBL	CDS	3544855	3545370	.	+	0	ID=cds3109;Parent=gene3196;Dbxref=EnsemblGenomes-Gn:YE3249,EnsemblGenomes-Tr:CAL13279,GOA:A1JP32,InterPro:IPR009057,UniProtKB/TrEMBL:A1JP32,NCBI_GP:CAL13279.1;Name=CAL13279.1;Note=Similar to Yersinia pestis insertion element IS1661 DNA-binding protein YPO0996 SWALL:Q8ZHA8 (EMBL:AJ414145) (178 aa) fasta scores: E(): 7.5e-14%2C 36.51 38d in 178 aa%2Cand to Klebsiella pneumoniae OrfA SWALL:Q9AG22 (EMBL:AF345899) (173 aa) fasta scores: E(): 1.2e-18%2C40.22 38d in 174 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=insertion element IS1664 protein;protein_id=CAL13279.1;transl_table=11
AM286415.1	EMBL	gene	3545406	3546224	.	+	.	ID=gene3197;Name=YE3250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3250
AM286415.1	EMBL	CDS	3545406	3546224	.	+	0	ID=cds3110;Parent=gene3197;Dbxref=EnsemblGenomes-Gn:YE3250,EnsemblGenomes-Tr:CAL13280,GOA:A1JP33,InterPro:IPR001584,InterPro:IPR012337,InterPro:IPR025948,UniProtKB/TrEMBL:A1JP33,NCBI_GP:CAL13280.1;Name=CAL13280.1;Note=Similar to Yersinia pestis transposase for insertion sequence IS1661 SWALL:Q8XF80 (EMBL:AJ414160) (261 aa) fasta scores: E(): 5.9e-46%2C 50.19 38d in 257 aa. Also similar to Ralstonia solanacearum ISrsoII-transposase OrfB protein SWALL:Q8XX51 (EMBL:AL646069) (269 aa) fasta scores: E(): 7e-61%2C 58.11 38d in 265 aa%2C and to Escherichia coli putative transposase InsK for insertion sequence element IS150 SWALL:INSK_ECOLI (SWALL:P19769) (283 aa) fasta scores: E(): 7.1e-58%2C 53.43 38d in 262 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P19769;product=putative transposase for IS1664 element;protein_id=CAL13280.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3545709	3546188	.	+	.	ID=id5731;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 139.2%2C E-value 4.8e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	3546281	3546622	.	+	.	ID=gene3198;Name=YE3251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3251
AM286415.1	EMBL	CDS	3546281	3546622	.	+	0	ID=cds3111;Parent=gene3198;Dbxref=EnsemblGenomes-Gn:YE3251,EnsemblGenomes-Tr:CAL13281,InterPro:IPR017028,InterPro:IPR018736,UniProtKB/TrEMBL:A1JP34,NCBI_GP:CAL13281.1;Name=CAL13281.1;Note=Similar to Yersinia pestis KIM hypothetical protein Y0915 SWALL:AAM84497 (EMBL:AE013694) (113 aa) fasta scores: E(): 1.7e-39%2C 86.11 38d in 108 aa and to Yersinia pestis putative lipoprotein Ypo3274 SWALL:Q8ZBW0 (EMBL:AJ414156) (113 aa) fasta scores: E(): 1.7e-39%2C86.11 38d in 108 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414156;product=putative exported protein;protein_id=CAL13281.1;transl_table=11
AM286415.1	EMBL	gene	3546822	3547063	.	-	.	ID=gene3199;Name=5S rRNA;gbkey=Gene;gene=5S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	3546822	3547063	.	-	.	ID=rna115;Parent=gene3199;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	exon	3546822	3547063	.	-	.	ID=id5732;Parent=rna115;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	gene	3547063	3550056	.	-	.	ID=gene3200;Name=23S rRNA;gbkey=Gene;gene=23S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	3547063	3550056	.	-	.	ID=rna116;Parent=gene3200;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	exon	3547063	3550056	.	-	.	ID=id5733;Parent=rna116;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	gene	3550402	3550477	.	-	.	ID=gene3201;Name=tRNA-Ala (TGC);gbkey=Gene;gene=tRNA-Ala (TGC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3550402	3550477	.	-	.	ID=rna117;Parent=gene3201;gbkey=tRNA;gene=tRNA-Ala (TGC);product=tRNA-Ala
AM286415.1	EMBL	exon	3550402	3550477	.	-	.	ID=id5734;Parent=rna117;gbkey=tRNA;gene=tRNA-Ala (TGC);product=tRNA-Ala
AM286415.1	EMBL	gene	3550552	3550628	.	-	.	ID=gene3202;Name=tRNA-Ile (GAT);gbkey=Gene;gene=tRNA-Ile (GAT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3550552	3550628	.	-	.	ID=rna118;Parent=gene3202;gbkey=tRNA;gene=tRNA-Ile (GAT);product=tRNA-Ile
AM286415.1	EMBL	exon	3550552	3550628	.	-	.	ID=id5735;Parent=rna118;gbkey=tRNA;gene=tRNA-Ile (GAT);product=tRNA-Ile
AM286415.1	EMBL	gene	3550757	3552245	.	-	.	ID=gene3203;Name=16S rRNA;gbkey=Gene;gene=16S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	3550757	3552245	.	-	.	ID=rna119;Parent=gene3203;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	exon	3550757	3552245	.	-	.	ID=id5736;Parent=rna119;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	gene	3552706	3553272	.	-	.	ID=gene3204;Name=YE3252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3252
AM286415.1	EMBL	CDS	3552706	3553272	.	-	0	ID=cds3112;Parent=gene3204;Dbxref=EnsemblGenomes-Gn:YE3252,EnsemblGenomes-Tr:CAL13282,GOA:A1JP45,InterPro:IPR004446,InterPro:IPR006543,InterPro:IPR006549,InterPro:IPR023214,UniProtKB/TrEMBL:A1JP45,NCBI_GP:CAL13282.1;Name=CAL13282.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13282.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3552802	3553176	.	-	.	ID=id5737;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 34.0%2C E-value 4.1e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	3553459	3554490	.	+	.	ID=gene3205;Name=abc;gbkey=Gene;gene=abc;gene_biotype=protein_coding;locus_tag=YE3253
AM286415.1	EMBL	CDS	3553459	3554490	.	+	0	ID=cds3113;Parent=gene3205;Dbxref=EnsemblGenomes-Gn:YE3253,EnsemblGenomes-Tr:CAL13283,GOA:A1JP46,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR012692,InterPro:IPR017871,InterPro:IPR017908,InterPro:IPR018449,InterPro:IPR026253,InterPro:IPR027417,UniProtKB/TrEMBL:A1JP46,NCBI_GP:CAL13283.1;Name=CAL13283.1;gbkey=CDS;gene=abc;product=ABC transporter ATP-binding protein;protein_id=CAL13283.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3553549	3554109	.	+	.	ID=id5738;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 257.2%2C E-value 1.4e-74;gbkey=misc_feature;gene=abc;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3553570	3553593	.	+	.	ID=id5739;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=abc;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3553879	3553923	.	+	.	ID=id5740;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=abc;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	3554483	3555136	.	+	.	ID=gene3206;Name=YE3254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3254
AM286415.1	EMBL	CDS	3554483	3555136	.	+	0	ID=cds3114;Parent=gene3206;Dbxref=EnsemblGenomes-Gn:YE3254,EnsemblGenomes-Tr:CAL13284,GOA:A1JP48,InterPro:IPR000515,UniProtKB/TrEMBL:A1JP48,NCBI_GP:CAL13284.1;Name=CAL13284.1;gbkey=CDS;product=ABC transporter permease protein;protein_id=CAL13284.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3554540	3554608	.	+	.	ID=id5741;Note=5 probable transmembrane helices predicted for YE3254 by TMHMM2.0 at aa 20-42%2C 55-77%2C 82-104%2C 144-166 and 181-203;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3554645	3554713	.	+	.	ID=id5741;Note=5 probable transmembrane helices predicted for YE3254 by TMHMM2.0 at aa 20-42%2C 55-77%2C 82-104%2C 144-166 and 181-203;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3554726	3554794	.	+	.	ID=id5741;Note=5 probable transmembrane helices predicted for YE3254 by TMHMM2.0 at aa 20-42%2C 55-77%2C 82-104%2C 144-166 and 181-203;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3554912	3554980	.	+	.	ID=id5741;Note=5 probable transmembrane helices predicted for YE3254 by TMHMM2.0 at aa 20-42%2C 55-77%2C 82-104%2C 144-166 and 181-203;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3555023	3555091	.	+	.	ID=id5741;Note=5 probable transmembrane helices predicted for YE3254 by TMHMM2.0 at aa 20-42%2C 55-77%2C 82-104%2C 144-166 and 181-203;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	3554813	3555025	.	+	.	ID=id5742;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 66.0%2C E-value 5.3e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	3554816	3554902	.	+	.	ID=id5743;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	3555331	3556146	.	+	.	ID=gene3207;Name=YE3255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3255
AM286415.1	EMBL	CDS	3555331	3556146	.	+	0	ID=cds3115;Parent=gene3207;Dbxref=EnsemblGenomes-Gn:YE3255,EnsemblGenomes-Tr:CAL13285,InterPro:IPR004872,UniProtKB/TrEMBL:A1JP49,NCBI_GP:CAL13285.1;Name=CAL13285.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL13285.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3555367	3555399	.	+	.	ID=id5744;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3555424	3556143	.	+	.	ID=id5745;Note=Pfam match to entry PF03180 Lipoprotein_9%2C NLPA lipoprotein%2C score 486.2%2C E-value 1.7e-143;gbkey=misc_feature;inference=protein motif:PFAM:PF03180
AM286415.1	EMBL	gene	3556294	3556701	.	+	.	ID=gene3208;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=YE3256
AM286415.1	EMBL	CDS	3556294	3556701	.	+	0	ID=cds3116;Parent=gene3208;Dbxref=EnsemblGenomes-Gn:YE3256,EnsemblGenomes-Tr:CAL13286,UniProtKB/TrEMBL:A1JP50,NCBI_GP:CAL13286.1;Name=CAL13286.1;gbkey=CDS;gene=rcsF;product=putative lipoprotein;protein_id=CAL13286.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3556309	3556341	.	+	.	ID=id5746;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=rcsF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3556698	3557405	.	+	.	ID=gene3209;Name=YE3257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3257
AM286415.1	EMBL	CDS	3556698	3557405	.	+	0	ID=cds3117;Parent=gene3209;Dbxref=EnsemblGenomes-Gn:YE3257,EnsemblGenomes-Tr:CAL13287,InterPro:IPR001378,InterPro:IPR023368,InterPro:IPR023370,UniProtKB/TrEMBL:A1JP51,NCBI_GP:CAL13287.1;Name=CAL13287.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13287.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3556749	3557129	.	+	.	ID=id5747;Note=Pfam match to entry PF01980 UPF0066%2CUncharacterised protein family UPF0066%2C score 185.9%2CE-value 4.2e-53;gbkey=misc_feature;inference=protein motif:PFAM:PF01980
AM286415.1	EMBL	sequence_feature	3556956	3556991	.	+	.	ID=id5748;Note=PS01318 Uncharacterized protein family UPF0066 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01318
AM286415.1	EMBL	gene	3557513	3559231	.	+	.	ID=gene3210;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;gene_synonym=drpA;locus_tag=YE3258
AM286415.1	EMBL	CDS	3557513	3559231	.	+	0	ID=cds3118;Parent=gene3210;Dbxref=EnsemblGenomes-Gn:YE3258,EnsemblGenomes-Tr:CAL13288,GOA:A1JP53,InterPro:IPR002314,InterPro:IPR002316,InterPro:IPR004154,InterPro:IPR004500,InterPro:IPR006195,InterPro:IPR007214,InterPro:IPR023717,NCBI_GP:CAL13288.1;Name=CAL13288.1;gbkey=CDS;gene=proS;product=prolyl-tRNA synthetase;protein_id=CAL13288.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3557624	3558088	.	+	.	ID=id5749;Note=Pfam match to entry PF00587 tRNA-synt_2b%2C tRNA synthetase class II core domain (G%2C H%2C P%2C S and T)%2C score 208.0%2C E-value 9.4e-60;gbkey=misc_feature;gene=proS;inference=protein motif:PFAM:PF00587
AM286415.1	EMBL	sequence_feature	3557927	3557989	.	+	.	ID=id5750;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;gbkey=misc_feature;gene=proS;inference=protein motif:Prosite:PS00179
AM286415.1	EMBL	sequence_feature	3558917	3559219	.	+	.	ID=id5751;Note=Pfam match to entry PF03129 HGTP_anticodon%2CAnticodon binding domain%2C score 106.8%2C E-value 2.7e-29;gbkey=misc_feature;gene=proS;inference=protein motif:PFAM:PF03129
AM286415.1	EMBL	gene	3559305	3559994	.	-	.	ID=gene3211;Name=cutF;gbkey=Gene;gene=cutF;gene_biotype=protein_coding;gene_synonym=nlpE;locus_tag=YE3259
AM286415.1	EMBL	CDS	3559305	3559994	.	-	0	ID=cds3119;Parent=gene3211;Dbxref=EnsemblGenomes-Gn:YE3259,EnsemblGenomes-Tr:CAL13289,InterPro:IPR007298,UniProtKB/TrEMBL:A1JP54,NCBI_GP:CAL13289.1;Name=CAL13289.1;gbkey=CDS;gene=cutF;product=putative copper homeostasis lipoprotein;protein_id=CAL13289.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3559929	3559961	.	-	.	ID=id5752;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cutF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3560061	3560477	.	-	.	ID=gene3212;Name=YE3260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3260
AM286415.1	EMBL	CDS	3560061	3560477	.	-	0	ID=cds3120;Parent=gene3212;Dbxref=EnsemblGenomes-Gn:YE3260,EnsemblGenomes-Tr:CAL13290,GOA:A1JP55,InterPro:IPR000352,UniProtKB/TrEMBL:A1JP55,NCBI_GP:CAL13290.1;Name=CAL13290.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13290.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3560082	3560477	.	-	.	ID=id5753;Note=Pfam match to entry PF00472 RF-1%2C Peptidyl-tRNA hydrolase domain%2C score 120.5%2C E-value 2e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00472
AM286415.1	EMBL	sequence_feature	3560367	3560417	.	-	.	ID=id5754;Note=PS00745 Prokaryotic-type class I peptide chain release factors signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00745
AM286415.1	EMBL	gene	3560480	3561028	.	-	.	ID=gene3213;Name=YE3261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3261
AM286415.1	EMBL	CDS	3560480	3561028	.	-	0	ID=cds3121;Parent=gene3213;Dbxref=EnsemblGenomes-Gn:YE3261,EnsemblGenomes-Tr:CAL13291,InterPro:IPR009822,InterPro:IPR011335,UniProtKB/TrEMBL:A1JP56,NCBI_GP:CAL13291.1;Name=CAL13291.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13291.1;transl_table=11
AM286415.1	EMBL	gene	3561266	3561466	.	+	.	ID=gene3214;Name=YE3262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3262
AM286415.1	EMBL	CDS	3561266	3561466	.	+	0	ID=cds3122;Parent=gene3214;Dbxref=EnsemblGenomes-Gn:YE3262,EnsemblGenomes-Tr:CAL13292,InterPro:IPR009624,NCBI_GP:CAL13292.1;Name=CAL13292.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13292.1;transl_table=11
AM286415.1	EMBL	gene	3561453	3561713	.	+	.	ID=gene3215;Name=YE3263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3263
AM286415.1	EMBL	CDS	3561453	3561713	.	+	0	ID=cds3123;Parent=gene3215;Dbxref=EnsemblGenomes-Gn:YE3263,EnsemblGenomes-Tr:CAL13293,InterPro:IPR009778,InterPro:IPR023534,UniProtKB/TrEMBL:A1JP59,NCBI_GP:CAL13293.1;Name=CAL13293.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13293.1;transl_table=11
AM286415.1	EMBL	gene	3561800	3562114	.	-	.	ID=gene3216;Name=YE3264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3264
AM286415.1	EMBL	CDS	3561800	3562114	.	-	0	ID=cds3124;Parent=gene3216;Dbxref=EnsemblGenomes-Gn:YE3264,EnsemblGenomes-Tr:CAL13294,GOA:A1JP60,InterPro:IPR003088,InterPro:IPR008168,InterPro:IPR009056,UniProtKB/TrEMBL:A1JP60,NCBI_GP:CAL13294.1;Name=CAL13294.1;gbkey=CDS;product=putative cytochrome;protein_id=CAL13294.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3561806	3562051	.	-	.	ID=id5755;Note=Pfam match to entry PF00034 cytochrome_c%2CCytochrome c%2C score 41.5%2C E-value 1.2e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00034
AM286415.1	EMBL	sequence_feature	3561998	3562015	.	-	.	ID=id5756;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	3562290	3563675	.	-	.	ID=gene3217;Name=YE3265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3265
AM286415.1	EMBL	CDS	3562290	3563675	.	-	0	ID=cds3125;Parent=gene3217;Dbxref=EnsemblGenomes-Gn:YE3265,EnsemblGenomes-Tr:CAL13295,GOA:A1JP61,InterPro:IPR011063,InterPro:IPR012094,InterPro:IPR012795,InterPro:IPR012796,InterPro:IPR014729,InterPro:IPR015262,InterPro:IPR020825,UniProtKB/TrEMBL:A1JP61,NCBI_GP:CAL13295.1;Name=CAL13295.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13295.1;transl_table=11
AM286415.1	EMBL	gene	3563677	3564075	.	-	.	ID=gene3218;Name=YE3266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3266
AM286415.1	EMBL	CDS	3563677	3564075	.	-	0	ID=cds3126;Parent=gene3218;Dbxref=EnsemblGenomes-Gn:YE3266,EnsemblGenomes-Tr:CAL13296,InterPro:IPR004360,InterPro:IPR029068,UniProtKB/TrEMBL:A1JP62,NCBI_GP:CAL13296.1;Name=CAL13296.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13296.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3563680	3564039	.	-	.	ID=id5757;Note=Pfam match to entry PF00903 Glyoxalase%2CGlyoxalase/Bleomycin resistance protein/Dioxygenase superfamily%2C score 87.2%2C E-value 2.1e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00903
AM286415.1	EMBL	gene	3564089	3566230	.	-	.	ID=gene3219;Name=ldcC;gbkey=Gene;gene=ldcC;gene_biotype=protein_coding;locus_tag=YE3267
AM286415.1	EMBL	CDS	3564089	3566230	.	-	0	ID=cds3127;Parent=gene3219;Dbxref=EnsemblGenomes-Gn:YE3267,EnsemblGenomes-Tr:CAL13297,GOA:A1JP63,InterPro:IPR000310,InterPro:IPR005308,InterPro:IPR008286,InterPro:IPR011193,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JP63,NCBI_GP:CAL13297.1;Name=CAL13297.1;Note=Similar to Escherichia coli lysine decarboxylase%2Cconstitutive LdcC or LdcH or ldc or b0186 SWALL:DCLZ_ECOLI (SWALL:P52095) (713 aa) fasta scores: E(): 0%2C 75.88 38d in 709 aa and to Salmonella typhimurium lysine decarboxylase 2%2C constitutive LdcC or stm0234 SWALL:Q8ZRN7 (EMBL:AE008705) (713 aa) fasta scores: E(): 0%2C 76.3 38d in 709 aa;gbkey=CDS;gene=ldcC;inference=similar to sequence:UniProtKB:P52095;product=lysine decarboxylase%2C constitutive;protein_id=CAL13297.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3564119	3564523	.	-	.	ID=id5758;Note=Pfam match to entry PF03711 OKR_DC_1_C%2C Orn/Lys/Arg decarboxylase%2C C-terminal domain%2C score 221.6%2C E-value 7.4e-64;gbkey=misc_feature;gene=ldcC;inference=protein motif:PFAM:PF03711
AM286415.1	EMBL	sequence_feature	3564545	3565843	.	-	.	ID=id5759;Note=Pfam match to entry PF01276 OKR_DC_1%2C Orn/Lys/Arg decarboxylase%2C major domain%2C score 855.5%2C E-value 1.1e-254;gbkey=misc_feature;gene=ldcC;inference=protein motif:PFAM:PF01276
AM286415.1	EMBL	sequence_feature	3565103	3565147	.	-	.	ID=id5760;Note=PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site.;gbkey=misc_feature;gene=ldcC;inference=protein motif:Prosite:PS00703
AM286415.1	EMBL	sequence_feature	3565859	3566230	.	-	.	ID=id5761;Note=Pfam match to entry PF03709 OKR_DC_1_N%2C Orn/Lys/Arg decarboxylase%2C N-terminal domain%2C score 158.5%2C E-value 7.5e-45;gbkey=misc_feature;gene=ldcC;inference=protein motif:PFAM:PF03709
AM286415.1	EMBL	gene	3566535	3567494	.	-	.	ID=gene3220;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=YE3268
AM286415.1	EMBL	CDS	3566535	3567494	.	-	0	ID=cds3128;Parent=gene3220;Dbxref=EnsemblGenomes-Gn:YE3268,EnsemblGenomes-Tr:CAL13298,GOA:A1JP64,InterPro:IPR001095,InterPro:IPR011763,InterPro:IPR029045,NCBI_GP:CAL13298.1;Name=CAL13298.1;gbkey=CDS;gene=accA;product=acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha;protein_id=CAL13298.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3567042	3567485	.	-	.	ID=id5762;Note=Pfam match to entry PF03255 ACCA%2C Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit%2C score 359.6%2C E-value 2.1e-105;gbkey=misc_feature;gene=accA;inference=protein motif:PFAM:PF03255
AM286415.1	EMBL	gene	3567507	3571022	.	-	.	ID=gene3221;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;gene_synonym=polC;locus_tag=YE3269
AM286415.1	EMBL	CDS	3567507	3571022	.	-	0	ID=cds3129;Parent=gene3221;Dbxref=EnsemblGenomes-Gn:YE3269,EnsemblGenomes-Tr:CAL13299,GOA:A1JP65,InterPro:IPR003141,InterPro:IPR004013,InterPro:IPR004365,InterPro:IPR004805,InterPro:IPR011708,InterPro:IPR012340,InterPro:IPR016195,InterPro:IPR029460,UniProtKB/TrEMBL:A1JP65,NCBI_GP:CAL13299.1;Name=CAL13299.1;gbkey=CDS;gene=dnaE;product=DNA polymerase III%2C alpha chain;protein_id=CAL13299.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3567771	3568010	.	-	.	ID=id5763;Note=Pfam match to entry PF01336 tRNA_anti%2C OB-fold nucleic acid binding domain%2C score 51.0%2C E-value 1.7e-12;gbkey=misc_feature;gene=dnaE;inference=protein motif:PFAM:PF01336
AM286415.1	EMBL	sequence_feature	3570357	3570752	.	-	.	ID=id5764;Note=Pfam match to entry PF02811 PHP_C%2C PHP domain C-terminal region%2C score 126.4%2C E-value 3.4e-35;gbkey=misc_feature;gene=dnaE;inference=protein motif:PFAM:PF02811
AM286415.1	EMBL	sequence_feature	3570774	3570971	.	-	.	ID=id5765;Note=Pfam match to entry PF02231 PHP_N%2C PHP domain N-terminal region%2C score 112.6%2C E-value 5e-31;gbkey=misc_feature;gene=dnaE;inference=protein motif:PFAM:PF02231
AM286415.1	EMBL	gene	3571100	3571696	.	-	.	ID=gene3222;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;gene_synonym=b0183;locus_tag=YE3270
AM286415.1	EMBL	CDS	3571100	3571696	.	-	0	ID=cds3130;Parent=gene3222;Dbxref=EnsemblGenomes-Gn:YE3270,EnsemblGenomes-Tr:CAL13300,GOA:A1JP66,InterPro:IPR001352,InterPro:IPR012337,InterPro:IPR022898,InterPro:IPR024567,NCBI_GP:CAL13300.1;Name=CAL13300.1;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=CAL13300.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3571124	3571657	.	-	.	ID=id5766;Note=Pfam match to entry PF01351 RNase_HII%2C Ribonuclease HII%2C score 305.0%2C E-value 6.1e-89;gbkey=misc_feature;gene=rnhB;inference=protein motif:PFAM:PF01351
AM286415.1	EMBL	gene	3571693	3572877	.	-	.	ID=gene3223;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;gene_synonym=pgsB;locus_tag=YE3271
AM286415.1	EMBL	CDS	3571693	3572877	.	-	0	ID=cds3131;Parent=gene3223;Dbxref=EnsemblGenomes-Gn:YE3271,EnsemblGenomes-Tr:CAL13301,GOA:A1JP67,InterPro:IPR003835,UniProtKB/TrEMBL:A1JP67,NCBI_GP:CAL13301.1;Name=CAL13301.1;gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=CAL13301.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3571714	3572820	.	-	.	ID=id5767;Note=Pfam match to entry PF02684 LpxB%2CLipid-A-disaccharide synthetase%2C score 646.1%2C E-value 1.2e-191;gbkey=misc_feature;gene=lpxB;inference=protein motif:PFAM:PF02684
AM286415.1	EMBL	gene	3572881	3573669	.	-	.	ID=gene3224;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=YE3272
AM286415.1	EMBL	CDS	3572881	3573669	.	-	0	ID=cds3132;Parent=gene3224;Dbxref=EnsemblGenomes-Gn:YE3272,EnsemblGenomes-Tr:CAL13302,GOA:A1JP69,InterPro:IPR001451,InterPro:IPR010137,InterPro:IPR011004,InterPro:IPR018357,InterPro:IPR029098,NCBI_GP:CAL13302.1;Name=CAL13302.1;gbkey=CDS;gene=lpxA;product=acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase;protein_id=CAL13302.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3573127	3573213	.	-	.	ID=id5768;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;gbkey=misc_feature;gene=lpxA;inference=protein motif:Prosite:PS00101
AM286415.1	EMBL	sequence_feature	3573148	3573180	.	-	.	ID=id5769;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=lpxA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3573169	3573222	.	-	.	ID=id5770;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 15.8%2CE-value 0.066;gbkey=misc_feature;gene=lpxA;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3573241	3573294	.	-	.	ID=id5771;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 19.0%2CE-value 0.0076;gbkey=misc_feature;gene=lpxA;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3573295	3573348	.	-	.	ID=id5772;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 3.2%2CE-value 19;gbkey=misc_feature;gene=lpxA;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3573370	3573423	.	-	.	ID=id5773;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 8.3%2CE-value 4.2;gbkey=misc_feature;gene=lpxA;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3573460	3573513	.	-	.	ID=id5774;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 8.4%2CE-value 4;gbkey=misc_feature;gene=lpxA;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3573514	3573567	.	-	.	ID=id5775;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 11.1%2CE-value 1.7;gbkey=misc_feature;gene=lpxA;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3573526	3573612	.	-	.	ID=id5776;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;gbkey=misc_feature;gene=lpxA;inference=protein motif:Prosite:PS00101
AM286415.1	EMBL	sequence_feature	3573568	3573621	.	-	.	ID=id5777;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 21.3%2CE-value 0.0015;gbkey=misc_feature;gene=lpxA;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	gene	3573673	3574179	.	-	.	ID=gene3225;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;gene_synonym=sefA;locus_tag=YE3273
AM286415.1	EMBL	CDS	3573673	3574179	.	-	0	ID=cds3133;Parent=gene3225;Dbxref=EnsemblGenomes-Gn:YE3273,EnsemblGenomes-Tr:CAL13303,GOA:A1JP70,InterPro:IPR010084,InterPro:IPR013114,InterPro:IPR029069,NCBI_GP:CAL13303.1;Name=CAL13303.1;gbkey=CDS;gene=fabZ;product=(3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase (EC 4.2.1.-);protein_id=CAL13303.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3573760	3574158	.	-	.	ID=id5778;Note=Pfam match to entry PF01377 Thioester_dehyd%2CThioester dehydrase%2C score 286.6%2C E-value 2.1e-83;gbkey=misc_feature;gene=fabZ;inference=protein motif:PFAM:PF01377
AM286415.1	EMBL	gene	3574463	3575485	.	-	.	ID=gene3226;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;gene_synonym=firA,omsA;locus_tag=YE3274
AM286415.1	EMBL	CDS	3574463	3575485	.	-	0	ID=cds3134;Parent=gene3226;Dbxref=EnsemblGenomes-Gn:YE3274,EnsemblGenomes-Tr:CAL13304,GOA:A1JP71,InterPro:IPR001451,InterPro:IPR007691,InterPro:IPR011004,InterPro:IPR018357,InterPro:IPR020573,UniProtKB/TrEMBL:A1JP71,NCBI_GP:CAL13304.1;Name=CAL13304.1;gbkey=CDS;gene=lpxD;product=UDP-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase;protein_id=CAL13304.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3574643	3574696	.	-	.	ID=id5779;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 6.5%2CE-value 7;gbkey=misc_feature;gene=lpxD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3574715	3574768	.	-	.	ID=id5780;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 12.9%2CE-value 0.49;gbkey=misc_feature;gene=lpxD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3574727	3574813	.	-	.	ID=id5781;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;gbkey=misc_feature;gene=lpxD;inference=protein motif:Prosite:PS00101
AM286415.1	EMBL	sequence_feature	3574769	3574822	.	-	.	ID=id5782;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 19.1%2CE-value 0.0068;gbkey=misc_feature;gene=lpxD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3574835	3574888	.	-	.	ID=id5783;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 14.0%2CE-value 0.24;gbkey=misc_feature;gene=lpxD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3574946	3574999	.	-	.	ID=id5784;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 18.5%2CE-value 0.011;gbkey=misc_feature;gene=lpxD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3575000	3575053	.	-	.	ID=id5785;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 15.1%2CE-value 0.11;gbkey=misc_feature;gene=lpxD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3575012	3575098	.	-	.	ID=id5786;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;gbkey=misc_feature;gene=lpxD;inference=protein motif:Prosite:PS00101
AM286415.1	EMBL	sequence_feature	3575054	3575107	.	-	.	ID=id5787;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 22.2%2CE-value 0.00081;gbkey=misc_feature;gene=lpxD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3575102	3575188	.	-	.	ID=id5788;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;gbkey=misc_feature;gene=lpxD;inference=protein motif:Prosite:PS00101
AM286415.1	EMBL	sequence_feature	3575108	3575161	.	-	.	ID=id5789;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 16.7%2CE-value 0.035;gbkey=misc_feature;gene=lpxD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	gene	3575489	3575986	.	-	.	ID=gene3227;Name=ompH;gbkey=Gene;gene=ompH;gene_biotype=protein_coding;locus_tag=YE3275
AM286415.1	EMBL	CDS	3575489	3575986	.	-	0	ID=cds3135;Parent=gene3227;Dbxref=EnsemblGenomes-Gn:YE3275,EnsemblGenomes-Tr:CAL13305,GOA:A1JP72,InterPro:IPR005632,InterPro:IPR024930,UniProtKB/TrEMBL:A1JP72,NCBI_GP:CAL13305.1;Name=CAL13305.1;gbkey=CDS;gene=ompH;product=cationic 19 kDa outer membrane protein precursor;protein_id=CAL13305.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3575492	3575983	.	-	.	ID=id5790;Note=Pfam match to entry PF03938 OmpH%2C Outer membrane protein (OmpH-like)%2C score 143.9%2C E-value 1.9e-40;gbkey=misc_feature;gene=ompH;inference=protein motif:PFAM:PF03938
AM286415.1	EMBL	gene	3576144	3578528	.	-	.	ID=gene3228;Name=YE3276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3276
AM286415.1	EMBL	CDS	3576144	3578528	.	-	0	ID=cds3136;Parent=gene3228;Dbxref=EnsemblGenomes-Gn:YE3276,EnsemblGenomes-Tr:CAL13306,GOA:A1JP74,InterPro:IPR000184,InterPro:IPR010827,InterPro:IPR023707,UniProtKB/TrEMBL:A1JP74,NCBI_GP:CAL13306.1;Name=CAL13306.1;gbkey=CDS;product=putative surface antigen;protein_id=CAL13306.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3576147	3578522	.	-	.	ID=id5791;Note=Pfam match to entry PF01103 Bac_surface_Ag%2CBacterial surface antigen%2C score 1465.5%2C E-value 0;gbkey=misc_feature;inference=protein motif:PFAM:PF01103
AM286415.1	EMBL	sequence_feature	3578451	3578510	.	-	.	ID=id5792;Note=1 probable transmembrane helix predicted for YE3276 by TMHMM2.0 at aa 7-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3578565	3579920	.	-	.	ID=gene3229;Name=YE3277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3277
AM286415.1	EMBL	CDS	3578565	3579920	.	-	0	ID=cds3137;Parent=gene3229;Dbxref=EnsemblGenomes-Gn:YE3277,EnsemblGenomes-Tr:CAL13307,GOA:A1JP75,InterPro:IPR001478,InterPro:IPR004387,InterPro:IPR008915,UniProtKB/TrEMBL:A1JP75,NCBI_GP:CAL13307.1;Name=CAL13307.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13307.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3579840	3579908	.	-	.	ID=id5793;Note=4 probable transmembrane helices predicted for YE3277 by TMHMM2.0 at aa 5-27%2C 98-120%2C 377-399 and 427-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3579561	3579629	.	-	.	ID=id5793;Note=4 probable transmembrane helices predicted for YE3277 by TMHMM2.0 at aa 5-27%2C 98-120%2C 377-399 and 427-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3578724	3578792	.	-	.	ID=id5793;Note=4 probable transmembrane helices predicted for YE3277 by TMHMM2.0 at aa 5-27%2C 98-120%2C 377-399 and 427-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3578583	3578642	.	-	.	ID=id5793;Note=4 probable transmembrane helices predicted for YE3277 by TMHMM2.0 at aa 5-27%2C 98-120%2C 377-399 and 427-446;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3579084	3579326	.	-	.	ID=id5794;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF)%2C score 44.4%2C E-value 1.7e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00595
AM286415.1	EMBL	sequence_feature	3579795	3579890	.	-	.	ID=id5795;Note=Pfam match to entry PF02163 Peptidase_M50%2CPeptidase family M50%2C score 23.1%2C E-value 4.3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF02163
AM286415.1	EMBL	sequence_feature	3579837	3579866	.	-	.	ID=id5796;Note=PS00142 Neutral zinc metallopeptidases%2Czinc-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00142
AM286415.1	EMBL	gene	3579949	3580797	.	-	.	ID=gene3230;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;gene_synonym=cds;locus_tag=YE3278
AM286415.1	EMBL	CDS	3579949	3580797	.	-	0	ID=cds3138;Parent=gene3230;Dbxref=EnsemblGenomes-Gn:YE3278,EnsemblGenomes-Tr:CAL13308,GOA:A1JP76,InterPro:IPR000374,UniProtKB/TrEMBL:A1JP76,NCBI_GP:CAL13308.1;Name=CAL13308.1;gbkey=CDS;gene=cdsA;product=phosphatidate cytidylyltransferase;protein_id=CAL13308.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3579952	3580350	.	-	.	ID=id5797;Note=Pfam match to entry PF01148 CTP_transf_1%2CPhosphatidate cytidylyltransferase%2C score 254.1%2C E-value 1.3e-73;gbkey=misc_feature;gene=cdsA;inference=protein motif:PFAM:PF01148
AM286415.1	EMBL	sequence_feature	3580003	3580083	.	-	.	ID=id5798;Note=PS01315 Phosphatidate cytidylyltransferase signature.;gbkey=misc_feature;gene=cdsA;inference=protein motif:Prosite:PS01315
AM286415.1	EMBL	sequence_feature	3580675	3580779	.	-	.	ID=id5799;Note=6 probable transmembrane helices predicted for YE3278 by TMHMM2.0 at aa 7-41%2C 56-75%2C 87-106%2C 121-143%2C150-172 and 215-234;gbkey=misc_feature;gene=cdsA;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3580573	3580632	.	-	.	ID=id5799;Note=6 probable transmembrane helices predicted for YE3278 by TMHMM2.0 at aa 7-41%2C 56-75%2C 87-106%2C 121-143%2C150-172 and 215-234;gbkey=misc_feature;gene=cdsA;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3580480	3580539	.	-	.	ID=id5799;Note=6 probable transmembrane helices predicted for YE3278 by TMHMM2.0 at aa 7-41%2C 56-75%2C 87-106%2C 121-143%2C150-172 and 215-234;gbkey=misc_feature;gene=cdsA;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3580369	3580437	.	-	.	ID=id5799;Note=6 probable transmembrane helices predicted for YE3278 by TMHMM2.0 at aa 7-41%2C 56-75%2C 87-106%2C 121-143%2C150-172 and 215-234;gbkey=misc_feature;gene=cdsA;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3580282	3580350	.	-	.	ID=id5799;Note=6 probable transmembrane helices predicted for YE3278 by TMHMM2.0 at aa 7-41%2C 56-75%2C 87-106%2C 121-143%2C150-172 and 215-234;gbkey=misc_feature;gene=cdsA;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3580096	3580155	.	-	.	ID=id5799;Note=6 probable transmembrane helices predicted for YE3278 by TMHMM2.0 at aa 7-41%2C 56-75%2C 87-106%2C 121-143%2C150-172 and 215-234;gbkey=misc_feature;gene=cdsA;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	3580807	3581565	.	-	.	ID=gene3231;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;gene_synonym=rth;locus_tag=YE3279
AM286415.1	EMBL	CDS	3580807	3581565	.	-	0	ID=cds3139;Parent=gene3231;Dbxref=EnsemblGenomes-Gn:YE3279,EnsemblGenomes-Tr:CAL13309,GOA:A1JP77,InterPro:IPR001441,InterPro:IPR018520,UniProtKB/TrEMBL:A1JP77,NCBI_GP:CAL13309.1;Name=CAL13309.1;gbkey=CDS;gene=uppS;product=undecaprenyl pyrophosphate synthetase;protein_id=CAL13309.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3580837	3581502	.	-	.	ID=id5800;Note=Pfam match to entry PF01255 UPP_synthetase%2CPutative undecaprenyl diphosphate synthase%2C score 459.4%2CE-value 2e-135;gbkey=misc_feature;gene=uppS;inference=protein motif:PFAM:PF01255
AM286415.1	EMBL	sequence_feature	3580951	3581004	.	-	.	ID=id5801;Note=PS01066 Undecaprenyl pyrophosphate synthetase family signature.;gbkey=misc_feature;gene=uppS;inference=protein motif:Prosite:PS01066
AM286415.1	EMBL	gene	3581791	3582987	.	-	.	ID=gene3232;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;gene_synonym=b0173;locus_tag=YE3280
AM286415.1	EMBL	CDS	3581791	3582987	.	-	0	ID=cds3140;Parent=gene3232;Dbxref=EnsemblGenomes-Gn:YE3280,EnsemblGenomes-Tr:CAL13310,GOA:A1JP78,InterPro:IPR003821,InterPro:IPR013512,InterPro:IPR013644,InterPro:IPR016040,InterPro:IPR026877,NCBI_GP:CAL13310.1;Name=CAL13310.1;gbkey=CDS;gene=dxr;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=CAL13310.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3581821	3582978	.	-	.	ID=id5802;Note=Pfam match to entry PF02670 DXP_reductoisom%2C1-deoxy-D-xylulose 5-phosphate reductoisomerase%2C score 765.3%2C E-value 1.6e-227;gbkey=misc_feature;gene=dxr;inference=protein motif:PFAM:PF02670
AM286415.1	EMBL	gene	3583299	3583856	.	-	.	ID=gene3233;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;gene_synonym=b0172,rrf;locus_tag=YE3281
AM286415.1	EMBL	CDS	3583299	3583856	.	-	0	ID=cds3141;Parent=gene3233;Dbxref=EnsemblGenomes-Gn:YE3281,EnsemblGenomes-Tr:CAL13311,GOA:A1JP79,InterPro:IPR002661,InterPro:IPR023584,NCBI_GP:CAL13311.1;Name=CAL13311.1;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=CAL13311.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3583308	3583802	.	-	.	ID=id5803;Note=Pfam match to entry PF01765 RRF%2C Ribosome recycling factor%2C score 330.7%2C E-value 1.1e-96;gbkey=misc_feature;gene=frr;inference=protein motif:PFAM:PF01765
AM286415.1	EMBL	gene	3583989	3584735	.	-	.	ID=gene3234;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;gene_synonym=smbA;locus_tag=YE3282
AM286415.1	EMBL	CDS	3583989	3584735	.	-	0	ID=cds3142;Parent=gene3234;Dbxref=EnsemblGenomes-Gn:YE3282,EnsemblGenomes-Tr:CAL13312,GOA:A1JP80,InterPro:IPR001048,InterPro:IPR011817,InterPro:IPR015963,NCBI_GP:CAL13312.1;Name=CAL13312.1;gbkey=CDS;gene=pyrH;product=uridylate kinase;protein_id=CAL13312.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3584079	3584708	.	-	.	ID=id5804;Note=Pfam match to entry PF00696 aakinase%2C Amino acid kinase family%2C score 223.8%2C E-value 1.7e-64;gbkey=misc_feature;gene=pyrH;inference=protein motif:PFAM:PF00696
AM286415.1	EMBL	gene	3585002	3585859	.	-	.	ID=gene3235;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=YE3283
AM286415.1	EMBL	CDS	3585002	3585859	.	-	0	ID=cds3143;Parent=gene3235;Dbxref=EnsemblGenomes-Gn:YE3283,EnsemblGenomes-Tr:CAL13313,GOA:A1JP81,InterPro:IPR000449,InterPro:IPR001816,InterPro:IPR009060,InterPro:IPR014039,InterPro:IPR018101,NCBI_GP:CAL13313.1;Name=CAL13313.1;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=CAL13313.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3585065	3585691	.	-	.	ID=id5805;Note=Pfam match to entry PF00889 EF_TS%2C Elongation factor TS%2C score 367.1%2C E-value 1.2e-107;gbkey=misc_feature;gene=tsf;inference=protein motif:PFAM:PF00889
AM286415.1	EMBL	sequence_feature	3585599	3585631	.	-	.	ID=id5806;Note=PS01127 Elongation factor Ts signature 2.;gbkey=misc_feature;gene=tsf;inference=protein motif:Prosite:PS01127
AM286415.1	EMBL	sequence_feature	3585728	3585850	.	-	.	ID=id5807;Note=Pfam match to entry PF00627 UBA%2C UBA/TS-N domain %2Cscore 43.7%2C E-value 2.7e-10;gbkey=misc_feature;gene=tsf;inference=protein motif:PFAM:PF00627
AM286415.1	EMBL	gene	3585988	3586713	.	-	.	ID=gene3236;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=YE3284
AM286415.1	EMBL	CDS	3585988	3586713	.	-	0	ID=cds3144;Parent=gene3236;Dbxref=EnsemblGenomes-Gn:YE3284,EnsemblGenomes-Tr:CAL13314,GOA:A1JP82,InterPro:IPR001865,InterPro:IPR005706,InterPro:IPR018130,InterPro:IPR023591,NCBI_GP:CAL13314.1;Name=CAL13314.1;gbkey=CDS;gene=rpsB;product=30S ribosomal protein S2;protein_id=CAL13314.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3586039	3586689	.	-	.	ID=id5808;Note=Pfam match to entry PF00318 Ribosomal_S2%2C Ribosomal protein S2%2C score 439.5%2C E-value 1.9e-129;gbkey=misc_feature;gene=rpsB;inference=protein motif:PFAM:PF00318
AM286415.1	EMBL	sequence_feature	3586168	3586242	.	-	.	ID=id5809;Note=PS00963 Ribosomal protein S2 signature 2.;gbkey=misc_feature;gene=rpsB;inference=protein motif:Prosite:PS00963
AM286415.1	EMBL	sequence_feature	3586663	3586698	.	-	.	ID=id5810;Note=PS00962 Ribosomal protein S2 signature 1.;gbkey=misc_feature;gene=rpsB;inference=protein motif:Prosite:PS00962
AM286415.1	EMBL	transcript	3586741	3586915	.	-	.	ID=rna120;Note=t44 RNA (RF00127) as predicted by Rfam%2C score 60.42%2C positions 1 to 140;gbkey=misc_RNA
AM286415.1	EMBL	exon	3586741	3586915	.	-	.	ID=id5811;Parent=rna120;Note=t44 RNA (RF00127) as predicted by Rfam%2C score 60.42%2C positions 1 to 140;gbkey=misc_RNA
AM286415.1	EMBL	gene	3587074	3588033	.	+	.	ID=gene3237;Name=ampM;gbkey=Gene;gene=ampM;gene_biotype=protein_coding;gene_synonym=b0168,map;locus_tag=YE3285
AM286415.1	EMBL	CDS	3587074	3588033	.	+	0	ID=cds3145;Parent=gene3237;Dbxref=EnsemblGenomes-Gn:YE3285,EnsemblGenomes-Tr:CAL13315,GOA:A1JP83,InterPro:IPR000994,InterPro:IPR001714,InterPro:IPR002467,UniProtKB/TrEMBL:A1JP83,NCBI_GP:CAL13315.1;Name=CAL13315.1;gbkey=CDS;gene=ampM;product=methionine aminopeptidase;protein_id=CAL13315.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3587251	3587979	.	+	.	ID=id5812;Note=Pfam match to entry PF00557 Peptidase_M24%2Cmetallopeptidase family M24%2C score 339.0%2C E-value 3.5e-99;gbkey=misc_feature;gene=ampM;inference=protein motif:PFAM:PF00557
AM286415.1	EMBL	sequence_feature	3587386	3587418	.	+	.	ID=id5813;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ampM;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3587743	3587799	.	+	.	ID=id5814;Note=PS00680 Methionine aminopeptidase subfamily 1 signature.;gbkey=misc_feature;gene=ampM;inference=protein motif:Prosite:PS00680
AM286415.1	EMBL	gene	3588094	3590772	.	+	.	ID=gene3238;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=YE3286
AM286415.1	EMBL	CDS	3588094	3590772	.	+	0	ID=cds3146;Parent=gene3238;Dbxref=EnsemblGenomes-Gn:YE3286,EnsemblGenomes-Tr:CAL13316,GOA:A1JP85,InterPro:IPR002912,InterPro:IPR002934,InterPro:IPR003607,InterPro:IPR006674,InterPro:IPR010043,InterPro:IPR013546,NCBI_GP:CAL13316.1;Name=CAL13316.1;gbkey=CDS;gene=glnD;product=[protein-PII] uridylyltransferase;protein_id=CAL13316.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3588289	3588606	.	+	.	ID=id5815;Note=Pfam match to entry PF01909 NTP_transf_2%2CNucleotidyltransferase domain%2C score 53.9%2C E-value 2.3e-13;gbkey=misc_feature;gene=glnD;inference=protein motif:PFAM:PF01909
AM286415.1	EMBL	sequence_feature	3589501	3589905	.	+	.	ID=id5816;Note=Pfam match to entry PF01966 HD%2C HD domain%2C score 80.2%2C E-value 2.8e-21;gbkey=misc_feature;gene=glnD;inference=protein motif:PFAM:PF01966
AM286415.1	EMBL	sequence_feature	3590221	3590463	.	+	.	ID=id5817;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 24.3%2C E-value 0.00018;gbkey=misc_feature;gene=glnD;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	sequence_feature	3590542	3590766	.	+	.	ID=id5818;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 35.5%2C E-value 7.7e-08;gbkey=misc_feature;gene=glnD;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	gene	3590890	3591714	.	+	.	ID=gene3239;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=YE3287
AM286415.1	EMBL	CDS	3590890	3591714	.	+	0	ID=cds3147;Parent=gene3239;Dbxref=EnsemblGenomes-Gn:YE3287,EnsemblGenomes-Tr:CAL13317,GOA:A1JP86,InterPro:IPR001451,InterPro:IPR005664,InterPro:IPR011004,InterPro:IPR018357,InterPro:IPR023180,NCBI_GP:CAL13317.1;Name=CAL13317.1;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate N-succinyltransferase;protein_id=CAL13317.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3591211	3591264	.	+	.	ID=id5819;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 3.3%2CE-value 18;gbkey=misc_feature;gene=dapD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3591280	3591333	.	+	.	ID=id5820;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 5.5%2CE-value 9.4;gbkey=misc_feature;gene=dapD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3591289	3591375	.	+	.	ID=id5821;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;gbkey=misc_feature;gene=dapD;inference=protein motif:Prosite:PS00101
AM286415.1	EMBL	sequence_feature	3591334	3591387	.	+	.	ID=id5822;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 13.3%2CE-value 0.39;gbkey=misc_feature;gene=dapD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3591430	3591483	.	+	.	ID=id5823;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 10.6%2CE-value 2.1;gbkey=misc_feature;gene=dapD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	3591484	3591537	.	+	.	ID=id5824;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 11.3%2CE-value 1.5;gbkey=misc_feature;gene=dapD;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	gene	3591834	3592223	.	+	.	ID=gene3240;Name=YE3288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3288
AM286415.1	EMBL	CDS	3591834	3592223	.	+	0	ID=cds3148;Parent=gene3240;Dbxref=EnsemblGenomes-Gn:YE3288,EnsemblGenomes-Tr:CAL13318,InterPro:IPR020911,NCBI_GP:CAL13318.1;Name=CAL13318.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13318.1;transl_table=11
AM286415.1	EMBL	gene	3592375	3592824	.	-	.	ID=gene3241;Name=YE3289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3289
AM286415.1	EMBL	CDS	3592375	3592824	.	-	0	ID=cds3149;Parent=gene3241;Dbxref=EnsemblGenomes-Gn:YE3289,EnsemblGenomes-Tr:CAL13319,GOA:A1JP88,InterPro:IPR001094,InterPro:IPR008254,InterPro:IPR029039,UniProtKB/TrEMBL:A1JP88,NCBI_GP:CAL13319.1;Name=CAL13319.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13319.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3592381	3592818	.	-	.	ID=id5825;Note=Pfam match to entry PF00258 flavodoxin%2C Flavodoxin%2C score 110.2%2C E-value 2.6e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF00258
AM286415.1	EMBL	gene	3592852	3593625	.	-	.	ID=gene3242;Name=YE3290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3290
AM286415.1	EMBL	CDS	3592852	3593625	.	-	0	ID=cds3150;Parent=gene3242;Dbxref=EnsemblGenomes-Gn:YE3290,EnsemblGenomes-Tr:CAL13320,GOA:A1JP89,InterPro:IPR006145,InterPro:IPR006224,InterPro:IPR020103,UniProtKB/TrEMBL:A1JP89,NCBI_GP:CAL13320.1;Name=CAL13320.1;gbkey=CDS;product=Conserved hypothetical protein;protein_id=CAL13320.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3593116	3593598	.	-	.	ID=id5826;Note=Pfam match to entry PF00849 PseudoU_synth_2%2C RNA pseudouridylate synthase%2C score 177.8%2C E-value 1.2e-50;gbkey=misc_feature;inference=protein motif:PFAM:PF00849
AM286415.1	EMBL	sequence_feature	3593434	3593478	.	-	.	ID=id5827;Note=PS01129 Rlu family of pseudouridine synthase signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01129
AM286415.1	EMBL	gene	3593625	3593957	.	-	.	ID=gene3243;Name=YE3291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3291
AM286415.1	EMBL	CDS	3593625	3593957	.	-	0	ID=cds3151;Parent=gene3243;Dbxref=EnsemblGenomes-Gn:YE3291,EnsemblGenomes-Tr:CAL13321,InterPro:IPR007384,InterPro:IPR023376,UniProtKB/TrEMBL:A1JP90,NCBI_GP:CAL13321.1;Name=CAL13321.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13321.1;transl_table=11
AM286415.1	EMBL	repeat_region	3594082	3595384	.	-	.	ID=id5828;Note=Insertion sequence element IS1669;gbkey=repeat_region
AM286415.1	EMBL	gene	3594117	3594914	.	-	.	ID=gene3244;Name=YE3292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3292
AM286415.1	EMBL	CDS	3594117	3594914	.	-	0	ID=cds3152;Parent=gene3244;Dbxref=EnsemblGenomes-Gn:YE3292,EnsemblGenomes-Tr:CAL13322,GOA:A1JIJ9,InterPro:IPR001584,InterPro:IPR012337,UniProtKB/TrEMBL:A1JIJ9,NCBI_GP:CAL13322.1;Name=CAL13322.1;Note=Similar to Shigella sonnei insertion element IS600 hypothetical protein SWALL:YIS2_SHISO (SWALL:P16940) (272 aa) fasta scores: E(): 5.9e-25%2C 37.4 38d in 270 aa%2CPseudomonas aeruginosa hypothetical protein Pa0257 SWALL:Q9I6N2 (EMBL:AE004463) (263 aa) fasta scores: E(): 8.6e-70%2C 66.16 38d in 263 aa and to Porphyromonas gingivalis transposase Orf2 SWALL:Q9L796 (EMBL:AF224744) (312 aa) fasta scores: E(): 9.8e-27%2C 37.26 38d in 271 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P16940;product=putative transposase for insertion element IS1669;protein_id=CAL13322.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3594126	3594602	.	-	.	ID=id5829;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 121.4%2C E-value 1.1e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	3594932	3595246	.	-	.	ID=gene3245;Name=YE3293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3293
AM286415.1	EMBL	CDS	3594932	3595246	.	-	0	ID=cds3153;Parent=gene3245;Dbxref=EnsemblGenomes-Gn:YE3293,EnsemblGenomes-Tr:CAL13323,GOA:A1JIJ8,InterPro:IPR009057,UniProtKB/TrEMBL:A1JIJ8,NCBI_GP:CAL13323.1;Name=CAL13323.1;Note=Similar to Yersinia pestis hypothetical protein Ypo2009A SWALL:Q8ZEY6 (EMBL:AJ414151) (104 aa) fasta scores: E(): 7e-31%2C 87.5 38d in 104 aa and in part to Salmonella typhimurium putative cytoplasmic protein Stm0948 SWALL:Q8ZQE1 (EMBL:AE008740) (133 aa) fasta scores: E(): 3.9e-16%2C 53 38d in 100 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=IS1669 hypothetical protein;protein_id=CAL13323.1;transl_table=11
AM286415.1	EMBL	gene	3595392	3595708	.	-	.	ID=gene3246;Name=csrB;gbkey=Gene;gene=csrB;gene_biotype=misc_RNA
AM286415.1	EMBL	transcript	3595392	3595708	.	-	.	ID=rna121;Parent=gene3246;Note=CsrB/RsmB family RNA (RF00018) as predicted by Rfam%2C score 127.06%2C positions 21 to 355;gbkey=misc_RNA;gene=csrB
AM286415.1	EMBL	exon	3595392	3595708	.	-	.	ID=id5830;Parent=rna121;Note=CsrB/RsmB family RNA (RF00018) as predicted by Rfam%2C score 127.06%2C positions 21 to 355;gbkey=misc_RNA;gene=csrB
AM286415.1	EMBL	gene	3595938	3596489	.	-	.	ID=gene3247;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=YE3294
AM286415.1	EMBL	CDS	3595938	3596489	.	-	0	ID=cds3154;Parent=gene3247;Dbxref=EnsemblGenomes-Gn:YE3294,EnsemblGenomes-Tr:CAL13324,GOA:A1JP93,InterPro:IPR009948,NCBI_GP:CAL13324.1;Name=CAL13324.1;Note=Similar to Escherichia coli Syd protein known to interact with SecE%2C or Ydr or b2793 SWALL:SYDP_ECOLI (SWALL:P43526) (181 aa) fasta scores: E(): 3.2e-41%2C 59.11 id in 181 aa%2C and to Yersinia pestis KIM SyD protein Syd SWALL:AAM86696 (EMBL:AE013915) (183 aa) fasta scores: E(): 6.3e-63%2C 85.24 38d in 183 aa;gbkey=CDS;gene=syd;inference=similar to sequence:UniProtKB:P43526;product=Syd protein;protein_id=CAL13324.1;transl_table=11
AM286415.1	EMBL	gene	3596621	3597466	.	+	.	ID=gene3248;Name=YE3295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3295
AM286415.1	EMBL	CDS	3596621	3597466	.	+	0	ID=cds3155;Parent=gene3248;Dbxref=EnsemblGenomes-Gn:YE3295,EnsemblGenomes-Tr:CAL13325,GOA:A1JP94,InterPro:IPR016428,InterPro:IPR029139,InterPro:IPR029500,NCBI_GP:CAL13325.1;Name=CAL13325.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13325.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3597152	3597457	.	+	.	ID=id5831;Note=Pfam match to entry PF01227 GTP_cyclohydroI%2C GTP cyclohydrolase I%2C score 9.1%2C E-value 1.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01227
AM286415.1	EMBL	gene	3597680	3599044	.	+	.	ID=gene3249;Name=YE3296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3296
AM286415.1	EMBL	CDS	3597680	3599044	.	+	0	ID=cds3156;Parent=gene3249;Dbxref=EnsemblGenomes-Gn:YE3296,EnsemblGenomes-Tr:CAL13326,InterPro:IPR005269,InterPro:IPR021826,InterPro:IPR027820,UniProtKB/TrEMBL:A1JP95,NCBI_GP:CAL13326.1;Name=CAL13326.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13326.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3598247	3598675	.	+	.	ID=id5832;Note=Pfam match to entry PF03641 Lysine_decarbox%2C Lysine decarboxylase family%2C score 179.8%2C E-value 2.9e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF03641
AM286415.1	EMBL	gene	3599192	3599947	.	+	.	ID=gene3250;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;gene_synonym=exo;locus_tag=YE3297
AM286415.1	EMBL	CDS	3599192	3599947	.	+	0	ID=cds3157;Parent=gene3250;Dbxref=EnsemblGenomes-Gn:YE3297,EnsemblGenomes-Tr:CAL13327,GOA:A1JP96,InterPro:IPR002421,InterPro:IPR008918,InterPro:IPR020045,InterPro:IPR020046,InterPro:IPR022895,InterPro:IPR029060,NCBI_GP:CAL13327.1;Name=CAL13327.1;gbkey=CDS;gene=xni;product=exodeoxyribonuclease IX;protein_id=CAL13327.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3599198	3599665	.	+	.	ID=id5833;Note=Pfam match to entry PF02739 5_3_exonuc_N%2C 5'-3' exonuclease%2C N-terminal resolvase-like domain%2C score 63.6%2C E-value 2.8e-16;gbkey=misc_feature;gene=xni;inference=protein motif:PFAM:PF02739
AM286415.1	EMBL	sequence_feature	3599669	3599944	.	+	.	ID=id5834;Note=Pfam match to entry PF01367 5_3_exonuclease%2C 5'-3' exonuclease%2C C-terminal SAM fold%2C score 91.9%2C E-value 8.6e-25;gbkey=misc_feature;gene=xni;inference=protein motif:PFAM:PF01367
AM286415.1	EMBL	gene	3600175	3601281	.	-	.	ID=gene3251;Name=YE3298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3298
AM286415.1	EMBL	CDS	3600175	3601281	.	-	0	ID=cds3158;Parent=gene3251;Dbxref=EnsemblGenomes-Gn:YE3298,EnsemblGenomes-Tr:CAL13328,GOA:A1JPA5,InterPro:IPR002877,InterPro:IPR011224,InterPro:IPR029063,NCBI_GP:CAL13328.1;Name=CAL13328.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13328.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3600808	3600840	.	-	.	ID=id5835;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3601274	3601669	.	-	.	ID=gene3252;Name=YE3299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3299
AM286415.1	EMBL	CDS	3601274	3601669	.	-	0	ID=cds3159;Parent=gene3252;Dbxref=EnsemblGenomes-Gn:YE3299,EnsemblGenomes-Tr:CAL13329,InterPro:IPR006696,UniProtKB/TrEMBL:A1JPA6,NCBI_GP:CAL13329.1;Name=CAL13329.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13329.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3601589	3601657	.	-	.	ID=id5836;Note=4 probable transmembrane helices predicted for YE3299 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88 and 98-120;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3601493	3601561	.	-	.	ID=id5836;Note=4 probable transmembrane helices predicted for YE3299 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88 and 98-120;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3601406	3601474	.	-	.	ID=id5836;Note=4 probable transmembrane helices predicted for YE3299 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88 and 98-120;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3601310	3601378	.	-	.	ID=id5836;Note=4 probable transmembrane helices predicted for YE3299 by TMHMM2.0 at aa 5-27%2C 37-59%2C 66-88 and 98-120;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	3601709	3602626	.	-	.	ID=gene3253;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=YE3300
AM286415.1	EMBL	CDS	3601709	3602626	.	-	0	ID=cds3160;Parent=gene3253;Dbxref=EnsemblGenomes-Gn:YE3300,EnsemblGenomes-Tr:CAL13330,GOA:A1JPA7,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JPA7,NCBI_GP:CAL13330.1;Name=CAL13330.1;gbkey=CDS;gene=gcvA;product=glycine cleavage system transcriptional activator;protein_id=CAL13330.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3601748	3602362	.	-	.	ID=id5837;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 154.2%2C E-value 1.4e-43;gbkey=misc_feature;gene=gcvA;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	3602426	3602605	.	-	.	ID=id5838;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 104.6%2C E-value 1.2e-28;gbkey=misc_feature;gene=gcvA;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	3602471	3602563	.	-	.	ID=id5839;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=gcvA;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	transcript	3602754	3602859	.	+	.	ID=rna122;Note=GcvB RNA (RF00022) as predicted by Rfam%2C score 43.07%2C positions 1 to 113;gbkey=misc_RNA
AM286415.1	EMBL	exon	3602754	3602859	.	+	.	ID=id5840;Parent=rna122;Note=GcvB RNA (RF00022) as predicted by Rfam%2C score 43.07%2C positions 1 to 113;gbkey=misc_RNA
AM286415.1	EMBL	gene	3603108	3603329	.	-	.	ID=gene3254;Name=YE3302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3302
AM286415.1	EMBL	CDS	3603108	3603329	.	-	0	ID=cds3161;Parent=gene3254;Dbxref=EnsemblGenomes-Gn:YE3302,EnsemblGenomes-Tr:CAL13331,InterPro:IPR010305,InterPro:IPR010920,UniProtKB/TrEMBL:A1JPA8,NCBI_GP:CAL13331.1;Name=CAL13331.1;Note=Similar to Escherichia coli hypothetical lipoprotein YgdI precursor%2C or b2809 SWALL:YGDI_ECOLI (SWALL:Q46924) (75 aa) fasta scores: E(): 2.8e-19%2C 77.77 id in 72 aa%2Cand to Salmonella typhi possible lipoprotein Sty3150 SWALL:Q8Z409 (EMBL:AL627277) (72 aa) fasta scores: E(): 3.2e-14%2C 60.56 38d in 71 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q46924;product=lipoprotein;protein_id=CAL13331.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3603252	3603320	.	-	.	ID=id5841;Note=1 probable transmembrane helix predicted for YE3302 by TMHMM2.0 at aa 31-53;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3603270	3603302	.	-	.	ID=id5842;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3603470	3604717	.	+	.	ID=gene3255;Name=YE3303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3303
AM286415.1	EMBL	CDS	3603470	3604717	.	+	0	ID=cds3162;Parent=gene3255;Dbxref=EnsemblGenomes-Gn:YE3303,EnsemblGenomes-Tr:CAL13332,GOA:A1JPA9,InterPro:IPR000192,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR020578,InterPro:IPR022471,UniProtKB/TrEMBL:A1JPA9,NCBI_GP:CAL13332.1;Name=CAL13332.1;gbkey=CDS;product=putative aminotransferase class V;protein_id=CAL13332.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3603479	3603535	.	+	.	ID=id5843;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00179
AM286415.1	EMBL	sequence_feature	3603599	3604675	.	+	.	ID=id5844;Note=Pfam match to entry PF00266 aminotran_5%2CAminotransferase class-V%2C score 27.3%2C E-value 7.4e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00266
AM286415.1	EMBL	sequence_feature	3604148	3604207	.	+	.	ID=id5845;Note=PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00595
AM286415.1	EMBL	gene	3604737	3605177	.	+	.	ID=gene3256;Name=YE3304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3304
AM286415.1	EMBL	CDS	3604737	3605177	.	+	0	ID=cds3163;Parent=gene3256;Dbxref=EnsemblGenomes-Gn:YE3304,EnsemblGenomes-Tr:CAL13333,InterPro:IPR003808,InterPro:IPR017763,UniProtKB/TrEMBL:A1JPB1,NCBI_GP:CAL13333.1;Name=CAL13333.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13333.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3604785	3605162	.	+	.	ID=id5846;Note=Pfam match to entry PF02657 UPF0050%2C Domain of unknown function DUF%2C score 184.5%2C E-value 1.1e-52;gbkey=misc_feature;inference=protein motif:PFAM:PF02657
AM286415.1	EMBL	gene	3605181	3605990	.	-	.	ID=gene3257;Name=YE3305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3305
AM286415.1	EMBL	CDS	3605181	3605990	.	-	0	ID=cds3164;Parent=gene3257;Dbxref=EnsemblGenomes-Gn:YE3305,EnsemblGenomes-Tr:CAL13334,GOA:A1JPB2,InterPro:IPR000594,InterPro:IPR009036,InterPro:IPR016040,UniProtKB/TrEMBL:A1JPB2,NCBI_GP:CAL13334.1;Name=CAL13334.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13334.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3605220	3605288	.	-	.	ID=id5847;Note=1 probable transmembrane helix predicted for YE3305 by TMHMM2.0 at aa 235-257;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3605499	3605906	.	-	.	ID=id5848;Note=Pfam match to entry PF00899 ThiF%2C ThiF family %2Cscore 187.2%2C E-value 1.7e-53;gbkey=misc_feature;inference=protein motif:PFAM:PF00899
AM286415.1	EMBL	gene	3606105	3607277	.	-	.	ID=gene3258;Name=YE3306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3306
AM286415.1	EMBL	CDS	3606105	3607277	.	-	0	ID=cds3165;Parent=gene3258;Dbxref=EnsemblGenomes-Gn:YE3306,EnsemblGenomes-Tr:CAL13335,GOA:A1JPB3,InterPro:IPR005300,InterPro:IPR009009,InterPro:IPR010611,InterPro:IPR014733,InterPro:IPR026044,UniProtKB/TrEMBL:A1JPB3,NCBI_GP:CAL13335.1;Name=CAL13335.1;gbkey=CDS;product=membrane-bound lytic murein transglycosylase A precursor;protein_id=CAL13335.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3606210	3607016	.	-	.	ID=id5849;Note=Pfam match to entry PF03562 MltA%2C MltA family %2Cscore 531.7%2C E-value 3.4e-157;gbkey=misc_feature;inference=protein motif:PFAM:PF03562
AM286415.1	EMBL	sequence_feature	3607215	3607247	.	-	.	ID=id5850;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3607498	3607574	.	+	.	ID=gene3259;Name=tRNA-Met (CAT);gbkey=Gene;gene=tRNA-Met (CAT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3607498	3607574	.	+	.	ID=rna123;Parent=gene3259;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	exon	3607498	3607574	.	+	.	ID=id5851;Parent=rna123;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	gene	3607677	3607753	.	+	.	ID=gene3260;Name=tRNA-Met (CAT);gbkey=Gene;gene=tRNA-Met (CAT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3607677	3607753	.	+	.	ID=rna124;Parent=gene3260;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	exon	3607677	3607753	.	+	.	ID=id5852;Parent=rna124;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	gene	3607805	3607881	.	+	.	ID=gene3261;Name=tRNA-Met (CAT);gbkey=Gene;gene=tRNA-Met (CAT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3607805	3607881	.	+	.	ID=rna125;Parent=gene3261;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	exon	3607805	3607881	.	+	.	ID=id5853;Parent=rna125;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	gene	3608095	3609345	.	-	.	ID=gene3262;Name=YE3307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3307
AM286415.1	EMBL	CDS	3608095	3609345	.	-	0	ID=cds3166;Parent=gene3262;Dbxref=EnsemblGenomes-Gn:YE3307,EnsemblGenomes-Tr:CAL13336,GOA:A1JPB5,InterPro:IPR002508,InterPro:IPR021731,UniProtKB/TrEMBL:A1JPB5,NCBI_GP:CAL13336.1;Name=CAL13336.1;gbkey=CDS;product=N-acetylmuramoyl-L-alanine amidase AmiC precursor;protein_id=CAL13336.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3608122	3608598	.	-	.	ID=id5854;Note=Pfam match to entry PF01520 Amidase_3%2CN-acetylmuramoyl-L-alanine amidase%2C score 239.9%2C E-value 2.4e-69;gbkey=misc_feature;inference=protein motif:PFAM:PF01520
AM286415.1	EMBL	gene	3609580	3610905	.	+	.	ID=gene3263;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=YE3308
AM286415.1	EMBL	CDS	3609580	3610905	.	+	0	ID=cds3167;Parent=gene3263;Dbxref=EnsemblGenomes-Gn:YE3308,EnsemblGenomes-Tr:CAL13337,GOA:A1JPB6,InterPro:IPR000182,InterPro:IPR001048,InterPro:IPR010167,InterPro:IPR016181,NCBI_GP:CAL13337.1;Name=CAL13337.1;gbkey=CDS;gene=argA;product=amino-acid acetyltransferase;protein_id=CAL13337.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3609652	3610383	.	+	.	ID=id5855;Note=Pfam match to entry PF00696 aakinase%2C Amino acid kinase family%2C score 119.8%2C E-value 3.3e-33;gbkey=misc_feature;gene=argA;inference=protein motif:PFAM:PF00696
AM286415.1	EMBL	sequence_feature	3610588	3610818	.	+	.	ID=id5856;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 49.4%2C E-value 5.3e-12;gbkey=misc_feature;gene=argA;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	3610936	3612837	.	-	.	ID=gene3264;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=YE3309
AM286415.1	EMBL	CDS	3610936	3612837	.	-	0	ID=cds3168;Parent=gene3264;Dbxref=EnsemblGenomes-Gn:YE3309,EnsemblGenomes-Tr:CAL13338,GOA:A1JPB7,InterPro:IPR003593,InterPro:IPR006344,InterPro:IPR027417,InterPro:IPR027785,UniProtKB/TrEMBL:A1JPB7,NCBI_GP:CAL13338.1;Name=CAL13338.1;gbkey=CDS;gene=recD;product=exodeoxyribonuclease V alpha chain;protein_id=CAL13338.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3611020	3611160	.	-	.	ID=id5857;Note=Pfam match to entry PF01443 Viral_helicase1%2C Viral (Superfamily 1) RNA helicase%2C score 32.8%2C E-value 5.2e-10;gbkey=misc_feature;gene=recD;inference=protein motif:PFAM:PF01443
AM286415.1	EMBL	sequence_feature	3612253	3612276	.	-	.	ID=id5858;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=recD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3612834	3616463	.	-	.	ID=gene3265;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;gene_synonym=rorA;locus_tag=YE3310
AM286415.1	EMBL	CDS	3612834	3616463	.	-	0	ID=cds3169;Parent=gene3265;Dbxref=EnsemblGenomes-Gn:YE3310,EnsemblGenomes-Tr:CAL13339,GOA:A1JPB9,InterPro:IPR000212,InterPro:IPR004586,InterPro:IPR011335,InterPro:IPR011604,InterPro:IPR014016,InterPro:IPR014017,InterPro:IPR027417,UniProtKB/TrEMBL:A1JPB9,NCBI_GP:CAL13339.1;Name=CAL13339.1;gbkey=CDS;gene=recB;product=exodeoxyribonuclease V beta chain;protein_id=CAL13339.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3614340	3616454	.	-	.	ID=id5859;Note=Pfam match to entry PF00580 UvrD-helicase%2C UvrD/REP helicase%2C score 377.5%2C E-value 8.7e-111;gbkey=misc_feature;gene=recB;inference=protein motif:PFAM:PF00580
AM286415.1	EMBL	sequence_feature	3616371	3616394	.	-	.	ID=id5860;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=recB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3616460	3619351	.	-	.	ID=gene3266;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;gene_synonym=ptr;locus_tag=YE3311
AM286415.1	EMBL	CDS	3616460	3619351	.	-	0	ID=cds3170;Parent=gene3266;Dbxref=EnsemblGenomes-Gn:YE3311,EnsemblGenomes-Tr:CAL13340,GOA:A1JPC0,InterPro:IPR001431,InterPro:IPR007863,InterPro:IPR011237,InterPro:IPR011249,InterPro:IPR011765,UniProtKB/TrEMBL:A1JPC0,NCBI_GP:CAL13340.1;Name=CAL13340.1;gbkey=CDS;gene=ptrA;product=protease III precursor;protein_id=CAL13340.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3618770	3619189	.	-	.	ID=id5861;Note=Pfam match to entry PF00675 Peptidase_M16%2CInsulinase (Peptidase family M16)%2C score 168.9%2C E-value 5.6e-48;gbkey=misc_feature;gene=ptrA;inference=protein motif:PFAM:PF00675
AM286415.1	EMBL	sequence_feature	3619052	3619123	.	-	.	ID=id5862;Note=PS00143 Insulinase family%2C zinc-binding region signature.;gbkey=misc_feature;gene=ptrA;inference=protein motif:Prosite:PS00143
AM286415.1	EMBL	sequence_feature	3619280	3619339	.	-	.	ID=id5863;Note=1 probable transmembrane helix predicted for YE3311 by TMHMM2.0 at aa 5-24;gbkey=misc_feature;gene=ptrA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3619451	3622822	.	-	.	ID=gene3267;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=YE3312
AM286415.1	EMBL	CDS	3619451	3622822	.	-	0	ID=cds3171;Parent=gene3267;Dbxref=EnsemblGenomes-Gn:YE3312,EnsemblGenomes-Tr:CAL13341,GOA:A1JPC2,InterPro:IPR006697,InterPro:IPR011335,InterPro:IPR013986,InterPro:IPR027417,UniProtKB/TrEMBL:A1JPC2,NCBI_GP:CAL13341.1;Name=CAL13341.1;gbkey=CDS;gene=recC;product=exodeoxyribonuclease V gamma chain;protein_id=CAL13341.1;transl_table=11
AM286415.1	EMBL	gene	3622973	3623359	.	-	.	ID=gene3268;Name=YE3313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3313
AM286415.1	EMBL	CDS	3622973	3623359	.	-	0	ID=cds3172;Parent=gene3268;Dbxref=EnsemblGenomes-Gn:YE3313,EnsemblGenomes-Tr:CAL13342,InterPro:IPR012902,InterPro:IPR022204,UniProtKB/TrEMBL:A1JPC3,NCBI_GP:CAL13342.1;Name=CAL13342.1;Note=Similar to many including: Yersinia pestis KIM hypothetical protein Y3167 SWALL:AAM86717 (EMBL:AE013918) (136 aa) fasta scores: E(): 2.8e-23%2C 60.74 38d in 107 aa%2CYersinia pestis putative prepilin peptidase dependent protein Ypo1017 SWALL:Q8ZH91 (EMBL:AJ414146) (136 aa) fasta scores: E(): 2.8e-23%2C 60.74 38d in 107 aa and to Escherichia coli O157:H7 prepilin peptidase dependent protein c ppdc or z4140 or ecs3680 SWALL:Q8X6M6 (EMBL:AE005511) (107 aa) fasta scores: E(): 2.3%2C 26.41 38d in 106 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414146;product=conserved hypothetical protein;protein_id=CAL13342.1;transl_table=11
AM286415.1	EMBL	gene	3623350	3623817	.	-	.	ID=gene3269;Name=YE3314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3314
AM286415.1	EMBL	CDS	3623350	3623817	.	-	0	ID=cds3173;Parent=gene3269;Dbxref=EnsemblGenomes-Gn:YE3314,EnsemblGenomes-Tr:CAL13343,InterPro:IPR019652,UniProtKB/TrEMBL:A1JPC5,NCBI_GP:CAL13343.1;Name=CAL13343.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13343.1;transl_table=11
AM286415.1	EMBL	gene	3623814	3624365	.	-	.	ID=gene3270;Name=YE3315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3315
AM286415.1	EMBL	CDS	3623814	3624365	.	-	0	ID=cds3174;Parent=gene3270;Dbxref=EnsemblGenomes-Gn:YE3315,EnsemblGenomes-Tr:CAL13344,UniProtKB/TrEMBL:A1JPC6,NCBI_GP:CAL13344.1;Name=CAL13344.1;gbkey=CDS;product=putative prepilin peptidase dependent protein;protein_id=CAL13344.1;transl_table=11
AM286415.1	EMBL	gene	3624428	3624964	.	-	.	ID=gene3271;Name=YE3316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3316
AM286415.1	EMBL	CDS	3624428	3624964	.	-	0	ID=cds3175;Parent=gene3271;Dbxref=EnsemblGenomes-Gn:YE3316,EnsemblGenomes-Tr:CAL13345,InterPro:IPR012902,UniProtKB/TrEMBL:A1JPC7,NCBI_GP:CAL13345.1;Name=CAL13345.1;Note=Similar to many Salmonella typhimurium prepilin peptidase dependent protein A%2C putative component in type IV pilin biogenesis PpdA or Stm3000 SWALL:Q8ZMB0 (EMBL:AE008837) (156 aa) fasta scores: E(): 1.8e-15%2C34.16 38d in 161 aa%2C Escherichia coli prepilin peptidase dependent protein A precursor ppda or b2826 SWALL:PPDA_ECOLI (SWALL:P33554) (156 aa) fasta scores: E(): 3.7e-13%2C 32.02 38d in 153 aa and to Vibrio vulnificus type IV pilin PilA SWALL:Q8VVV3 (EMBL:AF439854) (147 aa) fasta scores: E(): 0.21%2C 27.69 38d in 65 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P33554;product=putative exported protein;protein_id=CAL13345.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3624830	3624898	.	-	.	ID=id5864;Note=1 probable transmembrane helix predicted for YE3316 by TMHMM2.0 at aa 23-45;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3624839	3624901	.	-	.	ID=id5865;Note=PS00409 Prokaryotic N-terminal methylation site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00409
AM286415.1	EMBL	gene	3625196	3625990	.	-	.	ID=gene3272;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=YE3317
AM286415.1	EMBL	CDS	3625196	3625990	.	-	0	ID=cds3176;Parent=gene3272;Dbxref=EnsemblGenomes-Gn:YE3317,EnsemblGenomes-Tr:CAL13346,GOA:A1JPC9,InterPro:IPR000398,InterPro:IPR020940,InterPro:IPR023451,NCBI_GP:CAL13346.1;Name=CAL13346.1;gbkey=CDS;gene=thyA;product=thymidylate synthase;protein_id=CAL13346.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3625199	3625990	.	-	.	ID=id5866;Note=Pfam match to entry PF00303 thymidylat_synt%2CThymidylate synthase%2C score 621.5%2C E-value 3e-184;gbkey=misc_feature;gene=thyA;inference=protein motif:PFAM:PF00303
AM286415.1	EMBL	sequence_feature	3625529	3625615	.	-	.	ID=id5867;Note=PS00091 Thymidylate synthase active site.;gbkey=misc_feature;gene=thyA;inference=protein motif:Prosite:PS00091
AM286415.1	EMBL	gene	3625997	3626869	.	-	.	ID=gene3273;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;gene_synonym=umpA;locus_tag=YE3318
AM286415.1	EMBL	CDS	3625997	3626869	.	-	0	ID=cds3177;Parent=gene3273;Dbxref=EnsemblGenomes-Gn:YE3318,EnsemblGenomes-Tr:CAL13347,GOA:A1JPD0,InterPro:IPR001640,NCBI_GP:CAL13347.1;Name=CAL13347.1;gbkey=CDS;gene=lgt;product=prolipoprotein diacylglyceryl transferase;protein_id=CAL13347.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3626018	3626842	.	-	.	ID=id5868;Note=Pfam match to entry PF01790 LGT%2C Prolipoprotein diacylglyceryl transferase%2C score 455.4%2C E-value 3.1e-134;gbkey=misc_feature;gene=lgt;inference=protein motif:PFAM:PF01790
AM286415.1	EMBL	sequence_feature	3626759	3626827	.	-	.	ID=id5869;Note=7 probable transmembrane helices predicted for YE3318 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-117%2C 124-146%2C200-219%2C 226-243 and 258-280;gbkey=misc_feature;gene=lgt;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	3626630	3626698	.	-	.	ID=id5869;Note=7 probable transmembrane helices predicted for YE3318 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-117%2C 124-146%2C200-219%2C 226-243 and 258-280;gbkey=misc_feature;gene=lgt;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	3626519	3626587	.	-	.	ID=id5869;Note=7 probable transmembrane helices predicted for YE3318 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-117%2C 124-146%2C200-219%2C 226-243 and 258-280;gbkey=misc_feature;gene=lgt;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	3626432	3626500	.	-	.	ID=id5869;Note=7 probable transmembrane helices predicted for YE3318 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-117%2C 124-146%2C200-219%2C 226-243 and 258-280;gbkey=misc_feature;gene=lgt;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	3626213	3626272	.	-	.	ID=id5869;Note=7 probable transmembrane helices predicted for YE3318 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-117%2C 124-146%2C200-219%2C 226-243 and 258-280;gbkey=misc_feature;gene=lgt;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	3626141	3626194	.	-	.	ID=id5869;Note=7 probable transmembrane helices predicted for YE3318 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-117%2C 124-146%2C200-219%2C 226-243 and 258-280;gbkey=misc_feature;gene=lgt;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	3626030	3626098	.	-	.	ID=id5869;Note=7 probable transmembrane helices predicted for YE3318 by TMHMM2.0 at aa 15-37%2C 58-80%2C 95-117%2C 124-146%2C200-219%2C 226-243 and 258-280;gbkey=misc_feature;gene=lgt;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	3626408	3626446	.	-	.	ID=id5870;Note=PS01311 Prolipoprotein diacylglyceryl transferase signature.;gbkey=misc_feature;gene=lgt;inference=protein motif:Prosite:PS01311
AM286415.1	EMBL	gene	3626997	3629243	.	-	.	ID=gene3274;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=YE3319
AM286415.1	EMBL	CDS	3626997	3629243	.	-	0	ID=cds3178;Parent=gene3274;Dbxref=EnsemblGenomes-Gn:YE3319,EnsemblGenomes-Tr:CAL13348,GOA:A1JPD2,InterPro:IPR000121,InterPro:IPR003018,InterPro:IPR006318,InterPro:IPR008279,InterPro:IPR008731,InterPro:IPR015813,InterPro:IPR018274,InterPro:IPR023151,InterPro:IPR029016,UniProtKB/TrEMBL:A1JPD2,NCBI_GP:CAL13348.1;Name=CAL13348.1;gbkey=CDS;gene=ptsP;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=CAL13348.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3627114	3627998	.	-	.	ID=id5871;Note=Pfam match to entry PF02896 PEP-utilizers_C%2CPEP-utilizing enzyme%2C TIM barrel domain%2C score 467.3%2CE-value 8.3e-138;gbkey=misc_feature;gene=ptsP;inference=protein motif:PFAM:PF02896
AM286415.1	EMBL	sequence_feature	3627351	3627407	.	-	.	ID=id5872;Note=PS00742 PEP-utilizing enzymes signature 2.;gbkey=misc_feature;gene=ptsP;inference=protein motif:Prosite:PS00742
AM286415.1	EMBL	sequence_feature	3628071	3628310	.	-	.	ID=id5873;Note=Pfam match to entry PF00391 PEP-utilizers%2CPEP-utilizing enzyme%2C mobile domain%2C score 75.9%2C E-value 5.4e-20;gbkey=misc_feature;gene=ptsP;inference=protein motif:PFAM:PF00391
AM286415.1	EMBL	sequence_feature	3628158	3628193	.	-	.	ID=id5874;Note=PS00370 PEP-utilizing enzymes phosphorylation site signature.;gbkey=misc_feature;gene=ptsP;inference=protein motif:Prosite:PS00370
AM286415.1	EMBL	sequence_feature	3628782	3629195	.	-	.	ID=id5875;Note=Pfam match to entry PF01590 GAF%2C GAF domain%2C score 108.1%2C E-value 1.1e-29;gbkey=misc_feature;gene=ptsP;inference=protein motif:PFAM:PF01590
AM286415.1	EMBL	gene	3629256	3629783	.	-	.	ID=gene3275;Name=YE3320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3320
AM286415.1	EMBL	CDS	3629256	3629783	.	-	0	ID=cds3179;Parent=gene3275;Dbxref=EnsemblGenomes-Gn:YE3320,EnsemblGenomes-Tr:CAL13349,GOA:A1JPE1,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,InterPro:IPR020476,InterPro:IPR022927,NCBI_GP:CAL13349.1;Name=CAL13349.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13349.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3629334	3629765	.	-	.	ID=id5876;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 108.2%2C E-value 1.1e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	sequence_feature	3629613	3629672	.	-	.	ID=id5877;Note=PS00893 mutT domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00893
AM286415.1	EMBL	gene	3629809	3630027	.	-	.	ID=gene3276;Name=YE3321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3321
AM286415.1	EMBL	CDS	3629809	3630027	.	-	0	ID=cds3180;Parent=gene3276;Dbxref=EnsemblGenomes-Gn:YE3321,EnsemblGenomes-Tr:CAL13350,UniProtKB/TrEMBL:A1JPE2,NCBI_GP:CAL13350.1;Name=CAL13350.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13350.1;transl_table=11
AM286415.1	EMBL	gene	3630481	3631167	.	+	.	ID=gene3277;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;gene_synonym=mutR,prv;locus_tag=YE3322
AM286415.1	EMBL	CDS	3630481	3631167	.	+	0	ID=cds3181;Parent=gene3277;Dbxref=EnsemblGenomes-Gn:YE3322,EnsemblGenomes-Tr:CAL13351,GOA:A1JPE3,InterPro:IPR004230,InterPro:IPR011335,InterPro:IPR011337,NCBI_GP:CAL13351.1;Name=CAL13351.1;gbkey=CDS;gene=mutH;product=DNA mismatch repair protein;protein_id=CAL13351.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3630652	3630951	.	+	.	ID=id5878;Note=Pfam match to entry PF02976 MutH%2C DNA mismatch repair enzyme MutH%2C score 188.8%2C E-value 5.6e-54;gbkey=misc_feature;gene=mutH;inference=protein motif:PFAM:PF02976
AM286415.1	EMBL	gene	3631264	3631980	.	+	.	ID=gene3278;Name=YE3323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3323
AM286415.1	EMBL	CDS	3631264	3631980	.	+	0	ID=cds3182;Parent=gene3278;Dbxref=EnsemblGenomes-Gn:YE3323,EnsemblGenomes-Tr:CAL13352,GOA:A1JPE5,InterPro:IPR005496,UniProtKB/TrEMBL:A1JPE5,NCBI_GP:CAL13352.1;Name=CAL13352.1;Note=Similar to many proteins of unknown function including: Salmonella typhimurium%2C and Salmonella typhi putative integral membrane transport protein YgdQ or Stm3006 or Sty3149 SWALL:Q8XES3 (EMBL:AE008838) (237 aa) fasta scores: E(): 8.2e-73%2C 84.18 38d in 234 aa%2CEscherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YgdQ or b2832 or z4150 or ecs3689 SWALL:YGDQ_ECOLI (SWALL:Q46931) (237 aa) fasta scores: E(): 2.7e-71%2C 83.33 38d in 234 aa and to Haemophilus influenzae hypothetical protein Hi0056 hi0056 SWALL:YGDQ_HAEIN (SWALL:P43932) (237 aa) fasta scores: E(): 5.2e-50%2C 60.68 38d in 234 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q46931;product=putative integral membrane protein;protein_id=CAL13352.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3631282	3631947	.	+	.	ID=id5879;Note=Pfam match to entry PF03741 TerC%2C Integral membrane protein TerC family%2C score 353.0%2C E-value 2.1e-103;gbkey=misc_feature;inference=protein motif:PFAM:PF03741
AM286415.1	EMBL	sequence_feature	3631306	3631374	.	+	.	ID=id5880;Note=7 probable transmembrane helices predicted for YE3323 by TMHMM2.0 at aa 15-37%2C 50-72%2C 78-100%2C 121-138%2C153-175%2C 187-206 and 211-228;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	3631411	3631479	.	+	.	ID=id5880;Note=7 probable transmembrane helices predicted for YE3323 by TMHMM2.0 at aa 15-37%2C 50-72%2C 78-100%2C 121-138%2C153-175%2C 187-206 and 211-228;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	3631495	3631563	.	+	.	ID=id5880;Note=7 probable transmembrane helices predicted for YE3323 by TMHMM2.0 at aa 15-37%2C 50-72%2C 78-100%2C 121-138%2C153-175%2C 187-206 and 211-228;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	3631624	3631677	.	+	.	ID=id5880;Note=7 probable transmembrane helices predicted for YE3323 by TMHMM2.0 at aa 15-37%2C 50-72%2C 78-100%2C 121-138%2C153-175%2C 187-206 and 211-228;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	3631720	3631788	.	+	.	ID=id5880;Note=7 probable transmembrane helices predicted for YE3323 by TMHMM2.0 at aa 15-37%2C 50-72%2C 78-100%2C 121-138%2C153-175%2C 187-206 and 211-228;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	3631822	3631881	.	+	.	ID=id5880;Note=7 probable transmembrane helices predicted for YE3323 by TMHMM2.0 at aa 15-37%2C 50-72%2C 78-100%2C 121-138%2C153-175%2C 187-206 and 211-228;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	3631894	3631947	.	+	.	ID=id5880;Note=7 probable transmembrane helices predicted for YE3323 by TMHMM2.0 at aa 15-37%2C 50-72%2C 78-100%2C 121-138%2C153-175%2C 187-206 and 211-228;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	3632131	3633171	.	+	.	ID=gene3279;Name=tas;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=YE3324
AM286415.1	EMBL	CDS	3632131	3633171	.	+	0	ID=cds3183;Parent=gene3279;Dbxref=EnsemblGenomes-Gn:YE3324,EnsemblGenomes-Tr:CAL13353,InterPro:IPR001395,InterPro:IPR023210,UniProtKB/TrEMBL:A1JPE6,NCBI_GP:CAL13353.1;Name=CAL13353.1;gbkey=CDS;gene=tas;product=putative aldo/keto reductase-family protein;protein_id=CAL13353.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3632149	3633153	.	+	.	ID=id5881;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 178.5%2C E-value 7.3e-51;gbkey=misc_feature;gene=tas;inference=protein motif:PFAM:PF00248
AM286415.1	EMBL	repeat_region	3633284	3634666	.	+	.	ID=id5882;Note=Insertion sequence element IS1667;gbkey=repeat_region
AM286415.1	EMBL	gene	3633371	3634390	.	+	.	ID=gene3280;Name=YE3325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3325
AM286415.1	EMBL	CDS	3633371	3634390	.	+	0	ID=cds3184;Parent=gene3280;Dbxref=EnsemblGenomes-Gn:YE3325,EnsemblGenomes-Tr:CAL13354,GOA:A1JMG2,InterPro:IPR002525,InterPro:IPR003346,UniProtKB/TrEMBL:A1JMG2,NCBI_GP:CAL13354.1;Name=CAL13354.1;Note=Similar to Pseudomonas putida transposase Tnpa1 protein SWALL:Q9K2X6 (EMBL:AJ288911) (344 aa) fasta scores: E(): 1.9e-56%2C 45.64 38d in 344 aa and to Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 3.8e-50%2C 42.16 38d in 332 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=putative transposase for IS1667;protein_id=CAL13354.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3633560	3633838	.	+	.	ID=id5883;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 30.3%2C E-value 2.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	sequence_feature	3633929	3634258	.	+	.	ID=id5884;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 98.4%2C E-value 9.5e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	gene	3634844	3636058	.	-	.	ID=gene3281;Name=ygeD;gbkey=Gene;gene=ygeD;gene_biotype=protein_coding;locus_tag=YE3326
AM286415.1	EMBL	CDS	3634844	3636058	.	-	0	ID=cds3185;Parent=gene3281;Dbxref=EnsemblGenomes-Gn:YE3326,EnsemblGenomes-Tr:CAL13355,GOA:A1JPE9,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR023727,NCBI_GP:CAL13355.1;Name=CAL13355.1;gbkey=CDS;gene=ygeD;product=putative membrane protein;protein_id=CAL13355.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3635936	3636004	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3635840	3635908	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3635711	3635779	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3635585	3635653	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3635504	3635572	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3635420	3635476	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3635333	3635401	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3635222	3635290	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3635150	3635203	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3635069	3635137	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3634964	3635032	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3634883	3634951	.	-	.	ID=id5885;Note=12 probable transmembrane helices predicted for YE3326 by TMHMM2.0 at aa 19-41%2C 51-73%2C 94-116%2C 136-158%2C163-185%2C 195-213%2C 220-242%2C 257-279%2C 286-303%2C 308-330%2C343-365 and 370-392;gbkey=misc_feature;gene=ygeD;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	3636055	3638211	.	-	.	ID=gene3282;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=YE3327
AM286415.1	EMBL	CDS	3636055	3638211	.	-	0	ID=cds3186;Parent=gene3282;Dbxref=EnsemblGenomes-Gn:YE3327,EnsemblGenomes-Tr:CAL13356,GOA:A1JPF0,InterPro:IPR000873,InterPro:IPR002123,InterPro:IPR020845,InterPro:IPR023775,NCBI_GP:CAL13356.1;Name=CAL13356.1;gbkey=CDS;gene=aas;product=Aas bifunctional protein;protein_id=CAL13356.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3636274	3637515	.	-	.	ID=id5886;Note=Pfam match to entry PF00501 AMP-binding%2CAMP-binding enzyme%2C score 264.0%2C E-value 1.3e-76;gbkey=misc_feature;gene=aas;inference=protein motif:PFAM:PF00501
AM286415.1	EMBL	sequence_feature	3636760	3636789	.	-	.	ID=id5887;Note=PS00215 Mitochondrial energy transfer proteins signature.;gbkey=misc_feature;gene=aas;inference=protein motif:Prosite:PS00215
AM286415.1	EMBL	sequence_feature	3637069	3637104	.	-	.	ID=id5888;Note=PS00455 Putative AMP-binding domain signature.;gbkey=misc_feature;gene=aas;inference=protein motif:Prosite:PS00455
AM286415.1	EMBL	sequence_feature	3637612	3638148	.	-	.	ID=id5889;Note=Pfam match to entry PF01553 Acyltransferase%2CAcyltransferase%2C score 98.8%2C E-value 7.1e-27;gbkey=misc_feature;gene=aas;inference=protein motif:PFAM:PF01553
AM286415.1	EMBL	transcript	3638306	3638400	.	-	.	ID=rna126;Note=SraE/RygA/RygB family RNA (RF00079) as predicted by Rfam%2C score 38.04%2C positions 1 to 87;gbkey=misc_RNA
AM286415.1	EMBL	exon	3638306	3638400	.	-	.	ID=id5890;Parent=rna126;Note=SraE/RygA/RygB family RNA (RF00079) as predicted by Rfam%2C score 38.04%2C positions 1 to 87;gbkey=misc_RNA
AM286415.1	EMBL	repeat_region	3638643	3640035	.	+	.	ID=id5891;Note=Insertion sequence element IS1667;gbkey=repeat_region
AM286415.1	EMBL	pseudogene	3638730	3639759	.	+	.	ID=gene3283;Name=YE3328;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE3328;pseudo=true
AM286415.1	EMBL	CDS	3638730	3639170	.	+	0	ID=cds3187;Parent=gene3283;Dbxref=PSEUDO:CAL13357.1;Note=Similar to Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 8.4e-49%2C 40.95 id in 337 aa and to Pseudomonas putida transposase TnpA SWALL:O85214 (EMBL:AF052750) (341 aa) fasta scores: E(): 4.6e-45%2C 44.57 38d in 341 aa. Note this CDS contains a frameshift mutation after codon 147.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=putative transposase for IS1667 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3639166	3639759	.	+	0	ID=cds3187;Parent=gene3283;Dbxref=PSEUDO:CAL13357.1;Note=Similar to Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 8.4e-49%2C 40.95 id in 337 aa and to Pseudomonas putida transposase TnpA SWALL:O85214 (EMBL:AF052750) (341 aa) fasta scores: E(): 4.6e-45%2C 44.57 38d in 341 aa. Note this CDS contains a frameshift mutation after codon 147.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=putative transposase for IS1667 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	3638919	3639167	.	+	.	ID=id5892;Note=Pfam match to entry PF01548 Transposase_9%2CTransposase%2C score 17.6%2C E-value 0.00016;gbkey=misc_feature;inference=protein motif:PFAM:PF01548
AM286415.1	EMBL	repeat_region	3639156	3639180	.	+	.	ID=id5893;Note=repeat region containing 2.5 x TTGGCTGAAT repeats. This possible duplication results in a framshift mutation in CDS YE3327;gbkey=repeat_region
AM286415.1	EMBL	gene	3640131	3642389	.	-	.	ID=gene3284;Name=bisC;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=YE3330
AM286415.1	EMBL	CDS	3640131	3642389	.	-	0	ID=cds3188;Parent=gene3284;Dbxref=EnsemblGenomes-Gn:YE3330,EnsemblGenomes-Tr:CAL13358,GOA:A1JPF2,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR009010,UniProtKB/TrEMBL:A1JPF2,NCBI_GP:CAL13358.1;Name=CAL13358.1;gbkey=CDS;gene=bisC;product=putative biotin sulfoxide reductas2;protein_id=CAL13358.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3640152	3640517	.	-	.	ID=id5894;Note=Pfam match to entry PF01568 Molydop_binding%2CMolydopterin dinucleotide binding domain%2C score 110.4%2CE-value 2.2e-30;gbkey=misc_feature;gene=bisC;inference=protein motif:PFAM:PF01568
AM286415.1	EMBL	sequence_feature	3640614	3642386	.	-	.	ID=id5895;Note=Pfam match to entry PF00384 molybdopterin%2CMolybdopterin oxidoreductase%2C score 460.4%2C E-value 1e-135;gbkey=misc_feature;gene=bisC;inference=protein motif:PFAM:PF00384
AM286415.1	EMBL	sequence_feature	3640980	3641033	.	-	.	ID=id5896;Note=PS00490 Prokaryotic molybdopterin oxidoreductases signature 2.;gbkey=misc_feature;gene=bisC;inference=protein motif:Prosite:PS00490
AM286415.1	EMBL	gene	3642679	3643749	.	+	.	ID=gene3285;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=YE3331
AM286415.1	EMBL	CDS	3642679	3643749	.	+	0	ID=cds3189;Parent=gene3285;Dbxref=EnsemblGenomes-Gn:YE3331,EnsemblGenomes-Tr:CAL13359,GOA:A1JPF3,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JPF3,NCBI_GP:CAL13359.1;Name=CAL13359.1;gbkey=CDS;gene=galR;product=galactose operon repressor;protein_id=CAL13359.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3642679	3642759	.	+	.	ID=id5897;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 57.8%2C E-value 1.5e-14;gbkey=misc_feature;gene=galR;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	3642688	3642744	.	+	.	ID=id5898;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=galR;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	sequence_feature	3642853	3643674	.	+	.	ID=id5899;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 54.8%2C E-value 1.2e-13;gbkey=misc_feature;gene=galR;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	3643768	3645030	.	-	.	ID=gene3286;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=YE3332
AM286415.1	EMBL	CDS	3643768	3645030	.	-	0	ID=cds3190;Parent=gene3286;Dbxref=EnsemblGenomes-Gn:YE3332,EnsemblGenomes-Tr:CAL13360,GOA:A1JPF4,InterPro:IPR000183,InterPro:IPR002986,InterPro:IPR009006,InterPro:IPR022643,InterPro:IPR022644,InterPro:IPR022653,InterPro:IPR022657,InterPro:IPR029066,UniProtKB/TrEMBL:A1JPF4,NCBI_GP:CAL13360.1;Name=CAL13360.1;gbkey=CDS;gene=lysA;product=diaminopimelate decarboxylase;protein_id=CAL13360.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3643837	3644196	.	-	.	ID=id5900;Note=Pfam match to entry PF00278 Orn_DAP_Arg_deC%2CPyridoxal-dependent decarboxylase%2C C-terminal sheet domain%2C score 184.3%2C E-value 1.3e-52;gbkey=misc_feature;gene=lysA;inference=protein motif:PFAM:PF00278
AM286415.1	EMBL	sequence_feature	3644203	3644937	.	-	.	ID=id5901;Note=Pfam match to entry PF02784 Orn_Arg_deC_N%2CPyridoxal-dependent decarboxylase%2C pyridoxal binding domain%2C score 255.4%2C E-value 5e-74;gbkey=misc_feature;gene=lysA;inference=protein motif:PFAM:PF02784
AM286415.1	EMBL	sequence_feature	3644344	3644385	.	-	.	ID=id5902;Note=PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2.;gbkey=misc_feature;gene=lysA;inference=protein motif:Prosite:PS00879
AM286415.1	EMBL	sequence_feature	3644824	3644880	.	-	.	ID=id5903;Note=PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site.;gbkey=misc_feature;gene=lysA;inference=protein motif:Prosite:PS00878
AM286415.1	EMBL	gene	3645197	3646150	.	+	.	ID=gene3287;Name=lysR;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=YE3333
AM286415.1	EMBL	CDS	3645197	3646150	.	+	0	ID=cds3191;Parent=gene3287;Dbxref=EnsemblGenomes-Gn:YE3333,EnsemblGenomes-Tr:CAL13361,GOA:A1JPF6,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JPF6,NCBI_GP:CAL13361.1;Name=CAL13361.1;gbkey=CDS;gene=lysR;product=transcriptional activator protein LysR;protein_id=CAL13361.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3645212	3645391	.	+	.	ID=id5904;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 66.6%2C E-value 3.5e-17;gbkey=misc_feature;gene=lysR;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	3645254	3645346	.	+	.	ID=id5905;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=lysR;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	3645461	3646093	.	+	.	ID=id5906;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 140.4%2C E-value 2.1e-39;gbkey=misc_feature;gene=lysR;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	3645464	3645496	.	+	.	ID=id5907;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=lysR;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3646147	3647307	.	-	.	ID=gene3288;Name=YE3334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3334
AM286415.1	EMBL	CDS	3646147	3647307	.	-	0	ID=cds3192;Parent=gene3288;Dbxref=EnsemblGenomes-Gn:YE3334,EnsemblGenomes-Tr:CAL13362,GOA:A1JPF7,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JPF7,NCBI_GP:CAL13362.1;Name=CAL13362.1;gbkey=CDS;product=putative sugar transport protein;protein_id=CAL13362.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3646150	3647307	.	-	.	ID=id5908;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -57.2%2C E-value 8.2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	3647230	3647295	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3647119	3647187	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3647041	3647100	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3646945	3647013	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3646864	3646932	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3646783	3646851	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3646642	3646710	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3646540	3646599	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3646453	3646521	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3646357	3646425	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3646264	3646323	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3646183	3646251	.	-	.	ID=id5909;Note=12 probable transmembrane helices predicted for YE3334 by TMHMM2.0 at aa 5-26%2C 41-63%2C 70-89%2C 99-121%2C126-148%2C 153-175%2C 200-222%2C 237-256%2C 263-285%2C 295-317%2C329-348 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	3647794	3648690	.	-	.	ID=gene3289;Name=YE3335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3335
AM286415.1	EMBL	CDS	3647794	3648690	.	-	0	ID=cds3193;Parent=gene3289;Dbxref=EnsemblGenomes-Gn:YE3335,EnsemblGenomes-Tr:CAL13363,GOA:A1JPF8,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JPF8,NCBI_GP:CAL13363.1;Name=CAL13363.1;gbkey=CDS;product=LysR-family transcriptional regulatory protein;protein_id=CAL13363.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3647815	3648432	.	-	.	ID=id5910;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 159.8%2C E-value 3.1e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	3648502	3648681	.	-	.	ID=id5911;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 59.1%2C E-value 6e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	3648547	3648639	.	-	.	ID=id5912;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	gene	3648798	3649685	.	+	.	ID=gene3290;Name=YE3336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3336
AM286415.1	EMBL	CDS	3648798	3649685	.	+	0	ID=cds3194;Parent=gene3290;Dbxref=EnsemblGenomes-Gn:YE3336,EnsemblGenomes-Tr:CAL13364,InterPro:IPR001279,UniProtKB/TrEMBL:A1JPF9,NCBI_GP:CAL13364.1;Name=CAL13364.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13364.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3648909	3649481	.	+	.	ID=id5913;Note=Pfam match to entry PF00753 lactamase_B%2CMetallo-beta-lactamase superfamily%2C score 2.9%2C E-value 0.0011;gbkey=misc_feature;inference=protein motif:PFAM:PF00753
AM286415.1	EMBL	gene	3649748	3650392	.	+	.	ID=gene3291;Name=YE3337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3337
AM286415.1	EMBL	CDS	3649748	3650392	.	+	0	ID=cds3195;Parent=gene3291;Dbxref=EnsemblGenomes-Gn:YE3337,EnsemblGenomes-Tr:CAL13365,GOA:A1JPG0,InterPro:IPR001853,InterPro:IPR012336,InterPro:IPR023169,UniProtKB/TrEMBL:A1JPG0,NCBI_GP:CAL13365.1;Name=CAL13365.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13365.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3650397	3666052	.	-	.	ID=id5914;Note=Region of DNA with a low CG%26ontent%2C 33.99 This region carries the General Secretion Pathway operon yst2 conserved in both Y. pestis and Y. pseudotuberculosis.;gbkey=misc_feature
AM286415.1	EMBL	gene	3650397	3651938	.	-	.	ID=gene3292;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;gene_synonym=tse;locus_tag=YE3338
AM286415.1	EMBL	CDS	3650397	3651938	.	-	0	ID=cds3196;Parent=gene3292;Dbxref=EnsemblGenomes-Gn:YE3338,EnsemblGenomes-Tr:CAL13366,GOA:A1JPG1,InterPro:IPR003122,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,UniProtKB/TrEMBL:A1JPG1,NCBI_GP:CAL13366.1;Name=CAL13366.1;gbkey=CDS;gene=cheD;product=putative methyl-accepting chemotaxis protein;protein_id=CAL13366.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3650442	3651140	.	-	.	ID=id5915;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 206.0%2C E-value 3.6e-59;gbkey=misc_feature;gene=cheD;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	sequence_feature	3651201	3651416	.	-	.	ID=id5916;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 46.9%2C E-value 3e-11;gbkey=misc_feature;gene=cheD;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	3651360	3651419	.	-	.	ID=id5917;Note=1 probable transmembrane helix predicted for YE3338 by TMHMM2.0 at aa 174-193;gbkey=misc_feature;gene=cheD;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3651456	3651866	.	-	.	ID=id5918;Note=Pfam match to entry PF02203 TarH%2C Tar ligand binding domain homologue%2C score 25.0%2C E-value 0.00011;gbkey=misc_feature;gene=cheD;inference=protein motif:PFAM:PF02203
AM286415.1	EMBL	gene	3652152	3652598	.	-	.	ID=gene3293;Name=YE3339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3339
AM286415.1	EMBL	CDS	3652152	3652598	.	-	0	ID=cds3197;Parent=gene3293;Dbxref=EnsemblGenomes-Gn:YE3339,EnsemblGenomes-Tr:CAL13367,UniProtKB/TrEMBL:A1JPG3,NCBI_GP:CAL13367.1;Name=CAL13367.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13367.1;transl_table=11
AM286415.1	EMBL	gene	3652607	3653266	.	-	.	ID=gene3294;Name=YE3340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3340
AM286415.1	EMBL	CDS	3652607	3653266	.	-	0	ID=cds3198;Parent=gene3294;Dbxref=EnsemblGenomes-Gn:YE3340,EnsemblGenomes-Tr:CAL13368,GOA:A1JPG4,InterPro:IPR001867,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JPG4,NCBI_GP:CAL13368.1;Name=CAL13368.1;Note=Similar to many proteins including: Yersinia pestis putative regulatory membrane protein Ypo0804 SWALL:Q8ZHT0 (EMBL:AJ414144) (238 aa) fasta scores: E(): 9.2e-35%2C 50.5 id in 200 aa and to Yersinia pestis KIM hypothetical Y3192 SWALL:AAM86742 (EMBL:AE013920) (234 aa) fasta scores: E(): 1.8e-33%2C 50 38d in 196 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414144;product=possible reguatory protein;protein_id=CAL13368.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3652799	3652867	.	-	.	ID=id5919;Note=1 probable transmembrane helix predicted for YE3340 by TMHMM2.0 at aa 101-123;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3652991	3653167	.	-	.	ID=id5920;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 28.9%2C E-value 3.3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	pseudogene	3653707	3654465	.	-	.	ID=gene3295;Name=YE3341;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3341;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	3653688	3653705	.	-	.	ID=gene3295;Name=YE3341;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3341;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	3653707	3654465	.	-	0	ID=cds3199;Parent=gene3295;gbkey=CDS;product=prepilin peptidase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3653688	3653705	.	-	0	ID=cds3199;Parent=gene3295;gbkey=CDS;product=prepilin peptidase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	3654480	3654905	.	-	.	ID=gene3296;Name=YE3342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3342
AM286415.1	EMBL	CDS	3654480	3654905	.	-	0	ID=cds3200;Parent=gene3296;Dbxref=EnsemblGenomes-Gn:YE3342,EnsemblGenomes-Tr:CAL13370,UniProtKB/TrEMBL:A1JPG6,NCBI_GP:CAL13370.1;Name=CAL13370.1;Note=no significant database hits;gbkey=CDS;product=putative exported protein;protein_id=CAL13370.1;transl_table=11
AM286415.1	EMBL	gene	3654920	3656116	.	-	.	ID=gene3297;Name=outL;gbkey=Gene;gene=outL;gene_biotype=protein_coding;gene_synonym=yst2L;locus_tag=YE3343
AM286415.1	EMBL	CDS	3654920	3656116	.	-	0	ID=cds3201;Parent=gene3297;Dbxref=EnsemblGenomes-Gn:YE3343,EnsemblGenomes-Tr:CAL13371,InterPro:IPR024230,UniProtKB/TrEMBL:A1JPG7,NCBI_GP:CAL13371.1;Name=CAL13371.1;gbkey=CDS;gene=outL;product=general secretion pathway protein L;protein_id=CAL13371.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3655307	3655375	.	-	.	ID=id5921;Note=1 probable transmembrane helix predicted for YE3343 by TMHMM2.0 at aa 248-270;gbkey=misc_feature;gene=outL;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3656116	3657057	.	-	.	ID=gene3298;Name=outK;gbkey=Gene;gene=outK;gene_biotype=protein_coding;gene_synonym=yst2K;locus_tag=YE3344
AM286415.1	EMBL	CDS	3656116	3657057	.	-	0	ID=cds3202;Parent=gene3298;Dbxref=EnsemblGenomes-Gn:YE3344,EnsemblGenomes-Tr:CAL13372,GOA:A1JPG8,InterPro:IPR005628,UniProtKB/TrEMBL:A1JPG8,NCBI_GP:CAL13372.1;Name=CAL13372.1;gbkey=CDS;gene=outK;product=general secretion pathway protein K;protein_id=CAL13372.1;transl_table=11
AM286415.1	EMBL	gene	3657072	3657665	.	-	.	ID=gene3299;Name=outJ;gbkey=Gene;gene=outJ;gene_biotype=protein_coding;gene_synonym=yst2J;locus_tag=YE3344A
AM286415.1	EMBL	CDS	3657072	3657665	.	-	0	ID=cds3203;Parent=gene3299;Dbxref=EnsemblGenomes-Gn:YE3344A,EnsemblGenomes-Tr:CAL13373,GOA:A1JPG9,InterPro:IPR010055,InterPro:IPR012902,UniProtKB/TrEMBL:A1JPG9,NCBI_GP:CAL13373.1;Name=CAL13373.1;Note=Similar to Aeromonas hydrophila general secretion pathway protein J precursor ExeJ SWALL:GSPJ_AERHY (SWALL:P31739) (207 aa) fasta scores: E(): 1.8e-11%2C 27.36 id in 190 aa%2C Yersinia pestis general secretion pathway protein J Ypo0810 SWALL:Q8ZHS4 (EMBL:AJ414144) (198 aa) fasta scores: E(): 2.9e-22%2C 35.35 38d in 198 aa%2C and to Erwinia carotovora general secretion pathway protein j precursor outJ SWALL:GSPJ_ERWCA (SWALL:P31589) (216 aa) fasta scores: E(): 1.7e-09%2C 24.6 38d in 191 aa;gbkey=CDS;gene=outJ;inference=similar to sequence:UniProtKB:P31739;product=general secretion pathway protein J precursor;protein_id=CAL13373.1;transl_table=11
AM286415.1	EMBL	gene	3657658	3658020	.	-	.	ID=gene3300;Name=outI;gbkey=Gene;gene=outI;gene_biotype=protein_coding;gene_synonym=yst2I;locus_tag=YE3345
AM286415.1	EMBL	CDS	3657658	3658020	.	-	0	ID=cds3204;Parent=gene3300;Dbxref=EnsemblGenomes-Gn:YE3345,EnsemblGenomes-Tr:CAL13374,GOA:A1JPH0,InterPro:IPR003413,InterPro:IPR010052,InterPro:IPR012902,UniProtKB/TrEMBL:A1JPH0,NCBI_GP:CAL13374.1;Name=CAL13374.1;gbkey=CDS;gene=outI;product=general secretion pathway protein I;protein_id=CAL13374.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3657667	3658002	.	-	.	ID=id5922;Note=Pfam match to entry PF02501 GSPII_IJ%2C Bacterial type II secretion system protein I/J%2C score 44.5%2C E-value 1.6e-10;gbkey=misc_feature;gene=outI;inference=protein motif:PFAM:PF02501
AM286415.1	EMBL	sequence_feature	3657934	3658002	.	-	.	ID=id5923;Note=1 probable transmembrane helix predicted for YE3345 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=outI;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3658058	3658507	.	-	.	ID=gene3301;Name=outG;gbkey=Gene;gene=outG;gene_biotype=protein_coding;gene_synonym=yst2G;locus_tag=YE3346
AM286415.1	EMBL	CDS	3658058	3658507	.	-	0	ID=cds3205;Parent=gene3301;Dbxref=EnsemblGenomes-Gn:YE3346,EnsemblGenomes-Tr:CAL13375,GOA:A1JPH1,InterPro:IPR000983,InterPro:IPR010054,InterPro:IPR012902,InterPro:IPR013545,UniProtKB/TrEMBL:A1JPH1,NCBI_GP:CAL13375.1;Name=CAL13375.1;gbkey=CDS;gene=outG;product=general secretion pathway protein G;protein_id=CAL13375.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3658427	3658489	.	-	.	ID=id5924;Note=PS00409 Prokaryotic N-terminal methylation site.;gbkey=misc_feature;gene=outG;inference=protein motif:Prosite:PS00409
AM286415.1	EMBL	gene	3658527	3659735	.	-	.	ID=gene3302;Name=outF;gbkey=Gene;gene=outF;gene_biotype=protein_coding;gene_synonym=yst2F;locus_tag=YE3347
AM286415.1	EMBL	CDS	3658527	3659735	.	-	0	ID=cds3206;Parent=gene3302;Dbxref=EnsemblGenomes-Gn:YE3347,EnsemblGenomes-Tr:CAL13376,InterPro:IPR003004,InterPro:IPR018076,UniProtKB/TrEMBL:A1JPH2,NCBI_GP:CAL13376.1;Name=CAL13376.1;Note=Similar to Erwinia carotovora general secretion pathway protein F OutF SWALL:GSPF_ERWCA (SWALL:P31705) (408 aa) fasta scores: E(): 6.3e-52%2C 39.7 38d in 408 aa%2Cand to Escherichia coli putative general secretion pathway protein f hoff or hopf or b3327 SWALL:GSPF_ECOLI (SWALL:P41441) (398 aa) fasta scores: E(): 6.2e-50%2C 38.44 id in 398 aa;gbkey=CDS;gene=outF;inference=similar to sequence:UniProtKB:P41441;product=general secretion pathway protein;protein_id=CAL13376.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3658545	3659531	.	-	.	ID=id5925;Note=Pfam match to entry PF00482 GSPII_F%2C Bacterial type II secretion system protein F domain%2C score 379.5%2CE-value 2.2e-111;gbkey=misc_feature;gene=outF;inference=protein motif:PFAM:PF00482
AM286415.1	EMBL	sequence_feature	3659166	3659234	.	-	.	ID=id5926;Note=3 probable transmembrane helices predicted for YE3347 by TMHMM2.0 at aa 168-190%2C 222-239 and 368-390;gbkey=misc_feature;gene=outF;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3659019	3659072	.	-	.	ID=id5926;Note=3 probable transmembrane helices predicted for YE3347 by TMHMM2.0 at aa 168-190%2C 222-239 and 368-390;gbkey=misc_feature;gene=outF;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3658566	3658634	.	-	.	ID=id5926;Note=3 probable transmembrane helices predicted for YE3347 by TMHMM2.0 at aa 168-190%2C 222-239 and 368-390;gbkey=misc_feature;gene=outF;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3659722	3661203	.	-	.	ID=gene3303;Name=outE;gbkey=Gene;gene=outE;gene_biotype=protein_coding;gene_synonym=yst2E;locus_tag=YE3348
AM286415.1	EMBL	CDS	3659722	3661203	.	-	0	ID=cds3207;Parent=gene3303;Dbxref=EnsemblGenomes-Gn:YE3348,EnsemblGenomes-Tr:CAL13377,GOA:A1JPH3,InterPro:IPR001482,InterPro:IPR003593,InterPro:IPR013369,InterPro:IPR027417,UniProtKB/TrEMBL:A1JPH3,NCBI_GP:CAL13377.1;Name=CAL13377.1;gbkey=CDS;gene=outE;product=general secretion pathway protein E;protein_id=CAL13377.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3660055	3660900	.	-	.	ID=id5927;Note=Pfam match to entry PF00437 GSPII_E%2C Type II/IV secretion system protein%2C score 547.2%2C E-value 7.1e-162;gbkey=misc_feature;gene=outE;inference=protein motif:PFAM:PF00437
AM286415.1	EMBL	sequence_feature	3660244	3660288	.	-	.	ID=id5928;Note=PS00662 Bacterial type II secretion system protein E signature.;gbkey=misc_feature;gene=outE;inference=protein motif:Prosite:PS00662
AM286415.1	EMBL	sequence_feature	3660442	3660465	.	-	.	ID=id5929;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=outE;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3661224	3663170	.	-	.	ID=gene3304;Name=outD;gbkey=Gene;gene=outD;gene_biotype=protein_coding;gene_synonym=yst2D;locus_tag=YE3349
AM286415.1	EMBL	CDS	3661224	3663170	.	-	0	ID=cds3208;Parent=gene3304;Dbxref=EnsemblGenomes-Gn:YE3349,EnsemblGenomes-Tr:CAL13378,GOA:A1JPH4,InterPro:IPR001775,InterPro:IPR004845,InterPro:IPR004846,InterPro:IPR005644,InterPro:IPR013356,UniProtKB/TrEMBL:A1JPH4,NCBI_GP:CAL13378.1;Name=CAL13378.1;gbkey=CDS;gene=outD;product=general secretion pathway protein D;protein_id=CAL13378.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3661407	3662219	.	-	.	ID=id5930;Note=Pfam match to entry PF00263 GSPII_III%2C Bacterial type II and III secretion system protein%2C score 340.3%2CE-value 1.4e-99;gbkey=misc_feature;gene=outD;inference=protein motif:PFAM:PF00263
AM286415.1	EMBL	sequence_feature	3661473	3661574	.	-	.	ID=id5931;Note=PS00875 Bacterial type II secretion system protein D signature.;gbkey=misc_feature;gene=outD;inference=protein motif:Prosite:PS00875
AM286415.1	EMBL	sequence_feature	3662373	3662462	.	-	.	ID=id5932;Note=Pfam match to entry PF00263 GSPII_III%2C Bacterial type II and III secretion system protein%2C score 15.4%2CE-value 0.00029;gbkey=misc_feature;gene=outD;inference=protein motif:PFAM:PF00263
AM286415.1	EMBL	gene	3663207	3663728	.	-	.	ID=gene3305;Name=outC;gbkey=Gene;gene=outC;gene_biotype=protein_coding;gene_synonym=yst2C;locus_tag=YE3350
AM286415.1	EMBL	CDS	3663207	3663728	.	-	0	ID=cds3209;Parent=gene3305;Dbxref=EnsemblGenomes-Gn:YE3350,EnsemblGenomes-Tr:CAL13379,UniProtKB/TrEMBL:A1JPH5,NCBI_GP:CAL13379.1;Name=CAL13379.1;gbkey=CDS;gene=outC;product=general secretion pathway protein C;protein_id=CAL13379.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3663615	3663668	.	-	.	ID=id5933;Note=1 probable transmembrane helix predicted for YE3350 by TMHMM2.0 at aa 21-38;gbkey=misc_feature;gene=outC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3663788	3664204	.	-	.	ID=gene3306;Name=YE3351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3351
AM286415.1	EMBL	CDS	3663788	3664204	.	-	0	ID=cds3210;Parent=gene3306;Dbxref=EnsemblGenomes-Gn:YE3351,EnsemblGenomes-Tr:CAL13380,GOA:A1JPH6,InterPro:IPR016032,UniProtKB/TrEMBL:A1JPH6,NCBI_GP:CAL13380.1;Name=CAL13380.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13380.1;transl_table=11
AM286415.1	EMBL	gene	3664902	3665657	.	-	.	ID=gene3307;Name=YE3352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3352
AM286415.1	EMBL	CDS	3664902	3665657	.	-	0	ID=cds3211;Parent=gene3307;Dbxref=EnsemblGenomes-Gn:YE3352,EnsemblGenomes-Tr:CAL13381,GOA:A1JPH7,InterPro:IPR001765,InterPro:IPR006311,InterPro:IPR019546,UniProtKB/TrEMBL:A1JPH7,NCBI_GP:CAL13381.1;Name=CAL13381.1;gbkey=CDS;product=putative carbonic anhydrase;protein_id=CAL13381.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3664923	3665426	.	-	.	ID=id5934;Note=Pfam match to entry PF00484 Pro_CA%2C Carbonic anhydrase%2C score 6.9%2C E-value 7.9e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00484
AM286415.1	EMBL	sequence_feature	3665349	3665381	.	-	.	ID=id5935;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3665807	3666190	.	-	.	ID=gene3308;Name=YE3353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3353
AM286415.1	EMBL	CDS	3665807	3666190	.	-	0	ID=cds3212;Parent=gene3308;Dbxref=EnsemblGenomes-Gn:YE3353,EnsemblGenomes-Tr:CAL13382,InterPro:IPR002577,InterPro:IPR011991,UniProtKB/TrEMBL:A1JPH8,NCBI_GP:CAL13382.1;Name=CAL13382.1;Note=Weakly similar to mant including: Lactococcus lactis hypothetical protein YweE or Ll2171 SWALL:Q9CDP8 (EMBL:AE006446) (92 aa) fasta scores: E(): 1e-13%2C 48.91 id in 92 aa%2C Clostridium acetobutylicum predicted transcriptional regulator Cac2934 SWALL:Q97F21 (EMBL:AE007790) (112 aa) fasta scores: E(): 1.9e-13%2C45.36 38d in 97 aa and to Clostridium acetobutylicum predicted transcriptional regulator Cac2568 SWALL:Q97G06 (EMBL:AE007754) (117 aa) fasta scores: E(): 2.7e-13%2C44.08 38d in 93 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE007790;product=hypothetical protein;protein_id=CAL13382.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3665819	3666097	.	-	.	ID=id5936;Note=Pfam match to entry PF01638 DUF24%2C Transcriptional regulator%2C score 90.8%2C E-value 1.8e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF01638
AM286415.1	EMBL	gene	3666293	3667042	.	+	.	ID=gene3309;Name=YE3354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3354
AM286415.1	EMBL	CDS	3666293	3667042	.	+	0	ID=cds3213;Parent=gene3309;Dbxref=EnsemblGenomes-Gn:YE3354,EnsemblGenomes-Tr:CAL13383,GOA:A1JPH9,InterPro:IPR002347,InterPro:IPR016040,InterPro:IPR020904,UniProtKB/TrEMBL:A1JPH9,NCBI_GP:CAL13383.1;Name=CAL13383.1;Note=Similar to many including: Rhizobium loti glucose dehydrogenase Mlr5280 SWALL:Q98C63 (EMBL:AP003006) (250 aa) fasta scores: E(): 7e-30%2C 42 38d in 250 aa%2C Rhizobium meliloti putative dehydrogenasereductase%2C short-chain dehydrogenases/reductases protein Rb1165 or Smb20871 SWALL:Q92UG6 (EMBL:AL603646) (249 aa) fasta scores: E(): 4.9e-29%2C 41.29 38d in 247 aa and to Streptomyces coelicolor putative oxidoreductase Sco0111 or Scj11.40 SWALL:Q9RI66 (EMBL:AL109949) (250 aa) fasta scores: E(): 1.5e-26%2C 39.34 38d in 244 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003006;product=putative oxidoreductase;protein_id=CAL13383.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3666305	3667030	.	+	.	ID=id5937;Note=Pfam match to entry PF00106 adh_short%2C short chain dehydrogenase%2C score 236.3%2C E-value 2.7e-68;gbkey=misc_feature;inference=protein motif:PFAM:PF00106
AM286415.1	EMBL	sequence_feature	3666701	3666787	.	+	.	ID=id5938;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	gene	3667114	3667419	.	-	.	ID=gene3310;Name=YE3355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3355
AM286415.1	EMBL	CDS	3667114	3667419	.	-	0	ID=cds3214;Parent=gene3310;Dbxref=EnsemblGenomes-Gn:YE3355,EnsemblGenomes-Tr:CAL13384,UniProtKB/TrEMBL:A1JPI1,NCBI_GP:CAL13384.1;Name=CAL13384.1;Note=Similar to several proteins of undefined function including: Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YccD or b0999 or z1417 or ecs1154 SWALL:YCCD_ECOLI (SWALL:P36660) (101 aa) fasta scores: E(): 4.8e-17%2C 52.04 38d in 98 aa and to Salmonella typhimurium%2C and Salmonella typhi putative cytoplasmic protein YccD or Stm1111 or sty1147 SWALL:Q8XGQ8 (EMBL:AE008748) (101 aa) fasta scores: E(): 9e-15%2C 47.95 id in 98 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P36660;product=conserved hypothetical protein;protein_id=CAL13384.1;transl_table=11
AM286415.1	EMBL	gene	3667426	3668379	.	-	.	ID=gene3311;Name=YE3356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3356
AM286415.1	EMBL	CDS	3667426	3668379	.	-	0	ID=cds3215;Parent=gene3311;Dbxref=EnsemblGenomes-Gn:YE3356,EnsemblGenomes-Tr:CAL13385,GOA:A1JPI2,InterPro:IPR001623,InterPro:IPR002939,InterPro:IPR008971,InterPro:IPR018253,UniProtKB/TrEMBL:A1JPI2,NCBI_GP:CAL13385.1;Name=CAL13385.1;Note=Similar to many DnaJ-like proteins including: Salmonella typhimurium%2C and Salmonella typhi curved DNA-binding protein CbpA or Stm1112 or Sty1148 SWALL:CBPA_SALTY (SWALL:O33916) (306 aa) fasta scores: E(): 3.1e-51%2C 64.66 38d in 317 aa and to Synechocystis sp. DNAJ-like protein Slr0093 SWALL:DNJH_SYNY3 (SWALL:P50027) (332 aa) fasta scores: E(): 7.6e-31%2C 36.79 38d in 337 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P50027;product=putative DNA-binding protein;protein_id=CAL13385.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3667465	3667824	.	-	.	ID=id5939;Note=Pfam match to entry PF01556 DnaJ_C%2C DnaJ C terminal region%2C score 136.6%2C E-value 2.9e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF01556
AM286415.1	EMBL	sequence_feature	3668173	3668367	.	-	.	ID=id5940;Note=Pfam match to entry PF00226 DnaJ%2C DnaJ domain %2Cscore 123.6%2C E-value 2.3e-34;gbkey=misc_feature;inference=protein motif:PFAM:PF00226
AM286415.1	EMBL	sequence_feature	3668185	3668244	.	-	.	ID=id5941;Note=PS00636 Nt-dnaJ domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00636
AM286415.1	EMBL	gene	3668569	3669651	.	-	.	ID=gene3312;Name=YE3357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3357
AM286415.1	EMBL	CDS	3668569	3669651	.	-	0	ID=cds3216;Parent=gene3312;Dbxref=EnsemblGenomes-Gn:YE3357,EnsemblGenomes-Tr:CAL13386,GOA:A1JPI3,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JPI3,NCBI_GP:CAL13386.1;Name=CAL13386.1;gbkey=CDS;product=LacI-family regulatory protein;protein_id=CAL13386.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3668644	3669477	.	-	.	ID=id5942;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score -4.4%2C E-value 2.9e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	3670044	3671351	.	+	.	ID=gene3313;Name=YE3358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3358
AM286415.1	EMBL	CDS	3670044	3671351	.	+	0	ID=cds3217;Parent=gene3313;Dbxref=EnsemblGenomes-Gn:YE3358,EnsemblGenomes-Tr:CAL13387,GOA:A1JPI5,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JPI5,NCBI_GP:CAL13387.1;Name=CAL13387.1;gbkey=CDS;product=putative sugar transporter;protein_id=CAL13387.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3670101	3670154	.	+	.	ID=id5943;Note=10 probable transmembrane helices predicted for YE3358 by TMHMM2.0 at aa 20-37%2C 79-101%2C 147-169%2C 173-195%2C240-262%2C 277-299%2C 312-334%2C 339-361%2C 374-396 and 406-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	3670278	3670346	.	+	.	ID=id5943;Note=10 probable transmembrane helices predicted for YE3358 by TMHMM2.0 at aa 20-37%2C 79-101%2C 147-169%2C 173-195%2C240-262%2C 277-299%2C 312-334%2C 339-361%2C 374-396 and 406-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	3670482	3670550	.	+	.	ID=id5943;Note=10 probable transmembrane helices predicted for YE3358 by TMHMM2.0 at aa 20-37%2C 79-101%2C 147-169%2C 173-195%2C240-262%2C 277-299%2C 312-334%2C 339-361%2C 374-396 and 406-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	3670560	3670628	.	+	.	ID=id5943;Note=10 probable transmembrane helices predicted for YE3358 by TMHMM2.0 at aa 20-37%2C 79-101%2C 147-169%2C 173-195%2C240-262%2C 277-299%2C 312-334%2C 339-361%2C 374-396 and 406-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	3670761	3670829	.	+	.	ID=id5943;Note=10 probable transmembrane helices predicted for YE3358 by TMHMM2.0 at aa 20-37%2C 79-101%2C 147-169%2C 173-195%2C240-262%2C 277-299%2C 312-334%2C 339-361%2C 374-396 and 406-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	3670872	3670940	.	+	.	ID=id5943;Note=10 probable transmembrane helices predicted for YE3358 by TMHMM2.0 at aa 20-37%2C 79-101%2C 147-169%2C 173-195%2C240-262%2C 277-299%2C 312-334%2C 339-361%2C 374-396 and 406-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	3670977	3671045	.	+	.	ID=id5943;Note=10 probable transmembrane helices predicted for YE3358 by TMHMM2.0 at aa 20-37%2C 79-101%2C 147-169%2C 173-195%2C240-262%2C 277-299%2C 312-334%2C 339-361%2C 374-396 and 406-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	3671058	3671126	.	+	.	ID=id5943;Note=10 probable transmembrane helices predicted for YE3358 by TMHMM2.0 at aa 20-37%2C 79-101%2C 147-169%2C 173-195%2C240-262%2C 277-299%2C 312-334%2C 339-361%2C 374-396 and 406-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	3671163	3671231	.	+	.	ID=id5943;Note=10 probable transmembrane helices predicted for YE3358 by TMHMM2.0 at aa 20-37%2C 79-101%2C 147-169%2C 173-195%2C240-262%2C 277-299%2C 312-334%2C 339-361%2C 374-396 and 406-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3671259	3671318	.	+	.	ID=id5943;Note=10 probable transmembrane helices predicted for YE3358 by TMHMM2.0 at aa 20-37%2C 79-101%2C 147-169%2C 173-195%2C240-262%2C 277-299%2C 312-334%2C 339-361%2C 374-396 and 406-425;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	3670110	3671348	.	+	.	ID=id5944;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -82.9%2C E-value 6.4e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	3671378	3673753	.	+	.	ID=gene3314;Name=YE3359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3359
AM286415.1	EMBL	CDS	3671378	3673753	.	+	0	ID=cds3218;Parent=gene3314;Dbxref=EnsemblGenomes-Gn:YE3359,EnsemblGenomes-Tr:CAL13388,GOA:A1JPI6,InterPro:IPR000322,InterPro:IPR011013,InterPro:IPR017853,InterPro:IPR025887,UniProtKB/TrEMBL:A1JPI6,NCBI_GP:CAL13388.1;Name=CAL13388.1;gbkey=CDS;product=putative glucosidase;protein_id=CAL13388.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3671561	3673705	.	+	.	ID=id5945;Note=Pfam match to entry PF01055 Glyco_hydro_31%2CGlycosyl hydrolases family 31%2C score 157.2%2C E-value 1.8e-44;gbkey=misc_feature;inference=protein motif:PFAM:PF01055
AM286415.1	EMBL	sequence_feature	3671870	3671914	.	+	.	ID=id5946;Note=PS00066 Hydroxymethylglutaryl-coenzyme A reductases signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00066
AM286415.1	EMBL	gene	3673831	3674247	.	-	.	ID=gene3315;Name=YE3360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3360
AM286415.1	EMBL	CDS	3673831	3674247	.	-	0	ID=cds3219;Parent=gene3315;Dbxref=EnsemblGenomes-Gn:YE3360,EnsemblGenomes-Tr:CAL13389,InterPro:IPR017021,InterPro:IPR018988,InterPro:IPR023476,UniProtKB/TrEMBL:A1JPI8,NCBI_GP:CAL13389.1;Name=CAL13389.1;Note=Weakly similar to several including: Rhizobium loti hypothetical protein Mlr5159 SWALL:Q98CG5 (EMBL:AP003005) (135 aa) fasta scores: E(): 0.013%2C 28.46 38d in 137 aa and to Clostridium acetobutylicum hypothetical protein Cac1073 SWALL:Q97K48 (EMBL:AE007622) (152 aa) fasta scores: E(): 0.38%2C 28.05 38d in 139 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP003005;product=conserved hypothetical protein;protein_id=CAL13389.1;transl_table=11
AM286415.1	EMBL	gene	3674381	3674851	.	+	.	ID=gene3316;Name=YE3361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3361
AM286415.1	EMBL	CDS	3674381	3674851	.	+	0	ID=cds3220;Parent=gene3316;Dbxref=EnsemblGenomes-Gn:YE3361,EnsemblGenomes-Tr:CAL13390,GOA:A1JPI9,InterPro:IPR000485,InterPro:IPR011008,InterPro:IPR011991,InterPro:IPR019887,InterPro:IPR019888,UniProtKB/TrEMBL:A1JPI9,NCBI_GP:CAL13390.1;Name=CAL13390.1;Note=Similar to Pseudomonas putida LRP-family transcriptional regulators MdeR SWALL:O33467 (EMBL:D89015) (159 aa) fasta scores: E(): 5.1e-25%2C 43.87 38d in 155 aa%2CPseudomonas aeruginosa probable transcriptional regulator pa4508 SWALL:Q9HVR3 (EMBL:AE004864) (157 aa) fasta scores: E(): 7.7e-22%2C 41.78 38d in 146 aa and to Rhizobium loti transcriptional regulator Mll4830 SWALL:Q98D73 (EMBL:AP003005) (158 aa) fasta scores: E(): 6.3e-19%2C39.04 38d in 146 aa;gbkey=CDS;inference=similar to sequence:INSDC:D89015;product=putative AsnC-family transcriptional regulator;protein_id=CAL13390.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3674468	3674779	.	+	.	ID=id5947;Note=Pfam match to entry PF01037 ASNC_trans_reg%2C AsnC family%2C score 117.9%2C E-value 1.2e-32;gbkey=misc_feature;inference=protein motif:PFAM:PF01037
AM286415.1	EMBL	gene	3675083	3676327	.	-	.	ID=gene3317;Name=YE3362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3362
AM286415.1	EMBL	CDS	3675083	3676327	.	-	0	ID=cds3221;Parent=gene3317;Dbxref=EnsemblGenomes-Gn:YE3362,EnsemblGenomes-Tr:CAL13391,GOA:A1JPJ0,InterPro:IPR000014,InterPro:IPR000160,InterPro:IPR001610,InterPro:IPR013656,InterPro:IPR029787,UniProtKB/TrEMBL:A1JPJ0,NCBI_GP:CAL13391.1;Name=CAL13391.1;Note=Similar to Escherichia coli hypothetical protein YdaM or b1341 SWALL:YDAM_ECOLI (SWALL:P77302) (430 aa) fasta scores: E(): 8.4e-90%2C 53.38 38d in 414 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77302;product=conserved hypothetical protein;protein_id=CAL13391.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3675098	3675571	.	-	.	ID=id5948;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 215.0%2C E-value 7.2e-62;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	3675590	3675685	.	-	.	ID=id5949;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 16.6%2C E-value 0.00035;gbkey=misc_feature;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	3675791	3675931	.	-	.	ID=id5950;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 27.0%2C E-value 4.8e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	gene	3676410	3676805	.	-	.	ID=gene3318;Name=YE3363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3363
AM286415.1	EMBL	CDS	3676410	3676805	.	-	0	ID=cds3222;Parent=gene3318;Dbxref=EnsemblGenomes-Gn:YE3363,EnsemblGenomes-Tr:CAL13392,InterPro:IPR011944,UniProtKB/TrEMBL:A1JPJ2,NCBI_GP:CAL13392.1;Name=CAL13392.1;Note=Similar to several proteins of undefined function including: Bacillus subtilis hypothetical protein YybH SWALL:YYBH_BACSU (SWALL:P37496) (129 aa) fasta scores: E(): 3.2e-20%2C 46.82 38d in 126 aa and to Pseudomonas aeruginosa hypothetical protein Pa1325 SWALL:Q9I419 (EMBL:AE004562) (135 aa) fasta scores: E(): 2.1e-16%2C44.96 38d in 129 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37496;product=conserved hypothetical protein;protein_id=CAL13392.1;transl_table=11
AM286415.1	EMBL	gene	3677085	3677510	.	-	.	ID=gene3319;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=YE3364
AM286415.1	EMBL	CDS	3677085	3677510	.	-	0	ID=cds3223;Parent=gene3319;Dbxref=EnsemblGenomes-Gn:YE3364,EnsemblGenomes-Tr:CAL13393,GOA:A1JPJ3,InterPro:IPR006659,InterPro:IPR006660,InterPro:IPR012336,UniProtKB/TrEMBL:A1JPJ3,NCBI_GP:CAL13393.1;Name=CAL13393.1;Note=Similar to Escherichia coli arsenate reductase ArsC or ArsG or b3503 SWALL:ARSC_ECOLI (SWALL:P37311) (141 aa) fasta scores: E(): 1.6e-47%2C 85.81 38d in 141 aa and to Acidiphilium multivorum arsenate reductase ArsC SWALL:ARSC_ACIMU (SWALL:O50595) (141 aa) fasta scores: E(): 7.7e-47%2C 84.39 38d in 141 aa;gbkey=CDS;gene=arsC;inference=similar to sequence:UniProtKB:P37311;product=arsenate reductase;protein_id=CAL13393.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3677172	3677456	.	-	.	ID=id5951;Note=Pfam match to entry PF03960 ArsC%2C ArsC family %2Cscore 107.7%2C E-value 1.5e-29;gbkey=misc_feature;gene=arsC;inference=protein motif:PFAM:PF03960
AM286415.1	EMBL	gene	3677524	3678813	.	-	.	ID=gene3320;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;gene_synonym=arsF;locus_tag=YE3365
AM286415.1	EMBL	CDS	3677524	3678813	.	-	0	ID=cds3224;Parent=gene3320;Dbxref=EnsemblGenomes-Gn:YE3365,EnsemblGenomes-Tr:CAL13394,GOA:A1JPJ4,InterPro:IPR000802,UniProtKB/TrEMBL:A1JPJ4,NCBI_GP:CAL13394.1;Name=CAL13394.1;gbkey=CDS;gene=arsB;product=arsenical pump membrane protein;protein_id=CAL13394.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3677539	3678807	.	-	.	ID=id5952;Note=Pfam match to entry PF02040 ArsB%2C Arsenical pump membrane protein%2C score 1101.5%2C E-value 0;gbkey=misc_feature;gene=arsB;inference=protein motif:PFAM:PF02040
AM286415.1	EMBL	sequence_feature	3678685	3678753	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	3678604	3678672	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	3678484	3678543	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	3678421	3678474	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	3678334	3678402	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	3678223	3678291	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	3678091	3678144	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	3678028	3678081	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	3677926	3677994	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	3677809	3677868	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	3677545	3677613	.	-	.	ID=id5953;Note=11 probable transmembrane helices predicted for YE3365 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	3679048	3679398	.	-	.	ID=gene3321;Name=arsR;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=YE3366
AM286415.1	EMBL	CDS	3679048	3679398	.	-	0	ID=cds3225;Parent=gene3321;Dbxref=EnsemblGenomes-Gn:YE3366,EnsemblGenomes-Tr:CAL13395,GOA:A1JPJ6,InterPro:IPR001845,InterPro:IPR011991,InterPro:IPR018334,UniProtKB/TrEMBL:A1JPJ6,NCBI_GP:CAL13395.1;Name=CAL13395.1;Note=Similar to Escherichia coli arsenical resistance operon repressor ArsR SWALL:ARR1_ECOLI (SWALL:P15905) (117 aa) fasta scores: E(): 6.9e-42%2C 89.65 38d in 116 aa and to Salmonella typhimurium ArsR protein ArsR SWALL:BAB91569 (EMBL:AP005147) (117 aa) fasta scores: E(): 6.9e-42%2C89.65 38d in 116 aa;gbkey=CDS;gene=arsR;inference=similar to sequence:UniProtKB:P15905;product=arsenical resistance operon repressor;protein_id=CAL13395.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3679138	3679338	.	-	.	ID=id5954;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 65.0%2C E-value 1.1e-16;gbkey=misc_feature;gene=arsR;inference=protein motif:PFAM:PF01022
AM286415.1	EMBL	sequence_feature	3679252	3679308	.	-	.	ID=id5955;Note=PS00846 Bacterial regulatory proteins%2C arsR family signature.;gbkey=misc_feature;gene=arsR;inference=protein motif:Prosite:PS00846
AM286415.1	EMBL	gene	3679643	3680785	.	-	.	ID=gene3322;Name=YE3367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3367
AM286415.1	EMBL	CDS	3679643	3680785	.	-	0	ID=cds3226;Parent=gene3322;Dbxref=EnsemblGenomes-Gn:YE3367,EnsemblGenomes-Tr:CAL13396,InterPro:IPR003812,UniProtKB/TrEMBL:A1JPJ7,NCBI_GP:CAL13396.1;Name=CAL13396.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13396.1;transl_table=11
AM286415.1	EMBL	gene	3681131	3681565	.	+	.	ID=gene3323;Name=YE3368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3368
AM286415.1	EMBL	CDS	3681131	3681565	.	+	0	ID=cds3227;Parent=gene3323;Dbxref=EnsemblGenomes-Gn:YE3368,EnsemblGenomes-Tr:CAL13397,UniProtKB/TrEMBL:A1JPJ9,NCBI_GP:CAL13397.1;Name=CAL13397.1;Note=The predicted product of this CDS encompasses two CDS previously published from Yersinia pestis. The N-terminus%2C to codon 78%2C is similar to Yersinia pestis hypothetical protein Ypo0876 ypo0876 SWALL:Q8ZHL5 (EMBL:AJ414145) (78 aa) fasta scores: E(): 1.3e-24%2C 93.59 id in 78 aa%2C and to Yersinia pestis KIM hypothetical y3258 SWALL:AAM86808 (EMBL:AE013927) (78 aa) fasta scores: E(): 1.3e-24%2C 93.59 38d in 78 aa%2C and the C-terminus%2C from codon 118%2C is similar to Yersinia pestis KIM hypothetical y3259 SWALL:AAM86809 (EMBL:AE013927) (110 aa) fasta scores: E(): 4.7e-06%2C 53.12 38d in 96 aa%2C and to Yersinia pestis hypothetical protein Ypo0877 ypo0877 SWALL:Q8ZHL4 (EMBL:AJ414145) (110 aa) fasta scores: E(): 4.7e-06%2C53.12 38d in 96 aa.;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=conserved hypothetical protein;protein_id=CAL13397.1;transl_table=11
AM286415.1	EMBL	gene	3681558	3681698	.	+	.	ID=gene3324;Name=YE3369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3369
AM286415.1	EMBL	CDS	3681558	3681698	.	+	0	ID=cds3228;Parent=gene3324;Dbxref=EnsemblGenomes-Gn:YE3369,EnsemblGenomes-Tr:CAL13398,UniProtKB/TrEMBL:A1JPK0,NCBI_GP:CAL13398.1;Name=CAL13398.1;Note=doubtful CDS;gbkey=CDS;product=hypothetical protein;protein_id=CAL13398.1;transl_table=11
AM286415.1	EMBL	gene	3682136	3682477	.	-	.	ID=gene3325;Name=YE3370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3370
AM286415.1	EMBL	CDS	3682136	3682477	.	-	0	ID=cds3229;Parent=gene3325;Dbxref=EnsemblGenomes-Gn:YE3370,EnsemblGenomes-Tr:CAL13399,UniProtKB/TrEMBL:A1JPK1,NCBI_GP:CAL13399.1;Name=CAL13399.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=putative inner membrane protein;protein_id=CAL13399.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3682355	3682423	.	-	.	ID=id5956;Note=3 probable transmembrane helices predicted for YE3370 by TMHMM2.0 at aa 19-41%2C 56-78 and 85-107;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3682244	3682312	.	-	.	ID=id5956;Note=3 probable transmembrane helices predicted for YE3370 by TMHMM2.0 at aa 19-41%2C 56-78 and 85-107;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3682157	3682225	.	-	.	ID=id5956;Note=3 probable transmembrane helices predicted for YE3370 by TMHMM2.0 at aa 19-41%2C 56-78 and 85-107;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3682624	3683301	.	-	.	ID=gene3326;Name=YE3371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3371
AM286415.1	EMBL	CDS	3682624	3683301	.	-	0	ID=cds3230;Parent=gene3326;Dbxref=EnsemblGenomes-Gn:YE3371,EnsemblGenomes-Tr:CAL13400,InterPro:IPR014054,UniProtKB/TrEMBL:A1JPK2,NCBI_GP:CAL13400.1;Name=CAL13400.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL13400.1;transl_table=11
AM286415.1	EMBL	gene	3684016	3685632	.	-	.	ID=gene3327;Name=YE3373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3373
AM286415.1	EMBL	CDS	3684016	3685632	.	-	0	ID=cds3231;Parent=gene3327;Dbxref=EnsemblGenomes-Gn:YE3373,EnsemblGenomes-Tr:CAL13401,GOA:A1JPK3,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB/TrEMBL:A1JPK3,NCBI_GP:CAL13401.1;Name=CAL13401.1;Note=Similar to several including: Salmonella typhi possible integrase Sty3193 SWALL:Q8Z3Y1 (EMBL:AL627277) (548 aa) fasta scores: E(): 8e-139%2C 70.76 38d in 537 aa and to Rhizobium meliloti putative integrase/resolvase recombinase protein R00600 or Smc02297 SWALL:Q92S32 (EMBL:AL591784) (513 aa) fasta scores: E(): 3e-10%2C 26.57 id in 380 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627277;product=putative integrase;protein_id=CAL13401.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3684058	3684654	.	-	.	ID=id5957;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 39.2%2C E-value 6e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	sequence_feature	3684433	3684456	.	-	.	ID=id5958;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3685747	3685820	.	-	.	ID=gene3328;Name=tRNA-Gly (CCC);gbkey=Gene;gene=tRNA-Gly (CCC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3685747	3685820	.	-	.	ID=rna127;Parent=gene3328;gbkey=tRNA;gene=tRNA-Gly (CCC);product=tRNA-Gly
AM286415.1	EMBL	exon	3685747	3685820	.	-	.	ID=id5959;Parent=rna127;gbkey=tRNA;gene=tRNA-Gly (CCC);product=tRNA-Gly
AM286415.1	EMBL	gene	3686176	3687693	.	-	.	ID=gene3329;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;gene_synonym=asuD,herC;locus_tag=YE3374
AM286415.1	EMBL	CDS	3686176	3687693	.	-	0	ID=cds3232;Parent=gene3329;Dbxref=EnsemblGenomes-Gn:YE3374,EnsemblGenomes-Tr:CAL13402,GOA:A1JPL4,InterPro:IPR002313,InterPro:IPR004364,InterPro:IPR004365,InterPro:IPR006195,InterPro:IPR012340,InterPro:IPR018149,InterPro:IPR018150,NCBI_GP:CAL13402.1;Name=CAL13402.1;gbkey=CDS;gene=lysS;product=lysyl-tRNA synthetase;protein_id=CAL13402.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3686185	3687210	.	-	.	ID=id5960;Note=Pfam match to entry PF00152 tRNA-synt_2%2C tRNA synthetases class II (D%2C K and N)%2C score 663.6%2C E-value 6.8e-197;gbkey=misc_feature;gene=lysS;inference=protein motif:PFAM:PF00152
AM286415.1	EMBL	sequence_feature	3686239	3686268	.	-	.	ID=id5961;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=lysS;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	3686857	3686910	.	-	.	ID=id5962;Note=PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.;gbkey=misc_feature;gene=lysS;inference=protein motif:Prosite:PS00179
AM286415.1	EMBL	sequence_feature	3687256	3687492	.	-	.	ID=id5963;Note=Pfam match to entry PF01336 tRNA_anti%2C OB-fold nucleic acid binding domain%2C score 86.7%2C E-value 3.1e-23;gbkey=misc_feature;gene=lysS;inference=protein motif:PFAM:PF01336
AM286415.1	EMBL	gene	3688727	3688801	.	-	.	ID=gene3330;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;gene_synonym=supK;is_ordered=true;locus_tag=YE3376;part=1/2
AM286415.1	EMBL	gene	3687703	3688725	.	-	.	ID=gene3330;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;gene_synonym=supK;is_ordered=true;locus_tag=YE3376;part=2/2
AM286415.1	EMBL	CDS	3688727	3688801	.	-	0	ID=cds3233;Parent=gene3330;Dbxref=EnsemblGenomes-Gn:YE3376,EnsemblGenomes-Tr:CAL13403,GOA:A1JPL5,InterPro:IPR000352,InterPro:IPR004374,InterPro:IPR005139,InterPro:IPR014720,InterPro:IPR020853,NCBI_GP:CAL13403.1;Name=CAL13403.1;Note=Similar to Escherichia coli peptide chain release factor 2 PrfB or SupK or b2891 SWALL:RF2_ECOLI (SWALL:P07012) (365 aa) fasta scores: E(): 7.7e-125%2C89.04 38d in 365 aa%2C Yersinia pestis peptide chain release factor 2 PrfB or Ypo0889 or Y3273 SWALL:Q8ZHK4 (EMBL:AJ414145) (366 aa) fasta scores: E(): 8.8e-133%2C95.35 38d in 366 aa and to Salmonella typhimurium%2C and Salmonella typhi peptide chain release factor 2 PrfB or Stm3041 or Sty3197 SWALL:RF2_SALTY (SWALL:P28353) (365 aa) fasta scores: E(): 2.2e-125%2C 89.58 38d in 365 aa. Contains an in-frame premature opal (UGA) termination codon (following codon 25) followed by a frameshift. Orthologues also contain a nonsense mutation and a frameshift. Autogenous suppression of the nonsense mutation has been shown in the E. coli and S. typhimurium.;gbkey=CDS;gene=prfB;inference=similar to sequence:UniProtKB:P28353;product=peptide chain release factor 2;protein_id=CAL13403.1;transl_table=11
AM286415.1	EMBL	CDS	3687703	3688725	.	-	0	ID=cds3233;Parent=gene3330;Dbxref=EnsemblGenomes-Gn:YE3376,EnsemblGenomes-Tr:CAL13403,GOA:A1JPL5,InterPro:IPR000352,InterPro:IPR004374,InterPro:IPR005139,InterPro:IPR014720,InterPro:IPR020853,NCBI_GP:CAL13403.1;Name=CAL13403.1;Note=Similar to Escherichia coli peptide chain release factor 2 PrfB or SupK or b2891 SWALL:RF2_ECOLI (SWALL:P07012) (365 aa) fasta scores: E(): 7.7e-125%2C89.04 38d in 365 aa%2C Yersinia pestis peptide chain release factor 2 PrfB or Ypo0889 or Y3273 SWALL:Q8ZHK4 (EMBL:AJ414145) (366 aa) fasta scores: E(): 8.8e-133%2C95.35 38d in 366 aa and to Salmonella typhimurium%2C and Salmonella typhi peptide chain release factor 2 PrfB or Stm3041 or Sty3197 SWALL:RF2_SALTY (SWALL:P28353) (365 aa) fasta scores: E(): 2.2e-125%2C 89.58 38d in 365 aa. Contains an in-frame premature opal (UGA) termination codon (following codon 25) followed by a frameshift. Orthologues also contain a nonsense mutation and a frameshift. Autogenous suppression of the nonsense mutation has been shown in the E. coli and S. typhimurium.;gbkey=CDS;gene=prfB;inference=similar to sequence:UniProtKB:P28353;product=peptide chain release factor 2;protein_id=CAL13403.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3687790	3688128	.	-	.	ID=id5964;Note=Pfam match to entry PF00472 RF-1%2C Peptidyl-tRNA hydrolase domain%2C score 239.6%2C E-value 2.8e-69;gbkey=misc_feature;gene=prfB;inference=protein motif:PFAM:PF00472
AM286415.1	EMBL	sequence_feature	3688018	3688068	.	-	.	ID=id5965;Note=PS00745 Prokaryotic-type class I peptide chain release factors signature.;gbkey=misc_feature;gene=prfB;inference=protein motif:Prosite:PS00745
AM286415.1	EMBL	sequence_feature	3688216	3688548	.	-	.	ID=id5966;Note=Pfam match to entry PF03462 PCRF%2C PCRF domain %2Cscore 199.1%2C E-value 4.5e-57;gbkey=misc_feature;gene=prfB;inference=protein motif:PFAM:PF03462
AM286415.1	EMBL	gene	3689253	3690986	.	-	.	ID=gene3331;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=YE3378
AM286415.1	EMBL	CDS	3689253	3690986	.	-	0	ID=cds3234;Parent=gene3331;Dbxref=EnsemblGenomes-Gn:YE3378,EnsemblGenomes-Tr:CAL13404,GOA:A1JPL7,InterPro:IPR001667,InterPro:IPR003156,InterPro:IPR004610,UniProtKB/TrEMBL:A1JPL7,NCBI_GP:CAL13404.1;Name=CAL13404.1;gbkey=CDS;gene=recJ;product=single-stranded-DNA-specific exonuclease;protein_id=CAL13404.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3689634	3689843	.	-	.	ID=id5967;Note=Pfam match to entry PF02272 DHHA1%2C DHHA1 domain %2Cscore 66.0%2C E-value 5.2e-17;gbkey=misc_feature;gene=recJ;inference=protein motif:PFAM:PF02272
AM286415.1	EMBL	sequence_feature	3690270	3690788	.	-	.	ID=id5968;Note=Pfam match to entry PF01368 DHH%2C DHH family%2C score 193.9%2C E-value 1.7e-55;gbkey=misc_feature;gene=recJ;inference=protein motif:PFAM:PF01368
AM286415.1	EMBL	gene	3690993	3691709	.	-	.	ID=gene3332;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=YE3379
AM286415.1	EMBL	CDS	3690993	3691709	.	-	0	ID=cds3235;Parent=gene3332;Dbxref=EnsemblGenomes-Gn:YE3379,EnsemblGenomes-Tr:CAL13405,GOA:A1JPL8,InterPro:IPR009094,InterPro:IPR012336,InterPro:IPR017937,InterPro:IPR018950,UniProtKB/TrEMBL:A1JPL8,NCBI_GP:CAL13405.1;Name=CAL13405.1;gbkey=CDS;gene=dsbC;product=thiol:disulfide interchange protein (DsbC);protein_id=CAL13405.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3691323	3691379	.	-	.	ID=id5969;Note=PS00194 Thioredoxin family active site.;gbkey=misc_feature;gene=dsbC;inference=protein motif:Prosite:PS00194
AM286415.1	EMBL	sequence_feature	3691338	3691355	.	-	.	ID=id5970;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=dsbC;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	3691758	3692657	.	-	.	ID=gene3333;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=YE3380
AM286415.1	EMBL	CDS	3691758	3692657	.	-	0	ID=cds3236;Parent=gene3333;Dbxref=EnsemblGenomes-Gn:YE3380,EnsemblGenomes-Tr:CAL13406,GOA:A1JPM0,InterPro:IPR002104,InterPro:IPR004107,InterPro:IPR010998,InterPro:IPR011010,InterPro:IPR011932,InterPro:IPR013762,InterPro:IPR023009,InterPro:IPR023109,UniProtKB/TrEMBL:A1JPM0,NCBI_GP:CAL13406.1;Name=CAL13406.1;gbkey=CDS;gene=xerD;product=integrase/recombinase;protein_id=CAL13406.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3691788	3692318	.	-	.	ID=id5971;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 250.4%2C E-value 1.6e-72;gbkey=misc_feature;gene=xerD;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	sequence_feature	3692382	3692639	.	-	.	ID=id5972;Note=Pfam match to entry PF02899 Phage_integr_N%2C Phage integrase%2C N-terminal SAM-like domain%2C score 111.4%2CE-value 1.1e-30;gbkey=misc_feature;gene=xerD;inference=protein motif:PFAM:PF02899
AM286415.1	EMBL	gene	3692763	3693284	.	+	.	ID=gene3334;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=YE3381
AM286415.1	EMBL	CDS	3692763	3693284	.	+	0	ID=cds3237;Parent=gene3334;Dbxref=EnsemblGenomes-Gn:YE3381,EnsemblGenomes-Tr:CAL13407,GOA:A1JPM1,InterPro:IPR001226,InterPro:IPR008254,InterPro:IPR010086,InterPro:IPR029039,UniProtKB/TrEMBL:A1JPM1,NCBI_GP:CAL13407.1;Name=CAL13407.1;gbkey=CDS;gene=fldB;product=flavodoxin 2;protein_id=CAL13407.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3692766	3693269	.	+	.	ID=id5973;Note=Pfam match to entry PF00258 flavodoxin%2C Flavodoxin%2C score 140.8%2C E-value 1.6e-39;gbkey=misc_feature;gene=fldB;inference=protein motif:PFAM:PF00258
AM286415.1	EMBL	sequence_feature	3692775	3692825	.	+	.	ID=id5974;Note=PS00201 Flavodoxin signature.;gbkey=misc_feature;gene=fldB;inference=protein motif:Prosite:PS00201
AM286415.1	EMBL	gene	3693343	3694764	.	-	.	ID=gene3335;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=YE3382
AM286415.1	EMBL	CDS	3693343	3694764	.	-	0	ID=cds3238;Parent=gene3335;Dbxref=EnsemblGenomes-Gn:YE3382,EnsemblGenomes-Tr:CAL13408,InterPro:IPR010364,UniProtKB/TrEMBL:A1JPM2,NCBI_GP:CAL13408.1;Name=CAL13408.1;gbkey=CDS;gene=creD;product=putative membrane protein;protein_id=CAL13408.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3694699	3694752	.	-	.	ID=id5975;Note=6 probable transmembrane helices predicted for YE3382 by TMHMM2.0 at aa 5-22%2C 296-314%2C 327-344%2C 348-370%2C375-397 and 402-421;gbkey=misc_feature;gene=creD;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3693823	3693879	.	-	.	ID=id5975;Note=6 probable transmembrane helices predicted for YE3382 by TMHMM2.0 at aa 5-22%2C 296-314%2C 327-344%2C 348-370%2C375-397 and 402-421;gbkey=misc_feature;gene=creD;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3693733	3693786	.	-	.	ID=id5975;Note=6 probable transmembrane helices predicted for YE3382 by TMHMM2.0 at aa 5-22%2C 296-314%2C 327-344%2C 348-370%2C375-397 and 402-421;gbkey=misc_feature;gene=creD;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3693655	3693723	.	-	.	ID=id5975;Note=6 probable transmembrane helices predicted for YE3382 by TMHMM2.0 at aa 5-22%2C 296-314%2C 327-344%2C 348-370%2C375-397 and 402-421;gbkey=misc_feature;gene=creD;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3693574	3693642	.	-	.	ID=id5975;Note=6 probable transmembrane helices predicted for YE3382 by TMHMM2.0 at aa 5-22%2C 296-314%2C 327-344%2C 348-370%2C375-397 and 402-421;gbkey=misc_feature;gene=creD;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3693502	3693561	.	-	.	ID=id5975;Note=6 probable transmembrane helices predicted for YE3382 by TMHMM2.0 at aa 5-22%2C 296-314%2C 327-344%2C 348-370%2C375-397 and 402-421;gbkey=misc_feature;gene=creD;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	3693682	3693714	.	-	.	ID=id5976;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=creD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3694856	3696283	.	-	.	ID=gene3336;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;gene_synonym=phoM,sasS;locus_tag=YE3383
AM286415.1	EMBL	CDS	3694856	3696283	.	-	0	ID=cds3239;Parent=gene3336;Dbxref=EnsemblGenomes-Gn:YE3383,EnsemblGenomes-Tr:CAL13409,GOA:A1JPM3,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR029150,InterPro:IPR029151,UniProtKB/TrEMBL:A1JPM3,NCBI_GP:CAL13409.1;Name=CAL13409.1;gbkey=CDS;gene=creC;product=putative histidine kinase sensor;protein_id=CAL13409.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3694865	3695194	.	-	.	ID=id5977;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 131.0%2C E-value 1.4e-36;gbkey=misc_feature;gene=creC;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	3695324	3695521	.	-	.	ID=id5978;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 61.5%2C E-value 1.2e-15;gbkey=misc_feature;gene=creC;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	3695528	3695734	.	-	.	ID=id5979;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 42.9%2C E-value 4.8e-10;gbkey=misc_feature;gene=creC;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	3696203	3696271	.	-	.	ID=id5980;Note=2 probable transmembrane helices predicted for YE3383 by TMHMM2.0 at aa 5-27 and 184-206;gbkey=misc_feature;gene=creC;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3695666	3695734	.	-	.	ID=id5980;Note=2 probable transmembrane helices predicted for YE3383 by TMHMM2.0 at aa 5-27 and 184-206;gbkey=misc_feature;gene=creC;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	3696294	3696992	.	-	.	ID=gene3337;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;gene_synonym=blrA;locus_tag=YE3384
AM286415.1	EMBL	CDS	3696294	3696992	.	-	0	ID=cds3240;Parent=gene3337;Dbxref=EnsemblGenomes-Gn:YE3384,EnsemblGenomes-Tr:CAL13410,GOA:A1JPM5,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JPM5,NCBI_GP:CAL13410.1;Name=CAL13410.1;gbkey=CDS;gene=creB;product=putative response regulator;protein_id=CAL13410.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3696318	3696536	.	-	.	ID=id5981;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 100.6%2C E-value 2e-27;gbkey=misc_feature;gene=creB;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	sequence_feature	3696627	3696986	.	-	.	ID=id5982;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 112.2%2C E-value 6.5e-31;gbkey=misc_feature;gene=creB;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	3696992	3697417	.	-	.	ID=gene3338;Name=YE3385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3385
AM286415.1	EMBL	CDS	3696992	3697417	.	-	0	ID=cds3241;Parent=gene3338;Dbxref=EnsemblGenomes-Gn:YE3385,EnsemblGenomes-Tr:CAL13411,InterPro:IPR009883,UniProtKB/TrEMBL:A1JPM6,NCBI_GP:CAL13411.1;Name=CAL13411.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13411.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3697316	3697384	.	-	.	ID=id5983;Note=2 probable transmembrane helices predicted for YE3385 by TMHMM2.0 at aa 12-34 and 38-55;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3697253	3697306	.	-	.	ID=id5983;Note=2 probable transmembrane helices predicted for YE3385 by TMHMM2.0 at aa 12-34 and 38-55;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	3697398	3697664	.	-	.	ID=gene3339;Name=YE3386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3386
AM286415.1	EMBL	CDS	3697398	3697664	.	-	0	ID=cds3242;Parent=gene3339;Dbxref=EnsemblGenomes-Gn:YE3386,EnsemblGenomes-Tr:CAL13412,InterPro:IPR005631,UniProtKB/TrEMBL:A1JPM7,NCBI_GP:CAL13412.1;Name=CAL13412.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13412.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3697419	3697664	.	-	.	ID=id5984;Note=Pfam match to entry PF03937 DUF339%2C Domain of unknown function (DUF339)%2C score 136.6%2C E-value 2.8e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF03937
AM286415.1	EMBL	gene	3698059	3699051	.	+	.	ID=gene3340;Name=YE3387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3387
AM286415.1	EMBL	CDS	3698059	3699051	.	+	0	ID=cds3243;Parent=gene3340;Dbxref=EnsemblGenomes-Gn:YE3387,EnsemblGenomes-Tr:CAL13413,GOA:A1JPM8,InterPro:IPR006222,InterPro:IPR017703,InterPro:IPR023758,InterPro:IPR029043,NCBI_GP:CAL13413.1;Name=CAL13413.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13413.1;transl_table=11
AM286415.1	EMBL	gene	3699105	3699677	.	-	.	ID=gene3341;Name=YE3388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3388
AM286415.1	EMBL	CDS	3699105	3699677	.	-	0	ID=cds3244;Parent=gene3341;Dbxref=EnsemblGenomes-Gn:YE3388,EnsemblGenomes-Tr:CAL13414,GOA:A1JPM9,InterPro:IPR004254,InterPro:IPR005744,UniProtKB/TrEMBL:A1JPM9,NCBI_GP:CAL13414.1;Name=CAL13414.1;gbkey=CDS;product=putative hemolysin III;protein_id=CAL13414.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3699531	3699599	.	-	.	ID=id5985;Note=6 probable transmembrane helices predicted for YE3388 by TMHMM2.0 at aa 27-49%2C 62-81%2C 86-108%2C 113-135%2C139-161 and 166-188;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3699435	3699494	.	-	.	ID=id5985;Note=6 probable transmembrane helices predicted for YE3388 by TMHMM2.0 at aa 27-49%2C 62-81%2C 86-108%2C 113-135%2C139-161 and 166-188;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3699354	3699422	.	-	.	ID=id5985;Note=6 probable transmembrane helices predicted for YE3388 by TMHMM2.0 at aa 27-49%2C 62-81%2C 86-108%2C 113-135%2C139-161 and 166-188;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3699273	3699341	.	-	.	ID=id5985;Note=6 probable transmembrane helices predicted for YE3388 by TMHMM2.0 at aa 27-49%2C 62-81%2C 86-108%2C 113-135%2C139-161 and 166-188;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3699195	3699263	.	-	.	ID=id5985;Note=6 probable transmembrane helices predicted for YE3388 by TMHMM2.0 at aa 27-49%2C 62-81%2C 86-108%2C 113-135%2C139-161 and 166-188;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3699114	3699182	.	-	.	ID=id5985;Note=6 probable transmembrane helices predicted for YE3388 by TMHMM2.0 at aa 27-49%2C 62-81%2C 86-108%2C 113-135%2C139-161 and 166-188;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	3699117	3699677	.	-	.	ID=id5986;Note=Pfam match to entry PF03006 UPF0073%2CUncharacterised protein family (Hly-III / UPF0073)%2C score -91.5%2C E-value 0.00077;gbkey=misc_feature;inference=protein motif:PFAM:PF03006
AM286415.1	EMBL	gene	3700019	3700621	.	+	.	ID=gene3342;Name=YE3389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3389
AM286415.1	EMBL	CDS	3700019	3700621	.	+	0	ID=cds3245;Parent=gene3342;Dbxref=EnsemblGenomes-Gn:YE3389,EnsemblGenomes-Tr:CAL13415,InterPro:IPR003607,InterPro:IPR006674,UniProtKB/TrEMBL:A1JPN0,NCBI_GP:CAL13415.1;Name=CAL13415.1;Note=Similar to several of undefined function e.g. Deinococcus radiodurans hypothetical protein Dr0704 SWALL:Q9RWG4 (EMBL:AE001927) (198 aa) fasta scores: E(): 5.8e-22%2C 39.08 38d in 197 aa and Halobacterium sp. ygl101w SWALL:O52019 (EMBL:AF016485) (203 aa) fasta scores: E(): 2.2e-06%2C 27.6 38d in 192 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF016485;product=conserved hypothetical protein;protein_id=CAL13415.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3700142	3700459	.	+	.	ID=id5987;Note=Pfam match to entry PF01966 HD%2C HD domain%2C score 37.3%2C E-value 2.3e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF01966
AM286415.1	EMBL	gene	3700807	3701244	.	-	.	ID=gene3343;Name=YE3390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3390
AM286415.1	EMBL	CDS	3700807	3701244	.	-	0	ID=cds3246;Parent=gene3343;Dbxref=EnsemblGenomes-Gn:YE3390,EnsemblGenomes-Tr:CAL13416,InterPro:IPR024311,UniProtKB/TrEMBL:A1JPN2,NCBI_GP:CAL13416.1;Name=CAL13416.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13416.1;transl_table=11
AM286415.1	EMBL	gene	3701556	3704435	.	-	.	ID=gene3344;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=YE3391
AM286415.1	EMBL	CDS	3701556	3704435	.	-	0	ID=cds3247;Parent=gene3344;Dbxref=EnsemblGenomes-Gn:YE3391,EnsemblGenomes-Tr:CAL13417,GOA:A1JPN3,InterPro:IPR003437,InterPro:IPR015421,InterPro:IPR015424,InterPro:IPR020580,InterPro:IPR020581,NCBI_GP:CAL13417.1;Name=CAL13417.1;gbkey=CDS;gene=gcvP;product=glycine dehydrogenase;protein_id=CAL13417.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3702564	3702596	.	-	.	ID=id5988;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=gcvP;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3703116	3704390	.	-	.	ID=id5989;Note=Pfam match to entry PF02347 GDC-P%2C Glycine cleavage system P-protein%2C score 877.1%2C E-value 3.6e-261;gbkey=misc_feature;gene=gcvP;inference=protein motif:PFAM:PF02347
AM286415.1	EMBL	sequence_feature	3703569	3703601	.	-	.	ID=id5990;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=gcvP;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3704636	3705022	.	-	.	ID=gene3345;Name=gcsH;gbkey=Gene;gene=gcsH;gene_biotype=protein_coding;locus_tag=YE3392
AM286415.1	EMBL	CDS	3704636	3705022	.	-	0	ID=cds3248;Parent=gene3345;Dbxref=EnsemblGenomes-Gn:YE3392,EnsemblGenomes-Tr:CAL13418,GOA:A1JPN4,InterPro:IPR002930,InterPro:IPR003016,InterPro:IPR011053,InterPro:IPR017453,NCBI_GP:CAL13418.1;Name=CAL13418.1;gbkey=CDS;gene=gcsH;product=glycine cleavage system H protein;protein_id=CAL13418.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3704639	3705001	.	-	.	ID=id5991;Note=Pfam match to entry PF01597 GCV_H%2C Glycine cleavage H-protein%2C score 225.2%2C E-value 6.2e-65;gbkey=misc_feature;gene=gcsH;inference=protein motif:PFAM:PF01597
AM286415.1	EMBL	sequence_feature	3704789	3704878	.	-	.	ID=id5992;Note=PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.;gbkey=misc_feature;gene=gcsH;inference=protein motif:Prosite:PS00189
AM286415.1	EMBL	gene	3705089	3706186	.	-	.	ID=gene3346;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=YE3393
AM286415.1	EMBL	CDS	3705089	3706186	.	-	0	ID=cds3249;Parent=gene3346;Dbxref=EnsemblGenomes-Gn:YE3393,EnsemblGenomes-Tr:CAL13419,GOA:A1JPN6,InterPro:IPR006222,InterPro:IPR006223,InterPro:IPR013977,InterPro:IPR022903,InterPro:IPR027266,InterPro:IPR028896,InterPro:IPR029043,NCBI_GP:CAL13419.1;Name=CAL13419.1;gbkey=CDS;gene=gcvT;product=aminomethyltransferase;protein_id=CAL13419.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3705110	3706051	.	-	.	ID=id5993;Note=Pfam match to entry PF01571 GCV_T%2C Glycine cleavage T-protein (aminomethyl transferase)%2C score 512.9%2C E-value 1.5e-151;gbkey=misc_feature;gene=gcvT;inference=protein motif:PFAM:PF01571
AM286415.1	EMBL	gene	3706695	3707909	.	-	.	ID=gene3347;Name=visC;gbkey=Gene;gene=visC;gene_biotype=protein_coding;locus_tag=YE3394
AM286415.1	EMBL	CDS	3706695	3707909	.	-	0	ID=cds3250;Parent=gene3347;Dbxref=EnsemblGenomes-Gn:YE3394,EnsemblGenomes-Tr:CAL13420,GOA:A1JPN7,InterPro:IPR002938,InterPro:IPR003042,InterPro:IPR010971,InterPro:IPR018168,UniProtKB/TrEMBL:A1JPN7,NCBI_GP:CAL13420.1;Name=CAL13420.1;gbkey=CDS;gene=visC;product=putative monooxygenase;protein_id=CAL13420.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3706848	3707435	.	-	.	ID=id5994;Note=Pfam match to entry PF01360 Monooxygenase%2CMonooxygenase%2C score 142.1%2C E-value 6.5e-40;gbkey=misc_feature;gene=visC;inference=protein motif:PFAM:PF01360
AM286415.1	EMBL	sequence_feature	3706977	3707018	.	-	.	ID=id5995;Note=PS01304 ubiH/COQ6 monooxygenase family signature.;gbkey=misc_feature;gene=visC;inference=protein motif:Prosite:PS01304
AM286415.1	EMBL	sequence_feature	3707250	3707282	.	-	.	ID=id5996;Note=PS00133 Zinc carboxypeptidases%2C zinc-binding region 2 signature.;gbkey=misc_feature;gene=visC;inference=protein motif:Prosite:PS00133
AM286415.1	EMBL	sequence_feature	3707850	3707882	.	-	.	ID=id5997;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=visC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3707997	3709166	.	-	.	ID=gene3348;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;locus_tag=YE3395
AM286415.1	EMBL	CDS	3707997	3709166	.	-	0	ID=cds3251;Parent=gene3348;Dbxref=EnsemblGenomes-Gn:YE3395,EnsemblGenomes-Tr:CAL13421,GOA:A1JPN8,InterPro:IPR002938,InterPro:IPR003042,InterPro:IPR010971,InterPro:IPR011295,InterPro:IPR018168,UniProtKB/TrEMBL:A1JPN8,NCBI_GP:CAL13421.1;Name=CAL13421.1;gbkey=CDS;gene=ubiH;product=2-octaprenyl-6-methoxyphenol hydroxylase;protein_id=CAL13421.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3708132	3708707	.	-	.	ID=id5998;Note=Pfam match to entry PF01360 Monooxygenase%2CMonooxygenase%2C score 103.1%2C E-value 3.6e-28;gbkey=misc_feature;gene=ubiH;inference=protein motif:PFAM:PF01360
AM286415.1	EMBL	sequence_feature	3708252	3708293	.	-	.	ID=id5999;Note=PS01304 ubiH/COQ6 monooxygenase family signature.;gbkey=misc_feature;gene=ubiH;inference=protein motif:Prosite:PS01304
AM286415.1	EMBL	gene	3709170	3710483	.	-	.	ID=gene3349;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=YE3396
AM286415.1	EMBL	CDS	3709170	3710483	.	-	0	ID=cds3252;Parent=gene3349;Dbxref=EnsemblGenomes-Gn:YE3396,EnsemblGenomes-Tr:CAL13422,GOA:A1JPN9,InterPro:IPR000994,InterPro:IPR001131,InterPro:IPR001714,InterPro:IPR007865,InterPro:IPR028980,InterPro:IPR029149,UniProtKB/TrEMBL:A1JPN9,NCBI_GP:CAL13422.1;Name=CAL13422.1;gbkey=CDS;gene=pepP;product=proline-specific aminopeptidase;protein_id=CAL13422.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3709206	3709970	.	-	.	ID=id6000;Note=Pfam match to entry PF00557 Peptidase_M24%2Cmetallopeptidase family M24%2C score 374.4%2C E-value 7.5e-110;gbkey=misc_feature;gene=pepP;inference=protein motif:PFAM:PF00557
AM286415.1	EMBL	sequence_feature	3709404	3709442	.	-	.	ID=id6001;Note=PS00491 Aminopeptidase P and proline dipeptidase signature.;gbkey=misc_feature;gene=pepP;inference=protein motif:Prosite:PS00491
AM286415.1	EMBL	gene	3710538	3711116	.	-	.	ID=gene3350;Name=YE3397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3397
AM286415.1	EMBL	CDS	3710538	3711116	.	-	0	ID=cds3253;Parent=gene3350;Dbxref=EnsemblGenomes-Gn:YE3397,EnsemblGenomes-Tr:CAL13423,InterPro:IPR011978,NCBI_GP:CAL13423.1;Name=CAL13423.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13423.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3710541	3711098	.	-	.	ID=id6002;Note=Pfam match to entry PF03695 UPF0149%2CUncharacterised protein family (UPF0149)%2C score 302.1%2CE-value 4.4e-88;gbkey=misc_feature;inference=protein motif:PFAM:PF03695
AM286415.1	EMBL	gene	3711500	3711829	.	+	.	ID=gene3351;Name=YE3398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3398
AM286415.1	EMBL	CDS	3711500	3711829	.	+	0	ID=cds3254;Parent=gene3351;Dbxref=EnsemblGenomes-Gn:YE3398,EnsemblGenomes-Tr:CAL13424,GOA:A1JPP1,InterPro:IPR007838,InterPro:IPR023771,NCBI_GP:CAL13424.1;Name=CAL13424.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13424.1;transl_table=11
AM286415.1	EMBL	gene	3711866	3712059	.	+	.	ID=gene3352;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=misc_RNA
AM286415.1	EMBL	transcript	3711867	3712049	.	+	.	ID=rna128;Parent=gene3352;Note=6S / SsrS RNA (RF00013) as predicted by Rfam%2C score 88.17%2C positions 1 to 184;gbkey=misc_RNA;gene=ssrS
AM286415.1	EMBL	exon	3711867	3712049	.	+	.	ID=id6003;Parent=rna128;Note=6S / SsrS RNA (RF00013) as predicted by Rfam%2C score 88.17%2C positions 1 to 184;gbkey=misc_RNA;gene=ssrS
AM286415.1	EMBL	sequence_feature	3711866	3712059	.	+	.	ID=id6004;Note=Similar to Escherichia coli 6S RNA%2C ssrS%2C 86 identity in 194 nt overlap;gbkey=misc_feature;gene=ssrS
AM286415.1	EMBL	gene	3712268	3712864	.	+	.	ID=gene3353;Name=YE3399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3399
AM286415.1	EMBL	CDS	3712268	3712864	.	+	0	ID=cds3255;Parent=gene3353;Dbxref=EnsemblGenomes-Gn:YE3399,EnsemblGenomes-Tr:CAL13425,GOA:A1JPP2,InterPro:IPR002698,InterPro:IPR024185,UniProtKB/TrEMBL:A1JPP2,NCBI_GP:CAL13425.1;Name=CAL13425.1;gbkey=CDS;product=putative 5-formyltetrahydrofolate cyclo-ligase-family protein;protein_id=CAL13425.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3712292	3712843	.	+	.	ID=id6005;Note=Pfam match to entry PF01812 5-FTHF_cyc-lig%2C5-formyltetrahydrofolate cyclo-ligase family%2C score 209.6%2C E-value 3.2e-60;gbkey=misc_feature;inference=protein motif:PFAM:PF01812
AM286415.1	EMBL	gene	3712960	3714201	.	-	.	ID=gene3354;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=YE3400
AM286415.1	EMBL	CDS	3712960	3714201	.	-	0	ID=cds3256;Parent=gene3354;Dbxref=EnsemblGenomes-Gn:YE3400,EnsemblGenomes-Tr:CAL13426,GOA:A1JPP3,InterPro:IPR002912,InterPro:IPR006139,InterPro:IPR006140,InterPro:IPR016040,InterPro:IPR029015,InterPro:IPR029752,InterPro:IPR029753,UniProtKB/TrEMBL:A1JPP3,NCBI_GP:CAL13426.1;Name=CAL13426.1;gbkey=CDS;gene=serA;product=D-3-phosphoglycerate dehydrogenase;protein_id=CAL13426.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3712966	3713184	.	-	.	ID=id6006;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 55.3%2C E-value 8.6e-14;gbkey=misc_feature;gene=serA;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	sequence_feature	3713326	3713880	.	-	.	ID=id6007;Note=Pfam match to entry PF02826 2-Hacid_DH_C%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain %2Cscore 317.6%2C E-value 9.5e-93;gbkey=misc_feature;gene=serA;inference=protein motif:PFAM:PF02826
AM286415.1	EMBL	sequence_feature	3713467	3713517	.	-	.	ID=id6008;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;gbkey=misc_feature;gene=serA;inference=protein motif:Prosite:PS00671
AM286415.1	EMBL	sequence_feature	3713536	3713604	.	-	.	ID=id6009;Note=PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2.;gbkey=misc_feature;gene=serA;inference=protein motif:Prosite:PS00670
AM286415.1	EMBL	sequence_feature	3713659	3713742	.	-	.	ID=id6010;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;gbkey=misc_feature;gene=serA;inference=protein motif:Prosite:PS00065
AM286415.1	EMBL	sequence_feature	3713884	3714171	.	-	.	ID=id6011;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain %2Cscore 122.1%2C E-value 6.8e-34;gbkey=misc_feature;gene=serA;inference=protein motif:PFAM:PF00389
AM286415.1	EMBL	gene	3714515	3715177	.	-	.	ID=gene3355;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=YE3401
AM286415.1	EMBL	CDS	3714515	3715177	.	-	0	ID=cds3257;Parent=gene3355;Dbxref=EnsemblGenomes-Gn:YE3401,EnsemblGenomes-Tr:CAL13427,GOA:A1JPP4,InterPro:IPR004788,InterPro:IPR020672,NCBI_GP:CAL13427.1;Name=CAL13427.1;gbkey=CDS;gene=rpiA;product=ribose 5-phosphate isomerase A;protein_id=CAL13427.1;transl_table=11
AM286415.1	EMBL	gene	3715398	3716291	.	+	.	ID=gene3356;Name=iciA;gbkey=Gene;gene=iciA;gene_biotype=protein_coding;locus_tag=YE3402
AM286415.1	EMBL	CDS	3715398	3716291	.	+	0	ID=cds3258;Parent=gene3356;Dbxref=EnsemblGenomes-Gn:YE3402,EnsemblGenomes-Tr:CAL13428,GOA:A1JPP6,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,InterPro:IPR017685,InterPro:IPR023490,NCBI_GP:CAL13428.1;Name=CAL13428.1;gbkey=CDS;gene=iciA;product=chromosome initiation inhibitor;protein_id=CAL13428.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3715413	3715589	.	+	.	ID=id6012;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 90.3%2C E-value 2.6e-24;gbkey=misc_feature;gene=iciA;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	3715455	3715547	.	+	.	ID=id6013;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=iciA;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	3715653	3716270	.	+	.	ID=id6014;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 33.1%2C E-value 4.1e-07;gbkey=misc_feature;gene=iciA;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	3716293	3717048	.	-	.	ID=gene3357;Name=yggE;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=YE3403
AM286415.1	EMBL	CDS	3716293	3717048	.	-	0	ID=cds3259;Parent=gene3357;Dbxref=EnsemblGenomes-Gn:YE3403,EnsemblGenomes-Tr:CAL13429,InterPro:IPR007497,UniProtKB/TrEMBL:A1JPP7,NCBI_GP:CAL13429.1;Name=CAL13429.1;gbkey=CDS;gene=yggE;product=putative exported protein;protein_id=CAL13429.1;transl_table=11
AM286415.1	EMBL	gene	3717259	3717876	.	-	.	ID=gene3358;Name=yggA;gbkey=Gene;gene=yggA;gene_biotype=protein_coding;locus_tag=YE3405
AM286415.1	EMBL	CDS	3717259	3717876	.	-	0	ID=cds3260;Parent=gene3358;Dbxref=EnsemblGenomes-Gn:YE3405,EnsemblGenomes-Tr:CAL13430,GOA:A1JPP8,InterPro:IPR001123,InterPro:IPR004777,InterPro:IPR023445,NCBI_GP:CAL13430.1;Name=CAL13430.1;gbkey=CDS;gene=yggA;product=putative LysE type translocator;protein_id=CAL13430.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3717799	3717867	.	-	.	ID=id6015;Note=6 probable transmembrane helices predicted for YE3405 by TMHMM2.0 at aa 4-26%2C 38-60%2C 70-92%2C 111-133%2C148-170 and 182-199;gbkey=misc_feature;gene=yggA;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3717697	3717765	.	-	.	ID=id6015;Note=6 probable transmembrane helices predicted for YE3405 by TMHMM2.0 at aa 4-26%2C 38-60%2C 70-92%2C 111-133%2C148-170 and 182-199;gbkey=misc_feature;gene=yggA;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3717601	3717669	.	-	.	ID=id6015;Note=6 probable transmembrane helices predicted for YE3405 by TMHMM2.0 at aa 4-26%2C 38-60%2C 70-92%2C 111-133%2C148-170 and 182-199;gbkey=misc_feature;gene=yggA;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3717478	3717546	.	-	.	ID=id6015;Note=6 probable transmembrane helices predicted for YE3405 by TMHMM2.0 at aa 4-26%2C 38-60%2C 70-92%2C 111-133%2C148-170 and 182-199;gbkey=misc_feature;gene=yggA;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3717367	3717435	.	-	.	ID=id6015;Note=6 probable transmembrane helices predicted for YE3405 by TMHMM2.0 at aa 4-26%2C 38-60%2C 70-92%2C 111-133%2C148-170 and 182-199;gbkey=misc_feature;gene=yggA;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3717280	3717333	.	-	.	ID=id6015;Note=6 probable transmembrane helices predicted for YE3405 by TMHMM2.0 at aa 4-26%2C 38-60%2C 70-92%2C 111-133%2C148-170 and 182-199;gbkey=misc_feature;gene=yggA;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	3717355	3717681	.	-	.	ID=id6016;Note=Pfam match to entry PF01810 LysE%2C LysE type translocator%2C score 102.2%2C E-value 6.5e-28;gbkey=misc_feature;gene=yggA;inference=protein motif:PFAM:PF01810
AM286415.1	EMBL	gene	3718184	3719053	.	-	.	ID=gene3359;Name=YE3406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3406
AM286415.1	EMBL	CDS	3718184	3719053	.	-	0	ID=cds3261;Parent=gene3359;Dbxref=EnsemblGenomes-Gn:YE3406,EnsemblGenomes-Tr:CAL13431,GOA:A1JPQ0,InterPro:IPR006685,InterPro:IPR006686,InterPro:IPR008910,InterPro:IPR010920,InterPro:IPR011014,InterPro:IPR011066,UniProtKB/TrEMBL:A1JPQ0,NCBI_GP:CAL13431.1;Name=CAL13431.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13431.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3718247	3718846	.	-	.	ID=id6017;Note=Pfam match to entry PF00924 MS_channel%2CMechanosensitive ion channel%2C score 266.6%2C E-value 2.1e-77;gbkey=misc_feature;inference=protein motif:PFAM:PF00924
AM286415.1	EMBL	sequence_feature	3718523	3718627	.	-	.	ID=id6018;Note=PS01246 Uncharacterized protein family UPF0003 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01246
AM286415.1	EMBL	sequence_feature	3718919	3718987	.	-	.	ID=id6019;Note=3 probable transmembrane helices predicted for YE3406 by TMHMM2.0 at aa 23-45%2C 65-87 and 94-116;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3718793	3718861	.	-	.	ID=id6019;Note=3 probable transmembrane helices predicted for YE3406 by TMHMM2.0 at aa 23-45%2C 65-87 and 94-116;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3718706	3718774	.	-	.	ID=id6019;Note=3 probable transmembrane helices predicted for YE3406 by TMHMM2.0 at aa 23-45%2C 65-87 and 94-116;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	repeat_region	3719287	3720871	.	-	.	ID=id6020;Note=Insertion sequence element IS1668;gbkey=repeat_region
AM286415.1	EMBL	gene	3719323	3720792	.	-	.	ID=gene3360;Name=YE3407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3407
AM286415.1	EMBL	CDS	3719323	3720792	.	-	0	ID=cds3262;Parent=gene3360;Dbxref=EnsemblGenomes-Gn:YE3407,EnsemblGenomes-Tr:CAL13432,InterPro:IPR008490,UniProtKB/TrEMBL:A1JPQ2,NCBI_GP:CAL13432.1;Name=CAL13432.1;Note=Similar to many including: Thermoanaerobacter tengcongensis transposase Tte0515 SWALL:Q8RCC1 (EMBL:AE013022) (499 aa) fasta scores: E(): 1.5e-76%2C46.62 38d in 444 aa and to Streptococcus pyogenes transposase SWALL:Q9FB00 (EMBL:AB030747) (428 aa) fasta scores: E(): 2.1e-58%2C 39.53 38d in 430 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE013022;product=transposase for IS1668;protein_id=CAL13432.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3719479	3720132	.	-	.	ID=id6021;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score -6.4%2C E-value 0.015;gbkey=misc_feature;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	gene	3721000	3722502	.	-	.	ID=gene3361;Name=YE3408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3408
AM286415.1	EMBL	CDS	3721000	3722502	.	-	0	ID=cds3263;Parent=gene3361;Dbxref=EnsemblGenomes-Gn:YE3408,EnsemblGenomes-Tr:CAL13433,UniProtKB/TrEMBL:A1JPQ3,NCBI_GP:CAL13433.1;Name=CAL13433.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL13433.1;transl_table=11
AM286415.1	EMBL	gene	3723246	3723641	.	-	.	ID=gene3362;Name=traM;gbkey=Gene;gene=traM;gene_biotype=protein_coding;locus_tag=YE3409
AM286415.1	EMBL	CDS	3723246	3723641	.	-	0	ID=cds3264;Parent=gene3362;Dbxref=EnsemblGenomes-Gn:YE3409,EnsemblGenomes-Tr:CAL13434,GOA:A1JPQ4,InterPro:IPR007925,InterPro:IPR010992,UniProtKB/TrEMBL:A1JPQ4,NCBI_GP:CAL13434.1;Name=CAL13434.1;Note=Similar to many plasmid transfer-related proteins: Escherichia coli TraM protein SWALL:TRM8_ECOLI (SWALL:P33788) (127 aa) fasta scores: E(): 3e-14%2C 42.18 id in 128 aa and Salmonella typhimurium%2C and Salmonella enterica subsp. enterica serovar Enteritidis conjugative transfer: mating signal tram or pslt073 SWALL:Q93GP1 (EMBL:AE006471) (126 aa) fasta scores: E(): 6.6e-10%2C38.21 38d in 123 aa;gbkey=CDS;gene=traM;inference=similar to sequence:UniProtKB:P33788;product=plasmid transfer protein;protein_id=CAL13434.1;transl_table=11
AM286415.1	EMBL	gene	3724129	3724566	.	+	.	ID=gene3363;Name=YE3411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3411
AM286415.1	EMBL	CDS	3724129	3724566	.	+	0	ID=cds3265;Parent=gene3363;Dbxref=EnsemblGenomes-Gn:YE3411,EnsemblGenomes-Tr:CAL13435,InterPro:IPR008258,InterPro:IPR023346,UniProtKB/TrEMBL:A1JPQ5,NCBI_GP:CAL13435.1;Name=CAL13435.1;Note=Similar to many plasmid related proteins including: Escherichia coli plasmid x polypeptide YubQ or YgfA or x or 19 SWALL:X19F_ECOLI (SWALL:P47737) (169 aa) fasta scores: E(): 1.7e-32%2C 62.12 38d in 132 aa%2C Plasmid R100 protein X SWALL:BAA78847 (EMBL:AP000342) (169 aa) fasta scores: E(): 2e-32%2C 62.59 38d in 131 aa. Also similar to Escherichia coli PilT SWALL:Q93D61 (EMBL:AF399919) (175 aa) fasta scores: E(): 3.1e-18%2C 48.48 38d in 132 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P47737;product=hypothetical protein;protein_id=CAL13435.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3724165	3724524	.	+	.	ID=id6022;Note=Pfam match to entry PF01464 SLT%2C Transglycosylase SLT domain%2C score 128.5%2C E-value 8.1e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF01464
AM286415.1	EMBL	repeat_region	3724582	3726166	.	-	.	ID=id6023;Note=Insertion sequence element IS1668;gbkey=repeat_region
AM286415.1	EMBL	gene	3724618	3726087	.	-	.	ID=gene3364;Name=YE3412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3412
AM286415.1	EMBL	CDS	3724618	3726087	.	-	0	ID=cds3266;Parent=gene3364;Dbxref=EnsemblGenomes-Gn:YE3412,EnsemblGenomes-Tr:CAL13436,InterPro:IPR008490,UniProtKB/TrEMBL:A1JPQ7,NCBI_GP:CAL13436.1;Name=CAL13436.1;Note=Similar to many including: Thermoanaerobacter tengcongensis transposase Tte0515 SWALL:Q8RCC1 (EMBL:AE013022) (499 aa) fasta scores: E(): 3.7e-77%2C46.62 38d in 444 aa and to Streptococcus pyogenes transposase SWALL:Q9FB00 (EMBL:AB030747) (428 aa) fasta scores: E(): 4.8e-59%2C 39.76 38d in 430 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE013022;product=transposase for IS1668;protein_id=CAL13436.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3724774	3725427	.	-	.	ID=id6024;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score -6.4%2C E-value 0.015;gbkey=misc_feature;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	gene	3726210	3727289	.	-	.	ID=gene3365;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;gene_synonym=fba,fda;locus_tag=YE3413
AM286415.1	EMBL	CDS	3726210	3727289	.	-	0	ID=cds3267;Parent=gene3365;Dbxref=EnsemblGenomes-Gn:YE3413,EnsemblGenomes-Tr:CAL13437,GOA:A1JPQ8,InterPro:IPR000771,InterPro:IPR006411,InterPro:IPR013785,UniProtKB/TrEMBL:A1JPQ8,NCBI_GP:CAL13437.1;Name=CAL13437.1;gbkey=CDS;gene=fbaA;product=fructose-bisphosphate aldolase class II;protein_id=CAL13437.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3726213	3727250	.	-	.	ID=id6025;Note=Pfam match to entry PF01116 F_bP_aldolase%2CFructose-bisphosphate aldolase class-II%2C score 701.9%2CE-value 1.9e-208;gbkey=misc_feature;gene=fbaA;inference=protein motif:PFAM:PF01116
AM286415.1	EMBL	sequence_feature	3726741	3726776	.	-	.	ID=id6026;Note=PS00806 Fructose-bisphosphate aldolase class-II signature 2.;gbkey=misc_feature;gene=fbaA;inference=protein motif:Prosite:PS00806
AM286415.1	EMBL	sequence_feature	3726954	3726989	.	-	.	ID=id6027;Note=PS00602 Fructose-bisphosphate aldolase class-II signature 1.;gbkey=misc_feature;gene=fbaA;inference=protein motif:Prosite:PS00602
AM286415.1	EMBL	gene	3727548	3728711	.	-	.	ID=gene3366;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=YE3414
AM286415.1	EMBL	CDS	3727548	3728711	.	-	0	ID=cds3268;Parent=gene3366;Dbxref=EnsemblGenomes-Gn:YE3414,EnsemblGenomes-Tr:CAL13438,GOA:A1JPR0,InterPro:IPR001576,InterPro:IPR015824,InterPro:IPR015901,InterPro:IPR015911,NCBI_GP:CAL13438.1;Name=CAL13438.1;gbkey=CDS;gene=pgk;product=phosphoglycerate kinase;protein_id=CAL13438.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3727557	3728711	.	-	.	ID=id6028;Note=Pfam match to entry PF00162 PGK%2C Phosphoglycerate kinase%2C score 718.0%2C E-value 2.8e-213;gbkey=misc_feature;gene=pgk;inference=protein motif:PFAM:PF00162
AM286415.1	EMBL	sequence_feature	3728637	3728669	.	-	.	ID=id6029;Note=PS00111 Phosphoglycerate kinase signature.;gbkey=misc_feature;gene=pgk;inference=protein motif:Prosite:PS00111
AM286415.1	EMBL	gene	3728815	3729831	.	-	.	ID=gene3367;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;gene_synonym=gapB;locus_tag=YE3415
AM286415.1	EMBL	CDS	3728815	3729831	.	-	0	ID=cds3269;Parent=gene3367;Dbxref=EnsemblGenomes-Gn:YE3415,EnsemblGenomes-Tr:CAL13439,GOA:A1JPR1,InterPro:IPR006422,InterPro:IPR016040,InterPro:IPR020828,InterPro:IPR020829,InterPro:IPR020830,InterPro:IPR020831,NCBI_GP:CAL13439.1;Name=CAL13439.1;gbkey=CDS;gene=epd;product=D-erythrose 4-phosphate dehydrogenase;protein_id=CAL13439.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3728884	3729366	.	-	.	ID=id6030;Note=Pfam match to entry PF02800 gpdh_C%2C Glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%2C score 246.0%2C E-value 3.4e-71;gbkey=misc_feature;gene=epd;inference=protein motif:PFAM:PF02800
AM286415.1	EMBL	sequence_feature	3729352	3729375	.	-	.	ID=id6031;Note=PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.;gbkey=misc_feature;gene=epd;inference=protein motif:Prosite:PS00071
AM286415.1	EMBL	sequence_feature	3729367	3729828	.	-	.	ID=id6032;Note=Pfam match to entry PF00044 gpdh%2C Glyceraldehyde 3-phosphate dehydrogenase%2C NAD binding domain%2C score 258.1%2C E-value 7.5e-75;gbkey=misc_feature;gene=epd;inference=protein motif:PFAM:PF00044
AM286415.1	EMBL	sequence_feature	3729601	3729645	.	-	.	ID=id6033;Note=PS00090 Nitrogenases component 1 alpha and beta subunits signature 2.;gbkey=misc_feature;gene=epd;inference=protein motif:Prosite:PS00090
AM286415.1	EMBL	gene	3730171	3732165	.	-	.	ID=gene3368;Name=tktA;gbkey=Gene;gene=tktA;gene_biotype=protein_coding;gene_synonym=tkt;locus_tag=YE3416
AM286415.1	EMBL	CDS	3730171	3732165	.	-	0	ID=cds3270;Parent=gene3368;Dbxref=EnsemblGenomes-Gn:YE3416,EnsemblGenomes-Tr:CAL13440,GOA:A1JPR2,InterPro:IPR005474,InterPro:IPR005475,InterPro:IPR005476,InterPro:IPR005478,InterPro:IPR009014,InterPro:IPR020826,InterPro:IPR029061,UniProtKB/TrEMBL:A1JPR2,NCBI_GP:CAL13440.1;Name=CAL13440.1;gbkey=CDS;gene=tktA;product=transketolase 1;protein_id=CAL13440.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3730201	3730548	.	-	.	ID=id6034;Note=Pfam match to entry PF02780 transketolase_C%2CTransketolase%2C C-terminal domain%2C score 64.4%2C E-value 1.6e-16;gbkey=misc_feature;gene=tktA;inference=protein motif:PFAM:PF02780
AM286415.1	EMBL	sequence_feature	3730591	3731106	.	-	.	ID=id6035;Note=Pfam match to entry PF02779 transket_pyr%2CTransketolase%2C pyridine binding domain%2C score 231.9%2CE-value 6.1e-67;gbkey=misc_feature;gene=tktA;inference=protein motif:PFAM:PF02779
AM286415.1	EMBL	sequence_feature	3730717	3730767	.	-	.	ID=id6036;Note=PS00802 Transketolase signature 2.;gbkey=misc_feature;gene=tktA;inference=protein motif:Prosite:PS00802
AM286415.1	EMBL	sequence_feature	3730852	3730920	.	-	.	ID=id6037;Note=1 probable transmembrane helix predicted for YE3416 by TMHMM2.0 at aa 416-438;gbkey=misc_feature;gene=tktA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3731164	3732159	.	-	.	ID=id6038;Note=Pfam match to entry PF00456 transketolase%2CTransketolase%2C thiamine diphosphate binding domain%2C score 835.2%2C E-value 1.4e-248;gbkey=misc_feature;gene=tktA;inference=protein motif:PFAM:PF00456
AM286415.1	EMBL	sequence_feature	3732070	3732132	.	-	.	ID=id6039;Note=PS00801 Transketolase signature 1.;gbkey=misc_feature;gene=tktA;inference=protein motif:Prosite:PS00801
AM286415.1	EMBL	gene	3732460	3733212	.	+	.	ID=gene3369;Name=YE3417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3417
AM286415.1	EMBL	CDS	3732460	3733212	.	+	0	ID=cds3271;Parent=gene3369;Dbxref=EnsemblGenomes-Gn:YE3417,EnsemblGenomes-Tr:CAL13441,GOA:A1JPS0,InterPro:IPR001915,UniProtKB/TrEMBL:A1JPS0,NCBI_GP:CAL13441.1;Name=CAL13441.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL13441.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3732484	3732516	.	+	.	ID=id6040;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3732682	3733185	.	+	.	ID=id6041;Note=Pfam match to entry PF01435 Peptidase_M48%2CPeptidase family M48%2C score -32.8%2C E-value 3.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01435
AM286415.1	EMBL	gene	3733285	3733605	.	-	.	ID=gene3370;Name=YE3418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3418
AM286415.1	EMBL	CDS	3733285	3733605	.	-	0	ID=cds3272;Parent=gene3370;Dbxref=EnsemblGenomes-Gn:YE3418,EnsemblGenomes-Tr:CAL13442,GOA:A1JPS2,InterPro:IPR017941,UniProtKB/TrEMBL:A1JPS2,NCBI_GP:CAL13442.1;Name=CAL13442.1;gbkey=CDS;product=putative Rieske protein;protein_id=CAL13442.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3733321	3733602	.	-	.	ID=id6042;Note=Pfam match to entry PF00355 Rieske%2C Rieske [2Fe-2S] domain%2C score 87.6%2C E-value 1.7e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00355
AM286415.1	EMBL	gene	3733933	3735912	.	-	.	ID=gene3371;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=YE3419
AM286415.1	EMBL	CDS	3733933	3735912	.	-	0	ID=cds3273;Parent=gene3371;Dbxref=EnsemblGenomes-Gn:YE3419,EnsemblGenomes-Tr:CAL13443,GOA:A1JPS3,InterPro:IPR000183,InterPro:IPR002985,InterPro:IPR009006,InterPro:IPR022643,InterPro:IPR022644,InterPro:IPR022653,InterPro:IPR022657,InterPro:IPR029066,UniProtKB/TrEMBL:A1JPS3,NCBI_GP:CAL13443.1;Name=CAL13443.1;gbkey=CDS;gene=speA;product=biosynthetic arginine decarboxylase;protein_id=CAL13443.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3734146	3734799	.	-	.	ID=id6043;Note=Pfam match to entry PF00278 Orn_DAP_Arg_deC%2CPyridoxal-dependent decarboxylase%2C C-terminal sheet domain%2C score 163.4%2C E-value 2.5e-46;gbkey=misc_feature;gene=speA;inference=protein motif:PFAM:PF00278
AM286415.1	EMBL	sequence_feature	3734806	3735630	.	-	.	ID=id6044;Note=Pfam match to entry PF02784 Orn_Arg_deC_N%2CPyridoxal-dependent decarboxylase%2C pyridoxal binding domain%2C score 372.4%2C E-value 3e-109;gbkey=misc_feature;gene=speA;inference=protein motif:PFAM:PF02784
AM286415.1	EMBL	sequence_feature	3734968	3735009	.	-	.	ID=id6045;Note=PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2.;gbkey=misc_feature;gene=speA;inference=protein motif:Prosite:PS00879
AM286415.1	EMBL	sequence_feature	3735484	3735540	.	-	.	ID=id6046;Note=PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site.;gbkey=misc_feature;gene=speA;inference=protein motif:Prosite:PS00878
AM286415.1	EMBL	gene	3736915	3738069	.	+	.	ID=gene3372;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=YE3421
AM286415.1	EMBL	CDS	3736915	3738069	.	+	0	ID=cds3274;Parent=gene3372;Dbxref=EnsemblGenomes-Gn:YE3421,EnsemblGenomes-Tr:CAL13444,GOA:A1JPS4,InterPro:IPR002133,InterPro:IPR022628,InterPro:IPR022629,InterPro:IPR022630,InterPro:IPR022631,InterPro:IPR022636,NCBI_GP:CAL13444.1;Name=CAL13444.1;gbkey=CDS;gene=metK;product=S-adenosylmethionine synthetase;protein_id=CAL13444.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3736918	3737220	.	+	.	ID=id6047;Note=Pfam match to entry PF00438 S-AdoMet_synt%2CS-adenosylmethionine synthetase%2C N-terminal domain%2C score 215.4%2C E-value 5.4e-62;gbkey=misc_feature;gene=metK;inference=protein motif:PFAM:PF00438
AM286415.1	EMBL	sequence_feature	3737251	3737607	.	+	.	ID=id6048;Note=Pfam match to entry PF02772 S-AdoMet_syntD2%2CS-adenosylmethionine synthetase%2C central domain%2C score 290.2%2C E-value 1.7e-84;gbkey=misc_feature;gene=metK;inference=protein motif:PFAM:PF02772
AM286415.1	EMBL	sequence_feature	3737260	3737292	.	+	.	ID=id6049;Note=PS00376 S-adenosylmethionine synthetase signature 1.;gbkey=misc_feature;gene=metK;inference=protein motif:Prosite:PS00376
AM286415.1	EMBL	sequence_feature	3737611	3738060	.	+	.	ID=id6050;Note=Pfam match to entry PF02773 S-AdoMet_syntD3%2CS-adenosylmethionine synthetase%2C C-terminal domain%2C score 317.9%2C E-value 7.8e-93;gbkey=misc_feature;gene=metK;inference=protein motif:PFAM:PF02773
AM286415.1	EMBL	sequence_feature	3737689	3737715	.	+	.	ID=id6051;Note=PS00377 S-adenosylmethionine synthetase signature 2.;gbkey=misc_feature;gene=metK;inference=protein motif:Prosite:PS00377
AM286415.1	EMBL	gene	3738135	3738554	.	-	.	ID=gene3373;Name=YE3422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3422
AM286415.1	EMBL	CDS	3738135	3738554	.	-	0	ID=cds3275;Parent=gene3373;Dbxref=EnsemblGenomes-Gn:YE3422,EnsemblGenomes-Tr:CAL13445,InterPro:IPR007272,UniProtKB/TrEMBL:A1JPS6,NCBI_GP:CAL13445.1;Name=CAL13445.1;Note=Similar to Ralstonia solanacearum probable transmembrane protein Rsc0437 or Rs03406 SWALL:Q8Y299 (EMBL:AL646059) (137 aa) fasta scores: E(): 1.6e-26%2C58.39 38d in 137 aa%2C and to uncultured proteobacterium conserved hypothetical protein ebac000-60d04.57 SWALL:AAM48689 (EMBL:AE008921) (141 aa) fasta scores: E(): 6.1e-21%2C 47.48 38d in 139 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646059;product=probable membrane protein;protein_id=CAL13445.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3738489	3738548	.	-	.	ID=id6052;Note=4 probable transmembrane helices predicted for YE3422 by TMHMM2.0 at aa 21-40%2C 55-77%2C 102-124 and 134-151;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3738378	3738446	.	-	.	ID=id6052;Note=4 probable transmembrane helices predicted for YE3422 by TMHMM2.0 at aa 21-40%2C 55-77%2C 102-124 and 134-151;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3738237	3738305	.	-	.	ID=id6052;Note=4 probable transmembrane helices predicted for YE3422 by TMHMM2.0 at aa 21-40%2C 55-77%2C 102-124 and 134-151;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3738156	3738209	.	-	.	ID=id6052;Note=4 probable transmembrane helices predicted for YE3422 by TMHMM2.0 at aa 21-40%2C 55-77%2C 102-124 and 134-151;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	3738571	3739002	.	-	.	ID=gene3374;Name=YE3422A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3422A
AM286415.1	EMBL	CDS	3738571	3739002	.	-	0	ID=cds3276;Parent=gene3374;Dbxref=EnsemblGenomes-Gn:YE3422A,EnsemblGenomes-Tr:CAL13446,InterPro:IPR007272,InterPro:IPR025598,UniProtKB/TrEMBL:A1JPS7,NCBI_GP:CAL13446.1;Name=CAL13446.1;Note=Similar to many proteins of undefined function including: Pseudomonas putida YeeE/YedE family protein pp3295 SWALL:AAN68902 (EMBL:AE016786) (159 aa) fasta scores: E(): 1.2e-26%2C 53.14 38d in 143 aa and to Ralstonia solanacearum probable transmembrane protein rsc0438 or rs03407 SWALL:Q8Y298 (EMBL:AL646059) (144 aa) fasta scores: E(): 6.3e-23%2C 53.52 38d in 142 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646059;product=probable membrane protein;protein_id=CAL13446.1;transl_table=11
AM286415.1	EMBL	gene	3738999	3739304	.	-	.	ID=gene3375;Name=YE3423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3423
AM286415.1	EMBL	CDS	3738999	3739304	.	-	0	ID=cds3277;Parent=gene3375;Dbxref=EnsemblGenomes-Gn:YE3423,EnsemblGenomes-Tr:CAL13447,GOA:A1JPS8,InterPro:IPR001845,InterPro:IPR011991,UniProtKB/TrEMBL:A1JPS8,NCBI_GP:CAL13447.1;Name=CAL13447.1;Note=Similar to Vibrio cholerae transcriptional activator HlyU or vc0678 SWALL:HLYU_VIBCH (SWALL:P52695) (108 aa) fasta scores: E(): 6.1e-12%2C 47.25 38d in 91 aa%2Cand to Ralstonia solanacearum probable transcription regulator protein rsc1543 or rs05230 SWALL:Q8XZ61 (EMBL:AL646065) (121 aa) fasta scores: E(): 4.1e-20%2C59.37 38d in 96 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P52695;product=ArsR-family transcriptional regulator;protein_id=CAL13447.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3739029	3739262	.	-	.	ID=id6053;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 92.4%2C E-value 5.9e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF01022
AM286415.1	EMBL	gene	3739455	3739967	.	+	.	ID=gene3376;Name=YE3424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3424
AM286415.1	EMBL	CDS	3739455	3739967	.	+	0	ID=cds3278;Parent=gene3376;Dbxref=EnsemblGenomes-Gn:YE3424,EnsemblGenomes-Tr:CAL13448,GOA:A1JPT0,InterPro:IPR006640,InterPro:IPR023483,NCBI_GP:CAL13448.1;Name=CAL13448.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13448.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3739500	3739949	.	+	.	ID=id6054;Note=Pfam match to entry PF03926 DUF335%2C Putative metallopeptidase (SprT family)%2C score 249.2%2C E-value 3.7e-72;gbkey=misc_feature;inference=protein motif:PFAM:PF03926
AM286415.1	EMBL	sequence_feature	3739677	3739706	.	+	.	ID=id6055;Note=PS00142 Neutral zinc metallopeptidases%2Czinc-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00142
AM286415.1	EMBL	gene	3740064	3740771	.	+	.	ID=gene3377;Name=endA;gbkey=Gene;gene=endA;gene_biotype=protein_coding;gene_synonym=nucM;locus_tag=YE3425
AM286415.1	EMBL	CDS	3740064	3740771	.	+	0	ID=cds3279;Parent=gene3377;Dbxref=EnsemblGenomes-Gn:YE3425,EnsemblGenomes-Tr:CAL13449,GOA:A1JPT1,InterPro:IPR007346,UniProtKB/TrEMBL:A1JPT1,NCBI_GP:CAL13449.1;Name=CAL13449.1;gbkey=CDS;gene=endA;product=endonuclease I;protein_id=CAL13449.1;transl_table=11
AM286415.1	EMBL	gene	3740817	3741548	.	+	.	ID=gene3378;Name=YE3426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3426
AM286415.1	EMBL	CDS	3740817	3741548	.	+	0	ID=cds3280;Parent=gene3378;Dbxref=EnsemblGenomes-Gn:YE3426,EnsemblGenomes-Tr:CAL13450,GOA:A1JPT3,InterPro:IPR006700,InterPro:IPR015947,InterPro:IPR029026,InterPro:IPR029028,UniProtKB/TrEMBL:A1JPT3,NCBI_GP:CAL13450.1;Name=CAL13450.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13450.1;transl_table=11
AM286415.1	EMBL	gene	3741574	3742527	.	+	.	ID=gene3379;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;gene_synonym=gsh-II;locus_tag=YE3427
AM286415.1	EMBL	CDS	3741574	3742527	.	+	0	ID=cds3281;Parent=gene3379;Dbxref=EnsemblGenomes-Gn:YE3427,EnsemblGenomes-Tr:CAL13451,GOA:A1JPT4,InterPro:IPR004215,InterPro:IPR004218,InterPro:IPR006284,InterPro:IPR011761,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR016185,UniProtKB/TrEMBL:A1JPT4,NCBI_GP:CAL13451.1;Name=CAL13451.1;gbkey=CDS;gene=gshB;product=glutathione synthetase;protein_id=CAL13451.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3741574	3741933	.	+	.	ID=id6056;Note=Pfam match to entry PF02951 GSH-S_N%2C Prokaryotic glutathione synthetase%2C N-terminal domain%2C score 245.7%2CE-value 4.1e-71;gbkey=misc_feature;gene=gshB;inference=protein motif:PFAM:PF02951
AM286415.1	EMBL	sequence_feature	3741940	3742491	.	+	.	ID=id6057;Note=Pfam match to entry PF02955 GSH-S_ATP%2C Prokaryotic glutathione synthetase%2C ATP-binding domain%2C score 256.6%2CE-value 2.3e-74;gbkey=misc_feature;gene=gshB;inference=protein motif:PFAM:PF02955
AM286415.1	EMBL	sequence_feature	3742366	3742389	.	+	.	ID=id6058;Note=PS00030 Eukaryotic putative RNA-binding region RNP-1 signature.;gbkey=misc_feature;gene=gshB;inference=protein motif:Prosite:PS00030
AM286415.1	EMBL	gene	3742839	3743402	.	+	.	ID=gene3380;Name=YE3428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3428
AM286415.1	EMBL	CDS	3742839	3743402	.	+	0	ID=cds3282;Parent=gene3380;Dbxref=EnsemblGenomes-Gn:YE3428,EnsemblGenomes-Tr:CAL13452,InterPro:IPR003774,NCBI_GP:CAL13452.1;Name=CAL13452.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13452.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3742839	3743399	.	+	.	ID=id6059;Note=Pfam match to entry PF02622 DUF179%2C Uncharacterized ACR%2C COG1678%2C score 304.4%2C E-value 8.7e-89;gbkey=misc_feature;inference=protein motif:PFAM:PF02622
AM286415.1	EMBL	gene	3743402	3743824	.	+	.	ID=gene3381;Name=YE3429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3429
AM286415.1	EMBL	CDS	3743402	3743824	.	+	0	ID=cds3283;Parent=gene3381;Dbxref=EnsemblGenomes-Gn:YE3429,EnsemblGenomes-Tr:CAL13453,GOA:A1JPT6,InterPro:IPR005227,InterPro:IPR006641,InterPro:IPR012337,NCBI_GP:CAL13453.1;Name=CAL13453.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13453.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3743411	3743812	.	+	.	ID=id6060;Note=Pfam match to entry PF03652 UPF0081%2CUncharacterised protein family (UPF0081)%2C score 231.9%2CE-value 6e-67;gbkey=misc_feature;inference=protein motif:PFAM:PF03652
AM286415.1	EMBL	gene	3744006	3744890	.	+	.	ID=gene3382;Name=YE3430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3430
AM286415.1	EMBL	CDS	3744006	3744890	.	+	0	ID=cds3284;Parent=gene3382;Dbxref=EnsemblGenomes-Gn:YE3430,EnsemblGenomes-Tr:CAL13454,GOA:A1JPT8,InterPro:IPR003010,InterPro:IPR017755,UniProtKB/TrEMBL:A1JPT8,NCBI_GP:CAL13454.1;Name=CAL13454.1;gbkey=CDS;product=putative carbon-nitrogen hydrolase;protein_id=CAL13454.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3744012	3744851	.	+	.	ID=id6061;Note=Pfam match to entry PF00795 CN_hydrolase%2CCarbon-nitrogen hydrolase%2C score 271.8%2C E-value 5.8e-79;gbkey=misc_feature;inference=protein motif:PFAM:PF00795
AM286415.1	EMBL	gene	3744972	3746018	.	+	.	ID=gene3383;Name=YE3431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3431
AM286415.1	EMBL	CDS	3744972	3746018	.	+	0	ID=cds3285;Parent=gene3383;Dbxref=EnsemblGenomes-Gn:YE3431,EnsemblGenomes-Tr:CAL13455,GOA:A1JPT9,InterPro:IPR007466,InterPro:IPR017754,UniProtKB/TrEMBL:A1JPT9,NCBI_GP:CAL13455.1;Name=CAL13455.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13455.1;transl_table=11
AM286415.1	EMBL	gene	3746333	3747385	.	-	.	ID=gene3384;Name=YE3432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3432
AM286415.1	EMBL	CDS	3746333	3747385	.	-	0	ID=cds3286;Parent=gene3384;Dbxref=EnsemblGenomes-Gn:YE3432,EnsemblGenomes-Tr:CAL13456,GOA:A1JPU0,InterPro:IPR001482,InterPro:IPR006321,InterPro:IPR027417,UniProtKB/TrEMBL:A1JPU0,NCBI_GP:CAL13456.1;Name=CAL13456.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13456.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3746528	3747364	.	-	.	ID=id6062;Note=Pfam match to entry PF00437 GSPII_E%2C Type II/IV secretion system protein%2C score 94.8%2C E-value 1.1e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF00437
AM286415.1	EMBL	sequence_feature	3746723	3746767	.	-	.	ID=id6063;Note=PS00662 Bacterial type II secretion system protein E signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00662
AM286415.1	EMBL	sequence_feature	3746933	3746956	.	-	.	ID=id6064;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3747486	3748181	.	+	.	ID=gene3385;Name=YE3433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3433
AM286415.1	EMBL	CDS	3747486	3748181	.	+	0	ID=cds3287;Parent=gene3385;Dbxref=EnsemblGenomes-Gn:YE3433,EnsemblGenomes-Tr:CAL13457,InterPro:IPR001608,InterPro:IPR011078,InterPro:IPR029066,UniProtKB/TrEMBL:A1JPU2,NCBI_GP:CAL13457.1;Name=CAL13457.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13457.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3747501	3748178	.	+	.	ID=id6065;Note=Pfam match to entry PF01168 UPF0001%2CUncharacterized protein family UPF0001%2C score 459.8%2CE-value 1.5e-135;gbkey=misc_feature;inference=protein motif:PFAM:PF01168
AM286415.1	EMBL	sequence_feature	3747723	3747767	.	+	.	ID=id6066;Note=PS01211 Uncharacterized protein family UPF0001 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01211
AM286415.1	EMBL	gene	3748217	3749038	.	+	.	ID=gene3386;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=YE3434
AM286415.1	EMBL	CDS	3748217	3749038	.	+	0	ID=cds3288;Parent=gene3386;Dbxref=EnsemblGenomes-Gn:YE3434,EnsemblGenomes-Tr:CAL13458,GOA:A1JPU3,InterPro:IPR000304,InterPro:IPR008927,InterPro:IPR016040,InterPro:IPR028939,InterPro:IPR029036,UniProtKB/TrEMBL:A1JPU3,NCBI_GP:CAL13458.1;Name=CAL13458.1;gbkey=CDS;gene=proC;product=putative pyrroline-5-carboxylate reductase;protein_id=CAL13458.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3748226	3748978	.	+	.	ID=id6067;Note=Pfam match to entry PF01089 P5CR%2C Delta 1-pyrroline-5-carboxylate reductase%2C score 316.6%2C E-value 1.8e-92;gbkey=misc_feature;gene=proC;inference=protein motif:PFAM:PF01089
AM286415.1	EMBL	sequence_feature	3748241	3748306	.	+	.	ID=id6068;Note=PS00107 Protein kinases ATP-binding region signature.;gbkey=misc_feature;gene=proC;inference=protein motif:Prosite:PS00107
AM286415.1	EMBL	sequence_feature	3748670	3748708	.	+	.	ID=id6069;Note=PS00933 FGGY family of carbohydrate kinases signature 1.;gbkey=misc_feature;gene=proC;inference=protein motif:Prosite:PS00933
AM286415.1	EMBL	sequence_feature	3748886	3748957	.	+	.	ID=id6070;Note=PS00521 Delta 1-pyrroline-5-carboxylate reductase signature.;gbkey=misc_feature;gene=proC;inference=protein motif:Prosite:PS00521
AM286415.1	EMBL	gene	3749167	3749721	.	+	.	ID=gene3387;Name=yggT;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=YE3435
AM286415.1	EMBL	CDS	3749167	3749721	.	+	0	ID=cds3289;Parent=gene3387;Dbxref=EnsemblGenomes-Gn:YE3435,EnsemblGenomes-Tr:CAL13459,GOA:A1JPU5,InterPro:IPR003425,UniProtKB/TrEMBL:A1JPU5,NCBI_GP:CAL13459.1;Name=CAL13459.1;gbkey=CDS;gene=yggT;product=putative membrane protein;protein_id=CAL13459.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3749167	3749412	.	+	.	ID=id6071;Note=Pfam match to entry PF02325 YGGT%2C YGGT family %2Cscore 88.9%2C E-value 6.8e-24;gbkey=misc_feature;gene=yggT;inference=protein motif:PFAM:PF02325
AM286415.1	EMBL	sequence_feature	3749170	3749238	.	+	.	ID=id6072;Note=4 probable transmembrane helices predicted for YE3435 by TMHMM2.0 at aa 2-24%2C 61-83%2C 90-112 and 161-183;gbkey=misc_feature;gene=yggT;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3749347	3749415	.	+	.	ID=id6072;Note=4 probable transmembrane helices predicted for YE3435 by TMHMM2.0 at aa 2-24%2C 61-83%2C 90-112 and 161-183;gbkey=misc_feature;gene=yggT;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3749434	3749502	.	+	.	ID=id6072;Note=4 probable transmembrane helices predicted for YE3435 by TMHMM2.0 at aa 2-24%2C 61-83%2C 90-112 and 161-183;gbkey=misc_feature;gene=yggT;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3749647	3749715	.	+	.	ID=id6072;Note=4 probable transmembrane helices predicted for YE3435 by TMHMM2.0 at aa 2-24%2C 61-83%2C 90-112 and 161-183;gbkey=misc_feature;gene=yggT;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3749452	3749694	.	+	.	ID=id6073;Note=Pfam match to entry PF02325 YGGT%2C YGGT family %2Cscore 87.9%2C E-value 1.3e-23;gbkey=misc_feature;gene=yggT;inference=protein motif:PFAM:PF02325
AM286415.1	EMBL	gene	3749718	3750008	.	+	.	ID=gene3388;Name=YE3436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3436
AM286415.1	EMBL	CDS	3749718	3750008	.	+	0	ID=cds3290;Parent=gene3388;Dbxref=EnsemblGenomes-Gn:YE3436,EnsemblGenomes-Tr:CAL13460,InterPro:IPR003746,InterPro:IPR005228,NCBI_GP:CAL13460.1;Name=CAL13460.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13460.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3749736	3749969	.	+	.	ID=id6074;Note=Pfam match to entry PF02594 DUF167%2C Uncharacterized ACR%2C YggU family COG1872%2C score 131.9%2C E-value 7.5e-37;gbkey=misc_feature;inference=protein motif:PFAM:PF02594
AM286415.1	EMBL	gene	3750245	3750838	.	+	.	ID=gene3389;Name=YE3437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3437
AM286415.1	EMBL	CDS	3750245	3750838	.	+	0	ID=cds3291;Parent=gene3389;Dbxref=EnsemblGenomes-Gn:YE3437,EnsemblGenomes-Tr:CAL13461,GOA:A1JPU8,InterPro:IPR002637,InterPro:IPR020922,InterPro:IPR029001,UniProtKB/TrEMBL:A1JPU8,NCBI_GP:CAL13461.1;Name=CAL13461.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13461.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3750254	3750826	.	+	.	ID=id6075;Note=Pfam match to entry PF01725 Ham1p_like%2C Ham1 family%2C score 369.0%2C E-value 3.2e-108;gbkey=misc_feature;inference=protein motif:PFAM:PF01725
AM286415.1	EMBL	gene	3750831	3751961	.	+	.	ID=gene3390;Name=YE3438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3438
AM286415.1	EMBL	CDS	3750831	3751961	.	+	0	ID=cds3292;Parent=gene3390;Dbxref=EnsemblGenomes-Gn:YE3438,EnsemblGenomes-Tr:CAL13462,GOA:A1JPU9,InterPro:IPR004559,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR010723,InterPro:IPR023404,UniProtKB/TrEMBL:A1JPU9,NCBI_GP:CAL13462.1;Name=CAL13462.1;gbkey=CDS;product=putative oxygen-independent coproporphyrinogen III oxidase;protein_id=CAL13462.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3750987	3751682	.	+	.	ID=id6076;Note=Pfam match to entry PF02473 Coprogen_an_ox%2COxygen-independent Coproporphyrinogen III oxidase%2C score -13.2%2C E-value 1.2e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF02473
AM286415.1	EMBL	gene	3752051	3752791	.	-	.	ID=gene3391;Name=YE3439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3439
AM286415.1	EMBL	CDS	3752051	3752791	.	-	0	ID=cds3293;Parent=gene3391;Dbxref=EnsemblGenomes-Gn:YE3439,EnsemblGenomes-Tr:CAL13463,InterPro:IPR021307,UniProtKB/TrEMBL:A1JPV0,NCBI_GP:CAL13463.1;Name=CAL13463.1;Note=Similar to Salmonella typhi hypothetical protein Sty3262 SWALL:Q8Z3U3 (EMBL:AL627277) (239 aa) fasta scores: E(): 1.8e-50%2C 62.86 38d in 237 aa%2C and to Salmonella typhimurium putative periplasmic protein yggn or stm3107 SWALL:Q8ZM42 (EMBL:AE008842) (239 aa) fasta scores: E(): 3.5e-50%2C 62.44 38d in 237 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627277;product=putative exported protein;protein_id=CAL13463.1;transl_table=11
AM286415.1	EMBL	gene	3752894	3753796	.	-	.	ID=gene3392;Name=YE3440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3440
AM286415.1	EMBL	CDS	3752894	3753796	.	-	0	ID=cds3294;Parent=gene3392;Dbxref=EnsemblGenomes-Gn:YE3440,EnsemblGenomes-Tr:CAL13464,GOA:A1JPV1,InterPro:IPR012338,InterPro:IPR015868,UniProtKB/TrEMBL:A1JPV1,NCBI_GP:CAL13464.1;Name=CAL13464.1;gbkey=CDS;product=putative glutaminase;protein_id=CAL13464.1;transl_table=11
AM286415.1	EMBL	gene	3753950	3754276	.	-	.	ID=gene3393;Name=YE3441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3441
AM286415.1	EMBL	CDS	3753950	3754276	.	-	0	ID=cds3295;Parent=gene3393;Dbxref=EnsemblGenomes-Gn:YE3441,EnsemblGenomes-Tr:CAL13465,InterPro:IPR007416,UniProtKB/TrEMBL:A1JPV3,NCBI_GP:CAL13465.1;Name=CAL13465.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13465.1;transl_table=11
AM286415.1	EMBL	gene	3754276	3754995	.	-	.	ID=gene3394;Name=YE3442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3442
AM286415.1	EMBL	CDS	3754276	3754995	.	-	0	ID=cds3296;Parent=gene3394;Dbxref=EnsemblGenomes-Gn:YE3442,EnsemblGenomes-Tr:CAL13466,GOA:A1JPV4,InterPro:IPR003358,InterPro:IPR029063,NCBI_GP:CAL13466.1;Name=CAL13466.1;gbkey=CDS;product=Putative methyltransferase;protein_id=CAL13466.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3754282	3754872	.	-	.	ID=id6077;Note=Pfam match to entry PF02390 Methyltransf_4%2CPutative methyltransferase%2C score 326.6%2C E-value 1.8e-95;gbkey=misc_feature;inference=protein motif:PFAM:PF02390
AM286415.1	EMBL	gene	3755473	3756561	.	+	.	ID=gene3395;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;gene_synonym=mutB;locus_tag=YE3443
AM286415.1	EMBL	CDS	3755473	3756561	.	+	0	ID=cds3297;Parent=gene3395;Dbxref=EnsemblGenomes-Gn:YE3443,EnsemblGenomes-Tr:CAL13467,GOA:A1JPV5,InterPro:IPR000445,InterPro:IPR003265,InterPro:IPR003583,InterPro:IPR003651,InterPro:IPR004035,InterPro:IPR004036,InterPro:IPR005760,InterPro:IPR011257,InterPro:IPR015797,InterPro:IPR023170,InterPro:IPR029119,UniProtKB/TrEMBL:A1JPV5,NCBI_GP:CAL13467.1;Name=CAL13467.1;gbkey=CDS;gene=mutY;product=A/G-specific adenine glycosylase;protein_id=CAL13467.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3755563	3756039	.	+	.	ID=id6078;Note=Pfam match to entry PF00730 HhH-GPD%2C HhH-GPD superfamily base excision DNA repair protein%2C score 218.1%2C E-value 8.3e-63;gbkey=misc_feature;gene=mutY;inference=protein motif:PFAM:PF00730
AM286415.1	EMBL	sequence_feature	3756046	3756096	.	+	.	ID=id6079;Note=PS00764 Endonuclease III iron-sulfur binding region signature.;gbkey=misc_feature;gene=mutY;inference=protein motif:Prosite:PS00764
AM286415.1	EMBL	gene	3756626	3756898	.	+	.	ID=gene3396;Name=YE3444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3444
AM286415.1	EMBL	CDS	3756626	3756898	.	+	0	ID=cds3298;Parent=gene3396;Dbxref=EnsemblGenomes-Gn:YE3444,EnsemblGenomes-Tr:CAL13468,GOA:A1JPV6,InterPro:IPR007457,NCBI_GP:CAL13468.1;Name=CAL13468.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13468.1;transl_table=11
AM286415.1	EMBL	gene	3757024	3758112	.	+	.	ID=gene3397;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=YE3445
AM286415.1	EMBL	CDS	3757024	3758112	.	+	0	ID=cds3299;Parent=gene3397;Dbxref=EnsemblGenomes-Gn:YE3445,EnsemblGenomes-Tr:CAL13469,GOA:A1JPV7,InterPro:IPR000189,InterPro:IPR008258,InterPro:IPR023346,InterPro:IPR023664,InterPro:IPR024570,NCBI_GP:CAL13469.1;Name=CAL13469.1;gbkey=CDS;gene=mltC;product=membrane-bound lytic murein transglycosylase C;protein_id=CAL13469.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3757054	3757086	.	+	.	ID=id6080;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=mltC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3757612	3757998	.	+	.	ID=id6081;Note=Pfam match to entry PF01464 SLT%2C Transglycosylase SLT domain%2C score 160.5%2C E-value 1.9e-45;gbkey=misc_feature;gene=mltC;inference=protein motif:PFAM:PF01464
AM286415.1	EMBL	sequence_feature	3757669	3757755	.	+	.	ID=id6082;Note=PS00922 Prokaryotic transglycosylases signature.;gbkey=misc_feature;gene=mltC;inference=protein motif:Prosite:PS00922
AM286415.1	EMBL	gene	3758283	3759032	.	+	.	ID=gene3398;Name=YE3446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3446
AM286415.1	EMBL	CDS	3758283	3759032	.	+	0	ID=cds3300;Parent=gene3398;Dbxref=EnsemblGenomes-Gn:YE3446,EnsemblGenomes-Tr:CAL13470,GOA:A1JPV9,InterPro:IPR002781,UniProtKB/TrEMBL:A1JPV9,NCBI_GP:CAL13470.1;Name=CAL13470.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa3775 SWALL:Q9HXM0 (EMBL:AE004796) (260 aa) fasta scores: E(): 2.5e-36%2C 44.35 38d in 248 aa%2C and to Escherichia coli O157:H7 z5415 protein z5415 or ecs4801 SWALL:Q8X8E6 (EMBL:AE005619) (291 aa) fasta scores: E(): 9.4e-09%2C 24.58 38d in 240 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005619;product=putative membrane protein;protein_id=CAL13470.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3758319	3758387	.	+	.	ID=id6083;Note=8 probable transmembrane helices predicted for YE3446 by TMHMM2.0 at aa 4-26%2C 33-55%2C 70-87%2C 92-109%2C124-146%2C 165-184%2C 188-210 and 217-239;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3758406	3758474	.	+	.	ID=id6083;Note=8 probable transmembrane helices predicted for YE3446 by TMHMM2.0 at aa 4-26%2C 33-55%2C 70-87%2C 92-109%2C124-146%2C 165-184%2C 188-210 and 217-239;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3758517	3758570	.	+	.	ID=id6083;Note=8 probable transmembrane helices predicted for YE3446 by TMHMM2.0 at aa 4-26%2C 33-55%2C 70-87%2C 92-109%2C124-146%2C 165-184%2C 188-210 and 217-239;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3758583	3758636	.	+	.	ID=id6083;Note=8 probable transmembrane helices predicted for YE3446 by TMHMM2.0 at aa 4-26%2C 33-55%2C 70-87%2C 92-109%2C124-146%2C 165-184%2C 188-210 and 217-239;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3758679	3758747	.	+	.	ID=id6083;Note=8 probable transmembrane helices predicted for YE3446 by TMHMM2.0 at aa 4-26%2C 33-55%2C 70-87%2C 92-109%2C124-146%2C 165-184%2C 188-210 and 217-239;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3758802	3758861	.	+	.	ID=id6083;Note=8 probable transmembrane helices predicted for YE3446 by TMHMM2.0 at aa 4-26%2C 33-55%2C 70-87%2C 92-109%2C124-146%2C 165-184%2C 188-210 and 217-239;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3758871	3758939	.	+	.	ID=id6083;Note=8 probable transmembrane helices predicted for YE3446 by TMHMM2.0 at aa 4-26%2C 33-55%2C 70-87%2C 92-109%2C124-146%2C 165-184%2C 188-210 and 217-239;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3758958	3759026	.	+	.	ID=id6083;Note=8 probable transmembrane helices predicted for YE3446 by TMHMM2.0 at aa 4-26%2C 33-55%2C 70-87%2C 92-109%2C124-146%2C 165-184%2C 188-210 and 217-239;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	3759101	3761263	.	-	.	ID=gene3399;Name=speC;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=YE3447
AM286415.1	EMBL	CDS	3759101	3761263	.	-	0	ID=cds3301;Parent=gene3399;Dbxref=EnsemblGenomes-Gn:YE3447,EnsemblGenomes-Tr:CAL13471,GOA:A1JPW0,InterPro:IPR000310,InterPro:IPR005308,InterPro:IPR008286,InterPro:IPR011006,InterPro:IPR011193,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR027464,InterPro:IPR027568,UniProtKB/TrEMBL:A1JPW0,NCBI_GP:CAL13471.1;Name=CAL13471.1;gbkey=CDS;gene=speC;product=ornithine decarboxylase;protein_id=CAL13471.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3759137	3759538	.	-	.	ID=id6084;Note=Pfam match to entry PF03711 OKR_DC_1_C%2C Orn/Lys/Arg decarboxylase%2C C-terminal domain%2C score 262.9%2C E-value 2.9e-76;gbkey=misc_feature;gene=speC;inference=protein motif:PFAM:PF03711
AM286415.1	EMBL	sequence_feature	3759560	3760939	.	-	.	ID=id6085;Note=Pfam match to entry PF01276 OKR_DC_1%2C Orn/Lys/Arg decarboxylase%2C major domain%2C score 976.2%2C E-value 5.1e-291;gbkey=misc_feature;gene=speC;inference=protein motif:PFAM:PF01276
AM286415.1	EMBL	sequence_feature	3760172	3760216	.	-	.	ID=id6086;Note=PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site.;gbkey=misc_feature;gene=speC;inference=protein motif:Prosite:PS00703
AM286415.1	EMBL	sequence_feature	3760955	3761263	.	-	.	ID=id6087;Note=Pfam match to entry PF03709 OKR_DC_1_N%2C Orn/Lys/Arg decarboxylase%2C N-terminal domain%2C score 76.6%2C E-value 3.4e-20;gbkey=misc_feature;gene=speC;inference=protein motif:PFAM:PF03709
AM286415.1	EMBL	sequence_feature	3761922	3960673	.	+	.	ID=id6088;Note=The plasticity zone%3B PZ;gbkey=misc_feature;standard_name=PZ
AM286415.1	EMBL	sequence_feature	3761922	3828092	.	+	.	ID=id6089;Note=The pathogenicity island YAPI;gbkey=misc_feature
AM286415.1	EMBL	gene	3761922	3761997	.	+	.	ID=gene3400;Name=tRNA-Phe (GAA);gbkey=Gene;gene=tRNA-Phe (GAA);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	3761922	3761997	.	+	.	ID=rna129;Parent=gene3400;gbkey=tRNA;gene=tRNA-Phe (GAA);product=tRNA-Phe
AM286415.1	EMBL	exon	3761922	3761997	.	+	.	ID=id6090;Parent=rna129;gbkey=tRNA;gene=tRNA-Phe (GAA);product=tRNA-Phe
AM286415.1	EMBL	gene	3762254	3763237	.	-	.	ID=gene3401;Name=YE3450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3450
AM286415.1	EMBL	CDS	3762254	3763237	.	-	0	ID=cds3302;Parent=gene3401;Dbxref=EnsemblGenomes-Gn:YE3450,EnsemblGenomes-Tr:CAL13472,GOA:A1JPX0,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,UniProtKB/TrEMBL:A1JPX0,NCBI_GP:CAL13472.1;Name=CAL13472.1;gbkey=CDS;product=phage integrase;protein_id=CAL13472.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3762323	3762445	.	-	.	ID=id6091;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 28.9%2C E-value 4.1e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	3763267	3764463	.	-	.	ID=gene3402;Name=YE3451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3451
AM286415.1	EMBL	CDS	3763267	3764463	.	-	0	ID=cds3303;Parent=gene3402;Dbxref=EnsemblGenomes-Gn:YE3451,EnsemblGenomes-Tr:CAL13473,InterPro:IPR011093,InterPro:IPR011119,InterPro:IPR022391,UniProtKB/TrEMBL:A1JPX1,NCBI_GP:CAL13473.1;Name=CAL13473.1;Note=Similar to Xanthomonas campestris pv. campestris str. ATCC 33913 conserved hypothetical protein xcc3121 SWALL:AAM42392 (EMBL:AE012427) (340 aa) fasta scores: E(): 6.5e-22%2C 35.71 38d in 252 aa%2C and to Salmonella typhi hypothetical protein Sty4665 sty4665 SWALL:Q8Z1C5 (EMBL:AL627283) (529 aa) fasta scores: E(): 8.2e-25%2C26.57 38d in 493 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627283;product=conserved hypothetical protein;protein_id=CAL13473.1;transl_table=11
AM286415.1	EMBL	gene	3764827	3765171	.	+	.	ID=gene3403;Name=YE3452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3452
AM286415.1	EMBL	CDS	3764827	3765171	.	+	0	ID=cds3304;Parent=gene3403;Dbxref=EnsemblGenomes-Gn:YE3452,EnsemblGenomes-Tr:CAL13474,GOA:A1JPX2,InterPro:IPR014944,UniProtKB/TrEMBL:A1JPX2,NCBI_GP:CAL13474.1;Name=CAL13474.1;Note=No significant database matches;gbkey=CDS;product=hypothetical protein;protein_id=CAL13474.1;transl_table=11
AM286415.1	EMBL	gene	3765220	3765561	.	-	.	ID=gene3404;Name=YE3453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3453
AM286415.1	EMBL	CDS	3765220	3765561	.	-	0	ID=cds3305;Parent=gene3404;Dbxref=EnsemblGenomes-Gn:YE3453,EnsemblGenomes-Tr:CAL13475,UniProtKB/TrEMBL:A1JPX3,NCBI_GP:CAL13475.1;Name=CAL13475.1;Note=Weakly similar to Rattus norvegicus von ebner's gland protein 1 precursor VegP1 or VegP SWALL:VEG1_RAT (SWALL:P20289) (177 aa) fasta scores: E(): 4%2C 26.54 38d in 113 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P20289;product=hypothetical protein;protein_id=CAL13475.1;transl_table=11
AM286415.1	EMBL	gene	3765558	3767960	.	-	.	ID=gene3405;Name=YE3454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3454
AM286415.1	EMBL	CDS	3765558	3767960	.	-	0	ID=cds3306;Parent=gene3405;Dbxref=EnsemblGenomes-Gn:YE3454,EnsemblGenomes-Tr:CAL13476,InterPro:IPR006914,InterPro:IPR025157,UniProtKB/TrEMBL:A1JPX4,NCBI_GP:CAL13476.1;Name=CAL13476.1;Note=Similar to the C-terminal regions of Yersinia pestis putative hemolysin ypo2490 SWALL:Q8ZDR6 (EMBL:AJ414152) (2535 aa) fasta scores: E(): 4.6e-143%2C67.09 38d in 702 aa%2C and to Yersinia pestis putative adhesin ypo0599 SWALL:Q8ZIA8 (EMBL:AJ414143) (3295 aa) fasta scores: E(): 3e-102%2C 60.92 38d in 563 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414152;product=putative hemolysin;protein_id=CAL13476.1;transl_table=11
AM286415.1	EMBL	repeat_region	3768387	3768922	.	+	.	ID=id6092;Note=IS3-family insertion sequence element which has undergone considerable rearrangements/deletion events and is likely to be unactive. Note it is not possible to accurately predict the full extent of this IS element.;gbkey=repeat_region
AM286415.1	EMBL	pseudogene	3768387	3768605	.	+	.	ID=gene3406;Name=YE3455;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3455;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	3768609	3768686	.	+	.	ID=gene3406;Name=YE3455;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3455;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	3768387	3768605	.	+	0	ID=cds3307;Parent=gene3406;Dbxref=PSEUDO:CAL13477.1;Note=Similar to several including: Escherichia coli transposase InsE for insertion sequence IS3a/b/c/d/e/fa/fb SWALL:INSE_ECOLI (SWALL:P77681) (102 aa) fasta scores: E(): 2.4e-24%2C 80.8 38d in 99 aa and Salmonella typhimurium putative transposase Stm2768 SWALL:Q8ZMN6 (EMBL:AE008826) (99 aa) fasta scores: E(): 4e-25%2C 82.82 id in 99 aa. Note this CDS encodes a stop codon after codon 73.;gbkey=CDS;inference=similar to sequence:UniProtKB:P77681;product=transposase for IS3-like insertion sequence (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3768609	3768686	.	+	0	ID=cds3307;Parent=gene3406;Dbxref=PSEUDO:CAL13477.1;Note=Similar to several including: Escherichia coli transposase InsE for insertion sequence IS3a/b/c/d/e/fa/fb SWALL:INSE_ECOLI (SWALL:P77681) (102 aa) fasta scores: E(): 2.4e-24%2C 80.8 38d in 99 aa and Salmonella typhimurium putative transposase Stm2768 SWALL:Q8ZMN6 (EMBL:AE008826) (99 aa) fasta scores: E(): 4e-25%2C 82.82 id in 99 aa. Note this CDS encodes a stop codon after codon 73.;gbkey=CDS;inference=similar to sequence:UniProtKB:P77681;product=transposase for IS3-like insertion sequence (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	pseudogene	3768683	3768922	.	+	.	ID=gene3407;Name=YE3456;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE3456;pseudo=true
AM286415.1	EMBL	CDS	3768683	3768922	.	+	0	ID=cds3308;Parent=gene3407;Note=Similar to several including: Escherichia coli transposase InsF for insertion sequence IS3a/b/c/d/e/fa SWALL:INSF_ECOLI (SWALL:P05822) (288 aa) fasta scores: E(): 1e-19%2C 63.52 38d in 85 aa%2C and Shigella flexneri TnpB SWALL:Q9XCI3 (EMBL:AF141323) (130 aa) fasta scores: E(): 1e-24%2C 73.75 38d in 80 aa. Note this CDS has been deleted consequently its predicted product would lack the C-terminal 40 aa.;gbkey=CDS;inference=similar to sequence:UniProtKB:P05822;product=transposase for IS3-like insertion sequence (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	3769251	3769835	.	+	.	ID=gene3408;Name=YE3457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3457
AM286415.1	EMBL	CDS	3769251	3769835	.	+	0	ID=cds3309;Parent=gene3408;Dbxref=EnsemblGenomes-Gn:YE3457,EnsemblGenomes-Tr:CAL13479,UniProtKB/TrEMBL:A1JPX7,NCBI_GP:CAL13479.1;Name=CAL13479.1;Note=Weakly similar to Salmonella typhimurium PilK protein SWALL:O07369 (EMBL:AB027308) (196 aa) fasta scores: E(): 0.0016%2C 25.28 38d in 178 aa%2C and to Shigella sonnei PilK protein SWALL:Q9Z499 (EMBL:AB021078) (197 aa) fasta scores: E(): 0.0004%2C 26.92 38d in 182 aa;gbkey=CDS;inference=similar to sequence:INSDC:AB027308;product=putative membrane protein;protein_id=CAL13479.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3769254	3769322	.	+	.	ID=id6093;Note=2 probable transmembrane helices predicted for YE3457 by TMHMM2.0 at aa 2-24 and 28-50;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3769332	3769400	.	+	.	ID=id6093;Note=2 probable transmembrane helices predicted for YE3457 by TMHMM2.0 at aa 2-24 and 28-50;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	3769900	3770802	.	-	.	ID=gene3409;Name=YE3458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3458
AM286415.1	EMBL	CDS	3769900	3770802	.	-	0	ID=cds3310;Parent=gene3409;Dbxref=EnsemblGenomes-Gn:YE3458,EnsemblGenomes-Tr:CAL13480,InterPro:IPR009694,InterPro:IPR023136,UniProtKB/TrEMBL:A1JPX8,NCBI_GP:CAL13480.1;Name=CAL13480.1;Note=Similar to several proteins of undefined function including: Shigella sonnei YccB protein SWALL:Q9Z4E2 (EMBL:AB021078) (308 aa) fasta scores: E(): 1.9e-30%2C32.24 38d in 276 aa and to Salmonella typhimurium YfaB protein SWALL:BAB91618 (EMBL:AP005147) (308 aa) fasta scores: E(): 1.9e-30%2C 32.24 38d in 276 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP005147;product=conserved hypothetical protein;protein_id=CAL13480.1;transl_table=11
AM286415.1	EMBL	gene	3770903	3771190	.	-	.	ID=gene3410;Name=YE3459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3459
AM286415.1	EMBL	CDS	3770903	3771190	.	-	0	ID=cds3311;Parent=gene3410;Dbxref=EnsemblGenomes-Gn:YE3459,EnsemblGenomes-Tr:CAL13481,InterPro:IPR009610,UniProtKB/TrEMBL:A1JPX9,NCBI_GP:CAL13481.1;Name=CAL13481.1;Note=Weakly similar to several proteins of undefined function including: Escherichia coli hypothetical protein YkfI or b0245 SWALL:YKFI_ECOLI (SWALL:P77692) (113 aa) fasta scores: E(): 2e-08%2C 38.2 38d in 89 aa%2C and to Escherichia coli SWALL:Q9XB43 (EMBL:D83536) (108 aa) fasta scores: E(): 6.2e-08%2C 41.89 38d in 74 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77692;product=hypothetical protein;protein_id=CAL13481.1;transl_table=11
AM286415.1	EMBL	gene	3771187	3772188	.	-	.	ID=gene3411;Name=YE3460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3460
AM286415.1	EMBL	CDS	3771187	3772188	.	-	0	ID=cds3312;Parent=gene3411;Dbxref=EnsemblGenomes-Gn:YE3460,EnsemblGenomes-Tr:CAL13482,InterPro:IPR013610,InterPro:IPR017113,UniProtKB/TrEMBL:A1JPY0,NCBI_GP:CAL13482.1;Name=CAL13482.1;Note=Similar in parts to several DNA primases including: Xylella fastidiosa DNA primase Xf2061 SWALL:Q9PBS8 (EMBL:AE004022) (1371 aa) fasta scores: E(): 1.9e-26%2C35.93 38d in 320 aa and to Escherichia coli DNA primase TraC SWALL:TRC5_ECOLI (SWALL:P27190) (1448 aa) fasta scores: E(): 1.6e-20%2C 35.71 38d in 322 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P27190;product=hypothetical protein;protein_id=CAL13482.1;transl_table=11
AM286415.1	EMBL	gene	3772593	3773480	.	-	.	ID=gene3412;Name=YE3461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3461
AM286415.1	EMBL	CDS	3772593	3773480	.	-	0	ID=cds3313;Parent=gene3412;Dbxref=EnsemblGenomes-Gn:YE3461,EnsemblGenomes-Tr:CAL13483,GOA:A1JPY1,InterPro:IPR011010,InterPro:IPR024456,InterPro:IPR024457,UniProtKB/TrEMBL:A1JPY1,NCBI_GP:CAL13483.1;Name=CAL13483.1;gbkey=CDS;product=putative phage integrase;protein_id=CAL13483.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3772599	3773132	.	-	.	ID=id6094;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score -29.4%2C E-value 0.027;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	3775095	3776192	.	+	.	ID=gene3413;Name=YE3462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3462
AM286415.1	EMBL	CDS	3775095	3776192	.	+	0	ID=cds3314;Parent=gene3413;Dbxref=EnsemblGenomes-Gn:YE3462,EnsemblGenomes-Tr:CAL13484,GOA:A1JPY3,InterPro:IPR007358,UniProtKB/TrEMBL:A1JPY3,NCBI_GP:CAL13484.1;Name=CAL13484.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL13484.1;transl_table=11
AM286415.1	EMBL	gene	3776189	3777172	.	+	.	ID=gene3414;Name=YE3463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3463
AM286415.1	EMBL	CDS	3776189	3777172	.	+	0	ID=cds3315;Parent=gene3414;Dbxref=EnsemblGenomes-Gn:YE3463,EnsemblGenomes-Tr:CAL13485,GOA:A1JPY4,InterPro:IPR007685,UniProtKB/TrEMBL:A1JPY4,NCBI_GP:CAL13485.1;Name=CAL13485.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL13485.1;transl_table=11
AM286415.1	EMBL	gene	3777495	3777758	.	+	.	ID=gene3415;Name=YE3464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3464
AM286415.1	EMBL	CDS	3777495	3777758	.	+	0	ID=cds3316;Parent=gene3415;Dbxref=EnsemblGenomes-Gn:YE3464,EnsemblGenomes-Tr:CAL13486,UniProtKB/TrEMBL:A1JPY5,NCBI_GP:CAL13486.1;Name=CAL13486.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL13486.1;transl_table=11
AM286415.1	EMBL	gene	3777818	3779338	.	-	.	ID=gene3416;Name=YE3465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3465
AM286415.1	EMBL	CDS	3777818	3779338	.	-	0	ID=cds3317;Parent=gene3416;Dbxref=EnsemblGenomes-Gn:YE3465,EnsemblGenomes-Tr:CAL13487,InterPro:IPR012931,UniProtKB/TrEMBL:A1JPY6,NCBI_GP:CAL13487.1;Name=CAL13487.1;Note=Similar to Salmonella typhi putative membrane protein Sty4579 SWALL:Q8Z1I6 (EMBL:AL627282) (501 aa) fasta scores: E(): 3.7e-95%2C 45.4 38d in 511 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=putative membrane protein;protein_id=CAL13487.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3779213	3779281	.	-	.	ID=id6095;Note=5 probable transmembrane helices predicted for YE3465 by TMHMM2.0 at aa 20-42%2C 69-91%2C 355-377%2C 384-406 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3779066	3779134	.	-	.	ID=id6095;Note=5 probable transmembrane helices predicted for YE3465 by TMHMM2.0 at aa 20-42%2C 69-91%2C 355-377%2C 384-406 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3778208	3778276	.	-	.	ID=id6095;Note=5 probable transmembrane helices predicted for YE3465 by TMHMM2.0 at aa 20-42%2C 69-91%2C 355-377%2C 384-406 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3778121	3778189	.	-	.	ID=id6095;Note=5 probable transmembrane helices predicted for YE3465 by TMHMM2.0 at aa 20-42%2C 69-91%2C 355-377%2C 384-406 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3777935	3778003	.	-	.	ID=id6095;Note=5 probable transmembrane helices predicted for YE3465 by TMHMM2.0 at aa 20-42%2C 69-91%2C 355-377%2C 384-406 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	3779338	3780744	.	-	.	ID=gene3417;Name=YE3466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3466
AM286415.1	EMBL	CDS	3779338	3780744	.	-	0	ID=cds3318;Parent=gene3417;Dbxref=EnsemblGenomes-Gn:YE3466,EnsemblGenomes-Tr:CAL13488,InterPro:IPR021204,UniProtKB/TrEMBL:A1JPY7,NCBI_GP:CAL13488.1;Name=CAL13488.1;Note=Similar to Salmonella typhi hypothetical protein Sty4577 SWALL:Q8Z1I8 (EMBL:AL627282) (476 aa) fasta scores: E(): 3.2e-103%2C 63.08 38d in 447 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=putative exported protein;protein_id=CAL13488.1;transl_table=11
AM286415.1	EMBL	gene	3780765	3781718	.	-	.	ID=gene3418;Name=YE3467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3467
AM286415.1	EMBL	CDS	3780765	3781718	.	-	0	ID=cds3319;Parent=gene3418;Dbxref=EnsemblGenomes-Gn:YE3467,EnsemblGenomes-Tr:CAL13489,InterPro:IPR009649,InterPro:IPR026331,UniProtKB/TrEMBL:A1JPY8,NCBI_GP:CAL13489.1;Name=CAL13489.1;Note=Similar to Salmonella typhi hypothetical protein Sty4576 SWALL:Q8Z1I9 (EMBL:AL627282) (322 aa) fasta scores: E(): 1.9e-86%2C 63.72 38d in 317 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=putative exported protein;protein_id=CAL13489.1;transl_table=11
AM286415.1	EMBL	gene	3781715	3782068	.	-	.	ID=gene3419;Name=YE3468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3468
AM286415.1	EMBL	CDS	3781715	3782068	.	-	0	ID=cds3320;Parent=gene3419;Dbxref=EnsemblGenomes-Gn:YE3468,EnsemblGenomes-Tr:CAL13490,InterPro:IPR011090,UniProtKB/TrEMBL:A1JPZ0,NCBI_GP:CAL13490.1;Name=CAL13490.1;Note=Similar in the C-terminus to Salmonella typhi hypothetical protein Sty4575 SWALL:Q8Z1J0 (EMBL:AL627282) (130 aa) fasta scores: E(): 1.7e-09%2C 53.62 38d in 69 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=hypothetical protein;protein_id=CAL13490.1;transl_table=11
AM286415.1	EMBL	gene	3783946	3784299	.	+	.	ID=gene3420;Name=arsR2;gbkey=Gene;gene=arsR2;gene_biotype=protein_coding;locus_tag=YE3472
AM286415.1	EMBL	CDS	3783946	3784299	.	+	0	ID=cds3321;Parent=gene3420;Dbxref=EnsemblGenomes-Gn:YE3472,EnsemblGenomes-Tr:CAL13491,GOA:A1JPZ1,InterPro:IPR001845,InterPro:IPR011991,InterPro:IPR018334,UniProtKB/TrEMBL:A1JPZ1,NCBI_GP:CAL13491.1;Name=CAL13491.1;gbkey=CDS;gene=arsR2;product=arsenical resistance operon repressor;protein_id=CAL13491.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3783973	3784209	.	+	.	ID=id6096;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 111.5%2C E-value 1.1e-30;gbkey=misc_feature;gene=arsR2;inference=protein motif:PFAM:PF01022
AM286415.1	EMBL	sequence_feature	3784039	3784095	.	+	.	ID=id6097;Note=PS00846 Bacterial regulatory proteins%2C arsR family signature.;gbkey=misc_feature;gene=arsR2;inference=protein motif:Prosite:PS00846
AM286415.1	EMBL	gene	3784346	3784708	.	+	.	ID=gene3421;Name=arsD;gbkey=Gene;gene=arsD;gene_biotype=protein_coding;locus_tag=YE3472A
AM286415.1	EMBL	CDS	3784346	3784708	.	+	0	ID=cds3322;Parent=gene3421;Dbxref=EnsemblGenomes-Gn:YE3472A,EnsemblGenomes-Tr:CAL13492,GOA:A1JPZ2,InterPro:IPR010712,UniProtKB/TrEMBL:A1JPZ2,NCBI_GP:CAL13492.1;Name=CAL13492.1;Note=Similar to Escherichia coli arsenical resistance operon trans-acting repressor ArsD SWALL:ARD1_ECOLI (SWALL:P46003) (120 aa) fasta scores: E(): 1.1e-43%2C 94.16 id in 120 aa and to Salmonella typhimurium ArsD protein SWALL:BAB91570 (EMBL:AP005147) (120 aa) fasta scores: E(): 5.1e-44%2C 95 38d in 120 aa;gbkey=CDS;gene=arsD;inference=similar to sequence:UniProtKB:P46003;product=arsenical resistance operon trans-acting repressor;protein_id=CAL13492.1;transl_table=11
AM286415.1	EMBL	gene	3784726	3786477	.	+	.	ID=gene3422;Name=arsA2;gbkey=Gene;gene=arsA2;gene_biotype=protein_coding;locus_tag=YE3473
AM286415.1	EMBL	CDS	3784726	3786477	.	+	0	ID=cds3323;Parent=gene3422;Dbxref=EnsemblGenomes-Gn:YE3473,EnsemblGenomes-Tr:CAL13493,GOA:A1JPZ3,InterPro:IPR003593,InterPro:IPR016300,InterPro:IPR025723,InterPro:IPR027417,InterPro:IPR027541,UniProtKB/TrEMBL:A1JPZ3,NCBI_GP:CAL13493.1;Name=CAL13493.1;Note=Highly similar to Escherichia coli arsenical pump-driving ATPase ArsA SWALL:ARA1_ECOLI (SWALL:P08690) (583 aa) fasta scores: E(): 1.1e-198%2C 95.71 38d in 583 aa and to Acidiphilium multivorum arsenical pump-driving ATPase arsA SWALL:ARSA_ACIMU (SWALL:O50593) (583 aa) fasta scores: E(): 6.7e-181%2C 87.6 38d in 581 aa;gbkey=CDS;gene=arsA2;inference=similar to sequence:UniProtKB:P08690;product=arsenical pump-driving ATPase;protein_id=CAL13493.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3784747	3785616	.	+	.	ID=id6098;Note=Pfam match to entry PF02374 ArsA_ATPase%2CAnion-transporting ATPase%2C score 490.2%2C E-value 1e-144;gbkey=misc_feature;gene=arsA2;inference=protein motif:PFAM:PF02374
AM286415.1	EMBL	sequence_feature	3784768	3784791	.	+	.	ID=id6099;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=arsA2;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3785704	3786474	.	+	.	ID=id6100;Note=Pfam match to entry PF02374 ArsA_ATPase%2CAnion-transporting ATPase%2C score 59.1%2C E-value 1.7e-16;gbkey=misc_feature;gene=arsA2;inference=protein motif:PFAM:PF02374
AM286415.1	EMBL	sequence_feature	3785725	3785748	.	+	.	ID=id6101;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=arsA2;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3786526	3787815	.	+	.	ID=gene3423;Name=arsB2;gbkey=Gene;gene=arsB2;gene_biotype=protein_coding;locus_tag=YE3474
AM286415.1	EMBL	CDS	3786526	3787815	.	+	0	ID=cds3324;Parent=gene3423;Dbxref=EnsemblGenomes-Gn:YE3474,EnsemblGenomes-Tr:CAL13494,GOA:A1JPZ5,InterPro:IPR000802,UniProtKB/TrEMBL:A1JPZ5,NCBI_GP:CAL13494.1;Name=CAL13494.1;Note=Highly similar to Escherichia coli%2C and Escherichia coli O157:H7 arsenical pump membrane protein ArsB or arsf or b3502 or z4904 or ecs4374 SWALL:ARSB_ECOLI (SWALL:P37310) (429 aa) fasta scores: E(): 4.1e-145%2C91.84 38d in 429 aa%2C Salmonella typhimurium ArsB protein SWALL:BAB91586 (EMBL:AP005147) (429 aa) fasta scores: E(): 1.3e-151%2C 96.27 38d in 429 aa;gbkey=CDS;gene=arsB2;inference=similar to sequence:UniProtKB:P37310;product=arsenical pump membrane protein;protein_id=CAL13494.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3786532	3787800	.	+	.	ID=id6102;Note=Pfam match to entry PF02040 ArsB%2C Arsenical pump membrane protein%2C score 1107.1%2C E-value 0;gbkey=misc_feature;gene=arsB2;inference=protein motif:PFAM:PF02040
AM286415.1	EMBL	sequence_feature	3786586	3786654	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	3786667	3786735	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	3786796	3786855	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	3786865	3786918	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	3786937	3787005	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	3787048	3787116	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	3787195	3787248	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	3787258	3787311	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	3787345	3787413	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	3787471	3787530	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	3787726	3787794	.	+	.	ID=id6103;Note=11 probable transmembrane helices predicted for YE3474 by TMHMM2.0 at aa 21-43%2C 48-70%2C 91-110%2C 114-131%2C138-160%2C 175-197%2C 224-241%2C 245-262%2C 274-296%2C 316-335 and 401-423;gbkey=misc_feature;gene=arsB2;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	3786631	3786663	.	+	.	ID=id6104;Note=PS00626 Regulator of chromosome condensation (RCC1) signature 2.;gbkey=misc_feature;gene=arsB2;inference=protein motif:Prosite:PS00626
AM286415.1	EMBL	gene	3787828	3788253	.	+	.	ID=gene3424;Name=arsC2;gbkey=Gene;gene=arsC2;gene_biotype=protein_coding;locus_tag=YE3475
AM286415.1	EMBL	CDS	3787828	3788253	.	+	0	ID=cds3325;Parent=gene3424;Dbxref=EnsemblGenomes-Gn:YE3475,EnsemblGenomes-Tr:CAL13495,GOA:A1JPZ6,InterPro:IPR006659,InterPro:IPR006660,InterPro:IPR012336,UniProtKB/TrEMBL:A1JPZ6,NCBI_GP:CAL13495.1;Name=CAL13495.1;Note=Highly similar to Escherichia coli arsenate reductase ArsC SWALL:ARC1_ECOLI (SWALL:P08692) (141 aa) fasta scores: E(): 7.1e-51%2C 93.61 38d in 141 aa%2CAcidiphilium multivorum arsenate reductase ArsC SWALL:ARSC_ACIMU (SWALL:O50595) (141 aa) fasta scores: E(): 2.8e-50%2C 93.61 38d in 141 aa and to Yersinia enterocolitica arsenate reductase ArsC SWALL:ARSC_YEREN (SWALL:P74984) (141 aa) fasta scores: E(): 1.8e-46%2C 85.1 id in 141 aa;gbkey=CDS;gene=arsC2;inference=similar to sequence:UniProtKB:P74984;product=arsenate reductase;protein_id=CAL13495.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3787882	3788166	.	+	.	ID=id6105;Note=Pfam match to entry PF03960 ArsC%2C ArsC family %2Cscore 124.3%2C E-value 1.5e-34;gbkey=misc_feature;gene=arsC2;inference=protein motif:PFAM:PF03960
AM286415.1	EMBL	repeat_region	3788273	3789576	.	-	.	ID=id6106;Note=IS1330;gbkey=repeat_region
AM286415.1	EMBL	gene	3788299	3789492	.	-	.	ID=gene3425;Name=tpn1330;gbkey=Gene;gene=tpn1330;gene_biotype=protein_coding;locus_tag=YE3476
AM286415.1	EMBL	CDS	3788299	3789492	.	-	0	ID=cds3326;Parent=gene3425;Dbxref=EnsemblGenomes-Gn:YE3476,EnsemblGenomes-Tr:CAL13496,GOA:A1JMR7,InterPro:IPR002559,InterPro:IPR012337,UniProtKB/TrEMBL:A1JMR7,NCBI_GP:CAL13496.1;Name=CAL13496.1;Note=Previously sequenced as Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:Q8RSF5 (EMBL:AJ344215) (397 aa) fasta scores: E(): 1.4e-162%2C99.49 38d in 397 aa. Also similar to Shigella flexneri%2Cand Shigella flexneri 2A IS10 orf S0034 or Cp0027 SWALL:Q9AFX7 (EMBL:AF348706) (407 aa) fasta scores: E(): 6.8e-113%2C 68.26 38d in 397 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330;protein_id=CAL13496.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3788503	3789222	.	-	.	ID=id6107;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 54.3%2C E-value 1.7e-13;gbkey=misc_feature;gene=tpn1330;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	gene	3789694	3790404	.	-	.	ID=gene3426;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=YE3477
AM286415.1	EMBL	CDS	3789694	3790404	.	-	0	ID=cds3327;Parent=gene3426;Dbxref=EnsemblGenomes-Gn:YE3477,EnsemblGenomes-Tr:CAL13497,GOA:A1JPZ9,InterPro:IPR005025,InterPro:IPR014063,InterPro:IPR029039,UniProtKB/TrEMBL:A1JPZ9,NCBI_GP:CAL13497.1;Name=CAL13497.1;Note=Similar to Salmonella typhimurium ArsH arsenic resistance protein SWALL:BAB91594 (EMBL:AP005147) (216 aa) fasta scores: E(): 5.9e-81%2C 94.86 38d in 214 aa%2C and to Yersinia enterocolitica plasmid arsenic resistance protein ArsH SWALL:P74987 (EMBL:U58366) (232 aa) fasta scores: E(): 1.2e-70%2C 76.69 38d in 236 aa;gbkey=CDS;gene=arsH;inference=similar to sequence:INSDC:U58366;product=putative arsenic resistance protein;protein_id=CAL13497.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3789790	3790317	.	-	.	ID=id6108;Note=Pfam match to entry PF03358 FMN_red%2CNADPH-dependent FMN reductase%2C score 212.0%2C E-value 6e-61;gbkey=misc_feature;gene=arsH;inference=protein motif:PFAM:PF03358
AM286415.1	EMBL	gene	3790536	3790829	.	-	.	ID=gene3427;Name=YE3478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3478
AM286415.1	EMBL	CDS	3790536	3790829	.	-	0	ID=cds3328;Parent=gene3427;Dbxref=EnsemblGenomes-Gn:YE3478,EnsemblGenomes-Tr:CAL13498,GOA:A1JQ00,InterPro:IPR001845,InterPro:IPR011991,UniProtKB/TrEMBL:A1JQ00,NCBI_GP:CAL13498.1;Name=CAL13498.1;Note=Similar to Salmonella typhimurium hypothetical YcjA protein SWALL:BAB91595 (EMBL:AP005147) (107 aa) fasta scores: E(): 1.9e-34%2C 96.87 38d in 96 aa and to Rhizobium loti hypothetical protein Mll2166 SWALL:Q98J04 (EMBL:AP002999) (106 aa) fasta scores: E(): 4.3e-16%2C51.57 38d in 95 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP005147;product=conserved hypothetical protein;protein_id=CAL13498.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3790560	3790802	.	-	.	ID=id6109;Note=Pfam match to entry PF01022 HTH_5%2C Bacterial regulatory protein%2C arsR family%2C score 28.9%2C E-value 7.5e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01022
AM286415.1	EMBL	gene	3790936	3792069	.	+	.	ID=gene3428;Name=YE3479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3479
AM286415.1	EMBL	CDS	3790936	3792069	.	+	0	ID=cds3329;Parent=gene3428;Dbxref=EnsemblGenomes-Gn:YE3479,EnsemblGenomes-Tr:CAL13499,InterPro:IPR005524,InterPro:IPR016196,UniProtKB/TrEMBL:A1JQ01,NCBI_GP:CAL13499.1;Name=CAL13499.1;Note=Similar to several including: Salmonella typhimurium YdaA hypothetical protein SWALL:BAB91596 (EMBL:AP005147) (377 aa) fasta scores: E(): 3e-117%2C 86.73 id in 377 aa and to Methanosarcina acetivorans hypothetical protein Ma3941 SWALL:AAM07292 (EMBL:AE011105) (323 aa) fasta scores: E(): 1.1e-11%2C 25.73 38d in 373 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP005147;product=putative membrane transport protein;protein_id=CAL13499.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3790951	3792060	.	+	.	ID=id6110;Note=Pfam match to entry PF03773 DUF318%2C Predicted permease%2C score 129.5%2C E-value 3.9e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF03773
AM286415.1	EMBL	sequence_feature	3790978	3791043	.	+	.	ID=id6111;Note=8 probable transmembrane helices predicted for YE3479 by TMHMM2.0 at aa 15-36%2C 56-78%2C 88-110%2C 117-136%2C259-279%2C 292-314%2C 324-346 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3791101	3791169	.	+	.	ID=id6111;Note=8 probable transmembrane helices predicted for YE3479 by TMHMM2.0 at aa 15-36%2C 56-78%2C 88-110%2C 117-136%2C259-279%2C 292-314%2C 324-346 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3791197	3791265	.	+	.	ID=id6111;Note=8 probable transmembrane helices predicted for YE3479 by TMHMM2.0 at aa 15-36%2C 56-78%2C 88-110%2C 117-136%2C259-279%2C 292-314%2C 324-346 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3791284	3791343	.	+	.	ID=id6111;Note=8 probable transmembrane helices predicted for YE3479 by TMHMM2.0 at aa 15-36%2C 56-78%2C 88-110%2C 117-136%2C259-279%2C 292-314%2C 324-346 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3791710	3791772	.	+	.	ID=id6111;Note=8 probable transmembrane helices predicted for YE3479 by TMHMM2.0 at aa 15-36%2C 56-78%2C 88-110%2C 117-136%2C259-279%2C 292-314%2C 324-346 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3791809	3791877	.	+	.	ID=id6111;Note=8 probable transmembrane helices predicted for YE3479 by TMHMM2.0 at aa 15-36%2C 56-78%2C 88-110%2C 117-136%2C259-279%2C 292-314%2C 324-346 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3791905	3791973	.	+	.	ID=id6111;Note=8 probable transmembrane helices predicted for YE3479 by TMHMM2.0 at aa 15-36%2C 56-78%2C 88-110%2C 117-136%2C259-279%2C 292-314%2C 324-346 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3791992	3792060	.	+	.	ID=id6111;Note=8 probable transmembrane helices predicted for YE3479 by TMHMM2.0 at aa 15-36%2C 56-78%2C 88-110%2C 117-136%2C259-279%2C 292-314%2C 324-346 and 353-375;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	3792208	3792522	.	-	.	ID=gene3429;Name=ccdB;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=YE3480
AM286415.1	EMBL	CDS	3792208	3792522	.	-	0	ID=cds3330;Parent=gene3429;Dbxref=EnsemblGenomes-Gn:YE3480,EnsemblGenomes-Tr:CAL13500,GOA:A1JQ03,InterPro:IPR002712,InterPro:IPR011067,UniProtKB/TrEMBL:A1JQ03,NCBI_GP:CAL13500.1;Name=CAL13500.1;Note=Similar to several toxin/antitoxin system proteins including: Escherichia coli%2C and Escherichia coli O157:H7 cytotoxic protein CcdB or LetB or G SWALL:CCDB_ECOLI (SWALL:P05703) (101 aa) fasta scores: E(): 4e-06%2C 36.63 id in 101 aa%2C Escherichia coli O157:H7 putative toxin of gyrase inhibiting toxin-antitoxin system z0057 or ecs0053 SWALL:Q8XA16 (EMBL:AE005182) (104 aa) fasta scores: E(): 9.4e-22%2C 54.8 38d in 104 aa and to Salmonella enterica subsp. enterica serovar Choleraesuis LetB letB SWALL:Q9EUE9 (EMBL:AB040415) (101 aa) fasta scores: E(): 4e-06%2C 33.65 38d in 104 aa;gbkey=CDS;gene=ccdB;inference=similar to sequence:UniProtKB:P05703;product=cytotoxic protein;protein_id=CAL13500.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3792211	3792522	.	-	.	ID=id6112;Note=Pfam match to entry PF01845 CcdB%2C CcdB protein %2Cscore 39.6%2C E-value 4.7e-09;gbkey=misc_feature;gene=ccdB;inference=protein motif:PFAM:PF01845
AM286415.1	EMBL	gene	3792525	3792761	.	-	.	ID=gene3430;Name=ccdA;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=YE3481
AM286415.1	EMBL	CDS	3792525	3792761	.	-	0	ID=cds3331;Parent=gene3430;Dbxref=EnsemblGenomes-Gn:YE3481,EnsemblGenomes-Tr:CAL13501,InterPro:IPR009956,UniProtKB/TrEMBL:A1JQ04,NCBI_GP:CAL13501.1;Name=CAL13501.1;Note=Similar to several toxin/antitoxin system proteins including: Escherichia coli%2C and Escherichia coli O157:H7 ccda protein CcdA or LetA or H SWALL:CCDA_ECOLI (SWALL:P05702) (72 aa) fasta scores: E(): 0.013%2C 26.47 38d in 68 aa and to Escherichia coli O157:H7 putative antitoxin of gyrase inhibiting toxin-antitoxin system Z0056 or ecs0052 SWALL:Q8XA17 (EMBL:AE005182) (77 aa) fasta scores: E(): 1.6e-15%2C 60.52 38d in 76 aa;gbkey=CDS;gene=ccdA;inference=similar to sequence:UniProtKB:P05702;product=gyrase inhibitor antitoxin;protein_id=CAL13501.1;transl_table=11
AM286415.1	EMBL	gene	3793238	3795880	.	-	.	ID=gene3431;Name=YE3482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3482
AM286415.1	EMBL	CDS	3793238	3795880	.	-	0	ID=cds3332;Parent=gene3431;Dbxref=EnsemblGenomes-Gn:YE3482,EnsemblGenomes-Tr:CAL13502,InterPro:IPR022303,InterPro:IPR025955,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ05,NCBI_GP:CAL13502.1;Name=CAL13502.1;Note=Similar to Salmonella typhi hypothetical protein Sty4573 SWALL:Q8Z1J2 (EMBL:AL627282) (807 aa) fasta scores: E(): 1.7e-214%2C 66.5 38d in 806 aa%2C and to Xanthomonas axonopodis hypothetical protein Xac2274 xac2274 SWALL:Q8PKA1 (EMBL:AE011864) (897 aa) fasta scores: E(): 2.9e-143%2C 52.44 38d in 900 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=Conserved hypothetical protein;protein_id=CAL13502.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3794480	3794503	.	-	.	ID=id6113;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3796042	3796446	.	-	.	ID=gene3432;Name=YE3483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3483
AM286415.1	EMBL	CDS	3796042	3796446	.	-	0	ID=cds3333;Parent=gene3432;Dbxref=EnsemblGenomes-Gn:YE3483,EnsemblGenomes-Tr:CAL13503,InterPro:IPR022262,UniProtKB/TrEMBL:A1JQ06,NCBI_GP:CAL13503.1;Name=CAL13503.1;Note=Similar in parts to Salmonella typhi putative lipoprotein Sty4571 SWALL:Q8Z1J4 (EMBL:AL627282) (147 aa) fasta scores: E(): 2.1e-25%2C 54.26 38d in 129 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=putative lipoprotein;protein_id=CAL13503.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3796378	3796410	.	-	.	ID=id6114;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3796456	3797913	.	-	.	ID=gene3433;Name=YE3484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3484
AM286415.1	EMBL	CDS	3796456	3797913	.	-	0	ID=cds3334;Parent=gene3433;Dbxref=EnsemblGenomes-Gn:YE3484,EnsemblGenomes-Tr:CAL13504,InterPro:IPR021207,UniProtKB/TrEMBL:A1JQ07,NCBI_GP:CAL13504.1;Name=CAL13504.1;Note=Similar to Salmonella typhi putative exported protein Sty4570 SWALL:Q8Z1J5 (EMBL:AL627282) (492 aa) fasta scores: E(): 2.5e-68%2C 50.9 38d in 495 aa and to Pseudomonas putida hypothetical 51.2 kDa protein SWALL:Q8VMJ2 (EMBL:AJ344068) (482 aa) fasta scores: E(): 4e-23%2C 39.8 38d in 412 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=conserved hypothetical protein;protein_id=CAL13504.1;transl_table=11
AM286415.1	EMBL	gene	3797961	3798827	.	-	.	ID=gene3434;Name=YE3485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3485
AM286415.1	EMBL	CDS	3797961	3798827	.	-	0	ID=cds3335;Parent=gene3434;Dbxref=EnsemblGenomes-Gn:YE3485,EnsemblGenomes-Tr:CAL13505,InterPro:IPR021844,UniProtKB/TrEMBL:A1JQ08,NCBI_GP:CAL13505.1;Name=CAL13505.1;Note=Similar to Salmonella typhi hypothetical protein Sty4569 SWALL:Q8Z1J6 (EMBL:AL627282) (299 aa) fasta scores: E(): 1.8e-54%2C 58.36 38d in 269 aa and to Pseudomonas putida hypothetical 31.9 kDa protein SWALL:Q8VMJ1 (EMBL:AJ344068) (302 aa) fasta scores: E(): 1e-40%2C 47.9 38d in 263 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=putative exported protein;protein_id=CAL13505.1;transl_table=11
AM286415.1	EMBL	gene	3798824	3799477	.	-	.	ID=gene3435;Name=YE3486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3486
AM286415.1	EMBL	CDS	3798824	3799477	.	-	0	ID=cds3336;Parent=gene3435;Dbxref=EnsemblGenomes-Gn:YE3486,EnsemblGenomes-Tr:CAL13506,InterPro:IPR021548,UniProtKB/TrEMBL:A1JQ10,NCBI_GP:CAL13506.1;Name=CAL13506.1;Note=Similar to Salmonella typhi possible exported protein Sty4568 SWALL:Q8Z1J7 (EMBL:AL627282) (217 aa) fasta scores: E(): 1.6e-64%2C 66.82 38d in 214 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=putative membrane protein;protein_id=CAL13506.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3799367	3799420	.	-	.	ID=id6115;Note=1 probable transmembrane helix predicted for YE3486 by TMHMM2.0 at aa 20-37;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3799474	3799848	.	-	.	ID=gene3436;Name=YE3487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3487
AM286415.1	EMBL	CDS	3799474	3799848	.	-	0	ID=cds3337;Parent=gene3436;Dbxref=EnsemblGenomes-Gn:YE3487,EnsemblGenomes-Tr:CAL13507,InterPro:IPR021877,UniProtKB/TrEMBL:A1JQ11,NCBI_GP:CAL13507.1;Name=CAL13507.1;Note=no significant database hits;gbkey=CDS;product=putative inner membrane protein;protein_id=CAL13507.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3799705	3799773	.	-	.	ID=id6116;Note=2 probable transmembrane helices predicted for YE3487 by TMHMM2.0 at aa 26-48 and 52-74;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3799627	3799695	.	-	.	ID=id6116;Note=2 probable transmembrane helices predicted for YE3487 by TMHMM2.0 at aa 26-48 and 52-74;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	3799858	3800208	.	-	.	ID=gene3437;Name=YE3488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3488
AM286415.1	EMBL	CDS	3799858	3800208	.	-	0	ID=cds3338;Parent=gene3437;Dbxref=EnsemblGenomes-Gn:YE3488,EnsemblGenomes-Tr:CAL13508,InterPro:IPR021356,UniProtKB/TrEMBL:A1JQ12,NCBI_GP:CAL13508.1;Name=CAL13508.1;Note=no significant database hits;gbkey=CDS;product=putative exported protein;protein_id=CAL13508.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3799981	3800049	.	-	.	ID=id6117;Note=2 probable transmembrane helices predicted for YE3488 by TMHMM2.0 at aa 54-76 and 91-110;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3799879	3799938	.	-	.	ID=id6117;Note=2 probable transmembrane helices predicted for YE3488 by TMHMM2.0 at aa 54-76 and 91-110;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	3800224	3800472	.	-	.	ID=gene3438;Name=YE3489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3489
AM286415.1	EMBL	CDS	3800224	3800472	.	-	0	ID=cds3339;Parent=gene3438;Dbxref=EnsemblGenomes-Gn:YE3489,EnsemblGenomes-Tr:CAL13509,InterPro:IPR021676,UniProtKB/TrEMBL:A1JQ13,NCBI_GP:CAL13509.1;Name=CAL13509.1;Note=no significant database hits;gbkey=CDS;product=putative membrane protein;protein_id=CAL13509.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3800326	3800394	.	-	.	ID=id6118;Note=2 probable transmembrane helices predicted for YE3489 by TMHMM2.0 at aa 27-49 and 64-81;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3800230	3800283	.	-	.	ID=id6118;Note=2 probable transmembrane helices predicted for YE3489 by TMHMM2.0 at aa 27-49 and 64-81;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	3800469	3800777	.	-	.	ID=gene3439;Name=YE3490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3490
AM286415.1	EMBL	CDS	3800469	3800777	.	-	0	ID=cds3340;Parent=gene3439;Dbxref=EnsemblGenomes-Gn:YE3490,EnsemblGenomes-Tr:CAL13510,InterPro:IPR019110,UniProtKB/TrEMBL:A1JQ14,NCBI_GP:CAL13510.1;Name=CAL13510.1;Note=Similar to Salmonella typhi hypothetical protein Sty4564 SWALL:Q8Z1K0 (EMBL:AL627282) (90 aa) fasta scores: E(): 5.2e-16%2C 60.46 38d in 86 aa and to Pseudomonas putida putative transmembrane protein SWALL:Q8VMI7 (EMBL:AJ344068) (123 aa) fasta scores: E(): 3.8e-06%2C35.23 38d in 105 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=putative exported protein;protein_id=CAL13510.1;transl_table=11
AM286415.1	EMBL	gene	3801682	3802434	.	-	.	ID=gene3440;Name=YE3492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3492
AM286415.1	EMBL	CDS	3801682	3802434	.	-	0	ID=cds3341;Parent=gene3440;Dbxref=EnsemblGenomes-Gn:YE3492,EnsemblGenomes-Tr:CAL13511,InterPro:IPR022266,UniProtKB/TrEMBL:A1JQ15,NCBI_GP:CAL13511.1;Name=CAL13511.1;Note=Similar to Salmonella typhi putative membrane protein Sty4563 SWALL:Q8Z1K1 (EMBL:AL627282) (252 aa) fasta scores: E(): 5.3e-51%2C 52.38 38d in 252 aa and to Pseudomonas putida hypothetical 27.8 kDa protein SWALL:Q8VMJ4 (EMBL:AJ344068) (249 aa) fasta scores: E(): 7.1e-32%2C 40.75 38d in 238 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=putative inner membrane protein;protein_id=CAL13511.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3802297	3802365	.	-	.	ID=id6119;Note=3 probable transmembrane helices predicted for YE3492 by TMHMM2.0 at aa 24-46%2C 147-169 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3801928	3801996	.	-	.	ID=id6119;Note=3 probable transmembrane helices predicted for YE3492 by TMHMM2.0 at aa 24-46%2C 147-169 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3801706	3801774	.	-	.	ID=id6119;Note=3 probable transmembrane helices predicted for YE3492 by TMHMM2.0 at aa 24-46%2C 147-169 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3802434	3804554	.	-	.	ID=gene3441;Name=YE3493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3493
AM286415.1	EMBL	CDS	3802434	3804554	.	-	0	ID=cds3342;Parent=gene3441;Dbxref=EnsemblGenomes-Gn:YE3493,EnsemblGenomes-Tr:CAL13512,InterPro:IPR019476,InterPro:IPR022458,InterPro:IPR022503,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ16,NCBI_GP:CAL13512.1;Name=CAL13512.1;Note=Similar to Salmonella typhi hypothetical protein Sty4562 SWALL:Q8Z1K2 (EMBL:AL627282) (696 aa) fasta scores: E(): 2.1e-205%2C 72.19 38d in 694 aa and to Pseudomonas putida hypothetical 80.3 kDa protein SWALL:Q8VMJ3 (EMBL:AJ344068) (718 aa) fasta scores: E(): 2.7e-167%2C 61.37 38d in 699 aa. Also weakly similar to several putative plasmid-related CDS: Proteus vulgaris DNA transfer orf202 SWALL:Q8L280 (EMBL:AP004237) (655 aa) fasta scores: E(): 2.7e-29%2C 26.24 38d in 682 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP004237;product=TraG-family protein;protein_id=CAL13512.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3802503	3804119	.	-	.	ID=id6120;Note=Pfam match to entry PF02534 TRAG%2C TraG/TraD family%2C score -197.5%2C E-value 0.0032;gbkey=misc_feature;inference=protein motif:PFAM:PF02534
AM286415.1	EMBL	sequence_feature	3803955	3803978	.	-	.	ID=id6121;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3804740	3805234	.	-	.	ID=gene3442;Name=YE3494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3494
AM286415.1	EMBL	CDS	3804740	3805234	.	-	0	ID=cds3343;Parent=gene3442;Dbxref=EnsemblGenomes-Gn:YE3494,EnsemblGenomes-Tr:CAL13513,InterPro:IPR021300,UniProtKB/TrEMBL:A1JQ27,NCBI_GP:CAL13513.1;Name=CAL13513.1;Note=Similar to Salmonella typhi hypothetical protein Sty4560 SWALL:Q8Z1K4 (EMBL:AL627282) (166 aa) fasta scores: E(): 2.7e-23%2C 46.42 38d in 168 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=conserved hypothetical protein;protein_id=CAL13513.1;transl_table=11
AM286415.1	EMBL	gene	3805258	3805806	.	-	.	ID=gene3443;Name=YE3494A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3494A
AM286415.1	EMBL	CDS	3805258	3805806	.	-	0	ID=cds3344;Parent=gene3443;Dbxref=EnsemblGenomes-Gn:YE3494A,EnsemblGenomes-Tr:CAL13514,InterPro:IPR008258,InterPro:IPR023346,UniProtKB/TrEMBL:A1JQ28,NCBI_GP:CAL13514.1;Name=CAL13514.1;Note=Similar to Salmonella typhi hypothetical protein Sty4559 SWALL:Q8Z1K5 (EMBL:AL627282) (183 aa) fasta scores: E(): 1.5e-42%2C 58.65 38d in 179 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=conserved hypothetical protein;protein_id=CAL13514.1;transl_table=11
AM286415.1	EMBL	gene	3805875	3806642	.	-	.	ID=gene3444;Name=YE3495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3495
AM286415.1	EMBL	CDS	3805875	3806642	.	-	0	ID=cds3345;Parent=gene3444;Dbxref=EnsemblGenomes-Gn:YE3495,EnsemblGenomes-Tr:CAL13515,InterPro:IPR022293,UniProtKB/TrEMBL:A1JQ29,NCBI_GP:CAL13515.1;Name=CAL13515.1;Note=Similar to Salmonella typhi putative exported protein Sty4558 SWALL:Q8Z1K6 (EMBL:AL627282) (246 aa) fasta scores: E(): 4e-47%2C 51.82 38d in 247 aa and to Xanthomonas axonopodis hypothetical protein Xac2255 xac2255 SWALL:Q8PKC0 (EMBL:AE011862) (254 aa) fasta scores: E(): 3.6e-25%2C 37.75 38d in 241 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=putative membrane protein;protein_id=CAL13515.1;transl_table=11
AM286415.1	EMBL	gene	3806785	3807132	.	-	.	ID=gene3445;Name=YE3495A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3495A
AM286415.1	EMBL	CDS	3806785	3807132	.	-	0	ID=cds3346;Parent=gene3445;Dbxref=EnsemblGenomes-Gn:YE3495A,EnsemblGenomes-Tr:CAL13516,UniProtKB/TrEMBL:A1JQ31,NCBI_GP:CAL13516.1;Name=CAL13516.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL13516.1;transl_table=11
AM286415.1	EMBL	gene	3807111	3807365	.	-	.	ID=gene3446;Name=YE3496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3496
AM286415.1	EMBL	CDS	3807111	3807365	.	-	0	ID=cds3347;Parent=gene3446;Dbxref=EnsemblGenomes-Gn:YE3496,EnsemblGenomes-Tr:CAL13517,UniProtKB/TrEMBL:A1JQ32,NCBI_GP:CAL13517.1;Name=CAL13517.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL13517.1;transl_table=11
AM286415.1	EMBL	gene	3807520	3807876	.	+	.	ID=gene3447;Name=YE3496A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3496A
AM286415.1	EMBL	CDS	3807520	3807876	.	+	0	ID=cds3348;Parent=gene3447;Dbxref=EnsemblGenomes-Gn:YE3496A,EnsemblGenomes-Tr:CAL13518,GOA:A1JQ33,InterPro:IPR001387,InterPro:IPR010982,UniProtKB/TrEMBL:A1JQ33,NCBI_GP:CAL13518.1;Name=CAL13518.1;Note=Similar to several putative transcriptional reguulators including: Serratia sp. 2-68 putative transcriptional regulator SWALL:AAM47490 (EMBL:AF468972) (88 aa) fasta scores: E(): 3e-14%2C 56.84 38d in 95 aa and to Vibrio cholerae transcriptional regulator%2C putative vc0176 SWALL:Q9KVH0 (EMBL:AE004108) (102 aa) fasta scores: E(): 5.2e-08%2C 54.93 38d in 71 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF468972;product=putative DNA-binding protein;protein_id=CAL13518.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3807535	3807708	.	+	.	ID=id6122;Note=Pfam match to entry PF01381 helix-turn-helix domain E-value 2.7e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	gene	3808031	3808951	.	-	.	ID=gene3448;Name=YE3497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3497
AM286415.1	EMBL	CDS	3808031	3808951	.	-	0	ID=cds3349;Parent=gene3448;Dbxref=EnsemblGenomes-Gn:YE3497,EnsemblGenomes-Tr:CAL13519,InterPro:IPR006842,InterPro:IPR010106,UniProtKB/TrEMBL:A1JQ34,NCBI_GP:CAL13519.1;Name=CAL13519.1;Note=Similar to Escherichia coli hypothetical protein YhgA or b3411 SWALL:YHGA_ECOLI (SWALL:P31667) (292 aa) fasta scores: E(): 4.4e-57%2C 54.66 38d in 300 aa%2C Yersinia pestis hypothetical protein Ypo0076 SWALL:Q8ZJL8 (EMBL:AJ414141) (319 aa) fasta scores: E(): 8.7e-83%2C71.56 38d in 306 aa%2C Salmonella typhimurium putative transposase Stm0479 SWALL:Q8ZRA4 (EMBL:AE008718) (311 aa) fasta scores: E(): 1.8e-65%2C 56.27 38d in 311 aa and Escherichia coli hypothetical protein YadD or b0132 SWALL:YADD_ECOLI (SWALL:P31665) (300 aa) fasta scores: E(): 7.4e-54%2C 51.49 38d in 301 aa. Additional copies of this element are represented by YE1921%2C YE1924 and YE1655. There are also two partial sequences represented by YE1656 and YE1925.;gbkey=CDS;inference=similar to sequence:UniProtKB:P31667;product=putative transposase;protein_id=CAL13519.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3808100	3808948	.	-	.	ID=id6123;Note=Pfam match to entry PF04754 putative transposase%2CYhgA-like%2C E-value 2.3e-180;gbkey=misc_feature;inference=protein motif:PFAM:PF04754
AM286415.1	EMBL	sequence_feature	3808980	3819159	.	+	.	ID=id6124;Note=type IV pilus cluster;gbkey=misc_feature
AM286415.1	EMBL	gene	3809045	3810322	.	-	.	ID=gene3449;Name=YE3498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3498
AM286415.1	EMBL	CDS	3809045	3810322	.	-	0	ID=cds3350;Parent=gene3449;Dbxref=EnsemblGenomes-Gn:YE3498,EnsemblGenomes-Tr:CAL13520,InterPro:IPR007001,UniProtKB/TrEMBL:A1JQ36,NCBI_GP:CAL13520.1;Name=CAL13520.1;Note=Similar to Escherichia coli type IV pili shufflon protein b' SWALL:SHU4_ECOLI (SWALL:P09748) (444 aa) fasta scores: E(): 9.3e-29%2C 48.53 38d in 445 aa and to Salmonella typhi PilV or Sty4550 SWALL:O51801 (EMBL:AF000001) (435 aa) fasta scores: E(): 2.5e-71%2C 49 id in 400 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P09748;product=putative type IV pilus protein;protein_id=CAL13520.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3810221	3810289	.	-	.	ID=id6125;Note=1 probable transmembrane helix predicted for YE3498 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3810326	3810994	.	-	.	ID=gene3450;Name=YE3499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3499
AM286415.1	EMBL	CDS	3810326	3810994	.	-	0	ID=cds3351;Parent=gene3450;Dbxref=EnsemblGenomes-Gn:YE3499,EnsemblGenomes-Tr:CAL13521,GOA:A1JQ38,InterPro:IPR000045,UniProtKB/TrEMBL:A1JQ38,NCBI_GP:CAL13521.1;Name=CAL13521.1;Note=Similar to many prepilin-like proteins including: Escherichia coli type 4 prepilin-like proteins leader peptide processing enzyme HofD or HopD or HopO or b3335 SWALL:LEP4_ECOLI (SWALL:P25960) (225 aa) fasta scores: E(): 0.00058%2C 28.07 38d in 228 aa%2C Salmonella typhimurium prepilin peptidase pilU SWALL:O07379 (EMBL:AB027308) (218 aa) fasta scores: E(): 4.7e-14%2C 30.39 38d in 227 aa and to Shigella sonnei prepilin peptidase PilU SWALL:Q9R2J4 (EMBL:AB021078) (218 aa) fasta scores: E(): 4.7e-14%2C30.39 38d in 227 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P25960;product=type IV prepilin peptidase;protein_id=CAL13521.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3810335	3810994	.	-	.	ID=id6126;Note=Pfam match to entry PF01478 Peptidase_C20%2C Type IV leader peptidase family%2C score -106.1%2C E-value 6.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01478
AM286415.1	EMBL	sequence_feature	3810743	3810811	.	-	.	ID=id6127;Note=4 probable transmembrane helices predicted for YE3499 by TMHMM2.0 at aa 2-24%2C 62-84 and 96-118%2C 122-144;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3810641	3810709	.	-	.	ID=id6127;Note=4 probable transmembrane helices predicted for YE3499 by TMHMM2.0 at aa 2-24%2C 62-84 and 96-118%2C 122-144;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3810563	3810631	.	-	.	ID=id6127;Note=4 probable transmembrane helices predicted for YE3499 by TMHMM2.0 at aa 2-24%2C 62-84 and 96-118%2C 122-144;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3810458	3810526	.	-	.	ID=id6127;Note=4 probable transmembrane helices predicted for YE3499 by TMHMM2.0 at aa 2-24%2C 62-84 and 96-118%2C 122-144;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	3810991	3811578	.	-	.	ID=gene3451;Name=YE3500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3500
AM286415.1	EMBL	CDS	3810991	3811578	.	-	0	ID=cds3352;Parent=gene3451;Dbxref=EnsemblGenomes-Gn:YE3500,EnsemblGenomes-Tr:CAL13522,InterPro:IPR014911,UniProtKB/TrEMBL:A1JQ39,NCBI_GP:CAL13522.1;Name=CAL13522.1;Note=Similar to Escherichia coli type IV prepilin PilS SWALL:O88170 (EMBL:AB007463) (204 aa) fasta scores: E(): 1.1e-37%2C 56.61 38d in 189 aa and to Salmonella typhimurium type IV prepilin PilS SWALL:O07377 (EMBL:AB027308) (204 aa) fasta scores: E(): 2e-37%2C 56.08 38d in 189 aa;gbkey=CDS;inference=similar to sequence:INSDC:AB027308;product=putative type IV prepilin;protein_id=CAL13522.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3811453	3811521	.	-	.	ID=id6128;Note=1 probable transmembrane helix predicted for YE3500 by TMHMM2.0 at aa 20-42;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3811593	3812702	.	-	.	ID=gene3452;Name=YE3501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3501
AM286415.1	EMBL	CDS	3811593	3812702	.	-	0	ID=cds3353;Parent=gene3452;Dbxref=EnsemblGenomes-Gn:YE3501,EnsemblGenomes-Tr:CAL13523,InterPro:IPR018076,UniProtKB/TrEMBL:A1JQ41,NCBI_GP:CAL13523.1;Name=CAL13523.1;Note=Similar to Escherichia coli%2C and Salmonella typhimurium integral membrane protein PilR SWALL:O07376 (EMBL:AB021078) (365 aa) fasta scores: E(): 3.8e-71%2C50.82 38d in 364 aa%2C and to Escherichia coli PilR SWALL:Q93D63 (EMBL:AF399919) (365 aa) fasta scores: E(): 9.9e-30%2C 31.59 38d in 345 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF399919;product=type IV pilus integral membrane protein;protein_id=CAL13523.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3812217	3812285	.	-	.	ID=id6129;Note=3 probable transmembrane helices predicted for YE3501 by TMHMM2.0 at aa 140-162%2C 191-210 and 339-361;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3812073	3812132	.	-	.	ID=id6129;Note=3 probable transmembrane helices predicted for YE3501 by TMHMM2.0 at aa 140-162%2C 191-210 and 339-361;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3811620	3811688	.	-	.	ID=id6129;Note=3 probable transmembrane helices predicted for YE3501 by TMHMM2.0 at aa 140-162%2C 191-210 and 339-361;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	3811632	3812597	.	-	.	ID=id6130;Note=Pfam match to entry PF00482 GSPII_F%2C Bacterial type II secretion system protein F domain%2C score -76.7%2CE-value 1.5e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00482
AM286415.1	EMBL	gene	3812695	3814248	.	-	.	ID=gene3453;Name=YE3502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3502
AM286415.1	EMBL	CDS	3812695	3814248	.	-	0	ID=cds3354;Parent=gene3453;Dbxref=EnsemblGenomes-Gn:YE3502,EnsemblGenomes-Tr:CAL13524,GOA:A1JQ42,InterPro:IPR001482,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ42,NCBI_GP:CAL13524.1;Name=CAL13524.1;Note=Similar to Salmonella dublin nucleotide-binding type IV pili protein PilQ SWALL:Q9KHW5 (EMBL:AF247502) (571 aa) fasta scores: E(): 3.8e-99%2C 55.35 38d in 495 aa%2CSalmonella typhi PilQ or Sty4545 SWALL:Q9LBE1 (EMBL:AF000001) (571 aa) fasta scores: E(): 1.5e-98%2C54.94 38d in 495 aa%2C and to Escherichia coli PilQ protein SWALL:Q9F536 (EMBL:AP002527) (517 aa) fasta scores: E(): 4e-48%2C 41.3 38d in 523 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP002527;product=putative type IV pilus protein;protein_id=CAL13524.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3813112	3814017	.	-	.	ID=id6131;Note=Pfam match to entry PF00437 GSPII_E%2C Type II/IV secretion system protein%2C score 164.4%2C E-value 1.3e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF00437
AM286415.1	EMBL	sequence_feature	3813532	3813555	.	-	.	ID=id6132;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3814257	3814736	.	-	.	ID=gene3454;Name=YE3502A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3502A
AM286415.1	EMBL	CDS	3814257	3814736	.	-	0	ID=cds3355;Parent=gene3454;Dbxref=EnsemblGenomes-Gn:YE3502A,EnsemblGenomes-Tr:CAL13525,InterPro:IPR022753,UniProtKB/TrEMBL:A1JQ43,NCBI_GP:CAL13525.1;Name=CAL13525.1;Note=Similar to Yersinia pseudotuberculosis PilP SWALL:AAL05420 (EMBL:AY047316) (164 aa) fasta scores: E(): 4.3e-34%2C 67.68 38d in 164 aa%2C Salmonella typhi%2C and Salmonella dublin PilP or Sty4544 SWALL:Q9RHF2 (EMBL:AF000001) (156 aa) fasta scores: E(): 1.6e-10%2C38.31 38d in 154 aa and to Escherichia coli PilP protein SWALL:Q9F535 (EMBL:AP002527) (171 aa) fasta scores: E(): 5.4e-05%2C 28.46 38d in 137 aa;gbkey=CDS;inference=similar to sequence:INSDC:AY047316;product=putative type IV pilus protein;protein_id=CAL13525.1;transl_table=11
AM286415.1	EMBL	gene	3814723	3816030	.	-	.	ID=gene3455;Name=YE3503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3503
AM286415.1	EMBL	CDS	3814723	3816030	.	-	0	ID=cds3356;Parent=gene3455;Dbxref=EnsemblGenomes-Gn:YE3503,EnsemblGenomes-Tr:CAL13526,InterPro:IPR009663,UniProtKB/TrEMBL:A1JQ44,NCBI_GP:CAL13526.1;Name=CAL13526.1;Note=Similar to Salmonella dublin%2C and Salmonella typhi PilO SWALL:Q9K2P9 (EMBL:AF247502) (428 aa) fasta scores: E(): 1.8e-39%2C 33.41 38d in 428 aa%2C and to Escherichia coli PilO protein SWALL:Q9F534 (EMBL:AP002527) (440 aa) fasta scores: E(): 4.7e-14%2C 22.97 38d in 431 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP002527;product=putative type IV pilus protein;protein_id=CAL13526.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3815428	3815496	.	-	.	ID=id6133;Note=1 probable transmembrane helix predicted for YE3503 by TMHMM2.0 at aa 179-201;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3816033	3817721	.	-	.	ID=gene3456;Name=YE3504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3504
AM286415.1	EMBL	CDS	3816033	3817721	.	-	0	ID=cds3357;Parent=gene3456;Dbxref=EnsemblGenomes-Gn:YE3504,EnsemblGenomes-Tr:CAL13527,GOA:A1JQ45,InterPro:IPR004846,InterPro:IPR011514,InterPro:IPR013359,UniProtKB/TrEMBL:A1JQ45,NCBI_GP:CAL13527.1;Name=CAL13527.1;Note=Similar to Escherichia coli%2C and Salmonella typhimurium lipoprotein PilN SWALL:O07372 (EMBL:AB021078) (560 aa) fasta scores: E(): 4.1e-93%2C 49.81 38d in 550 aa.;gbkey=CDS;inference=similar to sequence:INSDC:AB021078;product=putative type IV pilus operon lipoprotein;protein_id=CAL13527.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3816036	3816875	.	-	.	ID=id6134;Note=Pfam match to entry PF00263 GSPII_III%2C Bacterial type II and III secretion system protein%2C score 52.9%2CE-value 4.6e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00263
AM286415.1	EMBL	sequence_feature	3817647	3817679	.	-	.	ID=id6135;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3817733	3818170	.	-	.	ID=gene3457;Name=YE3505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3505
AM286415.1	EMBL	CDS	3817733	3818170	.	-	0	ID=cds3358;Parent=gene3457;Dbxref=EnsemblGenomes-Gn:YE3505,EnsemblGenomes-Tr:CAL13528,InterPro:IPR009987,UniProtKB/TrEMBL:A1JQ47,NCBI_GP:CAL13528.1;Name=CAL13528.1;Note=Similar to Escherichia coli%2C and Salmonella typhimurium PilM protein SWALL:O07371 (EMBL:AB021078) (145 aa) fasta scores: E(): 6e-14%2C 33.56 38d in 146 aa and to Salmonella dublin PilM SWALL:Q9KHW6 (EMBL:AF247502) (139 aa) fasta scores: E(): 5.5e-12%2C 37.6 38d in 125 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF247502;product=putative type IV pilus operon exported poprotein;protein_id=CAL13528.1;transl_table=11
AM286415.1	EMBL	gene	3818172	3819146	.	-	.	ID=gene3458;Name=YE3506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3506
AM286415.1	EMBL	CDS	3818172	3819146	.	-	0	ID=cds3359;Parent=gene3458;Dbxref=EnsemblGenomes-Gn:YE3506,EnsemblGenomes-Tr:CAL13529,InterPro:IPR018927,InterPro:IPR022260,UniProtKB/TrEMBL:A1JQ48,NCBI_GP:CAL13529.1;Name=CAL13529.1;Note=Similar to Salmonella dublin%2C and Salmonella typhi PilL SWALL:Q9K334 (EMBL:AF247502) (414 aa) fasta scores: E(): 7e-34%2C 44.33 38d in 406 aa and to Shigella sonnei lipoprotein PilL SWALL:Q9R2J1 (EMBL:AB021078) (355 aa) fasta scores: E(): 9.2e-19%2C 33.12 38d in 320 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF247502;product=putative type IV pilus operon lipoprotein;protein_id=CAL13529.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3819075	3819107	.	-	.	ID=id6136;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3819341	3819772	.	-	.	ID=gene3459;Name=YE3507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3507
AM286415.1	EMBL	CDS	3819341	3819772	.	-	0	ID=cds3360;Parent=gene3459;Dbxref=EnsemblGenomes-Gn:YE3507,EnsemblGenomes-Tr:CAL13530,InterPro:IPR002636,UniProtKB/TrEMBL:A1JQ50,NCBI_GP:CAL13530.1;Name=CAL13530.1;Note=Similar to several proteins of undefined function including: Ralstonia solanacearum SWALL:O82963 (EMBL:AB015669) (143 aa) fasta scores: E(): 5.4e-22%2C43.44 38d in 145 aa%2C and to Synechocystis sp. hypothetical protein Sll1692 SWALL:P73707 (EMBL:D90908) (145 aa) fasta scores: E(): 9.2e-20%2C 44.44 38d in 135 aa;gbkey=CDS;inference=similar to sequence:INSDC:D90908;product=conserved hypothetical protein;protein_id=CAL13530.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3819347	3819772	.	-	.	ID=id6137;Note=Pfam match to entry PF01724 DUF29%2C Domain of unknown function DUF29%2C score 197.7%2C E-value 1.2e-56;gbkey=misc_feature;inference=protein motif:PFAM:PF01724
AM286415.1	EMBL	gene	3819884	3820201	.	-	.	ID=gene3460;Name=YE3508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3508
AM286415.1	EMBL	CDS	3819884	3820201	.	-	0	ID=cds3361;Parent=gene3460;Dbxref=EnsemblGenomes-Gn:YE3508,EnsemblGenomes-Tr:CAL13531,InterPro:IPR018841,UniProtKB/TrEMBL:A1JQ51,NCBI_GP:CAL13531.1;Name=CAL13531.1;Note=no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL13531.1;transl_table=11
AM286415.1	EMBL	gene	3820501	3821043	.	-	.	ID=gene3461;Name=YE3509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3509
AM286415.1	EMBL	CDS	3820501	3821043	.	-	0	ID=cds3362;Parent=gene3461;Dbxref=EnsemblGenomes-Gn:YE3509,EnsemblGenomes-Tr:CAL13532,InterPro:IPR021960,UniProtKB/TrEMBL:A1JQ52,NCBI_GP:CAL13532.1;Name=CAL13532.1;Note=Similar in parts to Salmonella typhi hypothetical protein Sty4534 SWALL:Q8Z1L5 (EMBL:AL627282) (149 aa) fasta scores: E(): 1.2e-35%2C 62.23 38d in 143 aa and to Xylella fastidiosa hypothetical protein Xf1761 SWALL:Q9PCL7 (EMBL:AE003998) (375 aa) fasta scores: E(): 2.1e-10%2C 34.78 38d in 138 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=hypothetical protein;protein_id=CAL13532.1;transl_table=11
AM286415.1	EMBL	gene	3821333	3822091	.	-	.	ID=gene3462;Name=YE3510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3510
AM286415.1	EMBL	CDS	3821333	3822091	.	-	0	ID=cds3363;Parent=gene3462;Dbxref=EnsemblGenomes-Gn:YE3510,EnsemblGenomes-Tr:CAL13533,InterPro:IPR014996,UniProtKB/TrEMBL:A1JQ53,NCBI_GP:CAL13533.1;Name=CAL13533.1;Note=Similar to Salmonella typhi hypothetical protein Sty4529 SWALL:Q8Z1L6 (EMBL:AL627282) (259 aa) fasta scores: E(): 6.8e-36%2C 46.38 38d in 235 aa and to Xylella fastidiosa hypothetical protein Xf1780 SWALL:Q9PCJ9 (EMBL:AE004000) (249 aa) fasta scores: E(): 5.1e-10%2C30.55 38d in 216 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=conserved hypothetical protein;protein_id=CAL13533.1;transl_table=11
AM286415.1	EMBL	gene	3822260	3823462	.	-	.	ID=gene3463;Name=YE3511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3511
AM286415.1	EMBL	CDS	3822260	3823462	.	-	0	ID=cds3364;Parent=gene3463;Dbxref=EnsemblGenomes-Gn:YE3511,EnsemblGenomes-Tr:CAL13534,UniProtKB/TrEMBL:A1JQ54,NCBI_GP:CAL13534.1;Name=CAL13534.1;Note=Similar in parts to Salmonella typhi hypothetical protein Sty4528 SWALL:Q8Z1L7 (EMBL:AL627282) (447 aa) fasta scores: E(): 1.5e-49%2C 46.48 38d in 398 aa and to Xylella fastidiosa hypothetical protein Xf1781 SWALL:Q9PCJ8 (EMBL:AE004000) (418 aa) fasta scores: E(): 2e-26%2C 31.94 38d in 360 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=conserved hypothetical protein;protein_id=CAL13534.1;transl_table=11
AM286415.1	EMBL	gene	3823568	3824137	.	-	.	ID=gene3464;Name=YE3512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3512
AM286415.1	EMBL	CDS	3823568	3824137	.	-	0	ID=cds3365;Parent=gene3464;Dbxref=EnsemblGenomes-Gn:YE3512,EnsemblGenomes-Tr:CAL13535,InterPro:IPR021364,UniProtKB/TrEMBL:A1JQ55,NCBI_GP:CAL13535.1;Name=CAL13535.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13535.1;transl_table=11
AM286415.1	EMBL	gene	3824134	3825720	.	-	.	ID=gene3465;Name=YE3513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3513
AM286415.1	EMBL	CDS	3824134	3825720	.	-	0	ID=cds3366;Parent=gene3465;Dbxref=EnsemblGenomes-Gn:YE3513,EnsemblGenomes-Tr:CAL13536,InterPro:IPR003115,InterPro:IPR022304,UniProtKB/TrEMBL:A1JQ56,NCBI_GP:CAL13536.1;Name=CAL13536.1;Note=Similar to Salmonella typhi hypothetical protein Sty4523 SWALL:Q8Z1M1 (EMBL:AL627282) (599 aa) fasta scores: E(): 7.5e-68%2C 45.22 38d in 597 aa and to Xylella fastidiosa hypothetical protein Xf1784 SWALL:Q9PCJ5 (EMBL:AE004000) (253 aa) fasta scores: E(): 9.3e-32%2C45.77 38d in 225 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=putative ATP/GTP binding protein;protein_id=CAL13536.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3825499	3825606	.	-	.	ID=id6138;Note=Pfam match to entry PF02195 ParBc%2C ParB-like nuclease domain%2C score 25.3%2C E-value 1.3e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF02195
AM286415.1	EMBL	sequence_feature	3825664	3825687	.	-	.	ID=id6139;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3825720	3827087	.	-	.	ID=gene3466;Name=dnaB2;gbkey=Gene;gene=dnaB2;gene_biotype=protein_coding;locus_tag=YE3514
AM286415.1	EMBL	CDS	3825720	3827087	.	-	0	ID=cds3367;Parent=gene3466;Dbxref=EnsemblGenomes-Gn:YE3514,EnsemblGenomes-Tr:CAL13537,GOA:A1JQ58,InterPro:IPR007692,InterPro:IPR007693,InterPro:IPR007694,InterPro:IPR016136,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ58,NCBI_GP:CAL13537.1;Name=CAL13537.1;Note=Similar to Escherichia coli replicative DNA helicase DnaB or GroP or GrpA or b4052 SWALL:DNAB_ECOLI (SWALL:P03005) (471 aa) fasta scores: E(): 2.7e-83%2C 53.44 id in 436 aa%2C Salmonella typhi DNA helicase Sty4522 SWALL:Q8Z1M2 (EMBL:AL627282) (454 aa) fasta scores: E(): 9.6e-92%2C 54.6 38d in 445 aa and to Salmonella typhimurium%2Cand Salmonella typhi replicative DNA helicase DnaB or Stm4246 or sty4442 SWALL:DNAB_SALTY (SWALL:P10338) (471 aa) fasta scores: E(): 4.9e-83%2C 53.65 38d in 438 aa;gbkey=CDS;gene=dnaB2;inference=similar to sequence:UniProtKB:P10338;product=putative DNA helicase;protein_id=CAL13537.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3825936	3826541	.	-	.	ID=id6140;Note=Pfam match to entry PF03796 DnaB_C%2C DnaB-like helicase C terminal domain%2C score 291.8%2C E-value 5.7e-85;gbkey=misc_feature;gene=dnaB2;inference=protein motif:PFAM:PF03796
AM286415.1	EMBL	sequence_feature	3826434	3826457	.	-	.	ID=id6141;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=dnaB2;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3826752	3827063	.	-	.	ID=id6142;Note=Pfam match to entry PF00772 DnaB%2C DnaB-like helicase N terminal domain%2C score 144.0%2C E-value 1.8e-40;gbkey=misc_feature;gene=dnaB2;inference=protein motif:PFAM:PF00772
AM286415.1	EMBL	gene	3827080	3827961	.	-	.	ID=gene3467;Name=YE3515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3515
AM286415.1	EMBL	CDS	3827080	3827961	.	-	0	ID=cds3368;Parent=gene3467;Dbxref=EnsemblGenomes-Gn:YE3515,EnsemblGenomes-Tr:CAL13538,InterPro:IPR002586,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ59,NCBI_GP:CAL13538.1;Name=CAL13538.1;Note=Similar to Xylella fastidiosa chromosome partitioning related protein Xf1785 SWALL:Q9PCJ4 (EMBL:AE004000) (291 aa) fasta scores: E(): 2.2e-29%2C42.04 38d in 283 aa and in part to Salmonella typhi hypothetical protein Sty4521 SWALL:Q8Z1M3 (EMBL:AL627282) (344 aa) fasta scores: E(): 2.6e-67%2C 59.45 38d in 291 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=conserved hypothetical protein;protein_id=CAL13538.1;transl_table=11
AM286415.1	EMBL	tRNA	3828040	3828092	.	-	.	ID=rna130;Note=duplicated fragment of tRNA-phe thought to be associated with insertion of YAPI pathogenicity island;gbkey=tRNA;product=tRNA-Phe
AM286415.1	EMBL	exon	3828040	3828092	.	-	.	ID=id6143;Parent=rna130;Note=duplicated fragment of tRNA-phe thought to be associated with insertion of YAPI pathogenicity island;gbkey=tRNA;product=tRNA-Phe
AM286415.1	EMBL	pseudogene	3828311	3829272	.	-	.	ID=gene3468;Name=YE3516;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE3516;pseudo=true
AM286415.1	EMBL	CDS	3828946	3829272	.	-	0	ID=cds3369;Parent=gene3468;Dbxref=PSEUDO:CAL13539.1;Note=Similar to Salmonella typhi probable phage integrase Sty4666 SWALL:Q8Z1C4 (EMBL:AL627283) (337 aa) fasta scores: E(): 5.5e-60%2C 47.84 38d in 324 aa and to Bacillus subtilis probable integrase/recombinase RipX SWALL:RIPX_BACSU (SWALL:P46352) (296 aa) fasta scores: E(): 0.00072%2C 22.65 38d in 309 aa. Note that this CDS contains a frameshift mutation following codon 109. Interestingly the framshift closely follows a poly A homopolymeric tract that could be a site for programed ribosomal frameshifting.;gbkey=CDS;inference=similar to sequence:UniProtKB:P46352;product=putative integrase (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3828311	3828946	.	-	0	ID=cds3369;Parent=gene3468;Dbxref=PSEUDO:CAL13539.1;Note=Similar to Salmonella typhi probable phage integrase Sty4666 SWALL:Q8Z1C4 (EMBL:AL627283) (337 aa) fasta scores: E(): 5.5e-60%2C 47.84 38d in 324 aa and to Bacillus subtilis probable integrase/recombinase RipX SWALL:RIPX_BACSU (SWALL:P46352) (296 aa) fasta scores: E(): 0.00072%2C 22.65 38d in 309 aa. Note that this CDS contains a frameshift mutation following codon 109. Interestingly the framshift closely follows a poly A homopolymeric tract that could be a site for programed ribosomal frameshifting.;gbkey=CDS;inference=similar to sequence:UniProtKB:P46352;product=putative integrase (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	3828335	3828895	.	-	.	ID=id6144;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 61.7%2C E-value 1e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	sequence_feature	3829012	3829263	.	-	.	ID=id6145;Note=Pfam match to entry PF02899 Phage_integr_N%2C Phage integrase%2C N-terminal SAM-like domain%2C score 7.9%2C E-value 0.0066;gbkey=misc_feature;inference=protein motif:PFAM:PF02899
AM286415.1	EMBL	gene	3829378	3829686	.	-	.	ID=gene3469;Name=YE3518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3518
AM286415.1	EMBL	CDS	3829378	3829686	.	-	0	ID=cds3370;Parent=gene3469;Dbxref=EnsemblGenomes-Gn:YE3518,EnsemblGenomes-Tr:CAL13540,UniProtKB/TrEMBL:A1JQ62,NCBI_GP:CAL13540.1;Name=CAL13540.1;Note=no significant database hits;gbkey=CDS;product=putative exported protein;protein_id=CAL13540.1;transl_table=11
AM286415.1	EMBL	gene	3829958	3830125	.	+	.	ID=gene3470;Name=YE3519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3519
AM286415.1	EMBL	CDS	3829958	3830125	.	+	0	ID=cds3371;Parent=gene3470;Dbxref=EnsemblGenomes-Gn:YE3519,EnsemblGenomes-Tr:CAL13541,UniProtKB/TrEMBL:A1JQ63,NCBI_GP:CAL13541.1;Name=CAL13541.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL13541.1;transl_table=11
AM286415.1	EMBL	gene	3830294	3831526	.	-	.	ID=gene3471;Name=YE3520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3520
AM286415.1	EMBL	CDS	3830294	3831526	.	-	0	ID=cds3372;Parent=gene3471;Dbxref=EnsemblGenomes-Gn:YE3520,EnsemblGenomes-Tr:CAL13542,InterPro:IPR011093,InterPro:IPR011119,InterPro:IPR022391,UniProtKB/TrEMBL:A1JQ64,NCBI_GP:CAL13542.1;Name=CAL13542.1;Note=Similar to Salmonella typhi hypothetical protein Sty4665 SWALL:Q8Z1C5 (EMBL:AL627283) (529 aa) fasta scores: E(): 1.7e-29%2C 27.18 38d in 526 aa and to Xylella fastidiosa hypothetical protein Xf1753 SWALL:Q9PCM5 (EMBL:AE003998) (616 aa) fasta scores: E(): 3.3e-26%2C36.23 38d in 218 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627283;product=conserved hypothetical protein;protein_id=CAL13542.1;transl_table=11
AM286415.1	EMBL	pseudogene	3833522	3833827	.	-	.	ID=gene3472;Name=YE3521;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3521;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	3832233	3833516	.	-	.	ID=gene3472;Name=YE3521;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3521;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	3833522	3833827	.	-	0	ID=cds3373;Parent=gene3472;Note=Highly similar to the C-terminal region of both Xanthomonas axonopodis hypothetical protein Xac2274 SWALL:Q8PKA1 (EMBL:AE011864) (897 aa) fasta scores: E(): 8.5e-117%2C 59.28 38d in 533 aa and to Salmonella typhi hypothetical protein Sty4573 SWALL:Q8Z1J2 (EMBL:AL627282) (807 aa) fasta scores: E(): 4.5e-75%2C 64.52 38d in 544 aa. The product of this CDS also displays significant sequence identity with the plasmid DNA-transfer genes of Vibrio cholerae sex pilus assembly TraC SWALL:AAL59681 (EMBL:AY055428) (799 aa) fasta scores: E(): 0.36%2C 22.95 id in 501 aa and to Providencia rettgeri TraC SWALL:Q8RKZ1 (EMBL:AY090559) (799 aa) fasta scores: E(): 0.36%2C 23.15 id in 501 aa. Note this CDS pppears to lack the N-terminal 360 aa. This CDS also carries a framshift mutation following codon 102. Also highly similar to the upstream CDS YE3482.;gbkey=CDS;inference=similar to sequence:INSDC:AY090559;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3832233	3833516	.	-	0	ID=cds3373;Parent=gene3472;Note=Highly similar to the C-terminal region of both Xanthomonas axonopodis hypothetical protein Xac2274 SWALL:Q8PKA1 (EMBL:AE011864) (897 aa) fasta scores: E(): 8.5e-117%2C 59.28 38d in 533 aa and to Salmonella typhi hypothetical protein Sty4573 SWALL:Q8Z1J2 (EMBL:AL627282) (807 aa) fasta scores: E(): 4.5e-75%2C 64.52 38d in 544 aa. The product of this CDS also displays significant sequence identity with the plasmid DNA-transfer genes of Vibrio cholerae sex pilus assembly TraC SWALL:AAL59681 (EMBL:AY055428) (799 aa) fasta scores: E(): 0.36%2C 22.95 id in 501 aa and to Providencia rettgeri TraC SWALL:Q8RKZ1 (EMBL:AY090559) (799 aa) fasta scores: E(): 0.36%2C 23.15 id in 501 aa. Note this CDS pppears to lack the N-terminal 360 aa. This CDS also carries a framshift mutation following codon 102. Also highly similar to the upstream CDS YE3482.;gbkey=CDS;inference=similar to sequence:INSDC:AY090559;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	3833460	3833483	.	-	.	ID=id6146;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	pseudogene	3833849	3835166	.	-	.	ID=gene3473;Name=YE3522;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE3522;pseudo=true
AM286415.1	EMBL	CDS	3834855	3835166	.	-	0	ID=cds3374;Parent=gene3473;Note=Similar to Salmonella typhi putative exported protein Sty4570 SWALL:Q8Z1J5 (EMBL:AL627282) (492 aa) fasta scores: E(): 3.1e-68%2C 53.37 38d in 459 aa and to Xanthomonas axonopodis hypothetical protein Xac2273 SWALL:Q8PKA2 (EMBL:AE011864) (490 aa) fasta scores: E(): 5.7e-39%2C 44.1 38d in 458 aa. Contains a stop after codon 117. Also highly similar to the upstream CDS 3484;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=Putative exported protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3833849	3834827	.	-	0	ID=cds3374;Parent=gene3473;Note=Similar to Salmonella typhi putative exported protein Sty4570 SWALL:Q8Z1J5 (EMBL:AL627282) (492 aa) fasta scores: E(): 3.1e-68%2C 53.37 38d in 459 aa and to Xanthomonas axonopodis hypothetical protein Xac2273 SWALL:Q8PKA2 (EMBL:AE011864) (490 aa) fasta scores: E(): 5.7e-39%2C 44.1 38d in 458 aa. Contains a stop after codon 117. Also highly similar to the upstream CDS 3484;gbkey=CDS;inference=similar to sequence:INSDC:AL627282;product=Putative exported protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	pseudogene	3835172	3835978	.	-	.	ID=gene3474;Name=YE3524;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE3524;pseudo=true
AM286415.1	EMBL	CDS	3835172	3835978	.	-	0	ID=cds3375;Parent=gene3474;Note=Similar to Streptomyces coelicolor putative transposase sco6392 or sc3c8.11C SWALL:O69923 (EMBL:AL023861) (379 aa) fasta scores: E(): 2.7e-20%2C36.07 38d in 255 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL023861;product=putative transposase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	pseudogene	3836065	3836292	.	+	.	ID=gene3475;Name=YE3524A;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE3524A;pseudo=true
AM286415.1	EMBL	CDS	3836065	3836292	.	+	0	ID=cds3376;Parent=gene3475;gbkey=CDS;product=hypothetical protein (remnant);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	3836292	3836549	.	+	.	ID=gene3476;Name=YE3525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3525
AM286415.1	EMBL	CDS	3836292	3836549	.	+	0	ID=cds3377;Parent=gene3476;Dbxref=EnsemblGenomes-Gn:YE3525,EnsemblGenomes-Tr:CAL13547,GOA:A1JQ65,InterPro:IPR001584,InterPro:IPR012337,UniProtKB/TrEMBL:A1JQ65,NCBI_GP:CAL13547.1;Name=CAL13547.1;Note=Similar to Pantoea agglomerans putative transposase b SWALL:Q9AM89 (EMBL:AF327445) (279 aa) fasta scores: E(): 1.6e-19%2C 61.17 38d in 85 aa%2C and to Pseudomonas syringae pv.eriobotryae psvA gene and 3 orfs SWALL:Q9R9F1 (EMBL:AB018553) (160 aa) fasta scores: E(): 1.7e-17%2C 60 id in 80 aa%3B contains Pfam Integrase core domain;gbkey=CDS;inference=similar to sequence:INSDC:AF327445;product=Hypothetical protein;protein_id=CAL13547.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3836301	3836519	.	+	.	ID=id6147;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 53.3%2C E-value 2.3e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	3836661	3837980	.	-	.	ID=gene3477;Name=potE2;gbkey=Gene;gene=potE2;gene_biotype=protein_coding;locus_tag=YE3526
AM286415.1	EMBL	CDS	3836661	3837980	.	-	0	ID=cds3378;Parent=gene3477;Dbxref=EnsemblGenomes-Gn:YE3526,EnsemblGenomes-Tr:CAL13548,GOA:A1JQ67,InterPro:IPR002293,InterPro:IPR004754,InterPro:IPR027566,UniProtKB/TrEMBL:A1JQ67,NCBI_GP:CAL13548.1;Name=CAL13548.1;Note=Similar to Escherichia coli putrescine-ornithine antiporter potE or b0692 SWALL:POTE_ECOLI (SWALL:P24170) (439 aa) fasta scores: E(): 1.3e-146%2C 86.72 38d in 437 aa;gbkey=CDS;gene=potE2;inference=similar to sequence:UniProtKB:P24170;product=putrescine-ornithine antiporter;protein_id=CAL13548.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3837888	3837956	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3837804	3837872	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3837651	3837719	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3837555	3837623	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3837462	3837521	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3837363	3837419	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3837234	3837302	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3837108	3837176	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3836955	3837008	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3836859	3836927	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3836766	3836822	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3836694	3836753	.	-	.	ID=id6148;Note=12 probable transmembrane helices predicted for YE3526 by TMHMM2.0 at aa 9-31%2C 37-59%2C 88-110%2C 120-142%2C154-173%2C 188-206%2C 227-249%2C 269-291%2C 325-342%2C 352-374%2C387-405 and 410-429;gbkey=misc_feature;gene=potE2;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3836700	3837923	.	-	.	ID=id6149;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -202.9%2C E-value 6e-05;gbkey=misc_feature;gene=potE2;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	3837732	3837755	.	-	.	ID=id6150;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=potE2;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3838102	3840264	.	-	.	ID=gene3478;Name=speF2;gbkey=Gene;gene=speF2;gene_biotype=protein_coding;locus_tag=YE3527
AM286415.1	EMBL	CDS	3838102	3840264	.	-	0	ID=cds3379;Parent=gene3478;Dbxref=EnsemblGenomes-Gn:YE3527,EnsemblGenomes-Tr:CAL13549,GOA:A1JQ68,InterPro:IPR000310,InterPro:IPR005308,InterPro:IPR008286,InterPro:IPR011006,InterPro:IPR011193,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR027464,InterPro:IPR027568,UniProtKB/TrEMBL:A1JQ68,NCBI_GP:CAL13549.1;Name=CAL13549.1;Note=Similar to Escherichia coli ornithine decarboxylase%2C inducible speF or b0693 SWALL:DCOS_ECOLI (SWALL:P24169) (732 aa) fasta scores: E(): 0%2C 75.97 38d in 720 aa%2C and to Salmonella typhimurium ornithine decarboxylase isozyme%2C inducible speF or stm0701 SWALL:Q8ZQW6 (EMBL:AE008728) (732 aa) fasta scores: E(): 0%2C 76.94 38d in 720 aa;gbkey=CDS;gene=speF2;inference=similar to sequence:UniProtKB:P24169;product=ornithine decarboxylase%2C inducible;protein_id=CAL13549.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3838138	3838539	.	-	.	ID=id6151;Note=Pfam match to entry PF03711 OKR_DC_1_C%2C Orn/Lys/Arg decarboxylase%2C C-terminal domain%2C score 271.7%2C E-value 6.2e-79;gbkey=misc_feature;gene=speF2;inference=protein motif:PFAM:PF03711
AM286415.1	EMBL	sequence_feature	3838561	3839940	.	-	.	ID=id6152;Note=Pfam match to entry PF01276 OKR_DC_1%2C Orn/Lys/Arg decarboxylase%2C major domain%2C score 992.6%2C E-value 6.1e-296;gbkey=misc_feature;gene=speF2;inference=protein motif:PFAM:PF01276
AM286415.1	EMBL	sequence_feature	3839173	3839217	.	-	.	ID=id6153;Note=PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site.;gbkey=misc_feature;gene=speF2;inference=protein motif:Prosite:PS00703
AM286415.1	EMBL	sequence_feature	3839860	3839901	.	-	.	ID=id6154;Note=PS00196 Type-1 copper (blue) proteins signature.;gbkey=misc_feature;gene=speF2;inference=protein motif:Prosite:PS00196
AM286415.1	EMBL	sequence_feature	3839956	3840264	.	-	.	ID=id6155;Note=Pfam match to entry PF03709 OKR_DC_1_N%2C Orn/Lys/Arg decarboxylase%2C N-terminal domain%2C score 99.4%2C E-value 4.5e-27;gbkey=misc_feature;gene=speF2;inference=protein motif:PFAM:PF03709
AM286415.1	EMBL	sequence_feature	3840072	3845418	.	-	.	ID=id6156;Note=in Yp and Ypstb;gbkey=misc_feature
AM286415.1	EMBL	gene	3841009	3842349	.	-	.	ID=gene3479;Name=YE3528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3528
AM286415.1	EMBL	CDS	3841009	3842349	.	-	0	ID=cds3380;Parent=gene3479;Dbxref=EnsemblGenomes-Gn:YE3528,EnsemblGenomes-Tr:CAL13550,GOA:A1JQ69,InterPro:IPR003423,InterPro:IPR028351,UniProtKB/TrEMBL:A1JQ69,NCBI_GP:CAL13550.1;Name=CAL13550.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13550.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3841018	3841623	.	-	.	ID=id6157;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 87.5%2C E-value 1.7e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	sequence_feature	3841669	3842280	.	-	.	ID=id6158;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 89.2%2C E-value 5.4e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	gene	3842531	3844303	.	-	.	ID=gene3480;Name=YE3529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3529
AM286415.1	EMBL	CDS	3842531	3844303	.	-	0	ID=cds3381;Parent=gene3480;Dbxref=EnsemblGenomes-Gn:YE3529,EnsemblGenomes-Tr:CAL13551,GOA:A1JQ70,InterPro:IPR006726,UniProtKB/TrEMBL:A1JQ70,NCBI_GP:CAL13551.1;Name=CAL13551.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13551.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3844154	3844222	.	-	.	ID=id6159;Note=8 probable transmembrane helices predicted for YE3529 by TMHMM2.0 at aa 28-50%2C 54-73%2C 80-99%2C 109-131%2C341-363%2C 369-386%2C 393-415 and 425-447;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3844085	3844144	.	-	.	ID=id6159;Note=8 probable transmembrane helices predicted for YE3529 by TMHMM2.0 at aa 28-50%2C 54-73%2C 80-99%2C 109-131%2C341-363%2C 369-386%2C 393-415 and 425-447;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3844007	3844066	.	-	.	ID=id6159;Note=8 probable transmembrane helices predicted for YE3529 by TMHMM2.0 at aa 28-50%2C 54-73%2C 80-99%2C 109-131%2C341-363%2C 369-386%2C 393-415 and 425-447;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3843911	3843979	.	-	.	ID=id6159;Note=8 probable transmembrane helices predicted for YE3529 by TMHMM2.0 at aa 28-50%2C 54-73%2C 80-99%2C 109-131%2C341-363%2C 369-386%2C 393-415 and 425-447;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3843215	3843283	.	-	.	ID=id6159;Note=8 probable transmembrane helices predicted for YE3529 by TMHMM2.0 at aa 28-50%2C 54-73%2C 80-99%2C 109-131%2C341-363%2C 369-386%2C 393-415 and 425-447;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3843146	3843199	.	-	.	ID=id6159;Note=8 probable transmembrane helices predicted for YE3529 by TMHMM2.0 at aa 28-50%2C 54-73%2C 80-99%2C 109-131%2C341-363%2C 369-386%2C 393-415 and 425-447;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3843059	3843127	.	-	.	ID=id6159;Note=8 probable transmembrane helices predicted for YE3529 by TMHMM2.0 at aa 28-50%2C 54-73%2C 80-99%2C 109-131%2C341-363%2C 369-386%2C 393-415 and 425-447;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3842963	3843031	.	-	.	ID=id6159;Note=8 probable transmembrane helices predicted for YE3529 by TMHMM2.0 at aa 28-50%2C 54-73%2C 80-99%2C 109-131%2C341-363%2C 369-386%2C 393-415 and 425-447;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	3843020	3843049	.	-	.	ID=id6160;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	3844419	3845468	.	-	.	ID=gene3481;Name=YE3530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3530
AM286415.1	EMBL	CDS	3844419	3845468	.	-	0	ID=cds3382;Parent=gene3481;Dbxref=EnsemblGenomes-Gn:YE3530,EnsemblGenomes-Tr:CAL13552,GOA:A1JQ71,InterPro:IPR006143,UniProtKB/TrEMBL:A1JQ71,NCBI_GP:CAL13552.1;Name=CAL13552.1;gbkey=CDS;product=putative HlyD family secretion protein;protein_id=CAL13552.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3844440	3845321	.	-	.	ID=id6161;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 108.0%2C E-value 1.1e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	sequence_feature	3845373	3845432	.	-	.	ID=id6162;Note=1 probable transmembrane helix predicted for YE3530 by TMHMM2.0 at aa 13-32;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3845478	3845804	.	-	.	ID=gene3482;Name=YE3531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3531
AM286415.1	EMBL	CDS	3845478	3845804	.	-	0	ID=cds3383;Parent=gene3482;Dbxref=EnsemblGenomes-Gn:YE3531,EnsemblGenomes-Tr:CAL13553,UniProtKB/TrEMBL:A1JQ79,NCBI_GP:CAL13553.1;Name=CAL13553.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13553.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3845580	3845648	.	-	.	ID=id6163;Note=2 probable transmembrane helices predicted for YE3531 by TMHMM2.0 at aa 27-49and 53-75;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3845487	3845546	.	-	.	ID=id6163;Note=2 probable transmembrane helices predicted for YE3531 by TMHMM2.0 at aa 27-49and 53-75;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	3845878	3847341	.	-	.	ID=gene3483;Name=YE3532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3532
AM286415.1	EMBL	CDS	3845878	3847341	.	-	0	ID=cds3384;Parent=gene3483;Dbxref=EnsemblGenomes-Gn:YE3532,EnsemblGenomes-Tr:CAL13554,GOA:A1JQ80,InterPro:IPR006680,InterPro:IPR011059,UniProtKB/TrEMBL:A1JQ80,NCBI_GP:CAL13554.1;Name=CAL13554.1;Note=Weakly similar to several including: Rhizobium meliloti hypothetical protein Ra0920 or Sma1677 SWALL:Q92YG0 (EMBL:AE007278) (480 aa) fasta scores: E(): 1.5e-76%2C 54.61 38d in 423 aa%2C Saccharomyces cerevisiae hypothetical 35.9 kDa protein yjl213w or j0234 or hrc331 SWALL:YJV3_YEAST (SWALL:P40896) (331 aa) fasta scores: E(): 4.1e-29%2C 39.57 38d in 331 aa and to Sulfolobus solfataricus prolidase Sso2040 SWALL:Q97WS6 (EMBL:AE006811) (408 aa) fasta scores: E(): 2.8e-22%2C31.52 38d in 425 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P40896;product=hypothetical protein;protein_id=CAL13554.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3847625	3876969	.	+	.	ID=id6164;Note=Type III secretion system ysa;gbkey=misc_feature
AM286415.1	EMBL	gene	3847625	3847876	.	-	.	ID=gene3484;Name=acpY;gbkey=Gene;gene=acpY;gene_biotype=protein_coding;locus_tag=YE3533
AM286415.1	EMBL	CDS	3847625	3847876	.	-	0	ID=cds3385;Parent=gene3484;Dbxref=EnsemblGenomes-Gn:YE3533,EnsemblGenomes-Tr:CAL13555,InterPro:IPR009081,UniProtKB/TrEMBL:A1JQ82,NCBI_GP:CAL13555.1;Name=CAL13555.1;Note=Previously sequenced as acpY;gbkey=CDS;gene=acpY;product=hypothetical protein;protein_id=CAL13555.1;transl_table=11
AM286415.1	EMBL	gene	3847876	3849801	.	-	.	ID=gene3485;Name=YE3534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3534
AM286415.1	EMBL	CDS	3847876	3849801	.	-	0	ID=cds3386;Parent=gene3485;Dbxref=EnsemblGenomes-Gn:YE3534,EnsemblGenomes-Tr:CAL13556,UniProtKB/TrEMBL:A1JQ83,NCBI_GP:CAL13556.1;Name=CAL13556.1;Note=Previously sequenced as yspA;gbkey=CDS;product=Serine rich protein;protein_id=CAL13556.1;transl_table=11
AM286415.1	EMBL	gene	3850012	3851058	.	-	.	ID=gene3486;Name=yspD;gbkey=Gene;gene=yspD;gene_biotype=protein_coding;locus_tag=YE3535
AM286415.1	EMBL	CDS	3850012	3851058	.	-	0	ID=cds3387;Parent=gene3486;Dbxref=EnsemblGenomes-Gn:YE3535,EnsemblGenomes-Tr:CAL13557,GOA:A1JQ84,InterPro:IPR009483,UniProtKB/TrEMBL:A1JQ84,NCBI_GP:CAL13557.1;Name=CAL13557.1;gbkey=CDS;gene=yspD;product=hypothetical protein;protein_id=CAL13557.1;transl_table=11
AM286415.1	EMBL	gene	3851074	3852405	.	-	.	ID=gene3487;Name=yspC;gbkey=Gene;gene=yspC;gene_biotype=protein_coding;locus_tag=YE3536
AM286415.1	EMBL	CDS	3851074	3852405	.	-	0	ID=cds3388;Parent=gene3487;Dbxref=EnsemblGenomes-Gn:YE3536,EnsemblGenomes-Tr:CAL13558,GOA:A1JQ85,InterPro:IPR005427,UniProtKB/TrEMBL:A1JQ85,NCBI_GP:CAL13558.1;Name=CAL13558.1;Note=Previously sequenced as Yersinia enterocolitica YspC SWALL:Q93NK5 (EMBL:AF369954) (444 aa) fasta scores: E(): 2.3e-130%2C 94.59 38d in 444 aa. Also similar in parts to several others including: Caenorhabditis elegans hypothetical 56.9 kDa protein f53a3.4 SWALL:Q9TXQ5 (EMBL:AF025460) (545 aa) fasta scores: E(): 0.014%2C 21.68 id in 452 aa and to Streptococcus mutans glucan-binding protein B SWALL:Q938V2 (EMBL:AY046412) (432 aa) fasta scores: E(): 0.048%2C 22.18 38d in 311 aa;gbkey=CDS;gene=yspC;inference=similar to sequence:INSDC:AY046412;product=membrane protein;protein_id=CAL13558.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3851617	3851685	.	-	.	ID=id6165;Note=1 probable transmembrane helix predicted for YE3536 by TMHMM2.0 at aa 241-263;gbkey=misc_feature;gene=yspC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3852424	3854454	.	-	.	ID=gene3488;Name=yspB;gbkey=Gene;gene=yspB;gene_biotype=protein_coding;locus_tag=YE3537
AM286415.1	EMBL	CDS	3852424	3854454	.	-	0	ID=cds3389;Parent=gene3488;Dbxref=EnsemblGenomes-Gn:YE3537,EnsemblGenomes-Tr:CAL13559,GOA:A1JQ86,InterPro:IPR006972,UniProtKB/TrEMBL:A1JQ86,NCBI_GP:CAL13559.1;Name=CAL13559.1;Note=Previously sequenced as Yersinia enterocolitica Ysp1 or YspB SWALL:Q933M2 (EMBL:AF005744) (676 aa) fasta scores: E(): 4.2e-199%2C 97.18 38d in 676 aa. Also similar to Salmonella typhi type III secretion system effector protein SipB protein or Sty3008 SWALL:Q56134 (EMBL:X82670) (593 aa) fasta scores: E(): 1.6e-11%2C 23.72 38d in 628 aa and to Shigella flexneri 62 kDa membrane antigen ipaB SWALL:IPAB_SHIFL (SWALL:P18011) (580 aa) fasta scores: E(): 3.9e-10%2C 20.89 38d in 579 aa;gbkey=CDS;gene=yspB;inference=similar to sequence:UniProtKB:P18011;product=putative type III secretion system effector protein;protein_id=CAL13559.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3853165	3853269	.	-	.	ID=id6166;Note=3 probable transmembrane helices predicted for YE3537 by TMHMM2.0 at aa 396-430%2C 445-467 and 474-496;gbkey=misc_feature;gene=yspB;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3853054	3853122	.	-	.	ID=id6166;Note=3 probable transmembrane helices predicted for YE3537 by TMHMM2.0 at aa 396-430%2C 445-467 and 474-496;gbkey=misc_feature;gene=yspB;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3852967	3853035	.	-	.	ID=id6166;Note=3 probable transmembrane helices predicted for YE3537 by TMHMM2.0 at aa 396-430%2C 445-467 and 474-496;gbkey=misc_feature;gene=yspB;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3854483	3854992	.	-	.	ID=gene3489;Name=sycB;gbkey=Gene;gene=sycB;gene_biotype=protein_coding;gene_synonym=sycA;locus_tag=YE3538
AM286415.1	EMBL	CDS	3854483	3854992	.	-	0	ID=cds3390;Parent=gene3489;Dbxref=EnsemblGenomes-Gn:YE3538,EnsemblGenomes-Tr:CAL13560,GOA:A1JQ87,InterPro:IPR005415,InterPro:IPR011716,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR016379,UniProtKB/TrEMBL:A1JQ87,NCBI_GP:CAL13560.1;Name=CAL13560.1;Note=Previously sequenced as Yersinia enterocolitica type III secretion apparatus protein SycA or SycB SWALL:Q932S4 (EMBL:AF005744) (169 aa) fasta scores: E(): 1.2e-67%2C 97.63 38d in 169 aa. Also similar to Salmonella typhimurium%2C Salmonella typhi%2C and Salmonella dublin surface presentation of antigens protein SpaT or SicA or Stm2886 or sty3009 SWALL:SPAT_SALTY (SWALL:P40703) (165 aa) fasta scores: E(): 5e-32%2C 53.37 38d in 163 aa;gbkey=CDS;gene=sycB;inference=similar to sequence:UniProtKB:P40703;product=putative type III secretion apparatus protein;protein_id=CAL13560.1;transl_table=11
AM286415.1	EMBL	gene	3855090	3856214	.	-	.	ID=gene3490;Name=ysaU;gbkey=Gene;gene=ysaU;gene_biotype=protein_coding;locus_tag=YE3539
AM286415.1	EMBL	CDS	3855090	3856214	.	-	0	ID=cds3391;Parent=gene3490;Dbxref=EnsemblGenomes-Gn:YE3539,EnsemblGenomes-Tr:CAL13561,GOA:A1JQ88,InterPro:IPR006135,InterPro:IPR006307,InterPro:IPR029025,UniProtKB/TrEMBL:A1JQ88,NCBI_GP:CAL13561.1;Name=CAL13561.1;Note=Previously sequenced as Yersinia enterocolitica type III secretion apparatus protein YsaU SWALL:Q9KKG9 (EMBL:AF005744) (374 aa) fasta scores: E(): 6.4e-138%2C97.59 38d in 374 aa. Also similar to Shigella flexneri type III secretion protein Spa40 SWALL:AAK18475 (EMBL:AF348706) (342 aa) fasta scores: E(): 5.1e-50%2C41.59 38d in 339 aa and to Salmonella typhimurium surface presentation of antigens protein SpaS or Stm2887 SWALL:SPAS_SALTY (SWALL:P40702) (356 aa) fasta scores: E(): 1.6e-47%2C 39.3 38d in 346 aa;gbkey=CDS;gene=ysaU;inference=similar to sequence:UniProtKB:P40702;product=putative type III secretion apparatus protein;protein_id=CAL13561.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3855207	3856214	.	-	.	ID=id6167;Note=Pfam match to entry PF01312 Bac_export_2%2C FlhB HrpN YscU SpaS Family%2C score 332.7%2C E-value 2.8e-97;gbkey=misc_feature;gene=ysaU;inference=protein motif:PFAM:PF01312
AM286415.1	EMBL	sequence_feature	3856065	3856133	.	-	.	ID=id6168;Note=4 probable transmembrane helices predicted for YE3539 by TMHMM2.0 at aa 28-50%2C 76-98%2C 134-153 and 173-195;gbkey=misc_feature;gene=ysaU;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3855921	3855989	.	-	.	ID=id6168;Note=4 probable transmembrane helices predicted for YE3539 by TMHMM2.0 at aa 28-50%2C 76-98%2C 134-153 and 173-195;gbkey=misc_feature;gene=ysaU;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3855756	3855815	.	-	.	ID=id6168;Note=4 probable transmembrane helices predicted for YE3539 by TMHMM2.0 at aa 28-50%2C 76-98%2C 134-153 and 173-195;gbkey=misc_feature;gene=ysaU;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3855630	3855698	.	-	.	ID=id6168;Note=4 probable transmembrane helices predicted for YE3539 by TMHMM2.0 at aa 28-50%2C 76-98%2C 134-153 and 173-195;gbkey=misc_feature;gene=ysaU;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	3856230	3857030	.	-	.	ID=gene3491;Name=ysaT;gbkey=Gene;gene=ysaT;gene_biotype=protein_coding;locus_tag=YE3540
AM286415.1	EMBL	CDS	3856230	3857030	.	-	0	ID=cds3392;Parent=gene3491;Dbxref=EnsemblGenomes-Gn:YE3540,EnsemblGenomes-Tr:CAL13562,GOA:A1JQ90,InterPro:IPR002010,InterPro:IPR006304,UniProtKB/TrEMBL:A1JQ90,NCBI_GP:CAL13562.1;Name=CAL13562.1;Note=Previously sequenced as Yersinia enterocolitica type III secretion apparatus protein YsaT SWALL:Q9KKH0 (EMBL:AF005744) (266 aa) fasta scores: E(): 1.7e-97%2C 100 id in 266 aa. Also highly similar to Salmonella typhimurium surface presentation of antigens protein SpaRor Stm2888 SWALL:SPAR_SALTY (SWALL:P40701) (263 aa) fasta scores: E(): 1.3e-31%2C 39.35 38d in 249 aa;gbkey=CDS;gene=ysaT;inference=similar to sequence:UniProtKB:P40701;product=putative type III secretion apparatus protein;protein_id=CAL13562.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3856245	3856991	.	-	.	ID=id6169;Note=Pfam match to entry PF01311 Bac_export_1%2C Bacterial export proteins%2C family 1%2C score 156.6%2C E-value 2.9e-44;gbkey=misc_feature;gene=ysaT;inference=protein motif:PFAM:PF01311
AM286415.1	EMBL	sequence_feature	3856908	3856976	.	-	.	ID=id6170;Note=6 probable transmembrane helices predicted for YE3540 by TMHMM2.0 at aa 20-42%2C 49-68%2C 83-105%2C 136-158%2C190-212 and 219-241;gbkey=misc_feature;gene=ysaT;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3856830	3856889	.	-	.	ID=id6170;Note=6 probable transmembrane helices predicted for YE3540 by TMHMM2.0 at aa 20-42%2C 49-68%2C 83-105%2C 136-158%2C190-212 and 219-241;gbkey=misc_feature;gene=ysaT;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3856719	3856787	.	-	.	ID=id6170;Note=6 probable transmembrane helices predicted for YE3540 by TMHMM2.0 at aa 20-42%2C 49-68%2C 83-105%2C 136-158%2C190-212 and 219-241;gbkey=misc_feature;gene=ysaT;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3856560	3856628	.	-	.	ID=id6170;Note=6 probable transmembrane helices predicted for YE3540 by TMHMM2.0 at aa 20-42%2C 49-68%2C 83-105%2C 136-158%2C190-212 and 219-241;gbkey=misc_feature;gene=ysaT;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3856398	3856466	.	-	.	ID=id6170;Note=6 probable transmembrane helices predicted for YE3540 by TMHMM2.0 at aa 20-42%2C 49-68%2C 83-105%2C 136-158%2C190-212 and 219-241;gbkey=misc_feature;gene=ysaT;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3856311	3856379	.	-	.	ID=id6170;Note=6 probable transmembrane helices predicted for YE3540 by TMHMM2.0 at aa 20-42%2C 49-68%2C 83-105%2C 136-158%2C190-212 and 219-241;gbkey=misc_feature;gene=ysaT;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	3857030	3857299	.	-	.	ID=gene3492;Name=ysaS;gbkey=Gene;gene=ysaS;gene_biotype=protein_coding;locus_tag=YE3541
AM286415.1	EMBL	CDS	3857030	3857299	.	-	0	ID=cds3393;Parent=gene3492;Dbxref=EnsemblGenomes-Gn:YE3541,EnsemblGenomes-Tr:CAL13563,GOA:A1JQ91,InterPro:IPR002191,InterPro:IPR006306,UniProtKB/TrEMBL:A1JQ91,NCBI_GP:CAL13563.1;Name=CAL13563.1;Note=Similar to Yersinia enterocolitica type III secretion apparatus protein YsaS SWALL:Q93NK6 (EMBL:AF369954) (89 aa) fasta scores: E(): 2.3e-29%2C 100 id in 89 aa%2C and to Salmonella typhimurium%2C Salmonella typhi%2C Salmonella dublin%2C Salmonella enteritidis%2CSalmonella gallinarum%2C Salmonella senftenberg%2C and Salmonella typhisuis surface presentation of antigens protein spaq spaq or stm2889 or sty3012 SWALL:SPAQ_SALTY (SWALL:P40704) (86 aa) fasta scores: E(): 9.3e-15%2C 53.57 id in 84 aa;gbkey=CDS;gene=ysaS;inference=similar to sequence:UniProtKB:P40704;product=type III secretion apparatus protein;protein_id=CAL13563.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3857069	3857296	.	-	.	ID=id6171;Note=Pfam match to entry PF01313 Bac_export_3%2C Bacterial export proteins%2C family 3%2C score 121.3%2C E-value 1.1e-33;gbkey=misc_feature;gene=ysaS;inference=protein motif:PFAM:PF01313
AM286415.1	EMBL	sequence_feature	3857099	3857167	.	-	.	ID=id6172;Note=probable transmembrane helix predicted for YE3541 by TMHMM2.0 at aa 45-67;gbkey=misc_feature;gene=ysaS;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3857315	3857989	.	-	.	ID=gene3493;Name=ysaR;gbkey=Gene;gene=ysaR;gene_biotype=protein_coding;locus_tag=YE3542
AM286415.1	EMBL	CDS	3857315	3857989	.	-	0	ID=cds3394;Parent=gene3493;Dbxref=EnsemblGenomes-Gn:YE3542,EnsemblGenomes-Tr:CAL13564,GOA:A1JQ92,InterPro:IPR005773,InterPro:IPR005838,UniProtKB/TrEMBL:A1JQ92,NCBI_GP:CAL13564.1;Name=CAL13564.1;Note=Similar to Yersinia enterocolitica type III secretion apparatus protein YsaR SWALL:Q93NK7 (EMBL:AF369954) (224 aa) fasta scores: E(): 5e-83%2C 100 38d in 224 aa%2C and to Salmonella typhimurium type III secretion apparatus protein SpaP SWALL:Q57175 (EMBL:U29360) (224 aa) fasta scores: E(): 2.4e-51%2C 60.98 id in 223 aa;gbkey=CDS;gene=ysaR;inference=similar to sequence:INSDC:U29360;product=type III secretion apparatus protein;protein_id=CAL13564.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3857345	3857950	.	-	.	ID=id6173;Note=Pfam match to entry PF00813 FliP%2C FliP family %2Cscore 339.0%2C E-value 3.4e-99;gbkey=misc_feature;gene=ysaR;inference=protein motif:PFAM:PF00813
AM286415.1	EMBL	sequence_feature	3857894	3857959	.	-	.	ID=id6174;Note=4 probable transmembrane helices predicted for YE3542 by TMHMM2.0 at aa 20-41%2C 62-81%2C 169-191 and 198-220;gbkey=misc_feature;gene=ysaR;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3857774	3857833	.	-	.	ID=id6174;Note=4 probable transmembrane helices predicted for YE3542 by TMHMM2.0 at aa 20-41%2C 62-81%2C 169-191 and 198-220;gbkey=misc_feature;gene=ysaR;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3857444	3857512	.	-	.	ID=id6174;Note=4 probable transmembrane helices predicted for YE3542 by TMHMM2.0 at aa 20-41%2C 62-81%2C 169-191 and 198-220;gbkey=misc_feature;gene=ysaR;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3857357	3857425	.	-	.	ID=id6174;Note=4 probable transmembrane helices predicted for YE3542 by TMHMM2.0 at aa 20-41%2C 62-81%2C 169-191 and 198-220;gbkey=misc_feature;gene=ysaR;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	3857369	3857407	.	-	.	ID=id6175;Note=PS01061 Flagella transport protein fliP family signature 2.;gbkey=misc_feature;gene=ysaR;inference=protein motif:Prosite:PS01061
AM286415.1	EMBL	sequence_feature	3857504	3857551	.	-	.	ID=id6176;Note=PS01060 Flagella transport protein fliP family signature 1.;gbkey=misc_feature;gene=ysaR;inference=protein motif:Prosite:PS01060
AM286415.1	EMBL	gene	3857992	3858930	.	-	.	ID=gene3494;Name=ysaQ;gbkey=Gene;gene=ysaQ;gene_biotype=protein_coding;locus_tag=YE3542A
AM286415.1	EMBL	CDS	3857992	3858930	.	-	0	ID=cds3395;Parent=gene3494;Dbxref=EnsemblGenomes-Gn:YE3542A,EnsemblGenomes-Tr:CAL13565,GOA:A1JQ94,InterPro:IPR001172,InterPro:IPR001543,UniProtKB/TrEMBL:A1JQ94,NCBI_GP:CAL13565.1;Name=CAL13565.1;Note=Similar to Yersinia enterocolitica type III secretion apparatus protein YsaQ SWALL:Q9KKH3 (EMBL:AF005744) (312 aa) fasta scores: E(): 4.5e-121%2C99.67 38d in 312 aa%2C and to Salmonella typhi surface presentation of antigens protein spaO or Sty3014 SWALL:SPAO_SALTI (SWALL:Q56022) (303 aa) fasta scores: E(): 4e-06%2C 24.75 38d in 311 aa;gbkey=CDS;gene=ysaQ;inference=similar to sequence:UniProtKB:Q56022;product=type III secretion apparatus protein;protein_id=CAL13565.1;transl_table=11
AM286415.1	EMBL	gene	3858930	3859997	.	-	.	ID=gene3495;Name=YE3543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3543
AM286415.1	EMBL	CDS	3858930	3859997	.	-	0	ID=cds3396;Parent=gene3495;Dbxref=EnsemblGenomes-Gn:YE3543,EnsemblGenomes-Tr:CAL13566,UniProtKB/TrEMBL:A1JQ95,NCBI_GP:CAL13566.1;Name=CAL13566.1;Note=The predicted product of this CDS encompasses two CDS previously published in this bacterium: Q9KKH4 and Q9KKH5;gbkey=CDS;product=type III secretion protein;protein_id=CAL13566.1;transl_table=11
AM286415.1	EMBL	gene	3859969	3860424	.	-	.	ID=gene3496;Name=YE3543A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3543A
AM286415.1	EMBL	CDS	3859969	3860424	.	-	0	ID=cds3397;Parent=gene3496;Dbxref=EnsemblGenomes-Gn:YE3543A,EnsemblGenomes-Tr:CAL13567,UniProtKB/TrEMBL:A1JQ96,NCBI_GP:CAL13567.1;Name=CAL13567.1;Note=Similar to Yersinia enterocolitica orf8 SWALL:Q9KKH6 (EMBL:AF005744) (151 aa) fasta scores: E(): 1.1e-45%2C 100 38d in 151 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF005744;product=hypothetical protein;protein_id=CAL13567.1;transl_table=11
AM286415.1	EMBL	gene	3860424	3861716	.	-	.	ID=gene3497;Name=ysaN;gbkey=Gene;gene=ysaN;gene_biotype=protein_coding;locus_tag=YE3544
AM286415.1	EMBL	CDS	3860424	3861716	.	-	0	ID=cds3398;Parent=gene3497;Dbxref=EnsemblGenomes-Gn:YE3544,EnsemblGenomes-Tr:CAL13568,GOA:A1JQ97,InterPro:IPR000194,InterPro:IPR003593,InterPro:IPR004100,InterPro:IPR005714,InterPro:IPR020003,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQ97,NCBI_GP:CAL13568.1;Name=CAL13568.1;Note=Previously sequenced as Yersinia enterocolitica type III secretion sytem protein YsaN SWALL:O30438 (EMBL:AF005744) (465 aa) fasta scores: E(): 5.2e-164%2C99.76 38d in 421 aa. Note the differing sequence at the very C-termini. Also similar to Salmonella typhimurium%2Cand Salmonella typhi probable ATP synthase SpaL or InvC or Stm2894 or Sty3017 SWALL:SPAL_SALTY (SWALL:P39444) (431 aa) fasta scores: E(): 3.5e-89%2C 56.54 38d in 428 aa%2C and to Shigella flexneri%2C and Shigella sonnei probable ATP synthase SpaL/MxiB SpaL or Spa47 or MxiB SWALL:SPAL_SHIFL (SWALL:P35531) (430 aa) fasta scores: E(): 1.9e-78%2C 51.4 id in 426 aa;gbkey=CDS;gene=ysaN;inference=similar to sequence:UniProtKB:P39444;product=type III secretion sytem protein;protein_id=CAL13568.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3860652	3861479	.	-	.	ID=id6177;Note=Pfam match to entry PF00006 ATP-synt_ab%2C ATP synthase alpha/beta family%2C nucleotide-binding domain %2Cscore 444.2%2C E-value 7.6e-131;gbkey=misc_feature;gene=ysaN;inference=protein motif:PFAM:PF00006
AM286415.1	EMBL	sequence_feature	3860670	3860699	.	-	.	ID=id6178;Note=PS00152 ATP synthase alpha and beta subunits signature.;gbkey=misc_feature;gene=ysaN;inference=protein motif:Prosite:PS00152
AM286415.1	EMBL	sequence_feature	3861216	3861239	.	-	.	ID=id6179;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ysaN;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3861486	3861689	.	-	.	ID=id6180;Note=Pfam match to entry PF02874 ATP-synt_ab_N%2C ATP synthase alpha/beta family%2C beta-barrel domain%2C score 30.7%2C E-value 2.1e-06;gbkey=misc_feature;gene=ysaN;inference=protein motif:PFAM:PF02874
AM286415.1	EMBL	gene	3861720	3862127	.	-	.	ID=gene3498;Name=ysaK;gbkey=Gene;gene=ysaK;gene_biotype=protein_coding;locus_tag=YE3545
AM286415.1	EMBL	CDS	3861720	3862127	.	-	0	ID=cds3399;Parent=gene3498;Dbxref=EnsemblGenomes-Gn:YE3545,EnsemblGenomes-Tr:CAL13569,InterPro:IPR003065,UniProtKB/TrEMBL:A1JQA4,NCBI_GP:CAL13569.1;Name=CAL13569.1;Note=Previously sequenced as Yersinia enterocolitica type III secretion sytem protein YsaK SWALL:O30437 (EMBL:AF005744) (135 aa) fasta scores: E(): 8.2e-55%2C 100 id in 135 aa. Also similar to Sodalis glossinidius InvB SWALL:Q9EZ20 (EMBL:AF306649) (135 aa) fasta scores: E(): 5.1e-07%2C 29.63 38d in 135 aa and to Shigella sonnei surface presentation of antigens protein Spak or spa15 SWALL:SPAK_SHISO (SWALL:Q55296) (133 aa) fasta scores: E(): 0.00069%2C 26.15 38d in 130 aa;gbkey=CDS;gene=ysaK;inference=similar to sequence:UniProtKB:Q55296;product=type III secretion sytem protein;protein_id=CAL13569.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3861837	3862079	.	-	.	ID=id6181;Note=Pfam match to entry PF03519 Invas_SpaK%2C Invasion protein B family%2C score 196.5%2C E-value 2.7e-56;gbkey=misc_feature;gene=ysaK;inference=protein motif:PFAM:PF03519
AM286415.1	EMBL	gene	3862139	3864211	.	-	.	ID=gene3499;Name=ysaV;gbkey=Gene;gene=ysaV;gene_biotype=protein_coding;locus_tag=YE3546
AM286415.1	EMBL	CDS	3862139	3864211	.	-	0	ID=cds3400;Parent=gene3499;Dbxref=EnsemblGenomes-Gn:YE3546,EnsemblGenomes-Tr:CAL13570,GOA:A1JQA5,InterPro:IPR001712,InterPro:IPR006302,InterPro:IPR025505,UniProtKB/TrEMBL:A1JQA5,NCBI_GP:CAL13570.1;Name=CAL13570.1;Note=Previously sequenced as: Yersinia enterocolitica YsaV SWALL:O30436 (EMBL:AF005744) (690 aa) fasta scores: E(): 0%2C 100 38d in 690 aa. Also similar to Salmonella typhimurium%2C and Salmonella typhi invasion protein InvA inva or stm2896 or sty3019 SWALL:INVA_SALTY (SWALL:P35657) (685 aa) fasta scores: E(): 3.1e-136%2C 53.05 38d in 688 aa;gbkey=CDS;gene=ysaV;inference=similar to sequence:UniProtKB:P35657;product=type III secretion system apparatus protein;protein_id=CAL13570.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3862160	3864139	.	-	.	ID=id6182;Note=Pfam match to entry PF00771 FHIPEP%2C FHIPEP family %2Cscore 1294.8%2C E-value 0;gbkey=misc_feature;gene=ysaV;inference=protein motif:PFAM:PF00771
AM286415.1	EMBL	sequence_feature	3864095	3864163	.	-	.	ID=id6183;Note=7 probable transmembrane helices predicted for YE3546 by TMHMM2.0 at aa 17-39%2C 43-64%2C 71-93%2C 108-130%2C199-221%2C 241-263 and 283-305;gbkey=misc_feature;gene=ysaV;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	3864020	3864085	.	-	.	ID=id6183;Note=7 probable transmembrane helices predicted for YE3546 by TMHMM2.0 at aa 17-39%2C 43-64%2C 71-93%2C 108-130%2C199-221%2C 241-263 and 283-305;gbkey=misc_feature;gene=ysaV;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	3863933	3864001	.	-	.	ID=id6183;Note=7 probable transmembrane helices predicted for YE3546 by TMHMM2.0 at aa 17-39%2C 43-64%2C 71-93%2C 108-130%2C199-221%2C 241-263 and 283-305;gbkey=misc_feature;gene=ysaV;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	3863822	3863890	.	-	.	ID=id6183;Note=7 probable transmembrane helices predicted for YE3546 by TMHMM2.0 at aa 17-39%2C 43-64%2C 71-93%2C 108-130%2C199-221%2C 241-263 and 283-305;gbkey=misc_feature;gene=ysaV;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	3863549	3863617	.	-	.	ID=id6183;Note=7 probable transmembrane helices predicted for YE3546 by TMHMM2.0 at aa 17-39%2C 43-64%2C 71-93%2C 108-130%2C199-221%2C 241-263 and 283-305;gbkey=misc_feature;gene=ysaV;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	3863423	3863491	.	-	.	ID=id6183;Note=7 probable transmembrane helices predicted for YE3546 by TMHMM2.0 at aa 17-39%2C 43-64%2C 71-93%2C 108-130%2C199-221%2C 241-263 and 283-305;gbkey=misc_feature;gene=ysaV;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	3863297	3863365	.	-	.	ID=id6183;Note=7 probable transmembrane helices predicted for YE3546 by TMHMM2.0 at aa 17-39%2C 43-64%2C 71-93%2C 108-130%2C199-221%2C 241-263 and 283-305;gbkey=misc_feature;gene=ysaV;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	3863732	3863803	.	-	.	ID=id6184;Note=PS00994 Bacterial export FHIPEP family signature.;gbkey=misc_feature;gene=ysaV;inference=protein motif:Prosite:PS00994
AM286415.1	EMBL	gene	3864208	3865317	.	-	.	ID=gene3500;Name=ysaW;gbkey=Gene;gene=ysaW;gene_biotype=protein_coding;locus_tag=YE3547
AM286415.1	EMBL	CDS	3864208	3865317	.	-	0	ID=cds3401;Parent=gene3500;Dbxref=EnsemblGenomes-Gn:YE3547,EnsemblGenomes-Tr:CAL13571,GOA:A1JQA7,InterPro:IPR010812,InterPro:IPR013401,UniProtKB/TrEMBL:A1JQA7,NCBI_GP:CAL13571.1;Name=CAL13571.1;Note=Previously sequenced as: Yersinia enterocolitica type III secreted effector protein%2C YsaW SWALL:Q9KKH7 (EMBL:AF005744) (373 aa) fasta scores: E(): 1.9e-120%2C90.13 38d in 365 aa%2C and to Salmonella enterica invasion protein invE SWALL:Q54031 (EMBL:U43259) (372 aa) fasta scores: E(): 4.9e-15%2C 27.27 38d in 341 aa. Note the differing N-terminal sequence with that previously published.;gbkey=CDS;gene=ysaW;inference=similar to sequence:INSDC:U43259;product=type III secreted effector protein;protein_id=CAL13571.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3864244	3865317	.	-	.	ID=id6185;Note=Pfam match to entry PF02523 InvE%2C InvE invasion protein%2C score -19.1%2C E-value 8.4e-11;gbkey=misc_feature;gene=ysaW;inference=protein motif:PFAM:PF02523
AM286415.1	EMBL	gene	3865308	3866999	.	-	.	ID=gene3501;Name=ysaC;gbkey=Gene;gene=ysaC;gene_biotype=protein_coding;locus_tag=YE3548
AM286415.1	EMBL	CDS	3865308	3866999	.	-	0	ID=cds3402;Parent=gene3501;Dbxref=EnsemblGenomes-Gn:YE3548,EnsemblGenomes-Tr:CAL13572,GOA:A1JQA8,InterPro:IPR003522,InterPro:IPR004846,InterPro:IPR005644,UniProtKB/TrEMBL:A1JQA8,NCBI_GP:CAL13572.1;Name=CAL13572.1;Note=Previously sequenced as: Yersinia enterocolitica type III secreted effector protein%2C YsaC SWALL:Q9KKH8 (EMBL:AF005744) (525 aa) fasta scores: E(): 8.3e-190%2C97.9 38d in 524 aa. Note the differing sequence at the very C-terminus. Also similar to Salmonella typhimurium InvG protein precursor or Stm2898 SWALL:INVG_SALTY (SWALL:P35672) (562 aa) fasta scores: E(): 4.3e-72%2C 40.11 id in 526 aa;gbkey=CDS;gene=ysaC;inference=similar to sequence:UniProtKB:P35672;product=possible type III secretion system protein;protein_id=CAL13572.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3865428	3866174	.	-	.	ID=id6186;Note=Pfam match to entry PF00263 GSPII_III%2C Bacterial type II and III secretion system protein%2C score 297.1%2CE-value 1.5e-86;gbkey=misc_feature;gene=ysaC;inference=protein motif:PFAM:PF00263
AM286415.1	EMBL	sequence_feature	3866304	3866963	.	-	.	ID=id6187;Note=Pfam match to entry PF03958 NolW-like%2C NolW-like %2Cscore 343.5%2C E-value 1.6e-100;gbkey=misc_feature;gene=ysaC;inference=protein motif:PFAM:PF03958
AM286415.1	EMBL	gene	3866989	3867669	.	-	.	ID=gene3502;Name=ysaE;gbkey=Gene;gene=ysaE;gene_biotype=protein_coding;locus_tag=YE3549
AM286415.1	EMBL	CDS	3866989	3867669	.	-	0	ID=cds3403;Parent=gene3502;Dbxref=EnsemblGenomes-Gn:YE3549,EnsemblGenomes-Tr:CAL13573,GOA:A1JQB0,InterPro:IPR009057,InterPro:IPR018060,UniProtKB/TrEMBL:A1JQB0,NCBI_GP:CAL13573.1;Name=CAL13573.1;Note=C-terminal region is highly similar to that previously sequenced: Yersinia enterocolitica hypothetical protein YsaE SWALL:Q9KKH9 (EMBL:AF005744) (138 aa) fasta scores: E(): 1.3e-51%2C 99.27 38d in 138 aa. Note the N-terminal extension of the product of this CDS compared to that previously published for Yersinia enterocolitica YsaE. The full length CDS is weakly similar to Salmonella typhimurium%2C and Salmonella typhi invasion protein InvF SWALL:INVF_SALTY (SWALL:P39437) (216 aa) fasta scores: E(): 3.6e-09%2C 26.75 38d in 228 aa.;gbkey=CDS;gene=ysaE;inference=similar to sequence:UniProtKB:P39437;product=AraC family regulatory protein;protein_id=CAL13573.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3867016	3867147	.	-	.	ID=id6188;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 36.9%2C E-value 2.9e-08;gbkey=misc_feature;gene=ysaE;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	3867166	3867306	.	-	.	ID=id6189;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 9.3%2C E-value 0.26;gbkey=misc_feature;gene=ysaE;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	3867949	3869178	.	+	.	ID=gene3503;Name=YE3550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3550
AM286415.1	EMBL	CDS	3867949	3869178	.	+	0	ID=cds3404;Parent=gene3503;Dbxref=EnsemblGenomes-Gn:YE3550,EnsemblGenomes-Tr:CAL13574,GOA:A1JQB1,InterPro:IPR019029,UniProtKB/TrEMBL:A1JQB1,NCBI_GP:CAL13574.1;Name=CAL13574.1;Note=Weakly similar over the whole range to CDS associated with virulence including: Salmonella typhimurium protein required for invasion of epithelial cells PrgH or Stm2874 SWALL:PRGH_SALTY (SWALL:P41783) (392 aa) fasta scores: E(): 3.3e-11%2C 22.22 38d in 396 aa%2C and to Shigella flexneri and Shigella sonnei MxiG protein involved in the intracellular dissemination of shigella SWALL:MXIG_SHIFL (SWALL:Q57332) (371 aa) fasta scores: E(): 0.015%2C 21.05 38d in 399 aa. The N-terminus is identical to an internal region of Yersinia enterocolitica hypothetical protein Orf7 SWALL:Q9KKI0 (EMBL:AF005744) (168 aa) fasta scores: E(): 1.9e-28%2C 100 38d in 88 aa. Internal region is highly similar to the C-terminus of Yersinia enterocolitica hypothetical protein Orf6 SWALL:Q9KKI1 (EMBL:AF005744) (214 aa) fasta scores: E(): 3.1e-78%2C 98.59 38d in 214 aa.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q57332;product=hypothetical protein;protein_id=CAL13574.1;transl_table=11
AM286415.1	EMBL	gene	3869209	3869517	.	+	.	ID=gene3504;Name=YE3551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3551
AM286415.1	EMBL	CDS	3869209	3869517	.	+	0	ID=cds3405;Parent=gene3504;Dbxref=EnsemblGenomes-Gn:YE3551,EnsemblGenomes-Tr:CAL13575,UniProtKB/TrEMBL:A1JQB2,NCBI_GP:CAL13575.1;Name=CAL13575.1;Note=No significant database matches;gbkey=CDS;product=hypothetical protein;protein_id=CAL13575.1;transl_table=11
AM286415.1	EMBL	gene	3869576	3869878	.	+	.	ID=gene3505;Name=ysaI;gbkey=Gene;gene=ysaI;gene_biotype=protein_coding;locus_tag=YE3552
AM286415.1	EMBL	CDS	3869576	3869878	.	+	0	ID=cds3406;Parent=gene3505;Dbxref=EnsemblGenomes-Gn:YE3552,EnsemblGenomes-Tr:CAL13576,UniProtKB/TrEMBL:A1JQB4,NCBI_GP:CAL13576.1;Name=CAL13576.1;Note=Highly similar to Yersinia enterocolitica hypothetical protein YsaI SWALL:Q9KKI2 (EMBL:AF005744) (100 aa) fasta scores: E(): 5.1e-35%2C 99 38d in 100 aa. C-terminus is similar to the C-terminal region of Salmonella typhi pathogenicity 1 island effector protein PrgJ or STY2993 SWALL:Q8Z4A1 (EMBL:AL627276) (101 aa) fasta scores: E(): 1%2C 30 38d in 60 aa;gbkey=CDS;gene=ysaI;inference=similar to sequence:INSDC:AL627276;product=putative virulence associated protein;protein_id=CAL13576.1;transl_table=11
AM286415.1	EMBL	gene	3869882	3870625	.	+	.	ID=gene3506;Name=ysaJ;gbkey=Gene;gene=ysaJ;gene_biotype=protein_coding;locus_tag=YE3553
AM286415.1	EMBL	CDS	3869882	3870625	.	+	0	ID=cds3407;Parent=gene3506;Dbxref=EnsemblGenomes-Gn:YE3553,EnsemblGenomes-Tr:CAL13577,GOA:A1JQB5,InterPro:IPR003282,InterPro:IPR006182,UniProtKB/TrEMBL:A1JQB5,NCBI_GP:CAL13577.1;Name=CAL13577.1;Note=Previously sequenced as Yersinia enterocolitica type III secretion apparatus lipoprotein YsaJ SWALL:Q9KKI3 (EMBL:AF005744) (247 aa) fasta scores: E(): 1.4e-89%2C 100 id in 247 aa%2C and to Escherichia coli O157:H7 putative lipoprotein of type III secretion apparatus z4180 or ecs3716 SWALL:Q8X6G6 (EMBL:AE005514) (244 aa) fasta scores: E(): 1.8e-29%2C 42.41 38d in 224 aa;gbkey=CDS;gene=ysaJ;inference=similar to sequence:INSDC:AF005744;product=type III secretion system apparatus lipoprotein;protein_id=CAL13577.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3869882	3870466	.	+	.	ID=id6190;Note=Pfam match to entry PF01514 YscJ_FliF%2C Secretory protein of YscJ/FliF family%2C score 159.7%2C E-value 3.3e-45;gbkey=misc_feature;gene=ysaJ;inference=protein motif:PFAM:PF01514
AM286415.1	EMBL	sequence_feature	3869906	3869938	.	+	.	ID=id6191;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=ysaJ;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3870491	3870559	.	+	.	ID=id6192;Note=1 probable transmembrane helix predicted for YE3553 by TMHMM2.0 at aa 204-226;gbkey=misc_feature;gene=ysaJ;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3870622	3871170	.	+	.	ID=gene3507;Name=YE3554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3554
AM286415.1	EMBL	CDS	3870622	3871170	.	+	0	ID=cds3408;Parent=gene3507;Dbxref=EnsemblGenomes-Gn:YE3554,EnsemblGenomes-Tr:CAL13578,GOA:A1JQB7,InterPro:IPR013388,UniProtKB/TrEMBL:A1JQB7,NCBI_GP:CAL13578.1;Name=CAL13578.1;Note=No significant database matches to the full length CDS. N-terminus is highly similar to the N-terminal region of the previously sequenced Yersinia enterocolitica hypothetical protein SWALL:Q93NL2 (EMBL:AF369954) (191 aa) fasta scores: E(): 2.9e-60%2C 98.67 38d in 151 aa.;gbkey=CDS;inference=similar to sequence:INSDC:AF369954;product=hypothetical protein;protein_id=CAL13578.1;transl_table=11
AM286415.1	EMBL	gene	3871205	3871849	.	+	.	ID=gene3508;Name=YE3555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3555
AM286415.1	EMBL	CDS	3871205	3871849	.	+	0	ID=cds3409;Parent=gene3508;Dbxref=EnsemblGenomes-Gn:YE3555,EnsemblGenomes-Tr:CAL13579,UniProtKB/TrEMBL:A1JQB8,NCBI_GP:CAL13579.1;Name=CAL13579.1;Note=Highly similar to Yersinia enterocolitica hypothetical protein SWALL:Q93NL3 (EMBL:AF369954) (230 aa) fasta scores: E(): 1.2e-76%2C 98.7 38d in 231 aa. Weakly similar to Salmonella typhimurium oxygen-regulated invasion protein orgB or STM2869 SWALL:ORGB_SALTY (SWALL:P58654) (226 aa) fasta scores: E(): 0.11%2C 22.92 38d in 205 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P58654;product=hypothetical protein;protein_id=CAL13579.1;transl_table=11
AM286415.1	EMBL	gene	3871917	3872288	.	+	.	ID=gene3509;Name=YE3556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3556
AM286415.1	EMBL	CDS	3871917	3872288	.	+	0	ID=cds3410;Parent=gene3509;Dbxref=EnsemblGenomes-Gn:YE3556,EnsemblGenomes-Tr:CAL13580,UniProtKB/TrEMBL:A1JQB9,NCBI_GP:CAL13580.1;Name=CAL13580.1;Note=Poor database matches. Similar to the C-terminal region of the previously sequenced Yersinia enterocolitica hypothetical protein Orf3 SWALL:Q9KKI6 (EMBL:AF005744) (212 aa) fasta scores: E(): 1.2e-53%2C 93.47 38d in 123 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF005744;product=hypothetical protein;protein_id=CAL13580.1;transl_table=11
AM286415.1	EMBL	gene	3872301	3872777	.	+	.	ID=gene3510;Name=ysaH;gbkey=Gene;gene=ysaH;gene_biotype=protein_coding;locus_tag=YE3557
AM286415.1	EMBL	CDS	3872301	3872777	.	+	0	ID=cds3411;Parent=gene3510;Dbxref=EnsemblGenomes-Gn:YE3557,EnsemblGenomes-Tr:CAL13581,InterPro:IPR008258,InterPro:IPR023346,UniProtKB/TrEMBL:A1JQC0,NCBI_GP:CAL13581.1;Name=CAL13581.1;Note=Previously sequenced as:Yersinia enterocolitica hypothetical protein YsaH SWALL:Q9KKJ1 (EMBL:AF005744) (158 aa) fasta scores: E(): 1.6e-61%2C 99.36 38d in 158 aa. Also highly similar to Salmonella typhimurium type III secreted invasion protein IagB or STM2877 SWALL:IAGB_SALTY (SWALL:P43017) (160 aa) fasta scores: E(): 6.5e-13%2C 40.6 id in 133 aa.;gbkey=CDS;gene=ysaH;inference=similar to sequence:UniProtKB:P43017;product=possible type III secretion system effector protein;protein_id=CAL13581.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3872400	3872717	.	+	.	ID=id6193;Note=Pfam match to entry PF01464 SLT%2C Transglycosylase SLT domain%2C score 64.7%2C E-value 1.3e-16;gbkey=misc_feature;gene=ysaH;inference=protein motif:PFAM:PF01464
AM286415.1	EMBL	gene	3872952	3873437	.	+	.	ID=gene3511;Name=YE3558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3558
AM286415.1	EMBL	CDS	3872952	3873437	.	+	0	ID=cds3412;Parent=gene3511;Dbxref=EnsemblGenomes-Gn:YE3558,EnsemblGenomes-Tr:CAL13582,GOA:A1JQC1,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JQC1,NCBI_GP:CAL13582.1;Name=CAL13582.1;Note=Identical to the previously sequenced: Yersinia enterocolitica Orf1 SWALL:Q9KKJ0 (EMBL:AF005744) (161 aa) fasta scores: E(): 1.3e-60%2C 100 38d in 161 aa. Similar to N-terminal region Salmonella typhimurium putative inner membrane protein STM0341 SWALL:Q8ZRH8 (EMBL:AE008710) (254 aa) fasta scores: E(): 4.1e-09%2C 31.44 38d in 159 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF005744;product=putative membrane protein;protein_id=CAL13582.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3873357	3873425	.	+	.	ID=id6194;Note=1 probable transmembrane helix predicted for YE3558 by TMHMM2.0 at aa 136-158;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3873442	3873876	.	+	.	ID=gene3512;Name=YE3559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3559
AM286415.1	EMBL	CDS	3873442	3873876	.	+	0	ID=cds3413;Parent=gene3512;Dbxref=EnsemblGenomes-Gn:YE3559,EnsemblGenomes-Tr:CAL13583,UniProtKB/TrEMBL:A1JQC2,NCBI_GP:CAL13583.1;Name=CAL13583.1;Note=Similar to the C-terminal region Yersinia enterocolitica Orf2 SWALL:Q9KKI9 (EMBL:AF005744) (170 aa) fasta scores: E(): 3.1e-51%2C 99.3 38d in 144 aa%2C and to Vibrio cholerae lipoprotein-related protein vc1064 SWALL:Q9KT41 (EMBL:AE004188) (143 aa) fasta scores: E(): 0.46%2C 21.36 38d in 117 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF005744;product=putative exported protein;protein_id=CAL13583.1;transl_table=11
AM286415.1	EMBL	gene	3873905	3874615	.	+	.	ID=gene3513;Name=ysrR;gbkey=Gene;gene=ysrR;gene_biotype=protein_coding;locus_tag=YE3560
AM286415.1	EMBL	CDS	3873905	3874615	.	+	0	ID=cds3414;Parent=gene3513;Dbxref=EnsemblGenomes-Gn:YE3560,EnsemblGenomes-Tr:CAL13584,GOA:A1JQC4,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JQC4,NCBI_GP:CAL13584.1;Name=CAL13584.1;Note=Two-component regulatory system family%2C response regulator protein. Previously sequenced as Yersinia enterocolitica LuxR/UhpA family of transcriptional regulator YsrR SWALL:Q9KKI8 (EMBL:AF005744) (236 aa) fasta scores: E(): 1.5e-90%2C 98.72 38d in 236 aa. C-terminal region is similar Escherichia coli%2C and Escherichia coli O157:H7 fimbriae Z protein FimZ SWALL:FIMZ_ECOLI (SWALL:P21502) (210 aa) fasta scores: E(): 4.1e-12%2C 33.33 id in 183 aa. Similar to YE3578%2C 81.356 38dentity (82.051 ungapped) in 236 aa overlap;gbkey=CDS;gene=ysrR;inference=similar to sequence:UniProtKB:P21502;product=response regulator protein;protein_id=CAL13584.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3873923	3874372	.	+	.	ID=id6195;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 31.0%2C E-value 1.8e-06;gbkey=misc_feature;gene=ysrR;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	3874424	3874612	.	+	.	ID=id6196;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 48.8%2C E-value 7.8e-12;gbkey=misc_feature;gene=ysrR;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	gene	3874599	3876968	.	+	.	ID=gene3514;Name=ysrS;gbkey=Gene;gene=ysrS;gene_biotype=protein_coding;locus_tag=YE3561
AM286415.1	EMBL	CDS	3874599	3876968	.	+	0	ID=cds3415;Parent=gene3514;Dbxref=EnsemblGenomes-Gn:YE3561,EnsemblGenomes-Tr:CAL13585,GOA:A1JQC5,InterPro:IPR001638,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR011006,UniProtKB/TrEMBL:A1JQC5,NCBI_GP:CAL13585.1;Name=CAL13585.1;Note=Two-component regulatory system family%2C sensor kinase protein. Previously sequenced as Yersinia enterocolitica YsrS SWALL:Q9KKI7 (EMBL:AF005744) (791 aa) fasta scores: E(): 0%2C 99.62 38d in 789 aa. N-terminus region is similar to the N-terminal region of Burkholderia cepacia putative sensory protein CblE SWALL:AAL92877 (EMBL:AY082893) (717 aa) fasta scores: E(): 3.1e-25%2C27.15 38d in 556 aa. Similar to YE3579%2C 87.134 0dentity (87.35638ngapped) in 785 aa overlap. Note the large overlap with the upstream CDS.;gbkey=CDS;gene=ysrS;inference=similar to sequence:INSDC:AY082893;product=sensor kinase protein;protein_id=CAL13585.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3875415	3875483	.	+	.	ID=id6197;Note=probable transmembrane helix predicted for YE3561 by TMHMM2.0 at aa 291-313;gbkey=misc_feature;gene=ysrS;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3875520	3875717	.	+	.	ID=id6198;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 25.0%2C E-value 8e-05;gbkey=misc_feature;gene=ysrS;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	3875859	3876215	.	+	.	ID=id6199;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 103.2%2C E-value 3.4e-28;gbkey=misc_feature;gene=ysrS;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	3876582	3876953	.	+	.	ID=id6200;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 77.1%2C E-value 2.4e-20;gbkey=misc_feature;gene=ysrS;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	3876961	3877209	.	+	.	ID=gene3515;Name=YE3561A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3561A
AM286415.1	EMBL	CDS	3876961	3877209	.	+	0	ID=cds3416;Parent=gene3515;Dbxref=EnsemblGenomes-Gn:YE3561A,EnsemblGenomes-Tr:CAL13586,GOA:A1JQC6,InterPro:IPR008207,UniProtKB/TrEMBL:A1JQC6,NCBI_GP:CAL13586.1;Name=CAL13586.1;Note=Previously published: Yersinia enterocolitica OrfA SWALL:Q937S6 (EMBL:AF005744) (64 aa) fasta scores: E(): 5.2e-23%2C 100 38d in 64 aa%3B No significant database matches;gbkey=CDS;inference=similar to sequence:INSDC:AF005744;product=hypothetical protein;protein_id=CAL13586.1;transl_table=11
AM286415.1	EMBL	gene	3877682	3878191	.	+	.	ID=gene3516;Name=YE3562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3562
AM286415.1	EMBL	CDS	3877682	3878191	.	+	0	ID=cds3417;Parent=gene3516;Dbxref=EnsemblGenomes-Gn:YE3562,EnsemblGenomes-Tr:CAL13587,GOA:A1JQC7,InterPro:IPR016174,UniProtKB/TrEMBL:A1JQC7,NCBI_GP:CAL13587.1;Name=CAL13587.1;Note=Weakly similar to Escherichia coli cytochrome b561 CybB SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 0.00025%2C 26.16 38d in 172 aa%2C and to Yersinia pestis putative membrane protein YPO2316 SWALL:Q8ZE67 (EMBL:AJ414152) (184 aa) fasta scores: E(): 1.5e-08%2C28.49 38d in 179 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P08732;product=putative membrane protein;protein_id=CAL13587.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3877709	3877777	.	+	.	ID=id6201;Note=4 probable transmembrane helices predicted for YE3562 by TMHMM2.0 at aa 10-32%2C 45-67%2C 82-104 and 131-153;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3877814	3877882	.	+	.	ID=id6201;Note=4 probable transmembrane helices predicted for YE3562 by TMHMM2.0 at aa 10-32%2C 45-67%2C 82-104 and 131-153;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3877925	3877993	.	+	.	ID=id6201;Note=4 probable transmembrane helices predicted for YE3562 by TMHMM2.0 at aa 10-32%2C 45-67%2C 82-104 and 131-153;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3878072	3878140	.	+	.	ID=id6201;Note=4 probable transmembrane helices predicted for YE3562 by TMHMM2.0 at aa 10-32%2C 45-67%2C 82-104 and 131-153;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	3878242	3878727	.	+	.	ID=gene3517;Name=YE3563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3563
AM286415.1	EMBL	CDS	3878242	3878727	.	+	0	ID=cds3418;Parent=gene3517;Dbxref=EnsemblGenomes-Gn:YE3563,EnsemblGenomes-Tr:CAL13588,GOA:A1JQC8,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JQC8,NCBI_GP:CAL13588.1;Name=CAL13588.1;Note=N-terminal region is similar to Yersinia pestis hypothetical protein YPO0818 SWALL:Q8ZHR7 (EMBL:AJ414144) (138 aa) fasta scores: E(): 1.1e-13%2C 45.45 38d in 99 aa%2Cand to Salmonella typhi putative membrane protein STY0035 SWALL:Q8Z9P4 (EMBL:AL627265) (149 aa) fasta scores: E(): 0.021%2C 26.01 38d in 123 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627265;product=hypothetical protein;protein_id=CAL13588.1;transl_table=11
AM286415.1	EMBL	gene	3878724	3879266	.	+	.	ID=gene3518;Name=yst1C;gbkey=Gene;gene=yst1C;gene_biotype=protein_coding;locus_tag=YE3564
AM286415.1	EMBL	CDS	3878724	3879266	.	+	0	ID=cds3419;Parent=gene3518;Dbxref=EnsemblGenomes-Gn:YE3564,EnsemblGenomes-Tr:CAL13589,UniProtKB/TrEMBL:A1JQC9,NCBI_GP:CAL13589.1;Name=CAL13589.1;Note=Weakly similar to the C-terminal regions of Aeromonas salmonicida general secretion pathway protein C ExeC SWALL:GSPC_AERSA (SWALL:P45772) (290 aa) fasta scores: E(): 0.00021%2C 29.18 38d in 185 aa and Escherichia coli EtpC protein SWALL:O32565 (EMBL:Y09824) (291 aa) fasta scores: E(): 2.1e-05%2C 32.27 38d in 158 aa;gbkey=CDS;gene=yst1C;inference=similar to sequence:UniProtKB:P45772;product=general secretion pathway protein C;protein_id=CAL13589.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3878730	3889976	.	+	.	ID=id6202;Note=General secretion pathway operon yst1;gbkey=misc_feature
AM286415.1	EMBL	gene	3879335	3881311	.	+	.	ID=gene3519;Name=YE3565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3565
AM286415.1	EMBL	CDS	3879335	3881311	.	+	0	ID=cds3420;Parent=gene3519;Dbxref=EnsemblGenomes-Gn:YE3565,EnsemblGenomes-Tr:CAL13590,GOA:A1JQD0,InterPro:IPR001775,InterPro:IPR004846,InterPro:IPR005644,InterPro:IPR013356,UniProtKB/TrEMBL:A1JQD0,NCBI_GP:CAL13590.1;Name=CAL13590.1;Note=Similar to Erwinia carotovora general secretion pathway protein D precursor outD SWALL:GSPD_ERWCA (SWALL:P31701) (650 aa) fasta scores: E(): 5.8e-49%2C 54.19 id in 644 aa%2C and to Yersinia pestis general secretion pathway protein D YPO0816 SWALL:Q8ZHR9 (EMBL:AJ414144) (640 aa) fasta scores: E(): 1.8e-105%2C 48.97 38d in 633 aa. CDS is extended at the N-terminus in comparison to some orthologues. Similar to YE3349%2C 50.850 38dentity (51.811 ungapped) in 647 aa overlap;gbkey=CDS;inference=similar to sequence:UniProtKB:P31701;product=general secretion pathway protein D;protein_id=CAL13590.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3880067	3880159	.	+	.	ID=id6203;Note=Pfam match to entry PF00263 GSPII_III%2C Bacterial type II and III secretion system protein%2C score 20.0%2CE-value 1.6e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00263
AM286415.1	EMBL	sequence_feature	3880310	3881125	.	+	.	ID=id6204;Note=Pfam match to entry PF00263 GSPII_III%2C Bacterial type II and III secretion system protein%2C score 341.1%2CE-value 8.1e-100;gbkey=misc_feature;inference=protein motif:PFAM:PF00263
AM286415.1	EMBL	gene	3881308	3882804	.	+	.	ID=gene3520;Name=yst1E;gbkey=Gene;gene=yst1E;gene_biotype=protein_coding;locus_tag=YE3566
AM286415.1	EMBL	CDS	3881308	3882804	.	+	0	ID=cds3421;Parent=gene3520;Dbxref=EnsemblGenomes-Gn:YE3566,EnsemblGenomes-Tr:CAL13591,GOA:A1JQD2,InterPro:IPR001482,InterPro:IPR003593,InterPro:IPR013369,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQD2,NCBI_GP:CAL13591.1;Name=CAL13591.1;Note=Similar to Erwinia carotovora general secretion pathway protein E OutE SWALL:GSPE_ERWCA (SWALL:P31703) (498 aa) fasta scores: E(): 8e-102%2C 62.02 38d in 495 aa%2Cand to Aeromonas hydrophila general secretion pathway protein E ExeE SWALL:GSPE_AERHY (SWALL:P31741) (501 aa) fasta scores: E(): 6.5e-105%2C 63.87 38d in 490 aa. Similar to YE3348%2C 56.996 38dentity (57.9500ngapped) in 486 aa overlap;gbkey=CDS;gene=yst1E;inference=similar to sequence:UniProtKB:P31741;product=general secretion pathway protein E;protein_id=CAL13591.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3881635	3882480	.	+	.	ID=id6205;Note=Pfam match to entry PF00437 GSPII_E%2C Type II/IV secretion system protein%2C score 639.8%2C E-value 9.5e-190;gbkey=misc_feature;gene=yst1E;inference=protein motif:PFAM:PF00437
AM286415.1	EMBL	sequence_feature	3882070	3882093	.	+	.	ID=id6206;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=yst1E;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3882247	3882291	.	+	.	ID=id6207;Note=PS00662 Bacterial type II secretion system protein E signature.;gbkey=misc_feature;gene=yst1E;inference=protein motif:Prosite:PS00662
AM286415.1	EMBL	gene	3882801	3884018	.	+	.	ID=gene3521;Name=yst1F;gbkey=Gene;gene=yst1F;gene_biotype=protein_coding;locus_tag=YE3567
AM286415.1	EMBL	CDS	3882801	3884018	.	+	0	ID=cds3422;Parent=gene3521;Dbxref=EnsemblGenomes-Gn:YE3567,EnsemblGenomes-Tr:CAL13592,GOA:A1JQD4,InterPro:IPR001992,InterPro:IPR003004,InterPro:IPR011850,InterPro:IPR018076,UniProtKB/TrEMBL:A1JQD4,NCBI_GP:CAL13592.1;Name=CAL13592.1;Note=Similar to Erwinia carotovora general secretion pathway protein F OutF SWALL:GSPF_ERWCA (SWALL:P31705) (408 aa) fasta scores: E(): 5.6e-84%2C 60.75 38d in 400 aa%2Cand to Aeromonas hydrophila general secretion pathway protein F ExeF SWALL:GSPF_AERHY (SWALL:P31743) (388 aa) fasta scores: E(): 4.9e-72%2C 54.18 38d in 382 aa;gbkey=CDS;gene=yst1F;inference=similar to sequence:UniProtKB:P31743;product=general secretion pathway protein F;protein_id=CAL13592.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3883014	3884000	.	+	.	ID=id6208;Note=Pfam match to entry PF00482 GSPII_F%2C Bacterial type II secretion system protein F domain%2C score 541.3%2CE-value 4.3e-160;gbkey=misc_feature;gene=yst1F;inference=protein motif:PFAM:PF00482
AM286415.1	EMBL	sequence_feature	3883296	3883382	.	+	.	ID=id6209;Note=PS00874 Bacterial type II secretion system protein F signature.;gbkey=misc_feature;gene=yst1F;inference=protein motif:Prosite:PS00874
AM286415.1	EMBL	sequence_feature	3883311	3883379	.	+	.	ID=id6210;Note=3 probable transmembrane helices predicted for YE3567 by TMHMM2.0 at aa 165-187%2C 218-237 and 370-392;gbkey=misc_feature;gene=yst1F;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3883470	3883529	.	+	.	ID=id6210;Note=3 probable transmembrane helices predicted for YE3567 by TMHMM2.0 at aa 165-187%2C 218-237 and 370-392;gbkey=misc_feature;gene=yst1F;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3883926	3883994	.	+	.	ID=id6210;Note=3 probable transmembrane helices predicted for YE3567 by TMHMM2.0 at aa 165-187%2C 218-237 and 370-392;gbkey=misc_feature;gene=yst1F;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3884050	3884517	.	+	.	ID=gene3522;Name=yst1G;gbkey=Gene;gene=yst1G;gene_biotype=protein_coding;locus_tag=YE3568
AM286415.1	EMBL	CDS	3884050	3884517	.	+	0	ID=cds3423;Parent=gene3522;Dbxref=EnsemblGenomes-Gn:YE3568,EnsemblGenomes-Tr:CAL13593,GOA:A1JQD5,InterPro:IPR000983,InterPro:IPR010054,InterPro:IPR012902,InterPro:IPR013545,UniProtKB/TrEMBL:A1JQD5,NCBI_GP:CAL13593.1;Name=CAL13593.1;Note=Similar to Erwinia carotovora general secretion pathway protein G precursor OutG SWALL:GSPG_ERWCA (SWALL:P31586) (156 aa) fasta scores: E(): 6e-37%2C 73.13 id in 134 aa%2C and to Aeromonas hydrophila general secretion pathway protein G precursor ExeG SWALL:GSPG_AERHY (SWALL:P31733) (143 aa) fasta scores: E(): 2.2e-38%2C 73.18 38d in 138 aa. Similar to YE3346%2C60.976 38dentity (60.9760ngapped) in 123 aa overlap;gbkey=CDS;gene=yst1G;inference=similar to sequence:UniProtKB:P31733;product=general secretion pathway protein G precursor;protein_id=CAL13593.1;transl_table=11
AM286415.1	EMBL	gene	3884517	3885086	.	+	.	ID=gene3523;Name=yst1H;gbkey=Gene;gene=yst1H;gene_biotype=protein_coding;locus_tag=YE3569
AM286415.1	EMBL	CDS	3884517	3885086	.	+	0	ID=cds3424;Parent=gene3523;Dbxref=EnsemblGenomes-Gn:YE3569,EnsemblGenomes-Tr:CAL13594,GOA:A1JQD6,InterPro:IPR002416,InterPro:IPR012902,InterPro:IPR022346,UniProtKB/TrEMBL:A1JQD6,NCBI_GP:CAL13594.1;Name=CAL13594.1;gbkey=CDS;gene=yst1H;product=general secretion pathway protein H;protein_id=CAL13594.1;transl_table=11
AM286415.1	EMBL	gene	3885092	3885454	.	+	.	ID=gene3524;Name=yst1I;gbkey=Gene;gene=yst1I;gene_biotype=protein_coding;locus_tag=YE3570
AM286415.1	EMBL	CDS	3885092	3885454	.	+	0	ID=cds3425;Parent=gene3524;Dbxref=EnsemblGenomes-Gn:YE3570,EnsemblGenomes-Tr:CAL13595,GOA:A1JQD7,InterPro:IPR003413,InterPro:IPR010052,InterPro:IPR012902,UniProtKB/TrEMBL:A1JQD7,NCBI_GP:CAL13595.1;Name=CAL13595.1;Note=Similar to Erwinia carotovora general secretion pathway protein I precursor OutI SWALL:GSPI_ERWCA (SWALL:P31588) (121 aa) fasta scores: E(): 6.3e-22%2C 50.86 id in 116 aa%2C and to Aeromonas hydrophila general secretion pathway protein I precursor ExeI SWALL:GSPI_AERHY (SWALL:P31737) (119 aa) fasta scores: E(): 2.6e-21%2C 50.86 38d in 116 aa;gbkey=CDS;gene=yst1I;inference=similar to sequence:UniProtKB:P31737;product=general secretion pathway protein I precursor;protein_id=CAL13595.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3885101	3885163	.	+	.	ID=id6211;Note=PS00409 Prokaryotic N-terminal methylation site.;gbkey=misc_feature;gene=yst1I;inference=protein motif:Prosite:PS00409
AM286415.1	EMBL	sequence_feature	3885107	3885448	.	+	.	ID=id6212;Note=Pfam match to entry PF02501 GSPII_IJ%2C Bacterial type II secretion system protein I/J%2C score 149.0%2CE-value 5.3e-42;gbkey=misc_feature;gene=yst1I;inference=protein motif:PFAM:PF02501
AM286415.1	EMBL	gene	3885451	3886050	.	+	.	ID=gene3525;Name=yst1J;gbkey=Gene;gene=yst1J;gene_biotype=protein_coding;locus_tag=YE3570a
AM286415.1	EMBL	CDS	3885451	3886050	.	+	0	ID=cds3426;Parent=gene3525;Dbxref=EnsemblGenomes-Gn:YE3570a,EnsemblGenomes-Tr:CAL13596,GOA:A1JQD9,InterPro:IPR010055,InterPro:IPR012902,UniProtKB/TrEMBL:A1JQD9,NCBI_GP:CAL13596.1;Name=CAL13596.1;Note=Similar to Erwinia carotovora general secretion pathway protein J precursor OutJ SWALL:GSPJ_ERWCA (SWALL:P31589) (216 aa) fasta scores: E(): 2.7e-25%2C 37.81 id in 201 aa%2C and to Aeromonas hydrophila general secretion pathway protein J precursor ExeJ SWALL:GSPJ_AERHY (SWALL:P31739) (207 aa) fasta scores: E(): 7.7e-24%2C 37.31 38d in 201 aa. The CDS appears to be truncated at the N-terminus in comparison to the E. carotovora protein%2C but is a similar length to other orthologues;gbkey=CDS;gene=yst1J;inference=similar to sequence:UniProtKB:P31739;product=putative general secretion pathway protein J precursor;protein_id=CAL13596.1;transl_table=11
AM286415.1	EMBL	gene	3886040	3887077	.	+	.	ID=gene3526;Name=yst1K;gbkey=Gene;gene=yst1K;gene_biotype=protein_coding;locus_tag=YE3571
AM286415.1	EMBL	CDS	3886040	3887077	.	+	0	ID=cds3427;Parent=gene3526;Dbxref=EnsemblGenomes-Gn:YE3571,EnsemblGenomes-Tr:CAL13597,GOA:A1JQE0,InterPro:IPR005628,UniProtKB/TrEMBL:A1JQE0,NCBI_GP:CAL13597.1;Name=CAL13597.1;Note=Similar to Erwinia carotovora general secretion pathway protein K OutK SWALL:GSPK_ERWCA (SWALL:P31706) (328 aa) fasta scores: E(): 2.6e-17%2C 33.13 38d in 341 aa%2Cand to Aeromonas hydrophila general secretion pathway protein K ExeK SWALL:GSPK_AERHY (SWALL:P31760) (331 aa) fasta scores: E(): 9.8e-15%2C 31.01 38d in 345 aa;gbkey=CDS;gene=yst1K;inference=similar to sequence:UniProtKB:P31760;product=putative general secretion pathway protein K;protein_id=CAL13597.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3886046	3887050	.	+	.	ID=id6213;Note=Pfam match to entry PF03934 GspK%2C General secretion pathway protein K%2C score 160.7%2C E-value 1.7e-45;gbkey=misc_feature;gene=yst1K;inference=protein motif:PFAM:PF03934
AM286415.1	EMBL	sequence_feature	3886058	3886117	.	+	.	ID=id6214;Note=1 probable transmembrane helix predicted for YE3571 by TMHMM2.0 at aa 7-26;gbkey=misc_feature;gene=yst1K;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3887079	3888278	.	+	.	ID=gene3527;Name=yst1L;gbkey=Gene;gene=yst1L;gene_biotype=protein_coding;locus_tag=YE3572
AM286415.1	EMBL	CDS	3887079	3888278	.	+	0	ID=cds3428;Parent=gene3527;Dbxref=EnsemblGenomes-Gn:YE3572,EnsemblGenomes-Tr:CAL13598,GOA:A1JQE1,InterPro:IPR007812,InterPro:IPR024230,InterPro:IPR025691,UniProtKB/TrEMBL:A1JQE1,NCBI_GP:CAL13598.1;Name=CAL13598.1;Note=Similar to Aeromonas hydrophila general secretion pathway protein L ExeL SWALL:GSPL_AERHY (SWALL:P45789) (389 aa) fasta scores: E(): 8.8e-27%2C 31.4 38d in 363 aa%2Cand to Erwinia carotovora general secretion pathway protein L OutL SWALL:GSPL_ERWCA (SWALL:P31708) (425 aa) fasta scores: E(): 2.4e-12%2C 25.7 38d in 393 aa;gbkey=CDS;gene=yst1L;inference=similar to sequence:UniProtKB:P45789;product=putative general secretion pathway protein L;protein_id=CAL13598.1;transl_table=11
AM286415.1	EMBL	gene	3888265	3888759	.	+	.	ID=gene3528;Name=yst1M;gbkey=Gene;gene=yst1M;gene_biotype=protein_coding;locus_tag=YE3573
AM286415.1	EMBL	CDS	3888265	3888759	.	+	0	ID=cds3429;Parent=gene3528;Dbxref=EnsemblGenomes-Gn:YE3573,EnsemblGenomes-Tr:CAL13599,GOA:A1JQE2,InterPro:IPR007690,InterPro:IPR023229,UniProtKB/TrEMBL:A1JQE2,NCBI_GP:CAL13599.1;Name=CAL13599.1;Note=Similar to Erwinia carotovora general secretion pathway protein M OutM SWALL:GSPM_ERWCA (SWALL:P31709) (164 aa) fasta scores: E(): 2.5e-05%2C 26.54 38d in 162 aa%2Cand to Klebsiella pneumoniae general secretion pathway protein M PulM SWALL:GSPM_KLEPN (SWALL:P15752) (161 aa) fasta scores: E(): 2.9e-06%2C 26.62 38d in 154 aa;gbkey=CDS;gene=yst1M;inference=similar to sequence:UniProtKB:P31709;product=putative general secretion pathway protein M;protein_id=CAL13599.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3888313	3888381	.	+	.	ID=id6215;Note=1 probable transmembrane helix predicted for YE3573 by TMHMM2.0 at aa 17-39;gbkey=misc_feature;gene=yst1M;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3888768	3889553	.	+	.	ID=gene3529;Name=yst1O;gbkey=Gene;gene=yst1O;gene_biotype=protein_coding;locus_tag=YE3574
AM286415.1	EMBL	CDS	3888768	3889553	.	+	0	ID=cds3430;Parent=gene3529;Dbxref=EnsemblGenomes-Gn:YE3574,EnsemblGenomes-Tr:CAL13600,GOA:A1JQE3,InterPro:IPR000045,InterPro:IPR010627,InterPro:IPR014032,UniProtKB/TrEMBL:A1JQE3,NCBI_GP:CAL13600.1;Name=CAL13600.1;Note=Similar to Erwinia carotovora type 4 prepilin-like proteins leader peptide processing enzyme OutO SWALL:LEP4_ERWCA (SWALL:P31712) (279 aa) fasta scores: E(): 9.2e-41%2C 54.86 38d in 257 aa%2C and to Aeromonas salmonicida type 4 prepilin-like proteins leader peptide processing enzyme [includes: leader peptidase%3B N-methyltransferase] TapD or PilD SWALL:LEP4_AERSA (SWALL:O68964) (291 aa) fasta scores: E(): 6.6e-48%2C 53.78 id in 264 aa;gbkey=CDS;gene=yst1O;inference=similar to sequence:UniProtKB:P31712;product=type 4 prepilin-like proteins leader peptide processing enzyme;protein_id=CAL13600.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3888768	3889550	.	+	.	ID=id6216;Note=Pfam match to entry PF01478 Peptidase_C20%2C Type IV leader peptidase family%2C score 413.8%2C E-value 1e-121;gbkey=misc_feature;gene=yst1O;inference=protein motif:PFAM:PF01478
AM286415.1	EMBL	sequence_feature	3888786	3888854	.	+	.	ID=id6217;Note=6 probable transmembrane helices predicted for YE3574 by TMHMM2.0 at aa 7-29%2C 100-122%2C 135-154%2C 164-186%2C207-229 and 239-256;gbkey=misc_feature;gene=yst1O;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	3889065	3889133	.	+	.	ID=id6217;Note=6 probable transmembrane helices predicted for YE3574 by TMHMM2.0 at aa 7-29%2C 100-122%2C 135-154%2C 164-186%2C207-229 and 239-256;gbkey=misc_feature;gene=yst1O;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	3889170	3889229	.	+	.	ID=id6217;Note=6 probable transmembrane helices predicted for YE3574 by TMHMM2.0 at aa 7-29%2C 100-122%2C 135-154%2C 164-186%2C207-229 and 239-256;gbkey=misc_feature;gene=yst1O;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	3889257	3889325	.	+	.	ID=id6217;Note=6 probable transmembrane helices predicted for YE3574 by TMHMM2.0 at aa 7-29%2C 100-122%2C 135-154%2C 164-186%2C207-229 and 239-256;gbkey=misc_feature;gene=yst1O;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	3889386	3889454	.	+	.	ID=id6217;Note=6 probable transmembrane helices predicted for YE3574 by TMHMM2.0 at aa 7-29%2C 100-122%2C 135-154%2C 164-186%2C207-229 and 239-256;gbkey=misc_feature;gene=yst1O;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	3889482	3889535	.	+	.	ID=id6217;Note=6 probable transmembrane helices predicted for YE3574 by TMHMM2.0 at aa 7-29%2C 100-122%2C 135-154%2C 164-186%2C207-229 and 239-256;gbkey=misc_feature;gene=yst1O;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	3889575	3889976	.	-	.	ID=gene3530;Name=yst1S;gbkey=Gene;gene=yst1S;gene_biotype=protein_coding;locus_tag=YE3575
AM286415.1	EMBL	CDS	3889575	3889976	.	-	0	ID=cds3431;Parent=gene3530;Dbxref=EnsemblGenomes-Gn:YE3575,EnsemblGenomes-Tr:CAL13601,InterPro:IPR019114,UniProtKB/TrEMBL:A1JQE5,NCBI_GP:CAL13601.1;Name=CAL13601.1;Note=Similar to Erwinia chrysanthemi OutS protein precursor SWALL:OUTS_ERWCH (SWALL:Q01567) (133 aa) fasta scores: E(): 2.7e-07%2C 34.16 38d in 120 aa%2C and to Klebsiella pneumoniae pullulanase secretion protein PulS SWALL:PULS_KLEPN (SWALL:P20440) (125 aa) fasta scores: E(): 1e-07%2C 31.09 38d in 119 aa;gbkey=CDS;gene=yst1S;inference=similar to sequence:UniProtKB:Q01567;product=putative secretion protein;protein_id=CAL13601.1;transl_table=11
AM286415.1	EMBL	gene	3890393	3891877	.	+	.	ID=gene3531;Name=ChiY;gbkey=Gene;gene=ChiY;gene_biotype=protein_coding;locus_tag=YE3576
AM286415.1	EMBL	CDS	3890393	3891877	.	+	0	ID=cds3432;Parent=gene3531;Dbxref=EnsemblGenomes-Gn:YE3576,EnsemblGenomes-Tr:CAL13602,GOA:A1JQE6,InterPro:IPR003610,InterPro:IPR004302,InterPro:IPR014756,InterPro:IPR020879,NCBI_GP:CAL13602.1;Name=CAL13602.1;Note=Similar to Vibrio cholerae putative chitinase VCA0811 SWALL:Q9KLD5 (EMBL:AE004409) (485 aa) fasta scores: E(): 6.4e-53%2C 36.94 38d in 498 aa. N-terminus is similar to the N-terminal region of Serratia marcescens chitinase precursor SWALL:Q59930 (EMBL:L38484) (227 aa) fasta scores: E(): 6.4e-14%2C 34.87 38d in 195 aa;gbkey=CDS;gene=ChiY;inference=similar to sequence:INSDC:L38484;product=putative chitin binding protein;protein_id=CAL13602.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3890411	3890989	.	+	.	ID=id6218;Note=Pfam match to entry PF03067 Chitin_bind_3%2C Chitin binding domain%2C score 154.3%2C E-value 1.4e-43;gbkey=misc_feature;gene=ChiY;inference=protein motif:PFAM:PF03067
AM286415.1	EMBL	sequence_feature	3891569	3891592	.	+	.	ID=id6219;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=ChiY;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3891695	3891844	.	+	.	ID=id6220;Note=Pfam match to entry PF02839 CBM_5_12%2C Carbohydrate binding domain%2C score 21.6%2C E-value 0.00011;gbkey=misc_feature;gene=ChiY;inference=protein motif:PFAM:PF02839
AM286415.1	EMBL	gene	3892116	3893495	.	+	.	ID=gene3532;Name=YE3577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3577
AM286415.1	EMBL	CDS	3892116	3893495	.	+	0	ID=cds3433;Parent=gene3532;Dbxref=EnsemblGenomes-Gn:YE3577,EnsemblGenomes-Tr:CAL13603,UniProtKB/TrEMBL:A1JQF3,NCBI_GP:CAL13603.1;Name=CAL13603.1;Note=Similar to the C-terminal region of Streptomyces coelicolor putative integral membrane protein SCO0987 or SCBAC19F3.14 SWALL:Q93J57 (EMBL:AL596102) (517 aa) fasta scores: E(): 3.4e-53%2C 38.71 38d in 465 aa. Full length CDS is weakly similar to Bacillus halodurans hypothetical protein BH1854 SWALL:Q9KBS1 (EMBL:AP001513) (445 aa) fasta scores: E(): 3.8e-14%2C 25.49 38d in 451 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP001513;product=putative exported protein;protein_id=CAL13603.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3892152	3893285	.	+	.	ID=id6221;Note=Pfam match to entry PF03929 DUF337%2C Uncharacterized iron-regulated membrane protein (DUF337)%2C score 60.0%2CE-value 3.3e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF03929
AM286415.1	EMBL	sequence_feature	3892596	3892649	.	+	.	ID=id6222;Note=5 probable transmembrane helices predicted for YE3577 by TMHMM2.0 at aa 21-43%2C 161-178%2C 198-220%2C 364-386 and 417-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3892707	3892775	.	+	.	ID=id6222;Note=5 probable transmembrane helices predicted for YE3577 by TMHMM2.0 at aa 21-43%2C 161-178%2C 198-220%2C 364-386 and 417-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3893205	3893273	.	+	.	ID=id6222;Note=5 probable transmembrane helices predicted for YE3577 by TMHMM2.0 at aa 21-43%2C 161-178%2C 198-220%2C 364-386 and 417-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3893364	3893432	.	+	.	ID=id6222;Note=5 probable transmembrane helices predicted for YE3577 by TMHMM2.0 at aa 21-43%2C 161-178%2C 198-220%2C 364-386 and 417-439;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	3893711	3894415	.	+	.	ID=gene3533;Name=YE3578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3578
AM286415.1	EMBL	CDS	3893711	3894415	.	+	0	ID=cds3434;Parent=gene3533;Dbxref=EnsemblGenomes-Gn:YE3578,EnsemblGenomes-Tr:CAL13604,GOA:A1JQF5,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JQF5,NCBI_GP:CAL13604.1;Name=CAL13604.1;Note=Two-component regulatory system family%2C response regulator protein. C-terminal region is similar to Escherichia coli%2C and Escherichia coli O157:H7 fimbriae Z protein FimZ SWALL:FIMZ_ECOLI (SWALL:P21502) (210 aa) fasta scores: E(): 2.9e-10%2C 31.69 38d in 183 aa. Full length CDS is similar to Yersinia enterocolitica LuxR/UhpA family transcriptional regulator YsrR SWALL:Q9KKI8 (EMBL:AF005744) (236 aa) fasta scores: E(): 1.5e-72%2C80.93 38d in 236 aa. Similar to YE3560%2C 81.356 0dentity (82.05138ngapped) in 236 aa overlap;gbkey=CDS;inference=similar to sequence:UniProtKB:P21502;product=response regulator protein;protein_id=CAL13604.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3893729	3894172	.	+	.	ID=id6223;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 35.0%2C E-value 1.1e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	3894224	3894412	.	+	.	ID=id6224;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 48.5%2C E-value 9.6e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	gene	3894393	3896750	.	+	.	ID=gene3534;Name=YE3579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3579
AM286415.1	EMBL	CDS	3894393	3896750	.	+	0	ID=cds3435;Parent=gene3534;Dbxref=EnsemblGenomes-Gn:YE3579,EnsemblGenomes-Tr:CAL13605,GOA:A1JQF6,InterPro:IPR001638,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,InterPro:IPR011006,UniProtKB/TrEMBL:A1JQF6,NCBI_GP:CAL13605.1;Name=CAL13605.1;Note=Two-component regulatory system family%2C sensor kinase protein. Similar to Yersinia enterocolitica putative sensory transduction histidine kinase YsrS SWALL:Q9KKI7 (EMBL:AF005744) (791 aa) fasta scores: E(): 0%2C 87 38d in 785 aa. Similar to YE3561%2C 87.134 0dentity (87.35638ngapped) in 785 aa overlap;gbkey=CDS;inference=similar to sequence:INSDC:AF005744;product=sensor kinase protein;protein_id=CAL13605.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3895215	3895274	.	+	.	ID=id6225;Note=probable transmembrane helices predicted for YE3579 by TMHMM2.0 at and 275-294;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3895314	3895511	.	+	.	ID=id6226;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 25.0%2C E-value 8e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	3895653	3896009	.	+	.	ID=id6227;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 103.2%2C E-value 3.4e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	3896376	3896747	.	+	.	ID=id6228;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 75.8%2C E-value 5.9e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	pseudogene	3897044	3897183	.	-	.	ID=gene3535;Name=YE3580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE3580;pseudo=true
AM286415.1	EMBL	CDS	3897175	3897183	.	-	0	ID=cds3436;Parent=gene3535;Note=Probable gene remnant. Similar to the N-terminal region of Yersinia pestis transposase SWALL:O68779 (EMBL:AF053947) (402 aa) fasta scores: E(): 6.5e-13%2C91.48 38d in 47 aa%2C and to the full length Yersinia pestis hypothetical protein SWALL:O68700 (EMBL:AF053946) (55 aa) fasta scores: E(): 5e-14%2C 88 38d in 50 aa. Contains a frameshift after codon 3;gbkey=CDS;inference=similar to sequence:INSDC:AF053947;product=putative IS285-like transposase (partial);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3897044	3897175	.	-	0	ID=cds3436;Parent=gene3535;Note=Probable gene remnant. Similar to the N-terminal region of Yersinia pestis transposase SWALL:O68779 (EMBL:AF053947) (402 aa) fasta scores: E(): 6.5e-13%2C91.48 38d in 47 aa%2C and to the full length Yersinia pestis hypothetical protein SWALL:O68700 (EMBL:AF053946) (55 aa) fasta scores: E(): 5e-14%2C 88 38d in 50 aa. Contains a frameshift after codon 3;gbkey=CDS;inference=similar to sequence:INSDC:AF053947;product=putative IS285-like transposase (partial);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	3897562	3897828	.	+	.	ID=gene3536;Name=YE3581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3581
AM286415.1	EMBL	CDS	3897562	3897828	.	+	0	ID=cds3437;Parent=gene3536;Dbxref=EnsemblGenomes-Gn:YE3581,EnsemblGenomes-Tr:CAL13607,InterPro:IPR021831,UniProtKB/TrEMBL:A1JQF8,NCBI_GP:CAL13607.1;Name=CAL13607.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13607.1;transl_table=11
AM286415.1	EMBL	gene	3897825	3898610	.	+	.	ID=gene3537;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=YE3582
AM286415.1	EMBL	CDS	3897825	3898610	.	+	0	ID=cds3438;Parent=gene3537;Dbxref=EnsemblGenomes-Gn:YE3582,EnsemblGenomes-Tr:CAL13608,GOA:A1JQF9,InterPro:IPR000994,InterPro:IPR001714,InterPro:IPR002467,UniProtKB/TrEMBL:A1JQF9,NCBI_GP:CAL13608.1;Name=CAL13608.1;gbkey=CDS;gene=map;product=methionine aminopeptidase;protein_id=CAL13608.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3897837	3898562	.	+	.	ID=id6229;Note=Pfam match to entry PF00557 Peptidase_M24%2Cmetallopeptidase family M24%2C score 259.2%2C E-value 3.6e-75;gbkey=misc_feature;gene=map;inference=protein motif:PFAM:PF00557
AM286415.1	EMBL	sequence_feature	3898326	3898382	.	+	.	ID=id6230;Note=PS00680 Methionine aminopeptidase subfamily 1 signature.;gbkey=misc_feature;gene=map;inference=protein motif:Prosite:PS00680
AM286415.1	EMBL	sequence_feature	3898702	3902455	.	-	.	ID=id6231;Note=iron transport locus%2C In Y. pestis and Y. pseudotuberculosis;gbkey=misc_feature
AM286415.1	EMBL	gene	3898753	3899511	.	-	.	ID=gene3538;Name=YE3583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3583
AM286415.1	EMBL	CDS	3898753	3899511	.	-	0	ID=cds3439;Parent=gene3538;Dbxref=EnsemblGenomes-Gn:YE3583,EnsemblGenomes-Tr:CAL13609,GOA:A1JQG1,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQG1,NCBI_GP:CAL13609.1;Name=CAL13609.1;gbkey=CDS;product=putative iron ABC transporter%2C ATP-binding protein;protein_id=CAL13609.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3898876	3899433	.	-	.	ID=id6232;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 171.3%2C E-value 1e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3899389	3899412	.	-	.	ID=id6233;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3899508	3900515	.	-	.	ID=gene3539;Name=YE3584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3584
AM286415.1	EMBL	CDS	3899508	3900515	.	-	0	ID=cds3440;Parent=gene3539;Dbxref=EnsemblGenomes-Gn:YE3584,EnsemblGenomes-Tr:CAL13610,GOA:A1JQG2,InterPro:IPR000522,InterPro:IPR029022,UniProtKB/TrEMBL:A1JQG2,NCBI_GP:CAL13610.1;Name=CAL13610.1;gbkey=CDS;product=putative iron transport permease;protein_id=CAL13610.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3899523	3900425	.	-	.	ID=id6234;Note=Pfam match to entry PF01032 FecCD%2C FecCD transport family%2C score 16.2%2C E-value 6.3e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF01032
AM286415.1	EMBL	sequence_feature	3900384	3900437	.	-	.	ID=id6235;Note=9 probable transmembrane helices predicted for YE3584 by TMHMM2.0 at aa 27-44%2C 59-81%2C 86-108%2C 123-145%2C152-174%2C 194-213%2C 245-267%2C 282-304 and 311-330;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3900273	3900341	.	-	.	ID=id6235;Note=9 probable transmembrane helices predicted for YE3584 by TMHMM2.0 at aa 27-44%2C 59-81%2C 86-108%2C 123-145%2C152-174%2C 194-213%2C 245-267%2C 282-304 and 311-330;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3900192	3900260	.	-	.	ID=id6235;Note=9 probable transmembrane helices predicted for YE3584 by TMHMM2.0 at aa 27-44%2C 59-81%2C 86-108%2C 123-145%2C152-174%2C 194-213%2C 245-267%2C 282-304 and 311-330;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3900081	3900149	.	-	.	ID=id6235;Note=9 probable transmembrane helices predicted for YE3584 by TMHMM2.0 at aa 27-44%2C 59-81%2C 86-108%2C 123-145%2C152-174%2C 194-213%2C 245-267%2C 282-304 and 311-330;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3899994	3900062	.	-	.	ID=id6235;Note=9 probable transmembrane helices predicted for YE3584 by TMHMM2.0 at aa 27-44%2C 59-81%2C 86-108%2C 123-145%2C152-174%2C 194-213%2C 245-267%2C 282-304 and 311-330;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3899877	3899936	.	-	.	ID=id6235;Note=9 probable transmembrane helices predicted for YE3584 by TMHMM2.0 at aa 27-44%2C 59-81%2C 86-108%2C 123-145%2C152-174%2C 194-213%2C 245-267%2C 282-304 and 311-330;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3899715	3899783	.	-	.	ID=id6235;Note=9 probable transmembrane helices predicted for YE3584 by TMHMM2.0 at aa 27-44%2C 59-81%2C 86-108%2C 123-145%2C152-174%2C 194-213%2C 245-267%2C 282-304 and 311-330;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3899604	3899672	.	-	.	ID=id6235;Note=9 probable transmembrane helices predicted for YE3584 by TMHMM2.0 at aa 27-44%2C 59-81%2C 86-108%2C 123-145%2C152-174%2C 194-213%2C 245-267%2C 282-304 and 311-330;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3899526	3899585	.	-	.	ID=id6235;Note=9 probable transmembrane helices predicted for YE3584 by TMHMM2.0 at aa 27-44%2C 59-81%2C 86-108%2C 123-145%2C152-174%2C 194-213%2C 245-267%2C 282-304 and 311-330;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	3900505	3901464	.	-	.	ID=gene3540;Name=YE3585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3585
AM286415.1	EMBL	CDS	3900505	3901464	.	-	0	ID=cds3441;Parent=gene3540;Dbxref=EnsemblGenomes-Gn:YE3585,EnsemblGenomes-Tr:CAL13611,GOA:A1JQG3,InterPro:IPR000522,InterPro:IPR029022,UniProtKB/TrEMBL:A1JQG3,NCBI_GP:CAL13611.1;Name=CAL13611.1;gbkey=CDS;product=putative iron transport permease;protein_id=CAL13611.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3900526	3901395	.	-	.	ID=id6236;Note=Pfam match to entry PF01032 FecCD%2C FecCD transport family%2C score 173.1%2C E-value 2.9e-49;gbkey=misc_feature;inference=protein motif:PFAM:PF01032
AM286415.1	EMBL	sequence_feature	3901378	3901446	.	-	.	ID=id6237;Note=9 probable transmembrane helices predicted for YE3585 by TMHMM2.0 at aa 7-29%2C 49-71%2C 76-98%2C 108-127%2C134-156%2C 176-198%2C 228-250%2C 265-287 and 294-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	3901252	3901320	.	-	.	ID=id6237;Note=9 probable transmembrane helices predicted for YE3585 by TMHMM2.0 at aa 7-29%2C 49-71%2C 76-98%2C 108-127%2C134-156%2C 176-198%2C 228-250%2C 265-287 and 294-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	3901171	3901239	.	-	.	ID=id6237;Note=9 probable transmembrane helices predicted for YE3585 by TMHMM2.0 at aa 7-29%2C 49-71%2C 76-98%2C 108-127%2C134-156%2C 176-198%2C 228-250%2C 265-287 and 294-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	3901084	3901143	.	-	.	ID=id6237;Note=9 probable transmembrane helices predicted for YE3585 by TMHMM2.0 at aa 7-29%2C 49-71%2C 76-98%2C 108-127%2C134-156%2C 176-198%2C 228-250%2C 265-287 and 294-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	3900997	3901065	.	-	.	ID=id6237;Note=9 probable transmembrane helices predicted for YE3585 by TMHMM2.0 at aa 7-29%2C 49-71%2C 76-98%2C 108-127%2C134-156%2C 176-198%2C 228-250%2C 265-287 and 294-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	3900871	3900939	.	-	.	ID=id6237;Note=9 probable transmembrane helices predicted for YE3585 by TMHMM2.0 at aa 7-29%2C 49-71%2C 76-98%2C 108-127%2C134-156%2C 176-198%2C 228-250%2C 265-287 and 294-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	3900715	3900783	.	-	.	ID=id6237;Note=9 probable transmembrane helices predicted for YE3585 by TMHMM2.0 at aa 7-29%2C 49-71%2C 76-98%2C 108-127%2C134-156%2C 176-198%2C 228-250%2C 265-287 and 294-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	3900604	3900672	.	-	.	ID=id6237;Note=9 probable transmembrane helices predicted for YE3585 by TMHMM2.0 at aa 7-29%2C 49-71%2C 76-98%2C 108-127%2C134-156%2C 176-198%2C 228-250%2C 265-287 and 294-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	3900529	3900585	.	-	.	ID=id6237;Note=9 probable transmembrane helices predicted for YE3585 by TMHMM2.0 at aa 7-29%2C 49-71%2C 76-98%2C 108-127%2C134-156%2C 176-198%2C 228-250%2C 265-287 and 294-312;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	3901474	3902427	.	-	.	ID=gene3541;Name=YE3586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3586
AM286415.1	EMBL	CDS	3901474	3902427	.	-	0	ID=cds3442;Parent=gene3541;Dbxref=EnsemblGenomes-Gn:YE3586,EnsemblGenomes-Tr:CAL13612,InterPro:IPR002491,UniProtKB/TrEMBL:A1JQH3,NCBI_GP:CAL13612.1;Name=CAL13612.1;gbkey=CDS;product=putative iron transport protein;protein_id=CAL13612.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3901561	3902283	.	-	.	ID=id6238;Note=Pfam match to entry PF01497 Peripla_BP_2%2CPeriplasmic binding protein%2C score 177.3%2C E-value 1.6e-50;gbkey=misc_feature;inference=protein motif:PFAM:PF01497
AM286415.1	EMBL	sequence_feature	3902365	3902397	.	-	.	ID=id6239;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3902746	3903213	.	-	.	ID=gene3542;Name=YE3587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3587
AM286415.1	EMBL	CDS	3902746	3903213	.	-	0	ID=cds3443;Parent=gene3542;Dbxref=EnsemblGenomes-Gn:YE3587,EnsemblGenomes-Tr:CAL13613,GOA:A1JQH4,InterPro:IPR001077,InterPro:IPR029063,UniProtKB/TrEMBL:A1JQH4,NCBI_GP:CAL13613.1;Name=CAL13613.1;Note=Possible pseudogene. Similar to internal regions of Streptomyces lipmanii O-demethylpuromycin-o-methyltransferase DmpM SWALL:DMPM_STRLP (SWALL:P42712) (376 aa) fasta scores: E(): 4.4e-11%2C 37.25 38d in 153 aa%2C and Streptomyces avermitilis O-methyltransferase SWALL:Q93HA8 (EMBL:AB070947) (359 aa) fasta scores: E(): 5.4e-08%2C31.78 38d in 151 aa. Similar to an internal region of YE1418%2C 62.252 38dentity (62.2520ngapped) in 151 aa overlap;gbkey=CDS;inference=similar to sequence:UniProtKB:P42712;product=putative O-methyltransferase;protein_id=CAL13613.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3902755	3903156	.	-	.	ID=id6240;Note=Pfam match to entry PF00891 Methyltransf_2%2CO-methyltransferase%2C score 47.5%2C E-value 1.1e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00891
AM286415.1	EMBL	gene	3903486	3904889	.	+	.	ID=gene3543;Name=YE3588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3588
AM286415.1	EMBL	CDS	3903486	3904889	.	+	0	ID=cds3444;Parent=gene3543;Dbxref=EnsemblGenomes-Gn:YE3588,EnsemblGenomes-Tr:CAL13614,GOA:A1JQH5,InterPro:IPR005828,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JQH5,NCBI_GP:CAL13614.1;Name=CAL13614.1;Note=Similar to the N-terminal region of Escherichia coli%2C and Escherichia coli O157:H7 proline/betaine transporter ProP SWALL:PROP_ECOLI (SWALL:P30848) (500 aa) fasta scores: E(): 8e-45%2C 34.72 38d in 432 aa%2C and to the full length Campylobacter jejuni putative transmembrane transport protein CJ0339 SWALL:Q9PIG1 (EMBL:AL139074) (453 aa) fasta scores: E(): 5.8e-128%2C 72.38 38d in 449 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P30848;product=putative transporter protein;protein_id=CAL13614.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3903594	3903662	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3903705	3903773	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3903807	3903875	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3903903	3903971	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3904008	3904076	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3904104	3904163	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3904302	3904370	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3904413	3904478	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3904497	3904565	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3904578	3904646	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3904707	3904766	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3904776	3904844	.	+	.	ID=id6241;Note=12 probable transmembrane helices predicted for YE3588 by TMHMM2.0 at aa 37-59%2C 74-96%2C 108-130%2C 140-162%2C175-197%2C 207-226%2C 273-295%2C 310-331%2C 338-360%2C 365-387%2C408-427 and 431-453;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3903609	3904883	.	+	.	ID=id6242;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 108.4%2C E-value 9e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	3905083	3906102	.	+	.	ID=gene3544;Name=YE3589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3589
AM286415.1	EMBL	CDS	3905083	3906102	.	+	0	ID=cds3445;Parent=gene3544;Dbxref=EnsemblGenomes-Gn:YE3589,EnsemblGenomes-Tr:CAL13615,GOA:A1JQH7,InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JQH7,NCBI_GP:CAL13615.1;Name=CAL13615.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 ribose operon repressor RbsR SWALL:RBSR_ECOLI (SWALL:P25551) (329 aa) fasta scores: E(): 8.6e-31%2C 35.35 id in 314 aa%2C and to Streptomyces coelicolor hypothetical transcriptional regulator SCO4158 or SCD84.25c SWALL:Y5F8_STRCO (SWALL:Q05954) (340 aa) fasta scores: E(): 1e-34%2C 37.24 38d in 341 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q05954;product=LacI family regulatory protein;protein_id=CAL13615.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3905281	3906075	.	+	.	ID=id6243;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 106.1%2C E-value 4.4e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	3906127	3907197	.	+	.	ID=gene3545;Name=YE3590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3590
AM286415.1	EMBL	CDS	3906127	3907197	.	+	0	ID=cds3446;Parent=gene3545;Dbxref=EnsemblGenomes-Gn:YE3590,EnsemblGenomes-Tr:CAL13616,GOA:A1JQH9,InterPro:IPR001910,InterPro:IPR023186,UniProtKB/TrEMBL:A1JQH9,NCBI_GP:CAL13616.1;Name=CAL13616.1;Note=Similar to Crithidia fasciculata inosine-uridine preferring nucleoside hydrolase IunH SWALL:IUNH_CRIFA (SWALL:Q27546) (314 aa) fasta scores: E(): 7.7e-18%2C 31.02 id in 332 aa%2C and to Campylobacter jejuni putative nucleoside hydrolase CJ0340 SWALL:Q9PIG0 (EMBL:AL139074) (335 aa) fasta scores: E(): 1.4e-49%2C 45.2 38d in 323 aa. CDS is extended at the C-terminus in comparison to orthologues;gbkey=CDS;inference=similar to sequence:UniProtKB:Q27546;product=putative hydrolase;protein_id=CAL13616.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3906127	3907107	.	+	.	ID=id6244;Note=Pfam match to entry PF01156 IU_nuc_hydro%2CInosine-uridine preferring nucleoside hydrolase%2C score 149.1%2C E-value 5.2e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF01156
AM286415.1	EMBL	gene	3907361	3908980	.	+	.	ID=gene3546;Name=YE3591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3591
AM286415.1	EMBL	CDS	3907361	3908980	.	+	0	ID=cds3447;Parent=gene3546;Dbxref=EnsemblGenomes-Gn:YE3591,EnsemblGenomes-Tr:CAL13617,GOA:A1JQI0,InterPro:IPR003841,InterPro:IPR004633,InterPro:IPR026022,UniProtKB/TrEMBL:A1JQI0,NCBI_GP:CAL13617.1;Name=CAL13617.1;Note=Similar to Escherichia coli hypothetical protein YjbB or b4020 SWALL:YJBB_ECOLI (SWALL:P32683) (543 aa) fasta scores: E(): 6e-124%2C 64.55 38d in 536 aa%2C and to Salmonella typhi putative membrane protein STY4406 SWALL:Q8Z1V5 (EMBL:AL627282) (543 aa) fasta scores: E(): 1.6e-122%2C 65.22 38d in 532 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P32683;product=putative Na+/Pi-cotransporter;protein_id=CAL13617.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3907370	3907438	.	+	.	ID=id6245;Note=8 probable transmembrane helices predicted for YE3591 by TMHMM2.0 at aa 4-26%2C 67-89%2C 99-121%2C 134-156%2C171-193%2C 202-224%2C 239-261 and 274-296;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3907559	3907627	.	+	.	ID=id6245;Note=8 probable transmembrane helices predicted for YE3591 by TMHMM2.0 at aa 4-26%2C 67-89%2C 99-121%2C 134-156%2C171-193%2C 202-224%2C 239-261 and 274-296;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3907655	3907723	.	+	.	ID=id6245;Note=8 probable transmembrane helices predicted for YE3591 by TMHMM2.0 at aa 4-26%2C 67-89%2C 99-121%2C 134-156%2C171-193%2C 202-224%2C 239-261 and 274-296;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3907760	3907828	.	+	.	ID=id6245;Note=8 probable transmembrane helices predicted for YE3591 by TMHMM2.0 at aa 4-26%2C 67-89%2C 99-121%2C 134-156%2C171-193%2C 202-224%2C 239-261 and 274-296;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3907871	3907939	.	+	.	ID=id6245;Note=8 probable transmembrane helices predicted for YE3591 by TMHMM2.0 at aa 4-26%2C 67-89%2C 99-121%2C 134-156%2C171-193%2C 202-224%2C 239-261 and 274-296;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3907964	3908032	.	+	.	ID=id6245;Note=8 probable transmembrane helices predicted for YE3591 by TMHMM2.0 at aa 4-26%2C 67-89%2C 99-121%2C 134-156%2C171-193%2C 202-224%2C 239-261 and 274-296;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3908075	3908143	.	+	.	ID=id6245;Note=8 probable transmembrane helices predicted for YE3591 by TMHMM2.0 at aa 4-26%2C 67-89%2C 99-121%2C 134-156%2C171-193%2C 202-224%2C 239-261 and 274-296;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3908180	3908248	.	+	.	ID=id6245;Note=8 probable transmembrane helices predicted for YE3591 by TMHMM2.0 at aa 4-26%2C 67-89%2C 99-121%2C 134-156%2C171-193%2C 202-224%2C 239-261 and 274-296;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	3907421	3908629	.	+	.	ID=id6246;Note=Pfam match to entry PF02690 Na_Pi_cotrans%2CNa+/Pi-cotransporter%2C score 402.1%2C E-value 3.5e-118;gbkey=misc_feature;inference=protein motif:PFAM:PF02690
AM286415.1	EMBL	gene	3909060	3909587	.	-	.	ID=gene3547;Name=YE3592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3592
AM286415.1	EMBL	CDS	3909060	3909587	.	-	0	ID=cds3448;Parent=gene3547;Dbxref=EnsemblGenomes-Gn:YE3592,EnsemblGenomes-Tr:CAL13618,GOA:A1JQI2,InterPro:IPR000868,UniProtKB/TrEMBL:A1JQI2,NCBI_GP:CAL13618.1;Name=CAL13618.1;Note=Similar to Streptococcus pneumoniae isochorismatase family protein SP1745 SWALL:Q97P96 (EMBL:AE007467) (166 aa) fasta scores: E(): 1.7e-11%2C 33.33 38d in 150 aa%2C and to Clostridium acetobutylicum amidase from nicotinamidase family CAC3465 SWALL:Q97DL0 (EMBL:AE007844) (178 aa) fasta scores: E(): 2.4e-09%2C 26.92 38d in 156 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE007844;product=isochorismatase family protein;protein_id=CAL13618.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3909117	3909581	.	-	.	ID=id6247;Note=Pfam match to entry PF00857 Isochorismatase%2CIsochorismatase family%2C score 14.9%2C E-value 2e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00857
AM286415.1	EMBL	gene	3909765	3910331	.	-	.	ID=gene3548;Name=YE3593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3593
AM286415.1	EMBL	CDS	3909765	3910331	.	-	0	ID=cds3449;Parent=gene3548;Dbxref=EnsemblGenomes-Gn:YE3593,EnsemblGenomes-Tr:CAL13619,UniProtKB/TrEMBL:A1JQI3,NCBI_GP:CAL13619.1;Name=CAL13619.1;Note=Similar to Yersinia pestis putative exported protein YPO1003 SWALL:Q8ZHA2 (EMBL:AJ414145) (195 aa) fasta scores: E(): 2.6e-49%2C 71.79 38d in 195 aa%2C and to Salmonella typhi putative exported protein STY4152 SWALL:Q8Z2B0 (EMBL:AL627281) (179 aa) fasta scores: E(): 5.1e-40%2C 63.12 38d in 160 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627281;product=putative exported protein;protein_id=CAL13619.1;transl_table=11
AM286415.1	EMBL	gene	3910509	3912011	.	-	.	ID=gene3549;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=YE3594
AM286415.1	EMBL	CDS	3910509	3912011	.	-	0	ID=cds3450;Parent=gene3549;Dbxref=EnsemblGenomes-Gn:YE3594,EnsemblGenomes-Tr:CAL13620,GOA:A1JQI4,InterPro:IPR004736,InterPro:IPR005828,InterPro:IPR005829,InterPro:IPR015041,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JQI4,NCBI_GP:CAL13620.1;Name=CAL13620.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 proline/betaine transporter ProP SWALL:PROP_ECOLI (SWALL:P30848) (500 aa) fasta scores: E(): 2.6e-155%2C79.51 38d in 498 aa%2C and to Salmonella typhimurium proline/betaine transporter STM4290 SWALL:PROP_SALTY (SWALL:P40862) (500 aa) fasta scores: E(): 6.7e-156%2C80.12 38d in 498 aa;gbkey=CDS;gene=proP;inference=similar to sequence:UniProtKB:P40862;product=proline/betaine transporter;protein_id=CAL13620.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3910650	3911936	.	-	.	ID=id6248;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score 315.1%2C E-value 5.4e-92;gbkey=misc_feature;gene=proP;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	3911853	3911921	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3911742	3911810	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3911649	3911717	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3911580	3911639	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3911454	3911522	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3911358	3911411	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3911163	3911231	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3911052	3911120	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3910971	3911033	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3910890	3910958	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3910785	3910853	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3910698	3910757	.	-	.	ID=id6249;Note=12 probable transmembrane helices predicted for YE3594 by TMHMM2.0 at aa 49-71%2C 86-108%2C 117-139%2C 143-162%2C182-204%2C 219-236%2C 279-301%2C 316-338%2C 345-365%2C 370-392%2C405-427 and 437-456;gbkey=misc_feature;gene=proP;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3911013	3911066	.	-	.	ID=id6250;Note=PS00216 Sugar transport proteins signature 1.;gbkey=misc_feature;gene=proP;inference=protein motif:Prosite:PS00216
AM286415.1	EMBL	gene	3912249	3915374	.	-	.	ID=gene3550;Name=YE3595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3595
AM286415.1	EMBL	CDS	3912249	3915374	.	-	0	ID=cds3451;Parent=gene3550;Dbxref=EnsemblGenomes-Gn:YE3595,EnsemblGenomes-Tr:CAL13621,GOA:A1JQI6,InterPro:IPR000731,InterPro:IPR001036,InterPro:IPR004764,InterPro:IPR027463,UniProtKB/TrEMBL:A1JQI6,NCBI_GP:CAL13621.1;Name=CAL13621.1;gbkey=CDS;product=putative integral membrane efflux protein;protein_id=CAL13621.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3912309	3915374	.	-	.	ID=id6251;Note=Pfam match to entry PF00873 ACR_tran%2CAcrB/AcrD/AcrF family%2C score 1315.6%2C E-value 0;gbkey=misc_feature;inference=protein motif:PFAM:PF00873
AM286415.1	EMBL	sequence_feature	3915279	3915338	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3914295	3914354	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3914208	3914276	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3914130	3914198	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3913989	3914057	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3913878	3913946	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3913716	3913784	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3912720	3912788	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3912633	3912701	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3912552	3912620	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3912408	3912476	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3912312	3912380	.	-	.	ID=id6252;Note=12 probable transmembrane helices predicted for YE3595 by TMHMM2.0 at aa 13-32%2C 341-360%2C 367-389%2C 393-415%2C440-462%2C 477-499%2C 531-553%2C 863-885%2C 892-914%2C 919-941%2C967-989 and 999-1021;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	3915387	3916589	.	-	.	ID=gene3551;Name=YE3596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3596
AM286415.1	EMBL	CDS	3915387	3916589	.	-	0	ID=cds3452;Parent=gene3551;Dbxref=EnsemblGenomes-Gn:YE3596,EnsemblGenomes-Tr:CAL13622,GOA:A1JQI8,InterPro:IPR006143,UniProtKB/TrEMBL:A1JQI8,NCBI_GP:CAL13622.1;Name=CAL13622.1;gbkey=CDS;product=putative drug efflux protein;protein_id=CAL13622.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3915459	3916367	.	-	.	ID=id6253;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 74.4%2C E-value 1.5e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	gene	3917096	3919594	.	+	.	ID=gene3552;Name=YE3597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3597
AM286415.1	EMBL	CDS	3917096	3919594	.	+	0	ID=cds3453;Parent=gene3552;Dbxref=EnsemblGenomes-Gn:YE3597,EnsemblGenomes-Tr:CAL13623,GOA:A1JQI9,InterPro:IPR000014,InterPro:IPR000160,InterPro:IPR001610,InterPro:IPR001633,InterPro:IPR007892,InterPro:IPR013767,InterPro:IPR029787,UniProtKB/TrEMBL:A1JQI9,NCBI_GP:CAL13623.1;Name=CAL13623.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13623.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3917105	3917173	.	+	.	ID=id6254;Note=2 probable transmembrane helices predicted for YE3597 by TMHMM2.0 at aa 4-26 and 239-261;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	3917810	3917878	.	+	.	ID=id6254;Note=2 probable transmembrane helices predicted for YE3597 by TMHMM2.0 at aa 4-26 and 239-261;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	3917945	3918139	.	+	.	ID=id6255;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 32.1%2C E-value 8.2e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	3918302	3918787	.	+	.	ID=id6256;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 219.4%2C E-value 3.5e-63;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	3918827	3919555	.	+	.	ID=id6257;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score 391.2%2C E-value 6.7e-115;gbkey=misc_feature;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	gene	3919673	3920344	.	-	.	ID=gene3553;Name=YE3598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3598
AM286415.1	EMBL	CDS	3919673	3920344	.	-	0	ID=cds3454;Parent=gene3553;Dbxref=EnsemblGenomes-Gn:YE3598,EnsemblGenomes-Tr:CAL13624,InterPro:IPR021747,UniProtKB/TrEMBL:A1JQJ1,NCBI_GP:CAL13624.1;Name=CAL13624.1;Note=Similar to Salmonella typhimurium putative outer membrane lipoprotein STM1607 SWALL:Q8ZPC4 (EMBL:AE008770) (222 aa) fasta scores: E(): 3.1e-32%2C 43.19 38d in 213 aa%2Cand to Escherichia coli%2C and Escherichia coli O157:H7 hypothetical lipoprotein YdcL SWALL:YDCL_ECOLI (SWALL:P76101) (222 aa) fasta scores: E(): 2.4e-31%2C 42.45 id in 212 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P76101;product=putative exported protein;protein_id=CAL13624.1;transl_table=11
AM286415.1	EMBL	gene	3920539	3921321	.	-	.	ID=gene3554;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=YE3599
AM286415.1	EMBL	CDS	3920539	3921321	.	-	0	ID=cds3455;Parent=gene3554;Dbxref=EnsemblGenomes-Gn:YE3599,EnsemblGenomes-Tr:CAL13625,GOA:A1JQJ2,InterPro:IPR000417,InterPro:IPR029056,NCBI_GP:CAL13625.1;Name=CAL13625.1;Note=Similar to Bacillus subtilis hydroxyethylthiazole kinase ThiM or ThiK SWALL:THIM_BACSU (SWALL:P39593) (272 aa) fasta scores: E(): 3.7e-29%2C 41.83 38d in 251 aa%2C and to Salmonella typhimurium hydroxyethylthiazole kinase ThiM or STM2147 SWALL:THIM_SALTY (SWALL:P55883) (265 aa) fasta scores: E(): 2.8e-55%2C 59.84 38d in 254 aa;gbkey=CDS;gene=thiM;inference=similar to sequence:UniProtKB:P55883;product=hydroxyethylthiazole kinase;protein_id=CAL13625.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3920548	3921282	.	-	.	ID=id6258;Note=Pfam match to entry PF02110 HK%2CHydroxyethylthiazole kinase family%2C score 384.0%2C E-value 1e-112;gbkey=misc_feature;gene=thiM;inference=protein motif:PFAM:PF02110
AM286415.1	EMBL	gene	3921409	3923685	.	-	.	ID=gene3555;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;gene_synonym=hydA;locus_tag=YE3600
AM286415.1	EMBL	CDS	3921409	3923685	.	-	0	ID=cds3456;Parent=gene3555;Dbxref=EnsemblGenomes-Gn:YE3600,EnsemblGenomes-Tr:CAL13626,GOA:A1JQJ3,InterPro:IPR001792,InterPro:IPR004421,InterPro:IPR006070,InterPro:IPR011125,InterPro:IPR017945,InterPro:IPR017968,UniProtKB/TrEMBL:A1JQJ3,NCBI_GP:CAL13626.1;Name=CAL13626.1;Note=Similar to Escherichia coli hydrogenase maturation protein HypF or HydA SWALL:HYPF_ECOLI (SWALL:P30131) (750 aa) fasta scores: E(): 1.1e-114%2C 62.54 38d in 761 aa%2C and to Salmonella typhi hydrogenase maturation protein STY2964 SWALL:Q8Z4C3 (EMBL:AL627276) (746 aa) fasta scores: E(): 7.6e-116%2C 62.64 38d in 755 aa;gbkey=CDS;gene=hypF;inference=similar to sequence:UniProtKB:P30131;product=hydrogenase maturation protein;protein_id=CAL13626.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3922528	3923061	.	-	.	ID=id6259;Note=Pfam match to entry PF01300 Sua5_yciO_yrdC%2C yrdC domain%2C score 203.9%2C E-value 1.6e-58;gbkey=misc_feature;gene=hypF;inference=protein motif:PFAM:PF01300
AM286415.1	EMBL	sequence_feature	3923419	3923682	.	-	.	ID=id6260;Note=Pfam match to entry PF00708 Acylphosphatase%2CAcylphosphatase%2C score 20.2%2C E-value 1.4e-06;gbkey=misc_feature;gene=hypF;inference=protein motif:PFAM:PF00708
AM286415.1	EMBL	sequence_feature	3923626	3923658	.	-	.	ID=id6261;Note=PS00150 Acylphosphatase signature 1.;gbkey=misc_feature;gene=hypF;inference=protein motif:Prosite:PS00150
AM286415.1	EMBL	gene	3923972	3924940	.	-	.	ID=gene3556;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=YE3601
AM286415.1	EMBL	CDS	3923972	3924940	.	-	0	ID=cds3457;Parent=gene3556;Dbxref=EnsemblGenomes-Gn:YE3601,EnsemblGenomes-Tr:CAL13627,GOA:A1JQJ5,InterPro:IPR000728,InterPro:IPR010918,InterPro:IPR011854,InterPro:IPR016188,UniProtKB/TrEMBL:A1JQJ5,NCBI_GP:CAL13627.1;Name=CAL13627.1;Note=Similar to Escherichia coli hydrogenase isoenzymes formation protein HypE SWALL:HYPE_ECOLI (SWALL:P24193) (322 aa) fasta scores: E(): 4.5e-90%2C 72.98 38d in 322 aa%2Cand to Salmonella typhi hydrogenase isoenzymes formation protein STY2980 SWALL:Q8Z4B3 (EMBL:AL627276) (322 aa) fasta scores: E(): 2.2e-90%2C 73.29 38d in 322 aa;gbkey=CDS;gene=hypE;inference=similar to sequence:UniProtKB:P24193;product=hydrogenase isoenzymes formation protein;protein_id=CAL13627.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3924038	3924490	.	-	.	ID=id6262;Note=Pfam match to entry PF02769 AIRS_C%2C AIR synthase related protein%2C C-terminal domain%2C score 133.7%2C E-value 2.2e-37;gbkey=misc_feature;gene=hypE;inference=protein motif:PFAM:PF02769
AM286415.1	EMBL	sequence_feature	3924521	3924967	.	-	.	ID=id6263;Note=Pfam match to entry PF00586 AIRS%2C AIR synthase related protein%2C N-terminal domain%2C score 166.2%2C E-value 3.7e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF00586
AM286415.1	EMBL	gene	3925089	3926192	.	-	.	ID=gene3557;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=YE3602
AM286415.1	EMBL	CDS	3925089	3926192	.	-	0	ID=cds3458;Parent=gene3557;Dbxref=EnsemblGenomes-Gn:YE3602,EnsemblGenomes-Tr:CAL13628,GOA:A1JQJ7,InterPro:IPR002780,UniProtKB/TrEMBL:A1JQJ7,NCBI_GP:CAL13628.1;Name=CAL13628.1;Note=Similar to Escherichia coli hydrogenase isoenzymes formation protein HypD SWALL:HYPD_ECOLI (SWALL:P24192) (373 aa) fasta scores: E(): 1.9e-106%2C 68.66 38d in 367 aa%2Cand to Salmonella typhi hydrogenase isoenzymes formation protein STY2979 SWALL:Q8Z4B4 (EMBL:AL627276) (373 aa) fasta scores: E(): 1.4e-106%2C 69.18 38d in 370 aa;gbkey=CDS;gene=hypD;inference=similar to sequence:UniProtKB:P24192;product=hydrogenase isoenzymes formation protein;protein_id=CAL13628.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3925092	3926168	.	-	.	ID=id6264;Note=Pfam match to entry PF01924 HypD%2C Hydrogenase formation hypA family%2C score 729.3%2C E-value 1.1e-216;gbkey=misc_feature;gene=hypD;inference=protein motif:PFAM:PF01924
AM286415.1	EMBL	gene	3926179	3926463	.	-	.	ID=gene3558;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=YE3602A
AM286415.1	EMBL	CDS	3926179	3926463	.	-	0	ID=cds3459;Parent=gene3558;Dbxref=EnsemblGenomes-Gn:YE3602A,EnsemblGenomes-Tr:CAL13629,InterPro:IPR001109,InterPro:IPR019812,UniProtKB/TrEMBL:A1JQJ8,NCBI_GP:CAL13629.1;Name=CAL13629.1;gbkey=CDS;gene=hybG;product=hydrogenase-2 operon protein;protein_id=CAL13629.1;transl_table=11
AM286415.1	EMBL	gene	3926454	3927554	.	-	.	ID=gene3559;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=YE3603
AM286415.1	EMBL	CDS	3926454	3927554	.	-	0	ID=cds3460;Parent=gene3559;Dbxref=EnsemblGenomes-Gn:YE3603,EnsemblGenomes-Tr:CAL13630,GOA:A1JQJ9,InterPro:IPR003495,InterPro:IPR004392,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQJ9,NCBI_GP:CAL13630.1;Name=CAL13630.1;Note=C-terminal region is similar to Escherichia coli hydrogenase isoenzymes nickel incorporation protein HypB SWALL:HYPB_ECOLI (SWALL:P24190) (290 aa) fasta scores: E(): 4.4e-63%2C 65.6 38d in 282 aa%2C Full length CDS is similar to Azotobacter chroococcum Mcd 1 hydrogenase nickel incorporation protein HypB or HupB SWALL:HYPB_AZOCH (SWALL:Q43949) (305 aa) fasta scores: E(): 5.5e-54%2C 51.36 id in 366 aa. CDS contain an internal region with additional amino acids relative to orthologues%2C residues 19 to 130. Contained within this region is a histidine rich domain%2C residues 20 to 52. Effect on the function of CDS is not known. Possible pseudogene;gbkey=CDS;gene=hypB;inference=similar to sequence:UniProtKB:Q43949;product=hydrogenase isoenzymes nickel incorporation protein;protein_id=CAL13630.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3926664	3927047	.	-	.	ID=id6265;Note=Pfam match to entry PF01495 HypB_UreG%2C HypB/UreG nucleotide-binding domain%2C score 273.8%2C E-value 1.4e-79;gbkey=misc_feature;gene=hypB;inference=protein motif:PFAM:PF01495
AM286415.1	EMBL	gene	3927575	3927916	.	-	.	ID=gene3560;Name=hybF;gbkey=Gene;gene=hybF;gene_biotype=protein_coding;locus_tag=YE3603a
AM286415.1	EMBL	CDS	3927575	3927916	.	-	0	ID=cds3461;Parent=gene3560;Dbxref=EnsemblGenomes-Gn:YE3603a,EnsemblGenomes-Tr:CAL13631,GOA:A1JQK1,InterPro:IPR000688,InterPro:IPR020538,UniProtKB/TrEMBL:A1JQK1,NCBI_GP:CAL13631.1;Name=CAL13631.1;Note=Similar to Escherichia coli probable hydrogenase nickel incorporation protein HybF SWALL:HYBF_ECOLI (SWALL:P37184) (113 aa) fasta scores: E(): 4e-26%2C 57.52 id in 113 aa%2C and to Salmonella typhimurium%2C and Salmonella typhi putative hydrogenase expression/formation protein STM3144 or STY3315 SWALL:Q8XEP6 (EMBL:AE008844) (113 aa) fasta scores: E(): 4.5e-28%2C 59.29 38d in 113 aa;gbkey=CDS;gene=hybF;inference=similar to sequence:UniProtKB:P37184;product=hydrogenase expression/formation protein;protein_id=CAL13631.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3927766	3934056	.	-	.	ID=id6266;Note=hydrogenase-2 biosynthetic operon;gbkey=misc_feature
AM286415.1	EMBL	gene	3927909	3928427	.	-	.	ID=gene3561;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=YE3604
AM286415.1	EMBL	CDS	3927909	3928427	.	-	0	ID=cds3462;Parent=gene3561;Dbxref=EnsemblGenomes-Gn:YE3604,EnsemblGenomes-Tr:CAL13632,InterPro:IPR023994,UniProtKB/TrEMBL:A1JQK2,NCBI_GP:CAL13632.1;Name=CAL13632.1;Note=Similar to Escherichia coli hydrogenase-2 operon protein HybE SWALL:HYBE_ECOLI (SWALL:P37183) (162 aa) fasta scores: E(): 3.2e-22%2C 43.03 38d in 165 aa%2C and to Salmonella typhimurium putative hydrogenase STM3145 SWALL:Q8ZM18 (EMBL:AE008844) (162 aa) fasta scores: E(): 4.8e-24%2C 44.84 38d in 165 aa;gbkey=CDS;gene=hybE;inference=similar to sequence:UniProtKB:P37183;product=hydrogenase-2 operon protein;protein_id=CAL13632.1;transl_table=11
AM286415.1	EMBL	gene	3928420	3928911	.	-	.	ID=gene3562;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=YE3605
AM286415.1	EMBL	CDS	3928420	3928911	.	-	0	ID=cds3463;Parent=gene3562;Dbxref=EnsemblGenomes-Gn:YE3605,EnsemblGenomes-Tr:CAL13633,GOA:A1JQK3,InterPro:IPR000671,InterPro:IPR004419,InterPro:IPR023430,UniProtKB/TrEMBL:A1JQK3,NCBI_GP:CAL13633.1;Name=CAL13633.1;Note=Similar to Escherichia coli hydrogenase 2 maturation protease HybD SWALL:HYBD_ECOLI (SWALL:P37182) (164 aa) fasta scores: E(): 1.6e-38%2C 63.8 38d in 163 aa%2Cand to Salmonella typhimurium putative processing element for hydrogenase-2 STM3146 SWALL:Q8ZM17 (EMBL:AE008844) (164 aa) fasta scores: E(): 8.6e-39%2C 63.41 38d in 164 aa;gbkey=CDS;gene=hybD;inference=similar to sequence:UniProtKB:P37182;product=hydrogenase 2 maturation protease;protein_id=CAL13633.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3928471	3928854	.	-	.	ID=id6267;Note=Pfam match to entry PF01750 HycI%2C Hydrogenase maturation protease%2C score 148.8%2C E-value 6.4e-42;gbkey=misc_feature;gene=hybD;inference=protein motif:PFAM:PF01750
AM286415.1	EMBL	gene	3928911	3930605	.	-	.	ID=gene3563;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=YE3606
AM286415.1	EMBL	CDS	3928911	3930605	.	-	0	ID=cds3464;Parent=gene3563;Dbxref=EnsemblGenomes-Gn:YE3606,EnsemblGenomes-Tr:CAL13634,GOA:A1JQK4,InterPro:IPR001501,InterPro:IPR018194,InterPro:IPR029014,UniProtKB/TrEMBL:A1JQK4,NCBI_GP:CAL13634.1;Name=CAL13634.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 hydrogenase-2 large chain precursor HybC SWALL:MBHM_ECOLI (SWALL:P37181) (566 aa) fasta scores: E(): 2.7e-178%2C 74.91 38d in 566 aa%2C and to Salmonella typhimurium hydrogenase-2%2C large subunit STM3147 SWALL:Q8ZM16 (EMBL:AE008844) (567 aa) fasta scores: E(): 4.1e-179%2C 74.6 38d in 567 aa;gbkey=CDS;gene=hybC;inference=similar to sequence:UniProtKB:P37181;product=hydrogenase-2 large chain precursor;protein_id=CAL13634.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3928959	3930491	.	-	.	ID=id6268;Note=Pfam match to entry PF00374 NiFeSe_Hases%2CNickel-dependent hydrogenase%2C score 902.7%2C E-value 7e-269;gbkey=misc_feature;gene=hybC;inference=protein motif:PFAM:PF00374
AM286415.1	EMBL	sequence_feature	3928959	3928988	.	-	.	ID=id6269;Note=PS00508 Nickel-dependent hydrogenases large subunit signature 2.;gbkey=misc_feature;gene=hybC;inference=protein motif:Prosite:PS00508
AM286415.1	EMBL	sequence_feature	3929493	3929516	.	-	.	ID=id6270;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=hybC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3930414	3930491	.	-	.	ID=id6271;Note=PS00507 Nickel-dependent hydrogenases large subunit signature 1.;gbkey=misc_feature;gene=hybC;inference=protein motif:Prosite:PS00507
AM286415.1	EMBL	gene	3930583	3931776	.	-	.	ID=gene3564;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=YE3607
AM286415.1	EMBL	CDS	3930583	3931776	.	-	0	ID=cds3465;Parent=gene3564;Dbxref=EnsemblGenomes-Gn:YE3607,EnsemblGenomes-Tr:CAL13635,UniProtKB/TrEMBL:A1JQK5,NCBI_GP:CAL13635.1;Name=CAL13635.1;Note=Similar to Escherichia coli probable Ni/Fe-hydrogenase 2 b-type cytochrome subunit HybB SWALL:HYBB_ECOLI (SWALL:P37180) (392 aa) fasta scores: E(): 2.6e-120%2C 73.79 38d in 393 aa%2C and to Salmonella typhimurium putative cytochrome Ni/Fe component of hydrogenase-2 STM3148 SWALL:Q8ZM15 (EMBL:AE008844) (392 aa) fasta scores: E(): 2e-120%2C 73.53 38d in 393 aa;gbkey=CDS;gene=hybB;inference=similar to sequence:UniProtKB:P37180;product=Ni/Fe-hydrogenase 2 b-type cytochrome subunit;protein_id=CAL13635.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3931684	3931743	.	-	.	ID=id6272;Note=10 probable transmembrane helices predicted for YE3607 by TMHMM2.0 at aa 12-31%2C 51-73%2C 85-107%2C 129-151%2C172-194%2C 209-231%2C 244-263%2C 283-300%2C 312-331 and 351-373;gbkey=misc_feature;gene=hybB;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	3931558	3931626	.	-	.	ID=id6272;Note=10 probable transmembrane helices predicted for YE3607 by TMHMM2.0 at aa 12-31%2C 51-73%2C 85-107%2C 129-151%2C172-194%2C 209-231%2C 244-263%2C 283-300%2C 312-331 and 351-373;gbkey=misc_feature;gene=hybB;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	3931456	3931524	.	-	.	ID=id6272;Note=10 probable transmembrane helices predicted for YE3607 by TMHMM2.0 at aa 12-31%2C 51-73%2C 85-107%2C 129-151%2C172-194%2C 209-231%2C 244-263%2C 283-300%2C 312-331 and 351-373;gbkey=misc_feature;gene=hybB;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	3931324	3931392	.	-	.	ID=id6272;Note=10 probable transmembrane helices predicted for YE3607 by TMHMM2.0 at aa 12-31%2C 51-73%2C 85-107%2C 129-151%2C172-194%2C 209-231%2C 244-263%2C 283-300%2C 312-331 and 351-373;gbkey=misc_feature;gene=hybB;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	3931195	3931263	.	-	.	ID=id6272;Note=10 probable transmembrane helices predicted for YE3607 by TMHMM2.0 at aa 12-31%2C 51-73%2C 85-107%2C 129-151%2C172-194%2C 209-231%2C 244-263%2C 283-300%2C 312-331 and 351-373;gbkey=misc_feature;gene=hybB;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	3931084	3931152	.	-	.	ID=id6272;Note=10 probable transmembrane helices predicted for YE3607 by TMHMM2.0 at aa 12-31%2C 51-73%2C 85-107%2C 129-151%2C172-194%2C 209-231%2C 244-263%2C 283-300%2C 312-331 and 351-373;gbkey=misc_feature;gene=hybB;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	3930988	3931047	.	-	.	ID=id6272;Note=10 probable transmembrane helices predicted for YE3607 by TMHMM2.0 at aa 12-31%2C 51-73%2C 85-107%2C 129-151%2C172-194%2C 209-231%2C 244-263%2C 283-300%2C 312-331 and 351-373;gbkey=misc_feature;gene=hybB;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	3930877	3930930	.	-	.	ID=id6272;Note=10 probable transmembrane helices predicted for YE3607 by TMHMM2.0 at aa 12-31%2C 51-73%2C 85-107%2C 129-151%2C172-194%2C 209-231%2C 244-263%2C 283-300%2C 312-331 and 351-373;gbkey=misc_feature;gene=hybB;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	3930784	3930843	.	-	.	ID=id6272;Note=10 probable transmembrane helices predicted for YE3607 by TMHMM2.0 at aa 12-31%2C 51-73%2C 85-107%2C 129-151%2C172-194%2C 209-231%2C 244-263%2C 283-300%2C 312-331 and 351-373;gbkey=misc_feature;gene=hybB;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3930658	3930726	.	-	.	ID=id6272;Note=10 probable transmembrane helices predicted for YE3607 by TMHMM2.0 at aa 12-31%2C 51-73%2C 85-107%2C 129-151%2C172-194%2C 209-231%2C 244-263%2C 283-300%2C 312-331 and 351-373;gbkey=misc_feature;gene=hybB;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	3930787	3931665	.	-	.	ID=id6273;Note=Pfam match to entry PF03916 NrfD%2C Polysulphide reductase%2C NrfD%2C score -49.9%2C E-value 1.6e-05;gbkey=misc_feature;gene=hybB;inference=protein motif:PFAM:PF03916
AM286415.1	EMBL	gene	3931769	3932797	.	-	.	ID=gene3565;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=YE3608
AM286415.1	EMBL	CDS	3931769	3932797	.	-	0	ID=cds3466;Parent=gene3565;Dbxref=EnsemblGenomes-Gn:YE3608,EnsemblGenomes-Tr:CAL13636,GOA:A1JQK6,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JQK6,NCBI_GP:CAL13636.1;Name=CAL13636.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 hydrogenase-2 operon protein HybA SWALL:HYBA_ECOLI (SWALL:P37179) (328 aa) fasta scores: E(): 9.8e-100%2C72.05 38d in 340 aa%2C and to Salmonella typhimurium%2C and Salmonella typhi hypothetical protein STM3149 or STY3320 SWALL:Q8XH15 (EMBL:AE008844) (328 aa) fasta scores: E(): 9.8e-100%2C 72.05 38d in 340 aa. In E. coli intitally thought to be hydrogenase-2 small subunit which now is identified as HybO;gbkey=CDS;gene=hybA;inference=similar to sequence:UniProtKB:P37179;product=hydrogenase-2 operon protein;protein_id=CAL13636.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3932300	3932371	.	-	.	ID=id6274;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 28.0%2C E-value 7.4e-06;gbkey=misc_feature;gene=hybA;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	3932315	3932350	.	-	.	ID=id6275;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=hybA;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	sequence_feature	3932612	3932683	.	-	.	ID=id6276;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 9.4%2C E-value 0.0058;gbkey=misc_feature;gene=hybA;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	gene	3932800	3933915	.	-	.	ID=gene3566;Name=hyb0;gbkey=Gene;gene=hyb0;gene_biotype=protein_coding;locus_tag=YE3609
AM286415.1	EMBL	CDS	3932800	3933915	.	-	0	ID=cds3467;Parent=gene3566;Dbxref=EnsemblGenomes-Gn:YE3609,EnsemblGenomes-Tr:CAL13637,GOA:A1JQL6,InterPro:IPR001821,InterPro:IPR006137,InterPro:IPR006311,InterPro:IPR019546,InterPro:IPR027394,UniProtKB/TrEMBL:A1JQL6,NCBI_GP:CAL13637.1;Name=CAL13637.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 hydrogenase-2 small chain precursor Hyb0 SWALL:MBHT_ECOLI (SWALL:Q46847) (372 aa) fasta scores: E(): 6.9e-123%2C 80.59 38d in 371 aa%2C and to Salmonella typhimurium%2C and Salmonella typhi putative Ni/Fe hydrogenases%2C small subunit STM3150 or hyb0 or STY3321 SWALL:Q8XGL3 (EMBL:AE008844) (372 aa) fasta scores: E(): 1.1e-122%2C 80.86 38d in 371 aa;gbkey=CDS;gene=hyb0;inference=similar to sequence:UniProtKB:Q46847;product=hydrogenase-2 small chain precursor;protein_id=CAL13637.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3932866	3932934	.	-	.	ID=id6277;Note=1 probable transmembrane helix predicted for YE3609 by TMHMM2.0 at aa 328-350;gbkey=misc_feature;gene=hyb0;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3933316	3933621	.	-	.	ID=id6278;Note=Pfam match to entry PF01058 oxidored_q6%2C NADH ubiquinone oxidoreductase%2C 20 Kd subunit%2C score -1.3%2CE-value 3e-05;gbkey=misc_feature;gene=hyb0;inference=protein motif:PFAM:PF01058
AM286415.1	EMBL	sequence_feature	3933463	3933495	.	-	.	ID=id6279;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hyb0;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3934620	3935087	.	+	.	ID=gene3567;Name=pcpY2;gbkey=Gene;gene=pcpY2;gene_biotype=protein_coding;locus_tag=YE3610
AM286415.1	EMBL	CDS	3934620	3935087	.	+	0	ID=cds3468;Parent=gene3567;Dbxref=EnsemblGenomes-Gn:YE3610,EnsemblGenomes-Tr:CAL13638,GOA:A1JQL8,InterPro:IPR008816,UniProtKB/TrEMBL:A1JQL8,NCBI_GP:CAL13638.1;Name=CAL13638.1;Note=Similar to Yersinia enterocolitica outer membrane lipoprotein precursor Pcp or PcpY SWALL:PCP_YEREN (SWALL:P31484) (155 aa) fasta scores: E(): 1.9e-34%2C 72.9 id in 155 aa%2C and to Escherichia coli%2C and Escherichia coli O157:H7 outer membrane lipoprotein precursor SlyB SWALL:SLYB_ECOLI (SWALL:P55741) (155 aa) fasta scores: E(): 1.1e-30%2C 63.22 38d in 155 aa. Similar to YE2143%2C72.903 38dentity (72.9030ngapped) in 155 aa overlap%2C and to YE3819%2C 66.667 38dentity (67.0970ngapped) in 156 aa overlap;gbkey=CDS;gene=pcpY2;inference=similar to sequence:UniProtKB:P55741;product=outer membrane lipoprotein;protein_id=CAL13638.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3934641	3934673	.	+	.	ID=id6280;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pcpY2;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3935004	3938881	.	-	.	ID=id6281;Note=This is the remnants of a flagella operon that is intact in YpsTB;gbkey=misc_feature
AM286415.1	EMBL	pseudogene	3935364	3935432	.	-	.	ID=gene3568;Name=YE3610A;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3610A;part=1/3;pseudo=true
AM286415.1	EMBL	pseudogene	3935199	3935360	.	-	.	ID=gene3568;Name=YE3610A;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3610A;part=2/3;pseudo=true
AM286415.1	EMBL	pseudogene	3935004	3935195	.	-	.	ID=gene3568;Name=YE3610A;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3610A;part=3/3;pseudo=true
AM286415.1	EMBL	CDS	3935364	3935432	.	-	0	ID=cds3469;Parent=gene3568;Note=Similar to Yersinia pestis putative flagellar biogenesis protein ypo0744 SWALL:Q8ZHY0 (EMBL:AJ414144) (156 aa) fasta scores: E(): 8.1e-12%2C 37.24 38d in 145 aa. Note carries and inframe stop codon following codon 23 and 77. The CDS also appears to be truncated at the C-termini.;gbkey=CDS;inference=similar to sequence:INSDC:AJ414144;product=putative flagellar biogenesis protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3935199	3935360	.	-	0	ID=cds3469;Parent=gene3568;Note=Similar to Yersinia pestis putative flagellar biogenesis protein ypo0744 SWALL:Q8ZHY0 (EMBL:AJ414144) (156 aa) fasta scores: E(): 8.1e-12%2C 37.24 38d in 145 aa. Note carries and inframe stop codon following codon 23 and 77. The CDS also appears to be truncated at the C-termini.;gbkey=CDS;inference=similar to sequence:INSDC:AJ414144;product=putative flagellar biogenesis protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3935004	3935195	.	-	0	ID=cds3469;Parent=gene3568;Note=Similar to Yersinia pestis putative flagellar biogenesis protein ypo0744 SWALL:Q8ZHY0 (EMBL:AJ414144) (156 aa) fasta scores: E(): 8.1e-12%2C 37.24 38d in 145 aa. Note carries and inframe stop codon following codon 23 and 77. The CDS also appears to be truncated at the C-termini.;gbkey=CDS;inference=similar to sequence:INSDC:AJ414144;product=putative flagellar biogenesis protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	pseudogene	3935715	3936476	.	+	.	ID=gene3569;Name=YE3611;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE3611;pseudo=true
AM286415.1	EMBL	CDS	3935715	3936476	.	+	0	ID=cds3470;Parent=gene3569;Note=N-terminus is similar to the N-terminal region of Vibrio cholerae cholera toxin transcriptional activator ToxR SWALL:TOXR_VIBCH (SWALL:P15795) (294 aa) fasta scores: E(): 0.00015%2C 26.27 38d in 236 aa%2C and to Yersinia pestis putative regulatory protein YPO0736 SWALL:Q8ZHY8 (EMBL:AJ414144) (348 aa) fasta scores: E(): 8.9e-31%2C44.48 38d in 263 aa. CDS is probably truncated by the insertion of the downstream IS element and subsequent recombination events;gbkey=CDS;inference=similar to sequence:UniProtKB:P15795;product=putative flagella operon transcriptional activator (partial);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	3935841	3936056	.	+	.	ID=id6282;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 42.8%2C E-value 5e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	sequence_feature	3936294	3936353	.	+	.	ID=id6283;Note=1 probable transmembrane helix predicted for YE3611 by TMHMM2.0 at aa 243-262;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	repeat_region	3936497	3937444	.	-	.	ID=id6284;Note=IS1330. This element carries many point mutations%2Cdeletions etc;gbkey=repeat_region
AM286415.1	EMBL	pseudogene	3937199	3937354	.	-	.	ID=gene3570;Name=tpn1330;gbkey=Gene;gene=tpn1330;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3612;part=1/3;pseudo=true
AM286415.1	EMBL	pseudogene	3936894	3937195	.	-	.	ID=gene3570;Name=tpn1330;gbkey=Gene;gene=tpn1330;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3612;part=2/3;pseudo=true
AM286415.1	EMBL	pseudogene	3936522	3936891	.	-	.	ID=gene3570;Name=tpn1330;gbkey=Gene;gene=tpn1330;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3612;part=3/3;pseudo=true
AM286415.1	EMBL	CDS	3937199	3937354	.	-	0	ID=cds3471;Parent=gene3570;Dbxref=PSEUDO:CAL13641.1;Note=This is a highly degenerate copy of the previously sequenced: Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:Q8RSF5 (EMBL:AJ344215) (397 aa) fasta scores: E(): 2.9e-20%2C 51.37 38d in 399 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3937097	3937195	.	-	0	ID=cds3471;Parent=gene3570;Dbxref=PSEUDO:CAL13641.1;Note=This is a highly degenerate copy of the previously sequenced: Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:Q8RSF5 (EMBL:AJ344215) (397 aa) fasta scores: E(): 2.9e-20%2C 51.37 38d in 399 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3936894	3937101	.	-	0	ID=cds3471;Parent=gene3570;Dbxref=PSEUDO:CAL13641.1;Note=This is a highly degenerate copy of the previously sequenced: Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:Q8RSF5 (EMBL:AJ344215) (397 aa) fasta scores: E(): 2.9e-20%2C 51.37 38d in 399 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3936770	3936891	.	-	2	ID=cds3471;Parent=gene3570;Dbxref=PSEUDO:CAL13641.1;Note=This is a highly degenerate copy of the previously sequenced: Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:Q8RSF5 (EMBL:AJ344215) (397 aa) fasta scores: E(): 2.9e-20%2C 51.37 38d in 399 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3936522	3936770	.	-	0	ID=cds3471;Parent=gene3570;Dbxref=PSEUDO:CAL13641.1;Note=This is a highly degenerate copy of the previously sequenced: Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:Q8RSF5 (EMBL:AJ344215) (397 aa) fasta scores: E(): 2.9e-20%2C 51.37 38d in 399 aa;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	3937695	3938543	.	-	.	ID=gene3571;Name=YE3614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3614
AM286415.1	EMBL	CDS	3937695	3938543	.	-	0	ID=cds3472;Parent=gene3571;Dbxref=EnsemblGenomes-Gn:YE3614,EnsemblGenomes-Tr:CAL13642,GOA:A1JQM0,InterPro:IPR001087,InterPro:IPR013831,UniProtKB/TrEMBL:A1JQM0,NCBI_GP:CAL13642.1;Name=CAL13642.1;Note=C-terminal region is similar to the N-terminal region of Aeromonas hydrophila phosphatidylcholine-sterol acyltransferase precursor SWALL:GCAT_AERHY (SWALL:P10480) (335 aa) fasta scores: E(): 1.6e-15%2C 30.73 38d in 231 aa%2Cand an internal region of Salmonella typhimurium salmonella translocated effector: regulated by SPI-2 STM1631 SWALL:Q9FD10 (EMBL:AE008772) (408 aa) fasta scores: E(): 8.7e-29%2C 42.56 38d in 242 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P10480;product=putative lipase/acylhydrolase;protein_id=CAL13642.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3938022	3938354	.	-	.	ID=id6285;Note=Pfam match to entry PF00657 Lipase_GDSL%2CLipase/Acylhydrolase with GDSL-like motif%2C score 43.4%2CE-value 3.4e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00657
AM286415.1	EMBL	gene	3939448	3941022	.	-	.	ID=gene3572;Name=YE3615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3615
AM286415.1	EMBL	CDS	3939448	3941022	.	-	0	ID=cds3473;Parent=gene3572;Dbxref=EnsemblGenomes-Gn:YE3615,EnsemblGenomes-Tr:CAL13644,GOA:A1JQM1,InterPro:IPR003122,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,UniProtKB/TrEMBL:A1JQM1,NCBI_GP:CAL13644.1;Name=CAL13644.1;Note=Similar to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 8.2e-65%2C 47.4 id in 521 aa%2C and to Salmonella typhimurium putative methyl-accepting chemotaxis protein STM3152 SWALL:Q8ZM14 (EMBL:AE008845) (547 aa) fasta scores: E(): 1.7e-82%2C50.86 38d in 519 aa. Similar to YE2971%2C 60.421 0dentity (60.53638ngapped) in 523 aa overlap;gbkey=CDS;inference=similar to sequence:UniProtKB:P07017;product=putative methyl-accepting chemotaxis protein;protein_id=CAL13644.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3939469	3940167	.	-	.	ID=id6286;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 379.7%2C E-value 1.9e-111;gbkey=misc_feature;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	sequence_feature	3940228	3940437	.	-	.	ID=id6287;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 29.1%2C E-value 6.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	3940918	3940986	.	-	.	ID=id6288;Note=1 probable transmembrane helix predicted for YE3615 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3941617	3942600	.	-	.	ID=gene3573;Name=YE3616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3616
AM286415.1	EMBL	CDS	3941617	3942600	.	-	0	ID=cds3474;Parent=gene3573;Dbxref=EnsemblGenomes-Gn:YE3616,EnsemblGenomes-Tr:CAL13645,GOA:A1JQM3,InterPro:IPR001509,InterPro:IPR016040,UniProtKB/TrEMBL:A1JQM3,NCBI_GP:CAL13645.1;Name=CAL13645.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13645.1;transl_table=11
AM286415.1	EMBL	gene	3942627	3943937	.	-	.	ID=gene3574;Name=YE3617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3617
AM286415.1	EMBL	CDS	3942627	3943937	.	-	0	ID=cds3475;Parent=gene3574;Dbxref=EnsemblGenomes-Gn:YE3617,EnsemblGenomes-Tr:CAL13646,GOA:A1JQM4,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JQM4,NCBI_GP:CAL13646.1;Name=CAL13646.1;gbkey=CDS;product=putative membrane transport protein;protein_id=CAL13646.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3942639	3943868	.	-	.	ID=id6289;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -66.3%2C E-value 1.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	3943803	3943862	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3943677	3943745	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3943596	3943658	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3943515	3943583	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3943410	3943478	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3943314	3943382	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3943110	3943178	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3943014	3943082	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3942924	3942977	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3942846	3942914	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3942759	3942827	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3942648	3942716	.	-	.	ID=id6290;Note=12 probable transmembrane helices predicted for YE3617 by TMHMM2.0 at aa 26-45%2C 65-87%2C 94-114%2C 119-141%2C154-176%2C 186-208%2C 254-276%2C 286-308%2C 321-338%2C 342-364%2C371-393 and 408-430;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	3944550	3953082	.	-	.	ID=id6291;Note=iron uptake fes-fep operon;gbkey=misc_feature
AM286415.1	EMBL	gene	3944627	3945478	.	+	.	ID=gene3575;Name=fepB;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=YE3618
AM286415.1	EMBL	CDS	3944627	3945478	.	+	0	ID=cds3476;Parent=gene3575;Dbxref=EnsemblGenomes-Gn:YE3618,EnsemblGenomes-Tr:CAL13647,InterPro:IPR002491,UniProtKB/TrEMBL:A1JQM5,NCBI_GP:CAL13647.1;Name=CAL13647.1;gbkey=CDS;gene=fepB;product=Ferrienterobactin-periplasmic binding protein;protein_id=CAL13647.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3944645	3945406	.	+	.	ID=id6292;Note=Pfam match to entry PF01497 Peripla_BP_2%2CPeriplasmic binding protein%2C score 144.4%2C E-value 1.3e-40;gbkey=misc_feature;gene=fepB;inference=protein motif:PFAM:PF01497
AM286415.1	EMBL	gene	3945828	3946898	.	+	.	ID=gene3576;Name=fepD;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=YE3619
AM286415.1	EMBL	CDS	3945828	3946898	.	+	0	ID=cds3477;Parent=gene3576;Dbxref=EnsemblGenomes-Gn:YE3619,EnsemblGenomes-Tr:CAL13648,GOA:A1JQM6,InterPro:IPR000522,InterPro:IPR029022,UniProtKB/TrEMBL:A1JQM6,NCBI_GP:CAL13648.1;Name=CAL13648.1;Note=Similar to Escherichia coli ferric enterobactin transport system permease protein FepD SWALL:FEPD_ECOLI (SWALL:P23876) (334 aa) fasta scores: E(): 1.3e-63%2C 55.23 id in 315 aa. Highly similar to Yersinia enterocolitica putative permease FepD SWALL:Q9X3S1 (EMBL:AF082879) (355 aa) fasta scores: E(): 1.3e-124%2C 99.43 38d in 354 aa;gbkey=CDS;gene=fepD;inference=similar to sequence:UniProtKB:P23876;product=ferric enterobactin transport system permease protein;protein_id=CAL13648.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3946080	3946871	.	+	.	ID=id6293;Note=Pfam match to entry PF01032 FecCD%2C FecCD transport family%2C score 297.3%2C E-value 1.2e-86;gbkey=misc_feature;gene=fepD;inference=protein motif:PFAM:PF01032
AM286415.1	EMBL	sequence_feature	3946083	3946142	.	+	.	ID=id6294;Note=8 probable transmembrane helices predicted for YE3619 by TMHMM2.0 at aa 2-21%2C 31-53%2C 55-77%2C 87-109%2C130-152%2C 179-201%2C 208-230 and 245-262;gbkey=misc_feature;gene=fepD;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	3946170	3946238	.	+	.	ID=id6294;Note=8 probable transmembrane helices predicted for YE3619 by TMHMM2.0 at aa 2-21%2C 31-53%2C 55-77%2C 87-109%2C130-152%2C 179-201%2C 208-230 and 245-262;gbkey=misc_feature;gene=fepD;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	3946242	3946310	.	+	.	ID=id6294;Note=8 probable transmembrane helices predicted for YE3619 by TMHMM2.0 at aa 2-21%2C 31-53%2C 55-77%2C 87-109%2C130-152%2C 179-201%2C 208-230 and 245-262;gbkey=misc_feature;gene=fepD;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	3946338	3946406	.	+	.	ID=id6294;Note=8 probable transmembrane helices predicted for YE3619 by TMHMM2.0 at aa 2-21%2C 31-53%2C 55-77%2C 87-109%2C130-152%2C 179-201%2C 208-230 and 245-262;gbkey=misc_feature;gene=fepD;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	3946467	3946535	.	+	.	ID=id6294;Note=8 probable transmembrane helices predicted for YE3619 by TMHMM2.0 at aa 2-21%2C 31-53%2C 55-77%2C 87-109%2C130-152%2C 179-201%2C 208-230 and 245-262;gbkey=misc_feature;gene=fepD;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	3946614	3946682	.	+	.	ID=id6294;Note=8 probable transmembrane helices predicted for YE3619 by TMHMM2.0 at aa 2-21%2C 31-53%2C 55-77%2C 87-109%2C130-152%2C 179-201%2C 208-230 and 245-262;gbkey=misc_feature;gene=fepD;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	3946701	3946769	.	+	.	ID=id6294;Note=8 probable transmembrane helices predicted for YE3619 by TMHMM2.0 at aa 2-21%2C 31-53%2C 55-77%2C 87-109%2C130-152%2C 179-201%2C 208-230 and 245-262;gbkey=misc_feature;gene=fepD;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	3946812	3946865	.	+	.	ID=id6294;Note=8 probable transmembrane helices predicted for YE3619 by TMHMM2.0 at aa 2-21%2C 31-53%2C 55-77%2C 87-109%2C130-152%2C 179-201%2C 208-230 and 245-262;gbkey=misc_feature;gene=fepD;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	3946895	3947938	.	+	.	ID=gene3577;Name=fepG;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=YE3620
AM286415.1	EMBL	CDS	3946895	3947938	.	+	0	ID=cds3478;Parent=gene3577;Dbxref=EnsemblGenomes-Gn:YE3620,EnsemblGenomes-Tr:CAL13649,GOA:A1JQM7,InterPro:IPR000522,InterPro:IPR029022,UniProtKB/TrEMBL:A1JQM7,NCBI_GP:CAL13649.1;Name=CAL13649.1;gbkey=CDS;gene=fepG;product=iron-siderophore transport system%2C membrane permease component;protein_id=CAL13649.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3946973	3947041	.	+	.	ID=id6295;Note=10 probable transmembrane helices predicted for YE3620 by TMHMM2.0 at aa 27-49%2C 75-97%2C 110-128%2C 132-154%2C161-178%2C 182-204%2C 211-233%2C 253-275%2C 287-309 and 324-341;gbkey=misc_feature;gene=fepG;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	3947117	3947185	.	+	.	ID=id6295;Note=10 probable transmembrane helices predicted for YE3620 by TMHMM2.0 at aa 27-49%2C 75-97%2C 110-128%2C 132-154%2C161-178%2C 182-204%2C 211-233%2C 253-275%2C 287-309 and 324-341;gbkey=misc_feature;gene=fepG;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	3947222	3947278	.	+	.	ID=id6295;Note=10 probable transmembrane helices predicted for YE3620 by TMHMM2.0 at aa 27-49%2C 75-97%2C 110-128%2C 132-154%2C161-178%2C 182-204%2C 211-233%2C 253-275%2C 287-309 and 324-341;gbkey=misc_feature;gene=fepG;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	3947288	3947356	.	+	.	ID=id6295;Note=10 probable transmembrane helices predicted for YE3620 by TMHMM2.0 at aa 27-49%2C 75-97%2C 110-128%2C 132-154%2C161-178%2C 182-204%2C 211-233%2C 253-275%2C 287-309 and 324-341;gbkey=misc_feature;gene=fepG;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	3947375	3947428	.	+	.	ID=id6295;Note=10 probable transmembrane helices predicted for YE3620 by TMHMM2.0 at aa 27-49%2C 75-97%2C 110-128%2C 132-154%2C161-178%2C 182-204%2C 211-233%2C 253-275%2C 287-309 and 324-341;gbkey=misc_feature;gene=fepG;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	3947438	3947506	.	+	.	ID=id6295;Note=10 probable transmembrane helices predicted for YE3620 by TMHMM2.0 at aa 27-49%2C 75-97%2C 110-128%2C 132-154%2C161-178%2C 182-204%2C 211-233%2C 253-275%2C 287-309 and 324-341;gbkey=misc_feature;gene=fepG;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	3947525	3947593	.	+	.	ID=id6295;Note=10 probable transmembrane helices predicted for YE3620 by TMHMM2.0 at aa 27-49%2C 75-97%2C 110-128%2C 132-154%2C161-178%2C 182-204%2C 211-233%2C 253-275%2C 287-309 and 324-341;gbkey=misc_feature;gene=fepG;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	3947651	3947719	.	+	.	ID=id6295;Note=10 probable transmembrane helices predicted for YE3620 by TMHMM2.0 at aa 27-49%2C 75-97%2C 110-128%2C 132-154%2C161-178%2C 182-204%2C 211-233%2C 253-275%2C 287-309 and 324-341;gbkey=misc_feature;gene=fepG;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	3947753	3947821	.	+	.	ID=id6295;Note=10 probable transmembrane helices predicted for YE3620 by TMHMM2.0 at aa 27-49%2C 75-97%2C 110-128%2C 132-154%2C161-178%2C 182-204%2C 211-233%2C 253-275%2C 287-309 and 324-341;gbkey=misc_feature;gene=fepG;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	3947864	3947917	.	+	.	ID=id6295;Note=10 probable transmembrane helices predicted for YE3620 by TMHMM2.0 at aa 27-49%2C 75-97%2C 110-128%2C 132-154%2C161-178%2C 182-204%2C 211-233%2C 253-275%2C 287-309 and 324-341;gbkey=misc_feature;gene=fepG;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	3947033	3947920	.	+	.	ID=id6296;Note=Pfam match to entry PF01032 FecCD%2C FecCD transport family%2C score 356.4%2C E-value 1.9e-104;gbkey=misc_feature;gene=fepG;inference=protein motif:PFAM:PF01032
AM286415.1	EMBL	gene	3947905	3948753	.	+	.	ID=gene3578;Name=fepC;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=YE3621
AM286415.1	EMBL	CDS	3947905	3948753	.	+	0	ID=cds3479;Parent=gene3578;Dbxref=EnsemblGenomes-Gn:YE3621,EnsemblGenomes-Tr:CAL13650,GOA:A1JQM8,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQM8,NCBI_GP:CAL13650.1;Name=CAL13650.1;gbkey=CDS;gene=fepC;product=iron-siderophore transport system%2C ATP-binding component;protein_id=CAL13650.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3947905	3948078	.	+	.	ID=id6297;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;gene=fepC;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	sequence_feature	3948049	3948612	.	+	.	ID=id6298;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 181.6%2C E-value 8.3e-52;gbkey=misc_feature;gene=fepC;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	3948070	3948093	.	+	.	ID=id6299;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=fepC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3948382	3948426	.	+	.	ID=id6300;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=fepC;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	3948823	3950199	.	-	.	ID=gene3579;Name=fes;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=YE3622
AM286415.1	EMBL	CDS	3948823	3950199	.	-	0	ID=cds3480;Parent=gene3579;Dbxref=EnsemblGenomes-Gn:YE3622,EnsemblGenomes-Tr:CAL13651,GOA:A1JQM9,InterPro:IPR000801,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR021764,InterPro:IPR029058,UniProtKB/TrEMBL:A1JQM9,NCBI_GP:CAL13651.1;Name=CAL13651.1;Note=Similar to Erwinia chrysanthemi enterochelin esterase Fes SWALL:FES_ERWCH (SWALL:O51900) (434 aa) fasta scores: E(): 6.8e-75%2C 47.6 38d in 418 aa. Highly similar to Yersinia enterocolitica enterochelin esterase Fes SWALL:FES_YEREN (SWALL:Q56855) (353 aa) fasta scores: E(): 4.3e-128%2C 95.41 38d in 327 aa. This CDS differs from that previously sequenced in the very C-terminal region. Possible alternative translational start site at codon 8;gbkey=CDS;gene=fes;inference=similar to sequence:UniProtKB:Q56855;product=enterochelin esterase;protein_id=CAL13651.1;transl_table=11
AM286415.1	EMBL	gene	3950296	3950379	.	+	.	ID=gene3580;Name=YE3623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3623
AM286415.1	EMBL	CDS	3950296	3950379	.	+	0	ID=cds3481;Parent=gene3580;Dbxref=EnsemblGenomes-Gn:YE3623,EnsemblGenomes-Tr:CAL13652,UniProtKB/TrEMBL:A1JQN0,NCBI_GP:CAL13652.1;Name=CAL13652.1;Note=Doubtful CDS. Similar to the C-terminal region of Yersinia pestis hypothetical protein YPO0478 ypo0478 SWALL:Q8ZIL7 (EMBL:AJ414143) (54 aa) fasta scores: E(): 1.9e-07%2C 80.76 38d in 26 aa. Similar YE1774%2C 85.185 identity (85.18538ngapped) in 27 aa overlap%2C YE1164%2C85.185 38dentity (85.1850ngapped) in 27 aa overlap%2CYE4017%2C 81.481 38dentity (81.4810ngapped) in 27 aa overlap%2C YE0137%2C 81.481 38dentity (81.4810ngapped) in 27 aa overlap%2C YE0627%2C 77.778 38dentity%2C and to YE0496%2C74.074 38dentity (74.0740ngapped) in 27 aa overlap;gbkey=CDS;inference=similar to sequence:INSDC:AJ414143;product=hypothetical protein;protein_id=CAL13652.1;transl_table=11
AM286415.1	EMBL	pseudogene	3950648	3952799	.	+	.	ID=gene3581;Name=fepA;gbkey=Gene;gene=fepA;gene_biotype=pseudogene;locus_tag=YE3624;pseudo=true
AM286415.1	EMBL	CDS	3950648	3951835	.	+	0	ID=cds3482;Parent=gene3581;Dbxref=PSEUDO:CAL13653.1;Note=Similar to Erwinia chrysanthemi ferrichrysobactin receptor precursor Fct SWALL:FCT_ERWCH (SWALL:Q47162) (735 aa) fasta scores: E(): 6.2e-78%2C 51.97 38d in 708 aa%2C and to Salmonella typhimurium ferrioxamine B receptor precursor FoxA SWALL:FOXA_SALTY (SWALL:Q56145) (702 aa) fasta scores: E(): 1.4e-80%2C 35.39 38d in 695 aa. Contains a frameshift after codon 404;gbkey=CDS;gene=fepA;inference=similar to sequence:UniProtKB:Q56145;product=ferric enterochelin receptor (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	3951837	3952799	.	+	0	ID=cds3482;Parent=gene3581;Dbxref=PSEUDO:CAL13653.1;Note=Similar to Erwinia chrysanthemi ferrichrysobactin receptor precursor Fct SWALL:FCT_ERWCH (SWALL:Q47162) (735 aa) fasta scores: E(): 6.2e-78%2C 51.97 38d in 708 aa%2C and to Salmonella typhimurium ferrioxamine B receptor precursor FoxA SWALL:FOXA_SALTY (SWALL:Q56145) (702 aa) fasta scores: E(): 1.4e-80%2C 35.39 38d in 695 aa. Contains a frameshift after codon 404;gbkey=CDS;gene=fepA;inference=similar to sequence:UniProtKB:Q56145;product=ferric enterochelin receptor (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	3952458	3952796	.	+	.	ID=id6301;Note=Pfam match to entry PF00593 TonB_boxC%2C TonB dependent receptor C-terminal region%2C score 89.7%2C E-value 3.8e-24;gbkey=misc_feature;gene=fepA;inference=protein motif:PFAM:PF00593
AM286415.1	EMBL	signal_peptide	3950648	3950743	.	+	.	ID=id6302;Note=Signal peptide predicted for YE3624 by SignalP 2.0 HMM (Signal peptide probabilty 0.999) with cleavage site probability 0.924 between residues 32 and 33;gbkey=sig_peptide;pseudo=true
AM286415.1	EMBL	gene	3953098	3953511	.	+	.	ID=gene3582;Name=YE3626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3626
AM286415.1	EMBL	CDS	3953098	3953511	.	+	0	ID=cds3483;Parent=gene3582;Dbxref=EnsemblGenomes-Gn:YE3626,EnsemblGenomes-Tr:CAL13654,UniProtKB/TrEMBL:A1JQN2,NCBI_GP:CAL13654.1;Name=CAL13654.1;Note=Poor database matches. Weakly similar to Ralstonia solanacearum hypothetical transmembrane protein RSP0925 or RS05408 SWALL:Q8XRD3 (EMBL:AL646081) (136 aa) fasta scores: E(): 8.3%2C 28.05 38d in 139 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646081;product=putative exported protein;protein_id=CAL13654.1;transl_table=11
AM286415.1	EMBL	gene	3953586	3953975	.	+	.	ID=gene3583;Name=YE3627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3627
AM286415.1	EMBL	CDS	3953586	3953975	.	+	0	ID=cds3484;Parent=gene3583;Dbxref=EnsemblGenomes-Gn:YE3627,EnsemblGenomes-Tr:CAL13655,InterPro:IPR021647,UniProtKB/TrEMBL:A1JQN3,NCBI_GP:CAL13655.1;Name=CAL13655.1;Note=Weakly similar to Caulobacter crescentus hypothetical protein CC2017 SWALL:Q9A6R6 (EMBL:AE005875) (130 aa) fasta scores: E(): 0.0009%2C 27.77 38d in 108 aa%2Cand to Escherichia coli hypothetical protein CusX or b0573 SWALL:CUSX_ECOLI (SWALL:P77214) (110 aa) fasta scores: E(): 0.038%2C 28.88 38d in 90 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77214;product=putative exported protein;protein_id=CAL13655.1;transl_table=11
AM286415.1	EMBL	gene	3953989	3955287	.	+	.	ID=gene3584;Name=YE3628;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3628
AM286415.1	EMBL	CDS	3953989	3955287	.	+	0	ID=cds3485;Parent=gene3584;Dbxref=EnsemblGenomes-Gn:YE3628,EnsemblGenomes-Tr:CAL13656,GOA:A1JQN4,InterPro:IPR003423,UniProtKB/TrEMBL:A1JQN4,NCBI_GP:CAL13656.1;Name=CAL13656.1;Note=Similar to Alcaligenes eutrophus nickel and cobalt resistance protein precursor CnrC SWALL:CNRC_ALCEU (SWALL:P37974) (418 aa) fasta scores: E(): 2.6e-05%2C 25.65 id in 421 aa%2C and to Ralstonia solanacearum putative outer membrane cation efflux protein RSP0926 or RS05407 SWALL:Q8XRD2 (EMBL:AL646081) (434 aa) fasta scores: E(): 5.5e-26%2C 28.15 38d in 412 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37974;product=outer membrane efflux protein;protein_id=CAL13656.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3954115	3954699	.	+	.	ID=id6303;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 8.7%2C E-value 0.0004;gbkey=misc_feature;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	gene	3955284	3956813	.	+	.	ID=gene3585;Name=YE3629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3629
AM286415.1	EMBL	CDS	3955284	3956813	.	+	0	ID=cds3486;Parent=gene3585;Dbxref=EnsemblGenomes-Gn:YE3629,EnsemblGenomes-Tr:CAL13657,GOA:A1JQN6,InterPro:IPR006143,InterPro:IPR021647,UniProtKB/TrEMBL:A1JQN6,NCBI_GP:CAL13657.1;Name=CAL13657.1;Note=N-terminal region is similar to Escherichia coli putative copper efflux system protein CusB SWALL:CUSB_ECOLI (SWALL:P77239) (407 aa) fasta scores: E(): 1e-48%2C 39.85 38d in 399 aa. Full length CDS is similar to Ralstonia solanacearum putative cation efflux system transmembrane protein RSP0927 or RS05406 SWALL:Q8XRD1 (EMBL:AL646081) (513 aa) fasta scores: E(): 7.4e-62%2C 40.35 38d in 513 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77239;product=putative efflux system protein;protein_id=CAL13657.1;transl_table=11
AM286415.1	EMBL	gene	3956810	3959941	.	+	.	ID=gene3586;Name=YE3630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3630
AM286415.1	EMBL	CDS	3956810	3959941	.	+	0	ID=cds3487;Parent=gene3586;Dbxref=EnsemblGenomes-Gn:YE3630,EnsemblGenomes-Tr:CAL13658,GOA:A1JQN7,InterPro:IPR001036,InterPro:IPR004763,InterPro:IPR027463,UniProtKB/TrEMBL:A1JQN7,NCBI_GP:CAL13658.1;Name=CAL13658.1;Note=Similar to Escherichia coli putative cation efflux system protein CusA SWALL:CUSA_ECOLI (SWALL:P38054) (1047 aa) fasta scores: E(): 0%2C 64.39 38d in 1042 aa%2C and to Ralstonia solanacearum probable cation efflux system transmembrane protein RSP0928 or RS05405 SWALL:Q8XRD0 (EMBL:AL646081) (1047 aa) fasta scores: E(): 0%2C 68.81 38d in 1039 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P38054;product=putative cation efflux system protein;protein_id=CAL13658.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3956822	3959917	.	+	.	ID=id6304;Note=Pfam match to entry PF00873 ACR_tran%2CAcrB/AcrD/AcrF family%2C score 1287.9%2C E-value 0;gbkey=misc_feature;inference=protein motif:PFAM:PF00873
AM286415.1	EMBL	sequence_feature	3956846	3956899	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	3957830	3957883	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	3957896	3957964	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	3957974	3958042	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	3958142	3958210	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	3958253	3958321	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	3958418	3958471	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	3959426	3959479	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	3959498	3959566	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	3959579	3959647	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	3959735	3959803	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	3959846	3959914	.	+	.	ID=id6305;Note=12 probable transmembrane helices predicted for YE3630 by TMHMM2.0 at aa 13-30%2C 341-358%2C 363-385%2C 389-411%2C445-467%2C 482-504%2C 537-554%2C 873-890%2C 897-919%2C 924-946%2C976-998 and 1013-1035;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	3960008	3960673	.	-	.	ID=gene3587;Name=alkB;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;gene_synonym=aidD;locus_tag=YE3631
AM286415.1	EMBL	CDS	3960008	3960673	.	-	0	ID=cds3488;Parent=gene3587;Dbxref=EnsemblGenomes-Gn:YE3631,EnsemblGenomes-Tr:CAL13659,GOA:A1JQN8,InterPro:IPR005123,InterPro:IPR027450,UniProtKB/TrEMBL:A1JQN8,NCBI_GP:CAL13659.1;Name=CAL13659.1;Note=Similar to Escherichia coli alkylated DNA repair protein AlkB or AidD SWALL:ALKB_ECOLI (SWALL:P05050) (216 aa) fasta scores: E(): 9.3e-53%2C 61.29 38d in 217 aa%2C and to Salmonella typhimurium alkylated DNA repair protein STM2264 SWALL:ALKB_SALTY (SWALL:P37462) (216 aa) fasta scores: E(): 2e-53%2C 61.29 38d in 217 aa;gbkey=CDS;gene=alkB;inference=similar to sequence:UniProtKB:P37462;product=alkylated DNA repair protein;protein_id=CAL13659.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3960026	3960328	.	-	.	ID=id6306;Note=Pfam match to entry PF03171 2OG-FeII_Oxy%2C2OG-Fe(II) oxygenase superfamily%2C score 38.4%2C E-value 1.1e-08;gbkey=misc_feature;gene=alkB;inference=protein motif:PFAM:PF03171
AM286415.1	EMBL	sequence_feature	3960787	3972537	.	-	.	ID=id6307;Note=YGI-1%3B Low G+C region encoding an operon similar in both sequence and gene composition to the Actinobacillus sp. tight adherance cluster;gbkey=misc_feature;standard_name=YGI-1
AM286415.1	EMBL	gene	3961220	3961819	.	+	.	ID=gene3588;Name=YE3632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3632
AM286415.1	EMBL	CDS	3961220	3961819	.	+	0	ID=cds3489;Parent=gene3588;Dbxref=EnsemblGenomes-Gn:YE3632,EnsemblGenomes-Tr:CAL13660,GOA:A1JQP0,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JQP0,NCBI_GP:CAL13660.1;Name=CAL13660.1;Note=Poor database matches. N-terminus is similar to the N-terminal regions of Yersinia enterocolitica hypothetical protein Orf1 SWALL:Q9KKJ0 (EMBL:AF005744) (161 aa) fasta scores: E(): 1.1e-06%2C 37.14 38d in 105 aa%2C and Salmonella typhimurium putative inner membrane protein STM0341 SWALL:Q8ZRH8 (EMBL:AE008710) (254 aa) fasta scores: E(): 2.2e-05%2C 33.96 38d in 106 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF005744;product=membrane protein;protein_id=CAL13660.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3961721	3961789	.	+	.	ID=id6308;Note=1 probable transmembrane helix predicted for YE3632 by TMHMM2.0 at aa 168-190;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3962020	3962214	.	+	.	ID=gene3589;Name=flp;gbkey=Gene;gene=flp;gene_biotype=protein_coding;locus_tag=YE3633
AM286415.1	EMBL	CDS	3962020	3962214	.	+	0	ID=cds3490;Parent=gene3589;Dbxref=EnsemblGenomes-Gn:YE3633,EnsemblGenomes-Tr:CAL13661,UniProtKB/TrEMBL:A1JQP1,NCBI_GP:CAL13661.1;Name=CAL13661.1;Note=Similar to Ralstonia solanacearum putative pilin protein RSP1092 or RS02598 SWALL:Q8XQX6 (EMBL:AL646082) (58 aa) fasta scores: E(): 4.4%2C 33.33 38d in 48 aa%2C and to Pasteurella multocida hypothetical protein PM0855 SWALL:Q9CMH1 (EMBL:AE006124) (74 aa) fasta scores: E(): 4.5%2C 43.9 38d in 41 aa;gbkey=CDS;gene=flp;inference=similar to sequence:INSDC:AL646082;product=pilin protein%2C major subunit;protein_id=CAL13661.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3962098	3962151	.	+	.	ID=id6309;Note=1 probable transmembrane helix predicted for YE3633 by TMHMM2.0 at aa 27-44;gbkey=misc_feature;gene=flp;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3962286	3962708	.	+	.	ID=gene3590;Name=tadV;gbkey=Gene;gene=tadV;gene_biotype=protein_coding;locus_tag=YE3634
AM286415.1	EMBL	CDS	3962286	3962708	.	+	0	ID=cds3491;Parent=gene3590;Dbxref=EnsemblGenomes-Gn:YE3634,EnsemblGenomes-Tr:CAL13662,GOA:A1JQP2,InterPro:IPR000045,UniProtKB/TrEMBL:A1JQP2,NCBI_GP:CAL13662.1;Name=CAL13662.1;gbkey=CDS;gene=tadV;product=putative tight adherance operon protein;protein_id=CAL13662.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3962295	3962348	.	+	.	ID=id6310;Note=5 probable transmembrane helices predicted for YE3634 by TMHMM2.0 at aa 4-21%2C 33-52%2C 67-89%2C 96-113 and 123-139;gbkey=misc_feature;gene=tadV;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3962382	3962441	.	+	.	ID=id6310;Note=5 probable transmembrane helices predicted for YE3634 by TMHMM2.0 at aa 4-21%2C 33-52%2C 67-89%2C 96-113 and 123-139;gbkey=misc_feature;gene=tadV;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3962484	3962552	.	+	.	ID=id6310;Note=5 probable transmembrane helices predicted for YE3634 by TMHMM2.0 at aa 4-21%2C 33-52%2C 67-89%2C 96-113 and 123-139;gbkey=misc_feature;gene=tadV;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3962571	3962624	.	+	.	ID=id6310;Note=5 probable transmembrane helices predicted for YE3634 by TMHMM2.0 at aa 4-21%2C 33-52%2C 67-89%2C 96-113 and 123-139;gbkey=misc_feature;gene=tadV;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3962652	3962702	.	+	.	ID=id6310;Note=5 probable transmembrane helices predicted for YE3634 by TMHMM2.0 at aa 4-21%2C 33-52%2C 67-89%2C 96-113 and 123-139;gbkey=misc_feature;gene=tadV;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	3962753	3963586	.	+	.	ID=gene3591;Name=rcpC;gbkey=Gene;gene=rcpC;gene_biotype=protein_coding;locus_tag=YE3635
AM286415.1	EMBL	CDS	3962753	3963586	.	+	0	ID=cds3492;Parent=gene3591;Dbxref=EnsemblGenomes-Gn:YE3635,EnsemblGenomes-Tr:CAL13663,UniProtKB/TrEMBL:A1JQP4,NCBI_GP:CAL13663.1;Name=CAL13663.1;gbkey=CDS;gene=rcpC;product=putative tight adherance operon protein;protein_id=CAL13663.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3962765	3962821	.	+	.	ID=id6311;Note=1 probable transmembrane helix predicted for YE3635 by TMHMM2.0 at aa 5-23;gbkey=misc_feature;gene=rcpC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3963583	3964944	.	+	.	ID=gene3592;Name=rcpA;gbkey=Gene;gene=rcpA;gene_biotype=protein_coding;locus_tag=YE3636
AM286415.1	EMBL	CDS	3963583	3964944	.	+	0	ID=cds3493;Parent=gene3592;Dbxref=EnsemblGenomes-Gn:YE3636,EnsemblGenomes-Tr:CAL13664,GOA:A1JQQ0,InterPro:IPR001775,InterPro:IPR004846,UniProtKB/TrEMBL:A1JQQ0,NCBI_GP:CAL13664.1;Name=CAL13664.1;Note=Similar to Actinobacillus actinomycetemcomitans rough colony protein A rcpA SWALL:Q9X6J1 (EMBL:AF139249) (460 aa) fasta scores: E(): 1e-44%2C 39.46 38d in 446 aa%2Cand to Pasteurella multocida putative rough colony protein A PM0852 SWALL:Q9CMH4 (EMBL:AE006123) (470 aa) fasta scores: E(): 4.2e-38%2C 40.73 38d in 437 aa;gbkey=CDS;gene=rcpA;inference=similar to sequence:INSDC:AF139249;product=putative tight adherance operon protein;protein_id=CAL13664.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3963583	3963813	.	+	.	ID=id6312;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;gene=rcpA;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	sequence_feature	3963943	3964800	.	+	.	ID=id6313;Note=Pfam match to entry PF00263 GSPII_III%2C Bacterial type II and III secretion system protein%2C score 185.3%2CE-value 6.3e-53;gbkey=misc_feature;gene=rcpA;inference=protein motif:PFAM:PF00263
AM286415.1	EMBL	gene	3965213	3966331	.	+	.	ID=gene3593;Name=tadZ;gbkey=Gene;gene=tadZ;gene_biotype=protein_coding;locus_tag=YE3637
AM286415.1	EMBL	CDS	3965213	3966331	.	+	0	ID=cds3494;Parent=gene3593;Dbxref=EnsemblGenomes-Gn:YE3637,EnsemblGenomes-Tr:CAL13665,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQQ1,NCBI_GP:CAL13665.1;Name=CAL13665.1;gbkey=CDS;gene=tadZ;product=conserved hypothetical protein;protein_id=CAL13665.1;transl_table=11
AM286415.1	EMBL	gene	3966363	3967637	.	+	.	ID=gene3594;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=YE3638
AM286415.1	EMBL	CDS	3966363	3967637	.	+	0	ID=cds3495;Parent=gene3594;Dbxref=EnsemblGenomes-Gn:YE3638,EnsemblGenomes-Tr:CAL13666,GOA:A1JQQ2,InterPro:IPR001482,InterPro:IPR027417,UniProtKB/TrEMBL:A1JQQ2,NCBI_GP:CAL13666.1;Name=CAL13666.1;gbkey=CDS;gene=tadA;product=putative tight adherance operon protein;protein_id=CAL13666.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3966627	3967412	.	+	.	ID=id6314;Note=Pfam match to entry PF00437 GSPII_E%2C Type II/IV secretion system protein%2C score -39.1%2C E-value 1.2e-07;gbkey=misc_feature;gene=tadA;inference=protein motif:PFAM:PF00437
AM286415.1	EMBL	sequence_feature	3966909	3966941	.	+	.	ID=id6315;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=tadA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	3966960	3966980	.	+	.	ID=id6316;Note=PS00227 Tubulin subunits alpha%2C beta%2C and gamma signature.;gbkey=misc_feature;gene=tadA;inference=protein motif:Prosite:PS00227
AM286415.1	EMBL	sequence_feature	3966963	3966986	.	+	.	ID=id6317;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=tadA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3967673	3968515	.	+	.	ID=gene3595;Name=tadB;gbkey=Gene;gene=tadB;gene_biotype=protein_coding;locus_tag=YE3639
AM286415.1	EMBL	CDS	3967673	3968515	.	+	0	ID=cds3496;Parent=gene3595;Dbxref=EnsemblGenomes-Gn:YE3639,EnsemblGenomes-Tr:CAL13667,InterPro:IPR018076,UniProtKB/TrEMBL:A1JQQ4,NCBI_GP:CAL13667.1;Name=CAL13667.1;gbkey=CDS;gene=tadB;product=putative tight adherance operon protein;protein_id=CAL13667.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3967829	3967897	.	+	.	ID=id6318;Note=4 probable transmembrane helices predicted for YE3639 by TMHMM2.0 at aa 53-75%2C 79-96%2C 221-240 and 250-272;gbkey=misc_feature;gene=tadB;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3967907	3967960	.	+	.	ID=id6318;Note=4 probable transmembrane helices predicted for YE3639 by TMHMM2.0 at aa 53-75%2C 79-96%2C 221-240 and 250-272;gbkey=misc_feature;gene=tadB;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3968333	3968392	.	+	.	ID=id6318;Note=4 probable transmembrane helices predicted for YE3639 by TMHMM2.0 at aa 53-75%2C 79-96%2C 221-240 and 250-272;gbkey=misc_feature;gene=tadB;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3968420	3968488	.	+	.	ID=id6318;Note=4 probable transmembrane helices predicted for YE3639 by TMHMM2.0 at aa 53-75%2C 79-96%2C 221-240 and 250-272;gbkey=misc_feature;gene=tadB;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	3968512	3969336	.	+	.	ID=gene3596;Name=tadC;gbkey=Gene;gene=tadC;gene_biotype=protein_coding;locus_tag=YE3640
AM286415.1	EMBL	CDS	3968512	3969336	.	+	0	ID=cds3497;Parent=gene3596;Dbxref=EnsemblGenomes-Gn:YE3640,EnsemblGenomes-Tr:CAL13668,InterPro:IPR018076,UniProtKB/TrEMBL:A1JQQ5,NCBI_GP:CAL13668.1;Name=CAL13668.1;gbkey=CDS;gene=tadC;product=putative tight adherance operon protein;protein_id=CAL13668.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3968521	3968565	.	+	.	ID=id6319;Note=4 probable transmembrane helices predicted for YE3640 by TMHMM2.0 at aa 4-18%2C 66-88%2C 98-117 and 250-272;gbkey=misc_feature;gene=tadC;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	3968707	3968775	.	+	.	ID=id6319;Note=4 probable transmembrane helices predicted for YE3640 by TMHMM2.0 at aa 4-18%2C 66-88%2C 98-117 and 250-272;gbkey=misc_feature;gene=tadC;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	3968803	3968862	.	+	.	ID=id6319;Note=4 probable transmembrane helices predicted for YE3640 by TMHMM2.0 at aa 4-18%2C 66-88%2C 98-117 and 250-272;gbkey=misc_feature;gene=tadC;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	3969259	3969327	.	+	.	ID=id6319;Note=4 probable transmembrane helices predicted for YE3640 by TMHMM2.0 at aa 4-18%2C 66-88%2C 98-117 and 250-272;gbkey=misc_feature;gene=tadC;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	3969323	3970090	.	+	.	ID=gene3597;Name=tadD;gbkey=Gene;gene=tadD;gene_biotype=protein_coding;locus_tag=YE3641
AM286415.1	EMBL	CDS	3969323	3970090	.	+	0	ID=cds3498;Parent=gene3597;Dbxref=EnsemblGenomes-Gn:YE3641,EnsemblGenomes-Tr:CAL13669,InterPro:IPR011990,UniProtKB/TrEMBL:A1JQQ6,NCBI_GP:CAL13669.1;Name=CAL13669.1;gbkey=CDS;gene=tadD;product=putative tight adherance operon protein;protein_id=CAL13669.1;transl_table=11
AM286415.1	EMBL	gene	3970095	3970559	.	+	.	ID=gene3598;Name=tadE;gbkey=Gene;gene=tadE;gene_biotype=protein_coding;locus_tag=YE3642
AM286415.1	EMBL	CDS	3970095	3970559	.	+	0	ID=cds3499;Parent=gene3598;Dbxref=EnsemblGenomes-Gn:YE3642,EnsemblGenomes-Tr:CAL13670,InterPro:IPR012495,UniProtKB/TrEMBL:A1JQQ8,NCBI_GP:CAL13670.1;Name=CAL13670.1;gbkey=CDS;gene=tadE;product=putative tight adherance operon protein;protein_id=CAL13670.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3970131	3970199	.	+	.	ID=id6320;Note=1 probable transmembrane helix predicted for YE3642 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;gene=tadE;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3970543	3971121	.	+	.	ID=gene3599;Name=tadF;gbkey=Gene;gene=tadF;gene_biotype=protein_coding;locus_tag=YE3643
AM286415.1	EMBL	CDS	3970543	3971121	.	+	0	ID=cds3500;Parent=gene3599;Dbxref=EnsemblGenomes-Gn:YE3643,EnsemblGenomes-Tr:CAL13671,UniProtKB/TrEMBL:A1JQQ9,NCBI_GP:CAL13671.1;Name=CAL13671.1;gbkey=CDS;gene=tadF;product=putative tight adherance operon protein;protein_id=CAL13671.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3970603	3970671	.	+	.	ID=id6321;Note=1 probable transmembrane helix predicted for YE3643 by TMHMM2.0 at aa 21-43;gbkey=misc_feature;gene=tadF;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3971157	3972536	.	+	.	ID=gene3600;Name=tadG;gbkey=Gene;gene=tadG;gene_biotype=protein_coding;locus_tag=YE3644
AM286415.1	EMBL	CDS	3971157	3972536	.	+	0	ID=cds3501;Parent=gene3600;Dbxref=EnsemblGenomes-Gn:YE3644,EnsemblGenomes-Tr:CAL13672,InterPro:IPR002035,UniProtKB/TrEMBL:A1JQR0,NCBI_GP:CAL13672.1;Name=CAL13672.1;gbkey=CDS;gene=tadG;product=putative tight adherance operon protein;protein_id=CAL13672.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3971229	3971297	.	+	.	ID=id6322;Note=1 probable transmembrane helix predicted for YE3644 by TMHMM2.0 at aa 25-47;gbkey=misc_feature;gene=tadG;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3972581	3973006	.	-	.	ID=gene3601;Name=YE3645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3645
AM286415.1	EMBL	CDS	3972581	3973006	.	-	0	ID=cds3502;Parent=gene3601;Dbxref=EnsemblGenomes-Gn:YE3645,EnsemblGenomes-Tr:CAL13673,GOA:A1JQR1,InterPro:IPR003400,InterPro:IPR014170,UniProtKB/TrEMBL:A1JQR1,NCBI_GP:CAL13673.1;Name=CAL13673.1;gbkey=CDS;product=ExbD/TolR-family transport protein;protein_id=CAL13673.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3972596	3972976	.	-	.	ID=id6323;Note=Pfam match to entry PF02472 ExbD%2C Biopolymer transport protein ExbD/TolR%2C score 99.8%2C E-value 3.6e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF02472
AM286415.1	EMBL	sequence_feature	3972881	3972949	.	-	.	ID=id6324;Note=1 probable transmembrane helix predicted for YE3645 by TMHMM2.0 at aa 20-42;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	3973010	3973723	.	-	.	ID=gene3602;Name=YE3646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3646
AM286415.1	EMBL	CDS	3973010	3973723	.	-	0	ID=cds3503;Parent=gene3602;Dbxref=EnsemblGenomes-Gn:YE3646,EnsemblGenomes-Tr:CAL13674,GOA:A1JQR2,InterPro:IPR002898,InterPro:IPR014164,UniProtKB/TrEMBL:A1JQR2,NCBI_GP:CAL13674.1;Name=CAL13674.1;gbkey=CDS;product=MotA/TolQ/ExbB proton channel family protein;protein_id=CAL13674.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3973103	3973507	.	-	.	ID=id6325;Note=Pfam match to entry PF01618 MotA_ExbB%2CMotA/TolQ/ExbB proton channel family%2C score 181.0%2CE-value 1.2e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF01618
AM286415.1	EMBL	sequence_feature	3973613	3973681	.	-	.	ID=id6326;Note=3 probable transmembrane helices predicted for YE3646 by TMHMM2.0 at aa 15-37%2C 124-146 and 170-192;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3973286	3973354	.	-	.	ID=id6326;Note=3 probable transmembrane helices predicted for YE3646 by TMHMM2.0 at aa 15-37%2C 124-146 and 170-192;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3973148	3973216	.	-	.	ID=id6326;Note=3 probable transmembrane helices predicted for YE3646 by TMHMM2.0 at aa 15-37%2C 124-146 and 170-192;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3974502	3975713	.	+	.	ID=gene3603;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=YE3647
AM286415.1	EMBL	CDS	3974502	3975713	.	+	0	ID=cds3504;Parent=gene3603;Dbxref=EnsemblGenomes-Gn:YE3647,EnsemblGenomes-Tr:CAL13675,GOA:A1JQR3,InterPro:IPR000277,InterPro:IPR006233,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JQR3,NCBI_GP:CAL13675.1;Name=CAL13675.1;gbkey=CDS;gene=metC;product=putative cystathionine beta-lyase;protein_id=CAL13675.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3974535	3975692	.	+	.	ID=id6327;Note=Pfam match to entry PF01053 Cys_Met_Meta_PP%2CCys/Met metabolism PLP-dependent enzyme%2C score 476.7%2CE-value 1.2e-140;gbkey=misc_feature;gene=metC;inference=protein motif:PFAM:PF01053
AM286415.1	EMBL	sequence_feature	3975120	3975164	.	+	.	ID=id6328;Note=PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=metC;inference=protein motif:Prosite:PS00868
AM286415.1	EMBL	gene	3975920	3976582	.	+	.	ID=gene3604;Name=YE3648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3648
AM286415.1	EMBL	CDS	3975920	3976582	.	+	0	ID=cds3505;Parent=gene3604;Dbxref=EnsemblGenomes-Gn:YE3648,EnsemblGenomes-Tr:CAL13676,InterPro:IPR015414,UniProtKB/TrEMBL:A1JQR4,NCBI_GP:CAL13676.1;Name=CAL13676.1;gbkey=CDS;product=putative DedA-family membrane protein;protein_id=CAL13676.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3975989	3976057	.	+	.	ID=id6329;Note=5 probable transmembrane helices predicted for YE3648 by TMHMM2.0 at aa 24-46%2C 53-75%2C 126-148%2C 155-175 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	3976076	3976144	.	+	.	ID=id6329;Note=5 probable transmembrane helices predicted for YE3648 by TMHMM2.0 at aa 24-46%2C 53-75%2C 126-148%2C 155-175 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	3976295	3976363	.	+	.	ID=id6329;Note=5 probable transmembrane helices predicted for YE3648 by TMHMM2.0 at aa 24-46%2C 53-75%2C 126-148%2C 155-175 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	3976382	3976444	.	+	.	ID=id6329;Note=5 probable transmembrane helices predicted for YE3648 by TMHMM2.0 at aa 24-46%2C 53-75%2C 126-148%2C 155-175 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	3976487	3976555	.	+	.	ID=id6329;Note=5 probable transmembrane helices predicted for YE3648 by TMHMM2.0 at aa 24-46%2C 53-75%2C 126-148%2C 155-175 and 190-212;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	3976007	3976489	.	+	.	ID=id6330;Note=Pfam match to entry PF00597 DedA%2C DedA family %2Cscore 169.2%2C E-value 4.6e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF00597
AM286415.1	EMBL	sequence_feature	3976136	3976168	.	+	.	ID=id6331;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3976641	3977534	.	-	.	ID=gene3605;Name=YE3649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3649
AM286415.1	EMBL	CDS	3976641	3977534	.	-	0	ID=cds3506;Parent=gene3605;Dbxref=EnsemblGenomes-Gn:YE3649,EnsemblGenomes-Tr:CAL13677,GOA:A1JQR6,InterPro:IPR009057,InterPro:IPR009594,InterPro:IPR018060,UniProtKB/TrEMBL:A1JQR6,NCBI_GP:CAL13677.1;Name=CAL13677.1;gbkey=CDS;product=AraC-family regulatory protein;protein_id=CAL13677.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3976659	3976790	.	-	.	ID=id6332;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 30.8%2C E-value 2.1e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	3976809	3976946	.	-	.	ID=id6333;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 41.8%2C E-value 1e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	3976824	3976958	.	-	.	ID=id6334;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	gene	3977977	3980016	.	+	.	ID=gene3606;Name=YE3650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3650
AM286415.1	EMBL	CDS	3977977	3980016	.	+	0	ID=cds3507;Parent=gene3606;Dbxref=EnsemblGenomes-Gn:YE3650,EnsemblGenomes-Tr:CAL13678,InterPro:IPR006626,InterPro:IPR011050,InterPro:IPR012334,UniProtKB/TrEMBL:A1JQR7,NCBI_GP:CAL13678.1;Name=CAL13678.1;Note=Weakly similar to Enterococcus faecalis V583 cell wall surface anchor family protein SWALL:AAO79968 (EMBL:AE016947) (1055 aa) fasta scores: E(): 4e-10%2C 22.4 id in 616 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE016947;product=putative exported protein;protein_id=CAL13678.1;transl_table=11
AM286415.1	EMBL	gene	3980364	3981521	.	+	.	ID=gene3607;Name=YE3651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3651
AM286415.1	EMBL	CDS	3980364	3981521	.	+	0	ID=cds3508;Parent=gene3607;Dbxref=EnsemblGenomes-Gn:YE3651,EnsemblGenomes-Tr:CAL13679,GOA:A1JQR8,InterPro:IPR001670,InterPro:IPR018211,UniProtKB/TrEMBL:A1JQR8,NCBI_GP:CAL13679.1;Name=CAL13679.1;gbkey=CDS;product=putative iron-containing alcohol dehydrogenase;protein_id=CAL13679.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3980388	3981479	.	+	.	ID=id6335;Note=Pfam match to entry PF00465 Fe-ADH%2C Iron-containing alcohol dehydrogenase%2C score 133.0%2C E-value 3.6e-37;gbkey=misc_feature;inference=protein motif:PFAM:PF00465
AM286415.1	EMBL	sequence_feature	3980772	3980789	.	+	.	ID=id6336;Note=PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide.;gbkey=misc_feature;inference=protein motif:Prosite:PS00343
AM286415.1	EMBL	sequence_feature	3980874	3980960	.	+	.	ID=id6337;Note=PS00913 Iron-containing alcohol dehydrogenases signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00913
AM286415.1	EMBL	sequence_feature	3981147	3981209	.	+	.	ID=id6338;Note=PS00060 Iron-containing alcohol dehydrogenases signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00060
AM286415.1	EMBL	gene	3981740	3982573	.	+	.	ID=gene3608;Name=YE3652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3652
AM286415.1	EMBL	CDS	3981740	3982573	.	+	0	ID=cds3509;Parent=gene3608;Dbxref=EnsemblGenomes-Gn:YE3652,EnsemblGenomes-Tr:CAL13680,GOA:A1JQS1,InterPro:IPR001395,InterPro:IPR018170,InterPro:IPR020471,InterPro:IPR023210,UniProtKB/TrEMBL:A1JQS1,NCBI_GP:CAL13680.1;Name=CAL13680.1;gbkey=CDS;product=putative aldo/keto reductase family protein;protein_id=CAL13680.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3981764	3982531	.	+	.	ID=id6339;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 409.0%2C E-value 2.9e-120;gbkey=misc_feature;inference=protein motif:PFAM:PF00248
AM286415.1	EMBL	sequence_feature	3981860	3981913	.	+	.	ID=id6340;Note=PS00798 Aldo/keto reductase family signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00798
AM286415.1	EMBL	sequence_feature	3982106	3982159	.	+	.	ID=id6341;Note=PS00062 Aldo/keto reductase family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00062
AM286415.1	EMBL	sequence_feature	3982424	3982471	.	+	.	ID=id6342;Note=PS00063 Aldo/keto reductase family putative active site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00063
AM286415.1	EMBL	gene	3982575	3984878	.	-	.	ID=gene3609;Name=YE3653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3653
AM286415.1	EMBL	CDS	3982575	3984878	.	-	0	ID=cds3510;Parent=gene3609;Dbxref=EnsemblGenomes-Gn:YE3653,EnsemblGenomes-Tr:CAL13681,GOA:A1JQS9,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR013704,InterPro:IPR020612,InterPro:IPR022946,InterPro:IPR023404,InterPro:IPR024560,UniProtKB/TrEMBL:A1JQS9,NCBI_GP:CAL13681.1;Name=CAL13681.1;Note=Similar to Salmonella typhimurium putative Fe-S oxidoreductase family 2 STM3168 SWALL:Q8ZM03 (EMBL:AE008845) (723 aa) fasta scores: E(): 0%2C 83.44 38d in 719 aa%2C and to Escherichia coli O157:H7 hypothetical protein Z4370 SWALL:Q8XBS7 (EMBL:AE005531) (739 aa) fasta scores: E(): 0%2C 81.4 38d in 742 aa. CDS is extended at the C-terminus in comparison to orthologues;gbkey=CDS;inference=similar to sequence:INSDC:AE008845;product=conserved hypothetical protein;protein_id=CAL13681.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3983691	3983753	.	-	.	ID=id6343;Note=PS01278 Uncharacterized protein family UPF0004 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01278
AM286415.1	EMBL	gene	3985062	3986489	.	-	.	ID=gene3610;Name=sufI;gbkey=Gene;gene=sufI;gene_biotype=protein_coding;locus_tag=YE3654
AM286415.1	EMBL	CDS	3985062	3986489	.	-	0	ID=cds3511;Parent=gene3610;Dbxref=EnsemblGenomes-Gn:YE3654,EnsemblGenomes-Tr:CAL13682,GOA:A1JQT0,InterPro:IPR001117,InterPro:IPR006311,InterPro:IPR008972,InterPro:IPR011706,InterPro:IPR011707,InterPro:IPR026589,UniProtKB/TrEMBL:A1JQT0,NCBI_GP:CAL13682.1;Name=CAL13682.1;gbkey=CDS;gene=sufI;product=putative cell division protein;protein_id=CAL13682.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3985545	3985967	.	-	.	ID=id6344;Note=Pfam match to entry PF00394 Cu-oxidase%2C Multicopper oxidase%2C score -1.6%2C E-value 0.011;gbkey=misc_feature;gene=sufI;inference=protein motif:PFAM:PF00394
AM286415.1	EMBL	gene	3986652	3987383	.	-	.	ID=gene3611;Name=plsC;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;gene_synonym=parF;locus_tag=YE3655
AM286415.1	EMBL	CDS	3986652	3987383	.	-	0	ID=cds3512;Parent=gene3611;Dbxref=EnsemblGenomes-Gn:YE3655,EnsemblGenomes-Tr:CAL13683,GOA:A1JQT2,InterPro:IPR002123,InterPro:IPR004552,UniProtKB/TrEMBL:A1JQT2,NCBI_GP:CAL13683.1;Name=CAL13683.1;gbkey=CDS;gene=plsC;product=putative acyltransferase;protein_id=CAL13683.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3986691	3987209	.	-	.	ID=id6345;Note=Pfam match to entry PF01553 Acyltransferase%2CAcyltransferase%2C score 193.5%2C E-value 2.2e-55;gbkey=misc_feature;gene=plsC;inference=protein motif:PFAM:PF01553
AM286415.1	EMBL	sequence_feature	3987306	3987374	.	-	.	ID=id6346;Note=3 probable transmembrane helices predicted for YE3655 by TMHMM2.0 at aa 4-26%2C 97-116 and 163-185;gbkey=misc_feature;gene=plsC;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	3987036	3987095	.	-	.	ID=id6346;Note=3 probable transmembrane helices predicted for YE3655 by TMHMM2.0 at aa 4-26%2C 97-116 and 163-185;gbkey=misc_feature;gene=plsC;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	3986829	3986897	.	-	.	ID=id6346;Note=3 probable transmembrane helices predicted for YE3655 by TMHMM2.0 at aa 4-26%2C 97-116 and 163-185;gbkey=misc_feature;gene=plsC;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	gene	3987565	3989841	.	-	.	ID=gene3612;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=YE3656
AM286415.1	EMBL	CDS	3987565	3989841	.	-	0	ID=cds3513;Parent=gene3612;Dbxref=EnsemblGenomes-Gn:YE3656,EnsemblGenomes-Tr:CAL13684,GOA:A1JQT3,InterPro:IPR002205,InterPro:IPR005742,InterPro:IPR006691,InterPro:IPR013758,InterPro:IPR013760,InterPro:IPR024946,UniProtKB/TrEMBL:A1JQT3,NCBI_GP:CAL13684.1;Name=CAL13684.1;gbkey=CDS;gene=parC;product=DNA topoisomerase IV subunit A;protein_id=CAL13684.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3987748	3987912	.	-	.	ID=id6347;Note=Pfam match to entry PF03989 DNA_gyraseA_C%2C DNA gyrase C-terminal domain%2C beta-propeller%2C score 35.4%2CE-value 8.4e-08;gbkey=misc_feature;gene=parC;inference=protein motif:PFAM:PF03989
AM286415.1	EMBL	sequence_feature	3987916	3988059	.	-	.	ID=id6348;Note=Pfam match to entry PF03989 DNA_gyraseA_C%2C DNA gyrase C-terminal domain%2C beta-propeller%2C score 21.0%2CE-value 0.0018;gbkey=misc_feature;gene=parC;inference=protein motif:PFAM:PF03989
AM286415.1	EMBL	sequence_feature	3987970	3987993	.	-	.	ID=id6349;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=parC;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	3988411	3989745	.	-	.	ID=id6350;Note=Pfam match to entry PF00521 DNA_topoisoIV%2C DNA gyrase/topoisomerase IV%2C subunit A%2C score 851.2%2C E-value 2.3e-253;gbkey=misc_feature;gene=parC;inference=protein motif:PFAM:PF00521
AM286415.1	EMBL	gene	3990153	3990746	.	+	.	ID=gene3613;Name=mdaB;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;gene_synonym=mda66;locus_tag=YE3657
AM286415.1	EMBL	CDS	3990153	3990746	.	+	0	ID=cds3514;Parent=gene3613;Dbxref=EnsemblGenomes-Gn:YE3657,EnsemblGenomes-Tr:CAL13685,InterPro:IPR003680,InterPro:IPR029039,UniProtKB/TrEMBL:A1JQT4,NCBI_GP:CAL13685.1;Name=CAL13685.1;gbkey=CDS;gene=mdaB;product=putative modulator of drug activity;protein_id=CAL13685.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3990156	3990731	.	+	.	ID=id6351;Note=Pfam match to entry PF02525 Flavodoxin_2%2CFlavodoxin-like fold%2C score 222.8%2C E-value 3.2e-64;gbkey=misc_feature;gene=mdaB;inference=protein motif:PFAM:PF02525
AM286415.1	EMBL	sequence_feature	3990483	3990506	.	+	.	ID=id6352;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=mdaB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	3990779	3991084	.	+	.	ID=gene3614;Name=YE3658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3658
AM286415.1	EMBL	CDS	3990779	3991084	.	+	0	ID=cds3515;Parent=gene3614;Dbxref=EnsemblGenomes-Gn:YE3658,EnsemblGenomes-Tr:CAL13686,InterPro:IPR007138,InterPro:IPR011008,UniProtKB/TrEMBL:A1JQT6,NCBI_GP:CAL13686.1;Name=CAL13686.1;Note=Similar to Salmonella typhimurium%2C and Salmonella typhi putative cytoplasmic protein STM3180 or STY3358 SWALL:Q8XFF1 (EMBL:AE008846) (104 aa) fasta scores: E(): 6.2e-19%2C 52.94 38d in 102 aa%2C and to Escherichia coli%2C and Escherichia coli O157:H7 hypothetical protein YgiN SWALL:YGIN_ECOLI (SWALL:P40718) (104 aa) fasta scores: E(): 1.2e-18%2C 52 38d in 100 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P40718;product=conserved hypothetical protein;protein_id=CAL13686.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3990779	3991078	.	+	.	ID=id6353;Note=Pfam match to entry PF02619 DUF176%2C Uncharacterized ACR%2C YneC family COG1359%2C score 73.4%2C E-value 3e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF02619
AM286415.1	EMBL	gene	3991110	3992027	.	-	.	ID=gene3615;Name=crgA;gbkey=Gene;gene=crgA;gene_biotype=protein_coding;locus_tag=YE3659
AM286415.1	EMBL	CDS	3991110	3992027	.	-	0	ID=cds3516;Parent=gene3615;Dbxref=EnsemblGenomes-Gn:YE3659,EnsemblGenomes-Tr:CAL13687,GOA:A1JQT7,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JQT7,NCBI_GP:CAL13687.1;Name=CAL13687.1;gbkey=CDS;gene=crgA;product=LysR-family regulatory protein;protein_id=CAL13687.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3991146	3991766	.	-	.	ID=id6354;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 130.4%2C E-value 2.1e-36;gbkey=misc_feature;gene=crgA;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	3991836	3992015	.	-	.	ID=id6355;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 66.7%2C E-value 3.1e-17;gbkey=misc_feature;gene=crgA;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	3991881	3991973	.	-	.	ID=id6356;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;gene=crgA;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	gene	3992048	3993943	.	-	.	ID=gene3616;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;gene_synonym=nfxD;locus_tag=YE3660
AM286415.1	EMBL	CDS	3992048	3993943	.	-	0	ID=cds3517;Parent=gene3616;Dbxref=EnsemblGenomes-Gn:YE3660,EnsemblGenomes-Tr:CAL13688,GOA:A1JQT9,InterPro:IPR001241,InterPro:IPR002288,InterPro:IPR003594,InterPro:IPR005737,InterPro:IPR006171,InterPro:IPR013506,InterPro:IPR013759,InterPro:IPR013760,InterPro:IPR014721,InterPro:IPR018522,InterPro:IPR020568,UniProtKB/TrEMBL:A1JQT9,NCBI_GP:CAL13688.1;Name=CAL13688.1;gbkey=CDS;gene=parE;product=topoisomerase IV subunit B;protein_id=CAL13688.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3992081	3992290	.	-	.	ID=id6357;Note=Pfam match to entry PF00986 DNA_gyraseB_C%2C DNA gyrase B subunit%2C carboxyl terminus%2C score 104.0%2C E-value 1.9e-28;gbkey=misc_feature;gene=parE;inference=protein motif:PFAM:PF00986
AM286415.1	EMBL	sequence_feature	3992669	3992695	.	-	.	ID=id6358;Note=PS00177 DNA topoisomerase II signature.;gbkey=misc_feature;gene=parE;inference=protein motif:Prosite:PS00177
AM286415.1	EMBL	sequence_feature	3992783	3993289	.	-	.	ID=id6359;Note=Pfam match to entry PF00204 DNA_gyraseB%2C DNA gyrase B%2C score 191.9%2C E-value 6.6e-55;gbkey=misc_feature;gene=parE;inference=protein motif:PFAM:PF00204
AM286415.1	EMBL	sequence_feature	3993425	3993862	.	-	.	ID=id6360;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 95.3%2C E-value 8e-26;gbkey=misc_feature;gene=parE;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	3994058	3994642	.	-	.	ID=gene3617;Name=YE3661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3661
AM286415.1	EMBL	CDS	3994058	3994642	.	-	0	ID=cds3518;Parent=gene3617;Dbxref=EnsemblGenomes-Gn:YE3661,EnsemblGenomes-Tr:CAL13689,InterPro:IPR008886,InterPro:IPR029058,PDB:4FLE,UniProtKB/TrEMBL:A1JQU0,NCBI_GP:CAL13689.1;Name=CAL13689.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13689.1;transl_table=11
AM286415.1	EMBL	gene	3994639	3995466	.	-	.	ID=gene3618;Name=icc;gbkey=Gene;gene=icc;gene_biotype=protein_coding;locus_tag=YE3662
AM286415.1	EMBL	CDS	3994639	3995466	.	-	0	ID=cds3519;Parent=gene3618;Dbxref=EnsemblGenomes-Gn:YE3662,EnsemblGenomes-Tr:CAL13690,GOA:A1JQU1,InterPro:IPR004843,InterPro:IPR013622,InterPro:IPR026575,InterPro:IPR029052,UniProtKB/TrEMBL:A1JQU1,NCBI_GP:CAL13690.1;Name=CAL13690.1;gbkey=CDS;gene=icc;product=Icc protein homologue;protein_id=CAL13690.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3994846	3995424	.	-	.	ID=id6361;Note=Pfam match to entry PF00149 Metallophos%2CCalcineurin-like phosphoesterase%2C score 74.8%2C E-value 1.2e-19;gbkey=misc_feature;gene=icc;inference=protein motif:PFAM:PF00149
AM286415.1	EMBL	gene	3995546	3995971	.	-	.	ID=gene3619;Name=YE3663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3663
AM286415.1	EMBL	CDS	3995546	3995971	.	-	0	ID=cds3520;Parent=gene3619;Dbxref=EnsemblGenomes-Gn:YE3663,EnsemblGenomes-Tr:CAL13691,InterPro:IPR009659,UniProtKB/TrEMBL:A1JQU3,NCBI_GP:CAL13691.1;Name=CAL13691.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13691.1;transl_table=11
AM286415.1	EMBL	gene	3995983	3996615	.	-	.	ID=gene3620;Name=YE3664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3664
AM286415.1	EMBL	CDS	3995983	3996615	.	-	0	ID=cds3521;Parent=gene3620;Dbxref=EnsemblGenomes-Gn:YE3664,EnsemblGenomes-Tr:CAL13692,GOA:A1JQU4,InterPro:IPR000086,InterPro:IPR004385,InterPro:IPR015797,InterPro:IPR020084,UniProtKB/TrEMBL:A1JQU4,NCBI_GP:CAL13692.1;Name=CAL13692.1;gbkey=CDS;product=putative MutT-family protein;protein_id=CAL13692.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3996025	3996450	.	-	.	ID=id6362;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 78.9%2C E-value 6.7e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	gene	3996933	3998414	.	+	.	ID=gene3621;Name=hasF;gbkey=Gene;gene=hasF;gene_biotype=protein_coding;gene_synonym=mtcB,mukA,refI,tolC;locus_tag=YE3665
AM286415.1	EMBL	CDS	3996933	3998414	.	+	0	ID=cds3522;Parent=gene3621;Dbxref=EnsemblGenomes-Gn:YE3665,EnsemblGenomes-Tr:CAL13693,GOA:A1JQU6,InterPro:IPR003423,InterPro:IPR010130,UniProtKB/TrEMBL:A1JQU6,NCBI_GP:CAL13693.1;Name=CAL13693.1;gbkey=CDS;gene=hasF;product=ABC-transporter outer membrane component;protein_id=CAL13693.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3997005	3997595	.	+	.	ID=id6363;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 154.5%2C E-value 1.2e-43;gbkey=misc_feature;gene=hasF;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	sequence_feature	3997626	3998237	.	+	.	ID=id6364;Note=Pfam match to entry PF02321 OEP%2C Outer membrane efflux protein%2C score 180.2%2C E-value 2.1e-51;gbkey=misc_feature;gene=hasF;inference=protein motif:PFAM:PF02321
AM286415.1	EMBL	gene	3998660	3999349	.	+	.	ID=gene3622;Name=YE3666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3666
AM286415.1	EMBL	CDS	3998660	3999349	.	+	0	ID=cds3523;Parent=gene3622;Dbxref=EnsemblGenomes-Gn:YE3666,EnsemblGenomes-Tr:CAL13694,InterPro:IPR009576,NCBI_GP:CAL13694.1;Name=CAL13694.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13694.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3998714	3998767	.	+	.	ID=id6365;Note=1 probable transmembrane helix predicted for YE3666 by TMHMM2.0 at aa 19-36;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	3998738	3998770	.	+	.	ID=id6366;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	3999360	4000520	.	+	.	ID=gene3623;Name=YE3667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3667
AM286415.1	EMBL	CDS	3999360	4000520	.	+	0	ID=cds3524;Parent=gene3623;Dbxref=EnsemblGenomes-Gn:YE3667,EnsemblGenomes-Tr:CAL13695,InterPro:IPR005494,InterPro:IPR016185,UniProtKB/TrEMBL:A1JQU9,NCBI_GP:CAL13695.1;Name=CAL13695.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13695.1;transl_table=11
AM286415.1	EMBL	sequence_feature	3999366	4000514	.	+	.	ID=id6367;Note=Pfam match to entry PF03738 GSP_synth%2CGlutathionylspermidine synthase%2C score 574.9%2C E-value 3.3e-170;gbkey=misc_feature;inference=protein motif:PFAM:PF03738
AM286415.1	EMBL	gene	4000693	4001475	.	-	.	ID=gene3624;Name=YE3668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3668
AM286415.1	EMBL	CDS	4000693	4001475	.	-	0	ID=cds3525;Parent=gene3624;Dbxref=EnsemblGenomes-Gn:YE3668,EnsemblGenomes-Tr:CAL13696,GOA:A1JQV1,InterPro:IPR004183,InterPro:IPR014436,UniProtKB/TrEMBL:A1JQV1,NCBI_GP:CAL13696.1;Name=CAL13696.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13696.1;transl_table=11
AM286415.1	EMBL	gene	4001890	4002543	.	-	.	ID=gene3625;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;gene_synonym=htrP;locus_tag=YE3669
AM286415.1	EMBL	CDS	4001890	4002543	.	-	0	ID=cds3526;Parent=gene3625;Dbxref=EnsemblGenomes-Gn:YE3669,EnsemblGenomes-Tr:CAL13697,GOA:A1JQV2,InterPro:IPR000422,InterPro:IPR017945,NCBI_GP:CAL13697.1;Name=CAL13697.1;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=CAL13697.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4001911	4002498	.	-	.	ID=id6368;Note=Pfam match to entry PF00926 DHBP_synthase%2C3%2C4-dihydroxy-2-butanone 4-phosphate synthase%2C score 427.9%2C E-value 6e-126;gbkey=misc_feature;gene=ribB;inference=protein motif:PFAM:PF00926
AM286415.1	EMBL	gene	4002671	4002820	.	-	.	ID=gene3626;Name=YE3670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3670
AM286415.1	EMBL	CDS	4002671	4002820	.	-	0	ID=cds3527;Parent=gene3626;Dbxref=EnsemblGenomes-Gn:YE3670,EnsemblGenomes-Tr:CCP19185,UniProtKB/TrEMBL:K8FID4,NCBI_GP:CCP19185.1;Name=CCP19185.1;Note=Doubtful CDS. Similar to an internal region of Yersinia pestis hypothetical protein YPO0657 SWALL:Q8ZI57 (EMBL:AJ414144) (83 aa) fasta scores: E(): 4.4e-16%2C 89.13%25 id in 46 aa;gbkey=CDS;product=hypothetical protein;protein_id=CCP19185.1;transl_table=11
AM286415.1	EMBL	transcript	4002700	4002884	.	-	.	ID=rna131;Note=FMN riboswitch (RFN element) (RF00050) as predicted by Rfam%2C score 129.56%2C positions 1 to 137;gbkey=misc_RNA
AM286415.1	EMBL	exon	4002700	4002884	.	-	.	ID=id6369;Parent=rna131;Note=FMN riboswitch (RFN element) (RF00050) as predicted by Rfam%2C score 129.56%2C positions 1 to 137;gbkey=misc_RNA
AM286415.1	EMBL	gene	4003009	4003308	.	+	.	ID=gene3627;Name=YE3671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3671
AM286415.1	EMBL	CDS	4003009	4003308	.	+	0	ID=cds3528;Parent=gene3627;Dbxref=EnsemblGenomes-Gn:YE3671,EnsemblGenomes-Tr:CAL13698,InterPro:IPR007475,UniProtKB/TrEMBL:A1JQV4,NCBI_GP:CAL13698.1;Name=CAL13698.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13698.1;transl_table=11
AM286415.1	EMBL	gene	4003352	4004596	.	-	.	ID=gene3628;Name=asoB;gbkey=Gene;gene=asoB;gene_biotype=protein_coding;gene_synonym=yjeH;locus_tag=YE3672
AM286415.1	EMBL	CDS	4003352	4004596	.	-	0	ID=cds3529;Parent=gene3628;Dbxref=EnsemblGenomes-Gn:YE3672,EnsemblGenomes-Tr:CAL13699,GOA:A1JQV5,InterPro:IPR002293,UniProtKB/TrEMBL:A1JQV5,NCBI_GP:CAL13699.1;Name=CAL13699.1;gbkey=CDS;gene=asoB;product=putative permease;protein_id=CAL13699.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4003379	4004587	.	-	.	ID=id6370;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -216.4%2C E-value 0.00015;gbkey=misc_feature;gene=asoB;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	4004492	4004560	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	4004396	4004464	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	4004267	4004335	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	4004186	4004254	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	4004099	4004167	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	4003988	4004056	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	4003862	4003930	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	4003739	4003798	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	4003610	4003678	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	4003499	4003567	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	4003412	4003480	.	-	.	ID=id6371;Note=11 probable transmembrane helices predicted for YE3672 by TMHMM2.0 at aa 13-35%2C 45-67%2C 88-110%2C 115-137%2C144-166%2C 181-203%2C 223-245%2C 267-286%2C 307-329%2C 344-366 and 373-395;gbkey=misc_feature;gene=asoB;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	4003625	4003657	.	-	.	ID=id6372;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=asoB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4004749	4006179	.	-	.	ID=gene3629;Name=rfaE;gbkey=Gene;gene=rfaE;gene_biotype=protein_coding;gene_synonym=waaE;locus_tag=YE3673
AM286415.1	EMBL	CDS	4004749	4006179	.	-	0	ID=cds3530;Parent=gene3629;Dbxref=EnsemblGenomes-Gn:YE3673,EnsemblGenomes-Tr:CAL13700,GOA:A1JQV6,InterPro:IPR002173,InterPro:IPR004821,InterPro:IPR011611,InterPro:IPR011913,InterPro:IPR011914,InterPro:IPR014729,InterPro:IPR023030,InterPro:IPR029056,NCBI_GP:CAL13700.1;Name=CAL13700.1;gbkey=CDS;gene=rfaE;product=ADP-heptose synthase;protein_id=CAL13700.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4004770	4005162	.	-	.	ID=id6373;Note=Pfam match to entry PF01467 CTP_transf_2%2CCytidylyltransferase%2C score 146.0%2C E-value 4.4e-41;gbkey=misc_feature;gene=rfaE;inference=protein motif:PFAM:PF01467
AM286415.1	EMBL	sequence_feature	4005259	4006152	.	-	.	ID=id6374;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 188.7%2C E-value 6.1e-54;gbkey=misc_feature;gene=rfaE;inference=protein motif:PFAM:PF00294
AM286415.1	EMBL	sequence_feature	4005958	4006029	.	-	.	ID=id6375;Note=PS00583 pfkB family of carbohydrate kinases signature 1.;gbkey=misc_feature;gene=rfaE;inference=protein motif:Prosite:PS00583
AM286415.1	EMBL	gene	4006430	4009282	.	-	.	ID=gene3630;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=YE3674
AM286415.1	EMBL	CDS	4006430	4009282	.	-	0	ID=cds3531;Parent=gene3630;Dbxref=EnsemblGenomes-Gn:YE3674,EnsemblGenomes-Tr:CAL13701,GOA:A1JQV7,InterPro:IPR005190,InterPro:IPR013546,InterPro:IPR023057,NCBI_GP:CAL13701.1;Name=CAL13701.1;gbkey=CDS;gene=glnE;product=glutamate-ammonia-ligase adenylyltransferase;protein_id=CAL13701.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4006793	4007458	.	-	.	ID=id6376;Note=Pfam match to entry PF03710 GlnE%2C Glutamate-ammonia ligase adenylyltransferase%2C score 445.2%2C E-value 3.7e-131;gbkey=misc_feature;gene=glnE;inference=protein motif:PFAM:PF03710
AM286415.1	EMBL	sequence_feature	4008377	4009039	.	-	.	ID=id6377;Note=Pfam match to entry PF03710 GlnE%2C Glutamate-ammonia ligase adenylyltransferase%2C score 427.8%2C E-value 6.5e-126;gbkey=misc_feature;gene=glnE;inference=protein motif:PFAM:PF03710
AM286415.1	EMBL	gene	4009427	4010752	.	-	.	ID=gene3631;Name=YE3675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3675
AM286415.1	EMBL	CDS	4009427	4010752	.	-	0	ID=cds3532;Parent=gene3631;Dbxref=EnsemblGenomes-Gn:YE3675,EnsemblGenomes-Tr:CAL13702,InterPro:IPR023577,UniProtKB/TrEMBL:A1JQV9,NCBI_GP:CAL13702.1;Name=CAL13702.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13702.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4009802	4009849	.	-	.	ID=id6378;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00038
AM286415.1	EMBL	gene	4011077	4011697	.	+	.	ID=gene3632;Name=YE3676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3676
AM286415.1	EMBL	CDS	4011077	4011697	.	+	0	ID=cds3533;Parent=gene3632;Dbxref=EnsemblGenomes-Gn:YE3676,EnsemblGenomes-Tr:CAL13703,InterPro:IPR003646,InterPro:IPR016476,UniProtKB/TrEMBL:A1JQW0,NCBI_GP:CAL13703.1;Name=CAL13703.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13703.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4011593	4011661	.	+	.	ID=id6379;Note=1 probable transmembrane helix predicted for YE3676 by TMHMM2.0 at aa 173-195;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4011864	4013108	.	+	.	ID=gene3633;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=YE3677
AM286415.1	EMBL	CDS	4011864	4013108	.	+	0	ID=cds3534;Parent=gene3633;Dbxref=EnsemblGenomes-Gn:YE3677,EnsemblGenomes-Tr:CAL13704,GOA:A1JQW2,InterPro:IPR002646,InterPro:IPR003607,InterPro:IPR006674,InterPro:IPR012006,NCBI_GP:CAL13704.1;Name=CAL13704.1;gbkey=CDS;gene=cca;product=tRNA nucleotidyltransferase;protein_id=CAL13704.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4012035	4012511	.	+	.	ID=id6380;Note=Pfam match to entry PF01743 PolyA_pol%2C Poly A polymerase family%2C score 215.7%2C E-value 4.5e-62;gbkey=misc_feature;gene=cca;inference=protein motif:PFAM:PF01743
AM286415.1	EMBL	sequence_feature	4012545	4012850	.	+	.	ID=id6381;Note=Pfam match to entry PF01966 HD%2C HD domain%2C score 60.7%2C E-value 2.1e-15;gbkey=misc_feature;gene=cca;inference=protein motif:PFAM:PF01966
AM286415.1	EMBL	gene	4013298	4014116	.	-	.	ID=gene3634;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=YE3678
AM286415.1	EMBL	CDS	4013298	4014116	.	-	0	ID=cds3535;Parent=gene3634;Dbxref=EnsemblGenomes-Gn:YE3678,EnsemblGenomes-Tr:CAL13705,GOA:A1JQW4,InterPro:IPR003824,NCBI_GP:CAL13705.1;Name=CAL13705.1;gbkey=CDS;gene=bacA;product=putative bacitracin resistance protein;protein_id=CAL13705.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4014039	4014107	.	-	.	ID=id6382;Note=8 probable transmembrane helices predicted for YE3678 by TMHMM2.0 at aa 4-26%2C 47-69%2C 89-108%2C 115-137%2C152-171%2C 184-206%2C 226-248 and 253-271;gbkey=misc_feature;gene=bacA;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	4013910	4013978	.	-	.	ID=id6382;Note=8 probable transmembrane helices predicted for YE3678 by TMHMM2.0 at aa 4-26%2C 47-69%2C 89-108%2C 115-137%2C152-171%2C 184-206%2C 226-248 and 253-271;gbkey=misc_feature;gene=bacA;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	4013793	4013852	.	-	.	ID=id6382;Note=8 probable transmembrane helices predicted for YE3678 by TMHMM2.0 at aa 4-26%2C 47-69%2C 89-108%2C 115-137%2C152-171%2C 184-206%2C 226-248 and 253-271;gbkey=misc_feature;gene=bacA;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	4013706	4013774	.	-	.	ID=id6382;Note=8 probable transmembrane helices predicted for YE3678 by TMHMM2.0 at aa 4-26%2C 47-69%2C 89-108%2C 115-137%2C152-171%2C 184-206%2C 226-248 and 253-271;gbkey=misc_feature;gene=bacA;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	4013604	4013663	.	-	.	ID=id6382;Note=8 probable transmembrane helices predicted for YE3678 by TMHMM2.0 at aa 4-26%2C 47-69%2C 89-108%2C 115-137%2C152-171%2C 184-206%2C 226-248 and 253-271;gbkey=misc_feature;gene=bacA;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	4013499	4013567	.	-	.	ID=id6382;Note=8 probable transmembrane helices predicted for YE3678 by TMHMM2.0 at aa 4-26%2C 47-69%2C 89-108%2C 115-137%2C152-171%2C 184-206%2C 226-248 and 253-271;gbkey=misc_feature;gene=bacA;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	4013373	4013441	.	-	.	ID=id6382;Note=8 probable transmembrane helices predicted for YE3678 by TMHMM2.0 at aa 4-26%2C 47-69%2C 89-108%2C 115-137%2C152-171%2C 184-206%2C 226-248 and 253-271;gbkey=misc_feature;gene=bacA;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	4013304	4013360	.	-	.	ID=id6382;Note=8 probable transmembrane helices predicted for YE3678 by TMHMM2.0 at aa 4-26%2C 47-69%2C 89-108%2C 115-137%2C152-171%2C 184-206%2C 226-248 and 253-271;gbkey=misc_feature;gene=bacA;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	4013343	4013696	.	-	.	ID=id6383;Note=Pfam match to entry PF02673 BacA%2C Bacitracin resistance protein BacA%2C score 218.2%2C E-value 7.7e-63;gbkey=misc_feature;gene=bacA;inference=protein motif:PFAM:PF02673
AM286415.1	EMBL	sequence_feature	4013361	4013396	.	-	.	ID=id6384;Note=PS00936 Ribosomal protein L35 signature.;gbkey=misc_feature;gene=bacA;inference=protein motif:Prosite:PS00936
AM286415.1	EMBL	sequence_feature	4013997	4014101	.	-	.	ID=id6385;Note=Pfam match to entry PF02673 BacA%2C Bacitracin resistance protein BacA%2C score 22.3%2C E-value 4e-06;gbkey=misc_feature;gene=bacA;inference=protein motif:PFAM:PF02673
AM286415.1	EMBL	gene	4014278	4014637	.	-	.	ID=gene3635;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=YE3679
AM286415.1	EMBL	CDS	4014278	4014637	.	-	0	ID=cds3536;Parent=gene3635;Dbxref=EnsemblGenomes-Gn:YE3679,EnsemblGenomes-Tr:CAL13706,GOA:A1JQW6,InterPro:IPR006156,InterPro:IPR006157,UniProtKB/TrEMBL:A1JQW6,NCBI_GP:CAL13706.1;Name=CAL13706.1;gbkey=CDS;gene=folB;product=putative dihydroneopterin aldolase;protein_id=CAL13706.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4014290	4014628	.	-	.	ID=id6386;Note=Pfam match to entry PF02152 FolB%2C Dihydroneopterin aldolase%2C score 175.1%2C E-value 7.5e-50;gbkey=misc_feature;gene=folB;inference=protein motif:PFAM:PF02152
AM286415.1	EMBL	gene	4014745	4015398	.	+	.	ID=gene3636;Name=YE3680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3680
AM286415.1	EMBL	CDS	4014745	4015398	.	+	0	ID=cds3537;Parent=gene3636;Dbxref=EnsemblGenomes-Gn:YE3680,EnsemblGenomes-Tr:CAL13707,GOA:A1JQW7,InterPro:IPR003811,NCBI_GP:CAL13707.1;Name=CAL13707.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13707.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4014754	4014822	.	+	.	ID=id6387;Note=5 probable transmembrane helices predicted for YE3680 by TMHMM2.0 at aa 4-26%2C 54-76%2C 80-102%2C 109-131 and 136-158;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4014904	4014972	.	+	.	ID=id6387;Note=5 probable transmembrane helices predicted for YE3680 by TMHMM2.0 at aa 4-26%2C 54-76%2C 80-102%2C 109-131 and 136-158;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4014982	4015050	.	+	.	ID=id6387;Note=5 probable transmembrane helices predicted for YE3680 by TMHMM2.0 at aa 4-26%2C 54-76%2C 80-102%2C 109-131 and 136-158;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4015069	4015137	.	+	.	ID=id6387;Note=5 probable transmembrane helices predicted for YE3680 by TMHMM2.0 at aa 4-26%2C 54-76%2C 80-102%2C 109-131 and 136-158;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4015150	4015218	.	+	.	ID=id6387;Note=5 probable transmembrane helices predicted for YE3680 by TMHMM2.0 at aa 4-26%2C 54-76%2C 80-102%2C 109-131 and 136-158;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	4014769	4015305	.	+	.	ID=id6388;Note=Pfam match to entry PF02660 DUF205%2C Domain of unknown function DUF%2C score 354.6%2C E-value 7e-104;gbkey=misc_feature;inference=protein motif:PFAM:PF02660
AM286415.1	EMBL	sequence_feature	4014985	4015017	.	+	.	ID=id6389;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4015225	4015257	.	+	.	ID=id6390;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4015553	4016566	.	-	.	ID=gene3637;Name=gcp;gbkey=Gene;gene=gcp;gene_biotype=protein_coding;locus_tag=YE3681
AM286415.1	EMBL	CDS	4015553	4016566	.	-	0	ID=cds3538;Parent=gene3637;Dbxref=EnsemblGenomes-Gn:YE3681,EnsemblGenomes-Tr:CAL13708,GOA:A1JQW9,InterPro:IPR000905,InterPro:IPR017860,InterPro:IPR017861,InterPro:IPR022450,NCBI_GP:CAL13708.1;Name=CAL13708.1;gbkey=CDS;gene=gcp;product=putative glycoprotease;protein_id=CAL13708.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4015625	4016566	.	-	.	ID=id6391;Note=Pfam match to entry PF00814 Peptidase_M22%2CGlycoprotease family%2C score 649.7%2C E-value 9.9e-193;gbkey=misc_feature;gene=gcp;inference=protein motif:PFAM:PF00814
AM286415.1	EMBL	sequence_feature	4016219	4016281	.	-	.	ID=id6392;Note=PS01016 Glycoprotease family signature.;gbkey=misc_feature;gene=gcp;inference=protein motif:Prosite:PS01016
AM286415.1	EMBL	gene	4016940	4017155	.	+	.	ID=gene3638;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=YE3682
AM286415.1	EMBL	CDS	4016940	4017155	.	+	0	ID=cds3539;Parent=gene3638;Dbxref=EnsemblGenomes-Gn:YE3682,EnsemblGenomes-Tr:CAL13709,GOA:A1JQX1,InterPro:IPR001911,InterPro:IPR018278,NCBI_GP:CAL13709.1;Name=CAL13709.1;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=CAL13709.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4016943	4017104	.	+	.	ID=id6393;Note=Pfam match to entry PF01165 Ribosomal_S21%2CRibosomal protein S21%2C score 127.9%2C E-value 1.2e-35;gbkey=misc_feature;gene=rpsU;inference=protein motif:PFAM:PF01165
AM286415.1	EMBL	sequence_feature	4016976	4017014	.	+	.	ID=id6394;Note=PS01181 Ribosomal protein S21 signature.;gbkey=misc_feature;gene=rpsU;inference=protein motif:Prosite:PS01181
AM286415.1	EMBL	gene	4017292	4019040	.	+	.	ID=gene3639;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;gene_synonym=dnaP,parB;locus_tag=YE3683
AM286415.1	EMBL	CDS	4017292	4019040	.	+	0	ID=cds3540;Parent=gene3639;Dbxref=EnsemblGenomes-Gn:YE3683,EnsemblGenomes-Tr:CAL13710,GOA:A1JQX2,InterPro:IPR002694,InterPro:IPR006171,InterPro:IPR006295,InterPro:IPR013173,InterPro:IPR013264,InterPro:IPR016136,InterPro:IPR019475,UniProtKB/TrEMBL:A1JQX2,NCBI_GP:CAL13710.1;Name=CAL13710.1;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=CAL13710.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4017304	4017597	.	+	.	ID=id6395;Note=Pfam match to entry PF01807 zf-CHC2%2C CHC2 zinc finger%2C score 224.9%2C E-value 7.5e-65;gbkey=misc_feature;gene=dnaG;inference=protein motif:PFAM:PF01807
AM286415.1	EMBL	sequence_feature	4018066	4018314	.	+	.	ID=id6396;Note=Pfam match to entry PF01751 Toprim%2C Toprim domain %2Cscore 99.1%2C E-value 5.9e-27;gbkey=misc_feature;gene=dnaG;inference=protein motif:PFAM:PF01751
AM286415.1	EMBL	gene	4019198	4021036	.	+	.	ID=gene3640;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;gene_synonym=alt;locus_tag=YE3684
AM286415.1	EMBL	CDS	4019198	4021036	.	+	0	ID=cds3541;Parent=gene3640;Dbxref=EnsemblGenomes-Gn:YE3684,EnsemblGenomes-Tr:CAL13711,GOA:A1JQY6,InterPro:IPR000943,InterPro:IPR007127,InterPro:IPR007624,InterPro:IPR007627,InterPro:IPR007630,InterPro:IPR007631,InterPro:IPR009042,InterPro:IPR011991,InterPro:IPR012760,InterPro:IPR013324,InterPro:IPR013325,InterPro:IPR014284,InterPro:IPR028630,UniProtKB/TrEMBL:A1JQY6,NCBI_GP:CAL13711.1;Name=CAL13711.1;gbkey=CDS;gene=rpoD;product=RNA polymerase sigma factor RpoD;protein_id=CAL13711.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4019198	4019446	.	+	.	ID=id6397;Note=Pfam match to entry PF03979 sigma70_r1_1%2C Sigma-70 factor%2C region 1.1%2C score 156.4%2C E-value 3.3e-44;gbkey=misc_feature;gene=rpoD;inference=protein motif:PFAM:PF03979
AM286415.1	EMBL	sequence_feature	4019486	4019596	.	+	.	ID=id6398;Note=Pfam match to entry PF00140 sigma70_r1_2%2C Sigma-70 factor%2C region 1.2%2C score 61.4%2C E-value 1.2e-15;gbkey=misc_feature;gene=rpoD;inference=protein motif:PFAM:PF00140
AM286415.1	EMBL	sequence_feature	4020401	4020442	.	+	.	ID=id6399;Note=PS00715 Sigma-70 factors family signature 1.;gbkey=misc_feature;gene=rpoD;inference=protein motif:Prosite:PS00715
AM286415.1	EMBL	sequence_feature	4020908	4020988	.	+	.	ID=id6400;Note=PS00716 Sigma-70 factors family signature 2.;gbkey=misc_feature;gene=rpoD;inference=protein motif:Prosite:PS00716
AM286415.1	EMBL	gene	4021243	4021319	.	+	.	ID=gene3641;Name=tRNA-Met (CAT);gbkey=Gene;gene=tRNA-Met (CAT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	4021243	4021319	.	+	.	ID=rna132;Parent=gene3641;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	exon	4021243	4021319	.	+	.	ID=id6401;Parent=rna132;gbkey=tRNA;gene=tRNA-Met (CAT);product=tRNA-Met
AM286415.1	EMBL	gene	4021463	4022794	.	-	.	ID=gene3642;Name=YE3685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3685
AM286415.1	EMBL	CDS	4021463	4022794	.	-	0	ID=cds3542;Parent=gene3642;Dbxref=EnsemblGenomes-Gn:YE3685,EnsemblGenomes-Tr:CAL13712,InterPro:IPR008302,UniProtKB/TrEMBL:A1JQY8,NCBI_GP:CAL13712.1;Name=CAL13712.1;Note=Similar to the N-terminal region of Oceanobacillus iheyensis hypothetical conserved protein OB1304 SWALL:BAC13260 (EMBL:AP004597) (509 aa) fasta scores: E(): 1.1e-20%2C 31.22 38d in 442 aa. N-terminus is similar to the N-terminal region of Bacillus halodurans hypothetical protein BH0674 SWALL:Q9KF23 (EMBL:AP001509) (418 aa) fasta scores: E(): 1.6e-19%2C 35.96 38d in 317 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP004597;product=hypothetical protein;protein_id=CAL13712.1;transl_table=11
AM286415.1	EMBL	gene	4022847	4023932	.	-	.	ID=gene3643;Name=YE3686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3686
AM286415.1	EMBL	CDS	4022847	4023932	.	-	0	ID=cds3543;Parent=gene3643;Dbxref=EnsemblGenomes-Gn:YE3686,EnsemblGenomes-Tr:CAL13713,UniProtKB/TrEMBL:A1JQY9,NCBI_GP:CAL13713.1;Name=CAL13713.1;Note=No significant database matches;gbkey=CDS;product=hypothetical protein;protein_id=CAL13713.1;transl_table=11
AM286415.1	EMBL	gene	4023950	4025827	.	-	.	ID=gene3644;Name=YE3687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3687
AM286415.1	EMBL	CDS	4023950	4025827	.	-	0	ID=cds3544;Parent=gene3644;Dbxref=EnsemblGenomes-Gn:YE3687,EnsemblGenomes-Tr:CAL13714,GOA:A1JQZ0,InterPro:IPR001764,InterPro:IPR017853,InterPro:IPR019800,UniProtKB/TrEMBL:A1JQZ0,NCBI_GP:CAL13714.1;Name=CAL13714.1;Note=Similar to Alteromonas sp. beta-hexosaminidase A precursor Cht60 SWALL:HEXA_ALTSO (SWALL:P48823) (598 aa) fasta scores: E(): 3.9e-38%2C 32.65 38d in 594 aa%2C and to Thermoanaerobacter tengcongensis beta-glucosidase-related glycosidases TTE0241 SWALL:Q8RD12 (EMBL:AE012996) (591 aa) fasta scores: E(): 8.3e-52%2C 36.15 38d in 639 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P48823;product=glycosyl hydrolase family protein;protein_id=CAL13714.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4024697	4025608	.	-	.	ID=id6402;Note=Pfam match to entry PF00933 Glyco_hydro_3%2C Glycosyl hydrolase family 3 N terminal domain%2C score 239.1%2CE-value 4.1e-69;gbkey=misc_feature;inference=protein motif:PFAM:PF00933
AM286415.1	EMBL	sequence_feature	4024862	4024915	.	-	.	ID=id6403;Note=PS00775 Glycosyl hydrolases family 3 active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00775
AM286415.1	EMBL	gene	4026155	4027015	.	-	.	ID=gene3645;Name=YE3688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3688
AM286415.1	EMBL	CDS	4026155	4027015	.	-	0	ID=cds3545;Parent=gene3645;Dbxref=EnsemblGenomes-Gn:YE3688,EnsemblGenomes-Tr:CAL13715,GOA:A1JQZ2,InterPro:IPR000281,InterPro:IPR001347,InterPro:IPR009057,InterPro:IPR011991,UniProtKB/TrEMBL:A1JQZ2,NCBI_GP:CAL13715.1;Name=CAL13715.1;Note=Similar to Vibrio cholerae hypothetical protein VC0204 SWALL:Q9KVE2 (EMBL:AE004110) (282 aa) fasta scores: E(): 1.7e-38%2C 45.07 38d in 284 aa%2C and to Escherichia coli als operon repressor RpiR or AlsR SWALL:RPIR_ECOLI (SWALL:P39266) (296 aa) fasta scores: E(): 2.8e-14%2C 28.01 id in 257 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P39266;product=RpiR family regulatory protein;protein_id=CAL13715.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4026224	4026631	.	-	.	ID=id6404;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 62.5%2C E-value 5.9e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	sequence_feature	4026677	4027015	.	-	.	ID=id6405;Note=Pfam match to entry PF01418 HTH_6%2C Helix-turn-helix domain%2C rpiR family%2C score 100.9%2C E-value 1.7e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF01418
AM286415.1	EMBL	gene	4027243	4028151	.	+	.	ID=gene3646;Name=YE3689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3689
AM286415.1	EMBL	CDS	4027243	4028151	.	+	0	ID=cds3546;Parent=gene3646;Dbxref=EnsemblGenomes-Gn:YE3689,EnsemblGenomes-Tr:CAL13716,GOA:A1JQZ4,InterPro:IPR001347,InterPro:IPR005486,InterPro:IPR005488,UniProtKB/TrEMBL:A1JQZ4,NCBI_GP:CAL13716.1;Name=CAL13716.1;Note=Similar to Vibrio cholerae GckR family protein VC0206 SWALL:Q9KVE0 (EMBL:AE004110) (305 aa) fasta scores: E(): 1.4e-70%2C 68.22 38d in 299 aa%2C and to Pasteurella multocida hypothetical protein PM1576 SWALL:YF76_PASMU (SWALL:P57951) (301 aa) fasta scores: E(): 2.6e-66%2C 64.78 id in 301 aa. Similar to YE1027%2C 58.305 38dentity (58.305 ungapped) in 295 aa overlap;gbkey=CDS;inference=similar to sequence:UniProtKB:P57951;product=conserved hypothetical protein;protein_id=CAL13716.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4027414	4027890	.	+	.	ID=id6406;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 46.0%2C E-value 5.4e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	sequence_feature	4027801	4027854	.	+	.	ID=id6407;Note=PS01272 Glucokinase regulatory protein family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01272
AM286415.1	EMBL	gene	4028154	4029605	.	+	.	ID=gene3647;Name=YE3690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3690
AM286415.1	EMBL	CDS	4028154	4029605	.	+	0	ID=cds3547;Parent=gene3647;Dbxref=EnsemblGenomes-Gn:YE3690,EnsemblGenomes-Tr:CAL13717,GOA:A1JQZ5,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR013013,InterPro:IPR018113,UniProtKB/TrEMBL:A1JQZ5,NCBI_GP:CAL13717.1;Name=CAL13717.1;Note=Similar to Escherichia coli PTS system%2Ctrehalose-specific IIBC component TreB SWALL:PTTB_ECOLI (SWALL:P36672) (473 aa) fasta scores: E(): 1.3e-17%2C 24.52 id in 473 aa%2C and to Vibrio cholerae PTS system%2Csucrose-specific IIBC component VC0207 SWALL:PTSB_VIBCH (SWALL:Q9KVD9) (482 aa) fasta scores: E(): 2.8e-123%2C 70.8 id in 483 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9KVD9;product=photransferase system%2C IIBC component;protein_id=CAL13717.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4028181	4028282	.	+	.	ID=id6408;Note=Pfam match to entry PF00367 PTS_EIIB%2Cphosphotransferase system%2C EIIB%2C score 38.1%2C E-value 1.3e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00367
AM286415.1	EMBL	sequence_feature	4028214	4028267	.	+	.	ID=id6409;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01035
AM286415.1	EMBL	sequence_feature	4028526	4029386	.	+	.	ID=id6410;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 44.2%2C E-value 1.9e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	sequence_feature	4028532	4028600	.	+	.	ID=id6411;Note=10 probable transmembrane helices predicted for YE3690 by TMHMM2.0 at aa 127-149%2C 164-186%2C 193-215%2C230-252%2C 265-287%2C 307-329%2C 341-363%2C 378-397%2C 404-426 and 453-475;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4028643	4028711	.	+	.	ID=id6411;Note=10 probable transmembrane helices predicted for YE3690 by TMHMM2.0 at aa 127-149%2C 164-186%2C 193-215%2C230-252%2C 265-287%2C 307-329%2C 341-363%2C 378-397%2C 404-426 and 453-475;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4028730	4028798	.	+	.	ID=id6411;Note=10 probable transmembrane helices predicted for YE3690 by TMHMM2.0 at aa 127-149%2C 164-186%2C 193-215%2C230-252%2C 265-287%2C 307-329%2C 341-363%2C 378-397%2C 404-426 and 453-475;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4028841	4028909	.	+	.	ID=id6411;Note=10 probable transmembrane helices predicted for YE3690 by TMHMM2.0 at aa 127-149%2C 164-186%2C 193-215%2C230-252%2C 265-287%2C 307-329%2C 341-363%2C 378-397%2C 404-426 and 453-475;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4028946	4029014	.	+	.	ID=id6411;Note=10 probable transmembrane helices predicted for YE3690 by TMHMM2.0 at aa 127-149%2C 164-186%2C 193-215%2C230-252%2C 265-287%2C 307-329%2C 341-363%2C 378-397%2C 404-426 and 453-475;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4029072	4029140	.	+	.	ID=id6411;Note=10 probable transmembrane helices predicted for YE3690 by TMHMM2.0 at aa 127-149%2C 164-186%2C 193-215%2C230-252%2C 265-287%2C 307-329%2C 341-363%2C 378-397%2C 404-426 and 453-475;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4029174	4029242	.	+	.	ID=id6411;Note=10 probable transmembrane helices predicted for YE3690 by TMHMM2.0 at aa 127-149%2C 164-186%2C 193-215%2C230-252%2C 265-287%2C 307-329%2C 341-363%2C 378-397%2C 404-426 and 453-475;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4029285	4029344	.	+	.	ID=id6411;Note=10 probable transmembrane helices predicted for YE3690 by TMHMM2.0 at aa 127-149%2C 164-186%2C 193-215%2C230-252%2C 265-287%2C 307-329%2C 341-363%2C 378-397%2C 404-426 and 453-475;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4029363	4029431	.	+	.	ID=id6411;Note=10 probable transmembrane helices predicted for YE3690 by TMHMM2.0 at aa 127-149%2C 164-186%2C 193-215%2C230-252%2C 265-287%2C 307-329%2C 341-363%2C 378-397%2C 404-426 and 453-475;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4029510	4029578	.	+	.	ID=id6411;Note=10 probable transmembrane helices predicted for YE3690 by TMHMM2.0 at aa 127-149%2C 164-186%2C 193-215%2C230-252%2C 265-287%2C 307-329%2C 341-363%2C 378-397%2C 404-426 and 453-475;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	4029655	4030596	.	-	.	ID=gene3648;Name=YE3691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3691
AM286415.1	EMBL	CDS	4029655	4030596	.	-	0	ID=cds3548;Parent=gene3648;Dbxref=EnsemblGenomes-Gn:YE3691,EnsemblGenomes-Tr:CAL13718,GOA:A1JQZ8,InterPro:IPR012338,InterPro:IPR015868,UniProtKB/TrEMBL:A1JQZ8,NCBI_GP:CAL13718.1;Name=CAL13718.1;Note=Similar to Rhizobium etli thermolabile glutaminase GlsA SWALL:GLSA_RHIET (SWALL:O87405) (309 aa) fasta scores: E(): 1.7e-30%2C 36.03 38d in 308 aa%2C and to Escherichia coli probable glutaminase YbaS SWALL:GLS1_ECOLI (SWALL:P77454) (310 aa) fasta scores: E(): 2.2e-89%2C 76.69 38d in 309 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77454;product=putative glutaminase;protein_id=CAL13718.1;transl_table=11
AM286415.1	EMBL	gene	4030666	4032222	.	-	.	ID=gene3649;Name=YE3692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3692
AM286415.1	EMBL	CDS	4030666	4032222	.	-	0	ID=cds3549;Parent=gene3649;Dbxref=EnsemblGenomes-Gn:YE3692,EnsemblGenomes-Tr:CAL13719,GOA:A1JQZ9,InterPro:IPR002293,InterPro:IPR022520,UniProtKB/TrEMBL:A1JQZ9,NCBI_GP:CAL13719.1;Name=CAL13719.1;Note=Similar to Brucella melitensis glutamate/gamma-aminobutyrate antiporter BMEII0909 SWALL:Q8YBJ1 (EMBL:AE009724) (510 aa) fasta scores: E(): 5.6e-127%2C 63.45 38d in 498 aa%2C and to Chlamydia muridarum amino acid antiporter TC0488 SWALL:Q9PKH7 (EMBL:AE002317) (466 aa) fasta scores: E(): 1.2e-53%2C 35.03 38d in 471 aa. CDS is extended at the C-terminus in comparison to some orthologues;gbkey=CDS;inference=similar to sequence:INSDC:AE009724;product=putative amino acid permease;protein_id=CAL13719.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4030801	4032090	.	-	.	ID=id6412;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score -220.0%2C E-value 0.0002;gbkey=misc_feature;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	4032112	4032165	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	4032010	4032078	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	4031869	4031937	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	4031764	4031832	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	4031653	4031721	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	4031533	4031592	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	4031422	4031490	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	4031275	4031343	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	4031128	4031196	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	4031023	4031091	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	4030912	4030980	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	4030807	4030875	.	-	.	ID=id6413;Note=12 probable transmembrane helices predicted for YE3692 by TMHMM2.0 at aa 20-37%2C 49-71%2C 96-118%2C 131-153%2C168-190%2C 211-230%2C 245-267%2C 294-316%2C 343-365%2C 378-400%2C415-437 and 450-472;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	4032296	4033696	.	-	.	ID=gene3650;Name=gadA;gbkey=Gene;gene=gadA;gene_biotype=protein_coding;gene_synonym=gadS;locus_tag=YE3693
AM286415.1	EMBL	CDS	4032296	4033696	.	-	0	ID=cds3550;Parent=gene3650;Dbxref=EnsemblGenomes-Gn:YE3693,EnsemblGenomes-Tr:CAL13720,GOA:A1JR00,InterPro:IPR002129,InterPro:IPR010107,InterPro:IPR015421,InterPro:IPR015424,InterPro:IPR021115,UniProtKB/TrEMBL:A1JR00,NCBI_GP:CAL13720.1;Name=CAL13720.1;Note=Similar to Escherichia coli glutamate decarboxylase alpha GadA or GadS SWALL:DCEA_ECOLI (SWALL:P80063) (466 aa) fasta scores: E(): 2.1e-172%2C 82.61 38d in 466 aa%2C and to Escherichia coli%2C and Escherichia coli O157:H7 glutamate decarboxylase beta GadB SWALL:DCEB_ECOLI (SWALL:P28302) (466 aa) fasta scores: E(): 7e-172%2C 82.18 id in 466 aa;gbkey=CDS;gene=gadA;inference=similar to sequence:UniProtKB:P80063;product=glutamate decarboxylase;protein_id=CAL13720.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4032548	4033600	.	-	.	ID=id6414;Note=Pfam match to entry PF00282 pyridoxal_deC%2CPyridoxal-dependent decarboxylase conserved domain%2C score 522.5%2C E-value 2e-154;gbkey=misc_feature;gene=gadA;inference=protein motif:PFAM:PF00282
AM286415.1	EMBL	sequence_feature	4032827	4032892	.	-	.	ID=id6415;Note=PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=gadA;inference=protein motif:Prosite:PS00392
AM286415.1	EMBL	sequence_feature	4032953	4032994	.	-	.	ID=id6416;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;gbkey=misc_feature;gene=gadA;inference=protein motif:Prosite:PS01039
AM286415.1	EMBL	gene	4034021	4034479	.	-	.	ID=gene3651;Name=YE3694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3694
AM286415.1	EMBL	CDS	4034021	4034479	.	-	0	ID=cds3551;Parent=gene3651;Dbxref=EnsemblGenomes-Gn:YE3694,EnsemblGenomes-Tr:CAL13721,InterPro:IPR002577,InterPro:IPR011991,UniProtKB/TrEMBL:A1JR02,NCBI_GP:CAL13721.1;Name=CAL13721.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein PA1607 SWALL:Q9I3B4 (EMBL:AE004588) (146 aa) fasta scores: E(): 2.9e-28%2C 53.84 38d in 143 aa. C-terminal region in similar to Rhizobium meliloti hypothetical protein RA1074 or SMA1960 SWALL:Q92Y14 (EMBL:AE007293) (125 aa) fasta scores: E(): 2.2e-20%2C 51.3 38d in 115 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE007293;product=putative transcriptional regulator;protein_id=CAL13721.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4034126	4034158	.	-	.	ID=id6417;Note=PS00626 Regulator of chromosome condensation (RCC1) signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00626
AM286415.1	EMBL	sequence_feature	4034144	4034416	.	-	.	ID=id6418;Note=Pfam match to entry PF01638 DUF24%2C Transcriptional regulator%2C score 80.3%2C E-value 2.6e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF01638
AM286415.1	EMBL	gene	4034588	4035826	.	+	.	ID=gene3652;Name=YE3695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3695
AM286415.1	EMBL	CDS	4034588	4035826	.	+	0	ID=cds3552;Parent=gene3652;Dbxref=EnsemblGenomes-Gn:YE3695,EnsemblGenomes-Tr:CAL13722,GOA:A1JR04,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JR04,NCBI_GP:CAL13722.1;Name=CAL13722.1;Note=Similar to Yersinia pestis probable sugar transporter YPO3263 SWALL:Q8ZBX1 (EMBL:AJ414156) (399 aa) fasta scores: E(): 1.7e-63%2C 45.59 38d in 386 aa%2C and to the C-terminal region of Rhizobium meliloti hypothetical protein RA1073 or SMA1959 SWALL:Q92Y15 (EMBL:AE007293) (469 aa) fasta scores: E(): 7.2e-71%2C 54.02 38d in 385 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414156;product=putative transporter protein;protein_id=CAL13722.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4034648	4034716	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	4034774	4034842	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	4034867	4034926	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	4034936	4035004	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	4035038	4035106	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	4035119	4035187	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	4035284	4035352	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	4035380	4035439	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	4035458	4035526	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	4035536	4035595	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	4035644	4035712	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	4035722	4035790	.	+	.	ID=id6419;Note=12 probable transmembrane helices predicted for YE3695 by TMHMM2.0 at aa 21-43%2C 63-85%2C 94-113%2C 117-139%2C151-173%2C 178-200%2C 233-255%2C 265-284%2C 291-313%2C 317-336%2C353-375 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	4034657	4035820	.	+	.	ID=id6420;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -96.8%2C E-value 0.00019;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	4035812	4035823	.	+	.	ID=id6421;Note=PS00294 Prenyl group binding site (CAAX box).;gbkey=misc_feature;inference=protein motif:Prosite:PS00294
AM286415.1	EMBL	gene	4035918	4036490	.	+	.	ID=gene3653;Name=YE3696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3696
AM286415.1	EMBL	CDS	4035918	4036490	.	+	0	ID=cds3553;Parent=gene3653;Dbxref=EnsemblGenomes-Gn:YE3696,EnsemblGenomes-Tr:CAL13723,InterPro:IPR005325,UniProtKB/TrEMBL:A1JR06,NCBI_GP:CAL13723.1;Name=CAL13723.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13723.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4035993	4036061	.	+	.	ID=id6422;Note=6 probable transmembrane helices predicted for YE3696 by TMHMM2.0 at aa 26-48%2C 52-69%2C 76-98%2C 102-124%2C131-153 and 163-185;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4036071	4036124	.	+	.	ID=id6422;Note=6 probable transmembrane helices predicted for YE3696 by TMHMM2.0 at aa 26-48%2C 52-69%2C 76-98%2C 102-124%2C131-153 and 163-185;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4036143	4036211	.	+	.	ID=id6422;Note=6 probable transmembrane helices predicted for YE3696 by TMHMM2.0 at aa 26-48%2C 52-69%2C 76-98%2C 102-124%2C131-153 and 163-185;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4036221	4036289	.	+	.	ID=id6422;Note=6 probable transmembrane helices predicted for YE3696 by TMHMM2.0 at aa 26-48%2C 52-69%2C 76-98%2C 102-124%2C131-153 and 163-185;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4036308	4036376	.	+	.	ID=id6422;Note=6 probable transmembrane helices predicted for YE3696 by TMHMM2.0 at aa 26-48%2C 52-69%2C 76-98%2C 102-124%2C131-153 and 163-185;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4036404	4036472	.	+	.	ID=id6422;Note=6 probable transmembrane helices predicted for YE3696 by TMHMM2.0 at aa 26-48%2C 52-69%2C 76-98%2C 102-124%2C131-153 and 163-185;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	4036643	4037542	.	+	.	ID=gene3654;Name=YE3697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3697
AM286415.1	EMBL	CDS	4036643	4037542	.	+	0	ID=cds3554;Parent=gene3654;Dbxref=EnsemblGenomes-Gn:YE3697,EnsemblGenomes-Tr:CAL13724,GOA:A1JR07,InterPro:IPR000620,UniProtKB/TrEMBL:A1JR07,NCBI_GP:CAL13724.1;Name=CAL13724.1;Note=Similar to Salmonella typhi putative membrane protein STY1543 SWALL:Q8Z701 (EMBL:AL627270) (300 aa) fasta scores: E(): 1.4e-32%2C 37.45 38d in 291 aa. Weakly similar to Erwinia chrysanthemi protein involved in the pectate lyase and cellulase regulation PecM SWALL:PECM_ERWCH (SWALL:P42194) (297 aa) fasta scores: E(): 1.6e-06%2C 23.05 38d in 308 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P42194;product=putative membrane protein;protein_id=CAL13724.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4036661	4036729	.	+	.	ID=id6423;Note=10 probable transmembrane helices predicted for YE3697 by TMHMM2.0 at aa 7-29%2C 33-50%2C 57-76%2C 86-108%2C115-134%2C 139-161%2C 168-190%2C 205-227%2C 234-256 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4036739	4036792	.	+	.	ID=id6423;Note=10 probable transmembrane helices predicted for YE3697 by TMHMM2.0 at aa 7-29%2C 33-50%2C 57-76%2C 86-108%2C115-134%2C 139-161%2C 168-190%2C 205-227%2C 234-256 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4036811	4036870	.	+	.	ID=id6423;Note=10 probable transmembrane helices predicted for YE3697 by TMHMM2.0 at aa 7-29%2C 33-50%2C 57-76%2C 86-108%2C115-134%2C 139-161%2C 168-190%2C 205-227%2C 234-256 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4036898	4036966	.	+	.	ID=id6423;Note=10 probable transmembrane helices predicted for YE3697 by TMHMM2.0 at aa 7-29%2C 33-50%2C 57-76%2C 86-108%2C115-134%2C 139-161%2C 168-190%2C 205-227%2C 234-256 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4036985	4037044	.	+	.	ID=id6423;Note=10 probable transmembrane helices predicted for YE3697 by TMHMM2.0 at aa 7-29%2C 33-50%2C 57-76%2C 86-108%2C115-134%2C 139-161%2C 168-190%2C 205-227%2C 234-256 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4037057	4037125	.	+	.	ID=id6423;Note=10 probable transmembrane helices predicted for YE3697 by TMHMM2.0 at aa 7-29%2C 33-50%2C 57-76%2C 86-108%2C115-134%2C 139-161%2C 168-190%2C 205-227%2C 234-256 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4037144	4037212	.	+	.	ID=id6423;Note=10 probable transmembrane helices predicted for YE3697 by TMHMM2.0 at aa 7-29%2C 33-50%2C 57-76%2C 86-108%2C115-134%2C 139-161%2C 168-190%2C 205-227%2C 234-256 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4037255	4037323	.	+	.	ID=id6423;Note=10 probable transmembrane helices predicted for YE3697 by TMHMM2.0 at aa 7-29%2C 33-50%2C 57-76%2C 86-108%2C115-134%2C 139-161%2C 168-190%2C 205-227%2C 234-256 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4037342	4037410	.	+	.	ID=id6423;Note=10 probable transmembrane helices predicted for YE3697 by TMHMM2.0 at aa 7-29%2C 33-50%2C 57-76%2C 86-108%2C115-134%2C 139-161%2C 168-190%2C 205-227%2C 234-256 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4037438	4037506	.	+	.	ID=id6423;Note=10 probable transmembrane helices predicted for YE3697 by TMHMM2.0 at aa 7-29%2C 33-50%2C 57-76%2C 86-108%2C115-134%2C 139-161%2C 168-190%2C 205-227%2C 234-256 and 266-288;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	4036682	4037038	.	+	.	ID=id6424;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 50.9%2C E-value 1.8e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	sequence_feature	4037093	4037485	.	+	.	ID=id6425;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 39.8%2C E-value 4e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00892
AM286415.1	EMBL	gene	4037692	4039713	.	+	.	ID=gene3655;Name=fadH;gbkey=Gene;gene=fadH;gene_biotype=protein_coding;gene_synonym=fadH1;locus_tag=YE3698
AM286415.1	EMBL	CDS	4037692	4039713	.	+	0	ID=cds3555;Parent=gene3655;Dbxref=EnsemblGenomes-Gn:YE3698,EnsemblGenomes-Tr:CAL13725,GOA:A1JR09,InterPro:IPR001155,InterPro:IPR013027,InterPro:IPR013785,InterPro:IPR023753,UniProtKB/TrEMBL:A1JR09,NCBI_GP:CAL13725.1;Name=CAL13725.1;gbkey=CDS;gene=fadH;product=2%2C4-dienoyl-CoA reductase;protein_id=CAL13725.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4037707	4038687	.	+	.	ID=id6426;Note=Pfam match to entry PF00724 oxidored_FMN%2CNADH:flavin oxidoreductase / NADH oxidase family%2C score 415.1%2C E-value 4.2e-122;gbkey=misc_feature;gene=fadH;inference=protein motif:PFAM:PF00724
AM286415.1	EMBL	sequence_feature	4038820	4039698	.	+	.	ID=id6427;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 28.1%2C E-value 6e-08;gbkey=misc_feature;gene=fadH;inference=protein motif:PFAM:PF00070
AM286415.1	EMBL	gene	4039979	4041169	.	-	.	ID=gene3656;Name=YE3699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3699
AM286415.1	EMBL	CDS	4039979	4041169	.	-	0	ID=cds3556;Parent=gene3656;Dbxref=EnsemblGenomes-Gn:YE3699,EnsemblGenomes-Tr:CAL13726,GOA:A1JR10,InterPro:IPR002052,InterPro:IPR007848,InterPro:IPR017237,InterPro:IPR029063,NCBI_GP:CAL13726.1;Name=CAL13726.1;gbkey=CDS;product=putative methyltransferase;protein_id=CAL13726.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4040240	4040260	.	-	.	ID=id6428;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	4041668	4043575	.	+	.	ID=gene3657;Name=YE3700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3700
AM286415.1	EMBL	CDS	4041668	4043575	.	+	0	ID=cds3557;Parent=gene3657;Dbxref=EnsemblGenomes-Gn:YE3700,EnsemblGenomes-Tr:CAL13727,GOA:A1JR12,InterPro:IPR005546,InterPro:IPR006315,UniProtKB/TrEMBL:A1JR12,NCBI_GP:CAL13727.1;Name=CAL13727.1;Note=N-terminus has no significant hits in the databases. C-terminus similar to Yersinia pestis YapG putative autotransporter protein or ypo0587 SWALL:Q9F286 (EMBL:AJ277630) (994 aa) fasta scores: E(): 1.5e-41%2C34.01 38d in 441 aa%2C and to Escherichia coli O157:H7 putative beta-barrel outer membrane protein z0402 or ecs0362 SWALL:Q8X6C1 (EMBL:AE005210) (1349 aa) fasta scores: E(): 1.1e-39%2C 35.93 38d in 359 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ277630;product=Hypothetical protein%2C possible beta-barrel outer membrane protein;protein_id=CAL13727.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4042688	4043572	.	+	.	ID=id6429;Note=Pfam match to entry PF03797 Autotransporter%2CAutotransporter beta-domain%2C score 179.1%2C E-value 4.8e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF03797
AM286415.1	EMBL	gene	4043817	4044320	.	+	.	ID=gene3658;Name=YE3701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3701
AM286415.1	EMBL	CDS	4043817	4044320	.	+	0	ID=cds3558;Parent=gene3658;Dbxref=EnsemblGenomes-Gn:YE3701,EnsemblGenomes-Tr:CAL13728,InterPro:IPR002725,UniProtKB/TrEMBL:A1JR13,NCBI_GP:CAL13728.1;Name=CAL13728.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13728.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4044168	4044230	.	+	.	ID=id6430;Note=Pfam match to entry PF01863 DUF45%2C Protein of unknown function DUF45%2C score 21.9%2C E-value 3.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01863
AM286415.1	EMBL	gene	4044392	4045393	.	+	.	ID=gene3659;Name=YE3702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3702
AM286415.1	EMBL	CDS	4044392	4045393	.	+	0	ID=cds3559;Parent=gene3659;Dbxref=EnsemblGenomes-Gn:YE3702,EnsemblGenomes-Tr:CAL13729,GOA:A1JR14,InterPro:IPR000683,InterPro:IPR016040,UniProtKB/TrEMBL:A1JR14,NCBI_GP:CAL13729.1;Name=CAL13729.1;gbkey=CDS;product=putative MocA-family oxidoreductase;protein_id=CAL13729.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4044395	4044754	.	+	.	ID=id6431;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2COxidoreductase family%2C NAD-binding Rossmann fold%2C score 131.0%2C E-value 1.4e-36;gbkey=misc_feature;inference=protein motif:PFAM:PF01408
AM286415.1	EMBL	transcript	4045482	4045665	.	+	.	ID=rna133;Note=yybP-ykoY element (RF00080) as predicted by Rfam%2Cscore 55.12%2C positions 1 to 124;gbkey=misc_RNA
AM286415.1	EMBL	exon	4045482	4045665	.	+	.	ID=id6432;Parent=rna133;Note=yybP-ykoY element (RF00080) as predicted by Rfam%2Cscore 55.12%2C positions 1 to 124;gbkey=misc_RNA
AM286415.1	EMBL	gene	4045743	4046729	.	+	.	ID=gene3660;Name=YE3703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3703
AM286415.1	EMBL	CDS	4045743	4046729	.	+	0	ID=cds3560;Parent=gene3660;Dbxref=EnsemblGenomes-Gn:YE3703,EnsemblGenomes-Tr:CAL13730,GOA:A1JR16,InterPro:IPR005496,InterPro:IPR022369,UniProtKB/TrEMBL:A1JR16,NCBI_GP:CAL13730.1;Name=CAL13730.1;gbkey=CDS;product=putative drug efflux protein;protein_id=CAL13730.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4045770	4045829	.	+	.	ID=id6433;Note=9 probable transmembrane helices predicted for YE3703 by TMHMM2.0 at aa 10-29%2C 42-64%2C 89-111%2C 116-138%2C143-162%2C 199-221%2C 236-258%2C 265-284 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	4045866	4045934	.	+	.	ID=id6433;Note=9 probable transmembrane helices predicted for YE3703 by TMHMM2.0 at aa 10-29%2C 42-64%2C 89-111%2C 116-138%2C143-162%2C 199-221%2C 236-258%2C 265-284 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	4046007	4046075	.	+	.	ID=id6433;Note=9 probable transmembrane helices predicted for YE3703 by TMHMM2.0 at aa 10-29%2C 42-64%2C 89-111%2C 116-138%2C143-162%2C 199-221%2C 236-258%2C 265-284 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	4046088	4046156	.	+	.	ID=id6433;Note=9 probable transmembrane helices predicted for YE3703 by TMHMM2.0 at aa 10-29%2C 42-64%2C 89-111%2C 116-138%2C143-162%2C 199-221%2C 236-258%2C 265-284 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	4046169	4046228	.	+	.	ID=id6433;Note=9 probable transmembrane helices predicted for YE3703 by TMHMM2.0 at aa 10-29%2C 42-64%2C 89-111%2C 116-138%2C143-162%2C 199-221%2C 236-258%2C 265-284 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	4046337	4046405	.	+	.	ID=id6433;Note=9 probable transmembrane helices predicted for YE3703 by TMHMM2.0 at aa 10-29%2C 42-64%2C 89-111%2C 116-138%2C143-162%2C 199-221%2C 236-258%2C 265-284 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	4046448	4046516	.	+	.	ID=id6433;Note=9 probable transmembrane helices predicted for YE3703 by TMHMM2.0 at aa 10-29%2C 42-64%2C 89-111%2C 116-138%2C143-162%2C 199-221%2C 236-258%2C 265-284 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	4046535	4046594	.	+	.	ID=id6433;Note=9 probable transmembrane helices predicted for YE3703 by TMHMM2.0 at aa 10-29%2C 42-64%2C 89-111%2C 116-138%2C143-162%2C 199-221%2C 236-258%2C 265-284 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	4046607	4046675	.	+	.	ID=id6433;Note=9 probable transmembrane helices predicted for YE3703 by TMHMM2.0 at aa 10-29%2C 42-64%2C 89-111%2C 116-138%2C143-162%2C 199-221%2C 236-258%2C 265-284 and 289-311;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	4045941	4046666	.	+	.	ID=id6434;Note=Pfam match to entry PF03741 TerC%2C Integral membrane protein TerC family%2C score 340.7%2C E-value 1.1e-99;gbkey=misc_feature;inference=protein motif:PFAM:PF03741
AM286415.1	EMBL	gene	4047047	4048303	.	+	.	ID=gene3661;Name=YE3704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3704
AM286415.1	EMBL	CDS	4047047	4048303	.	+	0	ID=cds3561;Parent=gene3661;Dbxref=EnsemblGenomes-Gn:YE3704,EnsemblGenomes-Tr:CAL13731,GOA:A1JR18,InterPro:IPR001991,InterPro:IPR023025,NCBI_GP:CAL13731.1;Name=CAL13731.1;gbkey=CDS;product=putative symporter protein;protein_id=CAL13731.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4047095	4048237	.	+	.	ID=id6435;Note=Pfam match to entry PF00375 SDF%2CSodium:dicarboxylate symporter family%2C score 512.7%2CE-value 1.8e-151;gbkey=misc_feature;inference=protein motif:PFAM:PF00375
AM286415.1	EMBL	sequence_feature	4047107	4047175	.	+	.	ID=id6436;Note=8 probable transmembrane helices predicted for YE3704 by TMHMM2.0 at aa 21-43%2C 48-70%2C 83-105%2C 140-162%2C182-204%2C 214-236%2C 287-309 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	4047188	4047256	.	+	.	ID=id6436;Note=8 probable transmembrane helices predicted for YE3704 by TMHMM2.0 at aa 21-43%2C 48-70%2C 83-105%2C 140-162%2C182-204%2C 214-236%2C 287-309 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	4047293	4047361	.	+	.	ID=id6436;Note=8 probable transmembrane helices predicted for YE3704 by TMHMM2.0 at aa 21-43%2C 48-70%2C 83-105%2C 140-162%2C182-204%2C 214-236%2C 287-309 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	4047464	4047532	.	+	.	ID=id6436;Note=8 probable transmembrane helices predicted for YE3704 by TMHMM2.0 at aa 21-43%2C 48-70%2C 83-105%2C 140-162%2C182-204%2C 214-236%2C 287-309 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	4047590	4047658	.	+	.	ID=id6436;Note=8 probable transmembrane helices predicted for YE3704 by TMHMM2.0 at aa 21-43%2C 48-70%2C 83-105%2C 140-162%2C182-204%2C 214-236%2C 287-309 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	4047686	4047754	.	+	.	ID=id6436;Note=8 probable transmembrane helices predicted for YE3704 by TMHMM2.0 at aa 21-43%2C 48-70%2C 83-105%2C 140-162%2C182-204%2C 214-236%2C 287-309 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	4047905	4047973	.	+	.	ID=id6436;Note=8 probable transmembrane helices predicted for YE3704 by TMHMM2.0 at aa 21-43%2C 48-70%2C 83-105%2C 140-162%2C182-204%2C 214-236%2C 287-309 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	4048031	4048099	.	+	.	ID=id6436;Note=8 probable transmembrane helices predicted for YE3704 by TMHMM2.0 at aa 21-43%2C 48-70%2C 83-105%2C 140-162%2C182-204%2C 214-236%2C 287-309 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	4047686	4047718	.	+	.	ID=id6437;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4047965	4047997	.	+	.	ID=id6438;Note=PS00435 Peroxidases proximal heme-ligand signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00435
AM286415.1	EMBL	sequence_feature	4048028	4048060	.	+	.	ID=id6439;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4048353	4048889	.	-	.	ID=gene3662;Name=YE3705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3705
AM286415.1	EMBL	CDS	4048353	4048889	.	-	0	ID=cds3562;Parent=gene3662;Dbxref=EnsemblGenomes-Gn:YE3705,EnsemblGenomes-Tr:CAL13732,InterPro:IPR019629,InterPro:IPR026267,UniProtKB/TrEMBL:A1JR20,NCBI_GP:CAL13732.1;Name=CAL13732.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13732.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4048821	4048880	.	-	.	ID=id6440;Note=5 probable transmembrane helices predicted for YE3705 by TMHMM2.0 at aa 4-23%2C 36-58%2C 73-90%2C 97-119 and 134-156;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4048716	4048784	.	-	.	ID=id6440;Note=5 probable transmembrane helices predicted for YE3705 by TMHMM2.0 at aa 4-23%2C 36-58%2C 73-90%2C 97-119 and 134-156;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4048620	4048673	.	-	.	ID=id6440;Note=5 probable transmembrane helices predicted for YE3705 by TMHMM2.0 at aa 4-23%2C 36-58%2C 73-90%2C 97-119 and 134-156;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4048533	4048601	.	-	.	ID=id6440;Note=5 probable transmembrane helices predicted for YE3705 by TMHMM2.0 at aa 4-23%2C 36-58%2C 73-90%2C 97-119 and 134-156;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4048422	4048490	.	-	.	ID=id6440;Note=5 probable transmembrane helices predicted for YE3705 by TMHMM2.0 at aa 4-23%2C 36-58%2C 73-90%2C 97-119 and 134-156;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	4048761	4048793	.	-	.	ID=id6441;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4049059	4050549	.	-	.	ID=gene3663;Name=uxaA;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=YE3706
AM286415.1	EMBL	CDS	4049059	4050549	.	-	0	ID=cds3563;Parent=gene3663;Dbxref=EnsemblGenomes-Gn:YE3706,EnsemblGenomes-Tr:CAL13733,GOA:A1JR22,InterPro:IPR007392,InterPro:IPR013974,UniProtKB/TrEMBL:A1JR22,NCBI_GP:CAL13733.1;Name=CAL13733.1;gbkey=CDS;gene=uxaA;product=altronate hydrolase;protein_id=CAL13733.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4049326	4049358	.	-	.	ID=id6442;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=uxaA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4049950	4049982	.	-	.	ID=id6443;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=uxaA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4050560	4052011	.	-	.	ID=gene3664;Name=uxaB;gbkey=Gene;gene=uxaB;gene_biotype=protein_coding;locus_tag=YE3707
AM286415.1	EMBL	CDS	4050560	4052011	.	-	0	ID=cds3564;Parent=gene3664;Dbxref=EnsemblGenomes-Gn:YE3707,EnsemblGenomes-Tr:CAL13734,GOA:A1JR24,InterPro:IPR008927,InterPro:IPR013118,InterPro:IPR013131,InterPro:IPR013328,InterPro:IPR016040,InterPro:IPR023668,NCBI_GP:CAL13734.1;Name=CAL13734.1;gbkey=CDS;gene=uxaB;product=altronate oxidoreductase;protein_id=CAL13734.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4050704	4051966	.	-	.	ID=id6444;Note=Pfam match to entry PF01232 Mannitol_dh%2C Mannitol dehydrogenase%2C score 444.7%2C E-value 5.4e-131;gbkey=misc_feature;gene=uxaB;inference=protein motif:PFAM:PF01232
AM286415.1	EMBL	gene	4052133	4053542	.	-	.	ID=gene3665;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=protein_coding;locus_tag=YE3708
AM286415.1	EMBL	CDS	4052133	4053542	.	-	0	ID=cds3565;Parent=gene3665;Dbxref=EnsemblGenomes-Gn:YE3708,EnsemblGenomes-Tr:CAL13735,GOA:A1JR25,InterPro:IPR003766,InterPro:IPR023177,NCBI_GP:CAL13735.1;Name=CAL13735.1;gbkey=CDS;gene=uxaC;product=uronate isomerase;protein_id=CAL13735.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4052136	4053542	.	-	.	ID=id6445;Note=Pfam match to entry PF02614 UxaC%2C Glucuronate isomerase%2C score 1264.2%2C E-value 0;gbkey=misc_feature;gene=uxaC;inference=protein motif:PFAM:PF02614
AM286415.1	EMBL	gene	4054068	4055372	.	+	.	ID=gene3666;Name=exuT;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=YE3709
AM286415.1	EMBL	CDS	4054068	4055372	.	+	0	ID=cds3566;Parent=gene3666;Dbxref=EnsemblGenomes-Gn:YE3709,EnsemblGenomes-Tr:CAL13736,GOA:A1JR26,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JR26,NCBI_GP:CAL13736.1;Name=CAL13736.1;gbkey=CDS;gene=exuT;product=ExuT transport protein;protein_id=CAL13736.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4054095	4055336	.	+	.	ID=id6446;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -102.0%2C E-value 0.0003;gbkey=misc_feature;gene=exuT;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	4054095	4054148	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	4054209	4054277	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	4054305	4054373	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	4054476	4054544	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	4054557	4054625	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	4054764	4054832	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	4054875	4054943	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	4054980	4055039	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	4055052	4055120	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	4055157	4055225	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	4055238	4055306	.	+	.	ID=id6447;Note=11 probable transmembrane helices predicted for YE3709 by TMHMM2.0 at aa 10-27%2C 48-70%2C 80-102%2C 137-159%2C164-186%2C 233-255%2C 270-292%2C 305-324%2C 329-351%2C 364-386 and 391-413;gbkey=misc_feature;gene=exuT;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	4055612	4056406	.	+	.	ID=gene3667;Name=exuR;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=YE3710
AM286415.1	EMBL	CDS	4055612	4056406	.	+	0	ID=cds3567;Parent=gene3667;Dbxref=EnsemblGenomes-Gn:YE3710,EnsemblGenomes-Tr:CAL13737,GOA:A1JR28,InterPro:IPR000524,InterPro:IPR008920,InterPro:IPR011711,InterPro:IPR011991,UniProtKB/TrEMBL:A1JR28,NCBI_GP:CAL13737.1;Name=CAL13737.1;gbkey=CDS;gene=exuR;product=exu regulon transcriptional regulator;protein_id=CAL13737.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4055648	4055827	.	+	.	ID=id6448;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 105.1%2C E-value 9.1e-29;gbkey=misc_feature;gene=exuR;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	sequence_feature	4055705	4055779	.	+	.	ID=id6449;Note=PS00043 Bacterial regulatory proteins%2C gntR family signature.;gbkey=misc_feature;gene=exuR;inference=protein motif:Prosite:PS00043
AM286415.1	EMBL	gene	4056638	4057153	.	+	.	ID=gene3668;Name=YE3711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3711
AM286415.1	EMBL	CDS	4056638	4057153	.	+	0	ID=cds3568;Parent=gene3668;Dbxref=EnsemblGenomes-Gn:YE3711,EnsemblGenomes-Tr:CAL13738,UniProtKB/TrEMBL:A1JR29,NCBI_GP:CAL13738.1;Name=CAL13738.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL13738.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4056656	4056724	.	+	.	ID=id6450;Note=1 probable transmembrane helix predicted for YE3711 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4057347	4058039	.	+	.	ID=gene3669;Name=yqjA;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=YE3712
AM286415.1	EMBL	CDS	4057347	4058039	.	+	0	ID=cds3569;Parent=gene3669;Dbxref=EnsemblGenomes-Gn:YE3712,EnsemblGenomes-Tr:CAL13739,InterPro:IPR015414,UniProtKB/TrEMBL:A1JR31,NCBI_GP:CAL13739.1;Name=CAL13739.1;gbkey=CDS;gene=yqjA;product=putative DedA-family membrane protein;protein_id=CAL13739.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4057416	4057484	.	+	.	ID=id6451;Note=5 probable transmembrane helices predicted for YE3712 by TMHMM2.0 at aa 24-46%2C 53-75%2C 126-148%2C 155-174 and 189-211;gbkey=misc_feature;gene=yqjA;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4057503	4057571	.	+	.	ID=id6451;Note=5 probable transmembrane helices predicted for YE3712 by TMHMM2.0 at aa 24-46%2C 53-75%2C 126-148%2C 155-174 and 189-211;gbkey=misc_feature;gene=yqjA;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4057722	4057790	.	+	.	ID=id6451;Note=5 probable transmembrane helices predicted for YE3712 by TMHMM2.0 at aa 24-46%2C 53-75%2C 126-148%2C 155-174 and 189-211;gbkey=misc_feature;gene=yqjA;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4057809	4057868	.	+	.	ID=id6451;Note=5 probable transmembrane helices predicted for YE3712 by TMHMM2.0 at aa 24-46%2C 53-75%2C 126-148%2C 155-174 and 189-211;gbkey=misc_feature;gene=yqjA;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4057911	4057979	.	+	.	ID=id6451;Note=5 probable transmembrane helices predicted for YE3712 by TMHMM2.0 at aa 24-46%2C 53-75%2C 126-148%2C 155-174 and 189-211;gbkey=misc_feature;gene=yqjA;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	4057434	4057916	.	+	.	ID=id6452;Note=Pfam match to entry PF00597 DedA%2C DedA family %2Cscore 210.7%2C E-value 1.4e-60;gbkey=misc_feature;gene=yqjA;inference=protein motif:PFAM:PF00597
AM286415.1	EMBL	sequence_feature	4057563	4057595	.	+	.	ID=id6453;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yqjA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4058036	4058425	.	+	.	ID=gene3670;Name=YE3713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3713
AM286415.1	EMBL	CDS	4058036	4058425	.	+	0	ID=cds3570;Parent=gene3670;Dbxref=EnsemblGenomes-Gn:YE3713,EnsemblGenomes-Tr:CAL13740,GOA:A1JR44,InterPro:IPR026574,InterPro:IPR027398,UniProtKB/TrEMBL:A1JR44,NCBI_GP:CAL13740.1;Name=CAL13740.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13740.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4058069	4058137	.	+	.	ID=id6454;Note=1 probable transmembrane helix predicted for YE3713 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4058665	4058997	.	+	.	ID=gene3671;Name=YE3714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3714
AM286415.1	EMBL	CDS	4058665	4058997	.	+	0	ID=cds3571;Parent=gene3671;Dbxref=EnsemblGenomes-Gn:YE3714,EnsemblGenomes-Tr:CAL13741,InterPro:IPR009468,UniProtKB/TrEMBL:A1JR45,NCBI_GP:CAL13741.1;Name=CAL13741.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13741.1;transl_table=11
AM286415.1	EMBL	gene	4059122	4059427	.	+	.	ID=gene3672;Name=yqjD;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=YE3715
AM286415.1	EMBL	CDS	4059122	4059427	.	+	0	ID=cds3572;Parent=gene3672;Dbxref=EnsemblGenomes-Gn:YE3715,EnsemblGenomes-Tr:CAL13742,InterPro:IPR010279,UniProtKB/TrEMBL:A1JR46,NCBI_GP:CAL13742.1;Name=CAL13742.1;gbkey=CDS;gene=yqjD;product=putative membrane protein;protein_id=CAL13742.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4059362	4059415	.	+	.	ID=id6455;Note=1 probable transmembrane helix predicted for YE3715 by TMHMM2.0 at aa 81-98;gbkey=misc_feature;gene=yqjD;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4059430	4059825	.	+	.	ID=gene3673;Name=YE3716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3716
AM286415.1	EMBL	CDS	4059430	4059825	.	+	0	ID=cds3573;Parent=gene3673;Dbxref=EnsemblGenomes-Gn:YE3716,EnsemblGenomes-Tr:CAL13743,InterPro:IPR009937,UniProtKB/TrEMBL:A1JR48,NCBI_GP:CAL13743.1;Name=CAL13743.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13743.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4059589	4059657	.	+	.	ID=id6456;Note=2 probable transmembrane helices predicted for YE3716 by TMHMM2.0 at aa 54-76 and 80-102;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4059667	4059735	.	+	.	ID=id6456;Note=2 probable transmembrane helices predicted for YE3716 by TMHMM2.0 at aa 54-76 and 80-102;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	4059822	4060106	.	+	.	ID=gene3674;Name=YE3717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3717
AM286415.1	EMBL	CDS	4059822	4060106	.	+	0	ID=cds3574;Parent=gene3674;Dbxref=EnsemblGenomes-Gn:YE3717,EnsemblGenomes-Tr:CAL13744,InterPro:IPR025612,UniProtKB/TrEMBL:A1JR50,NCBI_GP:CAL13744.1;Name=CAL13744.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13744.1;transl_table=11
AM286415.1	EMBL	gene	4060558	4060926	.	+	.	ID=gene3675;Name=YE3718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3718
AM286415.1	EMBL	CDS	4060558	4060926	.	+	0	ID=cds3575;Parent=gene3675;Dbxref=EnsemblGenomes-Gn:YE3718,EnsemblGenomes-Tr:CAL13745,InterPro:IPR011637,UniProtKB/TrEMBL:A1JR51,NCBI_GP:CAL13745.1;Name=CAL13745.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13745.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4060570	4060638	.	+	.	ID=id6457;Note=4 probable transmembrane helices predicted for YE3718 by TMHMM2.0 at aa 5-27%2C 37-59%2C 64-82 and 97-119;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	4060666	4060734	.	+	.	ID=id6457;Note=4 probable transmembrane helices predicted for YE3718 by TMHMM2.0 at aa 5-27%2C 37-59%2C 64-82 and 97-119;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	4060747	4060803	.	+	.	ID=id6457;Note=4 probable transmembrane helices predicted for YE3718 by TMHMM2.0 at aa 5-27%2C 37-59%2C 64-82 and 97-119;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	4060846	4060914	.	+	.	ID=id6457;Note=4 probable transmembrane helices predicted for YE3718 by TMHMM2.0 at aa 5-27%2C 37-59%2C 64-82 and 97-119;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	4061010	4062008	.	+	.	ID=gene3676;Name=YE3719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3719
AM286415.1	EMBL	CDS	4061010	4062008	.	+	0	ID=cds3576;Parent=gene3676;Dbxref=EnsemblGenomes-Gn:YE3719,EnsemblGenomes-Tr:CAL13746,InterPro:IPR004045,InterPro:IPR010987,InterPro:IPR012336,InterPro:IPR016639,UniProtKB/TrEMBL:A1JR52,NCBI_GP:CAL13746.1;Name=CAL13746.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13746.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4061616	4061852	.	+	.	ID=id6458;Note=Pfam match to entry PF00043 GST_C%2C Glutathione S-transferase%2C C-terminal domain%2C score 13.4%2C E-value 0.0012;gbkey=misc_feature;inference=protein motif:PFAM:PF00043
AM286415.1	EMBL	gene	4062156	4063052	.	-	.	ID=gene3677;Name=YE3720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3720
AM286415.1	EMBL	CDS	4062156	4063052	.	-	0	ID=cds3577;Parent=gene3677;Dbxref=EnsemblGenomes-Gn:YE3720,EnsemblGenomes-Tr:CAL13747,GOA:A1JR54,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JR54,NCBI_GP:CAL13747.1;Name=CAL13747.1;gbkey=CDS;product=lysR-family transcriptional regulatory protein;protein_id=CAL13747.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4062165	4062779	.	-	.	ID=id6459;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 58.8%2C E-value 7.8e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	4062849	4063028	.	-	.	ID=id6460;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 82.8%2C E-value 4.5e-22;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	4062894	4062986	.	-	.	ID=id6461;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	gene	4063168	4063872	.	+	.	ID=gene3678;Name=YE3721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3721
AM286415.1	EMBL	CDS	4063168	4063872	.	+	0	ID=cds3578;Parent=gene3678;Dbxref=EnsemblGenomes-Gn:YE3721,EnsemblGenomes-Tr:CAL13748,InterPro:IPR003829,InterPro:IPR011051,InterPro:IPR012093,InterPro:IPR014710,UniProtKB/TrEMBL:A1JR56,NCBI_GP:CAL13748.1;Name=CAL13748.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13748.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4063168	4063866	.	+	.	ID=id6462;Note=Pfam match to entry PF02678 DUF209%2C Uncharacterized BCR%2C YhhW family COG1741%2C score 371.6%2C E-value 5.4e-109;gbkey=misc_feature;inference=protein motif:PFAM:PF02678
AM286415.1	EMBL	sequence_feature	4063405	4063428	.	+	.	ID=id6463;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4063938	4064993	.	-	.	ID=gene3679;Name=YE3722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3722
AM286415.1	EMBL	CDS	4063938	4064993	.	-	0	ID=cds3579;Parent=gene3679;Dbxref=EnsemblGenomes-Gn:YE3722,EnsemblGenomes-Tr:CAL13749,GOA:A1JR58,InterPro:IPR002085,InterPro:IPR002328,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR016040,InterPro:IPR029752,UniProtKB/TrEMBL:A1JR58,NCBI_GP:CAL13749.1;Name=CAL13749.1;Note=Similar to Ralstonia solanacearum putative NADP-dependent alcohol dehydrogenase protein Rsc0632 or rs01534 SWALL:Q8Y1Q7 (EMBL:AL646060) (352 aa) fasta scores: E(): 1e-95%2C 67.62 38d in 349 aa%2C and to Pseudomonas aeruginosa probable alcohol dehydrogenase pa2275 SWALL:Q9I1J9 (EMBL:AE004653) (353 aa) fasta scores: E(): 7.3e-95%2C 68.28 38d in 350 aa%2C and to Xylella fastidiosa NADP-alcohol dehydrogenase xf1734 SWALL:Q9PCP4 (EMBL:AE003996) (348 aa) fasta scores: E(): 2.1e-93%2C67.62 38d in 349 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646060;product=Probable NADP-dependent alcohol dehydrogenase;protein_id=CAL13749.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4063956	4064963	.	-	.	ID=id6464;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenase%2C score 352.5%2C E-value 3.1e-103;gbkey=misc_feature;inference=protein motif:PFAM:PF00107
AM286415.1	EMBL	sequence_feature	4064373	4064456	.	-	.	ID=id6465;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00065
AM286415.1	EMBL	sequence_feature	4064763	4064807	.	-	.	ID=id6466;Note=PS00059 Zinc-containing alcohol dehydrogenases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00059
AM286415.1	EMBL	sequence_feature	4064862	4064879	.	-	.	ID=id6467;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	gene	4065125	4066120	.	-	.	ID=gene3680;Name=YE3723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3723
AM286415.1	EMBL	CDS	4065125	4066120	.	-	0	ID=cds3580;Parent=gene3680;Dbxref=EnsemblGenomes-Gn:YE3723,EnsemblGenomes-Tr:CAL13750,InterPro:IPR001395,InterPro:IPR023210,UniProtKB/TrEMBL:A1JR60,NCBI_GP:CAL13750.1;Name=CAL13750.1;gbkey=CDS;product=putative aldo/keto reductase;protein_id=CAL13750.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4065179	4066102	.	-	.	ID=id6468;Note=Pfam match to entry PF00248 aldo_ket_red%2C Aldo/keto reductase family%2C score 249.6%2C E-value 2.7e-72;gbkey=misc_feature;inference=protein motif:PFAM:PF00248
AM286415.1	EMBL	gene	4066304	4067197	.	+	.	ID=gene3681;Name=YE3724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3724
AM286415.1	EMBL	CDS	4066304	4067197	.	+	0	ID=cds3581;Parent=gene3681;Dbxref=EnsemblGenomes-Gn:YE3724,EnsemblGenomes-Tr:CAL13751,GOA:A1JR62,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JR62,NCBI_GP:CAL13751.1;Name=CAL13751.1;gbkey=CDS;product=putative LysR-family transcriptional regulatory protein;protein_id=CAL13751.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4066319	4066498	.	+	.	ID=id6469;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 94.7%2C E-value 1.2e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	4066361	4066453	.	+	.	ID=id6470;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	4066568	4067194	.	+	.	ID=id6471;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 161.6%2C E-value 8.8e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	transcript	4067369	4067671	.	-	.	ID=rna134;Note=RNase P class A (RF00010) as predicted by Rfam%2Cscore 371.77%2C positions 1 to 307;gbkey=misc_RNA
AM286415.1	EMBL	exon	4067369	4067671	.	-	.	ID=id6472;Parent=rna134;Note=RNase P class A (RF00010) as predicted by Rfam%2Cscore 371.77%2C positions 1 to 307;gbkey=misc_RNA
AM286415.1	EMBL	gene	4067751	4068650	.	-	.	ID=gene3682;Name=YE3726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3726
AM286415.1	EMBL	CDS	4067751	4068650	.	-	0	ID=cds3582;Parent=gene3682;Dbxref=EnsemblGenomes-Gn:YE3726,EnsemblGenomes-Tr:CAL13752,GOA:A1JR70,InterPro:IPR000878,InterPro:IPR008189,InterPro:IPR014776,InterPro:IPR014777,InterPro:IPR018063,UniProtKB/TrEMBL:A1JR70,NCBI_GP:CAL13752.1;Name=CAL13752.1;gbkey=CDS;product=putative tetrapyrrole methylase;protein_id=CAL13752.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4068009	4068614	.	-	.	ID=id6473;Note=Pfam match to entry PF00590 TP_methylase%2CTetrapyrrole (Corrin/Porphyrin) Methylases%2C score 231.6%2CE-value 7.3e-67;gbkey=misc_feature;inference=protein motif:PFAM:PF00590
AM286415.1	EMBL	sequence_feature	4068345	4068380	.	-	.	ID=id6474;Note=PS01296 Uncharacterized protein family UPF0011 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01296
AM286415.1	EMBL	gene	4068713	4070686	.	+	.	ID=gene3683;Name=YE3727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3727
AM286415.1	EMBL	CDS	4068713	4070686	.	+	0	ID=cds3583;Parent=gene3683;Dbxref=EnsemblGenomes-Gn:YE3727,EnsemblGenomes-Tr:CAL13753,GOA:A1JR71,InterPro:IPR007443,InterPro:IPR028082,UniProtKB/TrEMBL:A1JR71,NCBI_GP:CAL13753.1;Name=CAL13753.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13753.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4068758	4068790	.	+	.	ID=id6475;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4070730	4071083	.	+	.	ID=gene3684;Name=YE3728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3728
AM286415.1	EMBL	CDS	4070730	4071083	.	+	0	ID=cds3584;Parent=gene3684;Dbxref=EnsemblGenomes-Gn:YE3728,EnsemblGenomes-Tr:CAL13754,GOA:A1JR73,InterPro:IPR003509,InterPro:IPR011335,InterPro:IPR011856,NCBI_GP:CAL13754.1;Name=CAL13754.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13754.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4070754	4071038	.	+	.	ID=id6476;Note=Pfam match to entry PF02021 UPF0102%2CUncharacterised protein family UPF0102%2C score 113.7%2CE-value 2.3e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF02021
AM286415.1	EMBL	gene	4071139	4071729	.	+	.	ID=gene3685;Name=YE3729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3729
AM286415.1	EMBL	CDS	4071139	4071729	.	+	0	ID=cds3585;Parent=gene3685;Dbxref=EnsemblGenomes-Gn:YE3729,EnsemblGenomes-Tr:CAL13755,GOA:A1JR74,InterPro:IPR001347,InterPro:IPR023070,NCBI_GP:CAL13755.1;Name=CAL13755.1;gbkey=CDS;product=probable phosphosugar isomerase;protein_id=CAL13755.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4071241	4071717	.	+	.	ID=id6477;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 160.8%2C E-value 1.5e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	gene	4071740	4072315	.	+	.	ID=gene3686;Name=YE3730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3730
AM286415.1	EMBL	CDS	4071740	4072315	.	+	0	ID=cds3586;Parent=gene3686;Dbxref=EnsemblGenomes-Gn:YE3730,EnsemblGenomes-Tr:CAL13756,InterPro:IPR007055,InterPro:IPR014004,UniProtKB/TrEMBL:A1JR75,NCBI_GP:CAL13756.1;Name=CAL13756.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13756.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4071752	4071820	.	+	.	ID=id6478;Note=1 probable transmembrane helix predicted for YE3730 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	4071764	4071796	.	+	.	ID=id6479;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4072396	4073121	.	-	.	ID=gene3687;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=YE3731
AM286415.1	EMBL	CDS	4072396	4073121	.	-	0	ID=cds3587;Parent=gene3687;Dbxref=EnsemblGenomes-Gn:YE3731,EnsemblGenomes-Tr:CAL13757,GOA:A1JR77,InterPro:IPR001264,InterPro:IPR011812,InterPro:IPR023346,NCBI_GP:CAL13757.1;Name=CAL13757.1;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=CAL13757.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4072486	4072992	.	-	.	ID=id6480;Note=Pfam match to entry PF00912 Transglycosyl%2CTransglycosylase%2C score 265.1%2C E-value 6.1e-77;gbkey=misc_feature;gene=mtgA;inference=protein motif:PFAM:PF00912
AM286415.1	EMBL	sequence_feature	4072993	4073061	.	-	.	ID=id6481;Note=1 probable transmembrane helix predicted for YE3731 by TMHMM2.0 at aa 21-43;gbkey=misc_feature;gene=mtgA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4073118	4073771	.	-	.	ID=gene3688;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;gene_synonym=elb2;locus_tag=YE3732
AM286415.1	EMBL	CDS	4073118	4073771	.	-	0	ID=cds3588;Parent=gene3688;Dbxref=EnsemblGenomes-Gn:YE3732,EnsemblGenomes-Tr:CAL13758,InterPro:IPR002818,InterPro:IPR026041,InterPro:IPR029062,UniProtKB/TrEMBL:A1JR79,NCBI_GP:CAL13758.1;Name=CAL13758.1;gbkey=CDS;gene=elbB;product=enhancing lycopene biosynthesis protein 2;protein_id=CAL13758.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4073163	4073753	.	-	.	ID=id6482;Note=Pfam match to entry PF01965 DJ-1_PfpI%2C DJ-1/PfpI family%2C score 70.2%2C E-value 2.9e-18;gbkey=misc_feature;gene=elbB;inference=protein motif:PFAM:PF01965
AM286415.1	EMBL	gene	4074154	4076490	.	-	.	ID=gene3689;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=YE3733
AM286415.1	EMBL	CDS	4074154	4076490	.	-	0	ID=cds3589;Parent=gene3689;Dbxref=EnsemblGenomes-Gn:YE3733,EnsemblGenomes-Tr:CAL13759,GOA:A1JR80,InterPro:IPR000014,InterPro:IPR000700,InterPro:IPR001610,InterPro:IPR001789,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR008207,InterPro:IPR009082,InterPro:IPR011006,InterPro:IPR013767,InterPro:IPR014409,InterPro:IPR027460,UniProtKB/TrEMBL:A1JR80,NCBI_GP:CAL13759.1;Name=CAL13759.1;gbkey=CDS;gene=arcB;product=aerobic respiration control sensor/response regulatory protein;protein_id=CAL13759.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4074187	4074447	.	-	.	ID=id6483;Note=Pfam match to entry PF01627 Hpt%2C Hpt domain%2C score -14.8%2C E-value 0.0049;gbkey=misc_feature;gene=arcB;inference=protein motif:PFAM:PF01627
AM286415.1	EMBL	sequence_feature	4074553	4074918	.	-	.	ID=id6484;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 123.5%2C E-value 2.5e-34;gbkey=misc_feature;gene=arcB;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	4074973	4075311	.	-	.	ID=id6485;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 144.1%2C E-value 1.6e-40;gbkey=misc_feature;gene=arcB;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	4075450	4075647	.	-	.	ID=id6486;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 77.0%2C E-value 2.5e-20;gbkey=misc_feature;gene=arcB;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	4075684	4075788	.	-	.	ID=id6487;Note=Pfam match to entry PF00785 PAC%2C PAC motif%2C score 16.7%2C E-value 0.00032;gbkey=misc_feature;gene=arcB;inference=protein motif:PFAM:PF00785
AM286415.1	EMBL	sequence_feature	4075834	4076028	.	-	.	ID=id6488;Note=Pfam match to entry PF00989 PAS%2C PAS domain%2C score 45.2%2C E-value 9.9e-11;gbkey=misc_feature;gene=arcB;inference=protein motif:PFAM:PF00989
AM286415.1	EMBL	sequence_feature	4076365	4076433	.	-	.	ID=id6489;Note=2 probable transmembrane helices predicted for YE3733 by TMHMM2.0 at aa 20-42 and 55-77;gbkey=misc_feature;gene=arcB;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4076260	4076328	.	-	.	ID=id6489;Note=2 probable transmembrane helices predicted for YE3733 by TMHMM2.0 at aa 20-42 and 55-77;gbkey=misc_feature;gene=arcB;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	4076786	4077688	.	-	.	ID=gene3690;Name=YE3734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3734
AM286415.1	EMBL	CDS	4076786	4077688	.	-	0	ID=cds3590;Parent=gene3690;Dbxref=EnsemblGenomes-Gn:YE3734,EnsemblGenomes-Tr:CAL13760,GOA:A1JR83,InterPro:IPR005911,InterPro:IPR006638,InterPro:IPR007197,InterPro:IPR023404,UniProtKB/TrEMBL:A1JR83,NCBI_GP:CAL13760.1;Name=CAL13760.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13760.1;transl_table=11
AM286415.1	EMBL	gene	4078236	4082846	.	+	.	ID=gene3691;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;gene_synonym=aspB;locus_tag=YE3735
AM286415.1	EMBL	CDS	4078236	4082846	.	+	0	ID=cds3591;Parent=gene3691;Dbxref=EnsemblGenomes-Gn:YE3735,EnsemblGenomes-Tr:CAL13761,GOA:A1JR84,InterPro:IPR000583,InterPro:IPR002489,InterPro:IPR002932,InterPro:IPR006982,InterPro:IPR013785,InterPro:IPR017932,InterPro:IPR029055,UniProtKB/TrEMBL:A1JR84,NCBI_GP:CAL13761.1;Name=CAL13761.1;gbkey=CDS;gene=gltB;product=glutamate synthase [NADPH] large chain precursor;protein_id=CAL13761.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4078515	4078538	.	+	.	ID=id6490;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=gltB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4080762	4081856	.	+	.	ID=id6491;Note=Pfam match to entry PF01645 Glu_synthase%2C Conserved region in glutamate synthase%2C score 813.6%2C E-value 4.8e-242;gbkey=misc_feature;gene=gltB;inference=protein motif:PFAM:PF01645
AM286415.1	EMBL	sequence_feature	4081659	4081691	.	+	.	ID=id6492;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=gltB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4082082	4082675	.	+	.	ID=id6493;Note=Pfam match to entry PF01493 DUF14%2C Domain of unknown function DUF14%2C score 350.3%2C E-value 1.3e-102;gbkey=misc_feature;gene=gltB;inference=protein motif:PFAM:PF01493
AM286415.1	EMBL	gene	4082856	4084274	.	+	.	ID=gene3692;Name=gltD;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;gene_synonym=aspB;locus_tag=YE3736
AM286415.1	EMBL	CDS	4082856	4084274	.	+	0	ID=cds3592;Parent=gene3692;Dbxref=EnsemblGenomes-Gn:YE3736,EnsemblGenomes-Tr:CAL13762,GOA:A1JR86,InterPro:IPR006006,InterPro:IPR009051,InterPro:IPR016040,InterPro:IPR023753,InterPro:IPR028261,UniProtKB/TrEMBL:A1JR86,NCBI_GP:CAL13762.1;Name=CAL13762.1;gbkey=CDS;gene=gltD;product=glutamate synthase [NADPH] small chain;protein_id=CAL13762.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4083297	4084217	.	+	.	ID=id6494;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 116.3%2CE-value 3.8e-32;gbkey=misc_feature;gene=gltD;inference=protein motif:PFAM:PF00070
AM286415.1	EMBL	sequence_feature	4083306	4083338	.	+	.	ID=id6495;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=gltD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4084540	4085025	.	+	.	ID=gene3693;Name=YE3737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3737
AM286415.1	EMBL	CDS	4084540	4085025	.	+	0	ID=cds3593;Parent=gene3693;Dbxref=EnsemblGenomes-Gn:YE3737,EnsemblGenomes-Tr:CAL13763,UniProtKB/TrEMBL:A1JR88,NCBI_GP:CAL13763.1;Name=CAL13763.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13763.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4084549	4084617	.	+	.	ID=id6496;Note=1 probable transmembrane helix predicted for YE3737 by TMHMM2.0 at aa 4-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4085110	4085625	.	-	.	ID=gene3694;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=YE3738
AM286415.1	EMBL	CDS	4085110	4085625	.	-	0	ID=cds3594;Parent=gene3694;Dbxref=EnsemblGenomes-Gn:YE3738,EnsemblGenomes-Tr:CAL13764,InterPro:IPR007481,UniProtKB/TrEMBL:A1JR89,NCBI_GP:CAL13764.1;Name=CAL13764.1;gbkey=CDS;gene=sspB;product=putative stringent starvation protein B;protein_id=CAL13764.1;transl_table=11
AM286415.1	EMBL	gene	4085631	4086272	.	-	.	ID=gene3695;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;gene_synonym=pog,ssp;locus_tag=YE3739
AM286415.1	EMBL	CDS	4085631	4086272	.	-	0	ID=cds3595;Parent=gene3695;Dbxref=EnsemblGenomes-Gn:YE3739,EnsemblGenomes-Tr:CAL13765,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012336,UniProtKB/TrEMBL:A1JR91,NCBI_GP:CAL13765.1;Name=CAL13765.1;gbkey=CDS;gene=sspA;product=putative stringent starvation protein A;protein_id=CAL13765.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4085691	4086023	.	-	.	ID=id6497;Note=Pfam match to entry PF00043 GST_C%2C Glutathione S-transferase%2C C-terminal domain%2C score 57.8%2C E-value 1.5e-14;gbkey=misc_feature;gene=sspA;inference=protein motif:PFAM:PF00043
AM286415.1	EMBL	sequence_feature	4086030	4086251	.	-	.	ID=id6498;Note=Pfam match to entry PF02798 GST_N%2C Glutathione S-transferase%2C N-terminal domain%2C score 84.8%2C E-value 1.1e-22;gbkey=misc_feature;gene=sspA;inference=protein motif:PFAM:PF02798
AM286415.1	EMBL	gene	4086667	4087059	.	-	.	ID=gene3696;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=YE3740
AM286415.1	EMBL	CDS	4086667	4087059	.	-	0	ID=cds3596;Parent=gene3696;Dbxref=EnsemblGenomes-Gn:YE3740,EnsemblGenomes-Tr:CAL13766,GOA:A1JR92,InterPro:IPR000754,InterPro:IPR014721,InterPro:IPR020568,InterPro:IPR020574,InterPro:IPR023035,NCBI_GP:CAL13766.1;Name=CAL13766.1;gbkey=CDS;gene=rpsI;product=30S ribosomal protein S9;protein_id=CAL13766.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4086670	4087032	.	-	.	ID=id6499;Note=Pfam match to entry PF00380 Ribosomal_S9%2C Ribosomal protein S9/S16%2C score 243.2%2C E-value 2.4e-70;gbkey=misc_feature;gene=rpsI;inference=protein motif:PFAM:PF00380
AM286415.1	EMBL	sequence_feature	4086799	4086855	.	-	.	ID=id6500;Note=PS00360 Ribosomal protein S9 signature.;gbkey=misc_feature;gene=rpsI;inference=protein motif:Prosite:PS00360
AM286415.1	EMBL	gene	4087074	4087502	.	-	.	ID=gene3697;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=YE3741
AM286415.1	EMBL	CDS	4087074	4087502	.	-	0	ID=cds3597;Parent=gene3697;Dbxref=EnsemblGenomes-Gn:YE3741,EnsemblGenomes-Tr:CAL13767,GOA:A1JR94,InterPro:IPR005822,InterPro:IPR005823,InterPro:IPR023563,InterPro:IPR023564,NCBI_GP:CAL13767.1;Name=CAL13767.1;gbkey=CDS;gene=rplM;product=50S ribosomal protein L13;protein_id=CAL13767.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4087077	4087460	.	-	.	ID=id6501;Note=Pfam match to entry PF00572 Ribosomal_L13%2CRibosomal protein L13%2C score 293.4%2C E-value 1.8e-85;gbkey=misc_feature;gene=rplM;inference=protein motif:PFAM:PF00572
AM286415.1	EMBL	sequence_feature	4087122	4087190	.	-	.	ID=id6502;Note=PS00783 Ribosomal protein L13 signature.;gbkey=misc_feature;gene=rplM;inference=protein motif:Prosite:PS00783
AM286415.1	EMBL	gene	4087835	4088962	.	-	.	ID=gene3698;Name=YE3742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3742
AM286415.1	EMBL	CDS	4087835	4088962	.	-	0	ID=cds3598;Parent=gene3698;Dbxref=EnsemblGenomes-Gn:YE3742,EnsemblGenomes-Tr:CAL13768,GOA:A1JR95,InterPro:IPR005654,InterPro:IPR027417,UniProtKB/TrEMBL:A1JR95,NCBI_GP:CAL13768.1;Name=CAL13768.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13768.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4087847	4088929	.	-	.	ID=id6503;Note=Pfam match to entry PF03969 AFG1_ATPase%2C AFG1-like ATPase%2C score 472.8%2C E-value 1.8e-139;gbkey=misc_feature;inference=protein motif:PFAM:PF03969
AM286415.1	EMBL	sequence_feature	4088705	4088728	.	-	.	ID=id6504;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4089186	4089590	.	+	.	ID=gene3699;Name=YE3743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3743
AM286415.1	EMBL	CDS	4089186	4089590	.	+	0	ID=cds3599;Parent=gene3699;Dbxref=EnsemblGenomes-Gn:YE3743,EnsemblGenomes-Tr:CAL13769,InterPro:IPR009386,UniProtKB/TrEMBL:A1JR96,NCBI_GP:CAL13769.1;Name=CAL13769.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13769.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4089198	4089257	.	+	.	ID=id6505;Note=1 probable transmembrane helix predicted for YE3743 by TMHMM2.0 at aa 5-24;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4089861	4091234	.	+	.	ID=gene3700;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;gene_synonym=hhoA;locus_tag=YE3744
AM286415.1	EMBL	CDS	4089861	4091234	.	+	0	ID=cds3600;Parent=gene3700;Dbxref=EnsemblGenomes-Gn:YE3744,EnsemblGenomes-Tr:CAL13770,GOA:A1JR98,InterPro:IPR001478,InterPro:IPR001940,InterPro:IPR009003,InterPro:IPR011782,UniProtKB/TrEMBL:A1JR98,NCBI_GP:CAL13770.1;Name=CAL13770.1;gbkey=CDS;gene=degQ;product=protease;protein_id=CAL13770.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4089879	4089947	.	+	.	ID=id6506;Note=1 probable transmembrane helix predicted for YE3744 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=degQ;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	4090080	4090631	.	+	.	ID=id6507;Note=Pfam match to entry PF00089 trypsin%2C Trypsin %2Cscore 87.4%2C E-value 1.9e-23;gbkey=misc_feature;gene=degQ;inference=protein motif:PFAM:PF00089
AM286415.1	EMBL	sequence_feature	4090635	4090910	.	+	.	ID=id6508;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF)%2C score 81.5%2C E-value 1.1e-21;gbkey=misc_feature;gene=degQ;inference=protein motif:PFAM:PF00595
AM286415.1	EMBL	sequence_feature	4090962	4091204	.	+	.	ID=id6509;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF)%2C score 60.0%2C E-value 3.4e-15;gbkey=misc_feature;gene=degQ;inference=protein motif:PFAM:PF00595
AM286415.1	EMBL	gene	4091323	4092411	.	+	.	ID=gene3701;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;gene_synonym=hhoB,htrH;locus_tag=YE3745
AM286415.1	EMBL	CDS	4091323	4092411	.	+	0	ID=cds3601;Parent=gene3701;Dbxref=EnsemblGenomes-Gn:YE3745,EnsemblGenomes-Tr:CAL13771,GOA:A1JRA0,InterPro:IPR001254,InterPro:IPR001478,InterPro:IPR001940,InterPro:IPR009003,InterPro:IPR011783,UniProtKB/TrEMBL:A1JRA0,NCBI_GP:CAL13771.1;Name=CAL13771.1;gbkey=CDS;gene=degS;product=protease;protein_id=CAL13771.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4091335	4091403	.	+	.	ID=id6510;Note=1 probable transmembrane helix predicted for YE3745 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;gene=degS;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	4091497	4092054	.	+	.	ID=id6511;Note=Pfam match to entry PF00089 trypsin%2C Trypsin %2Cscore 90.3%2C E-value 2.5e-24;gbkey=misc_feature;gene=degS;inference=protein motif:PFAM:PF00089
AM286415.1	EMBL	sequence_feature	4092061	4092333	.	+	.	ID=id6512;Note=Pfam match to entry PF00595 PDZ%2C PDZ domain (Also known as DHR or GLGF)%2C score 62.1%2C E-value 7.7e-16;gbkey=misc_feature;gene=degS;inference=protein motif:PFAM:PF00595
AM286415.1	EMBL	gene	4092490	4093758	.	-	.	ID=gene3702;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;gene_synonym=murZ;locus_tag=YE3746
AM286415.1	EMBL	CDS	4092490	4093758	.	-	0	ID=cds3602;Parent=gene3702;Dbxref=EnsemblGenomes-Gn:YE3746,EnsemblGenomes-Tr:CAL13772,GOA:A1JRA1,InterPro:IPR001986,InterPro:IPR005750,InterPro:IPR013792,NCBI_GP:CAL13772.1;Name=CAL13772.1;gbkey=CDS;gene=murA;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=CAL13772.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4092532	4093743	.	-	.	ID=id6513;Note=Pfam match to entry PF00275 EPSP_syntase%2C EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) %2Cscore 601.3%2C E-value 3.8e-178;gbkey=misc_feature;gene=murA;inference=protein motif:PFAM:PF00275
AM286415.1	EMBL	gene	4093880	4094143	.	-	.	ID=gene3703;Name=YE3747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3747
AM286415.1	EMBL	CDS	4093880	4094143	.	-	0	ID=cds3603;Parent=gene3703;Dbxref=EnsemblGenomes-Gn:YE3747,EnsemblGenomes-Tr:CAL13773,InterPro:IPR002634,UniProtKB/TrEMBL:A1JRA3,NCBI_GP:CAL13773.1;Name=CAL13773.1;gbkey=CDS;product=BolA-like protein;protein_id=CAL13773.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4093910	4094134	.	-	.	ID=id6514;Note=Pfam match to entry PF01722 BolA%2C BolA-like protein%2C score 117.5%2C E-value 1.7e-32;gbkey=misc_feature;inference=protein motif:PFAM:PF01722
AM286415.1	EMBL	gene	4094309	4094632	.	-	.	ID=gene3704;Name=YE3748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3748
AM286415.1	EMBL	CDS	4094309	4094632	.	-	0	ID=cds3604;Parent=gene3704;Dbxref=EnsemblGenomes-Gn:YE3748,EnsemblGenomes-Tr:CAL13774,InterPro:IPR002645,UniProtKB/TrEMBL:A1JRA4,NCBI_GP:CAL13774.1;Name=CAL13774.1;gbkey=CDS;product=putative anti-sigma B factor antagonist;protein_id=CAL13774.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4094315	4094623	.	-	.	ID=id6515;Note=Pfam match to entry PF01740 STAS%2C STAS domain %2Cscore 50.8%2C E-value 2e-12;gbkey=misc_feature;inference=protein motif:PFAM:PF01740
AM286415.1	EMBL	gene	4094635	4095261	.	-	.	ID=gene3705;Name=yrbC;gbkey=Gene;gene=yrbC;gene_biotype=protein_coding;locus_tag=YE3749
AM286415.1	EMBL	CDS	4094635	4095261	.	-	0	ID=cds3605;Parent=gene3705;Dbxref=EnsemblGenomes-Gn:YE3749,EnsemblGenomes-Tr:CAL13775,InterPro:IPR008869,InterPro:IPR023094,UniProtKB/TrEMBL:A1JRA6,NCBI_GP:CAL13775.1;Name=CAL13775.1;gbkey=CDS;gene=yrbC;product=putative exported protein;protein_id=CAL13775.1;transl_table=11
AM286415.1	EMBL	gene	4095274	4095834	.	-	.	ID=gene3706;Name=yrbD;gbkey=Gene;gene=yrbD;gene_biotype=protein_coding;locus_tag=YE3750
AM286415.1	EMBL	CDS	4095274	4095834	.	-	0	ID=cds3606;Parent=gene3706;Dbxref=EnsemblGenomes-Gn:YE3750,EnsemblGenomes-Tr:CAL13776,InterPro:IPR003399,UniProtKB/TrEMBL:A1JRA7,NCBI_GP:CAL13776.1;Name=CAL13776.1;gbkey=CDS;gene=yrbD;product=putative membrane protein;protein_id=CAL13776.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4095364	4095807	.	-	.	ID=id6516;Note=Pfam match to entry PF02470 mce%2C mce related protein%2C score 147.8%2C E-value 1.3e-41;gbkey=misc_feature;gene=yrbD;inference=protein motif:PFAM:PF02470
AM286415.1	EMBL	sequence_feature	4095742	4095810	.	-	.	ID=id6517;Note=1 probable transmembrane helix predicted for YE3750 by TMHMM2.0 at aa 9-31;gbkey=misc_feature;gene=yrbD;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4095839	4096621	.	-	.	ID=gene3707;Name=yrbE;gbkey=Gene;gene=yrbE;gene_biotype=protein_coding;locus_tag=YE3751
AM286415.1	EMBL	CDS	4095839	4096621	.	-	0	ID=cds3607;Parent=gene3707;Dbxref=EnsemblGenomes-Gn:YE3751,EnsemblGenomes-Tr:CAL13777,InterPro:IPR003453,UniProtKB/TrEMBL:A1JRA9,NCBI_GP:CAL13777.1;Name=CAL13777.1;gbkey=CDS;gene=yrbE;product=putative membrane protein;protein_id=CAL13777.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4096517	4096585	.	-	.	ID=id6518;Note=5 probable transmembrane helices predicted for YE3751 by TMHMM2.0 at aa 13-35%2C 50-72%2C 148-170%2C 197-219 and 239-258;gbkey=misc_feature;gene=yrbE;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4096406	4096474	.	-	.	ID=id6518;Note=5 probable transmembrane helices predicted for YE3751 by TMHMM2.0 at aa 13-35%2C 50-72%2C 148-170%2C 197-219 and 239-258;gbkey=misc_feature;gene=yrbE;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4096112	4096180	.	-	.	ID=id6518;Note=5 probable transmembrane helices predicted for YE3751 by TMHMM2.0 at aa 13-35%2C 50-72%2C 148-170%2C 197-219 and 239-258;gbkey=misc_feature;gene=yrbE;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4095965	4096033	.	-	.	ID=id6518;Note=5 probable transmembrane helices predicted for YE3751 by TMHMM2.0 at aa 13-35%2C 50-72%2C 148-170%2C 197-219 and 239-258;gbkey=misc_feature;gene=yrbE;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4095848	4095907	.	-	.	ID=id6518;Note=5 probable transmembrane helices predicted for YE3751 by TMHMM2.0 at aa 13-35%2C 50-72%2C 148-170%2C 197-219 and 239-258;gbkey=misc_feature;gene=yrbE;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	4095848	4096585	.	-	.	ID=id6519;Note=Pfam match to entry PF02405 DUF140%2C Domain of unknown function DUF140%2C score 430.3%2C E-value 1.2e-126;gbkey=misc_feature;gene=yrbE;inference=protein motif:PFAM:PF02405
AM286415.1	EMBL	gene	4096636	4097418	.	-	.	ID=gene3708;Name=yrbF;gbkey=Gene;gene=yrbF;gene_biotype=protein_coding;locus_tag=YE3752
AM286415.1	EMBL	CDS	4096636	4097418	.	-	0	ID=cds3608;Parent=gene3708;Dbxref=EnsemblGenomes-Gn:YE3752,EnsemblGenomes-Tr:CAL13778,GOA:A1JRB0,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JRB0,NCBI_GP:CAL13778.1;Name=CAL13778.1;gbkey=CDS;gene=yrbF;product=putative ABC transporter ATP-binding protein;protein_id=CAL13778.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4096777	4097340	.	-	.	ID=id6520;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 191.9%2C E-value 6.6e-55;gbkey=misc_feature;gene=yrbF;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4096963	4097007	.	-	.	ID=id6521;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=yrbF;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	4097296	4097319	.	-	.	ID=id6522;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=yrbF;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4097845	4098819	.	+	.	ID=gene3709;Name=yrbG;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=YE3753
AM286415.1	EMBL	CDS	4097845	4098819	.	+	0	ID=cds3609;Parent=gene3709;Dbxref=EnsemblGenomes-Gn:YE3753,EnsemblGenomes-Tr:CAL13779,GOA:A1JRB2,InterPro:IPR004481,InterPro:IPR004837,UniProtKB/TrEMBL:A1JRB2,NCBI_GP:CAL13779.1;Name=CAL13779.1;gbkey=CDS;gene=yrbG;product=putative sodium/calcium exchanger protein;protein_id=CAL13779.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4097848	4097901	.	+	.	ID=id6523;Note=9 probable transmembrane helices predicted for YE3753 by TMHMM2.0 at aa 2-19%2C 34-56%2C 69-91%2C 130-152%2C173-195%2C 210-232%2C 239-261%2C 276-293 and 300-322;gbkey=misc_feature;gene=yrbG;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	4097944	4098012	.	+	.	ID=id6523;Note=9 probable transmembrane helices predicted for YE3753 by TMHMM2.0 at aa 2-19%2C 34-56%2C 69-91%2C 130-152%2C173-195%2C 210-232%2C 239-261%2C 276-293 and 300-322;gbkey=misc_feature;gene=yrbG;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	4098049	4098117	.	+	.	ID=id6523;Note=9 probable transmembrane helices predicted for YE3753 by TMHMM2.0 at aa 2-19%2C 34-56%2C 69-91%2C 130-152%2C173-195%2C 210-232%2C 239-261%2C 276-293 and 300-322;gbkey=misc_feature;gene=yrbG;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	4098232	4098300	.	+	.	ID=id6523;Note=9 probable transmembrane helices predicted for YE3753 by TMHMM2.0 at aa 2-19%2C 34-56%2C 69-91%2C 130-152%2C173-195%2C 210-232%2C 239-261%2C 276-293 and 300-322;gbkey=misc_feature;gene=yrbG;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	4098361	4098429	.	+	.	ID=id6523;Note=9 probable transmembrane helices predicted for YE3753 by TMHMM2.0 at aa 2-19%2C 34-56%2C 69-91%2C 130-152%2C173-195%2C 210-232%2C 239-261%2C 276-293 and 300-322;gbkey=misc_feature;gene=yrbG;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	4098472	4098540	.	+	.	ID=id6523;Note=9 probable transmembrane helices predicted for YE3753 by TMHMM2.0 at aa 2-19%2C 34-56%2C 69-91%2C 130-152%2C173-195%2C 210-232%2C 239-261%2C 276-293 and 300-322;gbkey=misc_feature;gene=yrbG;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	4098559	4098627	.	+	.	ID=id6523;Note=9 probable transmembrane helices predicted for YE3753 by TMHMM2.0 at aa 2-19%2C 34-56%2C 69-91%2C 130-152%2C173-195%2C 210-232%2C 239-261%2C 276-293 and 300-322;gbkey=misc_feature;gene=yrbG;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	4098670	4098723	.	+	.	ID=id6523;Note=9 probable transmembrane helices predicted for YE3753 by TMHMM2.0 at aa 2-19%2C 34-56%2C 69-91%2C 130-152%2C173-195%2C 210-232%2C 239-261%2C 276-293 and 300-322;gbkey=misc_feature;gene=yrbG;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	4098742	4098810	.	+	.	ID=id6523;Note=9 probable transmembrane helices predicted for YE3753 by TMHMM2.0 at aa 2-19%2C 34-56%2C 69-91%2C 130-152%2C173-195%2C 210-232%2C 239-261%2C 276-293 and 300-322;gbkey=misc_feature;gene=yrbG;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	4097881	4098297	.	+	.	ID=id6524;Note=Pfam match to entry PF01699 Na_Ca_Ex%2CSodium/calcium exchanger protein%2C score 148.3%2C E-value 8.8e-42;gbkey=misc_feature;gene=yrbG;inference=protein motif:PFAM:PF01699
AM286415.1	EMBL	sequence_feature	4098394	4098816	.	+	.	ID=id6525;Note=Pfam match to entry PF01699 Na_Ca_Ex%2CSodium/calcium exchanger protein%2C score 160.3%2C E-value 2.1e-45;gbkey=misc_feature;gene=yrbG;inference=protein motif:PFAM:PF01699
AM286415.1	EMBL	gene	4098877	4099854	.	+	.	ID=gene3710;Name=YE3754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3754
AM286415.1	EMBL	CDS	4098877	4099854	.	+	0	ID=cds3610;Parent=gene3710;Dbxref=EnsemblGenomes-Gn:YE3754,EnsemblGenomes-Tr:CAL13780,GOA:A1JRC0,InterPro:IPR000644,InterPro:IPR001347,InterPro:IPR004800,UniProtKB/TrEMBL:A1JRC0,NCBI_GP:CAL13780.1;Name=CAL13780.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13780.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4098994	4099398	.	+	.	ID=id6526;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 134.6%2C E-value 1.2e-37;gbkey=misc_feature;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	sequence_feature	4099495	4099656	.	+	.	ID=id6527;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 32.6%2C E-value 5.8e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	sequence_feature	4099690	4099848	.	+	.	ID=id6528;Note=Pfam match to entry PF00571 CBS%2C CBS domain%2C score 45.4%2C E-value 8.4e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00571
AM286415.1	EMBL	gene	4099868	4100431	.	+	.	ID=gene3711;Name=YE3755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3755
AM286415.1	EMBL	CDS	4099868	4100431	.	+	0	ID=cds3611;Parent=gene3711;Dbxref=EnsemblGenomes-Gn:YE3755,EnsemblGenomes-Tr:CAL13781,GOA:A1JRC2,InterPro:IPR010023,InterPro:IPR023214,UniProtKB/TrEMBL:A1JRC2,NCBI_GP:CAL13781.1;Name=CAL13781.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13781.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4100048	4100302	.	+	.	ID=id6529;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 16.9%2C E-value 0.00017;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	4100428	4100991	.	+	.	ID=gene3712;Name=yrbK;gbkey=Gene;gene=yrbK;gene_biotype=protein_coding;locus_tag=YE3756
AM286415.1	EMBL	CDS	4100428	4100991	.	+	0	ID=cds3612;Parent=gene3712;Dbxref=EnsemblGenomes-Gn:YE3756,EnsemblGenomes-Tr:CAL13782,GOA:A1JRC3,InterPro:IPR010664,InterPro:IPR026265,UniProtKB/TrEMBL:A1JRC3,NCBI_GP:CAL13782.1;Name=CAL13782.1;gbkey=CDS;gene=yrbK;product=putative exported protein;protein_id=CAL13782.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4100440	4100508	.	+	.	ID=id6530;Note=1 probable transmembrane helix predicted for YE3756 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;gene=yrbK;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4100975	4101520	.	+	.	ID=gene3713;Name=YE3757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3757
AM286415.1	EMBL	CDS	4100975	4101520	.	+	0	ID=cds3613;Parent=gene3713;Dbxref=EnsemblGenomes-Gn:YE3757,EnsemblGenomes-Tr:CAL13783,GOA:A1JRC5,InterPro:IPR005653,InterPro:IPR014340,UniProtKB/TrEMBL:A1JRC5,NCBI_GP:CAL13783.1;Name=CAL13783.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13783.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4100993	4101052	.	+	.	ID=id6531;Note=1 probable transmembrane helix predicted for YE3757 by TMHMM2.0 at aa 7-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	4101014	4101475	.	+	.	ID=id6532;Note=Pfam match to entry PF03968 OstA%2C OstA-like protein%2C score 181.1%2C E-value 1.2e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF03968
AM286415.1	EMBL	gene	4101527	4102252	.	+	.	ID=gene3714;Name=yhbG;gbkey=Gene;gene=yhbG;gene_biotype=protein_coding;locus_tag=YE3758
AM286415.1	EMBL	CDS	4101527	4102252	.	+	0	ID=cds3614;Parent=gene3714;Dbxref=EnsemblGenomes-Gn:YE3758,EnsemblGenomes-Tr:CAL13784,GOA:A1JRC6,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JRC6,NCBI_GP:CAL13784.1;Name=CAL13784.1;gbkey=CDS;gene=yhbG;product=probable ABC transporter ATP-binding protein;protein_id=CAL13784.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4101611	4102165	.	+	.	ID=id6533;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 220.4%2C E-value 1.7e-63;gbkey=misc_feature;gene=yhbG;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4101632	4101655	.	+	.	ID=id6534;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=yhbG;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4101938	4101982	.	+	.	ID=id6535;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=yhbG;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	4102315	4103748	.	+	.	ID=gene3715;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;gene_synonym=glnF,ntrA;locus_tag=YE3759
AM286415.1	EMBL	CDS	4102315	4103748	.	+	0	ID=cds3615;Parent=gene3715;Dbxref=EnsemblGenomes-Gn:YE3759,EnsemblGenomes-Tr:CAL13785,GOA:A1JRC8,InterPro:IPR000394,InterPro:IPR007046,InterPro:IPR007634,UniProtKB/TrEMBL:A1JRC8,NCBI_GP:CAL13785.1;Name=CAL13785.1;gbkey=CDS;gene=rpoN;product=RNA polymerase sigma-54 factor;protein_id=CAL13785.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4102315	4103739	.	+	.	ID=id6536;Note=Pfam match to entry PF00309 Sigma54_factors%2CSigma-54 factors family%2C score 894.0%2C E-value 3e-266;gbkey=misc_feature;gene=rpoN;inference=protein motif:PFAM:PF00309
AM286415.1	EMBL	sequence_feature	4102330	4102449	.	+	.	ID=id6537;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=rpoN;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	4103404	4103463	.	+	.	ID=id6538;Note=PS00717 Sigma-54 factors family signature 1.;gbkey=misc_feature;gene=rpoN;inference=protein motif:Prosite:PS00717
AM286415.1	EMBL	sequence_feature	4103677	4103700	.	+	.	ID=id6539;Note=PS00718 Sigma-54 factors family signature 2.;gbkey=misc_feature;gene=rpoN;inference=protein motif:Prosite:PS00718
AM286415.1	EMBL	gene	4103772	4104059	.	+	.	ID=gene3716;Name=yhbH;gbkey=Gene;gene=yhbH;gene_biotype=protein_coding;locus_tag=YE3760
AM286415.1	EMBL	CDS	4103772	4104059	.	+	0	ID=cds3616;Parent=gene3716;Dbxref=EnsemblGenomes-Gn:YE3760,EnsemblGenomes-Tr:CAL13786,GOA:A1JRC9,InterPro:IPR003489,UniProtKB/TrEMBL:A1JRC9,NCBI_GP:CAL13786.1;Name=CAL13786.1;gbkey=CDS;gene=yhbH;product=probable sigma (54) modulation protein;protein_id=CAL13786.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4103775	4104056	.	+	.	ID=id6540;Note=Pfam match to entry PF02482 Ribosomal_S30%2C Sigma 54 modulation protein / S30EA ribosomal protein%2C score 191.4%2C E-value 9e-55;gbkey=misc_feature;gene=yhbH;inference=protein motif:PFAM:PF02482
AM286415.1	EMBL	gene	4104230	4104712	.	+	.	ID=gene3717;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;gene_synonym=rpoP;locus_tag=YE3761
AM286415.1	EMBL	CDS	4104230	4104712	.	+	0	ID=cds3617;Parent=gene3717;Dbxref=EnsemblGenomes-Gn:YE3761,EnsemblGenomes-Tr:CAL13787,GOA:A1JRD1,InterPro:IPR002178,InterPro:IPR006320,InterPro:IPR016152,UniProtKB/TrEMBL:A1JRD1,NCBI_GP:CAL13787.1;Name=CAL13787.1;gbkey=CDS;gene=ptsN;product=nitrogen regulatory IIA protein;protein_id=CAL13787.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4104260	4104694	.	+	.	ID=id6541;Note=Pfam match to entry PF00359 PTS_EIIA_2%2CPhosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2%2C score 199.8%2C E-value 2.8e-57;gbkey=misc_feature;gene=ptsN;inference=protein motif:PFAM:PF00359
AM286415.1	EMBL	sequence_feature	4104398	4104448	.	+	.	ID=id6542;Note=PS00372 PTS EIIA domains phosphorylation site signature 2.;gbkey=misc_feature;gene=ptsN;inference=protein motif:Prosite:PS00372
AM286415.1	EMBL	gene	4104791	4105642	.	+	.	ID=gene3718;Name=YE3762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3762
AM286415.1	EMBL	CDS	4104791	4105642	.	+	0	ID=cds3618;Parent=gene3718;Dbxref=EnsemblGenomes-Gn:YE3762,EnsemblGenomes-Tr:CAL13788,GOA:A1JRD2,InterPro:IPR005337,InterPro:IPR027417,NCBI_GP:CAL13788.1;Name=CAL13788.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13788.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4104791	4105636	.	+	.	ID=id6543;Note=Pfam match to entry PF03668 UPF0042%2CUncharacterised P-loop ATPase protein family (UPF0042) %2Cscore 709.8%2C E-value 8.1e-211;gbkey=misc_feature;inference=protein motif:PFAM:PF03668
AM286415.1	EMBL	sequence_feature	4104812	4104835	.	+	.	ID=id6544;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4105643	4105915	.	+	.	ID=gene3719;Name=ptsO;gbkey=Gene;gene=ptsO;gene_biotype=protein_coding;gene_synonym=npr,rpoR;locus_tag=YE3763
AM286415.1	EMBL	CDS	4105643	4105915	.	+	0	ID=cds3619;Parent=gene3719;Dbxref=EnsemblGenomes-Gn:YE3763,EnsemblGenomes-Tr:CAL13789,GOA:A1JRD3,InterPro:IPR000032,InterPro:IPR001020,UniProtKB/TrEMBL:A1JRD3,NCBI_GP:CAL13789.1;Name=CAL13789.1;gbkey=CDS;gene=ptsO;product=putative phosphocarrier protein;protein_id=CAL13789.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4105646	4105900	.	+	.	ID=id6545;Note=Pfam match to entry PF00381 PTS-HPr%2C PTS HPr component phosphorylation site%2C score 133.0%2C E-value 3.4e-37;gbkey=misc_feature;gene=ptsO;inference=protein motif:PFAM:PF00381
AM286415.1	EMBL	sequence_feature	4105682	4105705	.	+	.	ID=id6546;Note=PS00369 PTS HPR component histidine phosphorylation site signature.;gbkey=misc_feature;gene=ptsO;inference=protein motif:Prosite:PS00369
AM286415.1	EMBL	gene	4107093	4108028	.	+	.	ID=gene3720;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=YE3766
AM286415.1	EMBL	CDS	4107093	4108028	.	+	0	ID=cds3620;Parent=gene3720;Dbxref=EnsemblGenomes-Gn:YE3766,EnsemblGenomes-Tr:CAL13790,GOA:A1JRD5,InterPro:IPR002082,InterPro:IPR006130,InterPro:IPR006131,InterPro:IPR006132,NCBI_GP:CAL13790.1;Name=CAL13790.1;gbkey=CDS;gene=pyrB;product=aspartate carbamoyltransferase catalytic subunit;protein_id=CAL13790.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4107114	4107542	.	+	.	ID=id6547;Note=Pfam match to entry PF02729 OTCace_N%2CAspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%2C score 248.1%2C E-value 8e-72;gbkey=misc_feature;gene=pyrB;inference=protein motif:PFAM:PF02729
AM286415.1	EMBL	sequence_feature	4107237	4107260	.	+	.	ID=id6548;Note=PS00097 Aspartate and ornithine carbamoyltransferases signature.;gbkey=misc_feature;gene=pyrB;inference=protein motif:Prosite:PS00097
AM286415.1	EMBL	sequence_feature	4107549	4108007	.	+	.	ID=id6549;Note=Pfam match to entry PF00185 OTCace%2CAspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain%2C score 206.8%2C E-value 2.2e-59;gbkey=misc_feature;gene=pyrB;inference=protein motif:PFAM:PF00185
AM286415.1	EMBL	gene	4108040	4108504	.	+	.	ID=gene3721;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=YE3767
AM286415.1	EMBL	CDS	4108040	4108504	.	+	0	ID=cds3621;Parent=gene3721;Dbxref=EnsemblGenomes-Gn:YE3767,EnsemblGenomes-Tr:CAL13791,GOA:A1JRD6,InterPro:IPR002801,InterPro:IPR020542,InterPro:IPR020545,NCBI_GP:CAL13791.1;Name=CAL13791.1;gbkey=CDS;gene=pyrI;product=aspartate carbamoyltransferase regulatory chain;protein_id=CAL13791.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4108043	4108336	.	+	.	ID=id6550;Note=Pfam match to entry PF01948 PyrI%2C Aspartate carbamoyltransferase regulatory chain%2C allosteric domain %2Cscore 214.7%2C E-value 8.9e-62;gbkey=misc_feature;gene=pyrI;inference=protein motif:PFAM:PF01948
AM286415.1	EMBL	sequence_feature	4108340	4108495	.	+	.	ID=id6551;Note=Pfam match to entry PF02748 PyrI_C%2C Aspartate carbamoyltransferase regulatory chain%2C metal binding domain%2C score 110.4%2C E-value 2.2e-30;gbkey=misc_feature;gene=pyrI;inference=protein motif:PFAM:PF02748
AM286415.1	EMBL	gene	4109020	4109406	.	+	.	ID=gene3722;Name=YE3768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3768
AM286415.1	EMBL	CDS	4109020	4109406	.	+	0	ID=cds3622;Parent=gene3722;Dbxref=EnsemblGenomes-Gn:YE3768,EnsemblGenomes-Tr:CAL13792,GOA:A1JRD8,InterPro:IPR006056,InterPro:IPR006175,InterPro:IPR013813,InterPro:IPR019897,UniProtKB/TrEMBL:A1JRD8,NCBI_GP:CAL13792.1;Name=CAL13792.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13792.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4109038	4109400	.	+	.	ID=id6552;Note=Pfam match to entry PF01042 UPF0076%2CEndoribonuclease L-PSP%2C score 216.9%2C E-value 2e-62;gbkey=misc_feature;inference=protein motif:PFAM:PF01042
AM286415.1	EMBL	sequence_feature	4109326	4109382	.	+	.	ID=id6553;Note=PS01094 Uncharacterized protein family UPF0076 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01094
AM286415.1	EMBL	gene	4109674	4111110	.	+	.	ID=gene3723;Name=YE3769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3769
AM286415.1	EMBL	CDS	4109674	4111110	.	+	0	ID=cds3623;Parent=gene3723;Dbxref=EnsemblGenomes-Gn:YE3769,EnsemblGenomes-Tr:CAL13793,InterPro:IPR007302,InterPro:IPR016450,UniProtKB/TrEMBL:A1JRE0,NCBI_GP:CAL13793.1;Name=CAL13793.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa1730 SWALL:Q9I307 (EMBL:AE004599) (470 aa) fasta scores: E(): 2.2e-134%2C 69.52 38d in 466 aa%2C and to Ralstonia solanacearum hypothetical protein Rsc1121 or rs04633 SWALL:Q8Y0C3 (EMBL:AL646062) (507 aa) fasta scores: E(): 1.5e-130%2C 68.81 38d in 465 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646062;product=conserved hypothetical protein;protein_id=CAL13793.1;transl_table=11
AM286415.1	EMBL	gene	4111104	4112033	.	+	.	ID=gene3724;Name=YE3770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3770
AM286415.1	EMBL	CDS	4111104	4112033	.	+	0	ID=cds3624;Parent=gene3724;Dbxref=EnsemblGenomes-Gn:YE3770,EnsemblGenomes-Tr:CAL13794,InterPro:IPR007296,UniProtKB/TrEMBL:A1JRE1,NCBI_GP:CAL13794.1;Name=CAL13794.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa1731 SWALL:Q9I306 (EMBL:AE004599) (317 aa) fasta scores: E(): 1.1e-51%2C 45.71 38d in 315 aa%2C and to Ralstonia solanacearum hypothetical protein Rsc1122 or rs04632 SWALL:Q8Y0C2 (EMBL:AL646062) (316 aa) fasta scores: E(): 2e-46%2C 43.87 38d in 310 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646062;product=Conserved hypothetical protein;protein_id=CAL13794.1;transl_table=11
AM286415.1	EMBL	gene	4112030	4112851	.	+	.	ID=gene3725;Name=YE3771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3771
AM286415.1	EMBL	CDS	4112030	4112851	.	+	0	ID=cds3625;Parent=gene3725;Dbxref=EnsemblGenomes-Gn:YE3771,EnsemblGenomes-Tr:CAL13795,InterPro:IPR002931,InterPro:IPR013589,UniProtKB/TrEMBL:A1JRE2,NCBI_GP:CAL13795.1;Name=CAL13795.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa1732 pa1732 SWALL:Q9I305 (EMBL:AE004599) (266 aa) fasta scores: E(): 4e-54%2C 52.74 38d in 273 aa%2C and to Ralstonia solanacearum hypothetical protein Rsc1123 rsc1123 or rs04630 SWALL:Q8Y0C1 (EMBL:AL646062) (292 aa) fasta scores: E(): 1.4e-35%2C 40.65 38d in 273 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646062;product=Conserved hypothetical protein;protein_id=CAL13795.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4112510	4112686	.	+	.	ID=id6554;Note=Pfam match to entry PF01841 Transglut_core%2CTransglutaminase-like superfamily%2C score 69.9%2C E-value 3.5e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF01841
AM286415.1	EMBL	gene	4112875	4113609	.	+	.	ID=gene3726;Name=YE3772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3772
AM286415.1	EMBL	CDS	4112875	4113609	.	+	0	ID=cds3626;Parent=gene3726;Dbxref=EnsemblGenomes-Gn:YE3772,EnsemblGenomes-Tr:CAL13796,GOA:A1JRE3,InterPro:IPR001353,InterPro:IPR016545,InterPro:IPR029055,UniProtKB/TrEMBL:A1JRE3,NCBI_GP:CAL13796.1;Name=CAL13796.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa1733 pa1733 SWALL:Q9I304 (EMBL:AE004599) (243 aa) fasta scores: E(): 9e-56%2C 59.24 38d in 238 aa%2C and to Ralstonia solanacearum hypothetical protein Rsc1124 rsc1124 or rs04629 SWALL:Q8Y0C0 (EMBL:AL646062) (304 aa) fasta scores: E(): 2.2e-47%2C 52.65 38d in 245 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646062;product=Hypothetical exported protein;protein_id=CAL13796.1;transl_table=11
AM286415.1	EMBL	gene	4113996	4115657	.	-	.	ID=gene3727;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;gene_synonym=olgH;locus_tag=YE3773
AM286415.1	EMBL	CDS	4113996	4115657	.	-	0	ID=cds3627;Parent=gene3727;Dbxref=EnsemblGenomes-Gn:YE3773,EnsemblGenomes-Tr:CAL13797,GOA:A1JRE4,InterPro:IPR006047,InterPro:IPR006589,InterPro:IPR012769,InterPro:IPR013780,InterPro:IPR013781,InterPro:IPR015902,InterPro:IPR017853,InterPro:IPR022567,UniProtKB/TrEMBL:A1JRE4,NCBI_GP:CAL13797.1;Name=CAL13797.1;gbkey=CDS;gene=treC;product=putative trehalose-6-phosphate hydrolase;protein_id=CAL13797.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4114416	4115612	.	-	.	ID=id6555;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C catalytic domain%2C score 463.9%2C E-value 8.8e-137;gbkey=misc_feature;gene=treC;inference=protein motif:PFAM:PF00128
AM286415.1	EMBL	gene	4115725	4117140	.	-	.	ID=gene3728;Name=treB;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=YE3774
AM286415.1	EMBL	CDS	4115725	4117140	.	-	0	ID=cds3628;Parent=gene3728;Dbxref=EnsemblGenomes-Gn:YE3774,EnsemblGenomes-Tr:CAL13798,GOA:A1JRE6,InterPro:IPR001996,InterPro:IPR003352,InterPro:IPR011296,InterPro:IPR013013,InterPro:IPR018113,UniProtKB/TrEMBL:A1JRE6,NCBI_GP:CAL13798.1;Name=CAL13798.1;gbkey=CDS;gene=treB;product=PTS system%2C trehalose-specific IIBC component;protein_id=CAL13798.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4116736	4116804	.	-	.	ID=id6556;Note=10 probable transmembrane helices predicted for YE3774 by TMHMM2.0 at aa 113-135%2C 155-177%2C 184-206%2C226-244%2C 256-278%2C 298-320%2C 341-360%2C 370-392%2C 405-427 and 437-459;gbkey=misc_feature;gene=treB;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4116610	4116678	.	-	.	ID=id6556;Note=10 probable transmembrane helices predicted for YE3774 by TMHMM2.0 at aa 113-135%2C 155-177%2C 184-206%2C226-244%2C 256-278%2C 298-320%2C 341-360%2C 370-392%2C 405-427 and 437-459;gbkey=misc_feature;gene=treB;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4116523	4116591	.	-	.	ID=id6556;Note=10 probable transmembrane helices predicted for YE3774 by TMHMM2.0 at aa 113-135%2C 155-177%2C 184-206%2C226-244%2C 256-278%2C 298-320%2C 341-360%2C 370-392%2C 405-427 and 437-459;gbkey=misc_feature;gene=treB;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4116409	4116465	.	-	.	ID=id6556;Note=10 probable transmembrane helices predicted for YE3774 by TMHMM2.0 at aa 113-135%2C 155-177%2C 184-206%2C226-244%2C 256-278%2C 298-320%2C 341-360%2C 370-392%2C 405-427 and 437-459;gbkey=misc_feature;gene=treB;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4116307	4116375	.	-	.	ID=id6556;Note=10 probable transmembrane helices predicted for YE3774 by TMHMM2.0 at aa 113-135%2C 155-177%2C 184-206%2C226-244%2C 256-278%2C 298-320%2C 341-360%2C 370-392%2C 405-427 and 437-459;gbkey=misc_feature;gene=treB;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4116181	4116249	.	-	.	ID=id6556;Note=10 probable transmembrane helices predicted for YE3774 by TMHMM2.0 at aa 113-135%2C 155-177%2C 184-206%2C226-244%2C 256-278%2C 298-320%2C 341-360%2C 370-392%2C 405-427 and 437-459;gbkey=misc_feature;gene=treB;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4116061	4116120	.	-	.	ID=id6556;Note=10 probable transmembrane helices predicted for YE3774 by TMHMM2.0 at aa 113-135%2C 155-177%2C 184-206%2C226-244%2C 256-278%2C 298-320%2C 341-360%2C 370-392%2C 405-427 and 437-459;gbkey=misc_feature;gene=treB;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4115965	4116033	.	-	.	ID=id6556;Note=10 probable transmembrane helices predicted for YE3774 by TMHMM2.0 at aa 113-135%2C 155-177%2C 184-206%2C226-244%2C 256-278%2C 298-320%2C 341-360%2C 370-392%2C 405-427 and 437-459;gbkey=misc_feature;gene=treB;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4115860	4115928	.	-	.	ID=id6556;Note=10 probable transmembrane helices predicted for YE3774 by TMHMM2.0 at aa 113-135%2C 155-177%2C 184-206%2C226-244%2C 256-278%2C 298-320%2C 341-360%2C 370-392%2C 405-427 and 437-459;gbkey=misc_feature;gene=treB;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4115764	4115832	.	-	.	ID=id6556;Note=10 probable transmembrane helices predicted for YE3774 by TMHMM2.0 at aa 113-135%2C 155-177%2C 184-206%2C226-244%2C 256-278%2C 298-320%2C 341-360%2C 370-392%2C 405-427 and 437-459;gbkey=misc_feature;gene=treB;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	4115923	4116813	.	-	.	ID=id6557;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score 73.7%2C E-value 2.5e-19;gbkey=misc_feature;gene=treB;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	sequence_feature	4117012	4117113	.	-	.	ID=id6558;Note=Pfam match to entry PF00367 PTS_EIIB%2Cphosphotransferase system%2C EIIB%2C score 48.0%2C E-value 1.4e-11;gbkey=misc_feature;gene=treB;inference=protein motif:PFAM:PF00367
AM286415.1	EMBL	sequence_feature	4117027	4117080	.	-	.	ID=id6559;Note=PS01035 PTS EIIB domains cysteine phosphorylation site signature.;gbkey=misc_feature;gene=treB;inference=protein motif:Prosite:PS01035
AM286415.1	EMBL	gene	4117357	4118304	.	-	.	ID=gene3729;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=YE3775
AM286415.1	EMBL	CDS	4117357	4118304	.	-	0	ID=cds3629;Parent=gene3729;Dbxref=EnsemblGenomes-Gn:YE3775,EnsemblGenomes-Tr:CAL13799,GOA:A1JRE7,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR012771,InterPro:IPR028082,UniProtKB/TrEMBL:A1JRE7,NCBI_GP:CAL13799.1;Name=CAL13799.1;gbkey=CDS;gene=treR;product=trehalose operon repressor;protein_id=CAL13799.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4117360	4118121	.	-	.	ID=id6560;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 16.4%2C E-value 1.4e-06;gbkey=misc_feature;gene=treR;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	sequence_feature	4118215	4118298	.	-	.	ID=id6561;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 48.4%2C E-value 1e-11;gbkey=misc_feature;gene=treR;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	4118230	4118286	.	-	.	ID=id6562;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=treR;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	gene	4118811	4121531	.	+	.	ID=gene3730;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=YE3776
AM286415.1	EMBL	CDS	4118811	4121531	.	+	0	ID=cds3630;Parent=gene3730;Dbxref=EnsemblGenomes-Gn:YE3776,EnsemblGenomes-Tr:CAL13800,GOA:A1JRE9,InterPro:IPR001757,InterPro:IPR004014,InterPro:IPR006415,InterPro:IPR008250,InterPro:IPR018303,InterPro:IPR023214,InterPro:IPR023298,InterPro:IPR023299,UniProtKB/TrEMBL:A1JRE9,NCBI_GP:CAL13800.1;Name=CAL13800.1;Note=Similar to Salmonella typhimurium Mg2+ transport ATPase MgtA or stm4456 SWALL:ATMA_SALTY (SWALL:P36640) (902 aa) fasta scores: E(): 0%2C 71.38 38d in 905 aa%2C and to Salmonella typhi Mg2+ transport ATPase MgtA or sty4796 SWALL:Q8Z132 (EMBL:AL627283) (902 aa) fasta scores: E(): 0%2C 71.38 38d in 905 aa;gbkey=CDS;gene=mgtA;inference=similar to sequence:UniProtKB:P36640;product=Mg2+ transporter ATPase;protein_id=CAL13800.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4118934	4118963	.	+	.	ID=id6563;Note=PS00215 Mitochondrial energy transfer proteins signature.;gbkey=misc_feature;gene=mgtA;inference=protein motif:Prosite:PS00215
AM286415.1	EMBL	sequence_feature	4118970	4119182	.	+	.	ID=id6564;Note=Pfam match to entry PF00690 Cation_ATPase_N%2C Cation transporter/ATPase%2C N-terminus%2C score 44.0%2C E-value 2.2e-10;gbkey=misc_feature;gene=mgtA;inference=protein motif:PFAM:PF00690
AM286415.1	EMBL	sequence_feature	4119183	4119242	.	+	.	ID=id6565;Note=9 probable transmembrane helices predicted for YE3776 by TMHMM2.0 at aa 125-144%2C 253-275%2C 295-317%2C324-346%2C 718-740%2C 776-798%2C 808-830%2C 843-865 and 878-900;gbkey=misc_feature;gene=mgtA;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	4119567	4119635	.	+	.	ID=id6565;Note=9 probable transmembrane helices predicted for YE3776 by TMHMM2.0 at aa 125-144%2C 253-275%2C 295-317%2C324-346%2C 718-740%2C 776-798%2C 808-830%2C 843-865 and 878-900;gbkey=misc_feature;gene=mgtA;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	4119693	4119761	.	+	.	ID=id6565;Note=9 probable transmembrane helices predicted for YE3776 by TMHMM2.0 at aa 125-144%2C 253-275%2C 295-317%2C324-346%2C 718-740%2C 776-798%2C 808-830%2C 843-865 and 878-900;gbkey=misc_feature;gene=mgtA;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	4119780	4119848	.	+	.	ID=id6565;Note=9 probable transmembrane helices predicted for YE3776 by TMHMM2.0 at aa 125-144%2C 253-275%2C 295-317%2C324-346%2C 718-740%2C 776-798%2C 808-830%2C 843-865 and 878-900;gbkey=misc_feature;gene=mgtA;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	4120962	4121030	.	+	.	ID=id6565;Note=9 probable transmembrane helices predicted for YE3776 by TMHMM2.0 at aa 125-144%2C 253-275%2C 295-317%2C324-346%2C 718-740%2C 776-798%2C 808-830%2C 843-865 and 878-900;gbkey=misc_feature;gene=mgtA;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	4121136	4121204	.	+	.	ID=id6565;Note=9 probable transmembrane helices predicted for YE3776 by TMHMM2.0 at aa 125-144%2C 253-275%2C 295-317%2C324-346%2C 718-740%2C 776-798%2C 808-830%2C 843-865 and 878-900;gbkey=misc_feature;gene=mgtA;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	4121232	4121300	.	+	.	ID=id6565;Note=9 probable transmembrane helices predicted for YE3776 by TMHMM2.0 at aa 125-144%2C 253-275%2C 295-317%2C324-346%2C 718-740%2C 776-798%2C 808-830%2C 843-865 and 878-900;gbkey=misc_feature;gene=mgtA;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	4121337	4121405	.	+	.	ID=id6565;Note=9 probable transmembrane helices predicted for YE3776 by TMHMM2.0 at aa 125-144%2C 253-275%2C 295-317%2C324-346%2C 718-740%2C 776-798%2C 808-830%2C 843-865 and 878-900;gbkey=misc_feature;gene=mgtA;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	4121442	4121510	.	+	.	ID=id6565;Note=9 probable transmembrane helices predicted for YE3776 by TMHMM2.0 at aa 125-144%2C 253-275%2C 295-317%2C324-346%2C 718-740%2C 776-798%2C 808-830%2C 843-865 and 878-900;gbkey=misc_feature;gene=mgtA;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	4119198	4119920	.	+	.	ID=id6566;Note=Pfam match to entry PF00122 E1-E2_ATPase%2C E1-E2 ATPase%2C score 278.5%2C E-value 5.4e-81;gbkey=misc_feature;gene=mgtA;inference=protein motif:PFAM:PF00122
AM286415.1	EMBL	sequence_feature	4119930	4120820	.	+	.	ID=id6567;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 71.2%2C E-value 1.4e-18;gbkey=misc_feature;gene=mgtA;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	4119948	4119968	.	+	.	ID=id6568;Note=PS00154 E1-E2 ATPases phosphorylation site.;gbkey=misc_feature;gene=mgtA;inference=protein motif:Prosite:PS00154
AM286415.1	EMBL	gene	4121653	4123581	.	-	.	ID=gene3731;Name=YE3777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3777
AM286415.1	EMBL	CDS	4121653	4123581	.	-	0	ID=cds3631;Parent=gene3731;Dbxref=EnsemblGenomes-Gn:YE3777,EnsemblGenomes-Tr:CAL13801,GOA:A1JRF0,InterPro:IPR002178,InterPro:IPR003501,InterPro:IPR007737,InterPro:IPR011608,InterPro:IPR011991,InterPro:IPR013011,InterPro:IPR013196,InterPro:IPR016152,InterPro:IPR018356,UniProtKB/TrEMBL:A1JRF0,NCBI_GP:CAL13801.1;Name=CAL13801.1;Note=Similar to Salmonella typhimurium putative phosphotransferase system mannitol/fructose-specific IIa domain stm4448 SWALL:Q8ZK41 (EMBL:AE008908) (637 aa) fasta scores: E(): 9.2e-164%2C 64.95 38d in 642 aa%2C and to Salmonella typhi putative BglB-family transcriptional antiterminator sty4787 SWALL:Q8Z139 (EMBL:AL627283) (657 aa) fasta scores: E(): 2.6e-163%2C 64.64 38d in 642 aa%3B Phosphophorylatable regulatory domains found in the BglG family transcriptional antiterminator;gbkey=CDS;inference=similar to sequence:INSDC:AL627283;product=Putative transcriptional regulator;protein_id=CAL13801.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4121671	4122087	.	-	.	ID=id6569;Note=Pfam match to entry PF00359 PTS_EIIA_2%2CPhosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2%2C score -8.8%2C E-value 3.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00359
AM286415.1	EMBL	sequence_feature	4122403	4122690	.	-	.	ID=id6570;Note=Pfam match to entry PF00874 PRD%2C PRD domain%2C score 78.1%2C E-value 1.2e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF00874
AM286415.1	EMBL	sequence_feature	4123462	4123563	.	-	.	ID=id6571;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00894
AM286415.1	EMBL	gene	4123653	4124876	.	-	.	ID=gene3732;Name=YE3778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3778
AM286415.1	EMBL	CDS	4123653	4124876	.	-	0	ID=cds3632;Parent=gene3732;Dbxref=EnsemblGenomes-Gn:YE3778,EnsemblGenomes-Tr:CAL13802,InterPro:IPR011048,InterPro:IPR015943,InterPro:IPR019405,UniProtKB/TrEMBL:A1JRF2,NCBI_GP:CAL13802.1;Name=CAL13802.1;Note=Similar to Ralstonia solanacearum putative hemagglutinin-related protein rsp0183 or rs04695 SWALL:Q8XTD0 (EMBL:AL646077) (410 aa) fasta scores: E(): 1.4e-22%2C 35.96 38d in 406 aa%2C and to Bacillus subtilis hypothetical protein YkgB ykgB SWALL:YKGB_BACSU (SWALL:O34499) (349 aa) fasta scores: E(): 9.2e-21%2C 33.05 id in 363 aa%2C and to Listeria monocytogenes hypothetical protein Lmo0558 lmo0558 SWALL:Q8Y9H0 (EMBL:AL591975) (346 aa) fasta scores: E(): 2.6e-19%2C 31.6 38d in 367 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:O34499;product=putative exported protein;protein_id=CAL13802.1;transl_table=11
AM286415.1	EMBL	gene	4124986	4125726	.	-	.	ID=gene3733;Name=YE3779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3779
AM286415.1	EMBL	CDS	4124986	4125726	.	-	0	ID=cds3633;Parent=gene3733;Dbxref=EnsemblGenomes-Gn:YE3779,EnsemblGenomes-Tr:CAL13803,InterPro:IPR010763,PDB:3LM7,UniProtKB/TrEMBL:A1JRF3,NCBI_GP:CAL13803.1;Name=CAL13803.1;Note=Similar to Salmonella typhi hypothetical protein Sty4786 SWALL:Q8Z140 (EMBL:AL627283) (246 aa) fasta scores: E(): 3.3e-68%2C 78.77 38d in 245 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627283;product=conserved hypothetical protein;protein_id=CAL13803.1;transl_table=11
AM286415.1	EMBL	gene	4125730	4126842	.	-	.	ID=gene3734;Name=YE3780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3780
AM286415.1	EMBL	CDS	4125730	4126842	.	-	0	ID=cds3634;Parent=gene3734;Dbxref=EnsemblGenomes-Gn:YE3780,EnsemblGenomes-Tr:CAL13804,GOA:A1JRF4,InterPro:IPR006337,InterPro:IPR015421,InterPro:IPR015424,InterPro:IPR018319,UniProtKB/TrEMBL:A1JRF4,NCBI_GP:CAL13804.1;Name=CAL13804.1;Note=Similar to Salmonella typhi hypothetical protein Sty4785 SWALL:Q8Z141 (EMBL:AL627283) (372 aa) fasta scores: E(): 1.3e-95%2C 72.75 38d in 367 aa%2C and to Salmonella typhimurium putative selenocysteine synthase stm4446 SWALL:Q8ZK43 (EMBL:AE008908) (372 aa) fasta scores: E(): 1.5e-95%2C 72.75 38d in 367 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627283;product=possible L-seryl-tRNA selenocysteine synthase;protein_id=CAL13804.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4125787	4126806	.	-	.	ID=id6572;Note=Pfam match to entry PF03841 SelA%2C L-seryl-tRNA selenium transferase%2C score -92.3%2C E-value 1.6e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF03841
AM286415.1	EMBL	gene	4126826	4127995	.	-	.	ID=gene3735;Name=YE3781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3781
AM286415.1	EMBL	CDS	4126826	4127995	.	-	0	ID=cds3635;Parent=gene3735;Dbxref=EnsemblGenomes-Gn:YE3781,EnsemblGenomes-Tr:CAL13805,GOA:A1JRF6,InterPro:IPR011059,InterPro:IPR020043,UniProtKB/TrEMBL:A1JRF6,NCBI_GP:CAL13805.1;Name=CAL13805.1;Note=Similar to Salmonella typhi hypothetical protein Sty4784 SWALL:Q8Z142 (EMBL:AL627283) (377 aa) fasta scores: E(): 2.4e-86%2C 61.69 38d in 389 aa%2C and to Salmonella typhimurium putative dihydratase stm4445 SWALL:Q8ZK44 (EMBL:AE008908) (377 aa) fasta scores: E(): 4.3e-86%2C 61.44 38d in 389 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627283;product=conserved hypothetical protein;protein_id=CAL13805.1;transl_table=11
AM286415.1	EMBL	gene	4128190	4128843	.	-	.	ID=gene3736;Name=YE3782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3782
AM286415.1	EMBL	CDS	4128190	4128843	.	-	0	ID=cds3636;Parent=gene3736;Dbxref=EnsemblGenomes-Gn:YE3782,EnsemblGenomes-Tr:CAL13806,InterPro:IPR025456,UniProtKB/TrEMBL:A1JRF7,NCBI_GP:CAL13806.1;Name=CAL13806.1;Note=Similar to Salmonella typhimurium putative inner membrane protein stm4444 SWALL:Q8ZK45 (EMBL:AE008908) (214 aa) fasta scores: E(): 2.9e-66%2C 92.05 38d in 214 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008908;product=Putative inner membrane protein;protein_id=CAL13806.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4128733	4128801	.	-	.	ID=id6573;Note=6 probable transmembrane helices predicted for YE3782 by TMHMM2.0 at aa 15-37%2C 58-77%2C 87-109%2C 114-136%2C168-190 and 197-216;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4128613	4128672	.	-	.	ID=id6573;Note=6 probable transmembrane helices predicted for YE3782 by TMHMM2.0 at aa 15-37%2C 58-77%2C 87-109%2C 114-136%2C168-190 and 197-216;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4128517	4128585	.	-	.	ID=id6573;Note=6 probable transmembrane helices predicted for YE3782 by TMHMM2.0 at aa 15-37%2C 58-77%2C 87-109%2C 114-136%2C168-190 and 197-216;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4128436	4128504	.	-	.	ID=id6573;Note=6 probable transmembrane helices predicted for YE3782 by TMHMM2.0 at aa 15-37%2C 58-77%2C 87-109%2C 114-136%2C168-190 and 197-216;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4128274	4128342	.	-	.	ID=id6573;Note=6 probable transmembrane helices predicted for YE3782 by TMHMM2.0 at aa 15-37%2C 58-77%2C 87-109%2C 114-136%2C168-190 and 197-216;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4128196	4128255	.	-	.	ID=id6573;Note=6 probable transmembrane helices predicted for YE3782 by TMHMM2.0 at aa 15-37%2C 58-77%2C 87-109%2C 114-136%2C168-190 and 197-216;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	4128862	4129638	.	-	.	ID=gene3737;Name=YE3783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3783
AM286415.1	EMBL	CDS	4128862	4129638	.	-	0	ID=cds3637;Parent=gene3737;Dbxref=EnsemblGenomes-Gn:YE3783,EnsemblGenomes-Tr:CAL13807,InterPro:IPR020042,UniProtKB/TrEMBL:A1JRF8,NCBI_GP:CAL13807.1;Name=CAL13807.1;Note=Similar to Salmonella typhimurium%2C and Salmonella typhi putative inner membrane protein stm4443 or sty4782 SWALL:Q8XFG3 (EMBL:AE008908) (258 aa) fasta scores: E(): 1.5e-88%2C 85.27 38d in 258 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008908;product=putative exported protein;protein_id=CAL13807.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4129408	4129476	.	-	.	ID=id6574;Note=6 probable transmembrane helices predicted for YE3783 by TMHMM2.0 at aa 2-24%2C 55-77%2C 111-133%2C 143-165%2C177-199 and 214-232;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4129240	4129308	.	-	.	ID=id6574;Note=6 probable transmembrane helices predicted for YE3783 by TMHMM2.0 at aa 2-24%2C 55-77%2C 111-133%2C 143-165%2C177-199 and 214-232;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4129144	4129212	.	-	.	ID=id6574;Note=6 probable transmembrane helices predicted for YE3783 by TMHMM2.0 at aa 2-24%2C 55-77%2C 111-133%2C 143-165%2C177-199 and 214-232;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4129042	4129110	.	-	.	ID=id6574;Note=6 probable transmembrane helices predicted for YE3783 by TMHMM2.0 at aa 2-24%2C 55-77%2C 111-133%2C 143-165%2C177-199 and 214-232;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4128943	4128999	.	-	.	ID=id6574;Note=6 probable transmembrane helices predicted for YE3783 by TMHMM2.0 at aa 2-24%2C 55-77%2C 111-133%2C 143-165%2C177-199 and 214-232;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	4129652	4129948	.	-	.	ID=gene3738;Name=YE3784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3784
AM286415.1	EMBL	CDS	4129652	4129948	.	-	0	ID=cds3638;Parent=gene3738;Dbxref=EnsemblGenomes-Gn:YE3784,EnsemblGenomes-Tr:CAL13808,InterPro:IPR020037,UniProtKB/TrEMBL:A1JRG6,NCBI_GP:CAL13808.1;Name=CAL13808.1;Note=Similar to Salmonella typhimurium putative cytoplasmic protein stm4442 SWALL:Q8ZK46 (EMBL:AE008908) (100 aa) fasta scores: E(): 5.1e-22%2C 63.26 38d in 98 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008908;product=conserved hypothetical protein;protein_id=CAL13808.1;transl_table=11
AM286415.1	EMBL	gene	4129948	4130313	.	-	.	ID=gene3739;Name=YE3785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3785
AM286415.1	EMBL	CDS	4129948	4130313	.	-	0	ID=cds3639;Parent=gene3739;Dbxref=EnsemblGenomes-Gn:YE3785,EnsemblGenomes-Tr:CAL13809,InterPro:IPR020034,UniProtKB/TrEMBL:A1JRG7,NCBI_GP:CAL13809.1;Name=CAL13809.1;Note=Similar to Salmonella typhimurium%2C and Salmonella typhi putative cytoplasmic protein stm4441 or sty4780 SWALL:Q8XGX3 (EMBL:AE008908) (120 aa) fasta scores: E(): 6.2e-35%2C 84.03 38d in 119 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008908;product=conserved hypothetical protein;protein_id=CAL13809.1;transl_table=11
AM286415.1	EMBL	gene	4130337	4130681	.	-	.	ID=gene3740;Name=YE3786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3786
AM286415.1	EMBL	CDS	4130337	4130681	.	-	0	ID=cds3640;Parent=gene3740;Dbxref=EnsemblGenomes-Gn:YE3786,EnsemblGenomes-Tr:CAL13810,GOA:A1JRG8,InterPro:IPR011608,InterPro:IPR020044,UniProtKB/TrEMBL:A1JRG8,NCBI_GP:CAL13810.1;Name=CAL13810.1;Note=Similar to Salmonella typhimurium%2C and Salmonella typhi putative cytoplasmic protein stm4440 or sty4779 SWALL:Q8XGH7 (EMBL:AE008908) (112 aa) fasta scores: E(): 1.3e-18%2C 66.3 38d in 92 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008908;product=conserved hypothetical protein;protein_id=CAL13810.1;transl_table=11
AM286415.1	EMBL	gene	4131213	4131623	.	+	.	ID=gene3741;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=YE3787
AM286415.1	EMBL	CDS	4131213	4131623	.	+	0	ID=cds3641;Parent=gene3741;Dbxref=EnsemblGenomes-Gn:YE3787,EnsemblGenomes-Tr:CAL13811,GOA:A1JRG9,InterPro:IPR001437,InterPro:IPR023459,InterPro:IPR028625,InterPro:IPR029462,UniProtKB/TrEMBL:A1JRG9,NCBI_GP:CAL13811.1;Name=CAL13811.1;gbkey=CDS;gene=rnk;product=regulator of nucleoside diphosphate kinase;protein_id=CAL13811.1;transl_table=11
AM286415.1	EMBL	gene	4131672	4132058	.	-	.	ID=gene3742;Name=YE3788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3788
AM286415.1	EMBL	CDS	4131672	4132058	.	-	0	ID=cds3642;Parent=gene3742;Dbxref=EnsemblGenomes-Gn:YE3788,EnsemblGenomes-Tr:CAL13812,GOA:A1JRH0,InterPro:IPR009155,InterPro:IPR010980,UniProtKB/TrEMBL:A1JRH0,NCBI_GP:CAL13812.1;Name=CAL13812.1;gbkey=CDS;product=putative cytochrome;protein_id=CAL13812.1;transl_table=11
AM286415.1	EMBL	gene	4132248	4133588	.	-	.	ID=gene3743;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=YE3789
AM286415.1	EMBL	CDS	4132248	4133588	.	-	0	ID=cds3643;Parent=gene3743;Dbxref=EnsemblGenomes-Gn:YE3789,EnsemblGenomes-Tr:CAL13813,InterPro:IPR002510,UniProtKB/TrEMBL:A1JRH1,NCBI_GP:CAL13813.1;Name=CAL13813.1;gbkey=CDS;gene=pmbA;product=Putative modulator of DNA gyrase;protein_id=CAL13813.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4132620	4133501	.	-	.	ID=id6575;Note=Pfam match to entry PF01523 PmbA_TldD%2C Putative modulator of DNA gyrase%2C score 324.3%2C E-value 9.3e-95;gbkey=misc_feature;gene=pmbA;inference=protein motif:PFAM:PF01523
AM286415.1	EMBL	gene	4133757	4134302	.	+	.	ID=gene3744;Name=YE3790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3790
AM286415.1	EMBL	CDS	4133757	4134302	.	+	0	ID=cds3644;Parent=gene3744;Dbxref=EnsemblGenomes-Gn:YE3790,EnsemblGenomes-Tr:CAL13814,InterPro:IPR006839,InterPro:IPR023153,NCBI_GP:CAL13814.1;Name=CAL13814.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13814.1;transl_table=11
AM286415.1	EMBL	gene	4134454	4134720	.	-	.	ID=gene3745;Name=YE3791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3791
AM286415.1	EMBL	CDS	4134454	4134720	.	-	0	ID=cds3645;Parent=gene3745;Dbxref=EnsemblGenomes-Gn:YE3791,EnsemblGenomes-Tr:CAL13815,InterPro:IPR000468,UniProtKB/TrEMBL:A1JRH4,NCBI_GP:CAL13815.1;Name=CAL13815.1;gbkey=CDS;product=putative ribonuclease inhibitor;protein_id=CAL13815.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4134457	4134717	.	-	.	ID=id6576;Note=Pfam match to entry PF01337 Barstar%2C Barstar (barnase inhibitor)%2C score 9.7%2C E-value 0.00037;gbkey=misc_feature;inference=protein motif:PFAM:PF01337
AM286415.1	EMBL	gene	4134725	4135183	.	-	.	ID=gene3746;Name=YE3792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3792
AM286415.1	EMBL	CDS	4134725	4135183	.	-	0	ID=cds3646;Parent=gene3746;Dbxref=EnsemblGenomes-Gn:YE3792,EnsemblGenomes-Tr:CAL13816,GOA:A1JRH5,InterPro:IPR000026,InterPro:IPR001887,InterPro:IPR016191,UniProtKB/TrEMBL:A1JRH5,NCBI_GP:CAL13816.1;Name=CAL13816.1;gbkey=CDS;product=putative ribonuclease;protein_id=CAL13816.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4134728	4135027	.	-	.	ID=id6577;Note=Pfam match to entry PF00545 ribonuclease%2Cribonuclease%2C score 45.8%2C E-value 6.2e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00545
AM286415.1	EMBL	gene	4135296	4136789	.	-	.	ID=gene3747;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=YE3793
AM286415.1	EMBL	CDS	4135296	4136789	.	-	0	ID=cds3647;Parent=gene3747;Dbxref=EnsemblGenomes-Gn:YE3793,EnsemblGenomes-Tr:CAL13817,GOA:A1JRH6,InterPro:IPR010102,InterPro:IPR015590,InterPro:IPR016160,InterPro:IPR016161,InterPro:IPR016162,InterPro:IPR016163,InterPro:IPR029510,UniProtKB/TrEMBL:A1JRH6,NCBI_GP:CAL13817.1;Name=CAL13817.1;Note=Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 3.2e-105%2C56.19 38d in 468 aa%2C and to Salmonella typhimurium succinate-semialdehyde dehydrogenase i%2C NADP-dependent gabD or stm2791 SWALL:Q8ZMM2 (EMBL:AE008827) (482 aa) fasta scores: E(): 9.7e-107%2C 55.83 38d in 480 aa;gbkey=CDS;gene=gabD;inference=similar to sequence:UniProtKB:P25526;product=succinate-semialdehyde dehydrogenase [NADP+];protein_id=CAL13817.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4135302	4136690	.	-	.	ID=id6578;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 681.0%2C E-value 3.7e-202;gbkey=misc_feature;gene=gabD;inference=protein motif:PFAM:PF00171
AM286415.1	EMBL	sequence_feature	4135869	4135904	.	-	.	ID=id6579;Note=PS00070 Aldehyde dehydrogenases cysteine active site.;gbkey=misc_feature;gene=gabD;inference=protein motif:Prosite:PS00070
AM286415.1	EMBL	sequence_feature	4135965	4135988	.	-	.	ID=id6580;Note=PS00687 Aldehyde dehydrogenases glutamic acid active site.;gbkey=misc_feature;gene=gabD;inference=protein motif:Prosite:PS00687
AM286415.1	EMBL	sequence_feature	4136028	4136051	.	-	.	ID=id6581;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=gabD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4136911	4138866	.	-	.	ID=gene3748;Name=yhcP;gbkey=Gene;gene=yhcP;gene_biotype=protein_coding;locus_tag=YE3794
AM286415.1	EMBL	CDS	4136911	4138866	.	-	0	ID=cds3648;Parent=gene3748;Dbxref=EnsemblGenomes-Gn:YE3794,EnsemblGenomes-Tr:CAL13818,GOA:A1JRH8,InterPro:IPR006726,InterPro:IPR023706,NCBI_GP:CAL13818.1;Name=CAL13818.1;gbkey=CDS;gene=yhcP;product=putative membrane protein;protein_id=CAL13818.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4138774	4138833	.	-	.	ID=id6582;Note=10 probable transmembrane helices predicted for YE3794 by TMHMM2.0 at aa 12-31%2C 36-58%2C 65-87%2C 91-110%2C117-139%2C 149-166%2C 364-386%2C 401-423%2C 430-447 and 479-501;gbkey=misc_feature;gene=yhcP;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4138693	4138761	.	-	.	ID=id6582;Note=10 probable transmembrane helices predicted for YE3794 by TMHMM2.0 at aa 12-31%2C 36-58%2C 65-87%2C 91-110%2C117-139%2C 149-166%2C 364-386%2C 401-423%2C 430-447 and 479-501;gbkey=misc_feature;gene=yhcP;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4138606	4138674	.	-	.	ID=id6582;Note=10 probable transmembrane helices predicted for YE3794 by TMHMM2.0 at aa 12-31%2C 36-58%2C 65-87%2C 91-110%2C117-139%2C 149-166%2C 364-386%2C 401-423%2C 430-447 and 479-501;gbkey=misc_feature;gene=yhcP;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4138537	4138596	.	-	.	ID=id6582;Note=10 probable transmembrane helices predicted for YE3794 by TMHMM2.0 at aa 12-31%2C 36-58%2C 65-87%2C 91-110%2C117-139%2C 149-166%2C 364-386%2C 401-423%2C 430-447 and 479-501;gbkey=misc_feature;gene=yhcP;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4138450	4138518	.	-	.	ID=id6582;Note=10 probable transmembrane helices predicted for YE3794 by TMHMM2.0 at aa 12-31%2C 36-58%2C 65-87%2C 91-110%2C117-139%2C 149-166%2C 364-386%2C 401-423%2C 430-447 and 479-501;gbkey=misc_feature;gene=yhcP;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4138369	4138422	.	-	.	ID=id6582;Note=10 probable transmembrane helices predicted for YE3794 by TMHMM2.0 at aa 12-31%2C 36-58%2C 65-87%2C 91-110%2C117-139%2C 149-166%2C 364-386%2C 401-423%2C 430-447 and 479-501;gbkey=misc_feature;gene=yhcP;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4137709	4137777	.	-	.	ID=id6582;Note=10 probable transmembrane helices predicted for YE3794 by TMHMM2.0 at aa 12-31%2C 36-58%2C 65-87%2C 91-110%2C117-139%2C 149-166%2C 364-386%2C 401-423%2C 430-447 and 479-501;gbkey=misc_feature;gene=yhcP;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4137598	4137666	.	-	.	ID=id6582;Note=10 probable transmembrane helices predicted for YE3794 by TMHMM2.0 at aa 12-31%2C 36-58%2C 65-87%2C 91-110%2C117-139%2C 149-166%2C 364-386%2C 401-423%2C 430-447 and 479-501;gbkey=misc_feature;gene=yhcP;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4137526	4137579	.	-	.	ID=id6582;Note=10 probable transmembrane helices predicted for YE3794 by TMHMM2.0 at aa 12-31%2C 36-58%2C 65-87%2C 91-110%2C117-139%2C 149-166%2C 364-386%2C 401-423%2C 430-447 and 479-501;gbkey=misc_feature;gene=yhcP;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4137364	4137432	.	-	.	ID=id6582;Note=10 probable transmembrane helices predicted for YE3794 by TMHMM2.0 at aa 12-31%2C 36-58%2C 65-87%2C 91-110%2C117-139%2C 149-166%2C 364-386%2C 401-423%2C 430-447 and 479-501;gbkey=misc_feature;gene=yhcP;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	4137724	4137756	.	-	.	ID=id6583;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yhcP;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4138868	4139803	.	-	.	ID=gene3749;Name=yhcQ;gbkey=Gene;gene=yhcQ;gene_biotype=protein_coding;locus_tag=YE3795
AM286415.1	EMBL	CDS	4138868	4139803	.	-	0	ID=cds3649;Parent=gene3749;Dbxref=EnsemblGenomes-Gn:YE3795,EnsemblGenomes-Tr:CAL13819,GOA:A1JRH9,InterPro:IPR006143,InterPro:IPR022871,NCBI_GP:CAL13819.1;Name=CAL13819.1;gbkey=CDS;gene=yhcQ;product=putative HlyD family secretion protein;protein_id=CAL13819.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4138946	4139668	.	-	.	ID=id6584;Note=Pfam match to entry PF00529 HlyD%2C HlyD family secretion protein%2C score 113.2%2C E-value 3.2e-31;gbkey=misc_feature;gene=yhcQ;inference=protein motif:PFAM:PF00529
AM286415.1	EMBL	sequence_feature	4139705	4139773	.	-	.	ID=id6585;Note=1 probable transmembrane helix predicted for YE3795 by TMHMM2.0 at aa 11-33;gbkey=misc_feature;gene=yhcQ;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4139811	4140014	.	-	.	ID=gene3750;Name=YE3796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3796
AM286415.1	EMBL	CDS	4139811	4140014	.	-	0	ID=cds3650;Parent=gene3750;Dbxref=EnsemblGenomes-Gn:YE3796,EnsemblGenomes-Tr:CAL13820,GOA:A1JRI1,InterPro:IPR012451,NCBI_GP:CAL13820.1;Name=CAL13820.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13820.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4139928	4139996	.	-	.	ID=id6586;Note=2 probable transmembrane helices predicted for YE3796 by TMHMM2.0 at aa 7-29 and 44-66;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4139817	4139885	.	-	.	ID=id6586;Note=2 probable transmembrane helices predicted for YE3796 by TMHMM2.0 at aa 7-29 and 44-66;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	4139844	4139876	.	-	.	ID=id6587;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4140327	4141238	.	+	.	ID=gene3751;Name=YE3797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3797
AM286415.1	EMBL	CDS	4140327	4141238	.	+	0	ID=cds3651;Parent=gene3751;Dbxref=EnsemblGenomes-Gn:YE3797,EnsemblGenomes-Tr:CAL13821,GOA:A1JRI3,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JRI3,NCBI_GP:CAL13821.1;Name=CAL13821.1;gbkey=CDS;product=probable lysR-family transcriptional regulatory protein;protein_id=CAL13821.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4140336	4140515	.	+	.	ID=id6588;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 90.1%2C E-value 2.9e-24;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	4140378	4140470	.	+	.	ID=id6589;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	4140585	4141205	.	+	.	ID=id6590;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 163.2%2C E-value 3e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	4141310	4142755	.	-	.	ID=gene3752;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=YE3798
AM286415.1	EMBL	CDS	4141310	4142755	.	-	0	ID=cds3652;Parent=gene3752;Dbxref=EnsemblGenomes-Gn:YE3798,EnsemblGenomes-Tr:CAL13822,InterPro:IPR002510,InterPro:IPR025502,UniProtKB/TrEMBL:A1JRI4,NCBI_GP:CAL13822.1;Name=CAL13822.1;gbkey=CDS;gene=tldD;product=putative modulator of DNA gyrase;protein_id=CAL13822.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4141760	4142656	.	-	.	ID=id6591;Note=Pfam match to entry PF01523 PmbA_TldD%2C Putative modulator of DNA gyrase%2C score 368.5%2C E-value 4.5e-108;gbkey=misc_feature;gene=tldD;inference=protein motif:PFAM:PF01523
AM286415.1	EMBL	gene	4142767	4143627	.	-	.	ID=gene3753;Name=YE3799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3799
AM286415.1	EMBL	CDS	4142767	4143627	.	-	0	ID=cds3653;Parent=gene3753;Dbxref=EnsemblGenomes-Gn:YE3799,EnsemblGenomes-Tr:CAL13823,GOA:A1JRI6,InterPro:IPR001110,InterPro:IPR003010,UniProtKB/TrEMBL:A1JRI6,NCBI_GP:CAL13823.1;Name=CAL13823.1;gbkey=CDS;product=putative carbon-nitrogen hydrolase;protein_id=CAL13823.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4142809	4143621	.	-	.	ID=id6592;Note=Pfam match to entry PF00795 CN_hydrolase%2CCarbon-nitrogen hydrolase%2C score 188.5%2C E-value 7.1e-54;gbkey=misc_feature;inference=protein motif:PFAM:PF00795
AM286415.1	EMBL	sequence_feature	4143109	4143171	.	-	.	ID=id6593;Note=PS01227 Uncharacterized protein family UPF0012 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01227
AM286415.1	EMBL	gene	4143624	4147499	.	-	.	ID=gene3754;Name=YE3800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3800
AM286415.1	EMBL	CDS	4143624	4147499	.	-	0	ID=cds3654;Parent=gene3754;Dbxref=EnsemblGenomes-Gn:YE3800,EnsemblGenomes-Tr:CAL13824,InterPro:IPR011836,InterPro:IPR025263,UniProtKB/TrEMBL:A1JRI7,NCBI_GP:CAL13824.1;Name=CAL13824.1;gbkey=CDS;product=putative exported protein;protein_id=CAL13824.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4147413	4147481	.	-	.	ID=id6594;Note=1 probable transmembrane helix predicted for YE3800 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4147546	4149015	.	-	.	ID=gene3755;Name=cafA;gbkey=Gene;gene=cafA;gene_biotype=protein_coding;gene_synonym=rng;locus_tag=YE3801
AM286415.1	EMBL	CDS	4147546	4149015	.	-	0	ID=cds3655;Parent=gene3755;Dbxref=EnsemblGenomes-Gn:YE3801,EnsemblGenomes-Tr:CAL13825,GOA:A1JRI9,InterPro:IPR003029,InterPro:IPR004659,InterPro:IPR012340,InterPro:IPR019307,InterPro:IPR022967,UniProtKB/TrEMBL:A1JRI9,NCBI_GP:CAL13825.1;Name=CAL13825.1;gbkey=CDS;gene=cafA;product=ribonuclease G;protein_id=CAL13825.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4148650	4148913	.	-	.	ID=id6595;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 72.1%2C E-value 7.8e-19;gbkey=misc_feature;gene=cafA;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	gene	4149005	4149598	.	-	.	ID=gene3756;Name=yhdE;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=YE3802
AM286415.1	EMBL	CDS	4149005	4149598	.	-	0	ID=cds3656;Parent=gene3756;Dbxref=EnsemblGenomes-Gn:YE3802,EnsemblGenomes-Tr:CAL13826,GOA:A1JRJ0,InterPro:IPR003697,InterPro:IPR029001,UniProtKB/TrEMBL:A1JRJ0,NCBI_GP:CAL13826.1;Name=CAL13826.1;gbkey=CDS;gene=yhdE;product=putative inhibitor of septum formation;protein_id=CAL13826.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4149023	4149592	.	-	.	ID=id6596;Note=Pfam match to entry PF02545 Maf%2C Maf-like protein %2Cscore 281.3%2C E-value 7.8e-82;gbkey=misc_feature;gene=yhdE;inference=protein motif:PFAM:PF02545
AM286415.1	EMBL	gene	4149612	4150100	.	-	.	ID=gene3757;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=YE3803
AM286415.1	EMBL	CDS	4149612	4150100	.	-	0	ID=cds3657;Parent=gene3757;Dbxref=EnsemblGenomes-Gn:YE3803,EnsemblGenomes-Tr:CAL13827,GOA:A1JRJ1,InterPro:IPR007227,InterPro:IPR026034,UniProtKB/TrEMBL:A1JRJ1,NCBI_GP:CAL13827.1;Name=CAL13827.1;gbkey=CDS;gene=mreD;product=rod shape-determining protein MreD;protein_id=CAL13827.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4150020	4150073	.	-	.	ID=id6597;Note=5 probable transmembrane helices predicted for YE3803 by TMHMM2.0 at aa 10-27%2C 34-53%2C 68-90%2C 97-119 and 134-151;gbkey=misc_feature;gene=mreD;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4149942	4150001	.	-	.	ID=id6597;Note=5 probable transmembrane helices predicted for YE3803 by TMHMM2.0 at aa 10-27%2C 34-53%2C 68-90%2C 97-119 and 134-151;gbkey=misc_feature;gene=mreD;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4149831	4149899	.	-	.	ID=id6597;Note=5 probable transmembrane helices predicted for YE3803 by TMHMM2.0 at aa 10-27%2C 34-53%2C 68-90%2C 97-119 and 134-151;gbkey=misc_feature;gene=mreD;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4149744	4149812	.	-	.	ID=id6597;Note=5 probable transmembrane helices predicted for YE3803 by TMHMM2.0 at aa 10-27%2C 34-53%2C 68-90%2C 97-119 and 134-151;gbkey=misc_feature;gene=mreD;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4149648	4149701	.	-	.	ID=id6597;Note=5 probable transmembrane helices predicted for YE3803 by TMHMM2.0 at aa 10-27%2C 34-53%2C 68-90%2C 97-119 and 134-151;gbkey=misc_feature;gene=mreD;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	4150097	4151083	.	-	.	ID=gene3758;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=YE3804
AM286415.1	EMBL	CDS	4150097	4151083	.	-	0	ID=cds3658;Parent=gene3758;Dbxref=EnsemblGenomes-Gn:YE3804,EnsemblGenomes-Tr:CAL13828,GOA:A1JRJ2,InterPro:IPR007221,UniProtKB/TrEMBL:A1JRJ2,NCBI_GP:CAL13828.1;Name=CAL13828.1;gbkey=CDS;gene=mreC;product=rod shape-determining protein MreC;protein_id=CAL13828.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4150979	4151047	.	-	.	ID=id6598;Note=1 probable transmembrane helix predicted for YE3804 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;gene=mreC;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4151183	4152226	.	-	.	ID=gene3759;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;gene_synonym=envB,rodY;locus_tag=YE3805
AM286415.1	EMBL	CDS	4151183	4152226	.	-	0	ID=cds3659;Parent=gene3759;Dbxref=EnsemblGenomes-Gn:YE3805,EnsemblGenomes-Tr:CAL13829,GOA:A1JRJ3,InterPro:IPR004753,UniProtKB/TrEMBL:A1JRJ3,NCBI_GP:CAL13829.1;Name=CAL13829.1;gbkey=CDS;gene=mreB;product=rod shape-determining protein MreB;protein_id=CAL13829.1;transl_table=11
AM286415.1	EMBL	gene	4152561	4154480	.	-	.	ID=gene3760;Name=yhdA;gbkey=Gene;gene=yhdA;gene_biotype=protein_coding;locus_tag=YE3806
AM286415.1	EMBL	CDS	4152561	4154480	.	-	0	ID=cds3660;Parent=gene3760;Dbxref=EnsemblGenomes-Gn:YE3806,EnsemblGenomes-Tr:CAL13830,InterPro:IPR000160,InterPro:IPR001633,InterPro:IPR029787,UniProtKB/TrEMBL:A1JRJ4,NCBI_GP:CAL13830.1;Name=CAL13830.1;gbkey=CDS;gene=yhdA;product=putative exported protein;protein_id=CAL13830.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4152579	4153307	.	-	.	ID=id6599;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score 130.1%2C E-value 2.5e-36;gbkey=misc_feature;gene=yhdA;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	sequence_feature	4153347	4153823	.	-	.	ID=id6600;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 53.2%2C E-value 3.6e-13;gbkey=misc_feature;gene=yhdA;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	4154385	4154453	.	-	.	ID=id6601;Note=2 probable transmembrane helices predicted for YE3806 by TMHMM2.0 at aa 10-32 and 133-155;gbkey=misc_feature;gene=yhdA;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4154016	4154084	.	-	.	ID=id6601;Note=2 probable transmembrane helices predicted for YE3806 by TMHMM2.0 at aa 10-32 and 133-155;gbkey=misc_feature;gene=yhdA;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	4154765	4155742	.	+	.	ID=gene3761;Name=yhdH;gbkey=Gene;gene=yhdH;gene_biotype=protein_coding;locus_tag=YE3807
AM286415.1	EMBL	CDS	4154765	4155742	.	+	0	ID=cds3661;Parent=gene3761;Dbxref=EnsemblGenomes-Gn:YE3807,EnsemblGenomes-Tr:CAL13831,GOA:A1JRJ6,InterPro:IPR002085,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR014188,InterPro:IPR016040,UniProtKB/TrEMBL:A1JRJ6,NCBI_GP:CAL13831.1;Name=CAL13831.1;gbkey=CDS;gene=yhdH;product=probable zinc-binding dehydrogenase;protein_id=CAL13831.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4154789	4155736	.	+	.	ID=id6602;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenase%2C score 123.1%2C E-value 3.3e-34;gbkey=misc_feature;gene=yhdH;inference=protein motif:PFAM:PF00107
AM286415.1	EMBL	sequence_feature	4155455	4155487	.	+	.	ID=id6603;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yhdH;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4156006	4156935	.	+	.	ID=gene3762;Name=YE3808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3808
AM286415.1	EMBL	CDS	4156006	4156935	.	+	0	ID=cds3662;Parent=gene3762;Dbxref=EnsemblGenomes-Gn:YE3808,EnsemblGenomes-Tr:CAL13832,GOA:A1JRJ7,InterPro:IPR000572,InterPro:IPR022867,UniProtKB/TrEMBL:A1JRJ7,NCBI_GP:CAL13832.1;Name=CAL13832.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13832.1;transl_table=11
AM286415.1	EMBL	gene	4156935	4157534	.	+	.	ID=gene3763;Name=YE3809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3809
AM286415.1	EMBL	CDS	4156935	4157534	.	+	0	ID=cds3663;Parent=gene3763;Dbxref=EnsemblGenomes-Gn:YE3809,EnsemblGenomes-Tr:CAL13833,GOA:A1JRJ8,InterPro:IPR013130,InterPro:IPR022837,NCBI_GP:CAL13833.1;Name=CAL13833.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13833.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4156971	4157039	.	+	.	ID=id6604;Note=6 probable transmembrane helices predicted for YE3809 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-101%2C 116-138%2C150-167 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4157067	4157135	.	+	.	ID=id6604;Note=6 probable transmembrane helices predicted for YE3809 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-101%2C 116-138%2C150-167 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4157169	4157237	.	+	.	ID=id6604;Note=6 probable transmembrane helices predicted for YE3809 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-101%2C 116-138%2C150-167 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4157280	4157348	.	+	.	ID=id6604;Note=6 probable transmembrane helices predicted for YE3809 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-101%2C 116-138%2C150-167 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4157382	4157435	.	+	.	ID=id6604;Note=6 probable transmembrane helices predicted for YE3809 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-101%2C 116-138%2C150-167 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4157448	4157501	.	+	.	ID=id6604;Note=6 probable transmembrane helices predicted for YE3809 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-101%2C 116-138%2C150-167 and 172-189;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	4157743	4158195	.	+	.	ID=gene3764;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=YE3810
AM286415.1	EMBL	CDS	4157743	4158195	.	+	0	ID=cds3664;Parent=gene3764;Dbxref=EnsemblGenomes-Gn:YE3810,EnsemblGenomes-Tr:CAL13834,GOA:A1JRK0,InterPro:IPR001874,InterPro:IPR018509,NCBI_GP:CAL13834.1;Name=CAL13834.1;gbkey=CDS;gene=aroQ;product=putative class II dehydroquinase;protein_id=CAL13834.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4157755	4158186	.	+	.	ID=id6605;Note=Pfam match to entry PF01220 DHquinase_II%2CDehydroquinase class II%2C score 308.4%2C E-value 5.8e-90;gbkey=misc_feature;gene=aroQ;inference=protein motif:PFAM:PF01220
AM286415.1	EMBL	sequence_feature	4157770	4157823	.	+	.	ID=id6606;Note=PS01029 Dehydroquinase class II signature.;gbkey=misc_feature;gene=aroQ;inference=protein motif:Prosite:PS01029
AM286415.1	EMBL	gene	4158353	4158817	.	+	.	ID=gene3765;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;gene_synonym=fabE;locus_tag=YE3811
AM286415.1	EMBL	CDS	4158353	4158817	.	+	0	ID=cds3665;Parent=gene3765;Dbxref=EnsemblGenomes-Gn:YE3811,EnsemblGenomes-Tr:CAL13835,GOA:A1JRK1,InterPro:IPR000089,InterPro:IPR001249,InterPro:IPR001882,InterPro:IPR011053,UniProtKB/TrEMBL:A1JRK1,NCBI_GP:CAL13835.1;Name=CAL13835.1;gbkey=CDS;gene=accB;product=biotin carboxyl carrier protein of acetyl-CoA carboxylase;protein_id=CAL13835.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4158587	4158811	.	+	.	ID=id6607;Note=Pfam match to entry PF00364 biotin_lipoyl%2CBiotin-requiring enzyme%2C score 132.2%2C E-value 6.1e-37;gbkey=misc_feature;gene=accB;inference=protein motif:PFAM:PF00364
AM286415.1	EMBL	sequence_feature	4158680	4158733	.	+	.	ID=id6608;Note=PS00188 Biotin-requiring enzymes attachment site.;gbkey=misc_feature;gene=accB;inference=protein motif:Prosite:PS00188
AM286415.1	EMBL	gene	4158829	4160178	.	+	.	ID=gene3766;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;gene_synonym=fabG;locus_tag=YE3812
AM286415.1	EMBL	CDS	4158829	4160178	.	+	0	ID=cds3666;Parent=gene3766;Dbxref=EnsemblGenomes-Gn:YE3812,EnsemblGenomes-Tr:CAL13836,GOA:A1JRK3,InterPro:IPR004549,InterPro:IPR005479,InterPro:IPR005481,InterPro:IPR005482,InterPro:IPR011054,InterPro:IPR011761,InterPro:IPR011764,InterPro:IPR013815,InterPro:IPR013816,InterPro:IPR016185,UniProtKB/TrEMBL:A1JRK3,NCBI_GP:CAL13836.1;Name=CAL13836.1;gbkey=CDS;gene=accC;product=biotin carboxylase;protein_id=CAL13836.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4158829	4159167	.	+	.	ID=id6609;Note=Pfam match to entry PF00289 CPSase_L_chain%2CCarbamoyl-phosphate synthase L chain%2C N-terminal domain %2Cscore 199.4%2C E-value 3.5e-57;gbkey=misc_feature;gene=accC;inference=protein motif:PFAM:PF00289
AM286415.1	EMBL	sequence_feature	4159171	4159815	.	+	.	ID=id6610;Note=Pfam match to entry PF02786 CPSase_L_D2%2CCarbamoyl-phosphate synthase L chain%2C ATP binding domain %2Cscore 411.0%2C E-value 7.4e-121;gbkey=misc_feature;gene=accC;inference=protein motif:PFAM:PF02786
AM286415.1	EMBL	sequence_feature	4159288	4159332	.	+	.	ID=id6611;Note=PS00866 Carbamoyl-phosphate synthase subdomain signature 1.;gbkey=misc_feature;gene=accC;inference=protein motif:Prosite:PS00866
AM286415.1	EMBL	sequence_feature	4159684	4159707	.	+	.	ID=id6612;Note=PS00867 Carbamoyl-phosphate synthase subdomain signature 2.;gbkey=misc_feature;gene=accC;inference=protein motif:Prosite:PS00867
AM286415.1	EMBL	sequence_feature	4159834	4160151	.	+	.	ID=id6613;Note=Pfam match to entry PF02785 Biotin_carb_C%2C Biotin carboxylase C-terminal domain%2C score 232.8%2C E-value 3.2e-67;gbkey=misc_feature;gene=accC;inference=protein motif:PFAM:PF02785
AM286415.1	EMBL	gene	4160453	4160695	.	+	.	ID=gene3767;Name=yhdT;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;locus_tag=YE3813
AM286415.1	EMBL	CDS	4160453	4160695	.	+	0	ID=cds3667;Parent=gene3767;Dbxref=EnsemblGenomes-Gn:YE3813,EnsemblGenomes-Tr:CAL13837,InterPro:IPR010398,UniProtKB/TrEMBL:A1JRK4,NCBI_GP:CAL13837.1;Name=CAL13837.1;gbkey=CDS;gene=yhdT;product=putative membrane protein;protein_id=CAL13837.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4160486	4160554	.	+	.	ID=id6614;Note=2 probable transmembrane helices predicted for YE3813 by TMHMM2.0 at aa 12-34 and 44-63;gbkey=misc_feature;gene=yhdT;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4160582	4160641	.	+	.	ID=id6614;Note=2 probable transmembrane helices predicted for YE3813 by TMHMM2.0 at aa 12-34 and 44-63;gbkey=misc_feature;gene=yhdT;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	4160685	4162139	.	+	.	ID=gene3768;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=YE3814
AM286415.1	EMBL	CDS	4160685	4162139	.	+	0	ID=cds3668;Parent=gene3768;Dbxref=EnsemblGenomes-Gn:YE3814,EnsemblGenomes-Tr:CAL13838,GOA:A1JRL3,InterPro:IPR001734,InterPro:IPR011849,InterPro:IPR018212,InterPro:IPR019900,UniProtKB/TrEMBL:A1JRL3,NCBI_GP:CAL13838.1;Name=CAL13838.1;gbkey=CDS;gene=panF;product=sodium/pantothenate symporter;protein_id=CAL13838.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4160697	4160756	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	4160814	4160873	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	4160901	4160969	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	4161051	4161119	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	4161162	4161230	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	4161249	4161317	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	4161399	4161467	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	4161486	4161554	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	4161612	4161680	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	4161789	4161842	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	4161855	4161923	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	4161942	4162010	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	4162023	4162082	.	+	.	ID=id6615;Note=13 probable transmembrane helices predicted for YE3814 by TMHMM2.0 at aa 5-24%2C 44-63%2C 73-95%2C 123-145%2C160-182%2C 189-211%2C 239-261%2C 268-290%2C 310-332%2C 369-386%2C391-413%2C 420-442 and 447-466;gbkey=misc_feature;gene=panF;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	sequence_feature	4160790	4161980	.	+	.	ID=id6616;Note=Pfam match to entry PF00474 SSF%2C Sodium:solute symporter family%2C score 619.3%2C E-value 1.4e-183;gbkey=misc_feature;gene=panF;inference=protein motif:PFAM:PF00474
AM286415.1	EMBL	sequence_feature	4161147	4161224	.	+	.	ID=id6617;Note=PS00456 Sodium:solute symporter family signature 1.;gbkey=misc_feature;gene=panF;inference=protein motif:Prosite:PS00456
AM286415.1	EMBL	sequence_feature	4161924	4161986	.	+	.	ID=id6618;Note=PS00457 Sodium:solute symporter family signature 2.;gbkey=misc_feature;gene=panF;inference=protein motif:Prosite:PS00457
AM286415.1	EMBL	gene	4162315	4163196	.	+	.	ID=gene3769;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=YE3815
AM286415.1	EMBL	CDS	4162315	4163196	.	+	0	ID=cds3669;Parent=gene3769;Dbxref=EnsemblGenomes-Gn:YE3815,EnsemblGenomes-Tr:CAL13839,GOA:A1JRL5,InterPro:IPR004498,InterPro:IPR010456,InterPro:IPR029063,NCBI_GP:CAL13839.1;Name=CAL13839.1;gbkey=CDS;gene=prmA;product=ribosomal protein L11 methyltransferase;protein_id=CAL13839.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4162774	4162797	.	+	.	ID=id6619;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=prmA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4163625	4164590	.	+	.	ID=gene3770;Name=YE3816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3816
AM286415.1	EMBL	CDS	4163625	4164590	.	+	0	ID=cds3670;Parent=gene3770;Dbxref=EnsemblGenomes-Gn:YE3816,EnsemblGenomes-Tr:CAL13840,GOA:A1JRL6,InterPro:IPR001269,InterPro:IPR004652,InterPro:IPR013785,InterPro:IPR018517,InterPro:IPR024036,UniProtKB/TrEMBL:A1JRL6,NCBI_GP:CAL13840.1;Name=CAL13840.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13840.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4163658	4164587	.	+	.	ID=id6620;Note=Pfam match to entry PF01207 UPF0034%2C Dihydrouridine synthase (Dus)%2C score 509.5%2C E-value 1.6e-150;gbkey=misc_feature;inference=protein motif:PFAM:PF01207
AM286415.1	EMBL	sequence_feature	4163904	4163960	.	+	.	ID=id6621;Note=PS01136 Uncharacterized protein family UPF0034 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01136
AM286415.1	EMBL	gene	4164615	4164911	.	+	.	ID=gene3771;Name=fiS;gbkey=Gene;gene=fiS;gene_biotype=protein_coding;locus_tag=YE3817
AM286415.1	EMBL	CDS	4164615	4164911	.	+	0	ID=cds3671;Parent=gene3771;Dbxref=EnsemblGenomes-Gn:YE3817,EnsemblGenomes-Tr:CAL13841,GOA:A1JRL7,InterPro:IPR002197,InterPro:IPR005412,InterPro:IPR009057,NCBI_GP:CAL13841.1;Name=CAL13841.1;gbkey=CDS;gene=fiS;product=DNA-binding protein Fis;protein_id=CAL13841.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4164777	4164899	.	+	.	ID=id6622;Note=Pfam match to entry PF02954 HTH_8%2C Bacterial regulatory protein%2C Fis family%2C score 60.9%2C E-value 1.8e-15;gbkey=misc_feature;gene=fiS;inference=protein motif:PFAM:PF02954
AM286415.1	EMBL	gene	4164983	4166542	.	-	.	ID=gene3772;Name=YE3818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3818
AM286415.1	EMBL	CDS	4164983	4166542	.	-	0	ID=cds3672;Parent=gene3772;Dbxref=EnsemblGenomes-Gn:YE3818,EnsemblGenomes-Tr:CAL13842,InterPro:IPR000160,InterPro:IPR029151,InterPro:IPR029787,UniProtKB/TrEMBL:A1JRL9,NCBI_GP:CAL13842.1;Name=CAL13842.1;Note=Similar to Ralstonia solanacearum probable transmembrane protein rsc1893 or rs03455 SWALL:Q8XY70 (EMBL:AL646067) (533 aa) fasta scores: E(): 7.6e-80%2C 45.4 id in 511 aa%2C and to Agrobacterium tumefaciens two component response regulator pleD or atu1297 or agr_c_2387 SWALL:Q8UFV0 (EMBL:AE009091) (456 aa) fasta scores: E(): 3.6e-19%2C 29.24 38d in 465 aa%3B possible N-terminal membrane anchor;gbkey=CDS;inference=similar to sequence:INSDC:AL646067;product=Possible regulator involved in cell signalling;protein_id=CAL13842.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4164998	4165459	.	-	.	ID=id6623;Note=Pfam match to entry PF00990 GGDEF%2C GGDEF domain %2Cscore 205.9%2C E-value 4e-59;gbkey=misc_feature;inference=protein motif:PFAM:PF00990
AM286415.1	EMBL	sequence_feature	4165808	4165855	.	-	.	ID=id6624;Note=Pfam match to entry PF02743 Cache%2C Cache domain %2Cscore 3.1%2C E-value 1.3;gbkey=misc_feature;inference=protein motif:PFAM:PF02743
AM286415.1	EMBL	sequence_feature	4166030	4166107	.	-	.	ID=id6625;Note=Pfam match to entry PF02743 Cache%2C Cache domain %2Cscore 8.7%2C E-value 0.033;gbkey=misc_feature;inference=protein motif:PFAM:PF02743
AM286415.1	EMBL	sequence_feature	4166438	4166506	.	-	.	ID=id6626;Note=1 probable transmembrane helix predicted for YE3818 by TMHMM2.0 at aa 13-35;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4166784	4167254	.	+	.	ID=gene3773;Name=pcpY3;gbkey=Gene;gene=pcpY3;gene_biotype=protein_coding;locus_tag=YE3819
AM286415.1	EMBL	CDS	4166784	4167254	.	+	0	ID=cds3673;Parent=gene3773;Dbxref=EnsemblGenomes-Gn:YE3819,EnsemblGenomes-Tr:CAL13843,UniProtKB/TrEMBL:A1JRM1,NCBI_GP:CAL13843.1;Name=CAL13843.1;gbkey=CDS;gene=pcpY3;product=outer membrane lipoprotein;protein_id=CAL13843.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4166805	4166837	.	+	.	ID=id6627;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=pcpY3;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	repeat_region	4167475	4167520	.	+	.	ID=id6628;Note=ttatgmaagcagttttagtaaagcagtycycmgtwywagcgytatc;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	4167522	4167560	.	+	.	ID=id6629;Note=ayagataycycttctccgygarwytcctyctaagtgccc;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	4167629	4167866	.	+	.	ID=id6630;Note=repeat region;gbkey=repeat_region
AM286415.1	EMBL	gene	4167654	4167866	.	+	.	ID=gene3774;Name=cspA1;gbkey=Gene;gene=cspA1;gene_biotype=protein_coding;gene_synonym=cspI;locus_tag=YE3821
AM286415.1	EMBL	CDS	4167654	4167866	.	+	0	ID=cds3674;Parent=gene3774;Dbxref=EnsemblGenomes-Gn:YE3821,EnsemblGenomes-Tr:CAL13844,GOA:A1JRM3,InterPro:IPR002059,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,InterPro:IPR019844,UniProtKB/TrEMBL:A1JRM3,NCBI_GP:CAL13844.1;Name=CAL13844.1;Note=Similar to previously sequenced Yersinia enterocolitica major cold shock protein CspA1 cspA1 SWALL:Q9RIF2 (EMBL:U82821) (70 aa) fasta scores: E(): 3e-27%2C 98.57 38d in 70 aa%2C and to Yersinia pestis major cold shock protein CspA1 cspA1 or ypo3644 SWALL:Q8ZAY7 (EMBL:AJ414158) (70 aa) fasta scores: E(): 1e-26%2C 95.71 id in 70 aa%2C and to Escherichia coli cold shock-like protein CspI cspI or cspJ or b1552 SWALL:CSPI_ECOLI (SWALL:P77605) (70 aa) fasta scores: E(): 6.5e-22%2C 82.85 id in 70 aa;gbkey=CDS;gene=cspA1;inference=similar to sequence:UniProtKB:P77605;product=major cold shock protein CspA1;protein_id=CAL13844.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4167663	4167863	.	+	.	ID=id6631;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 154.8%2C E-value 9.6e-44;gbkey=misc_feature;gene=cspA1;inference=protein motif:PFAM:PF00313
AM286415.1	EMBL	sequence_feature	4167705	4167764	.	+	.	ID=id6632;Note=PS00352 'Cold-shock' DNA-binding domain signature.;gbkey=misc_feature;gene=cspA1;inference=protein motif:Prosite:PS00352
AM286415.1	EMBL	repeat_region	4167976	4168021	.	+	.	ID=id6633;Note=ttatgmaagcagttttagtaaagcagtycycmgtwywagcgytatc;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	4168024	4168062	.	+	.	ID=id6634;Note=ayagataycycttctccgygarwytcctyctaagtgccc;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	4168108	4168345	.	+	.	ID=id6635;Note=repeat region;gbkey=repeat_region
AM286415.1	EMBL	gene	4168133	4168345	.	+	.	ID=gene3775;Name=cspA3;gbkey=Gene;gene=cspA3;gene_biotype=protein_coding;gene_synonym=cspG;locus_tag=YE3822
AM286415.1	EMBL	CDS	4168133	4168345	.	+	0	ID=cds3675;Parent=gene3775;Dbxref=EnsemblGenomes-Gn:YE3822,EnsemblGenomes-Tr:CAL13845,GOA:A1JRM3,InterPro:IPR002059,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,InterPro:IPR019844,UniProtKB/TrEMBL:A1JRM3,NCBI_GP:CAL13845.1;Name=CAL13845.1;Note=Similar to previously sequenced Yersinia enterocolitica major cold shock protein CspaA cspA1 SWALL:Q9RIF2 (EMBL:U82821) (70 aa) fasta scores: E(): 3e-27%2C 98.57 38d in 70 aa%2C and to Yersinia pestis major cold shock protein CspA1 cspA1 or ypo3644 SWALL:Q8ZAY7 (EMBL:AJ414158) (70 aa) fasta scores: E(): 1e-26%2C 95.71 id in 70 aa%2C and to Escherichia coli%2C and Escherichia coli O157:H7 cold shock-like protein CspG cspG or cspI or b0990 or z1406 or ecs1145 SWALL:CSPG_ECOLI (SWALL:Q47130) (70 aa) fasta scores: E(): 6.5e-22%2C 80 38d in 70 aa%3B probable tandem gene duplication event;gbkey=CDS;gene=cspA3;inference=similar to sequence:UniProtKB:Q47130;product=major cold shock protein CspA1;protein_id=CAL13845.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4168142	4168342	.	+	.	ID=id6636;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 154.8%2C E-value 9.6e-44;gbkey=misc_feature;gene=cspA3;inference=protein motif:PFAM:PF00313
AM286415.1	EMBL	sequence_feature	4168184	4168243	.	+	.	ID=id6637;Note=PS00352 'Cold-shock' DNA-binding domain signature.;gbkey=misc_feature;gene=cspA3;inference=protein motif:Prosite:PS00352
AM286415.1	EMBL	repeat_region	4168457	4168502	.	+	.	ID=id6638;Note=ttatgmaagcagttttagtaaagcagtycycmgtwywagcgytatc;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	4168505	4168543	.	+	.	ID=id6639;Note=ayagataycycttctccgygarwytcctyctaagtgccc;gbkey=repeat_region
AM286415.1	EMBL	repeat_region	4168588	4168825	.	+	.	ID=id6640;Note=repeat region;gbkey=repeat_region
AM286415.1	EMBL	gene	4168613	4168825	.	+	.	ID=gene3776;Name=cspA2;gbkey=Gene;gene=cspA2;gene_biotype=protein_coding;gene_synonym=cspI;locus_tag=YE3823
AM286415.1	EMBL	CDS	4168613	4168825	.	+	0	ID=cds3676;Parent=gene3776;Dbxref=EnsemblGenomes-Gn:YE3823,EnsemblGenomes-Tr:CAL13846,GOA:A1JRM8,InterPro:IPR002059,InterPro:IPR011129,InterPro:IPR012156,InterPro:IPR012340,InterPro:IPR019844,UniProtKB/TrEMBL:A1JRM8,NCBI_GP:CAL13846.1;Name=CAL13846.1;Note=Similar to previously sequenced Yersinia enterocolitica major cold shock protein CspA2 cspA2 SWALL:Q9RIF1 (EMBL:U82821) (70 aa) fasta scores: E(): 7.8e-28%2C 100 38d in 70 aa%2C and to Escherichia coli cold shock-like protein CspI cspI or cspJ or b1552 SWALL:CSPI_ECOLI (SWALL:P77605) (70 aa) fasta scores: E(): 3.2e-23%2C 84.28 38d in 70 aa;gbkey=CDS;gene=cspA2;inference=similar to sequence:UniProtKB:P77605;product=major cold shock protein;protein_id=CAL13846.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4168622	4168822	.	+	.	ID=id6641;Note=Pfam match to entry PF00313 CSD%2C 'Cold-shock' DNA-binding domain%2C score 159.6%2C E-value 3.5e-45;gbkey=misc_feature;gene=cspA2;inference=protein motif:PFAM:PF00313
AM286415.1	EMBL	sequence_feature	4168664	4168723	.	+	.	ID=id6642;Note=PS00352 'Cold-shock' DNA-binding domain signature.;gbkey=misc_feature;gene=cspA2;inference=protein motif:Prosite:PS00352
AM286415.1	EMBL	repeat_region	4169010	4170271	.	+	.	ID=id6643;Note=IS1330;gbkey=repeat_region
AM286415.1	EMBL	gene	4169053	4170246	.	+	.	ID=gene3777;Name=tpn1330;gbkey=Gene;gene=tpn1330;gene_biotype=protein_coding;locus_tag=YE3824
AM286415.1	EMBL	CDS	4169053	4170246	.	+	0	ID=cds3677;Parent=gene3777;Dbxref=EnsemblGenomes-Gn:YE3824,EnsemblGenomes-Tr:CAL13847,GOA:A1JRN0,InterPro:IPR002559,InterPro:IPR012337,UniProtKB/TrEMBL:A1JRN0,NCBI_GP:CAL13847.1;Name=CAL13847.1;Note=Highly similar to Yersinia enterocolitica IS10-like transposase for IS1330 element SWALL:Q8RSF5 (EMBL:AJ344215) (397 aa) fasta scores: E(): 5.5e-131%2C78.33 38d in 397 aa. Also similar to Shigella flexneri%2Cand Shigella flexneri 2A IS10 orf S0034 or Cp0027 SWALL:Q9AFX7 (EMBL:AF348706) (407 aa) fasta scores: E(): 2.5e-119%2C 73.04 38d in 397 aa. Note this copy of IS1330 although highly similar to the others within this genome may represent a descrete IS element.;gbkey=CDS;gene=tpn1330;inference=similar to sequence:INSDC:AJ344215;product=transposase for IS1330;protein_id=CAL13847.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4169323	4170042	.	+	.	ID=id6644;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 58.0%2C E-value 1.3e-14;gbkey=misc_feature;gene=tpn1330;inference=protein motif:PFAM:PF01609
AM286415.1	EMBL	sequence_feature	4169989	4170057	.	+	.	ID=id6645;Note=1 probable transmembrane helix predicted for YE3824 by TMHMM2.0 at aa 323-345;gbkey=misc_feature;gene=tpn1330;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	repeat_region	4170286	4171633	.	+	.	ID=id6646;Note=insertion element IS1328;gbkey=repeat_region
AM286415.1	EMBL	INVERTED	4170286	4170305	.	+	.	ID=id6647;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	pseudogene	4170354	4170764	.	+	.	ID=gene3778;Name=YE3825;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3825;part=1/2;pseudo=true
AM286415.1	EMBL	pseudogene	4170769	4171356	.	+	.	ID=gene3778;Name=YE3825;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YE3825;part=2/2;pseudo=true
AM286415.1	EMBL	CDS	4170354	4170764	.	+	0	ID=cds3678;Parent=gene3778;Dbxref=PSEUDO:CAL13848.1;Note=Previously sequenced as Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 1e-129%2C 97.9 38d in 334 aa. Also similar to Shigella flexneri 2a IS1328 transposase SWALL:Q93EZ2 (EMBL:AF326777) (334 aa) fasta scores: E(): 1.4e-97%2C74.08 38d in 328 aa. Note this CDS carries a frame shift mutation following codon 137.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=transposase for insertion sequence element IS1328 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	4170769	4171356	.	+	0	ID=cds3678;Parent=gene3778;Dbxref=PSEUDO:CAL13848.1;Note=Previously sequenced as Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 1e-129%2C 97.9 38d in 334 aa. Also similar to Shigella flexneri 2a IS1328 transposase SWALL:Q93EZ2 (EMBL:AF326777) (334 aa) fasta scores: E(): 1.4e-97%2C74.08 38d in 328 aa. Note this CDS carries a frame shift mutation following codon 137.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=transposase for insertion sequence element IS1328 (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	sequence_feature	4170904	4171242	.	+	.	ID=id6648;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 169.7%2CE-value 3.2e-48;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286415.1	EMBL	INVERTED	4171614	4171633	.	+	.	ID=id6649;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286415.1	EMBL	gene	4172077	4173489	.	+	.	ID=gene3779;Name=YE3827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3827
AM286415.1	EMBL	CDS	4172077	4173489	.	+	0	ID=cds3679;Parent=gene3779;Dbxref=EnsemblGenomes-Gn:YE3827,EnsemblGenomes-Tr:CAL13849,GOA:A1JRN4,InterPro:IPR001898,UniProtKB/TrEMBL:A1JRN4,NCBI_GP:CAL13849.1;Name=CAL13849.1;gbkey=CDS;product=putative membrane transport protein;protein_id=CAL13849.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4172077	4172280	.	+	.	ID=id6650;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	sequence_feature	4172083	4173486	.	+	.	ID=id6651;Note=Pfam match to entry PF00939 Na_sulph_symp%2CSodium:sulfate symporter transmembrane region%2C score 615.7%2C E-value 1.8e-182;gbkey=misc_feature;inference=protein motif:PFAM:PF00939
AM286415.1	EMBL	sequence_feature	4172176	4172235	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	4172239	4172298	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	4172308	4172376	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	4172590	4172658	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	4172716	4172784	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	4172881	4172940	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	4172950	4173009	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	4173046	4173114	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	4173157	4173225	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	4173244	4173312	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	4173388	4173456	.	+	.	ID=id6652;Note=12 probable transmembrane helices predicted for YE3827 by TMHMM2.0 at aa 7-24%2C 34-53%2C 55-74%2C 78-100%2C172-194%2C 214-236%2C 269-288%2C 292-311%2C 324-346%2C 361-383%2C390-412 and 438-460;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	4173343	4173375	.	+	.	ID=id6653;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4173537	4173719	.	+	.	ID=gene3780;Name=YE3828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3828
AM286415.1	EMBL	CDS	4173537	4173719	.	+	0	ID=cds3680;Parent=gene3780;Dbxref=EnsemblGenomes-Gn:YE3828,EnsemblGenomes-Tr:CAL13850,UniProtKB/TrEMBL:A1JRN6,NCBI_GP:CAL13850.1;Name=CAL13850.1;Note=Doubtful CDS;gbkey=CDS;product=Hypothetical protein;protein_id=CAL13850.1;transl_table=11
AM286415.1	EMBL	gene	4173848	4174768	.	+	.	ID=gene3781;Name=ddg;gbkey=Gene;gene=ddg;gene_biotype=protein_coding;locus_tag=YE3829
AM286415.1	EMBL	CDS	4173848	4174768	.	+	0	ID=cds3681;Parent=gene3781;Dbxref=EnsemblGenomes-Gn:YE3829,EnsemblGenomes-Tr:CAL13851,GOA:A1JRN7,InterPro:IPR004960,InterPro:IPR011920,UniProtKB/TrEMBL:A1JRN7,NCBI_GP:CAL13851.1;Name=CAL13851.1;gbkey=CDS;gene=ddg;product=putative membrane protein;protein_id=CAL13851.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4173857	4174738	.	+	.	ID=id6654;Note=Pfam match to entry PF03279 Lip_A_acyltrans%2CBacterial lipid A biosynthesis acyltransferase%2C score 431.9%2C E-value 3.8e-127;gbkey=misc_feature;gene=ddg;inference=protein motif:PFAM:PF03279
AM286415.1	EMBL	sequence_feature	4173908	4173976	.	+	.	ID=id6655;Note=1 probable transmembrane helix predicted for YE3829 by TMHMM2.0 at aa 21-43;gbkey=misc_feature;gene=ddg;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	repeat_region	4174800	4176235	.	-	.	ID=id6656;Note=IS1664;gbkey=repeat_region
AM286415.1	EMBL	gene	4174815	4175633	.	-	.	ID=gene3782;Name=YE3830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3830
AM286415.1	EMBL	CDS	4174815	4175633	.	-	0	ID=cds3682;Parent=gene3782;Dbxref=EnsemblGenomes-Gn:YE3830,EnsemblGenomes-Tr:CAL13852,GOA:A1JP33,InterPro:IPR001584,InterPro:IPR012337,InterPro:IPR025948,UniProtKB/TrEMBL:A1JP33,NCBI_GP:CAL13852.1;Name=CAL13852.1;Note=Similar to Yersinia pestis transposase for insertion sequence IS1661 SWALL:Q8XF80 (EMBL:AJ414160) (261 aa) fasta scores: E(): 5.9e-46%2C 50.19 38d in 257 aa. Also similar to Ralstonia solanacearum ISrsoII-transposase OrfB protein SWALL:Q8XX51 (EMBL:AL646069) (269 aa) fasta scores: E(): 7e-61%2C 58.11 38d in 265 aa%2C and to Escherichia coli putative transposase InsK for insertion sequence element IS150 SWALL:INSK_ECOLI (SWALL:P19769) (283 aa) fasta scores: E(): 7.1e-58%2C 53.43 38d in 262 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P19769;product=putative transposase for IS1664 element;protein_id=CAL13852.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4174851	4175330	.	-	.	ID=id6657;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 139.2%2C E-value 4.8e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	4175669	4176193	.	-	.	ID=gene3783;Name=YE3831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3831
AM286415.1	EMBL	CDS	4175669	4176193	.	-	0	ID=cds3683;Parent=gene3783;Dbxref=EnsemblGenomes-Gn:YE3831,EnsemblGenomes-Tr:CAL13853,GOA:A1JRN9,InterPro:IPR009057,UniProtKB/TrEMBL:A1JRN9,NCBI_GP:CAL13853.1;Name=CAL13853.1;Note=Similar to Yersinia pestis insertion element IS1661 DNA-binding protein YPO0996 SWALL:Q8ZHA8 (EMBL:AJ414145)(178 aa) fasta scores: E(): 8.6e-14%2C 36.51 id in 178 aa%2C and to Klebsiella pneumoniae OrfA SWALL:Q9AG22 (EMBL:AF345899) (173 aa) fasta scores: E(): 1e-18%2C 40.22 38d in 174 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=insertion element IS1664 protein;protein_id=CAL13853.1;transl_table=11
AM286415.1	EMBL	gene	4176282	4177820	.	-	.	ID=gene3784;Name=YE3832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3832
AM286415.1	EMBL	CDS	4176282	4177820	.	-	0	ID=cds3684;Parent=gene3784;Dbxref=EnsemblGenomes-Gn:YE3832,EnsemblGenomes-Tr:CAL13854,InterPro:IPR009199,InterPro:IPR029058,UniProtKB/TrEMBL:A1JRP7,NCBI_GP:CAL13854.1;Name=CAL13854.1;Note=Similar to Salmonella typhi PqaA SWALL:Q9RN45 (EMBL:AF188291) (518 aa) fasta scores: E(): 1.3e-100%2C51.74 38d in 487 aa%3B highly similar to Salmonella PhoP/Q regulated gene;gbkey=CDS;inference=similar to sequence:INSDC:AF188291;product=putative exported protein;protein_id=CAL13854.1;transl_table=11
AM286415.1	EMBL	gene	4178242	4179267	.	+	.	ID=gene3785;Name=YE3833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3833
AM286415.1	EMBL	CDS	4178242	4179267	.	+	0	ID=cds3685;Parent=gene3785;Dbxref=EnsemblGenomes-Gn:YE3833,EnsemblGenomes-Tr:CAL13855,GOA:A1JRP8,InterPro:IPR001638,InterPro:IPR018313,UniProtKB/TrEMBL:A1JRP8,NCBI_GP:CAL13855.1;Name=CAL13855.1;Note=Similar to Escherichia coli O157:H7 putative amino-acid ABC transporter binding protein YhdW precursor or z4629 or ecs4141 SWALL:YHDW_ECO57 (SWALL:P58068) (341 aa) fasta scores: E(): 6.1e-116%2C 84.45 38d in 341 aa%2C and to Rhizobium leguminosarum general L-amino acid-binding periplasmic protein AapJ precursor SWALL:AAPJ_RHILV (SWALL:Q52812) (341 aa) fasta scores: E(): 2.4e-79%2C 57.43 id in 343 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q52812;product=Putative ABC transporter periplasmic solute binding protein;protein_id=CAL13855.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4178350	4179036	.	+	.	ID=id6658;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 143.8%2C E-value 1.9e-40;gbkey=misc_feature;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	sequence_feature	4178416	4178457	.	+	.	ID=id6659;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01039
AM286415.1	EMBL	gene	4179474	4180652	.	+	.	ID=gene3786;Name=YE3834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3834
AM286415.1	EMBL	CDS	4179474	4180652	.	+	0	ID=cds3686;Parent=gene3786;Dbxref=EnsemblGenomes-Gn:YE3834,EnsemblGenomes-Tr:CAL13856,GOA:A1JRQ0,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JRQ0,NCBI_GP:CAL13856.1;Name=CAL13856.1;Note=Similar to Escherichia coli O157:H7 putative transport system permease protein yhdX or z4630 or ecs4142 SWALL:Q8X5G4 (EMBL:AE005554) (393 aa) fasta scores: E(): 1.8e-118%2C 76.92 38d in 390 aa%2C and to Rhizobium leguminosarum general L-amino acid transport system permease protein AapQ SWALL:AAPQ_RHILV (SWALL:Q52813) (400 aa) fasta scores: E(): 1.7e-65%2C 49.86 38d in 383 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q52813;product=Putative ABC transporter permease;protein_id=CAL13856.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4179531	4179590	.	+	.	ID=id6660;Note=9 probable transmembrane helices predicted for YE3834 by TMHMM2.0 at aa 20-39%2C 51-73%2C 88-110%2C 130-147%2C177-199%2C 212-234%2C 254-276%2C 333-352 and 362-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	4179624	4179692	.	+	.	ID=id6660;Note=9 probable transmembrane helices predicted for YE3834 by TMHMM2.0 at aa 20-39%2C 51-73%2C 88-110%2C 130-147%2C177-199%2C 212-234%2C 254-276%2C 333-352 and 362-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	4179735	4179803	.	+	.	ID=id6660;Note=9 probable transmembrane helices predicted for YE3834 by TMHMM2.0 at aa 20-39%2C 51-73%2C 88-110%2C 130-147%2C177-199%2C 212-234%2C 254-276%2C 333-352 and 362-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	4179861	4179914	.	+	.	ID=id6660;Note=9 probable transmembrane helices predicted for YE3834 by TMHMM2.0 at aa 20-39%2C 51-73%2C 88-110%2C 130-147%2C177-199%2C 212-234%2C 254-276%2C 333-352 and 362-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	4180002	4180070	.	+	.	ID=id6660;Note=9 probable transmembrane helices predicted for YE3834 by TMHMM2.0 at aa 20-39%2C 51-73%2C 88-110%2C 130-147%2C177-199%2C 212-234%2C 254-276%2C 333-352 and 362-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	4180107	4180175	.	+	.	ID=id6660;Note=9 probable transmembrane helices predicted for YE3834 by TMHMM2.0 at aa 20-39%2C 51-73%2C 88-110%2C 130-147%2C177-199%2C 212-234%2C 254-276%2C 333-352 and 362-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	4180233	4180301	.	+	.	ID=id6660;Note=9 probable transmembrane helices predicted for YE3834 by TMHMM2.0 at aa 20-39%2C 51-73%2C 88-110%2C 130-147%2C177-199%2C 212-234%2C 254-276%2C 333-352 and 362-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	4180470	4180529	.	+	.	ID=id6660;Note=9 probable transmembrane helices predicted for YE3834 by TMHMM2.0 at aa 20-39%2C 51-73%2C 88-110%2C 130-147%2C177-199%2C 212-234%2C 254-276%2C 333-352 and 362-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	4180557	4180625	.	+	.	ID=id6660;Note=9 probable transmembrane helices predicted for YE3834 by TMHMM2.0 at aa 20-39%2C 51-73%2C 88-110%2C 130-147%2C177-199%2C 212-234%2C 254-276%2C 333-352 and 362-384;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	4180317	4180544	.	+	.	ID=id6661;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 74.8%2C E-value 1.2e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	4180662	4181771	.	+	.	ID=gene3787;Name=YE3835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3835
AM286415.1	EMBL	CDS	4180662	4181771	.	+	0	ID=cds3687;Parent=gene3787;Dbxref=EnsemblGenomes-Gn:YE3835,EnsemblGenomes-Tr:CAL13857,GOA:A1JRQ1,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JRQ1,NCBI_GP:CAL13857.1;Name=CAL13857.1;Note=Similar to Escherichia coli hypothetical amino-acid ABC transporter permease protein YhdY or b3270 SWALL:YHDY_ECOLI (SWALL:P45768) (367 aa) fasta scores: E(): 4.9e-121%2C 80.81 38d in 370 aa%2C and to Rhizobium leguminosarum general L-amino acid transport system permease protein AapM SWALL:AAPM_RHILV (SWALL:Q52814) (384 aa) fasta scores: E(): 6e-60%2C 49.07 38d in 377 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q52814;product=Putative ABC transporter permease protein;protein_id=CAL13857.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4180773	4180841	.	+	.	ID=id6662;Note=7 probable transmembrane helices predicted for YE3835 by TMHMM2.0 at aa 38-60%2C 100-118%2C 128-150%2C 163-185%2C200-222%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	4180959	4181015	.	+	.	ID=id6662;Note=7 probable transmembrane helices predicted for YE3835 by TMHMM2.0 at aa 38-60%2C 100-118%2C 128-150%2C 163-185%2C200-222%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	4181043	4181111	.	+	.	ID=id6662;Note=7 probable transmembrane helices predicted for YE3835 by TMHMM2.0 at aa 38-60%2C 100-118%2C 128-150%2C 163-185%2C200-222%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	4181148	4181216	.	+	.	ID=id6662;Note=7 probable transmembrane helices predicted for YE3835 by TMHMM2.0 at aa 38-60%2C 100-118%2C 128-150%2C 163-185%2C200-222%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	4181259	4181327	.	+	.	ID=id6662;Note=7 probable transmembrane helices predicted for YE3835 by TMHMM2.0 at aa 38-60%2C 100-118%2C 128-150%2C 163-185%2C200-222%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	4181535	4181603	.	+	.	ID=id6662;Note=7 probable transmembrane helices predicted for YE3835 by TMHMM2.0 at aa 38-60%2C 100-118%2C 128-150%2C 163-185%2C200-222%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	4181646	4181714	.	+	.	ID=id6662;Note=7 probable transmembrane helices predicted for YE3835 by TMHMM2.0 at aa 38-60%2C 100-118%2C 128-150%2C 163-185%2C200-222%2C 292-314 and 329-351;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	4181424	4181660	.	+	.	ID=id6663;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 84.3%2C E-value 1.7e-22;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	4181768	4182541	.	+	.	ID=gene3788;Name=YE3836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3836
AM286415.1	EMBL	CDS	4181768	4182541	.	+	0	ID=cds3688;Parent=gene3788;Dbxref=EnsemblGenomes-Gn:YE3836,EnsemblGenomes-Tr:CAL13858,GOA:A1JRQ3,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JRQ3,NCBI_GP:CAL13858.1;Name=CAL13858.1;Note=Similar to Escherichia coli O157:H7 putative ATP-binding component of a transport system yhdZ or z4632 or ecs4144 SWALL:Q8X4T3 (EMBL:AE005554) (252 aa) fasta scores: E(): 2.9e-79%2C 89.02 38d in 246 aa%2C and to Rhizobium leguminosarum general L-amino acid transport ATP-binding protein AapP SWALL:AAPP_RHILV (SWALL:Q52815) (257 aa) fasta scores: E(): 1.4e-67%2C 74.89 38d in 243 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q52815;product=Putative ATP-binding component of an ABC transporter;protein_id=CAL13858.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4181894	4182451	.	+	.	ID=id6664;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 229.2%2C E-value 3.9e-66;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4181915	4181938	.	+	.	ID=id6665;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4182224	4182268	.	+	.	ID=id6666;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	4182612	4183301	.	-	.	ID=gene3789;Name=YE3837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3837
AM286415.1	EMBL	CDS	4182612	4183301	.	-	0	ID=cds3689;Parent=gene3789;Dbxref=EnsemblGenomes-Gn:YE3837,EnsemblGenomes-Tr:CAL13859,InterPro:IPR007300,UniProtKB/TrEMBL:A1JRQ4,NCBI_GP:CAL13859.1;Name=CAL13859.1;Note=Similar to Salmonella typhimurium putative inner membrane protein stm4272 SWALL:Q8ZKF9 (EMBL:AE008900) (229 aa) fasta scores: E(): 8e-63%2C 72.92 38d in 229 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008900;product=Putative inner membrane protein;protein_id=CAL13859.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4183245	4183313	.	-	.	ID=id6667;Note=6 probable transmembrane helices predicted for YE3837 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 108-130%2C167-189 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4183143	4183211	.	-	.	ID=id6667;Note=6 probable transmembrane helices predicted for YE3837 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 108-130%2C167-189 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4183047	4183115	.	-	.	ID=id6667;Note=6 probable transmembrane helices predicted for YE3837 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 108-130%2C167-189 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4182966	4183034	.	-	.	ID=id6667;Note=6 probable transmembrane helices predicted for YE3837 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 108-130%2C167-189 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4182789	4182857	.	-	.	ID=id6667;Note=6 probable transmembrane helices predicted for YE3837 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 108-130%2C167-189 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4182627	4182695	.	-	.	ID=id6667;Note=6 probable transmembrane helices predicted for YE3837 by TMHMM2.0 at aa 15-37%2C 49-71%2C 81-103%2C 108-130%2C167-189 and 221-243;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	4183848	4184774	.	+	.	ID=gene3790;Name=YE3838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3838
AM286415.1	EMBL	CDS	4183848	4184774	.	+	0	ID=cds3690;Parent=gene3790;Dbxref=EnsemblGenomes-Gn:YE3838,EnsemblGenomes-Tr:CAL13860,GOA:A1JRQ5,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JRQ5,NCBI_GP:CAL13860.1;Name=CAL13860.1;Note=Similar to Salmonella typhimurium putative transcriptional regulator%2C lysR family stm4270 SWALL:Q8ZKG0 (EMBL:AE008900) (295 aa) fasta scores: E(): 5.1e-78%2C 69.75 38d in 291 aa%2C and to Bacillus subtilis transcriptional regulatory protein GltC gltC SWALL:GLTC_BACSU (SWALL:P20668) (300 aa) fasta scores: E(): 2e-18%2C 26.19 38d in 294 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P20668;product=Putative LysR family transcriptional regulator;protein_id=CAL13860.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4183854	4184033	.	+	.	ID=id6668;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 102.1%2C E-value 6.9e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	4183896	4183988	.	+	.	ID=id6669;Note=PS00044 Bacterial regulatory proteins%2C lysR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00044
AM286415.1	EMBL	sequence_feature	4184103	4184723	.	+	.	ID=id6670;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 167.8%2C E-value 1.2e-47;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	4184781	4186430	.	-	.	ID=gene3791;Name=YE3839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3839
AM286415.1	EMBL	CDS	4184781	4186430	.	-	0	ID=cds3691;Parent=gene3791;Dbxref=EnsemblGenomes-Gn:YE3839,EnsemblGenomes-Tr:CAL13861,GOA:A1JRQ7,InterPro:IPR004705,InterPro:IPR006153,InterPro:IPR018422,UniProtKB/TrEMBL:A1JRQ7,NCBI_GP:CAL13861.1;Name=CAL13861.1;gbkey=CDS;product=putative putative Na(+)/H(+) exchanger protein;protein_id=CAL13861.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4185150	4186424	.	-	.	ID=id6671;Note=Pfam match to entry PF00999 Na_H_Exchanger%2CSodium/hydrogen exchanger family%2C score 373.0%2C E-value 2e-109;gbkey=misc_feature;inference=protein motif:PFAM:PF00999
AM286415.1	EMBL	sequence_feature	4186353	4186421	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	4186107	4186175	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	4186026	4186094	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	4185882	4185950	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	4185810	4185869	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	4185723	4185776	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	4185651	4185710	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	4185522	4185590	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	4185426	4185494	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	4185282	4185350	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	4185171	4185239	.	-	.	ID=id6672;Note=11 probable transmembrane helices predicted for YE3839 by TMHMM2.0 at aa 4-26%2C 86-108%2C 113-135%2C 161-183%2C188-207%2C 219-236%2C 241-260%2C 281-303%2C 313-335%2C 361-383 and 398-420;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	gene	4186646	4187911	.	-	.	ID=gene3792;Name=YE3840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3840
AM286415.1	EMBL	CDS	4186646	4187911	.	-	0	ID=cds3692;Parent=gene3792;Dbxref=EnsemblGenomes-Gn:YE3840,EnsemblGenomes-Tr:CAL13862,GOA:A1JRQ9,InterPro:IPR006043,UniProtKB/TrEMBL:A1JRQ9,NCBI_GP:CAL13862.1;Name=CAL13862.1;gbkey=CDS;product=putative xanthine/uracil permease;protein_id=CAL13862.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4187849	4187908	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	4187762	4187821	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	4187675	4187743	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	4187594	4187662	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	4187507	4187575	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	4187411	4187479	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	4187324	4187392	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	4187198	4187266	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	4187009	4187077	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	4186943	4186996	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	4186871	4186939	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	4186745	4186813	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	4186655	4186708	.	-	.	ID=id6673;Note=13 probable transmembrane helices predicted for YE3840 by TMHMM2.0 at aa 2-21%2C 31-50%2C 57-79%2C 84-106%2C113-135%2C 145-167%2C 174-196%2C 216-238%2C 279-301%2C 306-323%2C325-347%2C 367-389 and 402-419;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	sequence_feature	4186766	4187911	.	-	.	ID=id6674;Note=Pfam match to entry PF00860 xan_ur_permease%2CPermease family%2C score 323.4%2C E-value 1.7e-94;gbkey=misc_feature;inference=protein motif:PFAM:PF00860
AM286415.1	EMBL	sequence_feature	4186997	4187020	.	-	.	ID=id6675;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4187735	4187767	.	-	.	ID=id6676;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4188489	4189160	.	-	.	ID=gene3793;Name=YE3841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3841
AM286415.1	EMBL	CDS	4188489	4189160	.	-	0	ID=cds3693;Parent=gene3793;Dbxref=EnsemblGenomes-Gn:YE3841,EnsemblGenomes-Tr:CAL13863,GOA:A1JRR1,InterPro:IPR004045,InterPro:IPR004046,InterPro:IPR010987,InterPro:IPR012336,UniProtKB/TrEMBL:A1JRR1,NCBI_GP:CAL13863.1;Name=CAL13863.1;Note=Similar to Salmonella typhimurium putative glutathione S-transferase stm4267 SWALL:Q8ZKG3 (EMBL:AE008900) (222 aa) fasta scores: E(): 1.9e-50%2C54.26 38d in 223 aa%2C and to Pseudomonas syringae GstA gstA SWALL:Q9JP28 (EMBL:AF232004) (208 aa) fasta scores: E(): 5.5e-24%2C 45.53 38d in 224 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF232004;product=Putative glutathione S transferase;protein_id=CAL13863.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4188543	4188704	.	-	.	ID=id6677;Note=Pfam match to entry PF00043 GST_C%2C Glutathione S-transferase%2C C-terminal domain%2C score 23.4%2C E-value 1.7e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00043
AM286415.1	EMBL	sequence_feature	4188936	4189160	.	-	.	ID=id6678;Note=Pfam match to entry PF02798 GST_N%2C Glutathione S-transferase%2C N-terminal domain%2C score 64.6%2C E-value 1.4e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF02798
AM286415.1	EMBL	gene	4189423	4189725	.	+	.	ID=gene3794;Name=YE3842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3842
AM286415.1	EMBL	CDS	4189423	4189725	.	+	0	ID=cds3694;Parent=gene3794;Dbxref=EnsemblGenomes-Gn:YE3842,EnsemblGenomes-Tr:CAL13864,GOA:A1JRR2,InterPro:IPR001387,InterPro:IPR010982,UniProtKB/TrEMBL:A1JRR2,NCBI_GP:CAL13864.1;Name=CAL13864.1;Note=Similar to Ralstonia solanacearum putative transcription regulator protein hipB or rsp1252 or rs03197 SWALL:Q8XQH3 (EMBL:AL646083) (88 aa) fasta scores: E(): 7e-06%2C 37.5 38d in 88 aa%2C and to Ralstonia solanacearum putative transcription regulator protein rsc1447 or rs03860 SWALL:Q8XZF4 (EMBL:AL646064) (84 aa) fasta scores: E(): 4.5e-05%2C 40.58 38d in 69 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646083;product=putative transcriptional regulator;protein_id=CAL13864.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4189468	4189632	.	+	.	ID=id6679;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 46.7%2C E-value 3.4e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	gene	4189727	4191055	.	+	.	ID=gene3795;Name=YE3843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3843
AM286415.1	EMBL	CDS	4189727	4191055	.	+	0	ID=cds3695;Parent=gene3795;Dbxref=EnsemblGenomes-Gn:YE3843,EnsemblGenomes-Tr:CAL13865,InterPro:IPR012893,InterPro:IPR012894,InterPro:IPR017508,UniProtKB/TrEMBL:A1JRR4,NCBI_GP:CAL13865.1;Name=CAL13865.1;Note=Similar to Escherichia coli protein HipA or b1507 SWALL:HIPA_ECOLI (SWALL:P23874) (440 aa) fasta scores: E(): 5.4e-61%2C 39.95 38d in 433 aa%2C and to Ralstonia solanacearum putative HipA transcription regulator protein or rsc1446 or rs03861 SWALL:Q8XZF5 (EMBL:AL646064) (445 aa) fasta scores: E(): 3.3e-78%2C 47.22 38d in 432 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P23874;product=putative transcriptional regulator;protein_id=CAL13865.1;transl_table=11
AM286415.1	EMBL	gene	4191120	4191671	.	-	.	ID=gene3796;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;gene_synonym=exrB,lexC;locus_tag=YE3844
AM286415.1	EMBL	CDS	4191120	4191671	.	-	0	ID=cds3696;Parent=gene3796;Dbxref=EnsemblGenomes-Gn:YE3844,EnsemblGenomes-Tr:CAL13866,GOA:A1JRR5,InterPro:IPR000424,InterPro:IPR011344,InterPro:IPR012340,UniProtKB/TrEMBL:A1JRR5,NCBI_GP:CAL13866.1;Name=CAL13866.1;gbkey=CDS;gene=ssb;product=single-strand binding protein;protein_id=CAL13866.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4191330	4191656	.	-	.	ID=id6680;Note=Pfam match to entry PF00436 SSB%2C Single-strand binding protein family%2C score 226.6%2C E-value 2.4e-65;gbkey=misc_feature;gene=ssb;inference=protein motif:PFAM:PF00436
AM286415.1	EMBL	sequence_feature	4191486	4191515	.	-	.	ID=id6681;Note=PS00736 Single-strand binding protein family signature 2.;gbkey=misc_feature;gene=ssb;inference=protein motif:Prosite:PS00736
AM286415.1	EMBL	sequence_feature	4191618	4191656	.	-	.	ID=id6682;Note=PS00735 Single-strand binding protein family signature 1.;gbkey=misc_feature;gene=ssb;inference=protein motif:Prosite:PS00735
AM286415.1	EMBL	gene	4192071	4194902	.	+	.	ID=gene3797;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;gene_synonym=b4058,dinE;locus_tag=YE3845
AM286415.1	EMBL	CDS	4192071	4194902	.	+	0	ID=cds3697;Parent=gene3797;Dbxref=EnsemblGenomes-Gn:YE3845,EnsemblGenomes-Tr:CAL13867,GOA:A1JRR6,InterPro:IPR003439,InterPro:IPR004602,InterPro:IPR013815,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JRR6,NCBI_GP:CAL13867.1;Name=CAL13867.1;gbkey=CDS;gene=uvrA;product=excinuclease ABC subunit A;protein_id=CAL13867.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4192140	4193759	.	+	.	ID=id6683;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 9.1%2C E-value 6.9e-07;gbkey=misc_feature;gene=uvrA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4192161	4192184	.	+	.	ID=id6684;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=uvrA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4193286	4193303	.	+	.	ID=id6685;Note=PS00190 Cytochrome c family heme-binding site signature.;gbkey=misc_feature;gene=uvrA;inference=protein motif:Prosite:PS00190
AM286415.1	EMBL	sequence_feature	4193529	4193573	.	+	.	ID=id6686;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=uvrA;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	4193949	4193981	.	+	.	ID=id6687;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=uvrA;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4193967	4194785	.	+	.	ID=id6688;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 129.2%2C E-value 4.9e-36;gbkey=misc_feature;gene=uvrA;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4193988	4194011	.	+	.	ID=id6689;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=uvrA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4194558	4194602	.	+	.	ID=id6690;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=uvrA;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	4194961	4195314	.	-	.	ID=gene3798;Name=YE3846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3846
AM286415.1	EMBL	CDS	4194961	4195314	.	-	0	ID=cds3698;Parent=gene3798;Dbxref=EnsemblGenomes-Gn:YE3846,EnsemblGenomes-Tr:CAL13868,InterPro:IPR007351,UniProtKB/TrEMBL:A1JRR9,NCBI_GP:CAL13868.1;Name=CAL13868.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13868.1;transl_table=11
AM286415.1	EMBL	gene	4195781	4196974	.	-	.	ID=gene3799;Name=tyrB;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=YE3847
AM286415.1	EMBL	CDS	4195781	4196974	.	-	0	ID=cds3699;Parent=gene3799;Dbxref=EnsemblGenomes-Gn:YE3847,EnsemblGenomes-Tr:CAL13869,GOA:A1JRS0,InterPro:IPR000796,InterPro:IPR004838,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015424,UniProtKB/TrEMBL:A1JRS0,NCBI_GP:CAL13869.1;Name=CAL13869.1;gbkey=CDS;gene=tyrB;product=aromatic-amino-acid aminotransferase;protein_id=CAL13869.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4195784	4196734	.	-	.	ID=id6691;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 320.2%2C E-value 1.5e-93;gbkey=misc_feature;gene=tyrB;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	4196204	4196245	.	-	.	ID=id6692;Note=PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=tyrB;inference=protein motif:Prosite:PS00105
AM286415.1	EMBL	gene	4197032	4198111	.	-	.	ID=gene3800;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=YE3848
AM286415.1	EMBL	CDS	4197032	4198111	.	-	0	ID=cds3700;Parent=gene3800;Dbxref=EnsemblGenomes-Gn:YE3848,EnsemblGenomes-Tr:CAL13870,GOA:A1JRS1,InterPro:IPR000821,InterPro:IPR001608,InterPro:IPR009006,InterPro:IPR011079,InterPro:IPR020622,InterPro:IPR029066,UniProtKB/TrEMBL:A1JRS1,NCBI_GP:CAL13870.1;Name=CAL13870.1;gbkey=CDS;gene=alr;product=alanine racemase (biosynthetic);protein_id=CAL13870.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4197041	4198030	.	-	.	ID=id6693;Note=Pfam match to entry PF00842 Ala_racemase%2C Alanine racemase%2C score 608.7%2C E-value 2.2e-180;gbkey=misc_feature;gene=alr;inference=protein motif:PFAM:PF00842
AM286415.1	EMBL	sequence_feature	4197989	4198021	.	-	.	ID=id6694;Note=PS00395 Alanine racemase pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=alr;inference=protein motif:Prosite:PS00395
AM286415.1	EMBL	gene	4198141	4199547	.	-	.	ID=gene3801;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;gene_synonym=b4052,groP,grpA;locus_tag=YE3849
AM286415.1	EMBL	CDS	4198141	4199547	.	-	0	ID=cds3701;Parent=gene3801;Dbxref=EnsemblGenomes-Gn:YE3849,EnsemblGenomes-Tr:CAL13871,GOA:A1JRS2,InterPro:IPR003593,InterPro:IPR007692,InterPro:IPR007693,InterPro:IPR007694,InterPro:IPR016136,InterPro:IPR027417,UniProtKB/TrEMBL:A1JRS2,NCBI_GP:CAL13871.1;Name=CAL13871.1;gbkey=CDS;gene=dnaB;product=replicative DNA helicase;protein_id=CAL13871.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4198351	4198950	.	-	.	ID=id6695;Note=Pfam match to entry PF03796 DnaB_C%2C DnaB-like helicase C terminal domain%2C score 467.4%2C E-value 7.7e-138;gbkey=misc_feature;gene=dnaB;inference=protein motif:PFAM:PF03796
AM286415.1	EMBL	sequence_feature	4198843	4198866	.	-	.	ID=id6696;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=dnaB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4199173	4199484	.	-	.	ID=id6697;Note=Pfam match to entry PF00772 DnaB%2C DnaB-like helicase N terminal domain%2C score 192.3%2C E-value 4.9e-55;gbkey=misc_feature;gene=dnaB;inference=protein motif:PFAM:PF00772
AM286415.1	EMBL	gene	4199738	4200721	.	+	.	ID=gene3802;Name=qor;gbkey=Gene;gene=qor;gene_biotype=protein_coding;gene_synonym=b4051,hcz;locus_tag=YE3850
AM286415.1	EMBL	CDS	4199738	4200721	.	+	0	ID=cds3702;Parent=gene3802;Dbxref=EnsemblGenomes-Gn:YE3850,EnsemblGenomes-Tr:CAL13872,GOA:A1JRS4,InterPro:IPR002085,InterPro:IPR002364,InterPro:IPR011032,InterPro:IPR013149,InterPro:IPR013154,InterPro:IPR016040,UniProtKB/TrEMBL:A1JRS4,NCBI_GP:CAL13872.1;Name=CAL13872.1;gbkey=CDS;gene=qor;product=quinone oxidoreductase;protein_id=CAL13872.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4199765	4200718	.	+	.	ID=id6698;Note=Pfam match to entry PF00107 adh_zinc%2C Zinc-binding dehydrogenase%2C score 277.5%2C E-value 1.1e-80;gbkey=misc_feature;gene=qor;inference=protein motif:PFAM:PF00107
AM286415.1	EMBL	sequence_feature	4200158	4200223	.	+	.	ID=id6699;Note=PS01162 Quinone oxidoreductase / zeta-crystallin signature.;gbkey=misc_feature;gene=qor;inference=protein motif:Prosite:PS01162
AM286415.1	EMBL	sequence_feature	4200179	4200211	.	+	.	ID=id6700;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=qor;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4200934	4201260	.	+	.	ID=gene3803;Name=YE3851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3851
AM286415.1	EMBL	CDS	4200934	4201260	.	+	0	ID=cds3703;Parent=gene3803;Dbxref=EnsemblGenomes-Gn:YE3851,EnsemblGenomes-Tr:CAL13873,UniProtKB/TrEMBL:A1JRS5,NCBI_GP:CAL13873.1;Name=CAL13873.1;Note=No significant database hits;gbkey=CDS;product=Hypothetical protein;protein_id=CAL13873.1;transl_table=11
AM286415.1	EMBL	gene	4202026	4203054	.	-	.	ID=gene3804;Name=YE3852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3852
AM286415.1	EMBL	CDS	4202026	4203054	.	-	0	ID=cds3704;Parent=gene3804;Dbxref=EnsemblGenomes-Gn:YE3852,EnsemblGenomes-Tr:CAL13874,GOA:A1JRT5,InterPro:IPR001269,InterPro:IPR004653,InterPro:IPR013785,InterPro:IPR018517,UniProtKB/TrEMBL:A1JRT5,NCBI_GP:CAL13874.1;Name=CAL13874.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13874.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4202047	4202988	.	-	.	ID=id6701;Note=Pfam match to entry PF01207 UPF0034%2C Dihydrouridine synthase (Dus)%2C score 434.2%2C E-value 7.6e-128;gbkey=misc_feature;inference=protein motif:PFAM:PF01207
AM286415.1	EMBL	sequence_feature	4202695	4202751	.	-	.	ID=id6702;Note=PS01136 Uncharacterized protein family UPF0034 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01136
AM286415.1	EMBL	gene	4203328	4203837	.	+	.	ID=gene3805;Name=YE3853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3853
AM286415.1	EMBL	CDS	4203328	4203837	.	+	0	ID=cds3705;Parent=gene3805;Dbxref=EnsemblGenomes-Gn:YE3853,EnsemblGenomes-Tr:CAL13875,GOA:A1JRT7,InterPro:IPR002481,InterPro:IPR011991,UniProtKB/TrEMBL:A1JRT7,NCBI_GP:CAL13875.1;Name=CAL13875.1;gbkey=CDS;product=putative regulatory protein;protein_id=CAL13875.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4203382	4203747	.	+	.	ID=id6703;Note=Pfam match to entry PF01475 FUR%2C Ferric uptake regulator family%2C score 8.8%2C E-value 2.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF01475
AM286415.1	EMBL	gene	4204123	4204332	.	-	.	ID=gene3806;Name=YE3854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3854
AM286415.1	EMBL	CDS	4204123	4204332	.	-	0	ID=cds3706;Parent=gene3806;Dbxref=EnsemblGenomes-Gn:YE3854,EnsemblGenomes-Tr:CAL13876,InterPro:IPR008462,InterPro:IPR026042,UniProtKB/TrEMBL:A1JRT8,NCBI_GP:CAL13876.1;Name=CAL13876.1;Note=Similar to Escherichia coli%2C and Escherichia coli O157:H7 protein YjbJ or b4045 or z5644 or ecs5028 SWALL:YJBJ_ECOLI (SWALL:P32691) (69 aa) fasta scores: E(): 9.8e-21%2C 81.15 38d in 69 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P32691;product=Conserved hypothetical protein;protein_id=CAL13876.1;transl_table=11
AM286415.1	EMBL	gene	4204644	4205252	.	-	.	ID=gene3807;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;gene_synonym=b4043,exrA,spr,tsl,umuA;locus_tag=YE3855
AM286415.1	EMBL	CDS	4204644	4205252	.	-	0	ID=cds3707;Parent=gene3807;Dbxref=EnsemblGenomes-Gn:YE3855,EnsemblGenomes-Tr:CAL13877,GOA:A1JRT9,InterPro:IPR006197,InterPro:IPR006199,InterPro:IPR006200,InterPro:IPR011991,InterPro:IPR015927,InterPro:IPR019759,InterPro:IPR028360,NCBI_GP:CAL13877.1;Name=CAL13877.1;gbkey=CDS;gene=lexA;product=LexA repressor;protein_id=CAL13877.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4204704	4205030	.	-	.	ID=id6704;Note=Pfam match to entry PF00717 Peptidase_S24%2CPeptidase family S24%2C score 203.3%2C E-value 2.5e-58;gbkey=misc_feature;gene=lexA;inference=protein motif:PFAM:PF00717
AM286415.1	EMBL	sequence_feature	4205058	4205252	.	-	.	ID=id6705;Note=Pfam match to entry PF01726 LexA_DNA_bind%2C LexA DNA binding domain%2C score 135.9%2C E-value 4.6e-38;gbkey=misc_feature;gene=lexA;inference=protein motif:PFAM:PF01726
AM286415.1	EMBL	gene	4205380	4205748	.	-	.	ID=gene3808;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;gene_synonym=b4042;locus_tag=YE3856
AM286415.1	EMBL	CDS	4205380	4205748	.	-	0	ID=cds3708;Parent=gene3808;Dbxref=EnsemblGenomes-Gn:YE3856,EnsemblGenomes-Tr:CAL13878,GOA:A1JRU1,InterPro:IPR000829,UniProtKB/TrEMBL:A1JRU1,NCBI_GP:CAL13878.1;Name=CAL13878.1;gbkey=CDS;gene=dgkA;product=diacylglycerol kinase;protein_id=CAL13878.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4205392	4205727	.	-	.	ID=id6706;Note=Pfam match to entry PF01219 DAGK_prokar%2CProkaryotic diacylglycerol kinase%2C score 176.0%2C E-value 4e-50;gbkey=misc_feature;gene=dgkA;inference=protein motif:PFAM:PF01219
AM286415.1	EMBL	sequence_feature	4205602	4205661	.	-	.	ID=id6707;Note=3 probable transmembrane helices predicted for YE3856 by TMHMM2.0 at aa 30-49%2C 54-76 and 97-119;gbkey=misc_feature;gene=dgkA;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	4205521	4205589	.	-	.	ID=id6707;Note=3 probable transmembrane helices predicted for YE3856 by TMHMM2.0 at aa 30-49%2C 54-76 and 97-119;gbkey=misc_feature;gene=dgkA;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	4205392	4205460	.	-	.	ID=id6707;Note=3 probable transmembrane helices predicted for YE3856 by TMHMM2.0 at aa 30-49%2C 54-76 and 97-119;gbkey=misc_feature;gene=dgkA;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	4205506	4205541	.	-	.	ID=id6708;Note=PS01069 Prokaryotic diacylglycerol kinase signature.;gbkey=misc_feature;gene=dgkA;inference=protein motif:Prosite:PS01069
AM286415.1	EMBL	gene	4205874	4208342	.	+	.	ID=gene3809;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;gene_synonym=b4041;locus_tag=YE3857
AM286415.1	EMBL	CDS	4205874	4208342	.	+	0	ID=cds3709;Parent=gene3809;Dbxref=EnsemblGenomes-Gn:YE3857,EnsemblGenomes-Tr:CAL13879,GOA:A1JRU2,InterPro:IPR002123,InterPro:IPR022284,InterPro:IPR028354,NCBI_GP:CAL13879.1;Name=CAL13879.1;gbkey=CDS;gene=plsB;product=glycerol-3-phosphate acyltransferase;protein_id=CAL13879.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4206741	4207322	.	+	.	ID=id6709;Note=Pfam match to entry PF01553 Acyltransferase%2CAcyltransferase%2C score 154.1%2C E-value 1.6e-43;gbkey=misc_feature;gene=plsB;inference=protein motif:PFAM:PF01553
AM286415.1	EMBL	gene	4208400	4209266	.	-	.	ID=gene3810;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;gene_synonym=b4040,cyr;locus_tag=YE3858
AM286415.1	EMBL	CDS	4208400	4209266	.	-	0	ID=cds3710;Parent=gene3810;Dbxref=EnsemblGenomes-Gn:YE3858,EnsemblGenomes-Tr:CAL13880,GOA:A1JRU3,InterPro:IPR000537,InterPro:IPR006370,NCBI_GP:CAL13880.1;Name=CAL13880.1;gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=CAL13880.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4209153	4209206	.	-	.	ID=id6710;Note=7 probable transmembrane helices predicted for YE3858 by TMHMM2.0 at aa 21-38%2C 48-70%2C 98-120%2C 140-162%2C167-189%2C 229-251 and 268-287;gbkey=misc_feature;gene=ubiA;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	4209057	4209125	.	-	.	ID=id6710;Note=7 probable transmembrane helices predicted for YE3858 by TMHMM2.0 at aa 21-38%2C 48-70%2C 98-120%2C 140-162%2C167-189%2C 229-251 and 268-287;gbkey=misc_feature;gene=ubiA;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	4208907	4208975	.	-	.	ID=id6710;Note=7 probable transmembrane helices predicted for YE3858 by TMHMM2.0 at aa 21-38%2C 48-70%2C 98-120%2C 140-162%2C167-189%2C 229-251 and 268-287;gbkey=misc_feature;gene=ubiA;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	4208781	4208849	.	-	.	ID=id6710;Note=7 probable transmembrane helices predicted for YE3858 by TMHMM2.0 at aa 21-38%2C 48-70%2C 98-120%2C 140-162%2C167-189%2C 229-251 and 268-287;gbkey=misc_feature;gene=ubiA;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	4208700	4208768	.	-	.	ID=id6710;Note=7 probable transmembrane helices predicted for YE3858 by TMHMM2.0 at aa 21-38%2C 48-70%2C 98-120%2C 140-162%2C167-189%2C 229-251 and 268-287;gbkey=misc_feature;gene=ubiA;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	4208514	4208582	.	-	.	ID=id6710;Note=7 probable transmembrane helices predicted for YE3858 by TMHMM2.0 at aa 21-38%2C 48-70%2C 98-120%2C 140-162%2C167-189%2C 229-251 and 268-287;gbkey=misc_feature;gene=ubiA;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	4208406	4208465	.	-	.	ID=id6710;Note=7 probable transmembrane helices predicted for YE3858 by TMHMM2.0 at aa 21-38%2C 48-70%2C 98-120%2C 140-162%2C167-189%2C 229-251 and 268-287;gbkey=misc_feature;gene=ubiA;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	4208406	4209194	.	-	.	ID=id6711;Note=Pfam match to entry PF01040 UbiA%2C UbiA prenyltransferase family%2C score 270.1%2C E-value 1.9e-78;gbkey=misc_feature;gene=ubiA;inference=protein motif:PFAM:PF01040
AM286415.1	EMBL	sequence_feature	4209000	4209068	.	-	.	ID=id6712;Note=PS00943 UbiA prenyltransferase family signature.;gbkey=misc_feature;gene=ubiA;inference=protein motif:Prosite:PS00943
AM286415.1	EMBL	gene	4209291	4209797	.	-	.	ID=gene3811;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=YE3859
AM286415.1	EMBL	CDS	4209291	4209797	.	-	0	ID=cds3711;Parent=gene3811;Dbxref=EnsemblGenomes-Gn:YE3859,EnsemblGenomes-Tr:CAL13881,GOA:A1JRU5,InterPro:IPR007440,InterPro:IPR028978,NCBI_GP:CAL13881.1;Name=CAL13881.1;gbkey=CDS;gene=ubiC;product=putative chorismate--pyruvate lyase;protein_id=CAL13881.1;transl_table=11
AM286415.1	EMBL	gene	4209936	4212857	.	-	.	ID=gene3812;Name=YE3860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3860
AM286415.1	EMBL	CDS	4209936	4212857	.	-	0	ID=cds3712;Parent=gene3812;Dbxref=EnsemblGenomes-Gn:YE3860,EnsemblGenomes-Tr:CAL13882,GOA:A1JRU6,InterPro:IPR011009,UniProtKB/TrEMBL:A1JRU6,NCBI_GP:CAL13882.1;Name=CAL13882.1;Note=Similar to Shigella flexneri%2C and Shigella flexneri 2A OspG%2C secreted by the mxi-spa secretion machinery%2Cfunction unknown ospG or s0237 SWALL:Q99PZ6 (EMBL:AL391753) (196 aa) fasta scores: E(): 1.3e-09%2C37.32 38d in 142 aa%2C and to Escherichia coli O157:H7 hypothetical protein Z0989 z0989 or ecs0848 SWALL:Q8X831 (EMBL:AE005258) (293 aa) fasta scores: E(): 2.2e-05%2C35.29 38d in 153 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL391753;product=putative exported protein;protein_id=CAL13882.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4210947	4210973	.	-	.	ID=id6713;Note=PS00037 Myb DNA-binding domain repeat signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00037
AM286415.1	EMBL	gene	4213110	4214045	.	-	.	ID=gene3813;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;gene_synonym=molA;locus_tag=YE3861
AM286415.1	EMBL	CDS	4213110	4214045	.	-	0	ID=cds3713;Parent=gene3813;Dbxref=EnsemblGenomes-Gn:YE3861,EnsemblGenomes-Tr:CAL13883,GOA:A1JRU7,InterPro:IPR010794,UniProtKB/TrEMBL:A1JRU7,NCBI_GP:CAL13883.1;Name=CAL13883.1;gbkey=CDS;gene=malM;product=maltose operon periplasmic protein;protein_id=CAL13883.1;transl_table=11
AM286415.1	EMBL	gene	4214265	4215551	.	-	.	ID=gene3814;Name=lamB;gbkey=Gene;gene=lamB;gene_biotype=protein_coding;gene_synonym=malB;locus_tag=YE3862
AM286415.1	EMBL	CDS	4214265	4215551	.	-	0	ID=cds3714;Parent=gene3814;Dbxref=EnsemblGenomes-Gn:YE3862,EnsemblGenomes-Tr:CAL13884,GOA:A1JRU8,InterPro:IPR003192,InterPro:IPR023738,NCBI_GP:CAL13884.1;Name=CAL13884.1;gbkey=CDS;gene=lamB;product=maltoporin;protein_id=CAL13884.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4214268	4215473	.	-	.	ID=id6714;Note=Pfam match to entry PF02264 LamB%2C LamB porin %2Cscore 769.2%2C E-value 1.1e-228;gbkey=misc_feature;gene=lamB;inference=protein motif:PFAM:PF02264
AM286415.1	EMBL	sequence_feature	4214307	4214330	.	-	.	ID=id6715;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=lamB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4215623	4216738	.	-	.	ID=gene3815;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=YE3863
AM286415.1	EMBL	CDS	4215623	4216738	.	-	0	ID=cds3715;Parent=gene3815;Dbxref=EnsemblGenomes-Gn:YE3863,EnsemblGenomes-Tr:CAL13885,GOA:A1JRV0,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR008995,InterPro:IPR012340,InterPro:IPR013611,InterPro:IPR015855,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JRV0,NCBI_GP:CAL13885.1;Name=CAL13885.1;gbkey=CDS;gene=malK;product=maltose/maltodextrin transport ATP-binding protein;protein_id=CAL13885.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4215677	4215859	.	-	.	ID=id6716;Note=Pfam match to entry PF03459 TOBE%2C TOBE domain %2Cscore 32.9%2C E-value 4.9e-07;gbkey=misc_feature;gene=malK;inference=protein motif:PFAM:PF03459
AM286415.1	EMBL	sequence_feature	4215863	4216033	.	-	.	ID=id6717;Note=Pfam match to entry PF03459 TOBE%2C TOBE domain %2Cscore 43.0%2C E-value 4.4e-10;gbkey=misc_feature;gene=malK;inference=protein motif:PFAM:PF03459
AM286415.1	EMBL	sequence_feature	4216109	4216654	.	-	.	ID=id6718;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 224.8%2C E-value 8.1e-65;gbkey=misc_feature;gene=malK;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4216295	4216339	.	-	.	ID=id6719;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=malK;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	4216610	4216633	.	-	.	ID=id6720;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=malK;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4216726	4216926	.	-	.	ID=gene3816;Name=YE3864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3864
AM286415.1	EMBL	CDS	4216726	4216926	.	-	0	ID=cds3716;Parent=gene3816;Dbxref=EnsemblGenomes-Gn:YE3864,EnsemblGenomes-Tr:CAL13886,UniProtKB/TrEMBL:A1JRV2,NCBI_GP:CAL13886.1;Name=CAL13886.1;Note=Doubtful CDS;gbkey=CDS;product=Hypothetical protein;protein_id=CAL13886.1;transl_table=11
AM286415.1	EMBL	gene	4217386	4218597	.	+	.	ID=gene3817;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=YE3866
AM286415.1	EMBL	CDS	4217386	4218597	.	+	0	ID=cds3717;Parent=gene3817;Dbxref=EnsemblGenomes-Gn:YE3866,EnsemblGenomes-Tr:CAL13887,GOA:A1JRV3,InterPro:IPR006059,InterPro:IPR006060,InterPro:IPR006061,UniProtKB/TrEMBL:A1JRV3,NCBI_GP:CAL13887.1;Name=CAL13887.1;gbkey=CDS;gene=malE;product=maltose-binding periplasmic protein precursor;protein_id=CAL13887.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4217518	4218570	.	+	.	ID=id6721;Note=Pfam match to entry PF01547 SBP_bac_1%2C Bacterial extracellular solute-binding protein%2C score 257.7%2CE-value 1e-74;gbkey=misc_feature;gene=malE;inference=protein motif:PFAM:PF01547
AM286415.1	EMBL	sequence_feature	4217803	4217856	.	+	.	ID=id6722;Note=PS01037 Bacterial extracellular solute-binding proteins%2C family 1 signature.;gbkey=misc_feature;gene=malE;inference=protein motif:Prosite:PS01037
AM286415.1	EMBL	gene	4218807	4220384	.	+	.	ID=gene3818;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=YE3867
AM286415.1	EMBL	CDS	4218807	4220384	.	+	0	ID=cds3718;Parent=gene3818;Dbxref=EnsemblGenomes-Gn:YE3867,EnsemblGenomes-Tr:CAL13888,GOA:A1JRV5,InterPro:IPR000515,InterPro:IPR029345,UniProtKB/TrEMBL:A1JRV5,NCBI_GP:CAL13888.1;Name=CAL13888.1;gbkey=CDS;gene=malF;product=maltose transport system permease protein MalF;protein_id=CAL13888.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4218867	4218935	.	+	.	ID=id6723;Note=8 probable transmembrane helices predicted for YE3867 by TMHMM2.0 at aa 21-43%2C 48-65%2C 78-100%2C 295-317%2C330-352%2C 381-403%2C 424-446 and 495-517;gbkey=misc_feature;gene=malF;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	4218948	4219001	.	+	.	ID=id6723;Note=8 probable transmembrane helices predicted for YE3867 by TMHMM2.0 at aa 21-43%2C 48-65%2C 78-100%2C 295-317%2C330-352%2C 381-403%2C 424-446 and 495-517;gbkey=misc_feature;gene=malF;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	4219038	4219106	.	+	.	ID=id6723;Note=8 probable transmembrane helices predicted for YE3867 by TMHMM2.0 at aa 21-43%2C 48-65%2C 78-100%2C 295-317%2C330-352%2C 381-403%2C 424-446 and 495-517;gbkey=misc_feature;gene=malF;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	4219689	4219757	.	+	.	ID=id6723;Note=8 probable transmembrane helices predicted for YE3867 by TMHMM2.0 at aa 21-43%2C 48-65%2C 78-100%2C 295-317%2C330-352%2C 381-403%2C 424-446 and 495-517;gbkey=misc_feature;gene=malF;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	4219794	4219862	.	+	.	ID=id6723;Note=8 probable transmembrane helices predicted for YE3867 by TMHMM2.0 at aa 21-43%2C 48-65%2C 78-100%2C 295-317%2C330-352%2C 381-403%2C 424-446 and 495-517;gbkey=misc_feature;gene=malF;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	4219947	4220015	.	+	.	ID=id6723;Note=8 probable transmembrane helices predicted for YE3867 by TMHMM2.0 at aa 21-43%2C 48-65%2C 78-100%2C 295-317%2C330-352%2C 381-403%2C 424-446 and 495-517;gbkey=misc_feature;gene=malF;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	4220076	4220144	.	+	.	ID=id6723;Note=8 probable transmembrane helices predicted for YE3867 by TMHMM2.0 at aa 21-43%2C 48-65%2C 78-100%2C 295-317%2C330-352%2C 381-403%2C 424-446 and 495-517;gbkey=misc_feature;gene=malF;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	4220289	4220357	.	+	.	ID=id6723;Note=8 probable transmembrane helices predicted for YE3867 by TMHMM2.0 at aa 21-43%2C 48-65%2C 78-100%2C 295-317%2C330-352%2C 381-403%2C 424-446 and 495-517;gbkey=misc_feature;gene=malF;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	4219719	4219751	.	+	.	ID=id6724;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=malF;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4220010	4220255	.	+	.	ID=id6725;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 67.2%2C E-value 2.2e-17;gbkey=misc_feature;gene=malF;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	4220013	4220099	.	+	.	ID=id6726;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=malF;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	4220398	4221288	.	+	.	ID=gene3819;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=YE3868
AM286415.1	EMBL	CDS	4220398	4221288	.	+	0	ID=cds3719;Parent=gene3819;Dbxref=EnsemblGenomes-Gn:YE3868,EnsemblGenomes-Tr:CAL13889,GOA:A1JRV6,InterPro:IPR000515,UniProtKB/TrEMBL:A1JRV6,NCBI_GP:CAL13889.1;Name=CAL13889.1;gbkey=CDS;gene=malG;product=maltose transport system permease protein MalG;protein_id=CAL13889.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4220434	4220502	.	+	.	ID=id6727;Note=6 probable transmembrane helices predicted for YE3868 by TMHMM2.0 at aa 13-35%2C 89-111%2C 124-143%2C 153-175%2C205-227 and 258-280;gbkey=misc_feature;gene=malG;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4220662	4220730	.	+	.	ID=id6727;Note=6 probable transmembrane helices predicted for YE3868 by TMHMM2.0 at aa 13-35%2C 89-111%2C 124-143%2C 153-175%2C205-227 and 258-280;gbkey=misc_feature;gene=malG;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4220767	4220826	.	+	.	ID=id6727;Note=6 probable transmembrane helices predicted for YE3868 by TMHMM2.0 at aa 13-35%2C 89-111%2C 124-143%2C 153-175%2C205-227 and 258-280;gbkey=misc_feature;gene=malG;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4220854	4220922	.	+	.	ID=id6727;Note=6 probable transmembrane helices predicted for YE3868 by TMHMM2.0 at aa 13-35%2C 89-111%2C 124-143%2C 153-175%2C205-227 and 258-280;gbkey=misc_feature;gene=malG;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4221010	4221078	.	+	.	ID=id6727;Note=6 probable transmembrane helices predicted for YE3868 by TMHMM2.0 at aa 13-35%2C 89-111%2C 124-143%2C 153-175%2C205-227 and 258-280;gbkey=misc_feature;gene=malG;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4221169	4221237	.	+	.	ID=id6727;Note=6 probable transmembrane helices predicted for YE3868 by TMHMM2.0 at aa 13-35%2C 89-111%2C 124-143%2C 153-175%2C205-227 and 258-280;gbkey=misc_feature;gene=malG;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	4220935	4221159	.	+	.	ID=id6728;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 64.4%2C E-value 1.6e-16;gbkey=misc_feature;gene=malG;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	4220938	4221024	.	+	.	ID=id6729;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=malG;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	4221513	4221920	.	-	.	ID=gene3820;Name=YE3869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3869
AM286415.1	EMBL	CDS	4221513	4221920	.	-	0	ID=cds3720;Parent=gene3820;Dbxref=EnsemblGenomes-Gn:YE3869,EnsemblGenomes-Tr:CAL13890,GOA:A1JRV7,InterPro:IPR009315,InterPro:IPR020948,NCBI_GP:CAL13890.1;Name=CAL13890.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13890.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4221819	4221872	.	-	.	ID=id6730;Note=4 probable transmembrane helices predicted for YE3869 by TMHMM2.0 at aa 17-34%2C 54-76%2C 83-102 and 112-129;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	4221693	4221761	.	-	.	ID=id6730;Note=4 probable transmembrane helices predicted for YE3869 by TMHMM2.0 at aa 17-34%2C 54-76%2C 83-102 and 112-129;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	4221615	4221674	.	-	.	ID=id6730;Note=4 probable transmembrane helices predicted for YE3869 by TMHMM2.0 at aa 17-34%2C 54-76%2C 83-102 and 112-129;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	4221534	4221587	.	-	.	ID=id6730;Note=4 probable transmembrane helices predicted for YE3869 by TMHMM2.0 at aa 17-34%2C 54-76%2C 83-102 and 112-129;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	4222024	4223670	.	-	.	ID=gene3821;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=YE3870
AM286415.1	EMBL	CDS	4222024	4223670	.	-	0	ID=cds3721;Parent=gene3821;Dbxref=EnsemblGenomes-Gn:YE3870,EnsemblGenomes-Tr:CAL13891,GOA:A1JRV9,InterPro:IPR001672,InterPro:IPR018189,InterPro:IPR023096,NCBI_GP:CAL13891.1;Name=CAL13891.1;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=CAL13891.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4222048	4223517	.	-	.	ID=id6731;Note=Pfam match to entry PF00342 PGI%2C Phosphoglucose isomerase%2C score 1103.8%2C E-value 0;gbkey=misc_feature;gene=pgi;inference=protein motif:PFAM:PF00342
AM286415.1	EMBL	sequence_feature	4222129	4222182	.	-	.	ID=id6732;Note=PS00174 Phosphoglucose isomerase signature 2.;gbkey=misc_feature;gene=pgi;inference=protein motif:Prosite:PS00174
AM286415.1	EMBL	sequence_feature	4222837	4222878	.	-	.	ID=id6733;Note=PS00765 Phosphoglucose isomerase signature 1.;gbkey=misc_feature;gene=pgi;inference=protein motif:Prosite:PS00765
AM286415.1	EMBL	gene	4224330	4225640	.	+	.	ID=gene3822;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;gene_synonym=apk;locus_tag=YE3873
AM286415.1	EMBL	CDS	4224330	4225640	.	+	0	ID=cds3722;Parent=gene3822;Dbxref=EnsemblGenomes-Gn:YE3873,EnsemblGenomes-Tr:CAL13892,GOA:A1JRW0,InterPro:IPR001048,InterPro:IPR001341,InterPro:IPR002912,InterPro:IPR005260,UniProtKB/TrEMBL:A1JRW0,NCBI_GP:CAL13892.1;Name=CAL13892.1;gbkey=CDS;gene=lysC;product=lysine-sensitive aspartokinase III;protein_id=CAL13892.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4224330	4225124	.	+	.	ID=id6734;Note=Pfam match to entry PF00696 aakinase%2C Amino acid kinase family%2C score 158.1%2C E-value 9.7e-45;gbkey=misc_feature;gene=lysC;inference=protein motif:PFAM:PF00696
AM286415.1	EMBL	sequence_feature	4225215	4225448	.	+	.	ID=id6735;Note=Pfam match to entry PF01842 ACT%2C ACT domain%2C score 28.7%2C E-value 9.1e-06;gbkey=misc_feature;gene=lysC;inference=protein motif:PFAM:PF01842
AM286415.1	EMBL	sequence_feature	4225458	4225490	.	+	.	ID=id6736;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=lysC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4225782	4226258	.	-	.	ID=gene3823;Name=YE3874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3874
AM286415.1	EMBL	CDS	4225782	4226258	.	-	0	ID=cds3723;Parent=gene3823;Dbxref=EnsemblGenomes-Gn:YE3874,EnsemblGenomes-Tr:CAL13893,UniProtKB/TrEMBL:A1JRW3,NCBI_GP:CAL13893.1;Name=CAL13893.1;gbkey=CDS;product=Hypothetical protein;protein_id=CAL13893.1;transl_table=11
AM286415.1	EMBL	gene	4226279	4229974	.	-	.	ID=gene3824;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=YE3875
AM286415.1	EMBL	CDS	4226279	4229974	.	-	0	ID=cds3724;Parent=gene3824;Dbxref=EnsemblGenomes-Gn:YE3875,EnsemblGenomes-Tr:CAL13894,GOA:A1JRW4,InterPro:IPR000489,InterPro:IPR003726,InterPro:IPR003759,InterPro:IPR004223,InterPro:IPR006158,InterPro:IPR011005,InterPro:IPR011822,UniProtKB/TrEMBL:A1JRW4,NCBI_GP:CAL13894.1;Name=CAL13894.1;gbkey=CDS;gene=metH;product=5-Methyltetrahydrofolate--homocysteine methyltransferase;protein_id=CAL13894.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4226387	4227247	.	-	.	ID=id6737;Note=Pfam match to entry PF02965 Met_synt_B12%2C Vitamin B12 dependent methionine synthase%2C activation domain %2Cscore 597.1%2C E-value 6.8e-177;gbkey=misc_feature;gene=metH;inference=protein motif:PFAM:PF02965
AM286415.1	EMBL	sequence_feature	4227368	4227724	.	-	.	ID=id6738;Note=Pfam match to entry PF02310 B12-binding%2C B12 binding domain%2C score 182.6%2C E-value 4e-52;gbkey=misc_feature;gene=metH;inference=protein motif:PFAM:PF02310
AM286415.1	EMBL	sequence_feature	4227737	4228012	.	-	.	ID=id6739;Note=Pfam match to entry PF02607 B12-binding_2%2C B12 binding domain%2C score 167.8%2C E-value 1.2e-47;gbkey=misc_feature;gene=metH;inference=protein motif:PFAM:PF02607
AM286415.1	EMBL	sequence_feature	4228148	4228894	.	-	.	ID=id6740;Note=Pfam match to entry PF00809 Pterin_bind%2C Pterin binding enzyme%2C score 325.0%2C E-value 5.6e-95;gbkey=misc_feature;gene=metH;inference=protein motif:PFAM:PF00809
AM286415.1	EMBL	sequence_feature	4228979	4229914	.	-	.	ID=id6741;Note=Pfam match to entry PF02574 S-methyl_trans%2CHomocysteine S-methyltransferase%2C score 531.4%2C E-value 4.2e-157;gbkey=misc_feature;gene=metH;inference=protein motif:PFAM:PF02574
AM286415.1	EMBL	gene	4230215	4231054	.	+	.	ID=gene3825;Name=YE3876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3876
AM286415.1	EMBL	CDS	4230215	4231054	.	+	0	ID=cds3725;Parent=gene3825;Dbxref=EnsemblGenomes-Gn:YE3876,EnsemblGenomes-Tr:CAL13895,GOA:A1JRW6,InterPro:IPR005471,InterPro:IPR011991,InterPro:IPR014757,InterPro:IPR029016,UniProtKB/TrEMBL:A1JRW6,NCBI_GP:CAL13895.1;Name=CAL13895.1;Note=Similar to Escherichia coli acetate operon repressor IclR or b4018 SWALL:ICLR_ECOLI (SWALL:P16528) (274 aa) fasta scores: E(): 1e-82%2C 78.26 38d in 276 aa%2Cand to Escherichia coli%2C and Escherichia coli O157:H7 negative regulator of allantoin and glyoxylate utilization operons allR or glxa3 or b0506 or z0660 or ecs0567 SWALL:ALLR_ECOLI (SWALL:P77734) (271 aa) fasta scores: E(): 1.8e-36%2C 39.55 38d in 268 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P77734;product=Putative IclR family transcriptional regulator;protein_id=CAL13895.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4230467	4231030	.	+	.	ID=id6742;Note=Pfam match to entry PF01614 IclR%2C Bacterial transcriptional regulator%2C score 257.2%2C E-value 1.4e-74;gbkey=misc_feature;inference=protein motif:PFAM:PF01614
AM286415.1	EMBL	sequence_feature	4230845	4230910	.	+	.	ID=id6743;Note=PS01051 Bacterial regulatory proteins%2C iclR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01051
AM286415.1	EMBL	repeat_region	4231111	4232470	.	-	.	ID=id6744;Note=IS1329-like insertion sequence element IS1666;gbkey=repeat_region
AM286415.1	EMBL	gene	4231120	4231977	.	-	.	ID=gene3826;Name=YE3877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3877
AM286415.1	EMBL	CDS	4231120	4231977	.	-	0	ID=cds3726;Parent=gene3826;Dbxref=EnsemblGenomes-Gn:YE3877,EnsemblGenomes-Tr:CAL13896,GOA:A1JRW7,InterPro:IPR001584,InterPro:IPR012337,UniProtKB/TrEMBL:A1JRW7,NCBI_GP:CAL13896.1;Name=CAL13896.1;Note=Similar to many insertion sequence proteins including: Yersinia enterocolitica IS1329 transposase B SWALL:Q9X9I3 (EMBL:AJ132945) (249 aa) fasta scores: E(): 6.7e-32%2C 39.75 38d in 244 aa and Shigella flexneri 2A InsB Cp0269 SWALL:Q8VS98 (EMBL:AF386526) (279 aa) fasta scores: E(): 6e-90%2C 72 38d in 275 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ132945;product=hypothetical protein located on insertion sequence element IS1666;protein_id=CAL13896.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4231162	4231644	.	-	.	ID=id6745;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 162.4%2C E-value 5e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286415.1	EMBL	gene	4231986	4232285	.	-	.	ID=gene3827;Name=YE3878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3878
AM286415.1	EMBL	CDS	4231986	4232285	.	-	0	ID=cds3727;Parent=gene3827;Dbxref=EnsemblGenomes-Gn:YE3878,EnsemblGenomes-Tr:CAL13897,GOA:A1JRW8,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JRW8,NCBI_GP:CAL13897.1;Name=CAL13897.1;Note=Similar to many transposases including: Yersinia enterocolitica IS1329 transposase A SWALL:Q9X9I2 (EMBL:AJ132945) (110 aa) fasta scores: E(): 1.4e-10%2C 40.2 id in 97 aa and Shigella dysenteriae transposase InsN for insertion sequence element IS911 InsN SWALL:INSN_SHIDY (SWALL:P39213) (112 aa) fasta scores: E(): 2.2e-22%2C 70.1 id in 97 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P39213;product=putative transposase for insertion sequence element IS1666;protein_id=CAL13897.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4232013	4232279	.	-	.	ID=id6746;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 74.8%2C E-value 1.2e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF01527
AM286415.1	EMBL	gene	4232593	4234320	.	-	.	ID=gene3828;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=YE3879
AM286415.1	EMBL	CDS	4232593	4234320	.	-	0	ID=cds3728;Parent=gene3828;Dbxref=EnsemblGenomes-Gn:YE3879,EnsemblGenomes-Tr:CAL13898,GOA:A1JRX0,InterPro:IPR010452,NCBI_GP:CAL13898.1;Name=CAL13898.1;gbkey=CDS;gene=aceK;product=isocitrate dehydrogenase kinase/phosphatase;protein_id=CAL13898.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4233436	4233459	.	-	.	ID=id6747;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=aceK;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4233529	4233615	.	-	.	ID=id6748;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=aceK;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	4234397	4235704	.	-	.	ID=gene3829;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;gene_synonym=icl;locus_tag=YE3880
AM286415.1	EMBL	CDS	4234397	4235704	.	-	0	ID=cds3729;Parent=gene3829;Dbxref=EnsemblGenomes-Gn:YE3880,EnsemblGenomes-Tr:CAL13899,GOA:A1JRX1,InterPro:IPR006254,InterPro:IPR015813,InterPro:IPR018523,UniProtKB/TrEMBL:A1JRX1,NCBI_GP:CAL13899.1;Name=CAL13899.1;gbkey=CDS;gene=aceA;product=isocitrate lyase;protein_id=CAL13899.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4234400	4235683	.	-	.	ID=id6749;Note=Pfam match to entry PF00463 ICL%2C Isocitrate lyase family%2C score 887.5%2C E-value 2.6e-264;gbkey=misc_feature;gene=aceA;inference=protein motif:PFAM:PF00463
AM286415.1	EMBL	sequence_feature	4234856	4234879	.	-	.	ID=id6750;Note=PS00030 Eukaryotic putative RNA-binding region RNP-1 signature.;gbkey=misc_feature;gene=aceA;inference=protein motif:Prosite:PS00030
AM286415.1	EMBL	sequence_feature	4235108	4235125	.	-	.	ID=id6751;Note=PS00161 Isocitrate lyase signature.;gbkey=misc_feature;gene=aceA;inference=protein motif:Prosite:PS00161
AM286415.1	EMBL	gene	4235877	4237475	.	-	.	ID=gene3830;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;gene_synonym=mas;locus_tag=YE3881
AM286415.1	EMBL	CDS	4235877	4237475	.	-	0	ID=cds3730;Parent=gene3830;Dbxref=EnsemblGenomes-Gn:YE3881,EnsemblGenomes-Tr:CAL13900,GOA:A1JRX8,InterPro:IPR001465,InterPro:IPR006252,InterPro:IPR011076,UniProtKB/TrEMBL:A1JRX8,NCBI_GP:CAL13900.1;Name=CAL13900.1;gbkey=CDS;gene=aceB;product=malate synthase A;protein_id=CAL13900.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4235880	4237448	.	-	.	ID=id6752;Note=Pfam match to entry PF01274 Malate_synthase%2C Malate synthase%2C score 1042.6%2C E-value 0;gbkey=misc_feature;gene=aceB;inference=protein motif:PFAM:PF01274
AM286415.1	EMBL	gene	4237881	4238810	.	-	.	ID=gene3831;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=YE3882
AM286415.1	EMBL	CDS	4237881	4238810	.	-	0	ID=cds3731;Parent=gene3831;Dbxref=EnsemblGenomes-Gn:YE3882,EnsemblGenomes-Tr:CAL13901,GOA:A1JRX9,InterPro:IPR005697,InterPro:IPR029062,NCBI_GP:CAL13901.1;Name=CAL13901.1;gbkey=CDS;gene=metA;product=homoserine O-succinyltransferase;protein_id=CAL13901.1;transl_table=11
AM286415.1	EMBL	gene	4239160	4239290	.	-	.	ID=gene3832;Name=5S rRNA;gbkey=Gene;gene=5S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	4239160	4239290	.	-	.	ID=rna135;Parent=gene3832;Note=similar to part of the 5SrRNA;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	exon	4239160	4239290	.	-	.	ID=id6753;Parent=rna135;Note=similar to part of the 5SrRNA;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	gene	4239324	4239399	.	-	.	ID=gene3833;Name=tRNA-Thr (GGT);gbkey=Gene;gene=tRNA-Thr (GGT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	4239324	4239399	.	-	.	ID=rna136;Parent=gene3833;gbkey=tRNA;gene=tRNA-Thr (GGT);product=tRNA-Thr
AM286415.1	EMBL	exon	4239324	4239399	.	-	.	ID=id6754;Parent=rna136;gbkey=tRNA;gene=tRNA-Thr (GGT);product=tRNA-Thr
AM286415.1	EMBL	gene	4239407	4239648	.	-	.	ID=gene3834;Name=5S rRNA;gbkey=Gene;gene=5S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	4239407	4239648	.	-	.	ID=rna137;Parent=gene3834;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	exon	4239407	4239648	.	-	.	ID=id6755;Parent=rna137;Note=match to 5SrRNA 1..240 Y.enterocolitica;gbkey=rRNA;gene=5S rRNA;product=5S ribosomal RNA
AM286415.1	EMBL	gene	4239648	4242641	.	-	.	ID=gene3835;Name=23S rRNA;gbkey=Gene;gene=23S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	4239648	4242641	.	-	.	ID=rna138;Parent=gene3835;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	exon	4239648	4242641	.	-	.	ID=id6756;Parent=rna138;Note=match to 23S_rRNA 1..2994 (Y. enterocolitica 23S EMBL:U77925%2C Y.pestis KIM 98 38dentity%2C Citrobacter freundii 23S EMBL:U77928 94 38dentity);gbkey=rRNA;gene=23S rRNA;product=23S ribosomal RNA
AM286415.1	EMBL	gene	4242987	4243062	.	-	.	ID=gene3836;Name=tRNA-Ala (TGC);gbkey=Gene;gene=tRNA-Ala (TGC);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	4242987	4243062	.	-	.	ID=rna139;Parent=gene3836;gbkey=tRNA;gene=tRNA-Ala (TGC);product=tRNA-Ala
AM286415.1	EMBL	exon	4242987	4243062	.	-	.	ID=id6757;Parent=rna139;gbkey=tRNA;gene=tRNA-Ala (TGC);product=tRNA-Ala
AM286415.1	EMBL	gene	4243137	4243213	.	-	.	ID=gene3837;Name=tRNA-Ile (GAT);gbkey=Gene;gene=tRNA-Ile (GAT);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	4243137	4243213	.	-	.	ID=rna140;Parent=gene3837;gbkey=tRNA;gene=tRNA-Ile (GAT);product=tRNA-Ile
AM286415.1	EMBL	exon	4243137	4243213	.	-	.	ID=id6758;Parent=rna140;gbkey=tRNA;gene=tRNA-Ile (GAT);product=tRNA-Ile
AM286415.1	EMBL	gene	4243342	4244830	.	-	.	ID=gene3838;Name=16S rRNA;gbkey=Gene;gene=16S rRNA;gene_biotype=rRNA
AM286415.1	EMBL	rRNA	4243342	4244830	.	-	.	ID=rna141;Parent=gene3838;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	exon	4243342	4244830	.	-	.	ID=id6759;Parent=rna141;Note=match to 16S_rRNA 1..1461 (Y.enterocolitica 16S);gbkey=rRNA;gene=16S rRNA;product=16S ribosomal RNA
AM286415.1	EMBL	gene	4245402	4245944	.	+	.	ID=gene3839;Name=YE3883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3883
AM286415.1	EMBL	CDS	4245402	4245944	.	+	0	ID=cds3732;Parent=gene3839;Dbxref=EnsemblGenomes-Gn:YE3883,EnsemblGenomes-Tr:CAL13902,GOA:A1JRY2,InterPro:IPR001451,InterPro:IPR011004,UniProtKB/TrEMBL:A1JRY2,NCBI_GP:CAL13902.1;Name=CAL13902.1;gbkey=CDS;product=putative transferase;protein_id=CAL13902.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4245489	4245542	.	+	.	ID=id6760;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 11.7%2CE-value 1.1;gbkey=misc_feature;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	4245552	4245605	.	+	.	ID=id6761;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 4.7%2CE-value 12;gbkey=misc_feature;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	4245690	4245743	.	+	.	ID=id6762;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 13.5%2CE-value 0.34;gbkey=misc_feature;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	4245744	4245797	.	+	.	ID=id6763;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 11.4%2CE-value 1.4;gbkey=misc_feature;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	gene	4246004	4246825	.	-	.	ID=gene3840;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=YE3884
AM286415.1	EMBL	CDS	4246004	4246825	.	-	0	ID=cds3733;Parent=gene3840;Dbxref=EnsemblGenomes-Gn:YE3884,EnsemblGenomes-Tr:CAL13903,GOA:A1JRY4,InterPro:IPR006151,InterPro:IPR011342,InterPro:IPR013708,InterPro:IPR016040,InterPro:IPR022893,NCBI_GP:CAL13903.1;Name=CAL13903.1;gbkey=CDS;gene=aroE;product=shikimate 5-dehydrogenase;protein_id=CAL13903.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4246058	4246768	.	-	.	ID=id6764;Note=Pfam match to entry PF01488 Shikimate_DH%2C Shikimate / quinate 5-dehydrogenase%2C score 290.3%2C E-value 1.6e-84;gbkey=misc_feature;gene=aroE;inference=protein motif:PFAM:PF01488
AM286415.1	EMBL	sequence_feature	4246394	4246426	.	-	.	ID=id6765;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=aroE;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4246834	4247406	.	-	.	ID=gene3841;Name=YE3885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3885
AM286415.1	EMBL	CDS	4246834	4247406	.	-	0	ID=cds3734;Parent=gene3841;Dbxref=EnsemblGenomes-Gn:YE3885,EnsemblGenomes-Tr:CAL13904,GOA:A1JRY6,InterPro:IPR006070,InterPro:IPR017945,InterPro:IPR023535,NCBI_GP:CAL13904.1;Name=CAL13904.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13904.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4246837	4247364	.	-	.	ID=id6766;Note=Pfam match to entry PF01300 Sua5_yciO_yrdC%2C yrdC domain%2C score 228.9%2C E-value 4.7e-66;gbkey=misc_feature;inference=protein motif:PFAM:PF01300
AM286415.1	EMBL	sequence_feature	4247305	4247343	.	-	.	ID=id6767;Note=PS01147 SUA5/yciO/yrdC family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01147
AM286415.1	EMBL	gene	4247414	4247950	.	-	.	ID=gene3842;Name=YE3886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3886
AM286415.1	EMBL	CDS	4247414	4247950	.	-	0	ID=cds3735;Parent=gene3842;Dbxref=EnsemblGenomes-Gn:YE3886,EnsemblGenomes-Tr:CAL13905,GOA:A1JRY7,InterPro:IPR000380,InterPro:IPR013498,UniProtKB/TrEMBL:A1JRY7,NCBI_GP:CAL13905.1;Name=CAL13905.1;gbkey=CDS;product=putative DNA-binding protein;protein_id=CAL13905.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4247528	4247650	.	-	.	ID=id6768;Note=Pfam match to entry PF01396 zf-C4_Topoisom%2CTopoisomerase DNA binding C4 zinc finger%2C score 60.1%2CE-value 3.1e-15;gbkey=misc_feature;inference=protein motif:PFAM:PF01396
AM286415.1	EMBL	sequence_feature	4247660	4247776	.	-	.	ID=id6769;Note=Pfam match to entry PF01396 zf-C4_Topoisom%2CTopoisomerase DNA binding C4 zinc finger%2C score 73.1%2CE-value 3.8e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF01396
AM286415.1	EMBL	sequence_feature	4247807	4247923	.	-	.	ID=id6770;Note=Pfam match to entry PF01396 zf-C4_Topoisom%2CTopoisomerase DNA binding C4 zinc finger%2C score 62.7%2CE-value 5e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF01396
AM286415.1	EMBL	gene	4247992	4248429	.	-	.	ID=gene3843;Name=YE3887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3887
AM286415.1	EMBL	CDS	4247992	4248429	.	-	0	ID=cds3736;Parent=gene3843;Dbxref=EnsemblGenomes-Gn:YE3887,EnsemblGenomes-Tr:CAL13906,InterPro:IPR007456,UniProtKB/TrEMBL:A1JRY9,NCBI_GP:CAL13906.1;Name=CAL13906.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13906.1;transl_table=11
AM286415.1	EMBL	gene	4248437	4249558	.	-	.	ID=gene3844;Name=YE3888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3888
AM286415.1	EMBL	CDS	4248437	4249558	.	-	0	ID=cds3737;Parent=gene3844;Dbxref=EnsemblGenomes-Gn:YE3888,EnsemblGenomes-Tr:CAL13907,GOA:A1JRZ0,InterPro:IPR003488,UniProtKB/TrEMBL:A1JRZ0,NCBI_GP:CAL13907.1;Name=CAL13907.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13907.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4248737	4249363	.	-	.	ID=id6771;Note=Pfam match to entry PF02481 SMF%2C SMF family%2C score 347.1%2C E-value 1.3e-101;gbkey=misc_feature;inference=protein motif:PFAM:PF02481
AM286415.1	EMBL	sequence_feature	4249070	4249093	.	-	.	ID=id6772;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4249692	4250204	.	+	.	ID=gene3845;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;gene_synonym=fms;locus_tag=YE3889
AM286415.1	EMBL	CDS	4249692	4250204	.	+	0	ID=cds3738;Parent=gene3845;Dbxref=EnsemblGenomes-Gn:YE3889,EnsemblGenomes-Tr:CAL13908,GOA:A1JRZ1,InterPro:IPR000181,InterPro:IPR023635,NCBI_GP:CAL13908.1;Name=CAL13908.1;gbkey=CDS;gene=def;product=polypeptide deformylase;protein_id=CAL13908.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4249695	4250162	.	+	.	ID=id6773;Note=Pfam match to entry PF01327 Pep_deformylase%2CPolypeptide deformylase%2C score 294.7%2C E-value 7.4e-86;gbkey=misc_feature;gene=def;inference=protein motif:PFAM:PF01327
AM286415.1	EMBL	gene	4250229	4251176	.	+	.	ID=gene3846;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=YE3890
AM286415.1	EMBL	CDS	4250229	4251176	.	+	0	ID=cds3739;Parent=gene3846;Dbxref=EnsemblGenomes-Gn:YE3890,EnsemblGenomes-Tr:CAL13909,GOA:A1JRZ2,InterPro:IPR001555,InterPro:IPR002376,InterPro:IPR005793,InterPro:IPR005794,InterPro:IPR011034,InterPro:IPR015518,NCBI_GP:CAL13909.1;Name=CAL13909.1;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=CAL13909.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4250235	4250780	.	+	.	ID=id6774;Note=Pfam match to entry PF00551 formyl_transf%2C Formyl transferase%2C score 251.1%2C E-value 1e-72;gbkey=misc_feature;gene=fmt;inference=protein motif:PFAM:PF00551
AM286415.1	EMBL	sequence_feature	4250634	4250705	.	+	.	ID=id6775;Note=PS00373 Phosphoribosylglycinamide formyltransferase active site.;gbkey=misc_feature;gene=fmt;inference=protein motif:Prosite:PS00373
AM286415.1	EMBL	sequence_feature	4250850	4251143	.	+	.	ID=id6776;Note=Pfam match to entry PF02911 formyl_trans_C%2C Formyl transferase%2C C-terminal domain%2C score 157.9%2C E-value 1.1e-44;gbkey=misc_feature;gene=fmt;inference=protein motif:PFAM:PF02911
AM286415.1	EMBL	gene	4251468	4252757	.	+	.	ID=gene3847;Name=YE3891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3891
AM286415.1	EMBL	CDS	4251468	4252757	.	+	0	ID=cds3740;Parent=gene3847;Dbxref=EnsemblGenomes-Gn:YE3891,EnsemblGenomes-Tr:CAL13910,GOA:A1JRZ3,InterPro:IPR001678,InterPro:IPR004573,InterPro:IPR006027,InterPro:IPR018314,InterPro:IPR023267,InterPro:IPR023541,InterPro:IPR029063,NCBI_GP:CAL13910.1;Name=CAL13910.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13910.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4251480	4251854	.	+	.	ID=id6777;Note=Pfam match to entry PF01029 NusB%2C NusB family %2Cscore 143.1%2C E-value 3.3e-40;gbkey=misc_feature;inference=protein motif:PFAM:PF01029
AM286415.1	EMBL	sequence_feature	4251957	4252748	.	+	.	ID=id6778;Note=Pfam match to entry PF01189 Nol1_Nop2_Sun%2CNOL1/NOP2/sun family%2C score 411.5%2C E-value 5.2e-121;gbkey=misc_feature;inference=protein motif:PFAM:PF01189
AM286415.1	EMBL	sequence_feature	4252413	4252448	.	+	.	ID=id6779;Note=PS01153 NOL1/NOP2/sun family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01153
AM286415.1	EMBL	gene	4252809	4254185	.	+	.	ID=gene3848;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=YE3892
AM286415.1	EMBL	CDS	4252809	4254185	.	+	0	ID=cds3741;Parent=gene3848;Dbxref=EnsemblGenomes-Gn:YE3892,EnsemblGenomes-Tr:CAL13911,GOA:A1JRZ4,InterPro:IPR003148,InterPro:IPR006036,InterPro:IPR006037,InterPro:IPR016040,UniProtKB/TrEMBL:A1JRZ4,NCBI_GP:CAL13911.1;Name=CAL13911.1;gbkey=CDS;gene=trkA;product=trk system potassium uptake protein;protein_id=CAL13911.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4252812	4253183	.	+	.	ID=id6780;Note=Pfam match to entry PF02254 TrkA-N%2C TrkA-N domain %2Cscore 76.6%2C E-value 3.3e-20;gbkey=misc_feature;gene=trkA;inference=protein motif:PFAM:PF02254
AM286415.1	EMBL	sequence_feature	4253226	4253495	.	+	.	ID=id6781;Note=Pfam match to entry PF02080 TrkA-C%2C TrkA-C domain %2Cscore 83.6%2C E-value 2.6e-22;gbkey=misc_feature;gene=trkA;inference=protein motif:PFAM:PF02080
AM286415.1	EMBL	sequence_feature	4253508	4253858	.	+	.	ID=id6782;Note=Pfam match to entry PF02254 TrkA-N%2C TrkA-N domain %2Cscore 55.5%2C E-value 7.6e-14;gbkey=misc_feature;gene=trkA;inference=protein motif:PFAM:PF02254
AM286415.1	EMBL	sequence_feature	4253910	4254173	.	+	.	ID=id6783;Note=Pfam match to entry PF02080 TrkA-C%2C TrkA-C domain %2Cscore 60.9%2C E-value 1.8e-15;gbkey=misc_feature;gene=trkA;inference=protein motif:PFAM:PF02080
AM286415.1	EMBL	gene	4254305	4254715	.	+	.	ID=gene3849;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=YE3893
AM286415.1	EMBL	CDS	4254305	4254715	.	+	0	ID=cds3742;Parent=gene3849;Dbxref=EnsemblGenomes-Gn:YE3893,EnsemblGenomes-Tr:CAL13912,GOA:A1JRZ6,InterPro:IPR001185,InterPro:IPR019823,NCBI_GP:CAL13912.1;Name=CAL13912.1;gbkey=CDS;gene=mscL;product=mechanosensitive ion channel;protein_id=CAL13912.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4254311	4254703	.	+	.	ID=id6784;Note=Pfam match to entry PF01741 MscL%2C Large-conductance mechanosensitive channel%2C MscL%2C score 274.5%2C E-value 8.8e-80;gbkey=misc_feature;gene=mscL;inference=protein motif:PFAM:PF01741
AM286415.1	EMBL	sequence_feature	4254341	4254382	.	+	.	ID=id6785;Note=PS01327 Large-conductance mechanosensitive channels mscL family signature.;gbkey=misc_feature;gene=mscL;inference=protein motif:Prosite:PS01327
AM286415.1	EMBL	sequence_feature	4254362	4254430	.	+	.	ID=id6786;Note=2 probable transmembrane helices predicted for YE3893 by TMHMM2.0 at aa 20-42 and 77-96;gbkey=misc_feature;gene=mscL;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4254533	4254592	.	+	.	ID=id6786;Note=2 probable transmembrane helices predicted for YE3893 by TMHMM2.0 at aa 20-42 and 77-96;gbkey=misc_feature;gene=mscL;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	4254769	4254975	.	-	.	ID=gene3850;Name=YE3894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3894
AM286415.1	EMBL	CDS	4254769	4254975	.	-	0	ID=cds3743;Parent=gene3850;Dbxref=EnsemblGenomes-Gn:YE3894,EnsemblGenomes-Tr:CAL13913,InterPro:IPR005589,UniProtKB/TrEMBL:A1JRZ7,NCBI_GP:CAL13913.1;Name=CAL13913.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13913.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4254811	4254960	.	-	.	ID=id6787;Note=Pfam match to entry PF03889 DUF331%2C Domain of unknown function%2C score 93.8%2C E-value 2.2e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF03889
AM286415.1	EMBL	gene	4255065	4255490	.	-	.	ID=gene3851;Name=YE3895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3895
AM286415.1	EMBL	CDS	4255065	4255490	.	-	0	ID=cds3744;Parent=gene3851;Dbxref=EnsemblGenomes-Gn:YE3895,EnsemblGenomes-Tr:CAL13914,GOA:A1JRZ8,InterPro:IPR000551,InterPro:IPR009061,InterPro:IPR011788,UniProtKB/TrEMBL:A1JRZ8,NCBI_GP:CAL13914.1;Name=CAL13914.1;gbkey=CDS;product=MerR-family transcriptional regulator;protein_id=CAL13914.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4255371	4255478	.	-	.	ID=id6788;Note=Pfam match to entry PF00376 merR%2C Bacterial regulatory proteins%2C merR family%2C score 67.9%2C E-value 1.4e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00376
AM286415.1	EMBL	sequence_feature	4255410	4255478	.	-	.	ID=id6789;Note=PS00552 Bacterial regulatory proteins%2C merR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00552
AM286415.1	EMBL	gene	4255494	4255865	.	-	.	ID=gene3852;Name=YE3896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3896
AM286415.1	EMBL	CDS	4255494	4255865	.	-	0	ID=cds3745;Parent=gene3852;Dbxref=EnsemblGenomes-Gn:YE3896,EnsemblGenomes-Tr:CAL13915,InterPro:IPR018961,UniProtKB/TrEMBL:A1JRZ9,NCBI_GP:CAL13915.1;Name=CAL13915.1;Note=Similar to Salmonella typhi hypothetical protein YhdN or sty4385 SWALL:Q8Z1X3 (EMBL:AL627282) (122 aa) fasta scores: E(): 5.2e-25%2C 57.5 38d in 120 aa%2C and to Escherichia coli hypothetical protein YhdN or b3293 SWALL:YHDN_ECOLI (SWALL:P36677) (122 aa) fasta scores: E(): 1.3e-23%2C 57.37 38d in 122 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P36677;product=Conserved hypothetical protein;protein_id=CAL13915.1;transl_table=11
AM286415.1	EMBL	gene	4256035	4256424	.	-	.	ID=gene3853;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=YE3897
AM286415.1	EMBL	CDS	4256035	4256424	.	-	0	ID=cds3746;Parent=gene3853;Dbxref=EnsemblGenomes-Gn:YE3897,EnsemblGenomes-Tr:CAL13916,GOA:A1JS00,InterPro:IPR000456,NCBI_GP:CAL13916.1;Name=CAL13916.1;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=CAL13916.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4256077	4256367	.	-	.	ID=id6790;Note=Pfam match to entry PF01196 Ribosomal_L17%2CRibosomal protein L17%2C score 233.0%2C E-value 2.9e-67;gbkey=misc_feature;gene=rplQ;inference=protein motif:PFAM:PF01196
AM286415.1	EMBL	sequence_feature	4256257	4256325	.	-	.	ID=id6791;Note=PS01167 Ribosomal protein L17 signature.;gbkey=misc_feature;gene=rplQ;inference=protein motif:Prosite:PS01167
AM286415.1	EMBL	gene	4256465	4257457	.	-	.	ID=gene3854;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=YE3898
AM286415.1	EMBL	CDS	4256465	4257457	.	-	0	ID=cds3747;Parent=gene3854;Dbxref=EnsemblGenomes-Gn:YE3898,EnsemblGenomes-Tr:CAL13917,GOA:A1JS01,InterPro:IPR009025,InterPro:IPR011260,InterPro:IPR011262,InterPro:IPR011263,InterPro:IPR011773,NCBI_GP:CAL13917.1;Name=CAL13917.1;gbkey=CDS;gene=rpoA;product=DNA-directed RNA polymerase alpha chain;protein_id=CAL13917.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4256531	4256734	.	-	.	ID=id6792;Note=Pfam match to entry PF03118 RNA_pol_A_CTD%2CBacterial RNA polymerase%2C alpha chain C terminal domain %2Cscore 128.3%2C E-value 8.9e-36;gbkey=misc_feature;gene=rpoA;inference=protein motif:PFAM:PF03118
AM286415.1	EMBL	sequence_feature	4256774	4257391	.	-	.	ID=id6793;Note=Pfam match to entry PF01000 RNA_pol_A_bac%2CBacterial RNA polymerase%2C alpha chain%2C N terminal domain %2Cscore 365.3%2C E-value 4.2e-107;gbkey=misc_feature;gene=rpoA;inference=protein motif:PFAM:PF01000
AM286415.1	EMBL	gene	4257483	4258103	.	-	.	ID=gene3855;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;gene_synonym=ramA;locus_tag=YE3899
AM286415.1	EMBL	CDS	4257483	4258103	.	-	0	ID=cds3748;Parent=gene3855;Dbxref=EnsemblGenomes-Gn:YE3899,EnsemblGenomes-Tr:CAL13918,GOA:A1JS02,InterPro:IPR001912,InterPro:IPR002942,InterPro:IPR005709,InterPro:IPR018079,InterPro:IPR022801,NCBI_GP:CAL13918.1;Name=CAL13918.1;gbkey=CDS;gene=rpsD;product=30S ribosomal protein S4;protein_id=CAL13918.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4257675	4257818	.	-	.	ID=id6794;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 77.7%2C E-value 1.5e-20;gbkey=misc_feature;gene=rpsD;inference=protein motif:PFAM:PF01479
AM286415.1	EMBL	sequence_feature	4257750	4257824	.	-	.	ID=id6795;Note=PS00632 Ribosomal protein S4 signature.;gbkey=misc_feature;gene=rpsD;inference=protein motif:Prosite:PS00632
AM286415.1	EMBL	sequence_feature	4257819	4258103	.	-	.	ID=id6796;Note=Pfam match to entry PF00163 Ribosomal_S4%2C Ribosomal protein S4/S9 N-terminal domain%2C score 136.0%2C E-value 4.3e-38;gbkey=misc_feature;gene=rpsD;inference=protein motif:PFAM:PF00163
AM286415.1	EMBL	gene	4258134	4258523	.	-	.	ID=gene3856;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=YE3900
AM286415.1	EMBL	CDS	4258134	4258523	.	-	0	ID=cds3749;Parent=gene3856;Dbxref=EnsemblGenomes-Gn:YE3900,EnsemblGenomes-Tr:CAL13919,GOA:A1JS03,InterPro:IPR001971,InterPro:IPR018102,InterPro:IPR019981,NCBI_GP:CAL13919.1;Name=CAL13919.1;gbkey=CDS;gene=rpsK;product=30S ribosomal protein S11;protein_id=CAL13919.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4258140	4258469	.	-	.	ID=id6797;Note=Pfam match to entry PF00411 Ribosomal_S11%2CRibosomal protein S11%2C score 263.3%2C E-value 2.2e-76;gbkey=misc_feature;gene=rpsK;inference=protein motif:PFAM:PF00411
AM286415.1	EMBL	sequence_feature	4258167	4258235	.	-	.	ID=id6798;Note=PS00054 Ribosomal protein S11 signature.;gbkey=misc_feature;gene=rpsK;inference=protein motif:Prosite:PS00054
AM286415.1	EMBL	gene	4258540	4258896	.	-	.	ID=gene3857;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=YE3901
AM286415.1	EMBL	CDS	4258540	4258896	.	-	0	ID=cds3750;Parent=gene3857;Dbxref=EnsemblGenomes-Gn:YE3901,EnsemblGenomes-Tr:CAL13920,GOA:A1JS04,InterPro:IPR001892,InterPro:IPR010979,InterPro:IPR018269,InterPro:IPR019980,InterPro:IPR027437,NCBI_GP:CAL13920.1;Name=CAL13920.1;gbkey=CDS;gene=rpsM;product=30S ribosomal protein S13;protein_id=CAL13920.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4258573	4258890	.	-	.	ID=id6799;Note=Pfam match to entry PF00416 Ribosomal_S13%2CRibosomal protein S13/S18%2C score 207.9%2C E-value 1e-59;gbkey=misc_feature;gene=rpsM;inference=protein motif:PFAM:PF00416
AM286415.1	EMBL	sequence_feature	4258597	4258638	.	-	.	ID=id6800;Note=PS00646 Ribosomal protein S13 signature.;gbkey=misc_feature;gene=rpsM;inference=protein motif:Prosite:PS00646
AM286415.1	EMBL	sequence_feature	4258783	4258869	.	-	.	ID=id6801;Note=PS00061 Short-chain dehydrogenases/reductases family signature.;gbkey=misc_feature;gene=rpsM;inference=protein motif:Prosite:PS00061
AM286415.1	EMBL	sequence_feature	4258813	4258836	.	-	.	ID=id6802;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=rpsM;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	transcript	4258864	4258975	.	-	.	ID=rna142;Note=Alpha operon ribosome binding site (RF00140) as predicted by Rfam%2C score 97.13%2C positions 1 to 112;gbkey=misc_RNA
AM286415.1	EMBL	exon	4258864	4258975	.	-	.	ID=id6803;Parent=rna142;Note=Alpha operon ribosome binding site (RF00140) as predicted by Rfam%2C score 97.13%2C positions 1 to 112;gbkey=misc_RNA
AM286415.1	EMBL	gene	4259044	4259160	.	-	.	ID=gene3858;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=YE3902
AM286415.1	EMBL	CDS	4259044	4259160	.	-	0	ID=cds3751;Parent=gene3858;Dbxref=EnsemblGenomes-Gn:YE3902,EnsemblGenomes-Tr:CAL13921,GOA:A1JS06,InterPro:IPR000473,NCBI_GP:CAL13921.1;Name=CAL13921.1;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=CAL13921.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4259047	4259160	.	-	.	ID=id6804;Note=Pfam match to entry PF00444 Ribosomal_L36%2CRibosomal protein L36%2C score 62.9%2C E-value 4.3e-16;gbkey=misc_feature;gene=rpmJ;inference=protein motif:PFAM:PF00444
AM286415.1	EMBL	sequence_feature	4259050	4259130	.	-	.	ID=id6805;Note=PS00828 Ribosomal protein L36 signature.;gbkey=misc_feature;gene=rpmJ;inference=protein motif:Prosite:PS00828
AM286415.1	EMBL	gene	4259195	4260526	.	-	.	ID=gene3859;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;gene_synonym=prlA;locus_tag=YE3903
AM286415.1	EMBL	CDS	4259195	4260526	.	-	0	ID=cds3752;Parent=gene3859;Dbxref=EnsemblGenomes-Gn:YE3903,EnsemblGenomes-Tr:CAL13922,GOA:A1JS07,InterPro:IPR002208,InterPro:IPR023201,InterPro:IPR026593,UniProtKB/TrEMBL:A1JS07,NCBI_GP:CAL13922.1;Name=CAL13922.1;gbkey=CDS;gene=secY;product=preprotein translocase SecY subunit;protein_id=CAL13922.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4260395	4260463	.	-	.	ID=id6806;Note=10 probable transmembrane helices predicted for YE3903 by TMHMM2.0 at aa 22-44%2C 76-98%2C 119-138%2C 153-175%2C182-204%2C 215-237%2C 274-296%2C 316-338%2C 369-391 and 401-423;gbkey=misc_feature;gene=secY;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4260233	4260301	.	-	.	ID=id6806;Note=10 probable transmembrane helices predicted for YE3903 by TMHMM2.0 at aa 22-44%2C 76-98%2C 119-138%2C 153-175%2C182-204%2C 215-237%2C 274-296%2C 316-338%2C 369-391 and 401-423;gbkey=misc_feature;gene=secY;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4260113	4260172	.	-	.	ID=id6806;Note=10 probable transmembrane helices predicted for YE3903 by TMHMM2.0 at aa 22-44%2C 76-98%2C 119-138%2C 153-175%2C182-204%2C 215-237%2C 274-296%2C 316-338%2C 369-391 and 401-423;gbkey=misc_feature;gene=secY;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4260002	4260070	.	-	.	ID=id6806;Note=10 probable transmembrane helices predicted for YE3903 by TMHMM2.0 at aa 22-44%2C 76-98%2C 119-138%2C 153-175%2C182-204%2C 215-237%2C 274-296%2C 316-338%2C 369-391 and 401-423;gbkey=misc_feature;gene=secY;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4259915	4259983	.	-	.	ID=id6806;Note=10 probable transmembrane helices predicted for YE3903 by TMHMM2.0 at aa 22-44%2C 76-98%2C 119-138%2C 153-175%2C182-204%2C 215-237%2C 274-296%2C 316-338%2C 369-391 and 401-423;gbkey=misc_feature;gene=secY;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4259816	4259884	.	-	.	ID=id6806;Note=10 probable transmembrane helices predicted for YE3903 by TMHMM2.0 at aa 22-44%2C 76-98%2C 119-138%2C 153-175%2C182-204%2C 215-237%2C 274-296%2C 316-338%2C 369-391 and 401-423;gbkey=misc_feature;gene=secY;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4259639	4259707	.	-	.	ID=id6806;Note=10 probable transmembrane helices predicted for YE3903 by TMHMM2.0 at aa 22-44%2C 76-98%2C 119-138%2C 153-175%2C182-204%2C 215-237%2C 274-296%2C 316-338%2C 369-391 and 401-423;gbkey=misc_feature;gene=secY;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4259513	4259581	.	-	.	ID=id6806;Note=10 probable transmembrane helices predicted for YE3903 by TMHMM2.0 at aa 22-44%2C 76-98%2C 119-138%2C 153-175%2C182-204%2C 215-237%2C 274-296%2C 316-338%2C 369-391 and 401-423;gbkey=misc_feature;gene=secY;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4259354	4259422	.	-	.	ID=id6806;Note=10 probable transmembrane helices predicted for YE3903 by TMHMM2.0 at aa 22-44%2C 76-98%2C 119-138%2C 153-175%2C182-204%2C 215-237%2C 274-296%2C 316-338%2C 369-391 and 401-423;gbkey=misc_feature;gene=secY;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4259258	4259326	.	-	.	ID=id6806;Note=10 probable transmembrane helices predicted for YE3903 by TMHMM2.0 at aa 22-44%2C 76-98%2C 119-138%2C 153-175%2C182-204%2C 215-237%2C 274-296%2C 316-338%2C 369-391 and 401-423;gbkey=misc_feature;gene=secY;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	4259270	4260301	.	-	.	ID=id6807;Note=Pfam match to entry PF00344 secY%2C eubacterial secY protein%2C score 687.4%2C E-value 4.6e-204;gbkey=misc_feature;gene=secY;inference=protein motif:PFAM:PF00344
AM286415.1	EMBL	sequence_feature	4259930	4259986	.	-	.	ID=id6808;Note=PS00095 C-5 cytosine-specific DNA methylases C-terminal signature.;gbkey=misc_feature;gene=secY;inference=protein motif:Prosite:PS00095
AM286415.1	EMBL	sequence_feature	4259954	4260010	.	-	.	ID=id6809;Note=PS00756 Protein secY signature 2.;gbkey=misc_feature;gene=secY;inference=protein motif:Prosite:PS00756
AM286415.1	EMBL	sequence_feature	4260242	4260301	.	-	.	ID=id6810;Note=PS00755 Protein secY signature 1.;gbkey=misc_feature;gene=secY;inference=protein motif:Prosite:PS00755
AM286415.1	EMBL	gene	4260534	4260968	.	-	.	ID=gene3860;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=YE3904
AM286415.1	EMBL	CDS	4260534	4260968	.	-	0	ID=cds3753;Parent=gene3860;Dbxref=EnsemblGenomes-Gn:YE3904,EnsemblGenomes-Tr:CAL13923,GOA:A1JS08,InterPro:IPR001196,InterPro:IPR005749,InterPro:IPR021131,NCBI_GP:CAL13923.1;Name=CAL13923.1;gbkey=CDS;gene=rplO;product=50S ribosomal protein L15;protein_id=CAL13923.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4260549	4260644	.	-	.	ID=id6811;Note=Pfam match to entry PF00256 L15%2C Ribosomal protein L15%2C score 46.6%2C E-value 3.5e-11;gbkey=misc_feature;gene=rplO;inference=protein motif:PFAM:PF00256
AM286415.1	EMBL	sequence_feature	4260552	4260644	.	-	.	ID=id6812;Note=PS00475 Ribosomal protein L15 signature.;gbkey=misc_feature;gene=rplO;inference=protein motif:Prosite:PS00475
AM286415.1	EMBL	sequence_feature	4260666	4260968	.	-	.	ID=id6813;Note=Pfam match to entry PF01305 Ribosomal_L15%2CRibosomal protein L15 amino terminal region%2C score 219.3%2CE-value 3.6e-63;gbkey=misc_feature;gene=rplO;inference=protein motif:PFAM:PF01305
AM286415.1	EMBL	gene	4260972	4261151	.	-	.	ID=gene3861;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=YE3905
AM286415.1	EMBL	CDS	4260972	4261151	.	-	0	ID=cds3754;Parent=gene3861;Dbxref=EnsemblGenomes-Gn:YE3905,EnsemblGenomes-Tr:CAL13924,GOA:A1JS10,InterPro:IPR005996,InterPro:IPR016082,InterPro:IPR018038,NCBI_GP:CAL13924.1;Name=CAL13924.1;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=CAL13924.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4260987	4261145	.	-	.	ID=id6814;Note=Pfam match to entry PF00327 Ribosomal_L30%2CRibosomal protein L30p/L7e%2C score 92.5%2C E-value 5.6e-25;gbkey=misc_feature;gene=rpmD;inference=protein motif:PFAM:PF00327
AM286415.1	EMBL	sequence_feature	4260987	4261085	.	-	.	ID=id6815;Note=PS00634 Ribosomal protein L30 signature.;gbkey=misc_feature;gene=rpmD;inference=protein motif:Prosite:PS00634
AM286415.1	EMBL	gene	4261154	4261657	.	-	.	ID=gene3862;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=YE3906
AM286415.1	EMBL	CDS	4261154	4261657	.	-	0	ID=cds3755;Parent=gene3862;Dbxref=EnsemblGenomes-Gn:YE3906,EnsemblGenomes-Tr:CAL13925,GOA:A1JS11,InterPro:IPR000851,InterPro:IPR005324,InterPro:IPR005712,InterPro:IPR013810,InterPro:IPR014720,InterPro:IPR014721,InterPro:IPR018192,InterPro:IPR020568,NCBI_GP:CAL13925.1;Name=CAL13925.1;gbkey=CDS;gene=rpsE;product=30S ribosomal protein S5;protein_id=CAL13925.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4261184	4261405	.	-	.	ID=id6816;Note=Pfam match to entry PF03719 Ribosomal_S5_C%2CRibosomal protein S5%2C C-terminal domain%2C score 145.2%2CE-value 7.7e-41;gbkey=misc_feature;gene=rpsE;inference=protein motif:PFAM:PF03719
AM286415.1	EMBL	sequence_feature	4261430	4261630	.	-	.	ID=id6817;Note=Pfam match to entry PF00333 Ribosomal_S5%2C Ribosomal protein S5%2C N-terminal domain%2C score 141.3%2C E-value 1.1e-39;gbkey=misc_feature;gene=rpsE;inference=protein motif:PFAM:PF00333
AM286415.1	EMBL	sequence_feature	4261478	4261576	.	-	.	ID=id6818;Note=PS00585 Ribosomal protein S5 signature.;gbkey=misc_feature;gene=rpsE;inference=protein motif:Prosite:PS00585
AM286415.1	EMBL	gene	4261672	4262025	.	-	.	ID=gene3863;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=YE3907
AM286415.1	EMBL	CDS	4261672	4262025	.	-	0	ID=cds3756;Parent=gene3863;Dbxref=EnsemblGenomes-Gn:YE3907,EnsemblGenomes-Tr:CAL13926,GOA:A1JS13,InterPro:IPR004389,InterPro:IPR005484,NCBI_GP:CAL13926.1;Name=CAL13926.1;gbkey=CDS;gene=rplR;product=50S ribosomal protein L18;protein_id=CAL13926.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4261675	4262025	.	-	.	ID=id6819;Note=Pfam match to entry PF00861 Ribosomal_L18p%2CRibosomal L18p/L5e family%2C score 182.4%2C E-value 4.6e-52;gbkey=misc_feature;gene=rplR;inference=protein motif:PFAM:PF00861
AM286415.1	EMBL	gene	4262035	4262568	.	-	.	ID=gene3864;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=YE3908
AM286415.1	EMBL	CDS	4262035	4262568	.	-	0	ID=cds3757;Parent=gene3864;Dbxref=EnsemblGenomes-Gn:YE3908,EnsemblGenomes-Tr:CAL13927,GOA:A1JS15,InterPro:IPR000702,InterPro:IPR002358,InterPro:IPR019906,InterPro:IPR020040,NCBI_GP:CAL13927.1;Name=CAL13927.1;gbkey=CDS;gene=rplF;product=50S ribosomal protein L6;protein_id=CAL13927.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4262074	4262301	.	-	.	ID=id6820;Note=Pfam match to entry PF00347 Ribosomal_L6%2C Ribosomal protein L6%2C score 109.6%2C E-value 3.8e-30;gbkey=misc_feature;gene=rplF;inference=protein motif:PFAM:PF00347
AM286415.1	EMBL	sequence_feature	4262083	4262109	.	-	.	ID=id6821;Note=PS00525 Ribosomal protein L6 signature 1.;gbkey=misc_feature;gene=rplF;inference=protein motif:Prosite:PS00525
AM286415.1	EMBL	sequence_feature	4262323	4262538	.	-	.	ID=id6822;Note=Pfam match to entry PF00347 Ribosomal_L6%2C Ribosomal protein L6%2C score 87.7%2C E-value 1.5e-23;gbkey=misc_feature;gene=rplF;inference=protein motif:PFAM:PF00347
AM286415.1	EMBL	gene	4262583	4262975	.	-	.	ID=gene3865;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=YE3909
AM286415.1	EMBL	CDS	4262583	4262975	.	-	0	ID=cds3758;Parent=gene3865;Dbxref=EnsemblGenomes-Gn:YE3909,EnsemblGenomes-Tr:CAL13928,GOA:A1JS16,InterPro:IPR000630,NCBI_GP:CAL13928.1;Name=CAL13928.1;gbkey=CDS;gene=rpsH;product=30S ribosomal protein S8;protein_id=CAL13928.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4262586	4262963	.	-	.	ID=id6823;Note=Pfam match to entry PF00410 Ribosomal_S8%2C Ribosomal protein S8%2C score 252.0%2C E-value 5.2e-73;gbkey=misc_feature;gene=rpsH;inference=protein motif:PFAM:PF00410
AM286415.1	EMBL	sequence_feature	4262586	4262597	.	-	.	ID=id6824;Note=PS00294 Prenyl group binding site (CAAX box).;gbkey=misc_feature;gene=rpsH;inference=protein motif:Prosite:PS00294
AM286415.1	EMBL	sequence_feature	4262625	4262678	.	-	.	ID=id6825;Note=PS00053 Ribosomal protein S8 signature.;gbkey=misc_feature;gene=rpsH;inference=protein motif:Prosite:PS00053
AM286415.1	EMBL	gene	4263009	4263314	.	-	.	ID=gene3866;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=YE3910
AM286415.1	EMBL	CDS	4263009	4263314	.	-	0	ID=cds3759;Parent=gene3866;Dbxref=EnsemblGenomes-Gn:YE3910,EnsemblGenomes-Tr:CAL13929,GOA:A1JS18,InterPro:IPR001209,InterPro:IPR018271,InterPro:IPR023036,NCBI_GP:CAL13929.1;Name=CAL13929.1;gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=CAL13929.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4263012	4263314	.	-	.	ID=id6826;Note=Pfam match to entry PF00253 Ribosomal_S14%2CRibosomal protein S14p/S29e%2C score 182.3%2C E-value 5e-52;gbkey=misc_feature;gene=rpsN;inference=protein motif:PFAM:PF00253
AM286415.1	EMBL	sequence_feature	4263060	4263128	.	-	.	ID=id6827;Note=PS00527 Ribosomal protein S14 signature.;gbkey=misc_feature;gene=rpsN;inference=protein motif:Prosite:PS00527
AM286415.1	EMBL	gene	4263328	4263867	.	-	.	ID=gene3867;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=YE3911
AM286415.1	EMBL	CDS	4263328	4263867	.	-	0	ID=cds3760;Parent=gene3867;Dbxref=EnsemblGenomes-Gn:YE3911,EnsemblGenomes-Tr:CAL13930,GOA:A1JS20,InterPro:IPR002132,InterPro:IPR020930,InterPro:IPR022803,NCBI_GP:CAL13930.1;Name=CAL13930.1;gbkey=CDS;gene=rplE;product=50S ribosomal protein L5;protein_id=CAL13930.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4263334	4263618	.	-	.	ID=id6828;Note=Pfam match to entry PF00673 Ribosomal_L5_C%2Cribosomal L5P family C-terminus%2C score 209.0%2C E-value 4.6e-60;gbkey=misc_feature;gene=rplE;inference=protein motif:PFAM:PF00673
AM286415.1	EMBL	sequence_feature	4263628	4263798	.	-	.	ID=id6829;Note=Pfam match to entry PF00281 Ribosomal_L5%2C Ribosomal protein L5%2C score 122.7%2C E-value 4.6e-34;gbkey=misc_feature;gene=rplE;inference=protein motif:PFAM:PF00281
AM286415.1	EMBL	gene	4263882	4264196	.	-	.	ID=gene3868;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=YE3912
AM286415.1	EMBL	CDS	4263882	4264196	.	-	0	ID=cds3761;Parent=gene3868;Dbxref=EnsemblGenomes-Gn:YE3912,EnsemblGenomes-Tr:CAL13931,GOA:A1JS21,InterPro:IPR003256,InterPro:IPR005824,InterPro:IPR005825,InterPro:IPR008991,InterPro:IPR014722,NCBI_GP:CAL13931.1;Name=CAL13931.1;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=CAL13931.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4264086	4264184	.	-	.	ID=id6830;Note=Pfam match to entry PF00467 KOW%2C KOW motif%2C score 33.6%2C E-value 2.9e-07;gbkey=misc_feature;gene=rplX;inference=protein motif:PFAM:PF00467
AM286415.1	EMBL	sequence_feature	4264122	4264175	.	-	.	ID=id6831;Note=PS01108 Ribosomal protein L24 signature.;gbkey=misc_feature;gene=rplX;inference=protein motif:Prosite:PS01108
AM286415.1	EMBL	gene	4264207	4264578	.	-	.	ID=gene3869;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=YE3913
AM286415.1	EMBL	CDS	4264207	4264578	.	-	0	ID=cds3762;Parent=gene3869;Dbxref=EnsemblGenomes-Gn:YE3913,EnsemblGenomes-Tr:CAL13932,GOA:A1JS23,InterPro:IPR000218,InterPro:IPR005745,InterPro:IPR019972,InterPro:IPR023571,NCBI_GP:CAL13932.1;Name=CAL13932.1;gbkey=CDS;gene=rplN;product=50S ribosomal protein L14;protein_id=CAL13932.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4264210	4264578	.	-	.	ID=id6832;Note=Pfam match to entry PF00238 Ribosomal_L14%2CRibosomal protein L14p/L23e%2C score 279.7%2C E-value 2.4e-81;gbkey=misc_feature;gene=rplN;inference=protein motif:PFAM:PF00238
AM286415.1	EMBL	sequence_feature	4264321	4264401	.	-	.	ID=id6833;Note=PS00049 Ribosomal protein L14 signature.;gbkey=misc_feature;gene=rplN;inference=protein motif:Prosite:PS00049
AM286415.1	EMBL	gene	4264744	4264998	.	-	.	ID=gene3870;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;gene_synonym=neaA;locus_tag=YE3914
AM286415.1	EMBL	CDS	4264744	4264998	.	-	0	ID=cds3763;Parent=gene3870;Dbxref=EnsemblGenomes-Gn:YE3914,EnsemblGenomes-Tr:CAL13933,GOA:A1JS24,InterPro:IPR000266,InterPro:IPR012340,InterPro:IPR019979,InterPro:IPR019984,NCBI_GP:CAL13933.1;Name=CAL13933.1;gbkey=CDS;gene=rpsQ;product=30S ribosomal protein S17;protein_id=CAL13933.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4264765	4264971	.	-	.	ID=id6834;Note=Pfam match to entry PF00366 Ribosomal_S17%2CRibosomal protein S17%2C score 147.1%2C E-value 2e-41;gbkey=misc_feature;gene=rpsQ;inference=protein motif:PFAM:PF00366
AM286415.1	EMBL	sequence_feature	4264795	4264833	.	-	.	ID=id6835;Note=PS00056 Ribosomal protein S17 signature.;gbkey=misc_feature;gene=rpsQ;inference=protein motif:Prosite:PS00056
AM286415.1	EMBL	gene	4264998	4265189	.	-	.	ID=gene3871;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=YE3915
AM286415.1	EMBL	CDS	4264998	4265189	.	-	0	ID=cds3764;Parent=gene3871;Dbxref=EnsemblGenomes-Gn:YE3915,EnsemblGenomes-Tr:CAL13934,GOA:A1JS26,InterPro:IPR001854,NCBI_GP:CAL13934.1;Name=CAL13934.1;gbkey=CDS;gene=rpmC;product=50S ribosomal protein L29;protein_id=CAL13934.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4265001	4265183	.	-	.	ID=id6836;Note=Pfam match to entry PF00831 Ribosomal_L29%2CRibosomal L29 protein%2C score 92.7%2C E-value 5e-25;gbkey=misc_feature;gene=rpmC;inference=protein motif:PFAM:PF00831
AM286415.1	EMBL	gene	4265189	4265599	.	-	.	ID=gene3872;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=YE3916
AM286415.1	EMBL	CDS	4265189	4265599	.	-	0	ID=cds3765;Parent=gene3872;Dbxref=EnsemblGenomes-Gn:YE3916,EnsemblGenomes-Tr:CAL13935,GOA:A1JS27,InterPro:IPR000114,InterPro:IPR016180,InterPro:IPR020798,NCBI_GP:CAL13935.1;Name=CAL13935.1;gbkey=CDS;gene=rplP;product=50S ribosomal protein L16;protein_id=CAL13935.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4265207	4265599	.	-	.	ID=id6837;Note=Pfam match to entry PF00252 Ribosomal_L16%2CRibosomal protein L16%2C score 316.5%2C E-value 2.1e-92;gbkey=misc_feature;gene=rplP;inference=protein motif:PFAM:PF00252
AM286415.1	EMBL	sequence_feature	4265324	4265359	.	-	.	ID=id6838;Note=PS00701 Ribosomal protein L16 signature 2.;gbkey=misc_feature;gene=rplP;inference=protein motif:Prosite:PS00701
AM286415.1	EMBL	sequence_feature	4265393	4265428	.	-	.	ID=id6839;Note=PS00586 Ribosomal protein L16 signature 1.;gbkey=misc_feature;gene=rplP;inference=protein motif:Prosite:PS00586
AM286415.1	EMBL	gene	4265612	4266310	.	-	.	ID=gene3873;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=YE3917
AM286415.1	EMBL	CDS	4265612	4266310	.	-	0	ID=cds3766;Parent=gene3873;Dbxref=EnsemblGenomes-Gn:YE3917,EnsemblGenomes-Tr:CAL13936,GOA:A1JS29,InterPro:IPR001351,InterPro:IPR004044,InterPro:IPR004087,InterPro:IPR005704,InterPro:IPR009019,InterPro:IPR015946,InterPro:IPR018280,NCBI_GP:CAL13936.1;Name=CAL13936.1;gbkey=CDS;gene=rpsC;product=30S ribosomal protein S3;protein_id=CAL13936.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4265705	4265956	.	-	.	ID=id6840;Note=Pfam match to entry PF00189 Ribosomal_S3_C%2CRibosomal protein S3%2C C-terminal domain%2C score 191.3%2CE-value 9.8e-55;gbkey=misc_feature;gene=rpsC;inference=protein motif:PFAM:PF00189
AM286415.1	EMBL	sequence_feature	4265720	4265824	.	-	.	ID=id6841;Note=PS00548 Ribosomal protein S3 signature.;gbkey=misc_feature;gene=rpsC;inference=protein motif:Prosite:PS00548
AM286415.1	EMBL	sequence_feature	4265975	4266118	.	-	.	ID=id6842;Note=Pfam match to entry PF00013 KH%2C KH domain%2C score 35.9%2C E-value 5.9e-08;gbkey=misc_feature;gene=rpsC;inference=protein motif:PFAM:PF00013
AM286415.1	EMBL	sequence_feature	4266125	4266310	.	-	.	ID=id6843;Note=Pfam match to entry PF00417 Ribosomal_S3_N%2CRibosomal protein S3%2C N-terminal domain%2C score 104.9%2CE-value 9.8e-29;gbkey=misc_feature;gene=rpsC;inference=protein motif:PFAM:PF00417
AM286415.1	EMBL	gene	4266328	4266660	.	-	.	ID=gene3874;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;gene_synonym=eryB;locus_tag=YE3918
AM286415.1	EMBL	CDS	4266328	4266660	.	-	0	ID=cds3767;Parent=gene3874;Dbxref=EnsemblGenomes-Gn:YE3918,EnsemblGenomes-Tr:CAL13937,GOA:A1JS31,InterPro:IPR001063,InterPro:IPR005727,InterPro:IPR018260,NCBI_GP:CAL13937.1;Name=CAL13937.1;gbkey=CDS;gene=rplV;product=50S ribosomal protein L22;protein_id=CAL13937.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4266334	4266648	.	-	.	ID=id6844;Note=Pfam match to entry PF00237 Ribosomal_L22%2CRibosomal protein L22p/L17e%2C score 205.1%2C E-value 7e-59;gbkey=misc_feature;gene=rplV;inference=protein motif:PFAM:PF00237
AM286415.1	EMBL	sequence_feature	4266340	4266414	.	-	.	ID=id6845;Note=PS00464 Ribosomal protein L22 signature.;gbkey=misc_feature;gene=rplV;inference=protein motif:Prosite:PS00464
AM286415.1	EMBL	gene	4266675	4266953	.	-	.	ID=gene3875;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=YE3919
AM286415.1	EMBL	CDS	4266675	4266953	.	-	0	ID=cds3768;Parent=gene3875;Dbxref=EnsemblGenomes-Gn:YE3919,EnsemblGenomes-Tr:CAL13938,GOA:A1JS33,InterPro:IPR002222,InterPro:IPR005732,InterPro:IPR020934,InterPro:IPR023575,NCBI_GP:CAL13938.1;Name=CAL13938.1;gbkey=CDS;gene=rpsS;product=30S ribosomal protein S19;protein_id=CAL13938.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4266705	4266947	.	-	.	ID=id6846;Note=Pfam match to entry PF00203 Ribosomal_S19%2CRibosomal protein S19%2C score 189.4%2C E-value 3.7e-54;gbkey=misc_feature;gene=rpsS;inference=protein motif:PFAM:PF00203
AM286415.1	EMBL	sequence_feature	4266723	4266797	.	-	.	ID=id6847;Note=PS00323 Ribosomal protein S19 signature.;gbkey=misc_feature;gene=rpsS;inference=protein motif:Prosite:PS00323
AM286415.1	EMBL	gene	4266968	4267792	.	-	.	ID=gene3876;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=YE3920
AM286415.1	EMBL	CDS	4266968	4267792	.	-	0	ID=cds3769;Parent=gene3876;Dbxref=EnsemblGenomes-Gn:YE3920,EnsemblGenomes-Tr:CAL13939,GOA:A1JS34,InterPro:IPR002171,InterPro:IPR005880,InterPro:IPR008991,InterPro:IPR012340,InterPro:IPR014722,InterPro:IPR014726,InterPro:IPR022666,InterPro:IPR022669,InterPro:IPR022671,NCBI_GP:CAL13939.1;Name=CAL13939.1;gbkey=CDS;gene=rplB;product=50S ribosomal protein l2;protein_id=CAL13939.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4267040	4267423	.	-	.	ID=id6848;Note=Pfam match to entry PF03947 Ribosomal_L2_C%2CRibosomal Proteins L2%2C C-terminal domain%2C score 287.3%2CE-value 1.2e-83;gbkey=misc_feature;gene=rplB;inference=protein motif:PFAM:PF03947
AM286415.1	EMBL	sequence_feature	4267106	4267141	.	-	.	ID=id6849;Note=PS00467 Ribosomal protein L2 signature.;gbkey=misc_feature;gene=rplB;inference=protein motif:Prosite:PS00467
AM286415.1	EMBL	sequence_feature	4267439	4267669	.	-	.	ID=id6850;Note=Pfam match to entry PF00181 Ribosomal_L2%2C Ribosomal Proteins L2%2C RNA binding domain%2C score 168.9%2C E-value 5.4e-48;gbkey=misc_feature;gene=rplB;inference=protein motif:PFAM:PF00181
AM286415.1	EMBL	gene	4267809	4268111	.	-	.	ID=gene3877;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=YE3921
AM286415.1	EMBL	CDS	4267809	4268111	.	-	0	ID=cds3770;Parent=gene3877;Dbxref=EnsemblGenomes-Gn:YE3921,EnsemblGenomes-Tr:CAL13940,GOA:A1JS44,InterPro:IPR001014,InterPro:IPR012677,InterPro:IPR012678,InterPro:IPR013025,NCBI_GP:CAL13940.1;Name=CAL13940.1;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=CAL13940.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4267815	4268090	.	-	.	ID=id6851;Note=Pfam match to entry PF00276 Ribosomal_L23%2CRibosomal protein L23%2C score 152.4%2C E-value 5.1e-43;gbkey=misc_feature;gene=rplW;inference=protein motif:PFAM:PF00276
AM286415.1	EMBL	sequence_feature	4267824	4267871	.	-	.	ID=id6852;Note=PS00050 Ribosomal protein L23 signature.;gbkey=misc_feature;gene=rplW;inference=protein motif:Prosite:PS00050
AM286415.1	EMBL	sequence_feature	4267914	4268111	.	-	.	ID=id6853;Note=PS00430 TonB-dependent receptor proteins signature 1.;gbkey=misc_feature;gene=rplW;inference=protein motif:Prosite:PS00430
AM286415.1	EMBL	gene	4268108	4268713	.	-	.	ID=gene3878;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;gene_synonym=eryA;locus_tag=YE3922
AM286415.1	EMBL	CDS	4268108	4268713	.	-	0	ID=cds3771;Parent=gene3878;Dbxref=EnsemblGenomes-Gn:YE3922,EnsemblGenomes-Tr:CAL13941,GOA:A1JS46,InterPro:IPR002136,InterPro:IPR013005,InterPro:IPR023574,NCBI_GP:CAL13941.1;Name=CAL13941.1;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=CAL13941.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4268117	4268683	.	-	.	ID=id6854;Note=Pfam match to entry PF00573 Ribosomal_L4%2C Ribosomal protein L4/L1 family%2C score 197.2%2C E-value 1.7e-56;gbkey=misc_feature;gene=rplD;inference=protein motif:PFAM:PF00573
AM286415.1	EMBL	gene	4268724	4269353	.	-	.	ID=gene3879;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=YE3923
AM286415.1	EMBL	CDS	4268724	4269353	.	-	0	ID=cds3772;Parent=gene3879;Dbxref=EnsemblGenomes-Gn:YE3923,EnsemblGenomes-Tr:CAL13942,GOA:A1JS47,InterPro:IPR000597,InterPro:IPR009000,InterPro:IPR019926,InterPro:IPR019927,NCBI_GP:CAL13942.1;Name=CAL13942.1;gbkey=CDS;gene=rplC;product=50S ribosomal protein L3;protein_id=CAL13942.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4268742	4269332	.	-	.	ID=id6855;Note=Pfam match to entry PF00297 Ribosomal_L3%2C Ribosomal protein L3%2C score 344.4%2C E-value 8.2e-101;gbkey=misc_feature;gene=rplC;inference=protein motif:PFAM:PF00297
AM286415.1	EMBL	sequence_feature	4268982	4269053	.	-	.	ID=id6856;Note=PS00474 Ribosomal protein L3 signature.;gbkey=misc_feature;gene=rplC;inference=protein motif:Prosite:PS00474
AM286415.1	EMBL	gene	4269386	4269697	.	-	.	ID=gene3880;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=YE3924
AM286415.1	EMBL	CDS	4269386	4269697	.	-	0	ID=cds3773;Parent=gene3880;Dbxref=EnsemblGenomes-Gn:YE3924,EnsemblGenomes-Tr:CAL13943,GOA:A1JS48,InterPro:IPR001848,InterPro:IPR018268,InterPro:IPR027486,NCBI_GP:CAL13943.1;Name=CAL13943.1;gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=CAL13943.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4269398	4269685	.	-	.	ID=id6857;Note=Pfam match to entry PF00338 Ribosomal_S10%2CRibosomal protein S10p/S20e%2C score 212.6%2C E-value 4e-61;gbkey=misc_feature;gene=rpsJ;inference=protein motif:PFAM:PF00338
AM286415.1	EMBL	sequence_feature	4269566	4269613	.	-	.	ID=id6858;Note=PS00361 Ribosomal protein S10 signature.;gbkey=misc_feature;gene=rpsJ;inference=protein motif:Prosite:PS00361
AM286415.1	EMBL	gene	4270078	4270551	.	-	.	ID=gene3881;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=YE3925
AM286415.1	EMBL	CDS	4270078	4270551	.	-	0	ID=cds3774;Parent=gene3881;Dbxref=EnsemblGenomes-Gn:YE3925,EnsemblGenomes-Tr:CAL13944,GOA:A1JS50,InterPro:IPR002024,InterPro:IPR008331,InterPro:IPR009040,InterPro:IPR009078,InterPro:IPR012347,UniProtKB/TrEMBL:A1JS50,NCBI_GP:CAL13944.1;Name=CAL13944.1;gbkey=CDS;gene=bfr;product=bacterioferritin;protein_id=CAL13944.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4270120	4270530	.	-	.	ID=id6859;Note=Pfam match to entry PF00210 ferritin%2C Ferritin-like domain%2C score 182.3%2C E-value 5.1e-52;gbkey=misc_feature;gene=bfr;inference=protein motif:PFAM:PF00210
AM286415.1	EMBL	gene	4270631	4270825	.	-	.	ID=gene3882;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=YE3926
AM286415.1	EMBL	CDS	4270631	4270825	.	-	0	ID=cds3775;Parent=gene3882;Dbxref=EnsemblGenomes-Gn:YE3926,EnsemblGenomes-Tr:CAL13945,InterPro:IPR007419,UniProtKB/TrEMBL:A1JS51,NCBI_GP:CAL13945.1;Name=CAL13945.1;gbkey=CDS;gene=bfd;product=putative bacterioferritin-associated ferredoxin;protein_id=CAL13945.1;transl_table=11
AM286415.1	EMBL	gene	4270968	4272152	.	-	.	ID=gene3883;Name=tufA;gbkey=Gene;gene=tufA;gene_biotype=protein_coding;gene_synonym=tufB;locus_tag=YE3927
AM286415.1	EMBL	CDS	4270968	4272152	.	-	0	ID=cds3776;Parent=gene3883;Dbxref=EnsemblGenomes-Gn:YE3927,EnsemblGenomes-Tr:CAL13946,GOA:A1JS52,InterPro:IPR000795,InterPro:IPR004160,InterPro:IPR004161,InterPro:IPR004541,InterPro:IPR005225,InterPro:IPR009000,InterPro:IPR009001,InterPro:IPR027417,NCBI_GP:CAL13946.1;Name=CAL13946.1;gbkey=CDS;gene=tufA;product=elongation factor Tu;protein_id=CAL13946.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4270974	4271261	.	-	.	ID=id6860;Note=Pfam match to entry PF03143 GTP_EFTU_D3%2C Elongation factor Tu C-terminal domain%2C score 210.7%2C E-value 1.5e-60;gbkey=misc_feature;gene=tufA;inference=protein motif:PFAM:PF03143
AM286415.1	EMBL	sequence_feature	4271271	4271507	.	-	.	ID=id6861;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 108.1%2C E-value 1.1e-29;gbkey=misc_feature;gene=tufA;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	sequence_feature	4271541	4272125	.	-	.	ID=id6862;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu GTP binding domain%2C score 330.6%2C E-value 1.2e-96;gbkey=misc_feature;gene=tufA;inference=protein motif:PFAM:PF00009
AM286415.1	EMBL	sequence_feature	4271955	4272002	.	-	.	ID=id6863;Note=PS00301 GTP-binding elongation factors signature.;gbkey=misc_feature;gene=tufA;inference=protein motif:Prosite:PS00301
AM286415.1	EMBL	sequence_feature	4272075	4272098	.	-	.	ID=id6864;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=tufA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4272224	4274338	.	-	.	ID=gene3884;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;gene_synonym=far,fus;locus_tag=YE3928
AM286415.1	EMBL	CDS	4272224	4274338	.	-	0	ID=cds3777;Parent=gene3884;Dbxref=EnsemblGenomes-Gn:YE3928,EnsemblGenomes-Tr:CAL13947,GOA:A1JS54,InterPro:IPR000640,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR004540,InterPro:IPR005225,InterPro:IPR005517,InterPro:IPR009000,InterPro:IPR009022,InterPro:IPR014721,InterPro:IPR020568,InterPro:IPR027417,UniProtKB/TrEMBL:A1JS54,NCBI_GP:CAL13947.1;Name=CAL13947.1;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=CAL13947.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4272245	4272508	.	-	.	ID=id6865;Note=Pfam match to entry PF00679 EFG_C%2C Elongation factor G C-terminus%2C score 164.1%2C E-value 1.5e-46;gbkey=misc_feature;gene=fusA;inference=protein motif:PFAM:PF00679
AM286415.1	EMBL	sequence_feature	4272512	4272883	.	-	.	ID=id6866;Note=Pfam match to entry PF03764 EFG_IV%2C Elongation factor G%2C domain IV%2C score 237.5%2C E-value 1.2e-68;gbkey=misc_feature;gene=fusA;inference=protein motif:PFAM:PF03764
AM286415.1	EMBL	sequence_feature	4273145	4273384	.	-	.	ID=id6867;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 94.7%2C E-value 1.2e-25;gbkey=misc_feature;gene=fusA;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	sequence_feature	4273469	4274317	.	-	.	ID=id6868;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu GTP binding domain%2C score 389.9%2C E-value 1.7e-114;gbkey=misc_feature;gene=fusA;inference=protein motif:PFAM:PF00009
AM286415.1	EMBL	sequence_feature	4274141	4274188	.	-	.	ID=id6869;Note=PS00301 GTP-binding elongation factors signature.;gbkey=misc_feature;gene=fusA;inference=protein motif:Prosite:PS00301
AM286415.1	EMBL	sequence_feature	4274267	4274290	.	-	.	ID=id6870;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=fusA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4274432	4274902	.	-	.	ID=gene3885;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=YE3929
AM286415.1	EMBL	CDS	4274432	4274902	.	-	0	ID=cds3778;Parent=gene3885;Dbxref=EnsemblGenomes-Gn:YE3929,EnsemblGenomes-Tr:CAL13948,GOA:A1JS56,InterPro:IPR000235,InterPro:IPR005717,InterPro:IPR020606,InterPro:IPR023798,NCBI_GP:CAL13948.1;Name=CAL13948.1;gbkey=CDS;gene=rpsG;product=30S ribosomal protein S7;protein_id=CAL13948.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4274435	4274899	.	-	.	ID=id6871;Note=Pfam match to entry PF00177 Ribosomal_S7%2C Ribosomal protein S7p/S5e%2C score 329.0%2C E-value 3.4e-96;gbkey=misc_feature;gene=rpsG;inference=protein motif:PFAM:PF00177
AM286415.1	EMBL	sequence_feature	4274765	4274845	.	-	.	ID=id6872;Note=PS00052 Ribosomal protein S7 signature.;gbkey=misc_feature;gene=rpsG;inference=protein motif:Prosite:PS00052
AM286415.1	EMBL	gene	4274999	4275373	.	-	.	ID=gene3886;Name=rpsl;gbkey=Gene;gene=rpsl;gene_biotype=protein_coding;gene_synonym=strA;locus_tag=YE3930
AM286415.1	EMBL	CDS	4274999	4275373	.	-	0	ID=cds3779;Parent=gene3886;Dbxref=EnsemblGenomes-Gn:YE3930,EnsemblGenomes-Tr:CAL13949,GOA:A1JS57,InterPro:IPR005679,InterPro:IPR006032,InterPro:IPR012340,NCBI_GP:CAL13949.1;Name=CAL13949.1;gbkey=CDS;gene=rpsl;product=30S ribosomal protein S12;protein_id=CAL13949.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4275005	4275373	.	-	.	ID=id6873;Note=Pfam match to entry PF00164 Ribosomal_S12%2CRibosomal protein S12%2C score 277.1%2C E-value 1.5e-80;gbkey=misc_feature;gene=rpsl;inference=protein motif:PFAM:PF00164
AM286415.1	EMBL	sequence_feature	4275224	4275247	.	-	.	ID=id6874;Note=PS00055 Ribosomal protein S12 signature.;gbkey=misc_feature;gene=rpsl;inference=protein motif:Prosite:PS00055
AM286415.1	EMBL	gene	4275511	4275798	.	-	.	ID=gene3887;Name=YE3931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3931
AM286415.1	EMBL	CDS	4275511	4275798	.	-	0	ID=cds3780;Parent=gene3887;Dbxref=EnsemblGenomes-Gn:YE3931,EnsemblGenomes-Tr:CAL13950,GOA:A1JS58,InterPro:IPR007215,InterPro:IPR023526,InterPro:IPR027396,NCBI_GP:CAL13950.1;Name=CAL13950.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13950.1;transl_table=11
AM286415.1	EMBL	gene	4275818	4276183	.	-	.	ID=gene3888;Name=YE3932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3932
AM286415.1	EMBL	CDS	4275818	4276183	.	-	0	ID=cds3781;Parent=gene3888;Dbxref=EnsemblGenomes-Gn:YE3932,EnsemblGenomes-Tr:CAL13951,GOA:A1JS59,InterPro:IPR003787,InterPro:IPR017462,InterPro:IPR027396,NCBI_GP:CAL13951.1;Name=CAL13951.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13951.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4275821	4276174	.	-	.	ID=id6875;Note=Pfam match to entry PF02635 DrsE%2C DsrE/DsrF-like family%2C score 132.3%2C E-value 5.6e-37;gbkey=misc_feature;inference=protein motif:PFAM:PF02635
AM286415.1	EMBL	gene	4276183	4276578	.	-	.	ID=gene3889;Name=YE3933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3933
AM286415.1	EMBL	CDS	4276183	4276578	.	-	0	ID=cds3782;Parent=gene3889;Dbxref=EnsemblGenomes-Gn:YE3933,EnsemblGenomes-Tr:CAL13952,GOA:A1JS60,InterPro:IPR003787,InterPro:IPR017463,InterPro:IPR027396,NCBI_GP:CAL13952.1;Name=CAL13952.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13952.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4276186	4276569	.	-	.	ID=id6876;Note=Pfam match to entry PF02635 DrsE%2C DsrE/DsrF-like family%2C score 179.0%2C E-value 5e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF02635
AM286415.1	EMBL	gene	4276578	4277312	.	-	.	ID=gene3890;Name=YE3934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3934
AM286415.1	EMBL	CDS	4276578	4277312	.	-	0	ID=cds3783;Parent=gene3890;Dbxref=EnsemblGenomes-Gn:YE3934,EnsemblGenomes-Tr:CAL13953,GOA:A1JS61,InterPro:IPR013559,UniProtKB/TrEMBL:A1JS61,NCBI_GP:CAL13953.1;Name=CAL13953.1;gbkey=CDS;product=putative DNA-binding protein;protein_id=CAL13953.1;transl_table=11
AM286415.1	EMBL	gene	4277568	4278383	.	-	.	ID=gene3891;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=YE3935
AM286415.1	EMBL	CDS	4277568	4278383	.	-	0	ID=cds3784;Parent=gene3891;Dbxref=EnsemblGenomes-Gn:YE3935,EnsemblGenomes-Tr:CAL13954,GOA:A1JS63,InterPro:IPR000774,InterPro:IPR001179,InterPro:IPR023566,UniProtKB/TrEMBL:A1JS63,NCBI_GP:CAL13954.1;Name=CAL13954.1;gbkey=CDS;gene=fkpA;product=peptidyl-prolyl cis-trans isomerase;protein_id=CAL13954.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4277643	4277915	.	-	.	ID=id6877;Note=Pfam match to entry PF00254 FKBP%2C FKBP-type peptidyl-prolyl cis-trans isomerase%2C score 158.4%2C E-value 8.2e-45;gbkey=misc_feature;gene=fkpA;inference=protein motif:PFAM:PF00254
AM286415.1	EMBL	sequence_feature	4277703	4277789	.	-	.	ID=id6878;Note=PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2.;gbkey=misc_feature;gene=fkpA;inference=protein motif:Prosite:PS00454
AM286415.1	EMBL	sequence_feature	4277925	4278317	.	-	.	ID=id6879;Note=Pfam match to entry PF01346 FKBP_N%2C Domain amino terminal to FKBP-type peptidyl-prolyl isomerase%2C score 174.6%2C E-value 1.1e-49;gbkey=misc_feature;gene=fkpA;inference=protein motif:PFAM:PF01346
AM286415.1	EMBL	gene	4278667	4278882	.	+	.	ID=gene3892;Name=YE3936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3936
AM286415.1	EMBL	CDS	4278667	4278882	.	+	0	ID=cds3785;Parent=gene3892;Dbxref=EnsemblGenomes-Gn:YE3936,EnsemblGenomes-Tr:CAL13955,InterPro:IPR007236,NCBI_GP:CAL13955.1;Name=CAL13955.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13955.1;transl_table=11
AM286415.1	EMBL	gene	4278942	4279106	.	+	.	ID=gene3893;Name=YE3937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3937
AM286415.1	EMBL	CDS	4278942	4279106	.	+	0	ID=cds3786;Parent=gene3893;Dbxref=EnsemblGenomes-Gn:YE3937,EnsemblGenomes-Tr:CAL13956,UniProtKB/TrEMBL:A1JS65,NCBI_GP:CAL13956.1;Name=CAL13956.1;Note=Similar to Yersinia pestis hypothetical protein Ypo2189 SWALL:Q8ZEI1 (EMBL:AJ414151) (82 aa) fasta scores: E(): 3.5e-08%2C 68.88 38d in 45 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414151;product=Hypothetical protein;protein_id=CAL13956.1;transl_table=11
AM286415.1	EMBL	gene	4279137	4279721	.	-	.	ID=gene3894;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=YE3938
AM286415.1	EMBL	CDS	4279137	4279721	.	-	0	ID=cds3787;Parent=gene3894;Dbxref=EnsemblGenomes-Gn:YE3938,EnsemblGenomes-Tr:CAL13957,GOA:A1JS66,InterPro:IPR001179,InterPro:IPR023566,UniProtKB/TrEMBL:A1JS66,NCBI_GP:CAL13957.1;Name=CAL13957.1;gbkey=CDS;gene=slyD;product=peptidyl-prolyl cis-trans isomerase;protein_id=CAL13957.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4279311	4279613	.	-	.	ID=id6880;Note=Pfam match to entry PF00254 FKBP%2C FKBP-type peptidyl-prolyl cis-trans isomerase%2C score 40.7%2C E-value 2.2e-09;gbkey=misc_feature;gene=slyD;inference=protein motif:PFAM:PF00254
AM286415.1	EMBL	sequence_feature	4279515	4279601	.	-	.	ID=id6881;Note=PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2.;gbkey=misc_feature;gene=slyD;inference=protein motif:Prosite:PS00454
AM286415.1	EMBL	sequence_feature	4279644	4279691	.	-	.	ID=id6882;Note=PS00453 FKBP-type peptidyl-prolyl cis-trans isomerase signature 1.;gbkey=misc_feature;gene=slyD;inference=protein motif:Prosite:PS00453
AM286415.1	EMBL	gene	4279816	4280037	.	-	.	ID=gene3895;Name=YE3939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3939
AM286415.1	EMBL	CDS	4279816	4280037	.	-	0	ID=cds3788;Parent=gene3895;Dbxref=EnsemblGenomes-Gn:YE3939,EnsemblGenomes-Tr:CAL13958,InterPro:IPR012658,UniProtKB/TrEMBL:A1JS75,NCBI_GP:CAL13958.1;Name=CAL13958.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13958.1;transl_table=11
AM286415.1	EMBL	gene	4280052	4281860	.	-	.	ID=gene3896;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;gene_synonym=trkB;locus_tag=YE3940
AM286415.1	EMBL	CDS	4280052	4281860	.	-	0	ID=cds3789;Parent=gene3896;Dbxref=EnsemblGenomes-Gn:YE3940,EnsemblGenomes-Tr:CAL13959,GOA:A1JS76,InterPro:IPR003148,InterPro:IPR004771,InterPro:IPR006153,InterPro:IPR016040,InterPro:IPR020884,UniProtKB/TrEMBL:A1JS76,NCBI_GP:CAL13959.1;Name=CAL13959.1;gbkey=CDS;gene=kefB;product=probable potassium-efflux system protein;protein_id=CAL13959.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4280295	4280657	.	-	.	ID=id6883;Note=Pfam match to entry PF02254 TrkA-N%2C TrkA-N domain %2Cscore 50.8%2C E-value 2e-12;gbkey=misc_feature;gene=kefB;inference=protein motif:PFAM:PF02254
AM286415.1	EMBL	sequence_feature	4280697	4281842	.	-	.	ID=id6884;Note=Pfam match to entry PF00999 Na_H_Exchanger%2CSodium/hydrogen exchanger family%2C score 75.6%2C E-value 6.9e-20;gbkey=misc_feature;gene=kefB;inference=protein motif:PFAM:PF00999
AM286415.1	EMBL	sequence_feature	4281789	4281848	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	4281708	4281776	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	4281642	4281695	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	4281537	4281605	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	4281456	4281524	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	4281351	4281419	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	4281255	4281323	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	4281126	4281194	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	4281000	4281068	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	4280922	4280981	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	4280811	4280879	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	4280733	4280792	.	-	.	ID=id6885;Note=12 probable transmembrane helices predicted for YE3940 by TMHMM2.0 at aa 5-24%2C 29-51%2C 56-73%2C 86-108%2C113-135%2C 148-170%2C 180-202%2C 223-245%2C 265-287%2C 294-313%2C328-350 and 357-376;gbkey=misc_feature;gene=kefB;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	4281863	4282417	.	-	.	ID=gene3897;Name=YE3941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3941
AM286415.1	EMBL	CDS	4281863	4282417	.	-	0	ID=cds3790;Parent=gene3897;Dbxref=EnsemblGenomes-Gn:YE3941,EnsemblGenomes-Tr:CAL13960,GOA:A1JS77,InterPro:IPR003680,InterPro:IPR023947,InterPro:IPR029039,NCBI_GP:CAL13960.1;Name=CAL13960.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13960.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4281878	4282402	.	-	.	ID=id6886;Note=Pfam match to entry PF02525 Flavodoxin_2%2CFlavodoxin-like fold%2C score 210.3%2C E-value 1.9e-60;gbkey=misc_feature;inference=protein motif:PFAM:PF02525
AM286415.1	EMBL	gene	4282769	4284685	.	+	.	ID=gene3898;Name=YE3942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3942
AM286415.1	EMBL	CDS	4282769	4284685	.	+	0	ID=cds3791;Parent=gene3898;Dbxref=EnsemblGenomes-Gn:YE3942,EnsemblGenomes-Tr:CAL13961,GOA:A1JS79,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JS79,NCBI_GP:CAL13961.1;Name=CAL13961.1;Note=Similar to Salmonella typhimurium putative ATPase component of ABC transporter with duplicated ATPase domain YheS or stm3459 SWALL:Q8ZLL2 (EMBL:AE008858) (635 aa) fasta scores: E(): 1.5e-152%2C 82.14 38d in 633 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE008858;product=Putative ATPase component of an ABC transporter;protein_id=CAL13961.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4282847	4283434	.	+	.	ID=id6887;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 150.0%2C E-value 2.8e-42;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4282868	4282891	.	+	.	ID=id6888;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4283216	4283260	.	+	.	ID=id6889;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	4283780	4284277	.	+	.	ID=id6890;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 140.2%2C E-value 2.5e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4283801	4283824	.	+	.	ID=id6891;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4284059	4284103	.	+	.	ID=id6892;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	4284748	4285716	.	+	.	ID=gene3899;Name=YE3943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3943
AM286415.1	EMBL	CDS	4284748	4285716	.	+	0	ID=cds3792;Parent=gene3899;Dbxref=EnsemblGenomes-Gn:YE3943,EnsemblGenomes-Tr:CAL13962,GOA:A1JS81,InterPro:IPR001173,InterPro:IPR029044,UniProtKB/TrEMBL:A1JS81,NCBI_GP:CAL13962.1;Name=CAL13962.1;gbkey=CDS;product=putative glycosyl transferase;protein_id=CAL13962.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4284751	4285299	.	+	.	ID=id6893;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 108.4%2C E-value 9.2e-30;gbkey=misc_feature;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	4285808	4286785	.	+	.	ID=gene3900;Name=YE3944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3944
AM286415.1	EMBL	CDS	4285808	4286785	.	+	0	ID=cds3793;Parent=gene3900;Dbxref=EnsemblGenomes-Gn:YE3944,EnsemblGenomes-Tr:CAL13963,GOA:A1JS82,InterPro:IPR002201,UniProtKB/TrEMBL:A1JS82,NCBI_GP:CAL13963.1;Name=CAL13963.1;gbkey=CDS;product=putative sugar transferase;protein_id=CAL13963.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4286042	4286761	.	+	.	ID=id6894;Note=Pfam match to entry PF01075 Glyco_transf_9%2CGlycosyltransferase family 9 (heptosyltransferase)%2C score -26.8%2C E-value 3.1e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01075
AM286415.1	EMBL	sequence_feature	4286336	4286380	.	+	.	ID=id6895;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	4286814	4287662	.	-	.	ID=gene3901;Name=tauD;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;gene_synonym=ssiD;locus_tag=YE3945
AM286415.1	EMBL	CDS	4286814	4287662	.	-	0	ID=cds3794;Parent=gene3901;Dbxref=EnsemblGenomes-Gn:YE3945,EnsemblGenomes-Tr:CAL13964,GOA:A1JS83,InterPro:IPR003819,UniProtKB/TrEMBL:A1JS83,NCBI_GP:CAL13964.1;Name=CAL13964.1;gbkey=CDS;gene=tauD;product=putative taurine dioxygenase;protein_id=CAL13964.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4286820	4287650	.	-	.	ID=id6896;Note=Pfam match to entry PF02668 TauD%2C Taurine catabolism dioxygenase TauD%2C TfdA family%2C score 495.5%2CE-value 2.7e-146;gbkey=misc_feature;gene=tauD;inference=protein motif:PFAM:PF02668
AM286415.1	EMBL	sequence_feature	4287291	4287308	.	-	.	ID=id6897;Note=PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide.;gbkey=misc_feature;gene=tauD;inference=protein motif:Prosite:PS00343
AM286415.1	EMBL	gene	4287659	4288462	.	-	.	ID=gene3902;Name=tauC;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;gene_synonym=ssiC;locus_tag=YE3946
AM286415.1	EMBL	CDS	4287659	4288462	.	-	0	ID=cds3795;Parent=gene3902;Dbxref=EnsemblGenomes-Gn:YE3946,EnsemblGenomes-Tr:CAL13965,GOA:A1JS85,InterPro:IPR000515,UniProtKB/TrEMBL:A1JS85,NCBI_GP:CAL13965.1;Name=CAL13965.1;gbkey=CDS;gene=tauC;product=putative taurine transport system permease protein;protein_id=CAL13965.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4288346	4288414	.	-	.	ID=id6898;Note=6 probable transmembrane helices predicted for YE3946 by TMHMM2.0 at aa 17-39%2C 77-99%2C 111-133%2C 138-157%2C178-200 and 228-250;gbkey=misc_feature;gene=tauC;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4288166	4288234	.	-	.	ID=id6898;Note=6 probable transmembrane helices predicted for YE3946 by TMHMM2.0 at aa 17-39%2C 77-99%2C 111-133%2C 138-157%2C178-200 and 228-250;gbkey=misc_feature;gene=tauC;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4288064	4288132	.	-	.	ID=id6898;Note=6 probable transmembrane helices predicted for YE3946 by TMHMM2.0 at aa 17-39%2C 77-99%2C 111-133%2C 138-157%2C178-200 and 228-250;gbkey=misc_feature;gene=tauC;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4287992	4288051	.	-	.	ID=id6898;Note=6 probable transmembrane helices predicted for YE3946 by TMHMM2.0 at aa 17-39%2C 77-99%2C 111-133%2C 138-157%2C178-200 and 228-250;gbkey=misc_feature;gene=tauC;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4287863	4287931	.	-	.	ID=id6898;Note=6 probable transmembrane helices predicted for YE3946 by TMHMM2.0 at aa 17-39%2C 77-99%2C 111-133%2C 138-157%2C178-200 and 228-250;gbkey=misc_feature;gene=tauC;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4287713	4287781	.	-	.	ID=id6898;Note=6 probable transmembrane helices predicted for YE3946 by TMHMM2.0 at aa 17-39%2C 77-99%2C 111-133%2C 138-157%2C178-200 and 228-250;gbkey=misc_feature;gene=tauC;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	4287782	4287997	.	-	.	ID=id6899;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 47.7%2C E-value 1.7e-11;gbkey=misc_feature;gene=tauC;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	4287908	4287994	.	-	.	ID=id6900;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=tauC;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	4288546	4289313	.	-	.	ID=gene3903;Name=tauB;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;gene_synonym=ssiB;locus_tag=YE3947
AM286415.1	EMBL	CDS	4288546	4289313	.	-	0	ID=cds3796;Parent=gene3903;Dbxref=EnsemblGenomes-Gn:YE3947,EnsemblGenomes-Tr:CAL13966,GOA:A1JS87,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR015859,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JS87,NCBI_GP:CAL13966.1;Name=CAL13966.1;gbkey=CDS;gene=tauB;product=putative taurine transport ATP-binding protein;protein_id=CAL13966.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4288699	4289235	.	-	.	ID=id6901;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 210.7%2C E-value 1.5e-60;gbkey=misc_feature;gene=tauB;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4288885	4288929	.	-	.	ID=id6902;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=tauB;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	4289191	4289214	.	-	.	ID=id6903;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=tauB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4289322	4290278	.	-	.	ID=gene3904;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;gene_synonym=ssiA;locus_tag=YE3948
AM286415.1	EMBL	CDS	4289322	4290278	.	-	0	ID=cds3797;Parent=gene3904;Dbxref=EnsemblGenomes-Gn:YE3948,EnsemblGenomes-Tr:CAL13967,GOA:A1JS88,InterPro:IPR001638,InterPro:IPR007210,InterPro:IPR010068,UniProtKB/TrEMBL:A1JS88,NCBI_GP:CAL13967.1;Name=CAL13967.1;gbkey=CDS;gene=tauA;product=putative taurine-binding periplasmic protein precursor;protein_id=CAL13967.1;transl_table=11
AM286415.1	EMBL	gene	4290637	4291425	.	-	.	ID=gene3905;Name=YE3949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3949
AM286415.1	EMBL	CDS	4290637	4291425	.	-	0	ID=cds3798;Parent=gene3905;Dbxref=EnsemblGenomes-Gn:YE3949,EnsemblGenomes-Tr:CAL13968,GOA:A1JS89,InterPro:IPR003719,UniProtKB/TrEMBL:A1JS89,NCBI_GP:CAL13968.1;Name=CAL13968.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa3578 SWALL:YZ78_PSEAE (SWALL:Q9HY42) (261 aa) fasta scores: E(): 3.6e-42%2C 50.37 38d in 264 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9HY42;product=Hypothetical protein;protein_id=CAL13968.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4290649	4291422	.	-	.	ID=id6904;Note=Pfam match to entry PF02567 PhzC-PhzF%2C Phenazine biosynthesis-like protein%2C score 185.2%2C E-value 6.8e-53;gbkey=misc_feature;inference=protein motif:PFAM:PF02567
AM286415.1	EMBL	gene	4291571	4292173	.	-	.	ID=gene3906;Name=YE3950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3950
AM286415.1	EMBL	CDS	4291571	4292173	.	-	0	ID=cds3799;Parent=gene3906;Dbxref=EnsemblGenomes-Gn:YE3950,EnsemblGenomes-Tr:CAL13969,GOA:A1JS91,InterPro:IPR001123,UniProtKB/TrEMBL:A1JS91,NCBI_GP:CAL13969.1;Name=CAL13969.1;gbkey=CDS;product=putative ABC-transport protein;protein_id=CAL13969.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4292093	4292161	.	-	.	ID=id6905;Note=6 probable transmembrane helices predicted for YE3950 by TMHMM2.0 at aa 5-27%2C 40-62%2C 66-88%2C 118-140%2C145-167 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4291988	4292056	.	-	.	ID=id6905;Note=6 probable transmembrane helices predicted for YE3950 by TMHMM2.0 at aa 5-27%2C 40-62%2C 66-88%2C 118-140%2C145-167 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4291910	4291978	.	-	.	ID=id6905;Note=6 probable transmembrane helices predicted for YE3950 by TMHMM2.0 at aa 5-27%2C 40-62%2C 66-88%2C 118-140%2C145-167 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4291754	4291822	.	-	.	ID=id6905;Note=6 probable transmembrane helices predicted for YE3950 by TMHMM2.0 at aa 5-27%2C 40-62%2C 66-88%2C 118-140%2C145-167 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4291673	4291741	.	-	.	ID=id6905;Note=6 probable transmembrane helices predicted for YE3950 by TMHMM2.0 at aa 5-27%2C 40-62%2C 66-88%2C 118-140%2C145-167 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4291577	4291636	.	-	.	ID=id6905;Note=6 probable transmembrane helices predicted for YE3950 by TMHMM2.0 at aa 5-27%2C 40-62%2C 66-88%2C 118-140%2C145-167 and 180-199;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	4291688	4291732	.	-	.	ID=id6906;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	4291799	4291969	.	-	.	ID=id6907;Note=Pfam match to entry PF01810 LysE%2C LysE type translocator%2C score 24.1%2C E-value 9.7e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF01810
AM286415.1	EMBL	gene	4292275	4293255	.	+	.	ID=gene3907;Name=YE3951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3951
AM286415.1	EMBL	CDS	4292275	4293255	.	+	0	ID=cds3800;Parent=gene3907;Dbxref=EnsemblGenomes-Gn:YE3951,EnsemblGenomes-Tr:CAL13970,InterPro:IPR000073,InterPro:IPR000952,InterPro:IPR012020,InterPro:IPR029058,UniProtKB/TrEMBL:A1JS93,NCBI_GP:CAL13970.1;Name=CAL13970.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13970.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4292539	4293228	.	+	.	ID=id6908;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 65.3%2C E-value 8.5e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF00561
AM286415.1	EMBL	sequence_feature	4292950	4293075	.	+	.	ID=id6909;Note=PS01133 Uncharacterized protein family UPF0017 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01133
AM286415.1	EMBL	gene	4293252	4293488	.	+	.	ID=gene3908;Name=YE3952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3952
AM286415.1	EMBL	CDS	4293252	4293488	.	+	0	ID=cds3801;Parent=gene3908;Dbxref=EnsemblGenomes-Gn:YE3952,EnsemblGenomes-Tr:CAL13971,InterPro:IPR010648,NCBI_GP:CAL13971.1;Name=CAL13971.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13971.1;transl_table=11
AM286415.1	EMBL	gene	4293630	4294499	.	+	.	ID=gene3909;Name=prk;gbkey=Gene;gene=prk;gene_biotype=protein_coding;locus_tag=YE3953
AM286415.1	EMBL	CDS	4293630	4294499	.	+	0	ID=cds3802;Parent=gene3909;Dbxref=EnsemblGenomes-Gn:YE3953,EnsemblGenomes-Tr:CAL13972,GOA:A1JS95,InterPro:IPR006082,InterPro:IPR006083,InterPro:IPR027417,UniProtKB/TrEMBL:A1JS95,NCBI_GP:CAL13972.1;Name=CAL13972.1;gbkey=CDS;gene=prk;product=phosphoribulokinase 1;protein_id=CAL13972.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4293648	4294448	.	+	.	ID=id6910;Note=Pfam match to entry PF00485 PRK%2CPhosphoribulokinase / Uridine kinase family%2C score 459.2%2CE-value 2.3e-135;gbkey=misc_feature;gene=prk;inference=protein motif:PFAM:PF00485
AM286415.1	EMBL	sequence_feature	4294119	4294160	.	+	.	ID=id6911;Note=PS00567 Phosphoribulokinase signature.;gbkey=misc_feature;gene=prk;inference=protein motif:Prosite:PS00567
AM286415.1	EMBL	gene	4294692	4295099	.	-	.	ID=gene3910;Name=YE3954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3954
AM286415.1	EMBL	CDS	4294692	4295099	.	-	0	ID=cds3803;Parent=gene3910;Dbxref=EnsemblGenomes-Gn:YE3954,EnsemblGenomes-Tr:CAL13973,GOA:A1JS97,InterPro:IPR003718,InterPro:IPR015946,UniProtKB/TrEMBL:A1JS97,NCBI_GP:CAL13973.1;Name=CAL13973.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13973.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4294704	4295093	.	-	.	ID=id6912;Note=Pfam match to entry PF02566 OsmC%2C OsmC-like protein%2C score 162.1%2C E-value 6.3e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF02566
AM286415.1	EMBL	gene	4295434	4296066	.	+	.	ID=gene3911;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;gene_synonym=cap,csm;locus_tag=YE3955
AM286415.1	EMBL	CDS	4295434	4296066	.	+	0	ID=cds3804;Parent=gene3911;Dbxref=EnsemblGenomes-Gn:YE3955,EnsemblGenomes-Tr:CAL13974,GOA:A1JS98,InterPro:IPR000595,InterPro:IPR001808,InterPro:IPR011991,InterPro:IPR012318,InterPro:IPR014710,InterPro:IPR018335,InterPro:IPR018488,InterPro:IPR018490,UniProtKB/TrEMBL:A1JS98,NCBI_GP:CAL13974.1;Name=CAL13974.1;gbkey=CDS;gene=crp;product=cAMP-regulatory protein;protein_id=CAL13974.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4295485	4295769	.	+	.	ID=id6913;Note=Pfam match to entry PF00027 cNMP_binding%2C Cyclic nucleotide-binding domain%2C score 117.9%2C E-value 1.2e-32;gbkey=misc_feature;gene=crp;inference=protein motif:PFAM:PF00027
AM286415.1	EMBL	sequence_feature	4295521	4295571	.	+	.	ID=id6914;Note=PS00888 Cyclic nucleotide-binding domain signature 1.;gbkey=misc_feature;gene=crp;inference=protein motif:Prosite:PS00888
AM286415.1	EMBL	sequence_feature	4295644	4295700	.	+	.	ID=id6915;Note=PS00889 Cyclic nucleotide-binding domain signature 2.;gbkey=misc_feature;gene=crp;inference=protein motif:Prosite:PS00889
AM286415.1	EMBL	sequence_feature	4295929	4296024	.	+	.	ID=id6916;Note=Pfam match to entry PF00325 crp%2C Bacterial regulatory proteins%2C crp family%2C score 61.3%2C E-value 1.4e-15;gbkey=misc_feature;gene=crp;inference=protein motif:PFAM:PF00325
AM286415.1	EMBL	sequence_feature	4295935	4296006	.	+	.	ID=id6917;Note=PS00042 Bacterial regulatory proteins%2C crp family signature.;gbkey=misc_feature;gene=crp;inference=protein motif:Prosite:PS00042
AM286415.1	EMBL	gene	4296139	4298259	.	+	.	ID=gene3912;Name=YE3956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3956
AM286415.1	EMBL	CDS	4296139	4298259	.	+	0	ID=cds3805;Parent=gene3912;Dbxref=EnsemblGenomes-Gn:YE3956,EnsemblGenomes-Tr:CAL13975,InterPro:IPR010020,UniProtKB/TrEMBL:A1JS99,NCBI_GP:CAL13975.1;Name=CAL13975.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13975.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4296175	4296243	.	+	.	ID=id6918;Note=8 probable transmembrane helices predicted for YE3956 by TMHMM2.0 at aa 13-35%2C 81-103%2C 108-127%2C 132-154%2C416-433%2C 437-454%2C 461-478 and 488-507;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	4296379	4296447	.	+	.	ID=id6918;Note=8 probable transmembrane helices predicted for YE3956 by TMHMM2.0 at aa 13-35%2C 81-103%2C 108-127%2C 132-154%2C416-433%2C 437-454%2C 461-478 and 488-507;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	4296460	4296519	.	+	.	ID=id6918;Note=8 probable transmembrane helices predicted for YE3956 by TMHMM2.0 at aa 13-35%2C 81-103%2C 108-127%2C 132-154%2C416-433%2C 437-454%2C 461-478 and 488-507;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	4296532	4296600	.	+	.	ID=id6918;Note=8 probable transmembrane helices predicted for YE3956 by TMHMM2.0 at aa 13-35%2C 81-103%2C 108-127%2C 132-154%2C416-433%2C 437-454%2C 461-478 and 488-507;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	4297384	4297437	.	+	.	ID=id6918;Note=8 probable transmembrane helices predicted for YE3956 by TMHMM2.0 at aa 13-35%2C 81-103%2C 108-127%2C 132-154%2C416-433%2C 437-454%2C 461-478 and 488-507;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	4297447	4297500	.	+	.	ID=id6918;Note=8 probable transmembrane helices predicted for YE3956 by TMHMM2.0 at aa 13-35%2C 81-103%2C 108-127%2C 132-154%2C416-433%2C 437-454%2C 461-478 and 488-507;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	4297519	4297572	.	+	.	ID=id6918;Note=8 probable transmembrane helices predicted for YE3956 by TMHMM2.0 at aa 13-35%2C 81-103%2C 108-127%2C 132-154%2C416-433%2C 437-454%2C 461-478 and 488-507;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	4297600	4297659	.	+	.	ID=id6918;Note=8 probable transmembrane helices predicted for YE3956 by TMHMM2.0 at aa 13-35%2C 81-103%2C 108-127%2C 132-154%2C416-433%2C 437-454%2C 461-478 and 488-507;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	gene	4298476	4299693	.	-	.	ID=gene3913;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=YE3957
AM286415.1	EMBL	CDS	4298476	4299693	.	-	0	ID=cds3806;Parent=gene3913;Dbxref=EnsemblGenomes-Gn:YE3957,EnsemblGenomes-Tr:CAL13976,GOA:A1JSA1,InterPro:IPR004636,InterPro:IPR005814,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,InterPro:IPR017652,UniProtKB/TrEMBL:A1JSA1,NCBI_GP:CAL13976.1;Name=CAL13976.1;gbkey=CDS;gene=argD;product=acetylornithine aminotransferase;protein_id=CAL13976.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4298485	4299654	.	-	.	ID=id6919;Note=Pfam match to entry PF00202 aminotran_3%2CAminotransferase class-III%2C score 626.1%2C E-value 1.3e-185;gbkey=misc_feature;gene=argD;inference=protein motif:PFAM:PF00202
AM286415.1	EMBL	sequence_feature	4298917	4299030	.	-	.	ID=id6920;Note=PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=argD;inference=protein motif:Prosite:PS00600
AM286415.1	EMBL	gene	4299826	4300401	.	-	.	ID=gene3914;Name=pabA;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=YE3958
AM286415.1	EMBL	CDS	4299826	4300401	.	-	0	ID=cds3807;Parent=gene3914;Dbxref=EnsemblGenomes-Gn:YE3958,EnsemblGenomes-Tr:CAL13977,GOA:A1JSA2,InterPro:IPR006221,InterPro:IPR017926,InterPro:IPR029062,UniProtKB/TrEMBL:A1JSA2,NCBI_GP:CAL13977.1;Name=CAL13977.1;gbkey=CDS;gene=pabA;product=para-aminobenzoate synthase glutamine amidotransferase component II;protein_id=CAL13977.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4299829	4300395	.	-	.	ID=id6921;Note=Pfam match to entry PF00117 GATase%2C Glutamine amidotransferase class-I%2C score 302.6%2C E-value 3.1e-88;gbkey=misc_feature;gene=pabA;inference=protein motif:PFAM:PF00117
AM286415.1	EMBL	sequence_feature	4300147	4300182	.	-	.	ID=id6922;Note=PS00442 Glutamine amidotransferases class-I active site.;gbkey=misc_feature;gene=pabA;inference=protein motif:Prosite:PS00442
AM286415.1	EMBL	gene	4300422	4301885	.	-	.	ID=gene3915;Name=YE3959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3959
AM286415.1	EMBL	CDS	4300422	4301885	.	-	0	ID=cds3808;Parent=gene3915;Dbxref=EnsemblGenomes-Gn:YE3959,EnsemblGenomes-Tr:CAL13978,InterPro:IPR003593,InterPro:IPR008571,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSA4,NCBI_GP:CAL13978.1;Name=CAL13978.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13978.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4301820	4301843	.	-	.	ID=id6923;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4302067	4302636	.	-	.	ID=gene3916;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rot,rotA;locus_tag=YE3960
AM286415.1	EMBL	CDS	4302067	4302636	.	-	0	ID=cds3809;Parent=gene3916;Dbxref=EnsemblGenomes-Gn:YE3960,EnsemblGenomes-Tr:CAL13979,GOA:A1JSA5,InterPro:IPR002130,InterPro:IPR020892,InterPro:IPR029000,UniProtKB/TrEMBL:A1JSA5,NCBI_GP:CAL13979.1;Name=CAL13979.1;gbkey=CDS;gene=ppiA;product=peptidyl-prolyl cis-trans isomerase A;protein_id=CAL13979.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4302070	4302558	.	-	.	ID=id6924;Note=Pfam match to entry PF00160 pro_isomerase%2CCyclophilin type peptidyl-prolyl cis-trans isomerase %2Cscore 246.1%2C E-value 3.1e-71;gbkey=misc_feature;gene=ppiA;inference=protein motif:PFAM:PF00160
AM286415.1	EMBL	sequence_feature	4302394	4302447	.	-	.	ID=id6925;Note=PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.;gbkey=misc_feature;gene=ppiA;inference=protein motif:Prosite:PS00170
AM286415.1	EMBL	gene	4302989	4304302	.	+	.	ID=gene3917;Name=YE3961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3961
AM286415.1	EMBL	CDS	4302989	4304302	.	+	0	ID=cds3810;Parent=gene3917;Dbxref=EnsemblGenomes-Gn:YE3961,EnsemblGenomes-Tr:CAL13980,GOA:A1JSA7,InterPro:IPR001088,InterPro:IPR015955,InterPro:IPR016040,InterPro:IPR019802,InterPro:IPR022616,UniProtKB/TrEMBL:A1JSA7,NCBI_GP:CAL13980.1;Name=CAL13980.1;gbkey=CDS;product=putative glycosyl hydrolase;protein_id=CAL13980.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4303001	4304218	.	+	.	ID=id6926;Note=Pfam match to entry PF02056 Glyco_hydro_4%2C Family 4 glycosyl hydrolase%2C score 443.0%2C E-value 1.7e-130;gbkey=misc_feature;inference=protein motif:PFAM:PF02056
AM286415.1	EMBL	sequence_feature	4303409	4303501	.	+	.	ID=id6927;Note=PS01324 Glycosyl hydrolases family 4 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01324
AM286415.1	EMBL	gene	4304384	4305364	.	+	.	ID=gene3918;Name=YE3962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3962
AM286415.1	EMBL	CDS	4304384	4305364	.	+	0	ID=cds3811;Parent=gene3918;Dbxref=EnsemblGenomes-Gn:YE3962,EnsemblGenomes-Tr:CAL13981,GOA:A1JSA8,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JSA8,NCBI_GP:CAL13981.1;Name=CAL13981.1;gbkey=CDS;product=LacI-family transcriptional regulator;protein_id=CAL13981.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4304384	4304464	.	+	.	ID=id6928;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 42.4%2C E-value 6.5e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	4304393	4304449	.	+	.	ID=id6929;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	sequence_feature	4304558	4305340	.	+	.	ID=id6930;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 63.4%2C E-value 3.2e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	4305677	4306861	.	+	.	ID=gene3919;Name=YE3963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3963
AM286415.1	EMBL	CDS	4305677	4306861	.	+	0	ID=cds3812;Parent=gene3919;Dbxref=EnsemblGenomes-Gn:YE3963,EnsemblGenomes-Tr:CAL13982,GOA:A1JSB0,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,InterPro:IPR023528,NCBI_GP:CAL13982.1;Name=CAL13982.1;gbkey=CDS;product=conserved integral membrane protein;protein_id=CAL13982.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4305713	4305781	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	4305809	4305877	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	4305902	4305970	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	4305980	4306039	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	4306076	4306144	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	4306154	4306222	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	4306295	4306363	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	4306406	4306474	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	4306493	4306546	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	4306574	4306642	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	4306676	4306744	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	4306757	4306825	.	+	.	ID=id6931;Note=12 probable transmembrane helices predicted for YE3963 by TMHMM2.0 at aa 13-35%2C 45-67%2C 76-98%2C 102-121%2C134-156%2C 160-182%2C 207-229%2C 244-266%2C 273-290%2C 300-322%2C334-356 and 361-383;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	gene	4306911	4308218	.	-	.	ID=gene3920;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=YE3964
AM286415.1	EMBL	CDS	4306911	4308218	.	-	0	ID=cds3813;Parent=gene3920;Dbxref=EnsemblGenomes-Gn:YE3964,EnsemblGenomes-Tr:CAL13983,GOA:A1JSB1,InterPro:IPR011059,InterPro:IPR013108,UniProtKB/TrEMBL:A1JSB1,NCBI_GP:CAL13983.1;Name=CAL13983.1;gbkey=CDS;gene=codA;product=cytosine deaminase;protein_id=CAL13983.1;transl_table=11
AM286415.1	EMBL	gene	4308487	4311033	.	+	.	ID=gene3921;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=YE3965
AM286415.1	EMBL	CDS	4308487	4311033	.	+	0	ID=cds3814;Parent=gene3921;Dbxref=EnsemblGenomes-Gn:YE3965,EnsemblGenomes-Tr:CAL13984,GOA:A1JSB3,InterPro:IPR001327,InterPro:IPR005117,InterPro:IPR006066,InterPro:IPR006067,InterPro:IPR007419,InterPro:IPR012744,InterPro:IPR013027,InterPro:IPR017121,InterPro:IPR023753,UniProtKB/TrEMBL:A1JSB3,NCBI_GP:CAL13984.1;Name=CAL13984.1;gbkey=CDS;gene=nirB;product=nitrite reductase;protein_id=CAL13984.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4308499	4309362	.	+	.	ID=id6932;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 284.0%2CE-value 1.2e-82;gbkey=misc_feature;gene=nirB;inference=protein motif:PFAM:PF00070
AM286415.1	EMBL	sequence_feature	4310149	4310352	.	+	.	ID=id6933;Note=Pfam match to entry PF03460 NIR_SIR_ferr%2CNitrite/Sulfite reductase ferredoxin-like half domain %2Cscore 78.9%2C E-value 6.7e-21;gbkey=misc_feature;gene=nirB;inference=protein motif:PFAM:PF03460
AM286415.1	EMBL	sequence_feature	4310389	4310583	.	+	.	ID=id6934;Note=Pfam match to entry PF01077 NIR_SIR%2C Nitrite and sulphite reductase 4Fe-4S domain%2C score 94.1%2C E-value 1.8e-25;gbkey=misc_feature;gene=nirB;inference=protein motif:PFAM:PF01077
AM286415.1	EMBL	sequence_feature	4310518	4310568	.	+	.	ID=id6935;Note=PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site.;gbkey=misc_feature;gene=nirB;inference=protein motif:Prosite:PS00365
AM286415.1	EMBL	gene	4311030	4311356	.	+	.	ID=gene3922;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=YE3966
AM286415.1	EMBL	CDS	4311030	4311356	.	+	0	ID=cds3815;Parent=gene3922;Dbxref=EnsemblGenomes-Gn:YE3966,EnsemblGenomes-Tr:CAL13985,GOA:A1JSB4,InterPro:IPR012748,InterPro:IPR017881,InterPro:IPR017941,UniProtKB/TrEMBL:A1JSB4,NCBI_GP:CAL13985.1;Name=CAL13985.1;gbkey=CDS;gene=nirD;product=nitrite reductase [NAD;protein_id=CAL13985.1;transl_table=11
AM286415.1	EMBL	gene	4311547	4312353	.	+	.	ID=gene3923;Name=nirC;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=YE3967
AM286415.1	EMBL	CDS	4311547	4312353	.	+	0	ID=cds3816;Parent=gene3923;Dbxref=EnsemblGenomes-Gn:YE3967,EnsemblGenomes-Tr:CAL13986,GOA:A1JSB6,InterPro:IPR000292,InterPro:IPR023271,InterPro:IPR024002,UniProtKB/TrEMBL:A1JSB6,NCBI_GP:CAL13986.1;Name=CAL13986.1;gbkey=CDS;gene=nirC;product=putative nitrite transporter;protein_id=CAL13986.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4311547	4312308	.	+	.	ID=id6936;Note=Pfam match to entry PF01226 Form_Nir_trans%2CFormate/nitrite transporter%2C score 432.2%2C E-value 3e-127;gbkey=misc_feature;gene=nirC;inference=protein motif:PFAM:PF01226
AM286415.1	EMBL	sequence_feature	4311625	4311693	.	+	.	ID=id6937;Note=6 probable transmembrane helices predicted for YE3967 by TMHMM2.0 at aa 27-49%2C 59-81%2C 102-124%2C 150-172%2C184-206 and 226-248;gbkey=misc_feature;gene=nirC;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4311721	4311789	.	+	.	ID=id6937;Note=6 probable transmembrane helices predicted for YE3967 by TMHMM2.0 at aa 27-49%2C 59-81%2C 102-124%2C 150-172%2C184-206 and 226-248;gbkey=misc_feature;gene=nirC;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4311850	4311918	.	+	.	ID=id6937;Note=6 probable transmembrane helices predicted for YE3967 by TMHMM2.0 at aa 27-49%2C 59-81%2C 102-124%2C 150-172%2C184-206 and 226-248;gbkey=misc_feature;gene=nirC;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4311994	4312062	.	+	.	ID=id6937;Note=6 probable transmembrane helices predicted for YE3967 by TMHMM2.0 at aa 27-49%2C 59-81%2C 102-124%2C 150-172%2C184-206 and 226-248;gbkey=misc_feature;gene=nirC;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4312096	4312164	.	+	.	ID=id6937;Note=6 probable transmembrane helices predicted for YE3967 by TMHMM2.0 at aa 27-49%2C 59-81%2C 102-124%2C 150-172%2C184-206 and 226-248;gbkey=misc_feature;gene=nirC;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4312222	4312290	.	+	.	ID=id6937;Note=6 probable transmembrane helices predicted for YE3967 by TMHMM2.0 at aa 27-49%2C 59-81%2C 102-124%2C 150-172%2C184-206 and 226-248;gbkey=misc_feature;gene=nirC;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	4311763	4311792	.	+	.	ID=id6938;Note=PS01005 Formate and nitrite transporters signature 1.;gbkey=misc_feature;gene=nirC;inference=protein motif:Prosite:PS01005
AM286415.1	EMBL	sequence_feature	4312015	4312047	.	+	.	ID=id6939;Note=PS01006 Formate and nitrite transporters signature 2.;gbkey=misc_feature;gene=nirC;inference=protein motif:Prosite:PS01006
AM286415.1	EMBL	gene	4312558	4313976	.	+	.	ID=gene3924;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=YE3968
AM286415.1	EMBL	CDS	4312558	4313976	.	+	0	ID=cds3817;Parent=gene3924;Dbxref=EnsemblGenomes-Gn:YE3968,EnsemblGenomes-Tr:CAL13987,GOA:A1JSB7,InterPro:IPR000878,InterPro:IPR003043,InterPro:IPR006366,InterPro:IPR006367,InterPro:IPR012409,InterPro:IPR014776,InterPro:IPR014777,InterPro:IPR016040,InterPro:IPR019478,NCBI_GP:CAL13987.1;Name=CAL13987.1;gbkey=CDS;gene=cysG;product=siroheme synthase;protein_id=CAL13987.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4313206	4313838	.	+	.	ID=id6940;Note=Pfam match to entry PF00590 TP_methylase%2CTetrapyrrole (Corrin/Porphyrin) Methylases%2C score 319.3%2CE-value 3e-93;gbkey=misc_feature;gene=cysG;inference=protein motif:PFAM:PF00590
AM286415.1	EMBL	sequence_feature	4313218	4313262	.	+	.	ID=id6941;Note=PS00839 Uroporphyrin-III C-methyltransferase signature 1.;gbkey=misc_feature;gene=cysG;inference=protein motif:Prosite:PS00839
AM286415.1	EMBL	sequence_feature	4313443	4313544	.	+	.	ID=id6942;Note=PS00840 Uroporphyrin-III C-methyltransferase signature 2.;gbkey=misc_feature;gene=cysG;inference=protein motif:Prosite:PS00840
AM286415.1	EMBL	sequence_feature	4313533	4313565	.	+	.	ID=id6943;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=cysG;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4314033	4315073	.	-	.	ID=gene3925;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=YE3969
AM286415.1	EMBL	CDS	4314033	4315073	.	-	0	ID=cds3818;Parent=gene3925;Dbxref=EnsemblGenomes-Gn:YE3969,EnsemblGenomes-Tr:CAL13988,GOA:A1JSB9,InterPro:IPR001412,InterPro:IPR002305,InterPro:IPR002306,InterPro:IPR014729,InterPro:IPR024109,UniProtKB/TrEMBL:A1JSB9,NCBI_GP:CAL13988.1;Name=CAL13988.1;gbkey=CDS;gene=trpS;product=tryptophanyl-tRNA synthetase;protein_id=CAL13988.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4314180	4315037	.	-	.	ID=id6944;Note=Pfam match to entry PF00579 tRNA-synt_1b%2C tRNA synthetases class I (W and Y)%2C score 410.9%2C E-value 7.8e-121;gbkey=misc_feature;gene=trpS;inference=protein motif:PFAM:PF00579
AM286415.1	EMBL	sequence_feature	4314975	4315004	.	-	.	ID=id6945;Note=PS00178 Aminoacyl-transfer RNA synthetases class-I signature.;gbkey=misc_feature;gene=trpS;inference=protein motif:Prosite:PS00178
AM286415.1	EMBL	gene	4315075	4315773	.	-	.	ID=gene3926;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=YE3970
AM286415.1	EMBL	CDS	4315075	4315773	.	-	0	ID=cds3819;Parent=gene3926;Dbxref=EnsemblGenomes-Gn:YE3970,EnsemblGenomes-Tr:CAL13989,GOA:A1JSC8,InterPro:IPR006346,InterPro:IPR006439,InterPro:IPR023198,InterPro:IPR023214,UniProtKB/TrEMBL:A1JSC8,NCBI_GP:CAL13989.1;Name=CAL13989.1;gbkey=CDS;gene=gph;product=phosphoglycolate phosphatase;protein_id=CAL13989.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4315186	4315755	.	-	.	ID=id6946;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 156.8%2C E-value 2.4e-44;gbkey=misc_feature;gene=gph;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	4315766	4316443	.	-	.	ID=gene3927;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=YE3971
AM286415.1	EMBL	CDS	4315766	4316443	.	-	0	ID=cds3820;Parent=gene3927;Dbxref=EnsemblGenomes-Gn:YE3971,EnsemblGenomes-Tr:CAL13990,GOA:A1JSC9,InterPro:IPR000056,InterPro:IPR011060,InterPro:IPR013785,InterPro:IPR026019,UniProtKB/TrEMBL:A1JSC9,NCBI_GP:CAL13990.1;Name=CAL13990.1;gbkey=CDS;gene=rpe;product=ribulose-phosphate 3-epimerase;protein_id=CAL13990.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4315826	4316431	.	-	.	ID=id6947;Note=Pfam match to entry PF00834 Ribul_P_3_epim%2CRibulose-phosphate 3 epimerase family%2C score 473.3%2CE-value 1.3e-139;gbkey=misc_feature;gene=rpe;inference=protein motif:PFAM:PF00834
AM286415.1	EMBL	sequence_feature	4315970	4316038	.	-	.	ID=id6948;Note=PS01086 Ribulose-phosphate 3-epimerase family signature 2.;gbkey=misc_feature;gene=rpe;inference=protein motif:Prosite:PS01086
AM286415.1	EMBL	sequence_feature	4316303	4316347	.	-	.	ID=id6949;Note=PS01085 Ribulose-phosphate 3-epimerase family signature 1.;gbkey=misc_feature;gene=rpe;inference=protein motif:Prosite:PS01085
AM286415.1	EMBL	gene	4316547	4317359	.	-	.	ID=gene3928;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=YE3972
AM286415.1	EMBL	CDS	4316547	4317359	.	-	0	ID=cds3821;Parent=gene3928;Dbxref=EnsemblGenomes-Gn:YE3972,EnsemblGenomes-Tr:CAL13991,GOA:A1JSD0,InterPro:IPR002052,InterPro:IPR012263,InterPro:IPR012327,InterPro:IPR023095,InterPro:IPR029063,UniProtKB/TrEMBL:A1JSD0,NCBI_GP:CAL13991.1;Name=CAL13991.1;gbkey=CDS;gene=dam;product=DNA adenine methylase;protein_id=CAL13991.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4316604	4317332	.	-	.	ID=id6950;Note=Pfam match to entry PF02086 MethyltransfD12%2C D12 class N6 adenine-specific DNA methyltransferase%2C score 346.8%2C E-value 1.6e-101;gbkey=misc_feature;gene=dam;inference=protein motif:PFAM:PF02086
AM286415.1	EMBL	sequence_feature	4316808	4316828	.	-	.	ID=id6951;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;gene=dam;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	4317443	4318438	.	-	.	ID=gene3929;Name=YE3973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3973
AM286415.1	EMBL	CDS	4317443	4318438	.	-	0	ID=cds3822;Parent=gene3929;Dbxref=EnsemblGenomes-Gn:YE3973,EnsemblGenomes-Tr:CAL13992,InterPro:IPR007730,UniProtKB/TrEMBL:A1JSD1,NCBI_GP:CAL13992.1;Name=CAL13992.1;gbkey=CDS;product=conserved hypothetical membrane protein;protein_id=CAL13992.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4318265	4318333	.	-	.	ID=id6952;Note=1 probable transmembrane helix predicted for YE3973 by TMHMM2.0 at aa 36-58;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4318580	4319668	.	-	.	ID=gene3930;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=YE3974
AM286415.1	EMBL	CDS	4318580	4319668	.	-	0	ID=cds3823;Parent=gene3930;Dbxref=EnsemblGenomes-Gn:YE3974,EnsemblGenomes-Tr:CAL13993,GOA:A1JSD3,InterPro:IPR016037,UniProtKB/TrEMBL:A1JSD3,NCBI_GP:CAL13993.1;Name=CAL13993.1;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=CAL13993.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4318595	4319623	.	-	.	ID=id6953;Note=Pfam match to entry PF01761 DHQ_synthase%2C3-dehydroquinate synthase%2C score 680.8%2C E-value 4.3e-202;gbkey=misc_feature;gene=aroB;inference=protein motif:PFAM:PF01761
AM286415.1	EMBL	sequence_feature	4319021	4319068	.	-	.	ID=id6954;Note=PS00012 Phosphopantetheine attachment site.;gbkey=misc_feature;gene=aroB;inference=protein motif:Prosite:PS00012
AM286415.1	EMBL	gene	4319725	4320246	.	-	.	ID=gene3931;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=YE3975
AM286415.1	EMBL	CDS	4319725	4320246	.	-	0	ID=cds3824;Parent=gene3931;Dbxref=EnsemblGenomes-Gn:YE3975,EnsemblGenomes-Tr:CAL13994,GOA:A1JSD4,InterPro:IPR000623,InterPro:IPR023000,InterPro:IPR027417,NCBI_GP:CAL13994.1;Name=CAL13994.1;gbkey=CDS;gene=aroK;product=shikimate kinase I;protein_id=CAL13994.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4319737	4320234	.	-	.	ID=id6955;Note=Pfam match to entry PF01202 SKI%2C Shikimate kinase %2Cscore 303.1%2C E-value 2.2e-88;gbkey=misc_feature;gene=aroK;inference=protein motif:PFAM:PF01202
AM286415.1	EMBL	sequence_feature	4319992	4320069	.	-	.	ID=id6956;Note=PS01128 Shikimate kinase signature.;gbkey=misc_feature;gene=aroK;inference=protein motif:Prosite:PS01128
AM286415.1	EMBL	sequence_feature	4320193	4320216	.	-	.	ID=id6957;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=aroK;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4320594	4321709	.	-	.	ID=gene3932;Name=YE3976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3976
AM286415.1	EMBL	CDS	4320594	4321709	.	-	0	ID=cds3825;Parent=gene3932;Dbxref=EnsemblGenomes-Gn:YE3976,EnsemblGenomes-Tr:CAL13995,GOA:A1JSD5,InterPro:IPR001775,InterPro:IPR004845,InterPro:IPR004846,InterPro:IPR005644,InterPro:IPR011662,InterPro:IPR013355,UniProtKB/TrEMBL:A1JSD5,NCBI_GP:CAL13995.1;Name=CAL13995.1;gbkey=CDS;product=putative membrane transport protein;protein_id=CAL13995.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4320600	4321391	.	-	.	ID=id6958;Note=Pfam match to entry PF00263 GSPII_III%2C Bacterial type II and III secretion system protein%2C score 311.3%2CE-value 7.6e-91;gbkey=misc_feature;inference=protein motif:PFAM:PF00263
AM286415.1	EMBL	sequence_feature	4320666	4320767	.	-	.	ID=id6959;Note=PS00875 Bacterial type II secretion system protein D signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00875
AM286415.1	EMBL	gene	4321949	4322326	.	-	.	ID=gene3933;Name=YE3976A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3976A
AM286415.1	EMBL	CDS	4321949	4322326	.	-	0	ID=cds3826;Parent=gene3933;Dbxref=EnsemblGenomes-Gn:YE3976A,EnsemblGenomes-Tr:CAL13996,InterPro:IPR019684,UniProtKB/TrEMBL:A1JSD6,NCBI_GP:CAL13996.1;Name=CAL13996.1;Note=Similar to Yersinia pestis putative membrane protein ypo0149 SWALL:Q8ZJF9 (EMBL:AJ414141) (122 aa) fasta scores: E(): 4.2e-14%2C 39.42 38d in 104 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414141;product=putative exported protein;protein_id=CAL13996.1;transl_table=11
AM286415.1	EMBL	gene	4322319	4322885	.	-	.	ID=gene3934;Name=YE3977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3977
AM286415.1	EMBL	CDS	4322319	4322885	.	-	0	ID=cds3827;Parent=gene3934;Dbxref=EnsemblGenomes-Gn:YE3977,EnsemblGenomes-Tr:CAL13997,UniProtKB/TrEMBL:A1JSD7,NCBI_GP:CAL13997.1;Name=CAL13997.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL13997.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4322778	4322846	.	-	.	ID=id6960;Note=1 probable transmembrane helix predicted for YE3977 by TMHMM2.0 at aa 15-37;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4322878	4323426	.	-	.	ID=gene3935;Name=YE3977A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3977A
AM286415.1	EMBL	CDS	4322878	4323426	.	-	0	ID=cds3828;Parent=gene3935;Dbxref=EnsemblGenomes-Gn:YE3977A,EnsemblGenomes-Tr:CAL13998,InterPro:IPR007813,UniProtKB/TrEMBL:A1JSD8,NCBI_GP:CAL13998.1;Name=CAL13998.1;Note=Similar to Yersinia pestis putative membrane protein ypo0147 SWALL:Q8ZJG1 (EMBL:AJ414141) (201 aa) fasta scores: E(): 2.4e-32%2C 59.88 38d in 177 aa%2C and to Yersinia pestis KIM hypothetical y3927 SWALL:AAM87471 (EMBL:AE013997) (177 aa) fasta scores: E(): 6.5e-25%2C57.89 38d in 152 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414141;product=Putative membrane protein;protein_id=CAL13998.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4323310	4323369	.	-	.	ID=id6961;Note=1 probable transmembrane helix predicted for YE3977A by TMHMM2.0 at aa 20-39;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4323426	4324343	.	-	.	ID=gene3936;Name=YE3978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3978
AM286415.1	EMBL	CDS	4323426	4324343	.	-	0	ID=cds3829;Parent=gene3936;Dbxref=EnsemblGenomes-Gn:YE3978,EnsemblGenomes-Tr:CAL13999,UniProtKB/TrEMBL:A1JSD9,NCBI_GP:CAL13999.1;Name=CAL13999.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL13999.1;transl_table=11
AM286415.1	EMBL	gene	4324418	4326973	.	+	.	ID=gene3937;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;gene_synonym=b3396,ponA;locus_tag=YE3979
AM286415.1	EMBL	CDS	4324418	4326973	.	+	0	ID=cds3830;Parent=gene3937;Dbxref=EnsemblGenomes-Gn:YE3979,EnsemblGenomes-Tr:CAL14000,GOA:A1JSE0,InterPro:IPR001264,InterPro:IPR001460,InterPro:IPR011816,InterPro:IPR012338,InterPro:IPR012340,InterPro:IPR023346,UniProtKB/TrEMBL:A1JSE0,NCBI_GP:CAL14000.1;Name=CAL14000.1;gbkey=CDS;gene=mrcA;product=penicillin-binding protein;protein_id=CAL14000.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4324436	4324504	.	+	.	ID=id6962;Note=1 probable transmembrane helix predicted for YE3979 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=mrcA;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	4324559	4325065	.	+	.	ID=id6963;Note=Pfam match to entry PF00912 Transglycosyl%2CTransglycosylase%2C score 373.6%2C E-value 1.3e-109;gbkey=misc_feature;gene=mrcA;inference=protein motif:PFAM:PF00912
AM286415.1	EMBL	sequence_feature	4325624	4326766	.	+	.	ID=id6964;Note=Pfam match to entry PF00905 Transpeptidase%2CPenicillin binding protein transpeptidase domain%2C score 25.5%2C E-value 4.7e-12;gbkey=misc_feature;gene=mrcA;inference=protein motif:PFAM:PF00905
AM286415.1	EMBL	gene	4327043	4327600	.	-	.	ID=gene3938;Name=YE3980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3980
AM286415.1	EMBL	CDS	4327043	4327600	.	-	0	ID=cds3831;Parent=gene3938;Dbxref=EnsemblGenomes-Gn:YE3980,EnsemblGenomes-Tr:CAL14001,GOA:A1JSE2,InterPro:IPR000086,InterPro:IPR015797,InterPro:IPR020084,UniProtKB/TrEMBL:A1JSE2,NCBI_GP:CAL14001.1;Name=CAL14001.1;gbkey=CDS;product=putative hydrolase;protein_id=CAL14001.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4327073	4327468	.	-	.	ID=id6965;Note=Pfam match to entry PF00293 NUDIX%2C NUDIX domain %2Cscore 44.3%2C E-value 1.7e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00293
AM286415.1	EMBL	sequence_feature	4327307	4327366	.	-	.	ID=id6966;Note=PS00893 mutT domain signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00893
AM286415.1	EMBL	gene	4328156	4330303	.	+	.	ID=gene3939;Name=YE3982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3982
AM286415.1	EMBL	CDS	4328156	4330303	.	+	0	ID=cds3832;Parent=gene3939;Dbxref=EnsemblGenomes-Gn:YE3982,EnsemblGenomes-Tr:CAL14002,GOA:A1JSE3,InterPro:IPR010771,UniProtKB/TrEMBL:A1JSE3,NCBI_GP:CAL14002.1;Name=CAL14002.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL14002.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4328165	4328233	.	+	.	ID=id6967;Note=5 probable transmembrane helices predicted for YE3982 by TMHMM2.0 at aa 4-26%2C 215-234%2C 238-255%2C 349-371 and 661-683;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4328798	4328857	.	+	.	ID=id6967;Note=5 probable transmembrane helices predicted for YE3982 by TMHMM2.0 at aa 4-26%2C 215-234%2C 238-255%2C 349-371 and 661-683;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4328867	4328920	.	+	.	ID=id6967;Note=5 probable transmembrane helices predicted for YE3982 by TMHMM2.0 at aa 4-26%2C 215-234%2C 238-255%2C 349-371 and 661-683;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4329200	4329268	.	+	.	ID=id6967;Note=5 probable transmembrane helices predicted for YE3982 by TMHMM2.0 at aa 4-26%2C 215-234%2C 238-255%2C 349-371 and 661-683;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4330136	4330204	.	+	.	ID=id6967;Note=5 probable transmembrane helices predicted for YE3982 by TMHMM2.0 at aa 4-26%2C 215-234%2C 238-255%2C 349-371 and 661-683;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	4330551	4331228	.	+	.	ID=gene3940;Name=YE3983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3983
AM286415.1	EMBL	CDS	4330551	4331228	.	+	0	ID=cds3833;Parent=gene3940;Dbxref=EnsemblGenomes-Gn:YE3983,EnsemblGenomes-Tr:CAL14003,GOA:A1JSE4,InterPro:IPR006439,InterPro:IPR023214,UniProtKB/TrEMBL:A1JSE4,NCBI_GP:CAL14003.1;Name=CAL14003.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14003.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4330578	4331135	.	+	.	ID=id6968;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 80.7%2C E-value 2e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	4331265	4331672	.	+	.	ID=gene3941;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=YE3984
AM286415.1	EMBL	CDS	4331265	4331672	.	+	0	ID=cds3834;Parent=gene3941;Dbxref=EnsemblGenomes-Gn:YE3984,EnsemblGenomes-Tr:CAL14004,GOA:A1JSE5,InterPro:IPR002942,InterPro:IPR025708,UniProtKB/TrEMBL:A1JSE5,NCBI_GP:CAL14004.1;Name=CAL14004.1;gbkey=CDS;gene=hslR;product=heat shock protein 15;protein_id=CAL14004.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4331295	4331435	.	+	.	ID=id6969;Note=Pfam match to entry PF01479 S4%2C S4 domain%2C score 51.4%2C E-value 1.3e-12;gbkey=misc_feature;gene=hslR;inference=protein motif:PFAM:PF01479
AM286415.1	EMBL	gene	4331780	4332616	.	+	.	ID=gene3942;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=YE3985
AM286415.1	EMBL	CDS	4331780	4332616	.	+	0	ID=cds3835;Parent=gene3942;Dbxref=EnsemblGenomes-Gn:YE3985,EnsemblGenomes-Tr:CAL14005,GOA:A1JSE6,InterPro:IPR000397,InterPro:IPR016153,InterPro:IPR016154,InterPro:IPR023212,UniProtKB/TrEMBL:A1JSE6,NCBI_GP:CAL14005.1;Name=CAL14005.1;gbkey=CDS;gene=hslO;product=heat-shock chaperonin;protein_id=CAL14005.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4331780	4332577	.	+	.	ID=id6970;Note=Pfam match to entry PF01430 HSP33%2C Hsp33 protein %2Cscore 453.3%2C E-value 1.3e-133;gbkey=misc_feature;gene=hslO;inference=protein motif:PFAM:PF01430
AM286415.1	EMBL	gene	4332816	4334435	.	+	.	ID=gene3943;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;gene_synonym=pck;locus_tag=YE3986
AM286415.1	EMBL	CDS	4332816	4334435	.	+	0	ID=cds3836;Parent=gene3943;Dbxref=EnsemblGenomes-Gn:YE3986,EnsemblGenomes-Tr:CAL14006,GOA:A1JSE7,InterPro:IPR001272,InterPro:IPR008210,InterPro:IPR013035,InterPro:IPR015994,NCBI_GP:CAL14006.1;Name=CAL14006.1;gbkey=CDS;gene=pckA;product=phosphoenolpyruvate carboxykinase [ATP];protein_id=CAL14006.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4332867	4334291	.	+	.	ID=id6971;Note=Pfam match to entry PF01293 PEPCK_ATP%2CPhosphoenolpyruvate carboxykinase%2C score 1217.2%2C E-value 0;gbkey=misc_feature;gene=pckA;inference=protein motif:PFAM:PF01293
AM286415.1	EMBL	sequence_feature	4333554	4333577	.	+	.	ID=id6972;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=pckA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4333605	4333652	.	+	.	ID=id6973;Note=PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature.;gbkey=misc_feature;gene=pckA;inference=protein motif:Prosite:PS00532
AM286415.1	EMBL	gene	4334717	4335475	.	-	.	ID=gene3944;Name=glpR;gbkey=Gene;gene=glpR;gene_biotype=protein_coding;locus_tag=YE3987
AM286415.1	EMBL	CDS	4334717	4335475	.	-	0	ID=cds3837;Parent=gene3944;Dbxref=EnsemblGenomes-Gn:YE3987,EnsemblGenomes-Tr:CAL14007,GOA:A1JSE9,InterPro:IPR001034,InterPro:IPR011991,InterPro:IPR014036,InterPro:IPR018356,UniProtKB/TrEMBL:A1JSE9,NCBI_GP:CAL14007.1;Name=CAL14007.1;gbkey=CDS;gene=glpR;product=glycerol-3-phosphate repressor protein;protein_id=CAL14007.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4334783	4335460	.	-	.	ID=id6974;Note=Pfam match to entry PF00455 deoR%2C Bacterial regulatory proteins%2C deoR family%2C score 380.9%2C E-value 8.2e-112;gbkey=misc_feature;gene=glpR;inference=protein motif:PFAM:PF00455
AM286415.1	EMBL	sequence_feature	4335356	4335460	.	-	.	ID=id6975;Note=PS00894 Bacterial regulatory proteins%2C deoR family signature.;gbkey=misc_feature;gene=glpR;inference=protein motif:Prosite:PS00894
AM286415.1	EMBL	gene	4335511	4336347	.	-	.	ID=gene3945;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=YE3988
AM286415.1	EMBL	CDS	4335511	4336347	.	-	0	ID=cds3838;Parent=gene3945;Dbxref=EnsemblGenomes-Gn:YE3988,EnsemblGenomes-Tr:CAL14008,GOA:A1JSF0,InterPro:IPR002610,InterPro:IPR022732,InterPro:IPR022764,InterPro:IPR023662,NCBI_GP:CAL14008.1;Name=CAL14008.1;gbkey=CDS;gene=glpG;product=probable membrane protein;protein_id=CAL14008.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4335526	4335960	.	-	.	ID=id6976;Note=Pfam match to entry PF01694 Rhomboid%2C Rhomboid family%2C score 128.1%2C E-value 1.1e-35;gbkey=misc_feature;gene=glpG;inference=protein motif:PFAM:PF01694
AM286415.1	EMBL	sequence_feature	4336000	4336068	.	-	.	ID=id6977;Note=6 probable transmembrane helices predicted for YE3988 by TMHMM2.0 at aa 94-116%2C 136-158%2C 170-189%2C193-215%2C 224-241 and 245-267;gbkey=misc_feature;gene=glpG;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4335874	4335942	.	-	.	ID=id6977;Note=6 probable transmembrane helices predicted for YE3988 by TMHMM2.0 at aa 94-116%2C 136-158%2C 170-189%2C193-215%2C 224-241 and 245-267;gbkey=misc_feature;gene=glpG;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4335781	4335840	.	-	.	ID=id6977;Note=6 probable transmembrane helices predicted for YE3988 by TMHMM2.0 at aa 94-116%2C 136-158%2C 170-189%2C193-215%2C 224-241 and 245-267;gbkey=misc_feature;gene=glpG;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4335703	4335771	.	-	.	ID=id6977;Note=6 probable transmembrane helices predicted for YE3988 by TMHMM2.0 at aa 94-116%2C 136-158%2C 170-189%2C193-215%2C 224-241 and 245-267;gbkey=misc_feature;gene=glpG;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4335625	4335678	.	-	.	ID=id6977;Note=6 probable transmembrane helices predicted for YE3988 by TMHMM2.0 at aa 94-116%2C 136-158%2C 170-189%2C193-215%2C 224-241 and 245-267;gbkey=misc_feature;gene=glpG;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4335547	4335615	.	-	.	ID=id6977;Note=6 probable transmembrane helices predicted for YE3988 by TMHMM2.0 at aa 94-116%2C 136-158%2C 170-189%2C193-215%2C 224-241 and 245-267;gbkey=misc_feature;gene=glpG;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	4336417	4336773	.	-	.	ID=gene3946;Name=YE3989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3989
AM286415.1	EMBL	CDS	4336417	4336773	.	-	0	ID=cds3839;Parent=gene3946;Dbxref=EnsemblGenomes-Gn:YE3989,EnsemblGenomes-Tr:CAL14009,GOA:A1JSF1,InterPro:IPR001763,InterPro:IPR023695,UniProtKB/TrEMBL:A1JSF1,NCBI_GP:CAL14009.1;Name=CAL14009.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14009.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4336447	4336722	.	-	.	ID=id6978;Note=Pfam match to entry PF00581 Rhodanese%2CRhodanese-like domain%2C score 64.6%2C E-value 1.3e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00581
AM286415.1	EMBL	gene	4336909	4339620	.	-	.	ID=gene3947;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=YE3990
AM286415.1	EMBL	CDS	4336909	4339620	.	-	0	ID=cds3840;Parent=gene3947;Dbxref=EnsemblGenomes-Gn:YE3990,EnsemblGenomes-Tr:CAL14010,GOA:A1JSF2,InterPro:IPR000792,InterPro:IPR011990,InterPro:IPR011991,InterPro:IPR016032,InterPro:IPR023768,InterPro:IPR027417,NCBI_GP:CAL14010.1;Name=CAL14010.1;gbkey=CDS;gene=malT;product=maltose regulon positive regulatory protein;protein_id=CAL14010.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4336918	4337115	.	-	.	ID=id6979;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 87.9%2C E-value 1.4e-23;gbkey=misc_feature;gene=malT;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	4336981	4337064	.	-	.	ID=id6980;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=malT;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	gene	4339939	4342344	.	+	.	ID=gene3948;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=YE3991
AM286415.1	EMBL	CDS	4339939	4342344	.	+	0	ID=cds3841;Parent=gene3948;Dbxref=EnsemblGenomes-Gn:YE3991,EnsemblGenomes-Tr:CAL14011,GOA:A1JSF4,InterPro:IPR000811,InterPro:IPR011833,UniProtKB/TrEMBL:A1JSF4,NCBI_GP:CAL14011.1;Name=CAL14011.1;gbkey=CDS;gene=malP;product=phosphorylase (ec 2.4.1.1);protein_id=CAL14011.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4340215	4342341	.	+	.	ID=id6981;Note=Pfam match to entry PF00343 phosphorylase%2CCarbohydrate phosphorylase%2C score 1543.8%2C E-value 0;gbkey=misc_feature;gene=malP;inference=protein motif:PFAM:PF00343
AM286415.1	EMBL	sequence_feature	4341865	4341903	.	+	.	ID=id6982;Note=PS00102 Phosphorylase pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=malP;inference=protein motif:Prosite:PS00102
AM286415.1	EMBL	gene	4342357	4344453	.	+	.	ID=gene3949;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=YE3992
AM286415.1	EMBL	CDS	4342357	4344453	.	+	0	ID=cds3842;Parent=gene3949;Dbxref=EnsemblGenomes-Gn:YE3992,EnsemblGenomes-Tr:CAL14012,GOA:A1JSF5,InterPro:IPR003385,InterPro:IPR013781,InterPro:IPR017853,UniProtKB/TrEMBL:A1JSF5,NCBI_GP:CAL14012.1;Name=CAL14012.1;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=CAL14012.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4342807	4344423	.	+	.	ID=id6983;Note=Pfam match to entry PF02446 4A_glucanotrans%2C4-alpha-glucanotransferase%2C score 745.3%2C E-value 1.7e-221;gbkey=misc_feature;gene=malQ;inference=protein motif:PFAM:PF02446
AM286415.1	EMBL	gene	4344796	4345371	.	-	.	ID=gene3950;Name=YE3993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3993
AM286415.1	EMBL	CDS	4344796	4345371	.	-	0	ID=cds3843;Parent=gene3950;Dbxref=EnsemblGenomes-Gn:YE3993,EnsemblGenomes-Tr:CAL14013,GOA:A1JSF6,InterPro:IPR000361,InterPro:IPR001075,InterPro:IPR017726,NCBI_GP:CAL14013.1;Name=CAL14013.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14013.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4344832	4345041	.	-	.	ID=id6984;Note=Pfam match to entry PF01106 NifU-like%2C NifU-like domain%2C score 25.1%2C E-value 7.1e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF01106
AM286415.1	EMBL	sequence_feature	4344925	4344957	.	-	.	ID=id6985;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4345051	4345371	.	-	.	ID=id6986;Note=Pfam match to entry PF01521 HesB-like%2C HesB-like domain%2C score 123.5%2C E-value 2.6e-34;gbkey=misc_feature;inference=protein motif:PFAM:PF01521
AM286415.1	EMBL	gene	4345431	4346114	.	-	.	ID=gene3951;Name=YE3994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3994
AM286415.1	EMBL	CDS	4345431	4346114	.	-	0	ID=cds3844;Parent=gene3951;Dbxref=EnsemblGenomes-Gn:YE3994,EnsemblGenomes-Tr:CAL14014,GOA:A1JSF7,InterPro:IPR000836,InterPro:IPR029057,UniProtKB/TrEMBL:A1JSF7,NCBI_GP:CAL14014.1;Name=CAL14014.1;Note=Similar to Haemophilus influenzae competence protein F comF or hi0434 SWALL:COMF_HAEIN (SWALL:P31773) (229 aa) fasta scores: E(): 6.5e-27%2C 39.81 38d in 221 aa%2Cand to Yersinia pestis hypothetical protein Ypo0128 ypo0128 SWALL:Q8ZJH9 (EMBL:AJ414141) (233 aa) fasta scores: E(): 7.8e-69%2C 74.24 38d in 233 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P31773;product=Putative competence-related protein F;protein_id=CAL14014.1;transl_table=11
AM286415.1	EMBL	gene	4346346	4347122	.	+	.	ID=gene3952;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=YE3995
AM286415.1	EMBL	CDS	4346346	4347122	.	+	0	ID=cds3845;Parent=gene3952;Dbxref=EnsemblGenomes-Gn:YE3995,EnsemblGenomes-Tr:CAL14015,GOA:A1JSF8,InterPro:IPR010076,InterPro:IPR029058,NCBI_GP:CAL14015.1;Name=CAL14015.1;gbkey=CDS;gene=bioH;product=putative biotin biosynthesis protein;protein_id=CAL14015.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4346463	4347104	.	+	.	ID=id6987;Note=Pfam match to entry PF00561 abhydrolase%2C alpha/beta hydrolase fold%2C score 132.0%2C E-value 7.3e-37;gbkey=misc_feature;gene=bioH;inference=protein motif:PFAM:PF00561
AM286415.1	EMBL	gene	4347237	4347500	.	+	.	ID=gene3953;Name=YE3996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3996
AM286415.1	EMBL	CDS	4347237	4347500	.	+	0	ID=cds3846;Parent=gene3953;Dbxref=EnsemblGenomes-Gn:YE3996,EnsemblGenomes-Tr:CAL14016,InterPro:IPR010854,InterPro:IPR025543,UniProtKB/TrEMBL:A1JSG0,NCBI_GP:CAL14016.1;Name=CAL14016.1;gbkey=CDS;product=putative exported protein;protein_id=CAL14016.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4347267	4347296	.	+	.	ID=id6988;Note=PS00120 Lipases%2C serine active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00120
AM286415.1	EMBL	gene	4347538	4347786	.	-	.	ID=gene3954;Name=YE3997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE3997
AM286415.1	EMBL	CDS	4347538	4347786	.	-	0	ID=cds3847;Parent=gene3954;Dbxref=EnsemblGenomes-Gn:YE3997,EnsemblGenomes-Tr:CAL14017,GOA:A1JSG1,InterPro:IPR015102,InterPro:IPR023732,NCBI_GP:CAL14017.1;Name=CAL14017.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14017.1;transl_table=11
AM286415.1	EMBL	gene	4347800	4350115	.	-	.	ID=gene3955;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=YE3998
AM286415.1	EMBL	CDS	4347800	4350115	.	-	0	ID=cds3848;Parent=gene3955;Dbxref=EnsemblGenomes-Gn:YE3998,EnsemblGenomes-Tr:CAL14018,GOA:A1JSG2,InterPro:IPR003373,InterPro:IPR011619,InterPro:IPR011640,InterPro:IPR011642,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSG2,NCBI_GP:CAL14018.1;Name=CAL14018.1;gbkey=CDS;gene=feoB;product=ferrous iron transport protein B;protein_id=CAL14018.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4349216	4349284	.	-	.	ID=id6989;Note=10 probable transmembrane helices predicted for YE3998 by TMHMM2.0 at aa 278-300%2C 310-332%2C 345-367%2C387-409%2C 422-444%2C 454-476%2C 511-533%2C 663-685%2C 692-714 and 724-743;gbkey=misc_feature;gene=feoB;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4349120	4349188	.	-	.	ID=id6989;Note=10 probable transmembrane helices predicted for YE3998 by TMHMM2.0 at aa 278-300%2C 310-332%2C 345-367%2C387-409%2C 422-444%2C 454-476%2C 511-533%2C 663-685%2C 692-714 and 724-743;gbkey=misc_feature;gene=feoB;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4349015	4349083	.	-	.	ID=id6989;Note=10 probable transmembrane helices predicted for YE3998 by TMHMM2.0 at aa 278-300%2C 310-332%2C 345-367%2C387-409%2C 422-444%2C 454-476%2C 511-533%2C 663-685%2C 692-714 and 724-743;gbkey=misc_feature;gene=feoB;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4348889	4348957	.	-	.	ID=id6989;Note=10 probable transmembrane helices predicted for YE3998 by TMHMM2.0 at aa 278-300%2C 310-332%2C 345-367%2C387-409%2C 422-444%2C 454-476%2C 511-533%2C 663-685%2C 692-714 and 724-743;gbkey=misc_feature;gene=feoB;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4348784	4348852	.	-	.	ID=id6989;Note=10 probable transmembrane helices predicted for YE3998 by TMHMM2.0 at aa 278-300%2C 310-332%2C 345-367%2C387-409%2C 422-444%2C 454-476%2C 511-533%2C 663-685%2C 692-714 and 724-743;gbkey=misc_feature;gene=feoB;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4348688	4348756	.	-	.	ID=id6989;Note=10 probable transmembrane helices predicted for YE3998 by TMHMM2.0 at aa 278-300%2C 310-332%2C 345-367%2C387-409%2C 422-444%2C 454-476%2C 511-533%2C 663-685%2C 692-714 and 724-743;gbkey=misc_feature;gene=feoB;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4348517	4348585	.	-	.	ID=id6989;Note=10 probable transmembrane helices predicted for YE3998 by TMHMM2.0 at aa 278-300%2C 310-332%2C 345-367%2C387-409%2C 422-444%2C 454-476%2C 511-533%2C 663-685%2C 692-714 and 724-743;gbkey=misc_feature;gene=feoB;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4348061	4348129	.	-	.	ID=id6989;Note=10 probable transmembrane helices predicted for YE3998 by TMHMM2.0 at aa 278-300%2C 310-332%2C 345-367%2C387-409%2C 422-444%2C 454-476%2C 511-533%2C 663-685%2C 692-714 and 724-743;gbkey=misc_feature;gene=feoB;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4347974	4348042	.	-	.	ID=id6989;Note=10 probable transmembrane helices predicted for YE3998 by TMHMM2.0 at aa 278-300%2C 310-332%2C 345-367%2C387-409%2C 422-444%2C 454-476%2C 511-533%2C 663-685%2C 692-714 and 724-743;gbkey=misc_feature;gene=feoB;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4347887	4347946	.	-	.	ID=id6989;Note=10 probable transmembrane helices predicted for YE3998 by TMHMM2.0 at aa 278-300%2C 310-332%2C 345-367%2C387-409%2C 422-444%2C 454-476%2C 511-533%2C 663-685%2C 692-714 and 724-743;gbkey=misc_feature;gene=feoB;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	4347968	4350094	.	-	.	ID=id6990;Note=Pfam match to entry PF02421 FeoB%2C Ferrous iron transport protein B%2C score 1241.9%2C E-value 0;gbkey=misc_feature;gene=feoB;inference=protein motif:PFAM:PF02421
AM286415.1	EMBL	sequence_feature	4348904	4348936	.	-	.	ID=id6991;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=feoB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4348934	4348957	.	-	.	ID=id6992;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=feoB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4350065	4350088	.	-	.	ID=id6993;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=feoB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4350209	4350433	.	-	.	ID=gene3956;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=YE3999
AM286415.1	EMBL	CDS	4350209	4350433	.	-	0	ID=cds3849;Parent=gene3956;Dbxref=EnsemblGenomes-Gn:YE3999,EnsemblGenomes-Tr:CAL14019,GOA:A1JSG4,InterPro:IPR007167,InterPro:IPR008988,UniProtKB/TrEMBL:A1JSG4,NCBI_GP:CAL14019.1;Name=CAL14019.1;gbkey=CDS;gene=feoA;product=hypothetical ferrous iron transport protein A;protein_id=CAL14019.1;transl_table=11
AM286415.1	EMBL	gene	4351068	4353452	.	-	.	ID=gene3957;Name=teX;gbkey=Gene;gene=teX;gene_biotype=protein_coding;locus_tag=YE4000
AM286415.1	EMBL	CDS	4351068	4353452	.	-	0	ID=cds3850;Parent=gene3957;Dbxref=EnsemblGenomes-Gn:YE4000,EnsemblGenomes-Tr:CAL14020,GOA:A1JSG5,InterPro:IPR003029,InterPro:IPR003583,InterPro:IPR006641,InterPro:IPR010994,InterPro:IPR012337,InterPro:IPR012340,InterPro:IPR018974,InterPro:IPR022967,InterPro:IPR023097,InterPro:IPR023319,InterPro:IPR023323,UniProtKB/TrEMBL:A1JSG5,NCBI_GP:CAL14020.1;Name=CAL14020.1;Note=Highly similar to Bordetella pertussis Tex protein SWALL:TEX_BORPE (SWALL:Q45388) (791 aa) fasta scores: E(): 4.3e-161%2C 59.32 38d in 767 aa%2C and to Escherichia coli protein YhgF or b3407 SWALL:YHGF_ECOLI (SWALL:P46837) (773 aa) fasta scores: E(): 0%2C 81.86 38d in 794 aa;gbkey=CDS;gene=teX;inference=similar to sequence:UniProtKB:Q45388;product=putative transcription accessory protein;protein_id=CAL14020.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4351296	4351517	.	-	.	ID=id6994;Note=Pfam match to entry PF00575 S1%2C S1 RNA binding domain%2C score 101.7%2C E-value 9.5e-28;gbkey=misc_feature;gene=teX;inference=protein motif:PFAM:PF00575
AM286415.1	EMBL	gene	4353492	4354109	.	-	.	ID=gene3958;Name=YE4001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4001
AM286415.1	EMBL	CDS	4353492	4354109	.	-	0	ID=cds3851;Parent=gene3958;Dbxref=EnsemblGenomes-Gn:YE4001,EnsemblGenomes-Tr:CAL14021,InterPro:IPR016196,UniProtKB/TrEMBL:A1JSG6,NCBI_GP:CAL14021.1;Name=CAL14021.1;Note=Similar to Sulfolobus tokodaii hypothetical protein St2409 st2409 SWALL:Q96XV9 (EMBL:AP000990) (375 aa) fasta scores: E(): 2.7e-05%2C 22.59 38d in 177 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP000990;product=putative MFS-family transport protein;protein_id=CAL14021.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4353963	4354031	.	-	.	ID=id6995;Note=6 probable transmembrane helices predicted for YE4001 by TMHMM2.0 at aa 28-50%2C 60-82%2C 89-108%2C 112-131%2C144-166 and 181-198;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4353867	4353935	.	-	.	ID=id6995;Note=6 probable transmembrane helices predicted for YE4001 by TMHMM2.0 at aa 28-50%2C 60-82%2C 89-108%2C 112-131%2C144-166 and 181-198;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4353789	4353848	.	-	.	ID=id6995;Note=6 probable transmembrane helices predicted for YE4001 by TMHMM2.0 at aa 28-50%2C 60-82%2C 89-108%2C 112-131%2C144-166 and 181-198;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4353720	4353779	.	-	.	ID=id6995;Note=6 probable transmembrane helices predicted for YE4001 by TMHMM2.0 at aa 28-50%2C 60-82%2C 89-108%2C 112-131%2C144-166 and 181-198;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4353615	4353683	.	-	.	ID=id6995;Note=6 probable transmembrane helices predicted for YE4001 by TMHMM2.0 at aa 28-50%2C 60-82%2C 89-108%2C 112-131%2C144-166 and 181-198;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4353519	4353572	.	-	.	ID=id6995;Note=6 probable transmembrane helices predicted for YE4001 by TMHMM2.0 at aa 28-50%2C 60-82%2C 89-108%2C 112-131%2C144-166 and 181-198;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	4354121	4354702	.	-	.	ID=gene3959;Name=YE4002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4002
AM286415.1	EMBL	CDS	4354121	4354702	.	-	0	ID=cds3852;Parent=gene3959;Dbxref=EnsemblGenomes-Gn:YE4002,EnsemblGenomes-Tr:CAL14022,UniProtKB/TrEMBL:A1JSG8,NCBI_GP:CAL14022.1;Name=CAL14022.1;Note=no significant database matches;gbkey=CDS;product=Hypothetical protein;protein_id=CAL14022.1;transl_table=11
AM286415.1	EMBL	gene	4355133	4355630	.	+	.	ID=gene3960;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=YE4003
AM286415.1	EMBL	CDS	4355133	4355630	.	+	0	ID=cds3853;Parent=gene3960;Dbxref=EnsemblGenomes-Gn:YE4003,EnsemblGenomes-Tr:CAL14023,GOA:A1JSG9,InterPro:IPR001437,InterPro:IPR006358,InterPro:IPR018151,InterPro:IPR022691,InterPro:IPR023459,InterPro:IPR028624,UniProtKB/TrEMBL:A1JSG9,NCBI_GP:CAL14023.1;Name=CAL14023.1;gbkey=CDS;gene=greB;product=transcription elongation factor;protein_id=CAL14023.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4355136	4355357	.	+	.	ID=id6996;Note=Pfam match to entry PF03449 GreA_GreB_N%2CProkaryotic transcription elongation factor%2C GreA/GreB%2CN-terminal domain%2C score 143.6%2C E-value 2.3e-40;gbkey=misc_feature;gene=greB;inference=protein motif:PFAM:PF03449
AM286415.1	EMBL	sequence_feature	4355154	4355279	.	+	.	ID=id6997;Note=PS00829 Prokaryotic transcription elongation factors signature 1.;gbkey=misc_feature;gene=greB;inference=protein motif:Prosite:PS00829
AM286415.1	EMBL	sequence_feature	4355373	4355600	.	+	.	ID=id6998;Note=Pfam match to entry PF01272 GreA_GreB%2C Prokaryotic transcription elongation factor%2C GreA/GreB%2C C-terminal domain%2C score 130.1%2C E-value 2.7e-36;gbkey=misc_feature;gene=greB;inference=protein motif:PFAM:PF01272
AM286415.1	EMBL	sequence_feature	4355490	4355540	.	+	.	ID=id6999;Note=PS00830 Prokaryotic transcription elongation factors signature 2.;gbkey=misc_feature;gene=greB;inference=protein motif:Prosite:PS00830
AM286415.1	EMBL	gene	4355751	4356470	.	+	.	ID=gene3961;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;gene_synonym=kmt,ompB;locus_tag=YE4004
AM286415.1	EMBL	CDS	4355751	4356470	.	+	0	ID=cds3854;Parent=gene3961;Dbxref=EnsemblGenomes-Gn:YE4004,EnsemblGenomes-Tr:CAL14024,GOA:A1JSH8,InterPro:IPR001789,InterPro:IPR001867,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JSH8,NCBI_GP:CAL14024.1;Name=CAL14024.1;gbkey=CDS;gene=ompR;product=transcriptional regulatory protein;protein_id=CAL14024.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4355763	4356122	.	+	.	ID=id7000;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 155.7%2C E-value 5.2e-44;gbkey=misc_feature;gene=ompR;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	4356219	4356437	.	+	.	ID=id7001;Note=Pfam match to entry PF00486 trans_reg_C%2CTranscriptional regulatory protein%2C C terminal%2C score 128.7%2C E-value 6.8e-36;gbkey=misc_feature;gene=ompR;inference=protein motif:PFAM:PF00486
AM286415.1	EMBL	gene	4356467	4357819	.	+	.	ID=gene3962;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB,perA,tpo;locus_tag=YE4005
AM286415.1	EMBL	CDS	4356467	4357819	.	+	0	ID=cds3855;Parent=gene3962;Dbxref=EnsemblGenomes-Gn:YE4005,EnsemblGenomes-Tr:CAL14025,GOA:A1JSI0,InterPro:IPR003594,InterPro:IPR003660,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB/TrEMBL:A1JSI0,NCBI_GP:CAL14025.1;Name=CAL14025.1;gbkey=CDS;gene=envZ;product=osmolarity sensor protein;protein_id=CAL14025.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4356500	4356568	.	+	.	ID=id7002;Note=1 probable transmembrane helix predicted for YE4005 by TMHMM2.0 at aa 12-34;gbkey=misc_feature;gene=envZ;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	4356503	4356550	.	+	.	ID=id7003;Note=PS00038 Myc-type%2C 'helix-loop-helix' dimerization domain signature.;gbkey=misc_feature;gene=envZ;inference=protein motif:Prosite:PS00038
AM286415.1	EMBL	sequence_feature	4356944	4357153	.	+	.	ID=id7004;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 44.8%2C E-value 1.3e-10;gbkey=misc_feature;gene=envZ;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	4357163	4357345	.	+	.	ID=id7005;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 54.1%2C E-value 2e-13;gbkey=misc_feature;gene=envZ;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	4357460	4357783	.	+	.	ID=id7006;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 123.1%2C E-value 3.4e-34;gbkey=misc_feature;gene=envZ;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	4358593	4360107	.	+	.	ID=gene3963;Name=glyD;gbkey=Gene;gene=glyD;gene_biotype=protein_coding;locus_tag=YE4008
AM286415.1	EMBL	CDS	4358593	4360107	.	+	0	ID=cds3856;Parent=gene3963;Dbxref=EnsemblGenomes-Gn:YE4008,EnsemblGenomes-Tr:CAL14026,GOA:A1JSI2,InterPro:IPR000447,InterPro:IPR006076,UniProtKB/TrEMBL:A1JSI2,NCBI_GP:CAL14026.1;Name=CAL14026.1;gbkey=CDS;gene=glyD;product=aerobic glycerol-3-phosphate dehydrogenase;protein_id=CAL14026.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4358701	4359690	.	+	.	ID=id7007;Note=Pfam match to entry PF01266 DAO%2C FAD dependent oxidoreductase%2C score 350.6%2C E-value 1.1e-102;gbkey=misc_feature;gene=glyD;inference=protein motif:PFAM:PF01266
AM286415.1	EMBL	sequence_feature	4359646	4359678	.	+	.	ID=id7008;Note=PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2.;gbkey=misc_feature;gene=glyD;inference=protein motif:Prosite:PS00978
AM286415.1	EMBL	gene	4360202	4362649	.	-	.	ID=gene3964;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;gene_synonym=glgY;locus_tag=YE4009
AM286415.1	EMBL	CDS	4360202	4362649	.	-	0	ID=cds3857;Parent=gene3964;Dbxref=EnsemblGenomes-Gn:YE4009,EnsemblGenomes-Tr:CAL14027,GOA:A1JSI4,InterPro:IPR000811,InterPro:IPR011833,UniProtKB/TrEMBL:A1JSI4,NCBI_GP:CAL14027.1;Name=CAL14027.1;gbkey=CDS;gene=glgP;product=glycogen phosphorylase;protein_id=CAL14027.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4360214	4362349	.	-	.	ID=id7009;Note=Pfam match to entry PF00343 phosphorylase%2CCarbohydrate phosphorylase%2C score 1759.6%2C E-value 0;gbkey=misc_feature;gene=glgP;inference=protein motif:PFAM:PF00343
AM286415.1	EMBL	sequence_feature	4360652	4360690	.	-	.	ID=id7010;Note=PS00102 Phosphorylase pyridoxal-phosphate attachment site.;gbkey=misc_feature;gene=glgP;inference=protein motif:Prosite:PS00102
AM286415.1	EMBL	gene	4362695	4364125	.	-	.	ID=gene3965;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=YE4010
AM286415.1	EMBL	CDS	4362695	4364125	.	-	0	ID=cds3858;Parent=gene3965;Dbxref=EnsemblGenomes-Gn:YE4010,EnsemblGenomes-Tr:CAL14028,GOA:A1JSI5,InterPro:IPR001296,InterPro:IPR011835,InterPro:IPR013534,NCBI_GP:CAL14028.1;Name=CAL14028.1;gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=CAL14028.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4362761	4363291	.	-	.	ID=id7011;Note=Pfam match to entry PF00534 Glycos_transf_1%2CGlycosyl transferases group 1%2C score 41.6%2C E-value 1.2e-09;gbkey=misc_feature;gene=glgA;inference=protein motif:PFAM:PF00534
AM286415.1	EMBL	sequence_feature	4363634	4363681	.	-	.	ID=id7012;Note=PS00589 PTS HPR component serine phosphorylation site signature.;gbkey=misc_feature;gene=glgA;inference=protein motif:Prosite:PS00589
AM286415.1	EMBL	gene	4364303	4365589	.	-	.	ID=gene3966;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=YE4011
AM286415.1	EMBL	CDS	4364303	4365589	.	-	0	ID=cds3859;Parent=gene3966;Dbxref=EnsemblGenomes-Gn:YE4011,EnsemblGenomes-Tr:CAL14029,GOA:A1JSI6,InterPro:IPR005835,InterPro:IPR005836,InterPro:IPR011004,InterPro:IPR011831,InterPro:IPR023049,InterPro:IPR029044,UniProtKB/TrEMBL:A1JSI6,NCBI_GP:CAL14029.1;Name=CAL14029.1;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=CAL14029.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4364576	4364608	.	-	.	ID=id7013;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=glgC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4364711	4365529	.	-	.	ID=id7014;Note=Pfam match to entry PF00483 NTP_transferase%2CNucleotidyl transferase%2C score 316.7%2C E-value 1.8e-92;gbkey=misc_feature;gene=glgC;inference=protein motif:PFAM:PF00483
AM286415.1	EMBL	sequence_feature	4364927	4364959	.	-	.	ID=id7015;Note=PS00810 ADP-glucose pyrophosphorylase signature 3.;gbkey=misc_feature;gene=glgC;inference=protein motif:Prosite:PS00810
AM286415.1	EMBL	sequence_feature	4365227	4365253	.	-	.	ID=id7016;Note=PS00809 ADP-glucose pyrophosphorylase signature 2.;gbkey=misc_feature;gene=glgC;inference=protein motif:Prosite:PS00809
AM286415.1	EMBL	sequence_feature	4365455	4365514	.	-	.	ID=id7017;Note=PS00808 ADP-glucose pyrophosphorylase signature 1.;gbkey=misc_feature;gene=glgC;inference=protein motif:Prosite:PS00808
AM286415.1	EMBL	gene	4365599	4367587	.	-	.	ID=gene3967;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=YE4012
AM286415.1	EMBL	CDS	4365599	4367587	.	-	0	ID=cds3860;Parent=gene3967;Dbxref=EnsemblGenomes-Gn:YE4012,EnsemblGenomes-Tr:CAL14030,GOA:A1JSI8,InterPro:IPR004193,InterPro:IPR006047,InterPro:IPR011837,InterPro:IPR013781,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR015902,InterPro:IPR017853,InterPro:IPR022844,NCBI_GP:CAL14030.1;Name=CAL14030.1;gbkey=CDS;gene=glgX;product=putative alpha-amylase;protein_id=CAL14030.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4365908	4367200	.	-	.	ID=id7018;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C catalytic domain%2C score 7.4%2C E-value 1.9e-11;gbkey=misc_feature;gene=glgX;inference=protein motif:PFAM:PF00128
AM286415.1	EMBL	sequence_feature	4366934	4366987	.	-	.	ID=id7019;Note=PS00062 Aldo/keto reductase family signature 2.;gbkey=misc_feature;gene=glgX;inference=protein motif:Prosite:PS00062
AM286415.1	EMBL	sequence_feature	4367276	4367563	.	-	.	ID=id7020;Note=Pfam match to entry PF02922 isoamylase_N%2CIsoamylase N-terminal domain%2C score 124.4%2C E-value 1.4e-34;gbkey=misc_feature;gene=glgX;inference=protein motif:PFAM:PF02922
AM286415.1	EMBL	gene	4367589	4369772	.	-	.	ID=gene3968;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=YE4013
AM286415.1	EMBL	CDS	4367589	4369772	.	-	0	ID=cds3861;Parent=gene3968;Dbxref=EnsemblGenomes-Gn:YE4013,EnsemblGenomes-Tr:CAL14031,GOA:A1JSJ0,InterPro:IPR004193,InterPro:IPR006047,InterPro:IPR006048,InterPro:IPR006407,InterPro:IPR013780,InterPro:IPR013781,InterPro:IPR013783,InterPro:IPR014756,InterPro:IPR015902,InterPro:IPR017853,NCBI_GP:CAL14031.1;Name=CAL14031.1;gbkey=CDS;gene=glgB;product=1%2C4-alpha-glucan branching enzyme;protein_id=CAL14031.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4368012	4369037	.	-	.	ID=id7021;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C catalytic domain%2C score -19.1%2C E-value 9.6e-10;gbkey=misc_feature;gene=glgB;inference=protein motif:PFAM:PF00128
AM286415.1	EMBL	sequence_feature	4369131	4369409	.	-	.	ID=id7022;Note=Pfam match to entry PF02922 isoamylase_N%2CIsoamylase N-terminal domain%2C score 133.6%2C E-value 2.3e-37;gbkey=misc_feature;gene=glgB;inference=protein motif:PFAM:PF02922
AM286415.1	EMBL	gene	4370269	4371966	.	+	.	ID=gene3969;Name=YE4014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4014
AM286415.1	EMBL	CDS	4370269	4371966	.	+	0	ID=cds3862;Parent=gene3969;Dbxref=EnsemblGenomes-Gn:YE4014,EnsemblGenomes-Tr:CAL14032,GOA:A1JSJ1,InterPro:IPR003018,InterPro:IPR003594,InterPro:IPR010559,InterPro:IPR011620,InterPro:IPR029016,UniProtKB/TrEMBL:A1JSJ1,NCBI_GP:CAL14032.1;Name=CAL14032.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL14032.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4370287	4370346	.	+	.	ID=id7023;Note=6 probable transmembrane helices predicted for YE4014 by TMHMM2.0 at aa 7-26%2C 46-65%2C 77-99%2C 109-131%2C138-160 and 175-197;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4370404	4370463	.	+	.	ID=id7023;Note=6 probable transmembrane helices predicted for YE4014 by TMHMM2.0 at aa 7-26%2C 46-65%2C 77-99%2C 109-131%2C138-160 and 175-197;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4370497	4370565	.	+	.	ID=id7023;Note=6 probable transmembrane helices predicted for YE4014 by TMHMM2.0 at aa 7-26%2C 46-65%2C 77-99%2C 109-131%2C138-160 and 175-197;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4370593	4370661	.	+	.	ID=id7023;Note=6 probable transmembrane helices predicted for YE4014 by TMHMM2.0 at aa 7-26%2C 46-65%2C 77-99%2C 109-131%2C138-160 and 175-197;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4370680	4370748	.	+	.	ID=id7023;Note=6 probable transmembrane helices predicted for YE4014 by TMHMM2.0 at aa 7-26%2C 46-65%2C 77-99%2C 109-131%2C138-160 and 175-197;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4370791	4370859	.	+	.	ID=id7023;Note=6 probable transmembrane helices predicted for YE4014 by TMHMM2.0 at aa 7-26%2C 46-65%2C 77-99%2C 109-131%2C138-160 and 175-197;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	4370572	4370604	.	+	.	ID=id7024;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4371649	4371948	.	+	.	ID=id7025;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 27.8%2C E-value 1.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	4371963	4372859	.	-	.	ID=gene3970;Name=budR;gbkey=Gene;gene=budR;gene_biotype=protein_coding;locus_tag=YE4015
AM286415.1	EMBL	CDS	4371963	4372859	.	-	0	ID=cds3863;Parent=gene3970;Dbxref=EnsemblGenomes-Gn:YE4015,EnsemblGenomes-Tr:CAL14033,GOA:A1JSJ3,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JSJ3,NCBI_GP:CAL14033.1;Name=CAL14033.1;Note=Similar to Klebsiella terrigena bud operon%2C2%2C3-butanediol synthesis%2C transcriptional regulator budR SWALL:BUDR_KLETE (SWALL:P52666) (290 aa) fasta scores: E(): 5.6e-56%2C 53.35 38d in 283 aa%2C and to Salmonella typhimurium putative transcriptional regulator stmr or stm3121 SWALL:Q9RQ20 (EMBL:AF134978) (292 aa) fasta scores: E(): 1.5e-44%2C 42.95 38d in 291 aa. Note this could be a partner to YE4014 potential two-component histidine kinase%3B Possible regulator of budA and budB;gbkey=CDS;gene=budR;inference=similar to sequence:UniProtKB:P52666;product=Putative transcriptional regulator;protein_id=CAL14033.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4371975	4372604	.	-	.	ID=id7026;Note=Pfam match to entry PF03466 LysR_substrate E-value 9.60e-42;gbkey=misc_feature;gene=budR;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	4372674	4372853	.	-	.	ID=id7027;Note=Pfam match to entry PF00126 HTH_1 E-value 5.60e-30;gbkey=misc_feature;gene=budR;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	gene	4372967	4373752	.	+	.	ID=gene3971;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=YE4016
AM286415.1	EMBL	CDS	4372967	4373752	.	+	0	ID=cds3864;Parent=gene3971;Dbxref=EnsemblGenomes-Gn:YE4016,EnsemblGenomes-Tr:CAL14034,GOA:A1JSJ4,InterPro:IPR005128,UniProtKB/TrEMBL:A1JSJ4,NCBI_GP:CAL14034.1;Name=CAL14034.1;Note=Similar to Enterobacter aerogenes alpha-acetolactate decarboxylase%2C involved in 2%2C3-butanediol synthesis%2C BudA or aldC SWALL:ALDC_ENTAE (SWALL:P05361) (260 aa) fasta scores: E(): 9.9e-66%2C 60.15 id in 256 aa%2C and to Bacillus subtilis alpha-acetolactate decarboxylase alsD SWALL:ALDC_BACSU (SWALL:Q04777) (255 aa) fasta scores: E(): 4.3e-41%2C 45.37 38d in 238 aa%2C and to Lactococcus lactis alpha-acetolactate decarboxylase aldb or ll1228 SWALL:ALDC_LACLA (SWALL:P95676) (236 aa) fasta scores: E(): 8.8e-26%2C 34.19 38d in 231 aa;gbkey=CDS;gene=budA;inference=similar to sequence:UniProtKB:Q04777;product=alpha-acetolactate decarboxylase;protein_id=CAL14034.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4373027	4373719	.	+	.	ID=id7028;Note=Pfam match to entry PF03306 AAL_decarboxy%2CAlpha-acetolactate decarboxylase%2C score 432.8%2C E-value 2e-127;gbkey=misc_feature;gene=budA;inference=protein motif:PFAM:PF03306
AM286415.1	EMBL	gene	4373792	4375471	.	+	.	ID=gene3972;Name=budB;gbkey=Gene;gene=budB;gene_biotype=protein_coding;locus_tag=YE4017
AM286415.1	EMBL	CDS	4373792	4375471	.	+	0	ID=cds3865;Parent=gene3972;Dbxref=EnsemblGenomes-Gn:YE4017,EnsemblGenomes-Tr:CAL14035,GOA:A1JSJ5,InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR012782,InterPro:IPR029035,InterPro:IPR029061,UniProtKB/TrEMBL:A1JSJ5,NCBI_GP:CAL14035.1;Name=CAL14035.1;Note=Similar to Klebsiella pneumoniae acetolactate synthase%2C catabolic%2C involved in 2%2C3-butanediol synthesis%2C BudB or ilvK SWALL:ILVB_KLEPN (SWALL:P27696) (559 aa) fasta scores: E(): 2.2e-152%2C 71.27 38d in 550 aa%2Cand to Bacillus subtilis acetolactate synthase alsS SWALL:ILVX_BACSU (SWALL:Q04789) (571 aa) fasta scores: E(): 5.7e-102%2C 50.82 38d in 549 aa%2C and to Lactococcus lactis alpha-acetolactate synthase als or ll1184 SWALL:Q48634 (EMBL:L16975) (554 aa) fasta scores: E(): 1.2e-92%2C 48.35 38d in 546 aa;gbkey=CDS;gene=budB;inference=similar to sequence:UniProtKB:Q04789;product=acetolactate synthase%2C catabolic;protein_id=CAL14035.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4373816	4374331	.	+	.	ID=id7029;Note=Pfam match to entry PF02776 TPP_enzymes_N%2C Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain %2Cscore 250.4%2C E-value 1.6e-72;gbkey=misc_feature;gene=budB;inference=protein motif:PFAM:PF02776
AM286415.1	EMBL	sequence_feature	4374374	4374856	.	+	.	ID=id7030;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzyme%2C central domain%2C score 154.0%2CE-value 1.7e-43;gbkey=misc_feature;gene=budB;inference=protein motif:PFAM:PF00205
AM286415.1	EMBL	sequence_feature	4374890	4375408	.	+	.	ID=id7031;Note=Pfam match to entry PF02775 TPP_enzymes_C%2C Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain %2Cscore 219.8%2C E-value 2.6e-63;gbkey=misc_feature;gene=budB;inference=protein motif:PFAM:PF02775
AM286415.1	EMBL	sequence_feature	4375079	4375138	.	+	.	ID=id7032;Note=PS00187 Thiamine pyrophosphate enzymes signature.;gbkey=misc_feature;gene=budB;inference=protein motif:Prosite:PS00187
AM286415.1	EMBL	gene	4375896	4376999	.	-	.	ID=gene3973;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=YE4018
AM286415.1	EMBL	CDS	4375896	4376999	.	-	0	ID=cds3866;Parent=gene3973;Dbxref=EnsemblGenomes-Gn:YE4018,EnsemblGenomes-Tr:CAL14036,GOA:A1JSJ7,InterPro:IPR000319,InterPro:IPR000534,InterPro:IPR011534,InterPro:IPR012080,InterPro:IPR012280,InterPro:IPR016040,UniProtKB/TrEMBL:A1JSJ7,NCBI_GP:CAL14036.1;Name=CAL14036.1;gbkey=CDS;gene=asd;product=aspartate semialdehyde dehydrogenase;protein_id=CAL14036.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4375941	4376582	.	-	.	ID=id7033;Note=Pfam match to entry PF02774 Semialdhyde_dhC%2CSemialdehyde dehydrogenase%2C dimerisation domain%2C score 279.0%2C E-value 4.1e-81;gbkey=misc_feature;gene=asd;inference=protein motif:PFAM:PF02774
AM286415.1	EMBL	sequence_feature	4376175	4376219	.	-	.	ID=id7034;Note=PS01103 Aspartate-semialdehyde dehydrogenase signature.;gbkey=misc_feature;gene=asd;inference=protein motif:Prosite:PS01103
AM286415.1	EMBL	sequence_feature	4376607	4376999	.	-	.	ID=id7035;Note=Pfam match to entry PF01118 Semialdhyde_dh%2CSemialdehyde dehydrogenase%2C NAD binding domain%2C score 155.0%2C E-value 8.6e-44;gbkey=misc_feature;gene=asd;inference=protein motif:PFAM:PF01118
AM286415.1	EMBL	gene	4377235	4377819	.	+	.	ID=gene3974;Name=yhgN;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=YE4019
AM286415.1	EMBL	CDS	4377235	4377819	.	+	0	ID=cds3867;Parent=gene3974;Dbxref=EnsemblGenomes-Gn:YE4019,EnsemblGenomes-Tr:CAL14037,GOA:A1JSJ8,InterPro:IPR002771,UniProtKB/TrEMBL:A1JSJ8,NCBI_GP:CAL14037.1;Name=CAL14037.1;gbkey=CDS;gene=yhgN;product=putative membrane protein;protein_id=CAL14037.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4377238	4377810	.	+	.	ID=id7036;Note=Pfam match to entry PF01914 MarC%2C MarC family integral membrane protein%2C score 257.6%2C E-value 1.1e-74;gbkey=misc_feature;gene=yhgN;inference=protein motif:PFAM:PF01914
AM286415.1	EMBL	sequence_feature	4377253	4377309	.	+	.	ID=id7037;Note=6 probable transmembrane helices predicted for YE4019 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-88%2C 103-125%2C132-151 and 171-193;gbkey=misc_feature;gene=yhgN;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4377352	4377420	.	+	.	ID=id7037;Note=6 probable transmembrane helices predicted for YE4019 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-88%2C 103-125%2C132-151 and 171-193;gbkey=misc_feature;gene=yhgN;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4377439	4377498	.	+	.	ID=id7037;Note=6 probable transmembrane helices predicted for YE4019 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-88%2C 103-125%2C132-151 and 171-193;gbkey=misc_feature;gene=yhgN;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4377541	4377609	.	+	.	ID=id7037;Note=6 probable transmembrane helices predicted for YE4019 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-88%2C 103-125%2C132-151 and 171-193;gbkey=misc_feature;gene=yhgN;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4377628	4377687	.	+	.	ID=id7037;Note=6 probable transmembrane helices predicted for YE4019 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-88%2C 103-125%2C132-151 and 171-193;gbkey=misc_feature;gene=yhgN;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4377745	4377813	.	+	.	ID=id7037;Note=6 probable transmembrane helices predicted for YE4019 by TMHMM2.0 at aa 7-25%2C 40-62%2C 69-88%2C 103-125%2C132-151 and 171-193;gbkey=misc_feature;gene=yhgN;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	4377727	4377756	.	+	.	ID=id7038;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=yhgN;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	4377936	4378448	.	-	.	ID=gene3975;Name=YE4020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4020
AM286415.1	EMBL	CDS	4377936	4378448	.	-	0	ID=cds3868;Parent=gene3975;Dbxref=EnsemblGenomes-Gn:YE4020,EnsemblGenomes-Tr:CAL14038,GOA:A1JSK0,InterPro:IPR000623,InterPro:IPR006001,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSK0,NCBI_GP:CAL14038.1;Name=CAL14038.1;gbkey=CDS;product=putative gluconokinase;protein_id=CAL14038.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4378398	4378421	.	-	.	ID=id7039;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4378670	4379986	.	+	.	ID=gene3976;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;gene_synonym=gntM,usgA;locus_tag=YE4021
AM286415.1	EMBL	CDS	4378670	4379986	.	+	0	ID=cds3869;Parent=gene3976;Dbxref=EnsemblGenomes-Gn:YE4021,EnsemblGenomes-Tr:CAL14039,GOA:A1JSK1,InterPro:IPR003474,UniProtKB/TrEMBL:A1JSK1,NCBI_GP:CAL14039.1;Name=CAL14039.1;gbkey=CDS;gene=gntT;product=putative gluconate permease;protein_id=CAL14039.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4378670	4379980	.	+	.	ID=id7040;Note=Pfam match to entry PF02447 GntP_permease%2C GntP family permease%2C score 949.1%2C E-value 7.3e-283;gbkey=misc_feature;gene=gntT;inference=protein motif:PFAM:PF02447
AM286415.1	EMBL	sequence_feature	4378712	4378780	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	4378817	4378885	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	4378967	4379035	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	4379072	4379131	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	4379189	4379257	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	4379330	4379398	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	4379456	4379515	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	4379552	4379620	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	4379678	4379782	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	4379801	4379869	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	4379912	4379980	.	+	.	ID=id7041;Note=11 probable transmembrane helices predicted for YE4021 by TMHMM2.0 at aa 15-37%2C 50-72%2C 100-122%2C 135-154%2C174-196%2C 221-243%2C 263-282%2C 295-317%2C 337-371%2C 378-400 and 415-437;gbkey=misc_feature;gene=gntT;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	4379930	4379962	.	+	.	ID=id7042;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=gntT;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4380011	4381006	.	-	.	ID=gene3977;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=YE4022
AM286415.1	EMBL	CDS	4380011	4381006	.	-	0	ID=cds3870;Parent=gene3977;Dbxref=EnsemblGenomes-Gn:YE4022,EnsemblGenomes-Tr:CAL14040,GOA:A1JSK2,InterPro:IPR000843,InterPro:IPR001761,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JSK2,NCBI_GP:CAL14040.1;Name=CAL14040.1;gbkey=CDS;gene=gntR;product=gluconate utilization system Gnt-I transcriptional repressor;protein_id=CAL14040.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4380026	4380820	.	-	.	ID=id7043;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 105.1%2C E-value 9e-29;gbkey=misc_feature;gene=gntR;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	sequence_feature	4380914	4380997	.	-	.	ID=id7044;Note=Pfam match to entry PF00356 lacI%2C Bacterial regulatory proteins%2C lacI family%2C score 40.8%2C E-value 2.1e-09;gbkey=misc_feature;gene=gntR;inference=protein motif:PFAM:PF00356
AM286415.1	EMBL	sequence_feature	4380929	4380985	.	-	.	ID=id7045;Note=PS00356 Bacterial regulatory proteins%2C lacI family signature.;gbkey=misc_feature;gene=gntR;inference=protein motif:Prosite:PS00356
AM286415.1	EMBL	gene	4381299	4381994	.	-	.	ID=gene3978;Name=YE4023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4023
AM286415.1	EMBL	CDS	4381299	4381994	.	-	0	ID=cds3871;Parent=gene3978;Dbxref=EnsemblGenomes-Gn:YE4023,EnsemblGenomes-Tr:CAL14041,InterPro:IPR003829,InterPro:IPR011051,InterPro:IPR012093,InterPro:IPR014710,UniProtKB/TrEMBL:A1JSK4,NCBI_GP:CAL14041.1;Name=CAL14041.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14041.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4381308	4381994	.	-	.	ID=id7046;Note=Pfam match to entry PF02678 DUF209%2C Uncharacterized BCR%2C YhhW family COG1741%2C score 516.9%2C E-value 9.4e-153;gbkey=misc_feature;inference=protein motif:PFAM:PF02678
AM286415.1	EMBL	transcript	4382149	4382251	.	-	.	ID=rna143;Note=RyhB RNA (RF00057) as predicted by Rfam%2C score 43.68%2C positions 1 to 97;gbkey=misc_RNA
AM286415.1	EMBL	exon	4382149	4382251	.	-	.	ID=id7047;Parent=rna143;Note=RyhB RNA (RF00057) as predicted by Rfam%2C score 43.68%2C positions 1 to 97;gbkey=misc_RNA
AM286415.1	EMBL	gene	4382381	4382881	.	+	.	ID=gene3979;Name=YE4024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4024
AM286415.1	EMBL	CDS	4382381	4382881	.	+	0	ID=cds3872;Parent=gene3979;Dbxref=EnsemblGenomes-Gn:YE4024,EnsemblGenomes-Tr:CAL14042,GOA:A1JSK5,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JSK5,NCBI_GP:CAL14042.1;Name=CAL14042.1;Note=Similar to Salmonella typhi putative acetyltransferase sty4265 SWALL:Q8Z238 (EMBL:AL627281) (162 aa) fasta scores: E(): 2.2e-35%2C 53.37 38d in 163 aa%2Cand to Escherichia coli%2C and Escherichia coli O157:H7 spermidine n(1)-acetyltransferase speg or b1584 or z2571 or ecs2290 SWALL:ATDA_ECOLI (SWALL:P37354) (185 aa) fasta scores: E(): 5.4e-05%2C 29.63 38d in 162 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P37354;product=Hypothetical protein;protein_id=CAL14042.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4382543	4382794	.	+	.	ID=id7048;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 70.9%2C E-value 1.7e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	4382949	4383845	.	-	.	ID=gene3980;Name=YE4025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4025
AM286415.1	EMBL	CDS	4382949	4383845	.	-	0	ID=cds3873;Parent=gene3980;Dbxref=EnsemblGenomes-Gn:YE4025,EnsemblGenomes-Tr:CAL14043,GOA:A1JSK6,InterPro:IPR013022,InterPro:IPR023952,NCBI_GP:CAL14043.1;Name=CAL14043.1;Note=Similar to Bacillus subtilis IolE protein iolE or e83E SWALL:IOLE_BACSU (SWALL:P42416) (297 aa) fasta scores: E(): 5.3e-53%2C 47.11 38d in 295 aa%2C and to Rhizobium leguminosarum MocC mocC SWALL:O85770 (EMBL:AF076240) (295 aa) fasta scores: E(): 1.6e-41%2C 40.2 id in 296 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P42416;product=conserved hypothetical protein;protein_id=CAL14043.1;transl_table=11
AM286415.1	EMBL	gene	4383979	4384992	.	-	.	ID=gene3981;Name=idh;gbkey=Gene;gene=idh;gene_biotype=protein_coding;locus_tag=YE4026
AM286415.1	EMBL	CDS	4383979	4384992	.	-	0	ID=cds3874;Parent=gene3981;Dbxref=EnsemblGenomes-Gn:YE4026,EnsemblGenomes-Tr:CAL14044,GOA:A1JSK7,InterPro:IPR000683,InterPro:IPR004104,InterPro:IPR016040,InterPro:IPR023794,NCBI_GP:CAL14044.1;Name=CAL14044.1;Note=Similar to Bacillus subtilis myo-inositol 2-dehydrogenase idh or iolG or e83G SWALL:MI2D_BACSU (SWALL:P26935) (344 aa) fasta scores: E(): 2.2e-83%2C 60.71 id in 336 aa%2C and to Ralstonia solanacearum putative oxidoreductase myo-inositol 2-dehydrogenase signal peptide protein iolg or rsc1246 or rs02754 SWALL:Q8XZZ9 (EMBL:AL646063) (337 aa) fasta scores: E(): 4.6e-94%2C69.85 38d in 335 aa;gbkey=CDS;gene=idh;inference=similar to sequence:UniProtKB:P26935;product=myo-inositol 2-dehydrogenase;protein_id=CAL14044.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4384273	4384584	.	-	.	ID=id7049;Note=Pfam match to entry PF02894 GFO_IDH_MocA_C%2COxidoreductase family%2C C-terminal alpha/beta domain %2Cscore 52.9%2C E-value 4.7e-13;gbkey=misc_feature;gene=idh;inference=protein motif:PFAM:PF02894
AM286415.1	EMBL	sequence_feature	4384618	4384986	.	-	.	ID=id7050;Note=Pfam match to entry PF01408 GFO_IDH_MocA%2COxidoreductase family%2C NAD-binding Rossmann fold%2C score 132.2%2C E-value 6.2e-37;gbkey=misc_feature;gene=idh;inference=protein motif:PFAM:PF01408
AM286415.1	EMBL	gene	4385072	4387012	.	-	.	ID=gene3982;Name=YE4027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4027
AM286415.1	EMBL	CDS	4385072	4387012	.	-	0	ID=cds3875;Parent=gene3982;Dbxref=EnsemblGenomes-Gn:YE4027,EnsemblGenomes-Tr:CAL14045,GOA:A1JSK8,InterPro:IPR000399,InterPro:IPR011766,InterPro:IPR012000,InterPro:IPR012001,InterPro:IPR029035,InterPro:IPR029061,UniProtKB/TrEMBL:A1JSK8,NCBI_GP:CAL14045.1;Name=CAL14045.1;gbkey=CDS;product=putative thiamine pyrophosphate-dependent protein;protein_id=CAL14045.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4385210	4385770	.	-	.	ID=id7051;Note=Pfam match to entry PF02775 TPP_enzymes_C%2C Thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain %2Cscore 155.9%2C E-value 4.4e-44;gbkey=misc_feature;inference=protein motif:PFAM:PF02775
AM286415.1	EMBL	sequence_feature	4385522	4385581	.	-	.	ID=id7052;Note=PS00187 Thiamine pyrophosphate enzymes signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00187
AM286415.1	EMBL	sequence_feature	4385903	4386370	.	-	.	ID=id7053;Note=Pfam match to entry PF00205 TPP_enzymes%2C Thiamine pyrophosphate enzyme%2C central domain%2C score 97.8%2C E-value 1.4e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF00205
AM286415.1	EMBL	sequence_feature	4386416	4387003	.	-	.	ID=id7054;Note=Pfam match to entry PF02776 TPP_enzymes_N%2C Thiamine pyrophosphate enzyme%2C N-terminal TPP binding domain %2Cscore 93.7%2C E-value 2.4e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF02776
AM286415.1	EMBL	gene	4387501	4389402	.	+	.	ID=gene3983;Name=YE4028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4028
AM286415.1	EMBL	CDS	4387501	4389402	.	+	0	ID=cds3876;Parent=gene3983;Dbxref=EnsemblGenomes-Gn:YE4028,EnsemblGenomes-Tr:CAL14046,GOA:A1JSL0,InterPro:IPR002173,InterPro:IPR011611,InterPro:IPR018659,InterPro:IPR029056,UniProtKB/TrEMBL:A1JSL0,NCBI_GP:CAL14046.1;Name=CAL14046.1;gbkey=CDS;product=putative carbohydrate kinase;protein_id=CAL14046.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4387501	4388457	.	+	.	ID=id7055;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 187.3%2C E-value 1.6e-53;gbkey=misc_feature;inference=protein motif:PFAM:PF00294
AM286415.1	EMBL	sequence_feature	4388308	4388349	.	+	.	ID=id7056;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00584
AM286415.1	EMBL	gene	4389687	4390520	.	+	.	ID=gene3984;Name=YE4029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4029
AM286415.1	EMBL	CDS	4389687	4390520	.	+	0	ID=cds3877;Parent=gene3984;Dbxref=EnsemblGenomes-Gn:YE4029,EnsemblGenomes-Tr:CAL14047,GOA:A1JSL2,InterPro:IPR000281,InterPro:IPR001347,InterPro:IPR009057,InterPro:IPR011991,UniProtKB/TrEMBL:A1JSL2,NCBI_GP:CAL14047.1;Name=CAL14047.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14047.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4389708	4389908	.	+	.	ID=id7057;Note=Pfam match to entry PF01418 HTH_6%2C Helix-turn-helix domain%2C rpiR family%2C score 39.1%2C E-value 2.2e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF01418
AM286415.1	EMBL	sequence_feature	4390104	4390517	.	+	.	ID=id7058;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 27.1%2C E-value 2.7e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	gene	4390615	4391439	.	-	.	ID=gene3985;Name=YE4030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4030
AM286415.1	EMBL	CDS	4390615	4391439	.	-	0	ID=cds3878;Parent=gene3985;Dbxref=EnsemblGenomes-Gn:YE4030,EnsemblGenomes-Tr:CAL14048,GOA:A1JSM2,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR021120,InterPro:IPR024203,UniProtKB/TrEMBL:A1JSM2,NCBI_GP:CAL14048.1;Name=CAL14048.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14048.1;transl_table=11
AM286415.1	EMBL	gene	4391495	4393000	.	-	.	ID=gene3986;Name=YE4031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4031
AM286415.1	EMBL	CDS	4391495	4393000	.	-	0	ID=cds3879;Parent=gene3986;Dbxref=EnsemblGenomes-Gn:YE4031,EnsemblGenomes-Tr:CAL14049,GOA:A1JSM3,InterPro:IPR010061,InterPro:IPR015590,InterPro:IPR016161,InterPro:IPR016162,InterPro:IPR016163,UniProtKB/TrEMBL:A1JSM3,NCBI_GP:CAL14049.1;Name=CAL14049.1;gbkey=CDS;product=putative aldehyde dehydrogenase;protein_id=CAL14049.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4391546	4392958	.	-	.	ID=id7059;Note=Pfam match to entry PF00171 aldedh%2C Aldehyde dehydrogenase family%2C score 528.5%2C E-value 3.2e-156;gbkey=misc_feature;inference=protein motif:PFAM:PF00171
AM286415.1	EMBL	gene	4393545	4394759	.	-	.	ID=gene3987;Name=YE4032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4032
AM286415.1	EMBL	CDS	4393545	4394759	.	-	0	ID=cds3880;Parent=gene3987;Dbxref=EnsemblGenomes-Gn:YE4032,EnsemblGenomes-Tr:CAL14050,GOA:A1JSM4,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JSM4,NCBI_GP:CAL14050.1;Name=CAL14050.1;Note=Similar to Ralstonia solanacearum probable transmembrane protein rsp0078 or rs05543 SWALL:Q8XTM8 (EMBL:AL646076) (399 aa) fasta scores: E(): 1e-52%2C 44.61 id in 390 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646076;product=Putative membrane transport protein;protein_id=CAL14050.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4394631	4394699	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	4394520	4394588	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	4394433	4394501	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	4394271	4394324	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	4394184	4394252	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	4394103	4394156	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	4394016	4394084	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	4393920	4393988	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	4393833	4393901	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	4393755	4393823	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	4393638	4393706	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	4393557	4393625	.	-	.	ID=id7060;Note=12 probable transmembrane helices predicted for YE4032 by TMHMM2.0 at aa 21-43%2C 58-80%2C 87-109%2C 146-163%2C170-192%2C 202-219%2C 226-248%2C 258-280%2C 287-309%2C 313-335%2C352-374 and 379-401;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	4393560	4394696	.	-	.	ID=id7061;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -96.5%2C E-value 0.00019;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	4394855	4395808	.	+	.	ID=gene3988;Name=YE4033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4033
AM286415.1	EMBL	CDS	4394855	4395808	.	+	0	ID=cds3881;Parent=gene3988;Dbxref=EnsemblGenomes-Gn:YE4033,EnsemblGenomes-Tr:CAL14051,GOA:A1JSM5,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JSM5,NCBI_GP:CAL14051.1;Name=CAL14051.1;Note=Similar to Pseudomonas aeruginosa transcriptional regulator ptxR or pa2258 SWALL:PTXR_PSEAE (SWALL:P72131) (312 aa) fasta scores: E(): 9.2e-24%2C 30.9 38d in 288 aa%2Cand to Synechocystis sp. transcriptional regulator slr1245 SWALL:P73778 (EMBL:D90909) (302 aa) fasta scores: E(): 4.8e-30%2C 32.64 38d in 291 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P72131;product=Putative transcriptional regulator of the LysR family;protein_id=CAL14051.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4394933	4395067	.	+	.	ID=id7062;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 38.8%2C E-value 8.2e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	sequence_feature	4395137	4395760	.	+	.	ID=id7063;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 145.6%2C E-value 5.8e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	gene	4396053	4396757	.	+	.	ID=gene3989;Name=YE4034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4034
AM286415.1	EMBL	CDS	4396053	4396757	.	+	0	ID=cds3882;Parent=gene3989;Dbxref=EnsemblGenomes-Gn:YE4034,EnsemblGenomes-Tr:CAL14052,GOA:A1JSM7,InterPro:IPR006379,InterPro:IPR023214,UniProtKB/TrEMBL:A1JSM7,NCBI_GP:CAL14052.1;Name=CAL14052.1;gbkey=CDS;product=Hypothetical protein with putative haloacid dehalogenase-like hydrolase motif;protein_id=CAL14052.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4396494	4396664	.	+	.	ID=id7064;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 27.8%2C E-value 1.9e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	4396593	4396661	.	+	.	ID=id7065;Note=PS01229 Hypothetical cof family signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS01229
AM286415.1	EMBL	gene	4397017	4397607	.	-	.	ID=gene3990;Name=btuR;gbkey=Gene;gene=btuR;gene_biotype=protein_coding;locus_tag=YE4035
AM286415.1	EMBL	CDS	4397017	4397607	.	-	0	ID=cds3883;Parent=gene3990;Dbxref=EnsemblGenomes-Gn:YE4035,EnsemblGenomes-Tr:CAL14053,GOA:A1JSM8,InterPro:IPR003724,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSM8,NCBI_GP:CAL14053.1;Name=CAL14053.1;Note=Similar to Escherichia coli cob btuR or cobA or b1270 SWALL:BTUR_ECOLI (SWALL:P13040) (196 aa) fasta scores: E(): 2.6e-52%2C 67.34 38d in 196 aa%3B Similar to Yersinia pestis cob btuR or ypo2214 SWALL:Q8ZEF9 (EMBL:AJ414151) (196 aa) fasta scores: E(): 1.8e-53%2C 66.32 38d in 196 aa%3B possibly involved in the metabolism of adenosylcobalamin;gbkey=CDS;gene=btuR;inference=similar to sequence:UniProtKB:P13040;product=cob(i)alamin adenosyltransferase;protein_id=CAL14053.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4397020	4397544	.	-	.	ID=id7066;Note=Pfam match to entry PF02572 CobA_CobO_BtuR%2CATP:corrinoid adenosyltransferase BtuR/CobO/CobP%2C score 339.8%2C E-value 2e-99;gbkey=misc_feature;gene=btuR;inference=protein motif:PFAM:PF02572
AM286415.1	EMBL	gene	4397629	4399275	.	-	.	ID=gene3991;Name=fumB;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=YE4036
AM286415.1	EMBL	CDS	4397629	4399275	.	-	0	ID=cds3884;Parent=gene3991;Dbxref=EnsemblGenomes-Gn:YE4036,EnsemblGenomes-Tr:CAL14054,GOA:A1JSM9,InterPro:IPR004646,InterPro:IPR004647,InterPro:IPR011167,InterPro:IPR020557,UniProtKB/TrEMBL:A1JSM9,NCBI_GP:CAL14054.1;Name=CAL14054.1;Note=Similar to Yersinia pestis fumarate hydratase%2Cclass I FumA or ypo3335 SWALL:Q8ZBR9 (EMBL:AJ414156) (547 aa) fasta scores: E(): 8.5e-169%2C 74.35 38d in 546 aa%3B Similar to Escherichia coli fumarate hydratase class I%2C anaerobic fumB or b4122 SWALL:FUMB_ECOLI (SWALL:P14407) (548 aa) fasta scores: E(): 1.9e-161%2C70.98 38d in 548 aa%3B regulated by FNR in E.coli;gbkey=CDS;gene=fumB;inference=similar to sequence:UniProtKB:P14407;product=fumarate hydratase class I%2C anaerobic;protein_id=CAL14054.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4397791	4399230	.	-	.	ID=id7067;Note=Pfam match to entry PF00206 lyase_1%2C Lyase%2C score 100.0%2C E-value 3e-27;gbkey=misc_feature;gene=fumB;inference=protein motif:PFAM:PF00206
AM286415.1	EMBL	sequence_feature	4397881	4397910	.	-	.	ID=id7068;Note=PS00163 Fumarate lyases signature.;gbkey=misc_feature;gene=fumB;inference=protein motif:Prosite:PS00163
AM286415.1	EMBL	sequence_feature	4398322	4398354	.	-	.	ID=id7069;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=fumB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4399544	4400464	.	-	.	ID=gene3992;Name=YE4037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4037
AM286415.1	EMBL	CDS	4399544	4400464	.	-	0	ID=cds3885;Parent=gene3992;Dbxref=EnsemblGenomes-Gn:YE4037,EnsemblGenomes-Tr:CAL14055,GOA:A1JSN1,InterPro:IPR000847,InterPro:IPR005119,InterPro:IPR011991,UniProtKB/TrEMBL:A1JSN1,NCBI_GP:CAL14055.1;Name=CAL14055.1;Note=Similar to Escherichia coli O157:H7 putative lysR-like transcriptional regulator z0885 or ecs0755 SWALL:Q8X4W1 (EMBL:AE005251) (301 aa) fasta scores: E(): 1.7e-72%2C 63.17 38d in 296 aa%3B Similar to Escherichia coli%2C and Escherichia coli O157:H7 glycine cleavage system transcriptional activator gcvA or b2808 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 1.3e-26%2C 32.78 id in 302 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P32064;product=Putative LysR family transcriptional regulator;protein_id=CAL14055.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4399577	4400197	.	-	.	ID=id7070;Note=Pfam match to entry PF03466 LysR_substrate%2C LysR substrate binding domain%2C score 96.1%2C E-value 4.7e-26;gbkey=misc_feature;inference=protein motif:PFAM:PF03466
AM286415.1	EMBL	sequence_feature	4400264	4400443	.	-	.	ID=id7071;Note=Pfam match to entry PF00126 HTH_1%2C Bacterial regulatory helix-turn-helix protein%2C lysR family%2C score 74.1%2C E-value 1.9e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00126
AM286415.1	EMBL	gene	4400906	4401688	.	+	.	ID=gene3993;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=YE4038
AM286415.1	EMBL	CDS	4400906	4401688	.	+	0	ID=cds3886;Parent=gene3993;Dbxref=EnsemblGenomes-Gn:YE4038,EnsemblGenomes-Tr:CAL14056,GOA:A1JSN2,InterPro:IPR000878,InterPro:IPR003043,InterPro:IPR006366,InterPro:IPR014776,InterPro:IPR014777,UniProtKB/TrEMBL:A1JSN2,NCBI_GP:CAL14056.1;Name=CAL14056.1;Note=Similar to Bacillus megaterium uroporphyrin-III C-methyltransferase CobA SWALL:SUMT_BACME (SWALL:P29928) (238 aa) fasta scores: E(): 6.5e-40%2C 47.89 38d in 238 aa%2Cand to Listeria innocua hypothetical protein Lin1164 lin1164 SWALL:Q92CK7 (EMBL:AL596167) (493 aa) fasta scores: E(): 1.2e-50%2C 52.75 38d in 254 aa;gbkey=CDS;gene=cobA;inference=similar to sequence:UniProtKB:P29928;product=uroporphyrin-III C-methyltransferase;protein_id=CAL14056.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4400918	4401553	.	+	.	ID=id7072;Note=Pfam match to entry PF00590 TP_methylase%2CTetrapyrrole (Corrin/Porphyrin) Methylases%2C score 247.9%2CE-value 8.9e-72;gbkey=misc_feature;gene=cobA;inference=protein motif:PFAM:PF00590
AM286415.1	EMBL	sequence_feature	4400930	4400974	.	+	.	ID=id7073;Note=PS00839 Uroporphyrin-III C-methyltransferase signature 1.;gbkey=misc_feature;gene=cobA;inference=protein motif:Prosite:PS00839
AM286415.1	EMBL	sequence_feature	4401155	4401256	.	+	.	ID=id7074;Note=PS00840 Uroporphyrin-III C-methyltransferase signature 2.;gbkey=misc_feature;gene=cobA;inference=protein motif:Prosite:PS00840
AM286415.1	EMBL	gene	4401710	4402591	.	+	.	ID=gene3994;Name=pduX;gbkey=Gene;gene=pduX;gene_biotype=protein_coding;locus_tag=YE4039
AM286415.1	EMBL	CDS	4401710	4402591	.	+	0	ID=cds3887;Parent=gene3994;Dbxref=EnsemblGenomes-Gn:YE4039,EnsemblGenomes-Tr:CAL14057,GOA:A1JSN3,InterPro:IPR006204,InterPro:IPR014721,InterPro:IPR020568,UniProtKB/TrEMBL:A1JSN3,NCBI_GP:CAL14057.1;Name=CAL14057.1;Note=Similar to Salmonella typhimurium%2C and Salmonella enterica subsp. enterica serovar Typhimurium propanediol utilization pduX or stm2058 SWALL:Q9XDM4 (EMBL:AE008790) (300 aa) fasta scores: E(): 1.5e-54%2C 53.28 38d in 289 aa%3B involved in propanediol utilization;gbkey=CDS;gene=pduX;inference=similar to sequence:INSDC:AE008790;product=PduX;protein_id=CAL14057.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4401947	4402090	.	+	.	ID=id7075;Note=Pfam match to entry PF00288 GHMP_kinases%2C GHMP kinases putative ATP-binding protein%2C score 27.5%2C E-value 7e-08;gbkey=misc_feature;gene=pduX;inference=protein motif:PFAM:PF00288
AM286415.1	EMBL	gene	4403047	4403493	.	+	.	ID=gene3995;Name=mamA;gbkey=Gene;gene=mamA;gene_biotype=protein_coding;locus_tag=YE4040
AM286415.1	EMBL	CDS	4403047	4403493	.	+	0	ID=cds3888;Parent=gene3995;Dbxref=EnsemblGenomes-Gn:YE4040,EnsemblGenomes-Tr:CAL14058,GOA:A1JSN5,InterPro:IPR006158,InterPro:IPR006394,NCBI_GP:CAL14058.1;Name=CAL14058.1;Note=Similar to Escherichia coli O157:H7 methylaspartate mutase S chain MamA or z0895 or ecs0764 SWALL:MAMA_ECO57 (SWALL:P58620) (149 aa) fasta scores: E(): 3.5e-41%2C 77.94 id in 136 aa;gbkey=CDS;gene=mamA;inference=similar to sequence:UniProtKB:P58620;product=methylaspartate mutase;protein_id=CAL14058.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4403056	4403418	.	+	.	ID=id7076;Note=Pfam match to entry PF02310 B12-binding%2C B12 binding domain%2C score 94.7%2C E-value 1.2e-25;gbkey=misc_feature;gene=mamA;inference=protein motif:PFAM:PF02310
AM286415.1	EMBL	gene	4403490	4404881	.	+	.	ID=gene3996;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=YE4041
AM286415.1	EMBL	CDS	4403490	4404881	.	+	0	ID=cds3889;Parent=gene3996;Dbxref=EnsemblGenomes-Gn:YE4041,EnsemblGenomes-Tr:CAL14059,InterPro:IPR006230,UniProtKB/TrEMBL:A1JSN6,NCBI_GP:CAL14059.1;Name=CAL14059.1;Note=Similar to Escherichia coli O157:H7 z0894 protein z0894 or ecs0763 SWALL:Q8X985 (EMBL:AE005251) (462 aa) fasta scores: E(): 3.5e-125%2C 66.16 38d in 461 aa%2C and to Clostridium tetanomorphum MutL protein mutL SWALL:MUTL_CLOTT (SWALL:Q05491) (462 aa) fasta scores: E(): 4.7e-40%2C 33.76 38d in 468 aa;gbkey=CDS;gene=mutL;inference=similar to sequence:UniProtKB:Q05491;product=glutamate mutase;protein_id=CAL14059.1;transl_table=11
AM286415.1	EMBL	gene	4404896	4406341	.	+	.	ID=gene3997;Name=mutE;gbkey=Gene;gene=mutE;gene_biotype=protein_coding;locus_tag=YE4042
AM286415.1	EMBL	CDS	4404896	4406341	.	+	0	ID=cds3890;Parent=gene3997;Dbxref=EnsemblGenomes-Gn:YE4042,EnsemblGenomes-Tr:CAL14060,GOA:A1JSN7,InterPro:IPR006396,InterPro:IPR014348,InterPro:IPR014714,InterPro:IPR016176,NCBI_GP:CAL14060.1;Name=CAL14060.1;Note=Similar to Clostridium tetanomorphum methylaspartate mutase E chain mutE SWALL:GLME_CLOTT (SWALL:Q05509) (485 aa) fasta scores: E(): 1.1e-114%2C58.38 38d in 483 aa%2C and to Citrobacter amalonaticus glutamate mutase SWALL:O66144 (EMBL:AB005294) (481 aa) fasta scores: E(): 1.2e-163%2C 82.32 38d in 481 aa%3B High similarity to B12-dependent glutamate mutases;gbkey=CDS;gene=mutE;inference=similar to sequence:UniProtKB:Q05509;product=methylaspartate mutase E chain;protein_id=CAL14060.1;transl_table=11
AM286415.1	EMBL	gene	4406341	4407585	.	+	.	ID=gene3998;Name=YE4043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4043
AM286415.1	EMBL	CDS	4406341	4407585	.	+	0	ID=cds3891;Parent=gene3998;Dbxref=EnsemblGenomes-Gn:YE4043,EnsemblGenomes-Tr:CAL14061,GOA:A1JSN8,InterPro:IPR001354,InterPro:IPR006395,InterPro:IPR022662,InterPro:IPR022665,InterPro:IPR029017,InterPro:IPR029065,UniProtKB/TrEMBL:A1JSN8,NCBI_GP:CAL14061.1;Name=CAL14061.1;Note=Similar to Clostridium tetanomorphum methylaspartate ammonia-lyase SWALL:MAAL_CLOTT (SWALL:Q05514) (413 aa) fasta scores: E(): 7.2e-82%2C 54.54 id in 407 aa%2C and to Citrobacter amalonaticus 3-methylaspartate ammonia-lyase SWALL:O66145 (EMBL:AB005294) (413 aa) fasta scores: E(): 1.5e-131%2C81.31 38d in 412 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q05514;product=methylaspartate ammonia-lyase;protein_id=CAL14061.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4406347	4406379	.	+	.	ID=id7077;Note=PS00639 Eukaryotic thiol (cysteine) proteases histidine active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00639
AM286415.1	EMBL	gene	4407587	4408960	.	+	.	ID=gene3999;Name=YE4044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4044
AM286415.1	EMBL	CDS	4407587	4408960	.	+	0	ID=cds3892;Parent=gene3999;Dbxref=EnsemblGenomes-Gn:YE4044,EnsemblGenomes-Tr:CAL14062,InterPro:IPR010839,UniProtKB/TrEMBL:A1JSN9,NCBI_GP:CAL14062.1;Name=CAL14062.1;Note=Similar to Citrobacter amalonaticus DNA for 3-methylaspartate ammonia-lyase%2C glutamate mutase SWALL:O66146 (EMBL:AB005294) (295 aa) fasta scores: E(): 9.8e-97%2C 86.62 38d in 284 aa%2C and to Escherichia coli O157:H7 hypothetical protein z0891 z0891 or ecs0760 SWALL:Q8X991 (EMBL:AE005251) (456 aa) fasta scores: E(): 9.3e-140%2C 77.02 38d in 457 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005251;product=conserved hypothetical protein;protein_id=CAL14062.1;transl_table=11
AM286415.1	EMBL	gene	4408957	4409274	.	+	.	ID=gene4000;Name=YE4045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4045
AM286415.1	EMBL	CDS	4408957	4409274	.	+	0	ID=cds3893;Parent=gene4000;Dbxref=EnsemblGenomes-Gn:YE4045,EnsemblGenomes-Tr:CAL14063,InterPro:IPR025496,UniProtKB/TrEMBL:A1JSP1,NCBI_GP:CAL14063.1;Name=CAL14063.1;Note=Similar to Escherichia coli O157:H7 hypothetical protein z0890 or ecs0759 SWALL:Q8X998 (EMBL:AE005251) (105 aa) fasta scores: E(): 2.1e-29%2C 70.47 38d in 105 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE005251;product=conserved hypothetical protein;protein_id=CAL14063.1;transl_table=11
AM286415.1	EMBL	gene	4409436	4410761	.	+	.	ID=gene4001;Name=YE4046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4046
AM286415.1	EMBL	CDS	4409436	4410761	.	+	0	ID=cds3894;Parent=gene4001;Dbxref=EnsemblGenomes-Gn:YE4046,EnsemblGenomes-Tr:CAL14064,GOA:A1JSP2,InterPro:IPR001991,UniProtKB/TrEMBL:A1JSP2,NCBI_GP:CAL14064.1;Name=CAL14064.1;Note=Similar to Escherichia coli O157:H7 putative symport protein z0888 or ecs0758 SWALL:Q8X4W0 (EMBL:AE005251) (426 aa) fasta scores: E(): 1e-120%2C 76.83 id in 423 aa%2C and to Bacillus stearothermophilus proton/sodium-glutamate symport protein gltT SWALL:GLTT_BACST (SWALL:P24943) (421 aa) fasta scores: E(): 8.4e-53%2C 38.91 38d in 424 aa%3B High similarity to proton/sodium-glutamate symporters. Contains motif found in sodium-dicarboxylic acid transporters. Position adjacent to putative glutamate mutase genes may indicate that a glutamate transporter is more likely.;gbkey=CDS;inference=similar to sequence:UniProtKB:P24943;product=Putative sodium-dicarboxylic acid transporter family protein;protein_id=CAL14064.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4409448	4409516	.	+	.	ID=id7078;Note=7 probable transmembrane helices predicted for YE4046 by TMHMM2.0 at aa 5-27%2C 46-68%2C 83-105%2C 152-169%2C184-206%2C 218-240 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	4409571	4409639	.	+	.	ID=id7078;Note=7 probable transmembrane helices predicted for YE4046 by TMHMM2.0 at aa 5-27%2C 46-68%2C 83-105%2C 152-169%2C184-206%2C 218-240 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	4409682	4409750	.	+	.	ID=id7078;Note=7 probable transmembrane helices predicted for YE4046 by TMHMM2.0 at aa 5-27%2C 46-68%2C 83-105%2C 152-169%2C184-206%2C 218-240 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	4409889	4409942	.	+	.	ID=id7078;Note=7 probable transmembrane helices predicted for YE4046 by TMHMM2.0 at aa 5-27%2C 46-68%2C 83-105%2C 152-169%2C184-206%2C 218-240 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	4409985	4410053	.	+	.	ID=id7078;Note=7 probable transmembrane helices predicted for YE4046 by TMHMM2.0 at aa 5-27%2C 46-68%2C 83-105%2C 152-169%2C184-206%2C 218-240 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	4410087	4410155	.	+	.	ID=id7078;Note=7 probable transmembrane helices predicted for YE4046 by TMHMM2.0 at aa 5-27%2C 46-68%2C 83-105%2C 152-169%2C184-206%2C 218-240 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	4410321	4410389	.	+	.	ID=id7078;Note=7 probable transmembrane helices predicted for YE4046 by TMHMM2.0 at aa 5-27%2C 46-68%2C 83-105%2C 152-169%2C184-206%2C 218-240 and 296-318;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	sequence_feature	4409451	4410641	.	+	.	ID=id7079;Note=Pfam match to entry PF00375 SDF%2CSodium:dicarboxylate symporter family%2C score 361.7%2CE-value 4.9e-106;gbkey=misc_feature;inference=protein motif:PFAM:PF00375
AM286415.1	EMBL	sequence_feature	4410129	4410161	.	+	.	ID=id7080;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4410369	4410401	.	+	.	ID=id7081;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4410848	4412047	.	-	.	ID=gene4002;Name=YE4047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4047
AM286415.1	EMBL	CDS	4410848	4412047	.	-	0	ID=cds3895;Parent=gene4002;Dbxref=EnsemblGenomes-Gn:YE4047,EnsemblGenomes-Tr:CAL14065,GOA:A1JSP3,InterPro:IPR004792,InterPro:IPR013027,InterPro:IPR023166,UniProtKB/TrEMBL:A1JSP3,NCBI_GP:CAL14065.1;Name=CAL14065.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14065.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4410884	4411906	.	-	.	ID=id7082;Note=Pfam match to entry PF03486 HI0933_like%2CHI0933-like protein%2C score 626.6%2C E-value 9.4e-186;gbkey=misc_feature;inference=protein motif:PFAM:PF03486
AM286415.1	EMBL	gene	4412359	4413855	.	+	.	ID=gene4003;Name=YE4048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4048
AM286415.1	EMBL	CDS	4412359	4413855	.	+	0	ID=cds3896;Parent=gene4003;Dbxref=EnsemblGenomes-Gn:YE4048,EnsemblGenomes-Tr:CAL14066,GOA:A1JSP5,InterPro:IPR001204,UniProtKB/TrEMBL:A1JSP5,NCBI_GP:CAL14066.1;Name=CAL14066.1;gbkey=CDS;product=phosphate transport protein;protein_id=CAL14066.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4412386	4412454	.	+	.	ID=id7083;Note=9 probable transmembrane helices predicted for YE4048 by TMHMM2.0 at aa 10-32%2C 52-74%2C 94-116%2C 123-145%2C155-177%2C 207-224%2C 234-256%2C 378-400 and 472-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	4412512	4412580	.	+	.	ID=id7083;Note=9 probable transmembrane helices predicted for YE4048 by TMHMM2.0 at aa 10-32%2C 52-74%2C 94-116%2C 123-145%2C155-177%2C 207-224%2C 234-256%2C 378-400 and 472-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	4412638	4412706	.	+	.	ID=id7083;Note=9 probable transmembrane helices predicted for YE4048 by TMHMM2.0 at aa 10-32%2C 52-74%2C 94-116%2C 123-145%2C155-177%2C 207-224%2C 234-256%2C 378-400 and 472-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	4412725	4412793	.	+	.	ID=id7083;Note=9 probable transmembrane helices predicted for YE4048 by TMHMM2.0 at aa 10-32%2C 52-74%2C 94-116%2C 123-145%2C155-177%2C 207-224%2C 234-256%2C 378-400 and 472-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	4412821	4412889	.	+	.	ID=id7083;Note=9 probable transmembrane helices predicted for YE4048 by TMHMM2.0 at aa 10-32%2C 52-74%2C 94-116%2C 123-145%2C155-177%2C 207-224%2C 234-256%2C 378-400 and 472-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	4412977	4413030	.	+	.	ID=id7083;Note=9 probable transmembrane helices predicted for YE4048 by TMHMM2.0 at aa 10-32%2C 52-74%2C 94-116%2C 123-145%2C155-177%2C 207-224%2C 234-256%2C 378-400 and 472-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	4413058	4413126	.	+	.	ID=id7083;Note=9 probable transmembrane helices predicted for YE4048 by TMHMM2.0 at aa 10-32%2C 52-74%2C 94-116%2C 123-145%2C155-177%2C 207-224%2C 234-256%2C 378-400 and 472-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	4413490	4413558	.	+	.	ID=id7083;Note=9 probable transmembrane helices predicted for YE4048 by TMHMM2.0 at aa 10-32%2C 52-74%2C 94-116%2C 123-145%2C155-177%2C 207-224%2C 234-256%2C 378-400 and 472-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	4413772	4413840	.	+	.	ID=id7083;Note=9 probable transmembrane helices predicted for YE4048 by TMHMM2.0 at aa 10-32%2C 52-74%2C 94-116%2C 123-145%2C155-177%2C 207-224%2C 234-256%2C 378-400 and 472-494;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	sequence_feature	4412446	4413819	.	+	.	ID=id7084;Note=Pfam match to entry PF01384 PHO4%2C Phosphate transporter family%2C score 365.7%2C E-value 3.2e-107;gbkey=misc_feature;inference=protein motif:PFAM:PF01384
AM286415.1	EMBL	gene	4413962	4414297	.	-	.	ID=gene4004;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=YE4049
AM286415.1	EMBL	CDS	4413962	4414297	.	-	0	ID=cds3897;Parent=gene4004;Dbxref=EnsemblGenomes-Gn:YE4049,EnsemblGenomes-Tr:CAL14067,GOA:A1JSP6,InterPro:IPR019598,NCBI_GP:CAL14067.1;Name=CAL14067.1;gbkey=CDS;gene=uspB;product=universal stress protein B;protein_id=CAL14067.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4414226	4414285	.	-	.	ID=id7085;Note=2 probable transmembrane helices predicted for YE4049 by TMHMM2.0 at aa 5-24 and 88-110;gbkey=misc_feature;gene=uspB;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4413968	4414036	.	-	.	ID=id7085;Note=2 probable transmembrane helices predicted for YE4049 by TMHMM2.0 at aa 5-24 and 88-110;gbkey=misc_feature;gene=uspB;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	4414990	4415436	.	+	.	ID=gene4005;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=YE4050
AM286415.1	EMBL	CDS	4414990	4415436	.	+	0	ID=cds3898;Parent=gene4005;Dbxref=EnsemblGenomes-Gn:YE4050,EnsemblGenomes-Tr:CAL14068,GOA:A1JSP7,InterPro:IPR006015,InterPro:IPR006016,InterPro:IPR014729,UniProtKB/TrEMBL:A1JSP7,NCBI_GP:CAL14068.1;Name=CAL14068.1;gbkey=CDS;gene=uspA;product=universal stress protein A;protein_id=CAL14068.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4414993	4415412	.	+	.	ID=id7086;Note=Pfam match to entry PF00582 Usp%2C Universal stress protein family%2C score 197.4%2C E-value 1.4e-56;gbkey=misc_feature;gene=uspA;inference=protein motif:PFAM:PF00582
AM286415.1	EMBL	gene	4415700	4417043	.	+	.	ID=gene4006;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=YE4051
AM286415.1	EMBL	CDS	4415700	4417043	.	+	0	ID=cds3899;Parent=gene4006;Dbxref=EnsemblGenomes-Gn:YE4051,EnsemblGenomes-Tr:CAL14069,GOA:A1JSP8,InterPro:IPR006095,InterPro:IPR006096,InterPro:IPR006097,InterPro:IPR014362,InterPro:IPR016040,UniProtKB/TrEMBL:A1JSP8,NCBI_GP:CAL14069.1;Name=CAL14069.1;gbkey=CDS;gene=gdhA;product=NADP-specific glutamate dehydrogenase;protein_id=CAL14069.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4415868	4416260	.	+	.	ID=id7087;Note=Pfam match to entry PF02812 GLFV_dehydrog_N%2CGlu/Leu/Phe/Val dehydrogenase%2C dimerisation domain%2C score 275.5%2C E-value 4.5e-80;gbkey=misc_feature;gene=gdhA;inference=protein motif:PFAM:PF02812
AM286415.1	EMBL	sequence_feature	4416063	4416104	.	+	.	ID=id7088;Note=PS00074 Glu / Leu / Phe / Val dehydrogenases active site.;gbkey=misc_feature;gene=gdhA;inference=protein motif:Prosite:PS00074
AM286415.1	EMBL	sequence_feature	4416303	4417034	.	+	.	ID=id7089;Note=Pfam match to entry PF00208 GLFV_dehydrog%2CGlutamate/Leucine/Phenylalanine/Valine dehydrogenase %2Cscore 407.1%2C E-value 1.1e-119;gbkey=misc_feature;gene=gdhA;inference=protein motif:PFAM:PF00208
AM286415.1	EMBL	gene	4417247	4418725	.	+	.	ID=gene4007;Name=YE4052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4052
AM286415.1	EMBL	CDS	4417247	4418725	.	+	0	ID=cds3900;Parent=gene4007;Dbxref=EnsemblGenomes-Gn:YE4052,EnsemblGenomes-Tr:CAL14070,GOA:A1JSQ0,InterPro:IPR001343,InterPro:IPR006026,InterPro:IPR011049,InterPro:IPR013858,InterPro:IPR018511,InterPro:IPR024079,UniProtKB/TrEMBL:A1JSQ0,NCBI_GP:CAL14070.1;Name=CAL14070.1;gbkey=CDS;product=metalloprotease;protein_id=CAL14070.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4417715	4417744	.	+	.	ID=id7090;Note=PS00142 Neutral zinc metallopeptidases%2Czinc-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00142
AM286415.1	EMBL	sequence_feature	4418150	4418203	.	+	.	ID=id7091;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 11.7%2C E-value 0.64;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	4418204	4418257	.	+	.	ID=id7092;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 19.2%2C E-value 0.0066;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	4418222	4418278	.	+	.	ID=id7093;Note=PS00330 Hemolysin-type calcium-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00330
AM286415.1	EMBL	sequence_feature	4418258	4418311	.	+	.	ID=id7094;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 25.6%2C E-value 7.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	4418303	4418359	.	+	.	ID=id7095;Note=PS00330 Hemolysin-type calcium-binding region signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00330
AM286415.1	EMBL	sequence_feature	4418312	4418365	.	+	.	ID=id7096;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 25.9%2C E-value 6.1e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	sequence_feature	4418366	4418419	.	+	.	ID=id7097;Note=Pfam match to entry PF00353 hemolysinCabind%2CHemolysin-type calcium-binding repeat (2 copies)%2C score 16.5%2C E-value 0.041;gbkey=misc_feature;inference=protein motif:PFAM:PF00353
AM286415.1	EMBL	gene	4418851	4419609	.	-	.	ID=gene4008;Name=YE4053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4053
AM286415.1	EMBL	CDS	4418851	4419609	.	-	0	ID=cds3901;Parent=gene4008;Dbxref=EnsemblGenomes-Gn:YE4053,EnsemblGenomes-Tr:CAL14071,GOA:A1JSQ2,InterPro:IPR007536,InterPro:IPR029063,NCBI_GP:CAL14071.1;Name=CAL14071.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14071.1;transl_table=11
AM286415.1	EMBL	gene	4419613	4421655	.	-	.	ID=gene4009;Name=opdA;gbkey=Gene;gene=opdA;gene_biotype=protein_coding;gene_synonym=prlC;locus_tag=YE4054
AM286415.1	EMBL	CDS	4419613	4421655	.	-	0	ID=cds3902;Parent=gene4009;Dbxref=EnsemblGenomes-Gn:YE4054,EnsemblGenomes-Tr:CAL14072,GOA:A1JSQ3,InterPro:IPR001567,InterPro:IPR024077,InterPro:IPR024079,InterPro:IPR024080,UniProtKB/TrEMBL:A1JSQ3,NCBI_GP:CAL14072.1;Name=CAL14072.1;gbkey=CDS;gene=opdA;product=oligopeptidase A;protein_id=CAL14072.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4419622	4420992	.	-	.	ID=id7098;Note=Pfam match to entry PF01432 Peptidase_M3%2C Peptidase family M3%2C score 775.1%2C E-value 1.8e-230;gbkey=misc_feature;gene=opdA;inference=protein motif:PFAM:PF01432
AM286415.1	EMBL	sequence_feature	4420231	4420260	.	-	.	ID=id7099;Note=PS00142 Neutral zinc metallopeptidases%2Czinc-binding region signature.;gbkey=misc_feature;gene=opdA;inference=protein motif:Prosite:PS00142
AM286415.1	EMBL	gene	4421992	4422834	.	+	.	ID=gene4010;Name=YE4055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4055
AM286415.1	EMBL	CDS	4421992	4422834	.	+	0	ID=cds3903;Parent=gene4010;Dbxref=EnsemblGenomes-Gn:YE4055,EnsemblGenomes-Tr:CAL14073,GOA:A1JSQ4,InterPro:IPR002052,InterPro:IPR007473,InterPro:IPR029063,UniProtKB/TrEMBL:A1JSQ4,NCBI_GP:CAL14073.1;Name=CAL14073.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14073.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4422472	4422492	.	+	.	ID=id7100;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	sequence_feature	4422712	4422732	.	+	.	ID=id7101;Note=PS00092 N-6 Adenine-specific DNA methylases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00092
AM286415.1	EMBL	gene	4423078	4424430	.	+	.	ID=gene4011;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=YE4057
AM286415.1	EMBL	CDS	4423078	4424430	.	+	0	ID=cds3904;Parent=gene4011;Dbxref=EnsemblGenomes-Gn:YE4057,EnsemblGenomes-Tr:CAL14074,GOA:A1JSQ6,InterPro:IPR001327,InterPro:IPR004099,InterPro:IPR006322,InterPro:IPR012999,InterPro:IPR013027,InterPro:IPR016156,InterPro:IPR023753,UniProtKB/TrEMBL:A1JSQ6,NCBI_GP:CAL14074.1;Name=CAL14074.1;gbkey=CDS;gene=gor;product=glutathione reductase;protein_id=CAL14074.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4423093	4424016	.	+	.	ID=id7102;Note=Pfam match to entry PF00070 pyr_redox%2C Pyridine nucleotide-disulphide oxidoreductase%2C score 301.9%2CE-value 5.1e-88;gbkey=misc_feature;gene=gor;inference=protein motif:PFAM:PF00070
AM286415.1	EMBL	sequence_feature	4423192	4423224	.	+	.	ID=id7103;Note=PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.;gbkey=misc_feature;gene=gor;inference=protein motif:Prosite:PS00076
AM286415.1	EMBL	sequence_feature	4424092	4424427	.	+	.	ID=id7104;Note=Pfam match to entry PF02852 pyr_redox_dim%2C Pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%2C score 179.4%2C E-value 3.9e-51;gbkey=misc_feature;gene=gor;inference=protein motif:PFAM:PF02852
AM286415.1	EMBL	gene	4424724	4427969	.	-	.	ID=gene4012;Name=yapE;gbkey=Gene;gene=yapE;gene_biotype=protein_coding;locus_tag=YE4059
AM286415.1	EMBL	CDS	4424724	4427969	.	-	0	ID=cds3905;Parent=gene4012;Dbxref=EnsemblGenomes-Gn:YE4059,EnsemblGenomes-Tr:CAL14075,GOA:A1JSQ7,InterPro:IPR004899,InterPro:IPR005546,InterPro:IPR006315,InterPro:IPR006626,InterPro:IPR011050,InterPro:IPR012332,UniProtKB/TrEMBL:A1JSQ7,NCBI_GP:CAL14075.1;Name=CAL14075.1;gbkey=CDS;gene=yapE;product=putative autotransporter protein;protein_id=CAL14075.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4424727	4425578	.	-	.	ID=id7105;Note=Pfam match to entry PF03797 Autotransporter%2CAutotransporter beta-domain%2C score 134.4%2C E-value 1.3e-37;gbkey=misc_feature;gene=yapE;inference=protein motif:PFAM:PF03797
AM286415.1	EMBL	sequence_feature	4425744	4426130	.	-	.	ID=id7106;Note=Pfam match to entry PF03212 Pertactin%2C Pertactin %2Cscore 28.6%2C E-value 1.6e-09;gbkey=misc_feature;gene=yapE;inference=protein motif:PFAM:PF03212
AM286415.1	EMBL	gene	4428381	4429370	.	+	.	ID=gene4013;Name=YE4060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4060
AM286415.1	EMBL	CDS	4428381	4429370	.	+	0	ID=cds3906;Parent=gene4013;Dbxref=EnsemblGenomes-Gn:YE4060,EnsemblGenomes-Tr:CAL14076,InterPro:IPR005274,InterPro:IPR017039,UniProtKB/TrEMBL:A1JSR6,NCBI_GP:CAL14076.1;Name=CAL14076.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL14076.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4428528	4429325	.	+	.	ID=id7107;Note=Pfam match to entry PF03631 Ribonuclease_BN%2CRibonuclease BN-like family%2C score 106.5%2C E-value 3.4e-29;gbkey=misc_feature;inference=protein motif:PFAM:PF03631
AM286415.1	EMBL	sequence_feature	4428567	4428635	.	+	.	ID=id7108;Note=6 probable transmembrane helices predicted for YE4060 by TMHMM2.0 at aa 63-85%2C 122-144%2C 174-196%2C 216-238%2C250-272 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4428744	4428812	.	+	.	ID=id7108;Note=6 probable transmembrane helices predicted for YE4060 by TMHMM2.0 at aa 63-85%2C 122-144%2C 174-196%2C 216-238%2C250-272 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4428900	4428968	.	+	.	ID=id7108;Note=6 probable transmembrane helices predicted for YE4060 by TMHMM2.0 at aa 63-85%2C 122-144%2C 174-196%2C 216-238%2C250-272 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4429026	4429094	.	+	.	ID=id7108;Note=6 probable transmembrane helices predicted for YE4060 by TMHMM2.0 at aa 63-85%2C 122-144%2C 174-196%2C 216-238%2C250-272 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4429128	4429196	.	+	.	ID=id7108;Note=6 probable transmembrane helices predicted for YE4060 by TMHMM2.0 at aa 63-85%2C 122-144%2C 174-196%2C 216-238%2C250-272 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4429239	4429307	.	+	.	ID=id7108;Note=6 probable transmembrane helices predicted for YE4060 by TMHMM2.0 at aa 63-85%2C 122-144%2C 174-196%2C 216-238%2C250-272 and 287-309;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	4429436	4430158	.	+	.	ID=gene4014;Name=cdh;gbkey=Gene;gene=cdh;gene_biotype=protein_coding;locus_tag=YE4061
AM286415.1	EMBL	CDS	4429436	4430158	.	+	0	ID=cds3907;Parent=gene4014;Dbxref=EnsemblGenomes-Gn:YE4061,EnsemblGenomes-Tr:CAL14077,GOA:A1JSR7,InterPro:IPR003763,InterPro:IPR011146,UniProtKB/TrEMBL:A1JSR7,NCBI_GP:CAL14077.1;Name=CAL14077.1;gbkey=CDS;gene=cdh;product=CDP-diacylglycerol pyrophosphatase;protein_id=CAL14077.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4429436	4430140	.	+	.	ID=id7109;Note=Pfam match to entry PF02611 CDH%2C CDP-diacylglycerol pyrophosphatase%2C score 328.2%2C E-value 6.3e-96;gbkey=misc_feature;gene=cdh;inference=protein motif:PFAM:PF02611
AM286415.1	EMBL	gene	4430163	4432283	.	-	.	ID=gene4015;Name=YE4062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4062
AM286415.1	EMBL	CDS	4430163	4432283	.	-	0	ID=cds3908;Parent=gene4015;Dbxref=EnsemblGenomes-Gn:YE4062,EnsemblGenomes-Tr:CAL14078,InterPro:IPR007844,UniProtKB/TrEMBL:A1JSR9,NCBI_GP:CAL14078.1;Name=CAL14078.1;gbkey=CDS;product=putative exported protein;protein_id=CAL14078.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4431984	4432007	.	-	.	ID=id7110;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4432206	4432265	.	-	.	ID=id7111;Note=1 probable transmembrane helix predicted for YE4062 by TMHMM2.0 at aa 7-26;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4432402	4433178	.	-	.	ID=gene4016;Name=YE4063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4063
AM286415.1	EMBL	CDS	4432402	4433178	.	-	0	ID=cds3909;Parent=gene4016;Dbxref=EnsemblGenomes-Gn:YE4063,EnsemblGenomes-Tr:CAL14079,InterPro:IPR001633,UniProtKB/TrEMBL:A1JSS1,NCBI_GP:CAL14079.1;Name=CAL14079.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14079.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4432435	4433127	.	-	.	ID=id7112;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score 7.0%2C E-value 4e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	gene	4433428	4433628	.	+	.	ID=gene4017;Name=YE4064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4064
AM286415.1	EMBL	CDS	4433428	4433628	.	+	0	ID=cds3910;Parent=gene4017;Dbxref=EnsemblGenomes-Gn:YE4064,EnsemblGenomes-Tr:CAL14080,GOA:A1JSS2,InterPro:IPR004370,InterPro:IPR014347,InterPro:IPR018191,UniProtKB/TrEMBL:A1JSS2,NCBI_GP:CAL14080.1;Name=CAL14080.1;gbkey=CDS;product=putative tautomerase;protein_id=CAL14080.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4433476	4433589	.	+	.	ID=id7113;Note=Pfam match to entry PF01361 Tautomerase%2CTautomerase enzyme%2C score 72.4%2C E-value 6.3e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF01361
AM286415.1	EMBL	gene	4433773	4434717	.	+	.	ID=gene4018;Name=kdgK;gbkey=Gene;gene=kdgK;gene_biotype=protein_coding;locus_tag=YE4065
AM286415.1	EMBL	CDS	4433773	4434717	.	+	0	ID=cds3911;Parent=gene4018;Dbxref=EnsemblGenomes-Gn:YE4065,EnsemblGenomes-Tr:CAL14081,GOA:A1JSS3,InterPro:IPR002173,InterPro:IPR011611,InterPro:IPR029056,UniProtKB/TrEMBL:A1JSS3,NCBI_GP:CAL14081.1;Name=CAL14081.1;gbkey=CDS;gene=kdgK;product=2-dehydro-3-deoxygluconokinase;protein_id=CAL14081.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4433779	4434705	.	+	.	ID=id7114;Note=Pfam match to entry PF00294 pfkB%2C pfkB family carbohydrate kinase%2C score 257.2%2C E-value 1.4e-74;gbkey=misc_feature;gene=kdgK;inference=protein motif:PFAM:PF00294
AM286415.1	EMBL	sequence_feature	4434556	4434597	.	+	.	ID=id7115;Note=PS00584 pfkB family of carbohydrate kinases signature 2.;gbkey=misc_feature;gene=kdgK;inference=protein motif:Prosite:PS00584
AM286415.1	EMBL	gene	4434877	4436382	.	-	.	ID=gene4019;Name=YE4066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4066
AM286415.1	EMBL	CDS	4434877	4436382	.	-	0	ID=cds3912;Parent=gene4019;Dbxref=EnsemblGenomes-Gn:YE4066,EnsemblGenomes-Tr:CAL14082,GOA:A1JSS4,InterPro:IPR007863,InterPro:IPR011237,InterPro:IPR011249,InterPro:IPR011765,UniProtKB/TrEMBL:A1JSS4,NCBI_GP:CAL14082.1;Name=CAL14082.1;gbkey=CDS;product=putative insulinase family protease;protein_id=CAL14082.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4435807	4436250	.	-	.	ID=id7116;Note=Pfam match to entry PF00675 Peptidase_M16%2CInsulinase (Peptidase family M16)%2C score 0.2%2C E-value 8.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF00675
AM286415.1	EMBL	gene	4436866	4438158	.	-	.	ID=gene4020;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=YE4067
AM286415.1	EMBL	CDS	4436866	4438158	.	-	0	ID=cds3913;Parent=gene4020;Dbxref=EnsemblGenomes-Gn:YE4067,EnsemblGenomes-Tr:CAL14083,GOA:A1JSS6,InterPro:IPR001991,InterPro:IPR018107,InterPro:IPR023954,NCBI_GP:CAL14083.1;Name=CAL14083.1;gbkey=CDS;gene=dctA;product=C4-dicarboxylate transport protein;protein_id=CAL14083.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4436956	4438134	.	-	.	ID=id7117;Note=Pfam match to entry PF00375 SDF%2CSodium:dicarboxylate symporter family%2C score 696.5%2CE-value 8.5e-207;gbkey=misc_feature;gene=dctA;inference=protein motif:PFAM:PF00375
AM286415.1	EMBL	sequence_feature	4438078	4438146	.	-	.	ID=id7118;Note=8 probable transmembrane helices predicted for YE4067 by TMHMM2.0 at aa 5-27%2C 47-64%2C 77-99%2C 141-163%2C184-206%2C 219-241%2C 289-311 and 351-373;gbkey=misc_feature;gene=dctA;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	4437967	4438020	.	-	.	ID=id7118;Note=8 probable transmembrane helices predicted for YE4067 by TMHMM2.0 at aa 5-27%2C 47-64%2C 77-99%2C 141-163%2C184-206%2C 219-241%2C 289-311 and 351-373;gbkey=misc_feature;gene=dctA;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	4437862	4437930	.	-	.	ID=id7118;Note=8 probable transmembrane helices predicted for YE4067 by TMHMM2.0 at aa 5-27%2C 47-64%2C 77-99%2C 141-163%2C184-206%2C 219-241%2C 289-311 and 351-373;gbkey=misc_feature;gene=dctA;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	4437670	4437738	.	-	.	ID=id7118;Note=8 probable transmembrane helices predicted for YE4067 by TMHMM2.0 at aa 5-27%2C 47-64%2C 77-99%2C 141-163%2C184-206%2C 219-241%2C 289-311 and 351-373;gbkey=misc_feature;gene=dctA;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	4437541	4437609	.	-	.	ID=id7118;Note=8 probable transmembrane helices predicted for YE4067 by TMHMM2.0 at aa 5-27%2C 47-64%2C 77-99%2C 141-163%2C184-206%2C 219-241%2C 289-311 and 351-373;gbkey=misc_feature;gene=dctA;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	4437436	4437504	.	-	.	ID=id7118;Note=8 probable transmembrane helices predicted for YE4067 by TMHMM2.0 at aa 5-27%2C 47-64%2C 77-99%2C 141-163%2C184-206%2C 219-241%2C 289-311 and 351-373;gbkey=misc_feature;gene=dctA;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	4437226	4437294	.	-	.	ID=id7118;Note=8 probable transmembrane helices predicted for YE4067 by TMHMM2.0 at aa 5-27%2C 47-64%2C 77-99%2C 141-163%2C184-206%2C 219-241%2C 289-311 and 351-373;gbkey=misc_feature;gene=dctA;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	4437040	4437108	.	-	.	ID=id7118;Note=8 probable transmembrane helices predicted for YE4067 by TMHMM2.0 at aa 5-27%2C 47-64%2C 77-99%2C 141-163%2C184-206%2C 219-241%2C 289-311 and 351-373;gbkey=misc_feature;gene=dctA;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	4437205	4437276	.	-	.	ID=id7119;Note=PS00714 Sodium:dicarboxylate symporter family signature 2.;gbkey=misc_feature;gene=dctA;inference=protein motif:Prosite:PS00714
AM286415.1	EMBL	sequence_feature	4438006	4438053	.	-	.	ID=id7120;Note=PS00713 Sodium:dicarboxylate symporter family signature 1.;gbkey=misc_feature;gene=dctA;inference=protein motif:Prosite:PS00713
AM286415.1	EMBL	gene	4438536	4439015	.	-	.	ID=gene4021;Name=YE4068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4068
AM286415.1	EMBL	CDS	4438536	4439015	.	-	0	ID=cds3914;Parent=gene4021;Dbxref=EnsemblGenomes-Gn:YE4068,EnsemblGenomes-Tr:CAL14084,GOA:A1JSS7,InterPro:IPR000421,InterPro:IPR008979,PDB:2JD9,PDB:2JDA,UniProtKB/TrEMBL:A1JSS7,NCBI_GP:CAL14084.1;Name=CAL14084.1;gbkey=CDS;product=putative exported protein;protein_id=CAL14084.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4438935	4439003	.	-	.	ID=id7121;Note=1 probable transmembrane helix predicted for YE4068 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4439140	4440858	.	-	.	ID=gene4022;Name=pelY;gbkey=Gene;gene=pelY;gene_biotype=protein_coding;locus_tag=YE4069
AM286415.1	EMBL	CDS	4439140	4440858	.	-	0	ID=cds3915;Parent=gene4022;Dbxref=EnsemblGenomes-Gn:YE4069,EnsemblGenomes-Tr:CAL14085,GOA:A1JSS8,InterPro:IPR010702,PDB:2V8I,PDB:2V8J,PDB:2V8K,UniProtKB/TrEMBL:A1JSS8,NCBI_GP:CAL14085.1;Name=CAL14085.1;gbkey=CDS;gene=pelY;product=periplasmic pectate lyase precursor;protein_id=CAL14085.1;transl_table=11
AM286415.1	EMBL	gene	4440935	4441639	.	-	.	ID=gene4023;Name=YE4070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4070
AM286415.1	EMBL	CDS	4440935	4441639	.	-	0	ID=cds3916;Parent=gene4023;Dbxref=EnsemblGenomes-Gn:YE4070,EnsemblGenomes-Tr:CAL14086,InterPro:IPR009331,UniProtKB/TrEMBL:A1JST0,NCBI_GP:CAL14086.1;Name=CAL14086.1;gbkey=CDS;product=putative exported protein;protein_id=CAL14086.1;transl_table=11
AM286415.1	EMBL	gene	4442362	4443891	.	-	.	ID=gene4024;Name=YE4071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4071
AM286415.1	EMBL	CDS	4442362	4443891	.	-	0	ID=cds3917;Parent=gene4024;Dbxref=EnsemblGenomes-Gn:YE4071,EnsemblGenomes-Tr:CAL14087,GOA:A1JST1,InterPro:IPR001633,InterPro:IPR003660,UniProtKB/TrEMBL:A1JST1,NCBI_GP:CAL14087.1;Name=CAL14087.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL14087.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4442392	4443129	.	-	.	ID=id7122;Note=Pfam match to entry PF00563 EAL%2C EAL domain%2C score 332.4%2C E-value 3.4e-97;gbkey=misc_feature;inference=protein motif:PFAM:PF00563
AM286415.1	EMBL	sequence_feature	4443190	4443411	.	-	.	ID=id7123;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 39.9%2C E-value 3.8e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	4443787	4443855	.	-	.	ID=id7124;Note=2 probable transmembrane helices predicted for YE4071 by TMHMM2.0 at aa 13-35 and 157-179;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4443355	4443423	.	-	.	ID=id7124;Note=2 probable transmembrane helices predicted for YE4071 by TMHMM2.0 at aa 13-35 and 157-179;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	4443923	4458188	.	+	.	ID=id7125;Note=cellulose biosynthetic operon;gbkey=misc_feature
AM286415.1	EMBL	gene	4444122	4447607	.	-	.	ID=gene4025;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=YE4072
AM286415.1	EMBL	CDS	4444122	4447607	.	-	0	ID=cds3918;Parent=gene4025;Dbxref=EnsemblGenomes-Gn:YE4072,EnsemblGenomes-Tr:CAL14088,GOA:A1JST3,InterPro:IPR008410,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR019734,UniProtKB/TrEMBL:A1JST3,NCBI_GP:CAL14088.1;Name=CAL14088.1;Note=Similar to SWALL:BCSC_ACEXY (SWALL:) (1302 aa) fasta scores: E(): 2.4e-23%2C 22.49 38d in 1276 aa%2C and to SWALL:YHJL_ECOLI (SWALL:) (1140 aa) fasta scores: E(): 0%2C54.75 38d in 1136 aa%2C and to Pseudomonas fluorescens cellulose synthase operon protein c precursor bcsC or wssE SWALL:AAL71845 (EMBL:AY074776) (1279 aa) fasta scores: E(): 3.5e-28%2C 25.11 38d in 1302 aa;gbkey=CDS;gene=bcsC;inference=similar to sequence:UniProtKB:;product=Probable BcsC protein involved in cellulose synthesis;protein_id=CAL14088.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4446114	4446215	.	-	.	ID=id7126;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 13.4%2C E-value 0.11;gbkey=misc_feature;gene=bcsC;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	sequence_feature	4446342	4446443	.	-	.	ID=id7127;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 23.4%2C E-value 0.00034;gbkey=misc_feature;gene=bcsC;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	sequence_feature	4446444	4446545	.	-	.	ID=id7128;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 6.0%2C E-value 0.67;gbkey=misc_feature;gene=bcsC;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	sequence_feature	4446588	4446689	.	-	.	ID=id7129;Note=Pfam match to entry PF00515 TPR%2C TPR Domain%2C score 17.1%2C E-value 0.028;gbkey=misc_feature;gene=bcsC;inference=protein motif:PFAM:PF00515
AM286415.1	EMBL	gene	4447589	4448716	.	-	.	ID=gene4026;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=YE4072A
AM286415.1	EMBL	CDS	4447589	4448716	.	-	0	ID=cds3919;Parent=gene4026;Dbxref=EnsemblGenomes-Gn:YE4072A,EnsemblGenomes-Tr:CAL14089,GOA:A1JST6,InterPro:IPR002037,InterPro:IPR008928,InterPro:IPR012341,InterPro:IPR019834,UniProtKB/TrEMBL:A1JST6,NCBI_GP:CAL14089.1;Name=CAL14089.1;Note=Similar to Escherichia coli endoglucanase precursor bcsZ or bcsC or b3531 SWALL:GUN_ECOLI (SWALL:P37651) (368 aa) fasta scores: E(): 2.4e-90%2C 58.79 38d in 364 aa%2C and to Pseudomonas fluorescens endoglucanase precursor bcsZ or wssD SWALL:Q8RSY9 (EMBL:AY074776) (436 aa) fasta scores: E(): 5.4e-35%2C 40.41 38d in 386 aa;gbkey=CDS;gene=bcsZ;inference=similar to sequence:UniProtKB:P37651;product=endoglucanase precursor (endo-1%2C4-beta-glucanase involved in cellulose degradation);protein_id=CAL14089.1;transl_table=11
AM286415.1	EMBL	gene	4448722	4451028	.	-	.	ID=gene4027;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=YE4073
AM286415.1	EMBL	CDS	4448722	4451028	.	-	0	ID=cds3920;Parent=gene4027;Dbxref=EnsemblGenomes-Gn:YE4073,EnsemblGenomes-Tr:CAL14090,GOA:A1JST7,InterPro:IPR003920,InterPro:IPR018513,UniProtKB/TrEMBL:A1JST7,NCBI_GP:CAL14090.1;Name=CAL14090.1;Note=Similar to Acetobacter xylinus cyclic di-gmp binding protein precursor bcsB SWALL:O82860 (EMBL:AB010645) (802 aa) fasta scores: E(): 3.9e-54%2C28.49 38d in 765 aa%2C and to Salmonella typhi cyclic di-gmp binding protein precursor bcsB or sty4182 SWALL:Q8Z290 (EMBL:AL627281) (766 aa) fasta scores: E(): 2.5e-187%2C61.53 38d in 767 aa%2C and to Pseudomonas fluorescens cyclic di-gmp binding protein bcsb or wssC SWALL:AAL71843 (EMBL:AY074776) (689 aa) fasta scores: E(): 3.6e-67%2C32.99 38d in 691 aa;gbkey=CDS;gene=bcsB;inference=similar to sequence:INSDC:AY074776;product=cyclic di-gmp binding protein precursor;protein_id=CAL14090.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4448767	4448835	.	-	.	ID=id7130;Note=1 probable transmembrane helix predicted for YE4073 by TMHMM2.0 at aa 732-754;gbkey=misc_feature;gene=bcsB;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	4449022	4450872	.	-	.	ID=id7131;Note=Pfam match to entry PF03170 BcsB%2C Bacterial cellulose synthase subunit%2C score 681.8%2C E-value 2.3e-202;gbkey=misc_feature;gene=bcsB;inference=protein motif:PFAM:PF03170
AM286415.1	EMBL	gene	4451036	4453663	.	-	.	ID=gene4028;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=YE4074
AM286415.1	EMBL	CDS	4451036	4453663	.	-	0	ID=cds3921;Parent=gene4028;Dbxref=EnsemblGenomes-Gn:YE4074,EnsemblGenomes-Tr:CAL14091,GOA:A1JST8,InterPro:IPR003919,InterPro:IPR009875,InterPro:IPR029044,UniProtKB/TrEMBL:A1JST8,NCBI_GP:CAL14091.1;Name=CAL14091.1;Note=Similar to Acetobacter xylinus cellulose synthase 1 catalytic subunit [udp-forming] bcsAI SWALL:Q9WX61 (EMBL:AB015802) (745 aa) fasta scores: E(): 9.7e-128%2C45.09 38d in 714 aa%2C and to SWALL:YHJO_ECOLI (SWALL:) (888 aa) fasta scores: E(): 0%2C 66.28 38d in 875 aa%2C and to Pseudomonas fluorescens cellulose synthase catalytic subunit [udp-forming] bcsA or wssB SWALL:AAL71842 (EMBL:AY074776) (739 aa) fasta scores: E(): 4.8e-155%2C53.17 38d in 694 aa%3B Highly similar to bcsA or wssB from amino acid position 120;gbkey=CDS;gene=bcsA;inference=similar to sequence:UniProtKB:;product=cellulose synthase 1 catalytic subunit [UDP-forming];protein_id=CAL14091.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4453526	4453594	.	-	.	ID=id7132;Note=10 probable transmembrane helices predicted for YE4074 by TMHMM2.0 at aa 24-46%2C 153-170%2C 174-193%2C 200-219%2C232-254%2C 530-552%2C 556-578%2C 642-661%2C 671-693 and 836-858;gbkey=misc_feature;gene=bcsA;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4453154	4453207	.	-	.	ID=id7132;Note=10 probable transmembrane helices predicted for YE4074 by TMHMM2.0 at aa 24-46%2C 153-170%2C 174-193%2C 200-219%2C232-254%2C 530-552%2C 556-578%2C 642-661%2C 671-693 and 836-858;gbkey=misc_feature;gene=bcsA;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4453085	4453144	.	-	.	ID=id7132;Note=10 probable transmembrane helices predicted for YE4074 by TMHMM2.0 at aa 24-46%2C 153-170%2C 174-193%2C 200-219%2C232-254%2C 530-552%2C 556-578%2C 642-661%2C 671-693 and 836-858;gbkey=misc_feature;gene=bcsA;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4453007	4453066	.	-	.	ID=id7132;Note=10 probable transmembrane helices predicted for YE4074 by TMHMM2.0 at aa 24-46%2C 153-170%2C 174-193%2C 200-219%2C232-254%2C 530-552%2C 556-578%2C 642-661%2C 671-693 and 836-858;gbkey=misc_feature;gene=bcsA;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4452902	4452970	.	-	.	ID=id7132;Note=10 probable transmembrane helices predicted for YE4074 by TMHMM2.0 at aa 24-46%2C 153-170%2C 174-193%2C 200-219%2C232-254%2C 530-552%2C 556-578%2C 642-661%2C 671-693 and 836-858;gbkey=misc_feature;gene=bcsA;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4452008	4452076	.	-	.	ID=id7132;Note=10 probable transmembrane helices predicted for YE4074 by TMHMM2.0 at aa 24-46%2C 153-170%2C 174-193%2C 200-219%2C232-254%2C 530-552%2C 556-578%2C 642-661%2C 671-693 and 836-858;gbkey=misc_feature;gene=bcsA;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4451930	4451998	.	-	.	ID=id7132;Note=10 probable transmembrane helices predicted for YE4074 by TMHMM2.0 at aa 24-46%2C 153-170%2C 174-193%2C 200-219%2C232-254%2C 530-552%2C 556-578%2C 642-661%2C 671-693 and 836-858;gbkey=misc_feature;gene=bcsA;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4451681	4451740	.	-	.	ID=id7132;Note=10 probable transmembrane helices predicted for YE4074 by TMHMM2.0 at aa 24-46%2C 153-170%2C 174-193%2C 200-219%2C232-254%2C 530-552%2C 556-578%2C 642-661%2C 671-693 and 836-858;gbkey=misc_feature;gene=bcsA;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4451585	4451653	.	-	.	ID=id7132;Note=10 probable transmembrane helices predicted for YE4074 by TMHMM2.0 at aa 24-46%2C 153-170%2C 174-193%2C 200-219%2C232-254%2C 530-552%2C 556-578%2C 642-661%2C 671-693 and 836-858;gbkey=misc_feature;gene=bcsA;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4451090	4451158	.	-	.	ID=id7132;Note=10 probable transmembrane helices predicted for YE4074 by TMHMM2.0 at aa 24-46%2C 153-170%2C 174-193%2C 200-219%2C232-254%2C 530-552%2C 556-578%2C 642-661%2C 671-693 and 836-858;gbkey=misc_feature;gene=bcsA;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	4451990	4452295	.	-	.	ID=id7133;Note=Pfam match to entry PF03552 Cellulose_synt%2CCellulose synthase%2C score 17.2%2C E-value 1e-05;gbkey=misc_feature;gene=bcsA;inference=protein motif:PFAM:PF03552
AM286415.1	EMBL	sequence_feature	4452314	4452829	.	-	.	ID=id7134;Note=Pfam match to entry PF00535 Glycos_transf_2%2CGlycosyl transferase%2C score 88.0%2C E-value 1.3e-23;gbkey=misc_feature;gene=bcsA;inference=protein motif:PFAM:PF00535
AM286415.1	EMBL	gene	4453660	4454397	.	-	.	ID=gene4029;Name=bcsF;gbkey=Gene;gene=bcsF;gene_biotype=protein_coding;locus_tag=YE4075
AM286415.1	EMBL	CDS	4453660	4454397	.	-	0	ID=cds3922;Parent=gene4029;Dbxref=EnsemblGenomes-Gn:YE4075,EnsemblGenomes-Tr:CAL14092,InterPro:IPR017746,InterPro:IPR027417,UniProtKB/TrEMBL:A1JST9,NCBI_GP:CAL14092.1;Name=CAL14092.1;Note=Similar to Salmonella typhi hypothetical protein yhjQ or sty4180 SWALL:Q8Z292 (EMBL:AL627281) (250 aa) fasta scores: E(): 4.8e-54%2C 58.13 38d in 246 aa%2C and to Pseudomonas fluorescens WssJ SWALL:AAL71850 (EMBL:AY074776) (324 aa) fasta scores: E(): 1.5e-13%2C28.76 38d in 226 aa;gbkey=CDS;gene=bcsF;inference=similar to sequence:INSDC:AY074776;product=conserved hypothetical protein;protein_id=CAL14092.1;transl_table=11
AM286415.1	EMBL	gene	4454401	4454592	.	-	.	ID=gene4030;Name=YE4076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4076
AM286415.1	EMBL	CDS	4454401	4454592	.	-	0	ID=cds3923;Parent=gene4030;Dbxref=EnsemblGenomes-Gn:YE4076,EnsemblGenomes-Tr:CAL14093,InterPro:IPR024487,UniProtKB/TrEMBL:A1JSU0,NCBI_GP:CAL14093.1;Name=CAL14093.1;gbkey=CDS;product=Hypothetical protein;protein_id=CAL14093.1;transl_table=11
AM286415.1	EMBL	gene	4454789	4456348	.	+	.	ID=gene4031;Name=bcsE;gbkey=Gene;gene=bcsE;gene_biotype=protein_coding;locus_tag=YE4077
AM286415.1	EMBL	CDS	4454789	4456348	.	+	0	ID=cds3924;Parent=gene4031;Dbxref=EnsemblGenomes-Gn:YE4077,EnsemblGenomes-Tr:CAL14094,InterPro:IPR017745,UniProtKB/TrEMBL:A1JSU1,NCBI_GP:CAL14094.1;Name=CAL14094.1;Note=Similar to Salmonella typhimurium putative cytoplasmic protein yhjS or stm3622 or bcsE SWALL:CAC86200 (EMBL:AE008867) (523 aa) fasta scores: E(): 2.3e-91%2C45.72 38d in 514 aa%2C and to Escherichia coli hypothetical protein yhjs or b3536 SWALL:YHJS_ECOLI (SWALL:P37657) (523 aa) fasta scores: E(): 3.9e-87%2C 44.37 38d in 507 aa;gbkey=CDS;gene=bcsE;inference=similar to sequence:UniProtKB:P37657;product=conserved hypothetical protein;protein_id=CAL14094.1;transl_table=11
AM286415.1	EMBL	gene	4456536	4458188	.	+	.	ID=gene4032;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=YE4078
AM286415.1	EMBL	CDS	4456536	4458188	.	+	0	ID=cds3925;Parent=gene4032;Dbxref=EnsemblGenomes-Gn:YE4078,EnsemblGenomes-Tr:CAL14095,InterPro:IPR017744,UniProtKB/TrEMBL:A1JSU3,NCBI_GP:CAL14095.1;Name=CAL14095.1;Note=Similar to Salmonella typhimurium%2C and Salmonella typhi putative inner membrane protein yhju or stm3624 or sty4176 or bcsG SWALL:CAC86202 (EMBL:AE008867) (559 aa) fasta scores: E(): 7.8e-141%2C 62.79 38d in 559 aa%2C and to Escherichia coli hypothetical protein yhju yhju or b3538 SWALL:YHJU_ECOLI (SWALL:P37659) (559 aa) fasta scores: E(): 1.1e-138%2C 62.52 38d in 547 aa;gbkey=CDS;gene=bcsG;inference=similar to sequence:UniProtKB:P37659;product=Putative inner membrane protein possibly involved in cellulose synthesis;protein_id=CAL14095.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4456593	4456652	.	+	.	ID=id7135;Note=5 probable transmembrane helices predicted for YE4078 by TMHMM2.0 at aa 20-39%2C 43-60%2C 67-84%2C 112-131 and 138-160;gbkey=misc_feature;gene=bcsG;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4456662	4456715	.	+	.	ID=id7135;Note=5 probable transmembrane helices predicted for YE4078 by TMHMM2.0 at aa 20-39%2C 43-60%2C 67-84%2C 112-131 and 138-160;gbkey=misc_feature;gene=bcsG;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4456734	4456787	.	+	.	ID=id7135;Note=5 probable transmembrane helices predicted for YE4078 by TMHMM2.0 at aa 20-39%2C 43-60%2C 67-84%2C 112-131 and 138-160;gbkey=misc_feature;gene=bcsG;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4456869	4456928	.	+	.	ID=id7135;Note=5 probable transmembrane helices predicted for YE4078 by TMHMM2.0 at aa 20-39%2C 43-60%2C 67-84%2C 112-131 and 138-160;gbkey=misc_feature;gene=bcsG;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4456947	4457015	.	+	.	ID=id7135;Note=5 probable transmembrane helices predicted for YE4078 by TMHMM2.0 at aa 20-39%2C 43-60%2C 67-84%2C 112-131 and 138-160;gbkey=misc_feature;gene=bcsG;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	4458531	4459388	.	-	.	ID=gene4033;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;gene_synonym=dppE;locus_tag=YE4079
AM286415.1	EMBL	CDS	4458531	4459388	.	-	0	ID=cds3926;Parent=gene4033;Dbxref=EnsemblGenomes-Gn:YE4079,EnsemblGenomes-Tr:CAL14096,GOA:A1JSU4,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010066,InterPro:IPR013563,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSU4,NCBI_GP:CAL14096.1;Name=CAL14096.1;gbkey=CDS;gene=dppF;product=dipeptide transport ATP-binding protein;protein_id=CAL14096.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4458825	4459388	.	-	.	ID=id7136;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 193.5%2C E-value 2.2e-55;gbkey=misc_feature;gene=dppF;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4459011	4459055	.	-	.	ID=id7137;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=dppF;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	4459353	4459376	.	-	.	ID=id7138;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=dppF;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4459550	4460530	.	-	.	ID=gene4034;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=YE4080
AM286415.1	EMBL	CDS	4459550	4460530	.	-	0	ID=cds3927;Parent=gene4034;Dbxref=EnsemblGenomes-Gn:YE4080,EnsemblGenomes-Tr:CAL14097,GOA:A1JSU6,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR010066,InterPro:IPR013563,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JSU6,NCBI_GP:CAL14097.1;Name=CAL14097.1;gbkey=CDS;gene=dppD;product=dipeptide transport ATP-binding protein;protein_id=CAL14097.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4459841	4460434	.	-	.	ID=id7139;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 211.1%2C E-value 1.1e-60;gbkey=misc_feature;gene=dppD;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4460027	4460071	.	-	.	ID=id7140;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=dppD;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	4460390	4460413	.	-	.	ID=id7141;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=dppD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4460544	4461446	.	-	.	ID=gene4035;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=YE4081
AM286415.1	EMBL	CDS	4460544	4461446	.	-	0	ID=cds3928;Parent=gene4035;Dbxref=EnsemblGenomes-Gn:YE4081,EnsemblGenomes-Tr:CAL14098,GOA:A1JSU7,InterPro:IPR000515,InterPro:IPR025966,UniProtKB/TrEMBL:A1JSU7,NCBI_GP:CAL14098.1;Name=CAL14098.1;gbkey=CDS;gene=dppC;product=dipeptide transport system permease protein;protein_id=CAL14098.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4461288	4461356	.	-	.	ID=id7142;Note=5 probable transmembrane helices predicted for YE4081 by TMHMM2.0 at aa 31-53%2C 103-125%2C 140-162%2C 210-232 and 265-287;gbkey=misc_feature;gene=dppC;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4461072	4461140	.	-	.	ID=id7142;Note=5 probable transmembrane helices predicted for YE4081 by TMHMM2.0 at aa 31-53%2C 103-125%2C 140-162%2C 210-232 and 265-287;gbkey=misc_feature;gene=dppC;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4460961	4461029	.	-	.	ID=id7142;Note=5 probable transmembrane helices predicted for YE4081 by TMHMM2.0 at aa 31-53%2C 103-125%2C 140-162%2C 210-232 and 265-287;gbkey=misc_feature;gene=dppC;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4460751	4460819	.	-	.	ID=id7142;Note=5 probable transmembrane helices predicted for YE4081 by TMHMM2.0 at aa 31-53%2C 103-125%2C 140-162%2C 210-232 and 265-287;gbkey=misc_feature;gene=dppC;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4460586	4460654	.	-	.	ID=id7142;Note=5 probable transmembrane helices predicted for YE4081 by TMHMM2.0 at aa 31-53%2C 103-125%2C 140-162%2C 210-232 and 265-287;gbkey=misc_feature;gene=dppC;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	4460667	4460897	.	-	.	ID=id7143;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 30.3%2C E-value 3e-06;gbkey=misc_feature;gene=dppC;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	gene	4461457	4462476	.	-	.	ID=gene4036;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=YE4082
AM286415.1	EMBL	CDS	4461457	4462476	.	-	0	ID=cds3929;Parent=gene4036;Dbxref=EnsemblGenomes-Gn:YE4082,EnsemblGenomes-Tr:CAL14099,GOA:A1JSU8,InterPro:IPR000515,UniProtKB/TrEMBL:A1JSU8,NCBI_GP:CAL14099.1;Name=CAL14099.1;gbkey=CDS;gene=dppB;product=dipeptide transport system permease protein;protein_id=CAL14099.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4462384	4462452	.	-	.	ID=id7144;Note=6 probable transmembrane helices predicted for YE4082 by TMHMM2.0 at aa 9-31%2C 99-121%2C 134-156%2C 202-221%2C258-280 and 309-331;gbkey=misc_feature;gene=dppB;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4462114	4462182	.	-	.	ID=id7144;Note=6 probable transmembrane helices predicted for YE4082 by TMHMM2.0 at aa 9-31%2C 99-121%2C 134-156%2C 202-221%2C258-280 and 309-331;gbkey=misc_feature;gene=dppB;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4462009	4462077	.	-	.	ID=id7144;Note=6 probable transmembrane helices predicted for YE4082 by TMHMM2.0 at aa 9-31%2C 99-121%2C 134-156%2C 202-221%2C258-280 and 309-331;gbkey=misc_feature;gene=dppB;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4461814	4461873	.	-	.	ID=id7144;Note=6 probable transmembrane helices predicted for YE4082 by TMHMM2.0 at aa 9-31%2C 99-121%2C 134-156%2C 202-221%2C258-280 and 309-331;gbkey=misc_feature;gene=dppB;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4461637	4461705	.	-	.	ID=id7144;Note=6 probable transmembrane helices predicted for YE4082 by TMHMM2.0 at aa 9-31%2C 99-121%2C 134-156%2C 202-221%2C258-280 and 309-331;gbkey=misc_feature;gene=dppB;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4461484	4461552	.	-	.	ID=id7144;Note=6 probable transmembrane helices predicted for YE4082 by TMHMM2.0 at aa 9-31%2C 99-121%2C 134-156%2C 202-221%2C258-280 and 309-331;gbkey=misc_feature;gene=dppB;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	4461580	4461795	.	-	.	ID=id7145;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 34.6%2C E-value 1.4e-07;gbkey=misc_feature;gene=dppB;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	4461706	4461792	.	-	.	ID=id7146;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=dppB;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	4462836	4464443	.	-	.	ID=gene4037;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=YE4083
AM286415.1	EMBL	CDS	4462836	4464443	.	-	0	ID=cds3930;Parent=gene4037;Dbxref=EnsemblGenomes-Gn:YE4083,EnsemblGenomes-Tr:CAL14100,GOA:A1JSV0,InterPro:IPR000914,InterPro:IPR023765,UniProtKB/TrEMBL:A1JSV0,NCBI_GP:CAL14100.1;Name=CAL14100.1;gbkey=CDS;gene=dppA;product=periplasmic dipeptide transport protein;protein_id=CAL14100.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4462842	4464443	.	-	.	ID=id7147;Note=Pfam match to entry PF00496 SBP_bac_5%2C Bacterial extracellular solute-binding proteins%2C family 5%2C score 864.9%2C E-value 1.7e-257;gbkey=misc_feature;gene=dppA;inference=protein motif:PFAM:PF00496
AM286415.1	EMBL	sequence_feature	4464141	4464209	.	-	.	ID=id7148;Note=PS01040 Bacterial extracellular solute-binding proteins%2C family 5 signature.;gbkey=misc_feature;gene=dppA;inference=protein motif:Prosite:PS01040
AM286415.1	EMBL	gene	4465126	4466508	.	-	.	ID=gene4038;Name=YE4084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4084
AM286415.1	EMBL	CDS	4465126	4466508	.	-	0	ID=cds3931;Parent=gene4038;Dbxref=EnsemblGenomes-Gn:YE4084,EnsemblGenomes-Tr:CAL14101,InterPro:IPR008638,InterPro:IPR011050,InterPro:IPR012334,UniProtKB/TrEMBL:A1JSV1,NCBI_GP:CAL14101.1;Name=CAL14101.1;gbkey=CDS;product=putative exported protein;protein_id=CAL14101.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4466428	4466496	.	-	.	ID=id7149;Note=1 probable transmembrane helix predicted for YE4084 by TMHMM2.0 at aa 5-27;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4466537	4468162	.	-	.	ID=gene4039;Name=YE4085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4085
AM286415.1	EMBL	CDS	4466537	4468162	.	-	0	ID=cds3932;Parent=gene4039;Dbxref=EnsemblGenomes-Gn:YE4085,EnsemblGenomes-Tr:CAL14102,GOA:A1JSV3,InterPro:IPR005565,InterPro:IPR013686,InterPro:IPR027282,UniProtKB/TrEMBL:A1JSV3,NCBI_GP:CAL14102.1;Name=CAL14102.1;gbkey=CDS;product=putative hemolysin activator protein;protein_id=CAL14102.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4466540	4468126	.	-	.	ID=id7150;Note=Pfam match to entry PF03865 HlyB%2C Hemolysin activator HlyB%2C score -203.0%2C E-value 3.3e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF03865
AM286415.1	EMBL	sequence_feature	4468049	4468102	.	-	.	ID=id7151;Note=1 probable transmembrane helix predicted for YE4085 by TMHMM2.0 at aa 21-38;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4468292	4469404	.	-	.	ID=gene4040;Name=YE4086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4086
AM286415.1	EMBL	CDS	4468292	4469404	.	-	0	ID=cds3933;Parent=gene4040;Dbxref=EnsemblGenomes-Gn:YE4086,EnsemblGenomes-Tr:CAL14103,InterPro:IPR008638,InterPro:IPR011050,InterPro:IPR012334,UniProtKB/TrEMBL:A1JSV4,NCBI_GP:CAL14103.1;Name=CAL14103.1;Note=Similar to Yersinia pestis putative exported protein ypo4006 or y3823 SWALL:Q8ZA16 (EMBL:AJ414160) (463 aa) fasta scores: E(): 4.2e-44%2C 46.51 38d in 344 aa. Also weakly similar in parts to many hemagglutinin/hemolysin-related proteins including: Neisseria meningitidis nmb1779 SWALL:Q9JY23 (EMBL:AE002527) (1995 aa) fasta scores: E(): 1.9e-13%2C33.12 38d in 317 aa and to Serratia marcescens hemolysin precursor ShlA SWALL:HLYA_SERMA (SWALL:P15320) (1608 aa) fasta scores: E(): 4.5e-11%2C 26.01 38d in 319 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P15320;product=putative exported protein;protein_id=CAL14103.1;transl_table=11
AM286415.1	EMBL	gene	4469630	4469706	.	-	.	ID=gene4041;Name=tRNA-Pro (TGG);gbkey=Gene;gene=tRNA-Pro (TGG);gene_biotype=tRNA
AM286415.1	EMBL	tRNA	4469630	4469706	.	-	.	ID=rna144;Parent=gene4041;gbkey=tRNA;gene=tRNA-Pro (TGG);product=tRNA-Pro
AM286415.1	EMBL	exon	4469630	4469706	.	-	.	ID=id7152;Parent=rna144;gbkey=tRNA;gene=tRNA-Pro (TGG);product=tRNA-Pro
AM286415.1	EMBL	gene	4469823	4471154	.	-	.	ID=gene4042;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=YE4087
AM286415.1	EMBL	CDS	4469823	4471154	.	-	0	ID=cds3934;Parent=gene4042;Dbxref=EnsemblGenomes-Gn:YE4087,EnsemblGenomes-Tr:CAL14104,GOA:A1JSV6,InterPro:IPR000849,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JSV6,NCBI_GP:CAL14104.1;Name=CAL14104.1;gbkey=CDS;gene=uhpC;product=putative regulatory protein;protein_id=CAL14104.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4470984	4471052	.	-	.	ID=id7153;Note=10 probable transmembrane helices predicted for YE4087 by TMHMM2.0 at aa 35-57%2C 67-89%2C 96-127%2C 181-203%2C251-270%2C 285-307%2C 320-339%2C 344-366%2C 379-401 and 406-428;gbkey=misc_feature;gene=uhpC;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4470888	4470956	.	-	.	ID=id7153;Note=10 probable transmembrane helices predicted for YE4087 by TMHMM2.0 at aa 35-57%2C 67-89%2C 96-127%2C 181-203%2C251-270%2C 285-307%2C 320-339%2C 344-366%2C 379-401 and 406-428;gbkey=misc_feature;gene=uhpC;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4470774	4470869	.	-	.	ID=id7153;Note=10 probable transmembrane helices predicted for YE4087 by TMHMM2.0 at aa 35-57%2C 67-89%2C 96-127%2C 181-203%2C251-270%2C 285-307%2C 320-339%2C 344-366%2C 379-401 and 406-428;gbkey=misc_feature;gene=uhpC;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4470546	4470614	.	-	.	ID=id7153;Note=10 probable transmembrane helices predicted for YE4087 by TMHMM2.0 at aa 35-57%2C 67-89%2C 96-127%2C 181-203%2C251-270%2C 285-307%2C 320-339%2C 344-366%2C 379-401 and 406-428;gbkey=misc_feature;gene=uhpC;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4470345	4470404	.	-	.	ID=id7153;Note=10 probable transmembrane helices predicted for YE4087 by TMHMM2.0 at aa 35-57%2C 67-89%2C 96-127%2C 181-203%2C251-270%2C 285-307%2C 320-339%2C 344-366%2C 379-401 and 406-428;gbkey=misc_feature;gene=uhpC;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4470234	4470302	.	-	.	ID=id7153;Note=10 probable transmembrane helices predicted for YE4087 by TMHMM2.0 at aa 35-57%2C 67-89%2C 96-127%2C 181-203%2C251-270%2C 285-307%2C 320-339%2C 344-366%2C 379-401 and 406-428;gbkey=misc_feature;gene=uhpC;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4470138	4470197	.	-	.	ID=id7153;Note=10 probable transmembrane helices predicted for YE4087 by TMHMM2.0 at aa 35-57%2C 67-89%2C 96-127%2C 181-203%2C251-270%2C 285-307%2C 320-339%2C 344-366%2C 379-401 and 406-428;gbkey=misc_feature;gene=uhpC;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4470057	4470125	.	-	.	ID=id7153;Note=10 probable transmembrane helices predicted for YE4087 by TMHMM2.0 at aa 35-57%2C 67-89%2C 96-127%2C 181-203%2C251-270%2C 285-307%2C 320-339%2C 344-366%2C 379-401 and 406-428;gbkey=misc_feature;gene=uhpC;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4469952	4470020	.	-	.	ID=id7153;Note=10 probable transmembrane helices predicted for YE4087 by TMHMM2.0 at aa 35-57%2C 67-89%2C 96-127%2C 181-203%2C251-270%2C 285-307%2C 320-339%2C 344-366%2C 379-401 and 406-428;gbkey=misc_feature;gene=uhpC;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4469871	4469939	.	-	.	ID=id7153;Note=10 probable transmembrane helices predicted for YE4087 by TMHMM2.0 at aa 35-57%2C 67-89%2C 96-127%2C 181-203%2C251-270%2C 285-307%2C 320-339%2C 344-366%2C 379-401 and 406-428;gbkey=misc_feature;gene=uhpC;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	4469892	4469924	.	-	.	ID=id7154;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=uhpC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4470915	4470947	.	-	.	ID=id7155;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=uhpC;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4471248	4472777	.	-	.	ID=gene4043;Name=uhpB;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=YE4088
AM286415.1	EMBL	CDS	4471248	4472777	.	-	0	ID=cds3935;Parent=gene4043;Dbxref=EnsemblGenomes-Gn:YE4088,EnsemblGenomes-Tr:CAL14105,GOA:A1JSV7,InterPro:IPR003594,InterPro:IPR007895,InterPro:IPR011712,UniProtKB/TrEMBL:A1JSV7,NCBI_GP:CAL14105.1;Name=CAL14105.1;gbkey=CDS;gene=uhpB;product=two-component system%2C sensor kinase;protein_id=CAL14105.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4471272	4471541	.	-	.	ID=id7156;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 47.2%2C E-value 2.4e-11;gbkey=misc_feature;gene=uhpB;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	sequence_feature	4472697	4472765	.	-	.	ID=id7157;Note=7 probable transmembrane helices predicted for YE4088 by TMHMM2.0 at aa 5-27%2C 80-102%2C 115-137%2C 142-164%2C184-206%2C 226-248 and 260-279;gbkey=misc_feature;gene=uhpB;inference=protein motif:TMHMM:2.0;part=1/7
AM286415.1	EMBL	sequence_feature	4472472	4472540	.	-	.	ID=id7157;Note=7 probable transmembrane helices predicted for YE4088 by TMHMM2.0 at aa 5-27%2C 80-102%2C 115-137%2C 142-164%2C184-206%2C 226-248 and 260-279;gbkey=misc_feature;gene=uhpB;inference=protein motif:TMHMM:2.0;part=2/7
AM286415.1	EMBL	sequence_feature	4472367	4472435	.	-	.	ID=id7157;Note=7 probable transmembrane helices predicted for YE4088 by TMHMM2.0 at aa 5-27%2C 80-102%2C 115-137%2C 142-164%2C184-206%2C 226-248 and 260-279;gbkey=misc_feature;gene=uhpB;inference=protein motif:TMHMM:2.0;part=3/7
AM286415.1	EMBL	sequence_feature	4472286	4472354	.	-	.	ID=id7157;Note=7 probable transmembrane helices predicted for YE4088 by TMHMM2.0 at aa 5-27%2C 80-102%2C 115-137%2C 142-164%2C184-206%2C 226-248 and 260-279;gbkey=misc_feature;gene=uhpB;inference=protein motif:TMHMM:2.0;part=4/7
AM286415.1	EMBL	sequence_feature	4472160	4472228	.	-	.	ID=id7157;Note=7 probable transmembrane helices predicted for YE4088 by TMHMM2.0 at aa 5-27%2C 80-102%2C 115-137%2C 142-164%2C184-206%2C 226-248 and 260-279;gbkey=misc_feature;gene=uhpB;inference=protein motif:TMHMM:2.0;part=5/7
AM286415.1	EMBL	sequence_feature	4472034	4472102	.	-	.	ID=id7157;Note=7 probable transmembrane helices predicted for YE4088 by TMHMM2.0 at aa 5-27%2C 80-102%2C 115-137%2C 142-164%2C184-206%2C 226-248 and 260-279;gbkey=misc_feature;gene=uhpB;inference=protein motif:TMHMM:2.0;part=6/7
AM286415.1	EMBL	sequence_feature	4471941	4472000	.	-	.	ID=id7157;Note=7 probable transmembrane helices predicted for YE4088 by TMHMM2.0 at aa 5-27%2C 80-102%2C 115-137%2C 142-164%2C184-206%2C 226-248 and 260-279;gbkey=misc_feature;gene=uhpB;inference=protein motif:TMHMM:2.0;part=7/7
AM286415.1	EMBL	gene	4472774	4473364	.	-	.	ID=gene4044;Name=uhpA;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=YE4089
AM286415.1	EMBL	CDS	4472774	4473364	.	-	0	ID=cds3936;Parent=gene4044;Dbxref=EnsemblGenomes-Gn:YE4089,EnsemblGenomes-Tr:CAL14106,GOA:A1JSV9,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,InterPro:IPR016032,UniProtKB/TrEMBL:A1JSV9,NCBI_GP:CAL14106.1;Name=CAL14106.1;gbkey=CDS;gene=uhpA;product=two-component system response regulator;protein_id=CAL14106.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4472777	4472959	.	-	.	ID=id7158;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 73.2%2C E-value 3.5e-19;gbkey=misc_feature;gene=uhpA;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	4472825	4472908	.	-	.	ID=id7159;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;gene=uhpA;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	sequence_feature	4473002	4473358	.	-	.	ID=id7160;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 114.6%2C E-value 1.2e-31;gbkey=misc_feature;gene=uhpA;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	gene	4473476	4475167	.	-	.	ID=gene4045;Name=yhjW;gbkey=Gene;gene=yhjW;gene_biotype=protein_coding;locus_tag=YE4090
AM286415.1	EMBL	CDS	4473476	4475167	.	-	0	ID=cds3937;Parent=gene4045;Dbxref=EnsemblGenomes-Gn:YE4090,EnsemblGenomes-Tr:CAL14107,GOA:A1JSW0,InterPro:IPR000917,InterPro:IPR012549,InterPro:IPR017849,InterPro:IPR017850,UniProtKB/TrEMBL:A1JSW0,NCBI_GP:CAL14107.1;Name=CAL14107.1;gbkey=CDS;gene=yhjW;product=putative membrane protein;protein_id=CAL14107.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4473497	4475149	.	-	.	ID=id7161;Note=Pfam match to entry PF02418 DUF146%2C Integral membrane protein of unknown function%2C score 516.6%2CE-value 1.1e-152;gbkey=misc_feature;gene=yhjW;inference=protein motif:PFAM:PF02418
AM286415.1	EMBL	sequence_feature	4473602	4473625	.	-	.	ID=id7162;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=yhjW;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4475075	4475134	.	-	.	ID=id7163;Note=5 probable transmembrane helices predicted for YE4090 by TMHMM2.0 at aa 12-31%2C 46-68%2C 81-103%2C 118-140 and 161-178;gbkey=misc_feature;gene=yhjW;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4474964	4475032	.	-	.	ID=id7163;Note=5 probable transmembrane helices predicted for YE4090 by TMHMM2.0 at aa 12-31%2C 46-68%2C 81-103%2C 118-140 and 161-178;gbkey=misc_feature;gene=yhjW;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4474859	4474927	.	-	.	ID=id7163;Note=5 probable transmembrane helices predicted for YE4090 by TMHMM2.0 at aa 12-31%2C 46-68%2C 81-103%2C 118-140 and 161-178;gbkey=misc_feature;gene=yhjW;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4474748	4474816	.	-	.	ID=id7163;Note=5 probable transmembrane helices predicted for YE4090 by TMHMM2.0 at aa 12-31%2C 46-68%2C 81-103%2C 118-140 and 161-178;gbkey=misc_feature;gene=yhjW;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4474634	4474687	.	-	.	ID=id7163;Note=5 probable transmembrane helices predicted for YE4090 by TMHMM2.0 at aa 12-31%2C 46-68%2C 81-103%2C 118-140 and 161-178;gbkey=misc_feature;gene=yhjW;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	gene	4475427	4475852	.	-	.	ID=gene4046;Name=YE4091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4091
AM286415.1	EMBL	CDS	4475427	4475852	.	-	0	ID=cds3938;Parent=gene4046;Dbxref=EnsemblGenomes-Gn:YE4091,EnsemblGenomes-Tr:CAL14108,GOA:A1JSW2,InterPro:IPR003718,InterPro:IPR015946,InterPro:IPR019953,UniProtKB/TrEMBL:A1JSW2,NCBI_GP:CAL14108.1;Name=CAL14108.1;Note=Similar to Ralstonia solanacearum probable organic hydroperoxide resistance protein ohr or rsp1107 or rs02615 SWALL:Q8XQW1 (EMBL:AL646082) (141 aa) fasta scores: E(): 4.3e-36%2C 67.85 38d in 140 aa%2C and to Acinetobacter calcoaceticus hypothetical 15.2 kDa protein in xcpr 3'region SWALL:YXC2_ACICA (SWALL:P70736) (143 aa) fasta scores: E(): 1.5e-34%2C 70 38d in 140 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P70736;product=putative osmotic/stress related protein;protein_id=CAL14108.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4475430	4475825	.	-	.	ID=id7164;Note=Pfam match to entry PF02566 OsmC%2C OsmC-like protein%2C score 151.7%2C E-value 8.5e-43;gbkey=misc_feature;inference=protein motif:PFAM:PF02566
AM286415.1	EMBL	gene	4476124	4477587	.	-	.	ID=gene4047;Name=YE4092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4092
AM286415.1	EMBL	CDS	4476124	4477587	.	-	0	ID=cds3939;Parent=gene4047;Dbxref=EnsemblGenomes-Gn:YE4092,EnsemblGenomes-Tr:CAL14109,InterPro:IPR029058,UniProtKB/TrEMBL:A1JSW3,NCBI_GP:CAL14109.1;Name=CAL14109.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL14109.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4477498	4477551	.	-	.	ID=id7165;Note=1 probable transmembrane helix predicted for YE4092 by TMHMM2.0 at aa 13-30;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4477855	4479252	.	-	.	ID=gene4048;Name=YE4093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4093
AM286415.1	EMBL	CDS	4477855	4479252	.	-	0	ID=cds3940;Parent=gene4048;Dbxref=EnsemblGenomes-Gn:YE4093,EnsemblGenomes-Tr:CAL14110,GOA:A1JSW5,InterPro:IPR002293,InterPro:IPR004840,InterPro:IPR004841,UniProtKB/TrEMBL:A1JSW5,NCBI_GP:CAL14110.1;Name=CAL14110.1;gbkey=CDS;product=amino acid permease;protein_id=CAL14110.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4477906	4479231	.	-	.	ID=id7166;Note=Pfam match to entry PF00324 aa_permeases%2C Amino acid permease%2C score 541.4%2C E-value 3.9e-160;gbkey=misc_feature;inference=protein motif:PFAM:PF00324
AM286415.1	EMBL	sequence_feature	4479151	4479219	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	4479064	4479123	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	4478938	4479006	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	4478812	4478880	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	4478725	4478793	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	4478590	4478658	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	4478461	4478529	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	4478350	4478418	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	4478194	4478262	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	4478116	4478184	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	4477990	4478058	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	4477909	4477977	.	-	.	ID=id7167;Note=12 probable transmembrane helices predicted for YE4093 by TMHMM2.0 at aa 12-34%2C 44-63%2C 83-105%2C 125-147%2C154-176%2C 199-221%2C 242-264%2C 279-301%2C 331-353%2C 357-379%2C399-421 and 426-448;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	4479040	4479132	.	-	.	ID=id7168;Note=PS00218 Amino acid permeases signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00218
AM286415.1	EMBL	gene	4479362	4480885	.	-	.	ID=gene4049;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=YE4094
AM286415.1	EMBL	CDS	4479362	4480885	.	-	0	ID=cds3941;Parent=gene4049;Dbxref=EnsemblGenomes-Gn:YE4094,EnsemblGenomes-Tr:CAL14111,GOA:A1JSW6,InterPro:IPR001106,InterPro:IPR005921,InterPro:IPR008948,InterPro:IPR022313,InterPro:IPR024083,NCBI_GP:CAL14111.1;Name=CAL14111.1;gbkey=CDS;gene=hutH;product=histidine ammonia-lyase;protein_id=CAL14111.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4479461	4480885	.	-	.	ID=id7169;Note=Pfam match to entry PF00221 PAL%2C Phenylalanine and histidine ammonia-lyase%2C score 893.4%2C E-value 4.3e-266;gbkey=misc_feature;gene=hutH;inference=protein motif:PFAM:PF00221
AM286415.1	EMBL	sequence_feature	4480379	4480420	.	-	.	ID=id7170;Note=PS00213 Lipocalin signature.;gbkey=misc_feature;gene=hutH;inference=protein motif:Prosite:PS00213
AM286415.1	EMBL	sequence_feature	4480433	4480480	.	-	.	ID=id7171;Note=PS00488 Phenylalanine and histidine ammonia-lyases signature.;gbkey=misc_feature;gene=hutH;inference=protein motif:Prosite:PS00488
AM286415.1	EMBL	gene	4480894	4482585	.	-	.	ID=gene4050;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=YE4095
AM286415.1	EMBL	CDS	4480894	4482585	.	-	0	ID=cds3942;Parent=gene4050;Dbxref=EnsemblGenomes-Gn:YE4095,EnsemblGenomes-Tr:CAL14112,GOA:A1JSW8,InterPro:IPR023636,InterPro:IPR023637,NCBI_GP:CAL14112.1;Name=CAL14112.1;gbkey=CDS;gene=hutU;product=urocanate hydratase;protein_id=CAL14112.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4480918	4482582	.	-	.	ID=id7172;Note=Pfam match to entry PF01175 Urocanase%2C Urocanase %2Cscore 1391.9%2C E-value 0;gbkey=misc_feature;gene=hutU;inference=protein motif:PFAM:PF01175
AM286415.1	EMBL	sequence_feature	4481350	4481379	.	-	.	ID=id7173;Note=PS01233 Urocanase active site.;gbkey=misc_feature;gene=hutU;inference=protein motif:Prosite:PS01233
AM286415.1	EMBL	sequence_feature	4482010	4482042	.	-	.	ID=id7174;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=hutU;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4482645	4482824	.	-	.	ID=gene4051;Name=YE4096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4096
AM286415.1	EMBL	CDS	4482645	4482824	.	-	0	ID=cds3943;Parent=gene4051;Dbxref=EnsemblGenomes-Gn:YE4096,EnsemblGenomes-Tr:CAL14113,UniProtKB/TrEMBL:A1JSW9,NCBI_GP:CAL14113.1;Name=CAL14113.1;Note=Hypothetical protein with no significant hits in the databases;gbkey=CDS;product=Hypothetical protein;protein_id=CAL14113.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4482657	4482725	.	-	.	ID=id7175;Note=1 probable transmembrane helix predicted for YE4096 by TMHMM2.0 at aa 34-56;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4482954	4483127	.	-	.	ID=gene4052;Name=YE4097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4097
AM286415.1	EMBL	CDS	4482954	4483127	.	-	0	ID=cds3944;Parent=gene4052;Dbxref=EnsemblGenomes-Gn:YE4097,EnsemblGenomes-Tr:CAL14114,UniProtKB/TrEMBL:A1JSX1,NCBI_GP:CAL14114.1;Name=CAL14114.1;Note=Hypothetical protein with no significant homology to proteins in the database;gbkey=CDS;product=Hypothetical protein;protein_id=CAL14114.1;transl_table=11
AM286415.1	EMBL	gene	4483223	4484416	.	-	.	ID=gene4053;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=YE4098
AM286415.1	EMBL	CDS	4483223	4484416	.	-	0	ID=cds3945;Parent=gene4053;Dbxref=EnsemblGenomes-Gn:YE4098,EnsemblGenomes-Tr:CAL14115,GOA:A1JSX2,InterPro:IPR001250,InterPro:IPR011051,InterPro:IPR014710,InterPro:IPR016305,InterPro:IPR018050,UniProtKB/TrEMBL:A1JSX2,NCBI_GP:CAL14115.1;Name=CAL14115.1;Note=Similar to Escherichia coli mannose-6-phosphate isomerase manA or pmi or b1613 SWALL:MANA_ECOLI (SWALL:P00946) (391 aa) fasta scores: E(): 2.7e-54%2C 42.96 id in 391 aa%2C and to Vibrio cholerae mannose-6-phosphate isomerase vc1827 SWALL:Q9KR20 (EMBL:AE004259) (388 aa) fasta scores: E(): 6.1e-66%2C 48.19 38d in 388 aa%2C and to Yersinia pestis mannose-6-phosphate isomerase manA or ypo2263 SWALL:Q8ZEB7 (EMBL:AJ414151) (391 aa) fasta scores: E(): 8.2e-56%2C 44.13 38d in 392 aa;gbkey=CDS;gene=manA;inference=similar to sequence:UniProtKB:P00946;product=mannose-6-phosphate isomerase;protein_id=CAL14115.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4483325	4484392	.	-	.	ID=id7176;Note=Pfam match to entry PF01238 PMI_typeI%2CPhosphomannose isomerase type I%2C score 272.9%2C E-value 2.8e-79;gbkey=misc_feature;gene=manA;inference=protein motif:PFAM:PF01238
AM286415.1	EMBL	sequence_feature	4484000	4484026	.	-	.	ID=id7177;Note=PS00965 Phosphomannose isomerase type I signature 1.;gbkey=misc_feature;gene=manA;inference=protein motif:Prosite:PS00965
AM286415.1	EMBL	gene	4484438	4485838	.	-	.	ID=gene4054;Name=bglA;gbkey=Gene;gene=bglA;gene_biotype=protein_coding;locus_tag=YE4099
AM286415.1	EMBL	CDS	4484438	4485838	.	-	0	ID=cds3946;Parent=gene4054;Dbxref=EnsemblGenomes-Gn:YE4099,EnsemblGenomes-Tr:CAL14116,GOA:A1JSX3,InterPro:IPR001360,InterPro:IPR013781,InterPro:IPR017853,UniProtKB/TrEMBL:A1JSX3,NCBI_GP:CAL14116.1;Name=CAL14116.1;Note=Similar to Clostridium perfringens beta-glucosidase cpe2309 SWALL:Q8XI15 (EMBL:AP003193) (459 aa) fasta scores: E(): 2.6e-103%2C 52.72 38d in 459 aa%2C and to Caldocellum saccharolyticum beta-glucosidase a bglA SWALL:BGLS_CALSA (SWALL:P10482) (455 aa) fasta scores: E(): 3.2e-46%2C 32.03 38d in 462 aa;gbkey=CDS;gene=bglA;inference=similar to sequence:UniProtKB:P10482;product=Probable beta-glucosidase;protein_id=CAL14116.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4484441	4485835	.	-	.	ID=id7178;Note=Pfam match to entry PF00232 Glyco_hydro_1%2C Glycosyl hydrolase family 1%2C score 300.8%2C E-value 1.1e-87;gbkey=misc_feature;gene=bglA;inference=protein motif:PFAM:PF00232
AM286415.1	EMBL	gene	4485909	4488104	.	-	.	ID=gene4055;Name=YE4100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4100
AM286415.1	EMBL	CDS	4485909	4488104	.	-	0	ID=cds3947;Parent=gene4055;Dbxref=EnsemblGenomes-Gn:YE4100,EnsemblGenomes-Tr:CAL14117,GOA:A1JSX4,InterPro:IPR003961,InterPro:IPR008979,InterPro:IPR013781,InterPro:IPR013783,InterPro:IPR017853,UniProtKB/TrEMBL:A1JSX4,NCBI_GP:CAL14117.1;Name=CAL14117.1;Note=Similar to Thermotoga neapolitana beta-mannosidase manB or man5 SWALL:AAK53459 (EMBL:Y17981) (666 aa) fasta scores: E(): 1.5e-06%2C 25.88 38d in 367 aa;gbkey=CDS;inference=similar to sequence:INSDC:Y17981;product=Possible beta-1%2C4 mannanase;protein_id=CAL14117.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4486638	4486661	.	-	.	ID=id7179;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4488112	4489446	.	-	.	ID=gene4056;Name=YE4101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4101
AM286415.1	EMBL	CDS	4488112	4489446	.	-	0	ID=cds3948;Parent=gene4056;Dbxref=EnsemblGenomes-Gn:YE4101,EnsemblGenomes-Tr:CAL14118,GOA:A1JSX6,InterPro:IPR003192,UniProtKB/TrEMBL:A1JSX6,NCBI_GP:CAL14118.1;Name=CAL14118.1;Note=Similar to Salmonella typhimurium sucrose porin precursor scrY SWALL:SCRY_SALTY (SWALL:P22340) (505 aa) fasta scores: E(): 7.4e-24%2C 28.85 38d in 447 aa%2C and to Escherichia coli maltoporin precursor lamB or malB or b4036 SWALL:LAMB_ECOLI (SWALL:P02943) (446 aa) fasta scores: E(): 1.4e-22%2C 29.53 38d in 474 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P22340;product=Putative outer membrane porin;protein_id=CAL14118.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4488115	4489356	.	-	.	ID=id7180;Note=Pfam match to entry PF02264 LamB%2C LamB porin %2Cscore 98.3%2C E-value 9.5e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF02264
AM286415.1	EMBL	sequence_feature	4488154	4488177	.	-	.	ID=id7181;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4489690	4490964	.	-	.	ID=gene4057;Name=YE4102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4102
AM286415.1	EMBL	CDS	4489690	4490964	.	-	0	ID=cds3949;Parent=gene4057;Dbxref=EnsemblGenomes-Gn:YE4102,EnsemblGenomes-Tr:CAL14119,GOA:A1JSX8,InterPro:IPR003352,InterPro:IPR004501,InterPro:IPR004796,UniProtKB/TrEMBL:A1JSX8,NCBI_GP:CAL14119.1;Name=CAL14119.1;Note=Similar to Vibrio cholerae pts system%2Ccellobiose-specific IIc component vc1282 SWALL:Q9KSH4 (EMBL:AE004207) (446 aa) fasta scores: E(): 3.3e-63%2C36.97 38d in 430 aa%2C and to Bacillus stearothermophilus pts system%2C cellobiose-specific iic component celB SWALL:PTCC_BACST (SWALL:Q45400) (451 aa) fasta scores: E(): 9.7e-33%2C 31.17 38d in 433 aa%3B Probably involved in the uptake of cellobiose;gbkey=CDS;inference=similar to sequence:UniProtKB:Q45400;product=Putative cellobiose-specific phosphotransferase;protein_id=CAL14119.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4490800	4490859	.	-	.	ID=id7182;Note=10 probable transmembrane helices predicted for YE4102 by TMHMM2.0 at aa 36-55%2C 75-97%2C 110-125%2C 135-157%2C178-200%2C 215-234%2C 239-261%2C 281-303%2C 316-338 and 343-365;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4490674	4490742	.	-	.	ID=id7182;Note=10 probable transmembrane helices predicted for YE4102 by TMHMM2.0 at aa 36-55%2C 75-97%2C 110-125%2C 135-157%2C178-200%2C 215-234%2C 239-261%2C 281-303%2C 316-338 and 343-365;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4490590	4490637	.	-	.	ID=id7182;Note=10 probable transmembrane helices predicted for YE4102 by TMHMM2.0 at aa 36-55%2C 75-97%2C 110-125%2C 135-157%2C178-200%2C 215-234%2C 239-261%2C 281-303%2C 316-338 and 343-365;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4490494	4490562	.	-	.	ID=id7182;Note=10 probable transmembrane helices predicted for YE4102 by TMHMM2.0 at aa 36-55%2C 75-97%2C 110-125%2C 135-157%2C178-200%2C 215-234%2C 239-261%2C 281-303%2C 316-338 and 343-365;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4490365	4490433	.	-	.	ID=id7182;Note=10 probable transmembrane helices predicted for YE4102 by TMHMM2.0 at aa 36-55%2C 75-97%2C 110-125%2C 135-157%2C178-200%2C 215-234%2C 239-261%2C 281-303%2C 316-338 and 343-365;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4490263	4490322	.	-	.	ID=id7182;Note=10 probable transmembrane helices predicted for YE4102 by TMHMM2.0 at aa 36-55%2C 75-97%2C 110-125%2C 135-157%2C178-200%2C 215-234%2C 239-261%2C 281-303%2C 316-338 and 343-365;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4490182	4490250	.	-	.	ID=id7182;Note=10 probable transmembrane helices predicted for YE4102 by TMHMM2.0 at aa 36-55%2C 75-97%2C 110-125%2C 135-157%2C178-200%2C 215-234%2C 239-261%2C 281-303%2C 316-338 and 343-365;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4490056	4490124	.	-	.	ID=id7182;Note=10 probable transmembrane helices predicted for YE4102 by TMHMM2.0 at aa 36-55%2C 75-97%2C 110-125%2C 135-157%2C178-200%2C 215-234%2C 239-261%2C 281-303%2C 316-338 and 343-365;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4489951	4490019	.	-	.	ID=id7182;Note=10 probable transmembrane helices predicted for YE4102 by TMHMM2.0 at aa 36-55%2C 75-97%2C 110-125%2C 135-157%2C178-200%2C 215-234%2C 239-261%2C 281-303%2C 316-338 and 343-365;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4489870	4489938	.	-	.	ID=id7182;Note=10 probable transmembrane helices predicted for YE4102 by TMHMM2.0 at aa 36-55%2C 75-97%2C 110-125%2C 135-157%2C178-200%2C 215-234%2C 239-261%2C 281-303%2C 316-338 and 343-365;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	sequence_feature	4489918	4490829	.	-	.	ID=id7183;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score -91.8%2C E-value 0.0021;gbkey=misc_feature;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	gene	4491149	4491463	.	+	.	ID=gene4058;Name=YE4103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4103
AM286415.1	EMBL	CDS	4491149	4491463	.	+	0	ID=cds3950;Parent=gene4058;Dbxref=EnsemblGenomes-Gn:YE4103,EnsemblGenomes-Tr:CAL14120,GOA:A1JSX9,InterPro:IPR003501,InterPro:IPR013012,UniProtKB/TrEMBL:A1JSX9,NCBI_GP:CAL14120.1;Name=CAL14120.1;Note=Similar to Bacillus stearothermophilus pts system%2Ccellobiose-specific IIb component celA SWALL:PTCB_BACST (SWALL:Q45399) (100 aa) fasta scores: E(): 7.6e-11%2C 44.79 id in 96 aa%2C and to Vibrio cholerae pts system%2Ccellobiose-specific iib component vc1281 SWALL:Q9KSH5 (EMBL:AE004207) (101 aa) fasta scores: E(): 4.9e-15%2C50.49 38d in 101 aa%3B possibly involved in cellobiose transport;gbkey=CDS;inference=similar to sequence:UniProtKB:Q45399;product=pts system%2C cellobiose-specific IIb component;protein_id=CAL14120.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4491152	4491427	.	+	.	ID=id7184;Note=Pfam match to entry PF02302 PTS_IIB%2C PTS system%2CLactose/Cellobiose specific IIB subunit%2C score 112.9%2CE-value 4e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF02302
AM286415.1	EMBL	gene	4491474	4492799	.	+	.	ID=gene4059;Name=YE4104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4104
AM286415.1	EMBL	CDS	4491474	4492799	.	+	0	ID=cds3951;Parent=gene4059;Dbxref=EnsemblGenomes-Gn:YE4104,EnsemblGenomes-Tr:CAL14121,GOA:A1JSY0,InterPro:IPR003352,InterPro:IPR004501,InterPro:IPR004796,UniProtKB/TrEMBL:A1JSY0,NCBI_GP:CAL14121.1;Name=CAL14121.1;Note=Similar to Lactococcus lactis pts system%2Clactose-specific IIbc component lacE SWALL:PTLB_LACLA (SWALL:P23531) (568 aa) fasta scores: E(): 1.9e-44%2C 34.65 id in 453 aa%2C and to Vibrio cholerae pts system%2Ccellobiose-specific iic component vc1282 SWALL:Q9KSH4 (EMBL:AE004207) (446 aa) fasta scores: E(): 5.9e-100%2C53.55 38d in 422 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P23531;product=Putative phosphotransferase protein;protein_id=CAL14121.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4491579	4491647	.	+	.	ID=id7185;Note=8 probable transmembrane helices predicted for YE4104 by TMHMM2.0 at aa 36-58%2C 78-100%2C 112-129%2C 139-161%2C240-262%2C 289-311%2C 332-354 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/8
AM286415.1	EMBL	sequence_feature	4491705	4491773	.	+	.	ID=id7185;Note=8 probable transmembrane helices predicted for YE4104 by TMHMM2.0 at aa 36-58%2C 78-100%2C 112-129%2C 139-161%2C240-262%2C 289-311%2C 332-354 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/8
AM286415.1	EMBL	sequence_feature	4491807	4491860	.	+	.	ID=id7185;Note=8 probable transmembrane helices predicted for YE4104 by TMHMM2.0 at aa 36-58%2C 78-100%2C 112-129%2C 139-161%2C240-262%2C 289-311%2C 332-354 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/8
AM286415.1	EMBL	sequence_feature	4491888	4491956	.	+	.	ID=id7185;Note=8 probable transmembrane helices predicted for YE4104 by TMHMM2.0 at aa 36-58%2C 78-100%2C 112-129%2C 139-161%2C240-262%2C 289-311%2C 332-354 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/8
AM286415.1	EMBL	sequence_feature	4492191	4492259	.	+	.	ID=id7185;Note=8 probable transmembrane helices predicted for YE4104 by TMHMM2.0 at aa 36-58%2C 78-100%2C 112-129%2C 139-161%2C240-262%2C 289-311%2C 332-354 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/8
AM286415.1	EMBL	sequence_feature	4492338	4492406	.	+	.	ID=id7185;Note=8 probable transmembrane helices predicted for YE4104 by TMHMM2.0 at aa 36-58%2C 78-100%2C 112-129%2C 139-161%2C240-262%2C 289-311%2C 332-354 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/8
AM286415.1	EMBL	sequence_feature	4492467	4492535	.	+	.	ID=id7185;Note=8 probable transmembrane helices predicted for YE4104 by TMHMM2.0 at aa 36-58%2C 78-100%2C 112-129%2C 139-161%2C240-262%2C 289-311%2C 332-354 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/8
AM286415.1	EMBL	sequence_feature	4492647	4492715	.	+	.	ID=id7185;Note=8 probable transmembrane helices predicted for YE4104 by TMHMM2.0 at aa 36-58%2C 78-100%2C 112-129%2C 139-161%2C240-262%2C 289-311%2C 332-354 and 392-414;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/8
AM286415.1	EMBL	sequence_feature	4491606	4492529	.	+	.	ID=id7186;Note=Pfam match to entry PF02378 PTS_EIIC%2CPhosphotransferase system%2C EIIC%2C score -116.1%2C E-value 0.021;gbkey=misc_feature;inference=protein motif:PFAM:PF02378
AM286415.1	EMBL	gene	4492830	4493132	.	+	.	ID=gene4060;Name=YE4105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4105
AM286415.1	EMBL	CDS	4492830	4493132	.	+	0	ID=cds3952;Parent=gene4060;Dbxref=EnsemblGenomes-Gn:YE4105,EnsemblGenomes-Tr:CAL14122,GOA:A1JSY1,InterPro:IPR003188,UniProtKB/TrEMBL:A1JSY1,NCBI_GP:CAL14122.1;Name=CAL14122.1;Note=Similar to Yersinia pestis pts system cellobiose-specific IIa component celC or ypo2680 SWALL:Q8ZDA8 (EMBL:AJ414153) (115 aa) fasta scores: E(): 1.1e-20%2C 64.58 38d in 96 aa%2C and to Escherichia coli%2C and Escherichia coli O157:H7 pts system cellobiose-specific IIa component celC or b1736 or z2766 or ecs2442 SWALL:PTCA_ECOLI (SWALL:P17335) (116 aa) fasta scores: E(): 5.2e-20%2C 63.54 38d in 96 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P17335;product=Putative phosphotransferase protein;protein_id=CAL14122.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4492839	4493126	.	+	.	ID=id7187;Note=Pfam match to entry PF02255 PTS_IIA%2C PTS system%2CLactose/Cellobiose specific IIA subunit%2C score 141.0%2CE-value 1.4e-39;gbkey=misc_feature;inference=protein motif:PFAM:PF02255
AM286415.1	EMBL	sequence_feature	4493007	4493030	.	+	.	ID=id7188;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4493211	4494113	.	+	.	ID=gene4061;Name=YE4106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4106
AM286415.1	EMBL	CDS	4493211	4494113	.	+	0	ID=cds3953;Parent=gene4061;Dbxref=EnsemblGenomes-Gn:YE4106,EnsemblGenomes-Tr:CAL14123,InterPro:IPR000600,UniProtKB/TrEMBL:A1JSY3,NCBI_GP:CAL14123.1;Name=CAL14123.1;Note=Similar to Vibrio cholerae rok family protein vc0270 SWALL:Q9KV86 (EMBL:AE004115) (326 aa) fasta scores: E(): 5.8e-60%2C 52.04 38d in 294 aa%3B possibly not a transcriptional repressor since there is no HTH DNA-binding motif;gbkey=CDS;inference=similar to sequence:INSDC:AE004115;product=Hypothetical ROK family protein;protein_id=CAL14123.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4493223	4493786	.	+	.	ID=id7189;Note=Pfam match to entry PF00480 ROK%2C ROK family%2C score 179.2%2C E-value 4.2e-51;gbkey=misc_feature;inference=protein motif:PFAM:PF00480
AM286415.1	EMBL	sequence_feature	4493601	4493684	.	+	.	ID=id7190;Note=PS01125 ROK family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01125
AM286415.1	EMBL	gene	4494216	4495178	.	+	.	ID=gene4062;Name=YE4107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4107
AM286415.1	EMBL	CDS	4494216	4495178	.	+	0	ID=cds3954;Parent=gene4062;Dbxref=EnsemblGenomes-Gn:YE4107,EnsemblGenomes-Tr:CAL14124,GOA:A1JSY4,InterPro:IPR000843,InterPro:IPR010982,InterPro:IPR028082,UniProtKB/TrEMBL:A1JSY4,NCBI_GP:CAL14124.1;Name=CAL14124.1;Note=Similar to Klebsiella pneumoniae ribose operon repressor rbsR SWALL:Q937H4 (EMBL:AJ292311) (94 aa) fasta scores: E(): 2.4e-20%2C 76.59 38d in 94 aa%3B contains PFAM motif from transcriptional repressors or periplasmic binding proteins%3B shares low similarity with transcriptional repressors and has no predicted signal sequence;gbkey=CDS;inference=similar to sequence:INSDC:AJ292311;product=putative transcriptional regulator;protein_id=CAL14124.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4494390	4495157	.	+	.	ID=id7191;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 3.7%2C E-value 9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	sequence_feature	4494885	4494911	.	+	.	ID=id7192;Note=PS00205 Transferrins signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS00205
AM286415.1	EMBL	gene	4495212	4495673	.	-	.	ID=gene4063;Name=YE4108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4108
AM286415.1	EMBL	CDS	4495212	4495673	.	-	0	ID=cds3955;Parent=gene4063;Dbxref=EnsemblGenomes-Gn:YE4108,EnsemblGenomes-Tr:CAL14125,GOA:A1JSY5,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JSY5,NCBI_GP:CAL14125.1;Name=CAL14125.1;Note=No significant hits in the databases;gbkey=CDS;product=hypothetical protein;protein_id=CAL14125.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4495290	4495517	.	-	.	ID=id7193;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 31.9%2C E-value 9.5e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	4496817	4497812	.	-	.	ID=gene4064;Name=YE4109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4109
AM286415.1	EMBL	CDS	4496817	4497812	.	-	0	ID=cds3956;Parent=gene4064;Dbxref=EnsemblGenomes-Gn:YE4109,EnsemblGenomes-Tr:CAL14126,InterPro:IPR014942,UniProtKB/TrEMBL:A1JSY6,NCBI_GP:CAL14126.1;Name=CAL14126.1;Note=No significant hits in the databases;gbkey=CDS;product=hypothetical protein;protein_id=CAL14126.1;transl_table=11
AM286415.1	EMBL	gene	4497889	4498296	.	-	.	ID=gene4065;Name=YE4110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4110
AM286415.1	EMBL	CDS	4497889	4498296	.	-	0	ID=cds3957;Parent=gene4065;Dbxref=EnsemblGenomes-Gn:YE4110,EnsemblGenomes-Tr:CAL14127,InterPro:IPR025159,UniProtKB/TrEMBL:A1JSY7,NCBI_GP:CAL14127.1;Name=CAL14127.1;gbkey=CDS;product=Hypothetical protein;protein_id=CAL14127.1;transl_table=11
AM286415.1	EMBL	gene	4498512	4498793	.	-	.	ID=gene4066;Name=YE4111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4111
AM286415.1	EMBL	CDS	4498512	4498793	.	-	0	ID=cds3958;Parent=gene4066;Dbxref=EnsemblGenomes-Gn:YE4111,EnsemblGenomes-Tr:CAL14128,UniProtKB/TrEMBL:A1JSY9,NCBI_GP:CAL14128.1;Name=CAL14128.1;Note=Similar to Yersinia pestis KIM hypothetical y3270 SWALL:AAM86820 (EMBL:AE013928) (93 aa) fasta scores: E(): 3.3e-33%2C 81.72 38d in 93 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE013928;product=hypothetical protein;protein_id=CAL14128.1;transl_table=11
AM286415.1	EMBL	gene	4499404	4500513	.	+	.	ID=gene4067;Name=YE4112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4112
AM286415.1	EMBL	CDS	4499404	4500513	.	+	0	ID=cds3959;Parent=gene4067;Dbxref=EnsemblGenomes-Gn:YE4112,EnsemblGenomes-Tr:CAL14129,GOA:A1JSZ0,InterPro:IPR003812,InterPro:IPR025758,InterPro:IPR026287,UniProtKB/TrEMBL:A1JSZ0,NCBI_GP:CAL14129.1;Name=CAL14129.1;Note=Similar to Neisseria meningitidis hypothetical protein Nma1635 SWALL:Q9JTU0 (EMBL:AL162756) (375 aa) fasta scores: E(): 2e-82%2C 57.1 38d in 366 aa%2C and to Campylobacter jejuni mloA SWALL:AAM00840 (EMBL:AF486549) (356 aa) fasta scores: E(): 1.6e-44%2C 41.15 38d in 345 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL162756;product=conserved ypothetical protein;protein_id=CAL14129.1;transl_table=11
AM286415.1	EMBL	pseudogene	4500962	4501330	.	-	.	ID=gene4068;Name=YE4113;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE4113;pseudo=true
AM286415.1	EMBL	CDS	4500962	4501330	.	-	0	ID=cds3960;Parent=gene4068;Note=No significant database matches to the full length CDS. N-terminus similar to Yersinia pestis putative regulatory protein ypo0878 SWALL:Q8ZHL3 (EMBL:AJ414145) (66 aa) fasta scores: E(): 3.1e-20%2C 96.77 38d in 62 aa%3B C-terminus similar to Yersinia pestis putative primase ypo0880 SWALL:Q8ZHL1 (EMBL:AJ414145) (763 aa) fasta scores: E(): 1.1e-44%2C 92.12 38d in 127 aa%3B CDS appears to be a fusion protein%2C possibly resulting from a deletion or insertion event;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=putative phage primase (fragment);pseudo=true;transl_table=11
AM286415.1	EMBL	pseudogene	4501692	4502372	.	-	.	ID=gene4069;Name=YE4114;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE4114;pseudo=true
AM286415.1	EMBL	CDS	4501692	4502372	.	-	0	ID=cds3961;Parent=gene4069;Dbxref=PSEUDO:CAL14131.1;Note=No significant database matches to the full length CDS. N-terminus similar to Yersinia pestis hypothetical protein Ypo0876 ypo0876 SWALL:Q8ZHL5 (EMBL:AJ414145) (78 aa) fasta scores: E(): 7.2e-25%2C 93.59 38d in 78 aa%3B C-terminus similar to Yersinia pestis hypothetical protein Ypo0877 ypo0877 SWALL:Q8ZHL4 (EMBL:AJ414145) (110 aa) fasta scores: E(): 6.8e-35%2C 87.27 38d in 110 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	pseudogene	4502385	4502751	.	-	.	ID=gene4070;Name=YE4115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YE4115;pseudo=true
AM286415.1	EMBL	CDS	4502545	4502751	.	-	0	ID=cds3962;Parent=gene4070;Dbxref=PSEUDO:CAL14132.1;Note=Similar to Yersinia pestis hypothetical protein Ypo0875 ypo0875 SWALL:Q8ZHL6 (EMBL:AJ414145) (121 aa) fasta scores: E(): 2.1e-39%2C 82.64 38d in 121 aa%2C and to Yersinia pestis KIM hypothetical y3257 SWALL:AAM86807 (EMBL:AE013927) (101 aa) fasta scores: E(): 7.6e-31%2C78.21 38d in 101 aa%3B Region that is similar to Yersinia pestis Ypo0875 contains a probable frameshift after codon 70;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	CDS	4502385	4502543	.	-	0	ID=cds3962;Parent=gene4070;Dbxref=PSEUDO:CAL14132.1;Note=Similar to Yersinia pestis hypothetical protein Ypo0875 ypo0875 SWALL:Q8ZHL6 (EMBL:AJ414145) (121 aa) fasta scores: E(): 2.1e-39%2C 82.64 38d in 121 aa%2C and to Yersinia pestis KIM hypothetical y3257 SWALL:AAM86807 (EMBL:AE013927) (101 aa) fasta scores: E(): 7.6e-31%2C78.21 38d in 101 aa%3B Region that is similar to Yersinia pestis Ypo0875 contains a probable frameshift after codon 70;gbkey=CDS;inference=similar to sequence:INSDC:AJ414145;product=conserved hypothetical protein (pseudogene);pseudo=true;transl_table=11
AM286415.1	EMBL	gene	4502800	4504014	.	-	.	ID=gene4071;Name=YE4117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4117
AM286415.1	EMBL	CDS	4502800	4504014	.	-	0	ID=cds3963;Parent=gene4071;Dbxref=EnsemblGenomes-Gn:YE4117,EnsemblGenomes-Tr:CAL14133,GOA:A1JSZ3,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR023109,InterPro:IPR025166,UniProtKB/TrEMBL:A1JSZ3,NCBI_GP:CAL14133.1;Name=CAL14133.1;gbkey=CDS;product=putative phage integrase;protein_id=CAL14133.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4502887	4503396	.	-	.	ID=id7194;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 103.2%2C E-value 3.2e-28;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286415.1	EMBL	gene	4504182	4504272	.	-	.	ID=gene4072;Name=tRNA-SelC(p) (TCA);gbkey=Gene;gene=tRNA-SelC(p) (TCA);gene_biotype=tRNA;gene_synonym=selC
AM286415.1	EMBL	tRNA	4504182	4504272	.	-	.	ID=rna145;Parent=gene4072;Note=codon recognized: UGA%3B anticodon: UCA selenocysteine tRNA%3B go_component: cytoplasm [goid 0005737]%3B go_process: tRNA metabolism [goid 0006399];gbkey=tRNA;gene=tRNA-SelC(p) (TCA);product=tRNA-Sec
AM286415.1	EMBL	exon	4504182	4504272	.	-	.	ID=id7195;Parent=rna145;Note=codon recognized: UGA%3B anticodon: UCA selenocysteine tRNA%3B go_component: cytoplasm [goid 0005737]%3B go_process: tRNA metabolism [goid 0006399];gbkey=tRNA;gene=tRNA-SelC(p) (TCA);product=tRNA-Sec
AM286415.1	EMBL	gene	4504402	4505595	.	-	.	ID=gene4073;Name=YE4118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4118
AM286415.1	EMBL	CDS	4504402	4505595	.	-	0	ID=cds3964;Parent=gene4073;Dbxref=EnsemblGenomes-Gn:YE4118,EnsemblGenomes-Tr:CAL14134,GOA:A1JSZ4,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR020449,InterPro:IPR028082,UniProtKB/TrEMBL:A1JSZ4,NCBI_GP:CAL14134.1;Name=CAL14134.1;gbkey=CDS;product=putative AraC-family transcriptional regulator;protein_id=CAL14134.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4504426	4504557	.	-	.	ID=id7196;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 46.9%2C E-value 3e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	4504441	4504569	.	-	.	ID=id7197;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	sequence_feature	4504576	4504713	.	-	.	ID=id7198;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 34.0%2C E-value 2.3e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	4505679	4506863	.	-	.	ID=gene4074;Name=YE4119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4119
AM286415.1	EMBL	CDS	4505679	4506863	.	-	0	ID=cds3965;Parent=gene4074;Dbxref=EnsemblGenomes-Gn:YE4119,EnsemblGenomes-Tr:CAL14135,GOA:A1JT05,InterPro:IPR001851,UniProtKB/TrEMBL:A1JT05,NCBI_GP:CAL14135.1;Name=CAL14135.1;gbkey=CDS;product=sugar transport system permease protein;protein_id=CAL14135.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4505682	4506704	.	-	.	ID=id7199;Note=Pfam match to entry PF02653 BPD_transp_2%2CBranched-chain amino acid transport system / permease component%2C score -11.9%2C E-value 3.8e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF02653
AM286415.1	EMBL	sequence_feature	4506723	4506791	.	-	.	ID=id7200;Note=10 probable transmembrane helices predicted for YE4119 by TMHMM2.0 at aa 25-47%2C 62-81%2C 86-108%2C 112-134%2C141-163%2C 178-197%2C 244-266%2C 292-314%2C 327-349 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4506621	4506680	.	-	.	ID=id7200;Note=10 probable transmembrane helices predicted for YE4119 by TMHMM2.0 at aa 25-47%2C 62-81%2C 86-108%2C 112-134%2C141-163%2C 178-197%2C 244-266%2C 292-314%2C 327-349 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4506540	4506608	.	-	.	ID=id7200;Note=10 probable transmembrane helices predicted for YE4119 by TMHMM2.0 at aa 25-47%2C 62-81%2C 86-108%2C 112-134%2C141-163%2C 178-197%2C 244-266%2C 292-314%2C 327-349 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4506462	4506530	.	-	.	ID=id7200;Note=10 probable transmembrane helices predicted for YE4119 by TMHMM2.0 at aa 25-47%2C 62-81%2C 86-108%2C 112-134%2C141-163%2C 178-197%2C 244-266%2C 292-314%2C 327-349 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4506375	4506443	.	-	.	ID=id7200;Note=10 probable transmembrane helices predicted for YE4119 by TMHMM2.0 at aa 25-47%2C 62-81%2C 86-108%2C 112-134%2C141-163%2C 178-197%2C 244-266%2C 292-314%2C 327-349 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4506273	4506332	.	-	.	ID=id7200;Note=10 probable transmembrane helices predicted for YE4119 by TMHMM2.0 at aa 25-47%2C 62-81%2C 86-108%2C 112-134%2C141-163%2C 178-197%2C 244-266%2C 292-314%2C 327-349 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4506066	4506134	.	-	.	ID=id7200;Note=10 probable transmembrane helices predicted for YE4119 by TMHMM2.0 at aa 25-47%2C 62-81%2C 86-108%2C 112-134%2C141-163%2C 178-197%2C 244-266%2C 292-314%2C 327-349 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4505922	4505990	.	-	.	ID=id7200;Note=10 probable transmembrane helices predicted for YE4119 by TMHMM2.0 at aa 25-47%2C 62-81%2C 86-108%2C 112-134%2C141-163%2C 178-197%2C 244-266%2C 292-314%2C 327-349 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4505817	4505885	.	-	.	ID=id7200;Note=10 probable transmembrane helices predicted for YE4119 by TMHMM2.0 at aa 25-47%2C 62-81%2C 86-108%2C 112-134%2C141-163%2C 178-197%2C 244-266%2C 292-314%2C 327-349 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4505706	4505759	.	-	.	ID=id7200;Note=10 probable transmembrane helices predicted for YE4119 by TMHMM2.0 at aa 25-47%2C 62-81%2C 86-108%2C 112-134%2C141-163%2C 178-197%2C 244-266%2C 292-314%2C 327-349 and 369-386;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	4506850	4508382	.	-	.	ID=gene4075;Name=YE4120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4120
AM286415.1	EMBL	CDS	4506850	4508382	.	-	0	ID=cds3966;Parent=gene4075;Dbxref=EnsemblGenomes-Gn:YE4120,EnsemblGenomes-Tr:CAL14136,GOA:A1JT06,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR013455,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JT06,NCBI_GP:CAL14136.1;Name=CAL14136.1;gbkey=CDS;product=sugar transport ATP-binding protein;protein_id=CAL14136.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4506940	4507524	.	-	.	ID=id7201;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 92.3%2C E-value 6.5e-25;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4507123	4507167	.	-	.	ID=id7202;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	4507729	4508295	.	-	.	ID=id7203;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 162.7%2C E-value 4.1e-46;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4508251	4508274	.	-	.	ID=id7204;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4508475	4509470	.	-	.	ID=gene4076;Name=YE4121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4121
AM286415.1	EMBL	CDS	4508475	4509470	.	-	0	ID=cds3967;Parent=gene4076;Dbxref=EnsemblGenomes-Gn:YE4121,EnsemblGenomes-Tr:CAL14137,GOA:A1JT08,InterPro:IPR013456,InterPro:IPR025997,InterPro:IPR028082,UniProtKB/TrEMBL:A1JT08,NCBI_GP:CAL14137.1;Name=CAL14137.1;gbkey=CDS;product=sugar-binding periplasmic protein;protein_id=CAL14137.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4508547	4509398	.	-	.	ID=id7205;Note=Pfam match to entry PF00532 Peripla_BP_like%2CPeriplasmic binding proteins and sugar binding domain of the LacI family%2C score 14.5%2C E-value 1.9e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00532
AM286415.1	EMBL	gene	4509849	4511168	.	+	.	ID=gene4077;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=YE4122
AM286415.1	EMBL	CDS	4509849	4511168	.	+	0	ID=cds3968;Parent=gene4077;Dbxref=EnsemblGenomes-Gn:YE4122,EnsemblGenomes-Tr:CAL14138,GOA:A1JT10,InterPro:IPR001998,InterPro:IPR013022,InterPro:IPR013452,NCBI_GP:CAL14138.1;Name=CAL14138.1;gbkey=CDS;gene=xylA;product=xylose isomerase;protein_id=CAL14138.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4509933	4511159	.	+	.	ID=id7206;Note=Pfam match to entry PF00259 Xylose_isom%2C Xylose isomerase%2C score 880.2%2C E-value 4.3e-262;gbkey=misc_feature;gene=xylA;inference=protein motif:PFAM:PF00259
AM286415.1	EMBL	sequence_feature	4510146	4510175	.	+	.	ID=id7207;Note=PS00173 Xylose isomerase signature 2.;gbkey=misc_feature;gene=xylA;inference=protein motif:Prosite:PS00173
AM286415.1	EMBL	sequence_feature	4510539	4510562	.	+	.	ID=id7208;Note=PS00172 Xylose isomerase signature 1.;gbkey=misc_feature;gene=xylA;inference=protein motif:Prosite:PS00172
AM286415.1	EMBL	gene	4511318	4512880	.	+	.	ID=gene4078;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=YE4123
AM286415.1	EMBL	CDS	4511318	4512880	.	+	0	ID=cds3969;Parent=gene4078;Dbxref=EnsemblGenomes-Gn:YE4123,EnsemblGenomes-Tr:CAL14139,GOA:A1JT12,InterPro:IPR006000,InterPro:IPR018483,InterPro:IPR018484,InterPro:IPR018485,UniProtKB/TrEMBL:A1JT12,NCBI_GP:CAL14139.1;Name=CAL14139.1;gbkey=CDS;gene=xylB;product=xylulose kinase;protein_id=CAL14139.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4511318	4512037	.	+	.	ID=id7209;Note=Pfam match to entry PF00370 FGGY%2C FGGY family of carbohydrate kinases%2C N-terminal domain%2C score 394.6%2CE-value 6.3e-116;gbkey=misc_feature;gene=xylB;inference=protein motif:PFAM:PF00370
AM286415.1	EMBL	sequence_feature	4511693	4511731	.	+	.	ID=id7210;Note=PS00933 FGGY family of carbohydrate kinases signature 1.;gbkey=misc_feature;gene=xylB;inference=protein motif:Prosite:PS00933
AM286415.1	EMBL	sequence_feature	4512044	4512715	.	+	.	ID=id7211;Note=Pfam match to entry PF02782 FGGY_C%2C FGGY family of carbohydrate kinases%2C C-terminal domain%2C score 308.0%2CE-value 7.5e-90;gbkey=misc_feature;gene=xylB;inference=protein motif:PFAM:PF02782
AM286415.1	EMBL	sequence_feature	4512176	4512208	.	+	.	ID=id7212;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=xylB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4512828	4513595	.	-	.	ID=gene4079;Name=YE4123A;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4123A
AM286415.1	EMBL	CDS	4512828	4513595	.	-	0	ID=cds3970;Parent=gene4079;Dbxref=EnsemblGenomes-Gn:YE4123A,EnsemblGenomes-Tr:CAL14140,GOA:A1JT13,InterPro:IPR001829,InterPro:IPR008962,InterPro:IPR016147,InterPro:IPR016148,InterPro:IPR018046,UniProtKB/TrEMBL:A1JT13,NCBI_GP:CAL14140.1;Name=CAL14140.1;Note=Similar to Yersinia pestis putative fimbrial chaperone ypo4041 SWALL:Q8Z9Y8 (EMBL:AJ414160) (255 aa) fasta scores: E(): 3.7e-63%2C 62.99 38d in 254 aa%2C and to Escherichia coli chaperone protein PapD precursor papD SWALL:PAPD_ECOLI (SWALL:P15319) (239 aa) fasta scores: E(): 7.5e-35%2C 42.79 38d in 236 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P15319;product=Putative fimbrial chaperone;protein_id=CAL14140.1;transl_table=11
AM286415.1	EMBL	gene	4513765	4514859	.	+	.	ID=gene4080;Name=YE4124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4124
AM286415.1	EMBL	CDS	4513765	4514859	.	+	0	ID=cds3971;Parent=gene4080;Dbxref=EnsemblGenomes-Gn:YE4124,EnsemblGenomes-Tr:CAL14141,GOA:A1JT14,InterPro:IPR000868,UniProtKB/TrEMBL:A1JT14,NCBI_GP:CAL14141.1;Name=CAL14141.1;Note=Similar to Agrobacterium tumefaciens hydrolase atu0265 or agr_c_456 SWALL:Q8UIM8 (EMBL:AE008998) (239 aa) fasta scores: E(): 4.5e-30%2C 49.16 38d in 179 aa%3B possible isochorismatase hydrolase;gbkey=CDS;inference=similar to sequence:INSDC:AE008998;product=Putative member of isochorismatase hydrolase family;protein_id=CAL14141.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4513825	4514322	.	+	.	ID=id7213;Note=Pfam match to entry PF00857 Isochorismatase%2CIsochorismatase family%2C score 52.1%2C E-value 8.2e-13;gbkey=misc_feature;inference=protein motif:PFAM:PF00857
AM286415.1	EMBL	sequence_feature	4513918	4513950	.	+	.	ID=id7214;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4514862	4515788	.	+	.	ID=gene4081;Name=YE4125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4125
AM286415.1	EMBL	CDS	4514862	4515788	.	+	0	ID=cds3972;Parent=gene4081;Dbxref=EnsemblGenomes-Gn:YE4125,EnsemblGenomes-Tr:CAL14142,GOA:A1JT16,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR025628,InterPro:IPR029062,UniProtKB/TrEMBL:A1JT16,NCBI_GP:CAL14142.1;Name=CAL14142.1;Note=Similar to Agrobacterium tumefaciens transcriptional regulator%2C araC family atu0264 or agr_c_453 SWALL:Q8UIM9 (EMBL:AE008998) (327 aa) fasta scores: E(): 1.7e-44%2C 44.62 38d in 307 aa%3B Member of the AraC family;gbkey=CDS;inference=similar to sequence:INSDC:AE008998;product=Putative transcriptional regulator;protein_id=CAL14142.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4514868	4515392	.	+	.	ID=id7215;Note=Pfam match to entry PF01965 DJ-1_PfpI%2C DJ-1/PfpI family%2C score 14.3%2C E-value 7.5e-05;gbkey=misc_feature;inference=protein motif:PFAM:PF01965
AM286415.1	EMBL	sequence_feature	4515516	4515653	.	+	.	ID=id7216;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 34.4%2C E-value 1.7e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	sequence_feature	4515666	4515758	.	+	.	ID=id7217;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 4.2%2C E-value 1;gbkey=misc_feature;inference=protein motif:PFAM:PF00165
AM286415.1	EMBL	gene	4515781	4516773	.	-	.	ID=gene4082;Name=YE4126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4126
AM286415.1	EMBL	CDS	4515781	4516773	.	-	0	ID=cds3973;Parent=gene4082;Dbxref=EnsemblGenomes-Gn:YE4126,EnsemblGenomes-Tr:CAL14143,GOA:A1JT18,InterPro:IPR002656,UniProtKB/TrEMBL:A1JT18,NCBI_GP:CAL14143.1;Name=CAL14143.1;gbkey=CDS;product=putative membrane protein;protein_id=CAL14143.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4516669	4516737	.	-	.	ID=id7218;Note=10 probable transmembrane helices predicted for YE4126 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-100%2C 115-134%2C139-157%2C 167-189%2C 202-221%2C 236-255%2C 262-284 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/10
AM286415.1	EMBL	sequence_feature	4516573	4516641	.	-	.	ID=id7218;Note=10 probable transmembrane helices predicted for YE4126 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-100%2C 115-134%2C139-157%2C 167-189%2C 202-221%2C 236-255%2C 262-284 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/10
AM286415.1	EMBL	sequence_feature	4516474	4516539	.	-	.	ID=id7218;Note=10 probable transmembrane helices predicted for YE4126 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-100%2C 115-134%2C139-157%2C 167-189%2C 202-221%2C 236-255%2C 262-284 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/10
AM286415.1	EMBL	sequence_feature	4516372	4516431	.	-	.	ID=id7218;Note=10 probable transmembrane helices predicted for YE4126 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-100%2C 115-134%2C139-157%2C 167-189%2C 202-221%2C 236-255%2C 262-284 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/10
AM286415.1	EMBL	sequence_feature	4516303	4516359	.	-	.	ID=id7218;Note=10 probable transmembrane helices predicted for YE4126 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-100%2C 115-134%2C139-157%2C 167-189%2C 202-221%2C 236-255%2C 262-284 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/10
AM286415.1	EMBL	sequence_feature	4516207	4516275	.	-	.	ID=id7218;Note=10 probable transmembrane helices predicted for YE4126 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-100%2C 115-134%2C139-157%2C 167-189%2C 202-221%2C 236-255%2C 262-284 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/10
AM286415.1	EMBL	sequence_feature	4516111	4516170	.	-	.	ID=id7218;Note=10 probable transmembrane helices predicted for YE4126 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-100%2C 115-134%2C139-157%2C 167-189%2C 202-221%2C 236-255%2C 262-284 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/10
AM286415.1	EMBL	sequence_feature	4516009	4516068	.	-	.	ID=id7218;Note=10 probable transmembrane helices predicted for YE4126 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-100%2C 115-134%2C139-157%2C 167-189%2C 202-221%2C 236-255%2C 262-284 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/10
AM286415.1	EMBL	sequence_feature	4515922	4515990	.	-	.	ID=id7218;Note=10 probable transmembrane helices predicted for YE4126 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-100%2C 115-134%2C139-157%2C 167-189%2C 202-221%2C 236-255%2C 262-284 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/10
AM286415.1	EMBL	sequence_feature	4515811	4515879	.	-	.	ID=id7218;Note=10 probable transmembrane helices predicted for YE4126 by TMHMM2.0 at aa 13-35%2C 45-67%2C 79-100%2C 115-134%2C139-157%2C 167-189%2C 202-221%2C 236-255%2C 262-284 and 299-321;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/10
AM286415.1	EMBL	gene	4517024	4518253	.	+	.	ID=gene4083;Name=mdfA;gbkey=Gene;gene=mdfA;gene_biotype=protein_coding;gene_synonym=cmr;locus_tag=YE4127
AM286415.1	EMBL	CDS	4517024	4518253	.	+	0	ID=cds3974;Parent=gene4083;Dbxref=EnsemblGenomes-Gn:YE4127,EnsemblGenomes-Tr:CAL14144,GOA:A1JT19,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JT19,NCBI_GP:CAL14144.1;Name=CAL14144.1;gbkey=CDS;gene=mdfA;product=multidrug translocase;protein_id=CAL14144.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4517057	4517116	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=1/12
AM286415.1	EMBL	sequence_feature	4517174	4517242	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=2/12
AM286415.1	EMBL	sequence_feature	4517279	4517332	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=3/12
AM286415.1	EMBL	sequence_feature	4517345	4517413	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=4/12
AM286415.1	EMBL	sequence_feature	4517450	4517518	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=5/12
AM286415.1	EMBL	sequence_feature	4517531	4517590	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=6/12
AM286415.1	EMBL	sequence_feature	4517684	4517752	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=7/12
AM286415.1	EMBL	sequence_feature	4517795	4517863	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=8/12
AM286415.1	EMBL	sequence_feature	4517882	4517950	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=9/12
AM286415.1	EMBL	sequence_feature	4517960	4518028	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=10/12
AM286415.1	EMBL	sequence_feature	4518065	4518124	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=11/12
AM286415.1	EMBL	sequence_feature	4518152	4518220	.	+	.	ID=id7219;Note=12 probable transmembrane helices predicted for YE4127 by TMHMM2.0 at aa 12-31%2C 51-73%2C 86-103%2C 108-130%2C143-165%2C 170-189%2C 221-243%2C 258-280%2C 287-309%2C 313-335%2C348-367 and 377-399;gbkey=misc_feature;gene=mdfA;inference=protein motif:TMHMM:2.0;part=12/12
AM286415.1	EMBL	sequence_feature	4517063	4518241	.	+	.	ID=id7220;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -109.7%2C E-value 0.00055;gbkey=misc_feature;gene=mdfA;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	gene	4518288	4519541	.	-	.	ID=gene4084;Name=YE4128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4128
AM286415.1	EMBL	CDS	4518288	4519541	.	-	0	ID=cds3975;Parent=gene4084;Dbxref=EnsemblGenomes-Gn:YE4128,EnsemblGenomes-Tr:CAL14145,GOA:A1JT21,InterPro:IPR002048,InterPro:IPR012893,InterPro:IPR012894,InterPro:IPR017508,UniProtKB/TrEMBL:A1JT21,NCBI_GP:CAL14145.1;Name=CAL14145.1;Note=Similar to Rhizobium sp. hypothetical 45.3 kDa protein Y4dM SWALL:Y4DM_RHISN (SWALL:P55412) (409 aa) fasta scores: E(): 2.5e-38%2C 35.34 38d in 382 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P55412;product=conserved hypothetical protein;protein_id=CAL14145.1;transl_table=11
AM286415.1	EMBL	gene	4519545	4519856	.	-	.	ID=gene4085;Name=YE4129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4129
AM286415.1	EMBL	CDS	4519545	4519856	.	-	0	ID=cds3976;Parent=gene4085;Dbxref=EnsemblGenomes-Gn:YE4129,EnsemblGenomes-Tr:CAL14146,GOA:A1JT22,InterPro:IPR001387,InterPro:IPR010982,UniProtKB/TrEMBL:A1JT22,NCBI_GP:CAL14146.1;Name=CAL14146.1;Note=No significant hits in the databases;gbkey=CDS;product=Hypothetical protein;protein_id=CAL14146.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4519665	4519826	.	-	.	ID=id7221;Note=Pfam match to entry PF01381 HTH_3%2C Helix-turn-helix%2C score 33.6%2C E-value 2.9e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF01381
AM286415.1	EMBL	gene	4520019	4521911	.	-	.	ID=gene4086;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=YE4130
AM286415.1	EMBL	CDS	4520019	4521911	.	-	0	ID=cds3977;Parent=gene4086;Dbxref=EnsemblGenomes-Gn:YE4130,EnsemblGenomes-Tr:CAL14147,GOA:A1JT23,InterPro:IPR000795,InterPro:IPR004161,InterPro:IPR004535,InterPro:IPR009000,InterPro:IPR009001,InterPro:IPR011991,InterPro:IPR015190,InterPro:IPR015191,InterPro:IPR027417,UniProtKB/TrEMBL:A1JT23,NCBI_GP:CAL14147.1;Name=CAL14147.1;Note=Similar to Escherichia coli selenocysteine-specific elongation factor SelB or FdhA or b3590 SWALL:SELB_ECOLI (SWALL:P14081) (614 aa) fasta scores: E(): 5.3e-65%2C 63.57 id in 626 aa%3B Similar to Yersinia pestis selenocysteinyl-tRNA-specific translation factor SelB pseudogene;gbkey=CDS;gene=selB;inference=similar to sequence:UniProtKB:P14081;product=selenocysteinyl-tRNA-specific translation factor;protein_id=CAL14147.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4521126	4521359	.	-	.	ID=id7222;Note=Pfam match to entry PF03144 GTP_EFTU_D2%2C Elongation factor Tu domain 2%2C score 40.7%2C E-value 2.1e-09;gbkey=misc_feature;gene=selB;inference=protein motif:PFAM:PF03144
AM286415.1	EMBL	sequence_feature	4521399	4521806	.	-	.	ID=id7223;Note=Pfam match to entry PF00009 GTP_EFTU%2C Elongation factor Tu GTP binding domain%2C score 8.5%2C E-value 3.7e-08;gbkey=misc_feature;gene=selB;inference=protein motif:PFAM:PF00009
AM286415.1	EMBL	sequence_feature	4521660	4521692	.	-	.	ID=id7224;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=selB;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4521908	4523296	.	-	.	ID=gene4087;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;gene_synonym=fdhA;locus_tag=YE4131
AM286415.1	EMBL	CDS	4521908	4523296	.	-	0	ID=cds3978;Parent=gene4087;Dbxref=EnsemblGenomes-Gn:YE4131,EnsemblGenomes-Tr:CAL14148,GOA:A1JT25,InterPro:IPR004534,InterPro:IPR015421,InterPro:IPR015424,InterPro:IPR018319,InterPro:IPR025862,NCBI_GP:CAL14148.1;Name=CAL14148.1;gbkey=CDS;gene=selA;product=L-seryl-tRNA selenium transferase;protein_id=CAL14148.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4521944	4523053	.	-	.	ID=id7225;Note=Pfam match to entry PF03841 SelA%2C L-seryl-tRNA selenium transferase%2C score 756.0%2C E-value 1e-224;gbkey=misc_feature;gene=selA;inference=protein motif:PFAM:PF03841
AM286415.1	EMBL	gene	4523328	4524257	.	-	.	ID=gene4088;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=YE4132
AM286415.1	EMBL	CDS	4523328	4524257	.	-	0	ID=cds3979;Parent=gene4088;Dbxref=EnsemblGenomes-Gn:YE4132,EnsemblGenomes-Tr:CAL14149,GOA:A1JT26,InterPro:IPR006452,InterPro:IPR024064,NCBI_GP:CAL14149.1;Name=CAL14149.1;gbkey=CDS;gene=fdhE;product=putative formate dehydrogenase formation protein;protein_id=CAL14149.1;transl_table=11
AM286415.1	EMBL	gene	4524257	4524907	.	-	.	ID=gene4089;Name=fdoI;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=YE4133
AM286415.1	EMBL	CDS	4524257	4524907	.	-	0	ID=cds3980;Parent=gene4089;Dbxref=EnsemblGenomes-Gn:YE4133,EnsemblGenomes-Tr:CAL14150,GOA:A1JT27,InterPro:IPR006471,InterPro:IPR016174,UniProtKB/TrEMBL:A1JT27,NCBI_GP:CAL14150.1;Name=CAL14150.1;gbkey=CDS;gene=fdoI;product=formate dehydrogenase%2C cytochrome b556 protein;protein_id=CAL14150.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4524779	4524847	.	-	.	ID=id7226;Note=4 probable transmembrane helices predicted for YE4133 by TMHMM2.0 at aa 21-43%2C 53-75%2C 114-136 and 151-173;gbkey=misc_feature;gene=fdoI;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	4524683	4524751	.	-	.	ID=id7226;Note=4 probable transmembrane helices predicted for YE4133 by TMHMM2.0 at aa 21-43%2C 53-75%2C 114-136 and 151-173;gbkey=misc_feature;gene=fdoI;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	4524500	4524568	.	-	.	ID=id7226;Note=4 probable transmembrane helices predicted for YE4133 by TMHMM2.0 at aa 21-43%2C 53-75%2C 114-136 and 151-173;gbkey=misc_feature;gene=fdoI;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	4524389	4524457	.	-	.	ID=id7226;Note=4 probable transmembrane helices predicted for YE4133 by TMHMM2.0 at aa 21-43%2C 53-75%2C 114-136 and 151-173;gbkey=misc_feature;gene=fdoI;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	gene	4524904	4525875	.	-	.	ID=gene4090;Name=fdoH;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=YE4134
AM286415.1	EMBL	CDS	4524904	4525875	.	-	0	ID=cds3981;Parent=gene4090;Dbxref=EnsemblGenomes-Gn:YE4134,EnsemblGenomes-Tr:CAL14151,GOA:A1JT28,InterPro:IPR001450,InterPro:IPR006470,InterPro:IPR014603,InterPro:IPR015246,InterPro:IPR017896,InterPro:IPR017900,UniProtKB/TrEMBL:A1JT28,NCBI_GP:CAL14151.1;Name=CAL14151.1;gbkey=CDS;gene=fdoH;product=formate dehydrogenase-O%2C iron-sulfur subunit;protein_id=CAL14151.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4525423	4525494	.	-	.	ID=id7227;Note=Pfam match to entry PF00037 fer4%2C 4Fe-4S binding domain%2C score 25.7%2C E-value 1.6e-05;gbkey=misc_feature;gene=fdoH;inference=protein motif:PFAM:PF00037
AM286415.1	EMBL	sequence_feature	4525438	4525473	.	-	.	ID=id7228;Note=PS00198 4Fe-4S ferredoxins%2C iron-sulfur binding region signature.;gbkey=misc_feature;gene=fdoH;inference=protein motif:Prosite:PS00198
AM286415.1	EMBL	gene	4525888	4528935	.	-	.	ID=gene4091;Name=fdoG;gbkey=Gene;gene=fdoG;gene_biotype=protein_coding;locus_tag=YE4135
AM286415.1	EMBL	CDS	4528351	4528935	.	-	0	ID=cds3982;Parent=gene4091;Dbxref=EnsemblGenomes-Gn:YE4135,EnsemblGenomes-Tr:CAL14152,GOA:A1JT30,InterPro:IPR006311,InterPro:IPR006443,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR027467,UniProtKB/TrEMBL:A1JT30,NCBI_GP:CAL14152.1;Name=CAL14152.1;Note=Similar to Escherichia coli formate dehydrogenase-o%2C major subunit fdoG or b3894 SWALL:FDOG_ECOLI (SWALL:P32176) (1016 aa) fasta scores: E(): 0%2C 86.51 38d in 1016 aa%2C and to Salmonella typhi formate dehydrogenase-o%2C major subunit fdoG or sty3839 SWALL:Q8Z2U6 (EMBL:AL627279) (1016 aa) fasta scores: E(): 0%2C 86.61 38d in 1016 aa%3B Major subunit of formate dehydrogenase contains an in-frame opal (UGA) codon. In E.coli formate dehydrogenase the opal stop codon is read-through by a selenocysteine tRNA;gbkey=CDS;gene=fdoG;inference=similar to sequence:UniProtKB:P32176;product=formate dehydrogenase-o%2C major subunit;protein_id=CAL14152.1;transl_table=11
AM286415.1	EMBL	CDS	4525888	4528347	.	-	0	ID=cds3982;Parent=gene4091;Dbxref=EnsemblGenomes-Gn:YE4135,EnsemblGenomes-Tr:CAL14152,GOA:A1JT30,InterPro:IPR006311,InterPro:IPR006443,InterPro:IPR006655,InterPro:IPR006656,InterPro:IPR006657,InterPro:IPR006963,InterPro:IPR009010,InterPro:IPR027467,UniProtKB/TrEMBL:A1JT30,NCBI_GP:CAL14152.1;Name=CAL14152.1;Note=Similar to Escherichia coli formate dehydrogenase-o%2C major subunit fdoG or b3894 SWALL:FDOG_ECOLI (SWALL:P32176) (1016 aa) fasta scores: E(): 0%2C 86.51 38d in 1016 aa%2C and to Salmonella typhi formate dehydrogenase-o%2C major subunit fdoG or sty3839 SWALL:Q8Z2U6 (EMBL:AL627279) (1016 aa) fasta scores: E(): 0%2C 86.61 38d in 1016 aa%3B Major subunit of formate dehydrogenase contains an in-frame opal (UGA) codon. In E.coli formate dehydrogenase the opal stop codon is read-through by a selenocysteine tRNA;gbkey=CDS;gene=fdoG;inference=similar to sequence:UniProtKB:P32176;product=formate dehydrogenase-o%2C major subunit;protein_id=CAL14152.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4525909	4526268	.	-	.	ID=id7229;Note=Pfam match to entry PF01568 Molydop_binding%2CMolydopterin dinucleotide binding domain%2C score 157.2%2CE-value 1.8e-44;gbkey=misc_feature;gene=fdoG;inference=protein motif:PFAM:PF01568
AM286415.1	EMBL	sequence_feature	4526074	4526157	.	-	.	ID=id7230;Note=PS00932 Prokaryotic molybdopterin oxidoreductases signature 3.;gbkey=misc_feature;gene=fdoG;inference=protein motif:Prosite:PS00932
AM286415.1	EMBL	sequence_feature	4526707	4528299	.	-	.	ID=id7231;Note=Pfam match to entry PF00384 molybdopterin%2CMolybdopterin oxidoreductase%2C score -175.7%2C E-value 9.1e-07;gbkey=misc_feature;gene=fdoG;inference=protein motif:PFAM:PF00384
AM286415.1	EMBL	sequence_feature	4528519	4528809	.	-	.	ID=id7232;Note=Pfam match to entry PF00384 molybdopterin%2CMolybdopterin oxidoreductase%2C score 66.4%2C E-value 1.5e-18;gbkey=misc_feature;gene=fdoG;inference=protein motif:PFAM:PF00384
AM286415.1	EMBL	sequence_feature	4528738	4528794	.	-	.	ID=id7233;Note=PS00551 Prokaryotic molybdopterin oxidoreductases signature 1.;gbkey=misc_feature;gene=fdoG;inference=protein motif:Prosite:PS00551
AM286415.1	EMBL	gene	4529146	4529973	.	+	.	ID=gene4092;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=YE4137
AM286415.1	EMBL	CDS	4529146	4529973	.	+	0	ID=cds3983;Parent=gene4092;Dbxref=EnsemblGenomes-Gn:YE4137,EnsemblGenomes-Tr:CAL14153,GOA:A1JT32,InterPro:IPR003786,InterPro:IPR016193,NCBI_GP:CAL14153.1;Name=CAL14153.1;gbkey=CDS;gene=fdhD;product=putative formate dehydrogenase;protein_id=CAL14153.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4529227	4529958	.	+	.	ID=id7234;Note=Pfam match to entry PF02634 FdhD-NarQ%2C FdhD/NarQ family%2C score 411.7%2C E-value 4.5e-121;gbkey=misc_feature;gene=fdhD;inference=protein motif:PFAM:PF02634
AM286415.1	EMBL	gene	4530100	4530723	.	+	.	ID=gene4093;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=YE4138
AM286415.1	EMBL	CDS	4530100	4530723	.	+	0	ID=cds3984;Parent=gene4093;Dbxref=EnsemblGenomes-Gn:YE4138,EnsemblGenomes-Tr:CAL14154,GOA:A1JT34,InterPro:IPR001189,InterPro:IPR019831,InterPro:IPR019832,InterPro:IPR019833,UniProtKB/TrEMBL:A1JT34,NCBI_GP:CAL14154.1;Name=CAL14154.1;gbkey=CDS;gene=sodA;product=superoxide dismutase [Mn];protein_id=CAL14154.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4530100	4530369	.	+	.	ID=id7235;Note=Pfam match to entry PF00081 sodfe%2C Iron/manganese superoxide dismutases%2C alpha-hairpin domain%2C score 174.1%2CE-value 1.5e-49;gbkey=misc_feature;gene=sodA;inference=protein motif:PFAM:PF00081
AM286415.1	EMBL	sequence_feature	4530373	4530717	.	+	.	ID=id7236;Note=Pfam match to entry PF02777 sodfe_C%2C Iron/manganese superoxide dismutases%2C C-terminal domain%2C score 240.5%2CE-value 1.6e-69;gbkey=misc_feature;gene=sodA;inference=protein motif:PFAM:PF02777
AM286415.1	EMBL	sequence_feature	4530604	4530627	.	+	.	ID=id7237;Note=PS00088 Manganese and iron superoxide dismutases signature.;gbkey=misc_feature;gene=sodA;inference=protein motif:Prosite:PS00088
AM286415.1	EMBL	gene	4531081	4533030	.	+	.	ID=gene4094;Name=tar;gbkey=Gene;gene=tar;gene_biotype=protein_coding;gene_synonym=cheM;locus_tag=YE4139
AM286415.1	EMBL	CDS	4531081	4533030	.	+	0	ID=cds3985;Parent=gene4094;Dbxref=EnsemblGenomes-Gn:YE4139,EnsemblGenomes-Tr:CAL14155,GOA:A1JT36,InterPro:IPR000727,InterPro:IPR003660,InterPro:IPR004089,InterPro:IPR004090,UniProtKB/TrEMBL:A1JT36,NCBI_GP:CAL14155.1;Name=CAL14155.1;gbkey=CDS;gene=tar;product=methyl-accepting chemotaxis protein II;protein_id=CAL14155.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4531138	4531206	.	+	.	ID=id7238;Note=1 probable transmembrane helix predicted for YE4139 by TMHMM2.0 at aa 20-42;gbkey=misc_feature;gene=tar;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	sequence_feature	4531948	4532157	.	+	.	ID=id7239;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 52.2%2C E-value 7.2e-13;gbkey=misc_feature;gene=tar;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	4532218	4532916	.	+	.	ID=id7240;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 378.4%2C E-value 4.6e-111;gbkey=misc_feature;gene=tar;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	gene	4533109	4533780	.	+	.	ID=gene4095;Name=YE4140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4140
AM286415.1	EMBL	CDS	4533109	4533780	.	+	0	ID=cds3986;Parent=gene4095;Dbxref=EnsemblGenomes-Gn:YE4140,EnsemblGenomes-Tr:CAL14156,GOA:A1JT37,InterPro:IPR005163,InterPro:IPR005302,InterPro:IPR011037,InterPro:IPR015808,UniProtKB/TrEMBL:A1JT37,NCBI_GP:CAL14156.1;Name=CAL14156.1;Note=Similar to Salmonella typhi hypothetical protein Sty3815 sty3815 SWALL:Q8Z2W0 (EMBL:AL627279) (250 aa) fasta scores: E(): 3.4e-65%2C 69.5 38d in 223 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL627279;product=conserved hypothetical protein;protein_id=CAL14156.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4533211	4533606	.	+	.	ID=id7241;Note=Pfam match to entry PF03473 MOSC%2C MOSC domain %2Cscore 134.7%2C E-value 1.1e-37;gbkey=misc_feature;inference=protein motif:PFAM:PF03473
AM286415.1	EMBL	sequence_feature	4533607	4533747	.	+	.	ID=id7242;Note=Pfam match to entry PF03475 3-alpha%2C 3-alpha domain%2C score 39.0%2C E-value 7e-09;gbkey=misc_feature;inference=protein motif:PFAM:PF03475
AM286415.1	EMBL	gene	4533934	4534353	.	-	.	ID=gene4096;Name=YE4141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4141
AM286415.1	EMBL	CDS	4533934	4534353	.	-	0	ID=cds3987;Parent=gene4096;Dbxref=EnsemblGenomes-Gn:YE4141,EnsemblGenomes-Tr:CAL14157,InterPro:IPR002716,InterPro:IPR029060,UniProtKB/TrEMBL:A1JT39,NCBI_GP:CAL14157.1;Name=CAL14157.1;Note=Similar to Salmonella typhimurium McK protein SWALL:BAB91602 (EMBL:AP005147) (138 aa) fasta scores: E(): 1.3e-33%2C 65.94 38d in 138 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP005147;product=Hypothetical protein;protein_id=CAL14157.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4533943	4534338	.	-	.	ID=id7243;Note=Pfam match to entry PF01850 PIN%2C PIN domain%2C score 69.5%2C E-value 4.6e-18;gbkey=misc_feature;inference=protein motif:PFAM:PF01850
AM286415.1	EMBL	gene	4534350	4534748	.	-	.	ID=gene4097;Name=YE4142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4142
AM286415.1	EMBL	CDS	4534350	4534748	.	-	0	ID=cds3988;Parent=gene4097;Dbxref=EnsemblGenomes-Gn:YE4142,EnsemblGenomes-Tr:CAL14158,InterPro:IPR007159,UniProtKB/TrEMBL:A1JT40,NCBI_GP:CAL14158.1;Name=CAL14158.1;Note=may have alternative start site at 4534577;gbkey=CDS;product=Hypothetical protein;protein_id=CAL14158.1;transl_table=11
AM286415.1	EMBL	gene	4534879	4535235	.	-	.	ID=gene4098;Name=YE4143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4143
AM286415.1	EMBL	CDS	4534879	4535235	.	-	0	ID=cds3989;Parent=gene4098;Dbxref=EnsemblGenomes-Gn:YE4143,EnsemblGenomes-Tr:CAL14159,InterPro:IPR021230,UniProtKB/TrEMBL:A1JT41,NCBI_GP:CAL14159.1;Name=CAL14159.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14159.1;transl_table=11
AM286415.1	EMBL	gene	4535328	4536809	.	-	.	ID=gene4099;Name=YE4144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4144
AM286415.1	EMBL	CDS	4535328	4536809	.	-	0	ID=cds3990;Parent=gene4099;Dbxref=EnsemblGenomes-Gn:YE4144,EnsemblGenomes-Tr:CAL14160,GOA:A1JT42,InterPro:IPR000524,InterPro:IPR004839,InterPro:IPR011991,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JT42,NCBI_GP:CAL14160.1;Name=CAL14160.1;Note=Similar to Pseudomonas aeruginosa hypothetical protein Pa4132 SWALL:Q9HWP9 (EMBL:AE004829) (471 aa) fasta scores: E(): 2.7e-65%2C 39.87 38d in 474 aa%2C and to Ralstonia solanacearum putative transcription regulator protein rsc0599 or rs04846 SWALL:Q8Y1U0 (EMBL:AL646060) (504 aa) fasta scores: E(): 4.9e-64%2C 39.19 38d in 472 aa;gbkey=CDS;inference=similar to sequence:INSDC:AL646060;product=Putative transcriptional regulator;protein_id=CAL14160.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4535406	4536317	.	-	.	ID=id7244;Note=Pfam match to entry PF00155 aminotran_1_2%2CAminotransferase class I and II%2C score 6.9%2C E-value 5.3e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00155
AM286415.1	EMBL	sequence_feature	4535409	4535438	.	-	.	ID=id7245;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	sequence_feature	4536594	4536773	.	-	.	ID=id7246;Note=Pfam match to entry PF00392 gntR%2C Bacterial regulatory proteins%2C gntR family%2C score 44.5%2C E-value 1.5e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00392
AM286415.1	EMBL	gene	4536915	4537565	.	+	.	ID=gene4100;Name=YE4145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4145
AM286415.1	EMBL	CDS	4536915	4537565	.	+	0	ID=cds3991;Parent=gene4100;Dbxref=EnsemblGenomes-Gn:YE4145,EnsemblGenomes-Tr:CAL14161,GOA:A1JT44,InterPro:IPR001123,UniProtKB/TrEMBL:A1JT44,NCBI_GP:CAL14161.1;Name=CAL14161.1;Note=Similar to Rhizobium loti hypothetical protein Mll1430 SWALL:Q98KK8 (EMBL:AP002997) (198 aa) fasta scores: E(): 1e-23%2C 43.52 38d in 193 aa;gbkey=CDS;inference=similar to sequence:INSDC:AP002997;product=Putative inner membrane protein;protein_id=CAL14161.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4536972	4537040	.	+	.	ID=id7247;Note=6 probable transmembrane helices predicted for YE4145 by TMHMM2.0 at aa 20-42%2C 54-76%2C 80-99%2C 120-142%2C152-174 and 187-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4537074	4537142	.	+	.	ID=id7247;Note=6 probable transmembrane helices predicted for YE4145 by TMHMM2.0 at aa 20-42%2C 54-76%2C 80-99%2C 120-142%2C152-174 and 187-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4537152	4537211	.	+	.	ID=id7247;Note=6 probable transmembrane helices predicted for YE4145 by TMHMM2.0 at aa 20-42%2C 54-76%2C 80-99%2C 120-142%2C152-174 and 187-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4537272	4537340	.	+	.	ID=id7247;Note=6 probable transmembrane helices predicted for YE4145 by TMHMM2.0 at aa 20-42%2C 54-76%2C 80-99%2C 120-142%2C152-174 and 187-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4537368	4537436	.	+	.	ID=id7247;Note=6 probable transmembrane helices predicted for YE4145 by TMHMM2.0 at aa 20-42%2C 54-76%2C 80-99%2C 120-142%2C152-174 and 187-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4537473	4537532	.	+	.	ID=id7247;Note=6 probable transmembrane helices predicted for YE4145 by TMHMM2.0 at aa 20-42%2C 54-76%2C 80-99%2C 120-142%2C152-174 and 187-206;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	gene	4537562	4538116	.	-	.	ID=gene4101;Name=mtlR;gbkey=Gene;gene=mtlR;gene_biotype=protein_coding;locus_tag=YE4146
AM286415.1	EMBL	CDS	4537562	4538116	.	-	0	ID=cds3992;Parent=gene4101;Dbxref=EnsemblGenomes-Gn:YE4146,EnsemblGenomes-Tr:CAL14162,InterPro:IPR007761,UniProtKB/TrEMBL:A1JT45,NCBI_GP:CAL14162.1;Name=CAL14162.1;gbkey=CDS;gene=mtlR;product=mannitol operon repressor;protein_id=CAL14162.1;transl_table=11
AM286415.1	EMBL	gene	4538231	4539394	.	-	.	ID=gene4102;Name=mtlD;gbkey=Gene;gene=mtlD;gene_biotype=protein_coding;locus_tag=YE4147
AM286415.1	EMBL	CDS	4538231	4539394	.	-	0	ID=cds3993;Parent=gene4102;Dbxref=EnsemblGenomes-Gn:YE4147,EnsemblGenomes-Tr:CAL14163,GOA:A1JT46,InterPro:IPR000669,InterPro:IPR008927,InterPro:IPR013118,InterPro:IPR013131,InterPro:IPR013328,InterPro:IPR016040,InterPro:IPR023027,InterPro:IPR023028,NCBI_GP:CAL14163.1;Name=CAL14163.1;gbkey=CDS;gene=mtlD;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=CAL14163.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4538318	4539394	.	-	.	ID=id7248;Note=Pfam match to entry PF01232 Mannitol_dh%2C Mannitol dehydrogenase%2C score 522.4%2C E-value 2.2e-154;gbkey=misc_feature;gene=mtlD;inference=protein motif:PFAM:PF01232
AM286415.1	EMBL	sequence_feature	4538909	4538947	.	-	.	ID=id7249;Note=PS00974 Mannitol dehydrogenases signature.;gbkey=misc_feature;gene=mtlD;inference=protein motif:Prosite:PS00974
AM286415.1	EMBL	gene	4539627	4541549	.	-	.	ID=gene4103;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=YE4148
AM286415.1	EMBL	CDS	4539627	4541549	.	-	0	ID=cds3994;Parent=gene4103;Dbxref=EnsemblGenomes-Gn:YE4148,EnsemblGenomes-Tr:CAL14164,GOA:A1JT47,InterPro:IPR002178,InterPro:IPR003352,InterPro:IPR003501,InterPro:IPR004718,InterPro:IPR013011,InterPro:IPR013014,InterPro:IPR016152,InterPro:IPR029503,UniProtKB/TrEMBL:A1JT47,NCBI_GP:CAL14164.1;Name=CAL14164.1;gbkey=CDS;gene=mtlA;product=PTS system%2C mannitol-specific IIABC component;protein_id=CAL14164.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4539633	4540061	.	-	.	ID=id7250;Note=Pfam match to entry PF00359 PTS_EIIA_2%2CPhosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2%2C score 277.4%2C E-value 1.2e-80;gbkey=misc_feature;gene=mtlA;inference=protein motif:PFAM:PF00359
AM286415.1	EMBL	sequence_feature	4539876	4539926	.	-	.	ID=id7251;Note=PS00372 PTS EIIA domains phosphorylation site signature 2.;gbkey=misc_feature;gene=mtlA;inference=protein motif:Prosite:PS00372
AM286415.1	EMBL	sequence_feature	4541421	4541489	.	-	.	ID=id7252;Note=9 probable transmembrane helices predicted for YE4148 by TMHMM2.0 at aa 21-43%2C 53-75%2C 88-110%2C 137-159%2C172-194%2C 214-236%2C 243-265%2C 270-292 and 313-335;gbkey=misc_feature;gene=mtlA;inference=protein motif:TMHMM:2.0;part=1/9
AM286415.1	EMBL	sequence_feature	4541325	4541393	.	-	.	ID=id7252;Note=9 probable transmembrane helices predicted for YE4148 by TMHMM2.0 at aa 21-43%2C 53-75%2C 88-110%2C 137-159%2C172-194%2C 214-236%2C 243-265%2C 270-292 and 313-335;gbkey=misc_feature;gene=mtlA;inference=protein motif:TMHMM:2.0;part=2/9
AM286415.1	EMBL	sequence_feature	4541220	4541288	.	-	.	ID=id7252;Note=9 probable transmembrane helices predicted for YE4148 by TMHMM2.0 at aa 21-43%2C 53-75%2C 88-110%2C 137-159%2C172-194%2C 214-236%2C 243-265%2C 270-292 and 313-335;gbkey=misc_feature;gene=mtlA;inference=protein motif:TMHMM:2.0;part=3/9
AM286415.1	EMBL	sequence_feature	4541073	4541141	.	-	.	ID=id7252;Note=9 probable transmembrane helices predicted for YE4148 by TMHMM2.0 at aa 21-43%2C 53-75%2C 88-110%2C 137-159%2C172-194%2C 214-236%2C 243-265%2C 270-292 and 313-335;gbkey=misc_feature;gene=mtlA;inference=protein motif:TMHMM:2.0;part=4/9
AM286415.1	EMBL	sequence_feature	4540968	4541036	.	-	.	ID=id7252;Note=9 probable transmembrane helices predicted for YE4148 by TMHMM2.0 at aa 21-43%2C 53-75%2C 88-110%2C 137-159%2C172-194%2C 214-236%2C 243-265%2C 270-292 and 313-335;gbkey=misc_feature;gene=mtlA;inference=protein motif:TMHMM:2.0;part=5/9
AM286415.1	EMBL	sequence_feature	4540842	4540910	.	-	.	ID=id7252;Note=9 probable transmembrane helices predicted for YE4148 by TMHMM2.0 at aa 21-43%2C 53-75%2C 88-110%2C 137-159%2C172-194%2C 214-236%2C 243-265%2C 270-292 and 313-335;gbkey=misc_feature;gene=mtlA;inference=protein motif:TMHMM:2.0;part=6/9
AM286415.1	EMBL	sequence_feature	4540755	4540823	.	-	.	ID=id7252;Note=9 probable transmembrane helices predicted for YE4148 by TMHMM2.0 at aa 21-43%2C 53-75%2C 88-110%2C 137-159%2C172-194%2C 214-236%2C 243-265%2C 270-292 and 313-335;gbkey=misc_feature;gene=mtlA;inference=protein motif:TMHMM:2.0;part=7/9
AM286415.1	EMBL	sequence_feature	4540674	4540742	.	-	.	ID=id7252;Note=9 probable transmembrane helices predicted for YE4148 by TMHMM2.0 at aa 21-43%2C 53-75%2C 88-110%2C 137-159%2C172-194%2C 214-236%2C 243-265%2C 270-292 and 313-335;gbkey=misc_feature;gene=mtlA;inference=protein motif:TMHMM:2.0;part=8/9
AM286415.1	EMBL	sequence_feature	4540545	4540613	.	-	.	ID=id7252;Note=9 probable transmembrane helices predicted for YE4148 by TMHMM2.0 at aa 21-43%2C 53-75%2C 88-110%2C 137-159%2C172-194%2C 214-236%2C 243-265%2C 270-292 and 313-335;gbkey=misc_feature;gene=mtlA;inference=protein motif:TMHMM:2.0;part=9/9
AM286415.1	EMBL	gene	4542569	4543288	.	-	.	ID=gene4104;Name=yiaF;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=YE4149
AM286415.1	EMBL	CDS	4542569	4543288	.	-	0	ID=cds3995;Parent=gene4104;Dbxref=EnsemblGenomes-Gn:YE4149,EnsemblGenomes-Tr:CAL14165,InterPro:IPR021413,UniProtKB/TrEMBL:A1JT49,NCBI_GP:CAL14165.1;Name=CAL14165.1;gbkey=CDS;gene=yiaF;product=putative exported protein;protein_id=CAL14165.1;transl_table=11
AM286415.1	EMBL	gene	4543536	4545605	.	-	.	ID=gene4105;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=YE4150
AM286415.1	EMBL	CDS	4543536	4545605	.	-	0	ID=cds3996;Parent=gene4105;Dbxref=EnsemblGenomes-Gn:YE4150,EnsemblGenomes-Tr:CAL14166,GOA:A1JT50,InterPro:IPR006194,InterPro:IPR008909,InterPro:IPR009080,InterPro:IPR015944,NCBI_GP:CAL14166.1;Name=CAL14166.1;gbkey=CDS;gene=glyS;product=glycyl-tRNA synthetase beta subunit;protein_id=CAL14166.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4543938	4545590	.	-	.	ID=id7253;Note=Pfam match to entry PF02092 tRNA_synt_2f%2CGlycyl-tRNA synthetase beta subunit%2C score 1142.4%2CE-value 0;gbkey=misc_feature;gene=glyS;inference=protein motif:PFAM:PF02092
AM286415.1	EMBL	gene	4545615	4546529	.	-	.	ID=gene4106;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=YE4151
AM286415.1	EMBL	CDS	4545615	4546529	.	-	0	ID=cds3997;Parent=gene4106;Dbxref=EnsemblGenomes-Gn:YE4151,EnsemblGenomes-Tr:CAL14167,GOA:A1JT51,InterPro:IPR002310,InterPro:IPR006194,NCBI_GP:CAL14167.1;Name=CAL14167.1;gbkey=CDS;gene=glyQ;product=glycyl-tRNA synthetase alpha subunit;protein_id=CAL14167.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4545636	4546505	.	-	.	ID=id7254;Note=Pfam match to entry PF02091 tRNA_synt_2e%2CGlycyl-tRNA synthetase alpha subunit%2C score 821.7%2CE-value 1.7e-244;gbkey=misc_feature;gene=glyQ;inference=protein motif:PFAM:PF02091
AM286415.1	EMBL	sequence_feature	4546011	4546040	.	-	.	ID=id7255;Note=PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.;gbkey=misc_feature;gene=glyQ;inference=protein motif:Prosite:PS00339
AM286415.1	EMBL	gene	4546786	4547358	.	+	.	ID=gene4107;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=YE4152
AM286415.1	EMBL	CDS	4546786	4547358	.	+	0	ID=cds3998;Parent=gene4107;Dbxref=EnsemblGenomes-Gn:YE4152,EnsemblGenomes-Tr:CAL14168,GOA:A1JT52,InterPro:IPR004597,InterPro:IPR005019,InterPro:IPR011257,UniProtKB/TrEMBL:A1JT52,NCBI_GP:CAL14168.1;Name=CAL14168.1;gbkey=CDS;gene=tag;product=DNA-3-methyladenine glycosylase;protein_id=CAL14168.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4546807	4547343	.	+	.	ID=id7256;Note=Pfam match to entry PF03352 Adenine_glyco%2CMethyladenine glycosylase%2C score 392.0%2C E-value 3.8e-115;gbkey=misc_feature;gene=tag;inference=protein motif:PFAM:PF03352
AM286415.1	EMBL	gene	4547355	4547810	.	+	.	ID=gene4108;Name=YE4153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4153
AM286415.1	EMBL	CDS	4547355	4547810	.	+	0	ID=cds3999;Parent=gene4108;Dbxref=EnsemblGenomes-Gn:YE4153,EnsemblGenomes-Tr:CAL14169,GOA:A1JT54,InterPro:IPR000182,InterPro:IPR016181,UniProtKB/TrEMBL:A1JT54,NCBI_GP:CAL14169.1;Name=CAL14169.1;gbkey=CDS;product=putative acetyltransferase;protein_id=CAL14169.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4547523	4547735	.	+	.	ID=id7257;Note=Pfam match to entry PF00583 Acetyltransf%2CAcetyltransferase (GNAT) family%2C score 56.5%2C E-value 3.9e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00583
AM286415.1	EMBL	gene	4547924	4549378	.	+	.	ID=gene4109;Name=YE4154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4154
AM286415.1	EMBL	CDS	4547924	4549378	.	+	0	ID=cds4000;Parent=gene4109;Dbxref=EnsemblGenomes-Gn:YE4154,EnsemblGenomes-Tr:CAL14170,InterPro:IPR016181,UniProtKB/TrEMBL:A1JT55,NCBI_GP:CAL14170.1;Name=CAL14170.1;Note=Similar to Yersinia pestis putative exported protein ypo2884 SWALL:Q8ZCT1 (EMBL:AJ414154) (806 aa) fasta scores: E(): 5.6e-49%2C 38.06 38d in 444 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414154;product=Putative exported protein;protein_id=CAL14170.1;transl_table=11
AM286415.1	EMBL	gene	4549470	4551641	.	+	.	ID=gene4110;Name=YE4155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4155
AM286415.1	EMBL	CDS	4549470	4551641	.	+	0	ID=cds4001;Parent=gene4110;Dbxref=EnsemblGenomes-Gn:YE4155,EnsemblGenomes-Tr:CAL14171,InterPro:IPR011024,InterPro:IPR016181,UniProtKB/TrEMBL:A1JT56,NCBI_GP:CAL14171.1;Name=CAL14171.1;Note=Similar to Yersinia pestis hypothetical protein Ypo0466 ypo0466 SWALL:Q8ZIM9 (EMBL:AJ414142) (815 aa) fasta scores: E(): 2.1e-67%2C 31.79 38d in 717 aa;gbkey=CDS;inference=similar to sequence:INSDC:AJ414142;product=Putative exported protein;protein_id=CAL14171.1;transl_table=11
AM286415.1	EMBL	gene	4551867	4552526	.	+	.	ID=gene4111;Name=yiaD;gbkey=Gene;gene=yiaD;gene_biotype=protein_coding;locus_tag=YE4156
AM286415.1	EMBL	CDS	4551867	4552526	.	+	0	ID=cds4002;Parent=gene4111;Dbxref=EnsemblGenomes-Gn:YE4156,EnsemblGenomes-Tr:CAL14172,GOA:A1JT57,InterPro:IPR006664,InterPro:IPR006665,UniProtKB/TrEMBL:A1JT57,NCBI_GP:CAL14172.1;Name=CAL14172.1;gbkey=CDS;gene=yiaD;product=putative lipoprotein;protein_id=CAL14172.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4551879	4551947	.	+	.	ID=id7258;Note=3 probable transmembrane helices predicted for YE4156 by TMHMM2.0 at aa 5-27%2C 37-55 and 62-81;gbkey=misc_feature;gene=yiaD;inference=protein motif:TMHMM:2.0;part=1/3
AM286415.1	EMBL	sequence_feature	4551975	4552031	.	+	.	ID=id7258;Note=3 probable transmembrane helices predicted for YE4156 by TMHMM2.0 at aa 5-27%2C 37-55 and 62-81;gbkey=misc_feature;gene=yiaD;inference=protein motif:TMHMM:2.0;part=2/3
AM286415.1	EMBL	sequence_feature	4552050	4552109	.	+	.	ID=id7258;Note=3 probable transmembrane helices predicted for YE4156 by TMHMM2.0 at aa 5-27%2C 37-55 and 62-81;gbkey=misc_feature;gene=yiaD;inference=protein motif:TMHMM:2.0;part=3/3
AM286415.1	EMBL	sequence_feature	4551897	4551929	.	+	.	ID=id7259;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yiaD;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	sequence_feature	4551948	4551971	.	+	.	ID=id7260;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=yiaD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4552209	4552496	.	+	.	ID=id7261;Note=Pfam match to entry PF00691 OmpA%2C OmpA family %2Cscore 141.0%2C E-value 1.4e-39;gbkey=misc_feature;gene=yiaD;inference=protein motif:PFAM:PF00691
AM286415.1	EMBL	gene	4552603	4553247	.	-	.	ID=gene4112;Name=YE4157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4157
AM286415.1	EMBL	CDS	4552603	4553247	.	-	0	ID=cds4003;Parent=gene4112;Dbxref=EnsemblGenomes-Gn:YE4157,EnsemblGenomes-Tr:CAL14173,InterPro:IPR011991,UniProtKB/TrEMBL:A1JT59,NCBI_GP:CAL14173.1;Name=CAL14173.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14173.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4552723	4552755	.	-	.	ID=id7262;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4553427	4554887	.	+	.	ID=gene4113;Name=YE4158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4158
AM286415.1	EMBL	CDS	4553427	4554887	.	+	0	ID=cds4004;Parent=gene4113;Dbxref=EnsemblGenomes-Gn:YE4158,EnsemblGenomes-Tr:CAL14174,GOA:A1JT61,InterPro:IPR011701,InterPro:IPR016196,InterPro:IPR020846,UniProtKB/TrEMBL:A1JT61,NCBI_GP:CAL14174.1;Name=CAL14174.1;Note=Similar to Ralstonia solanacearum putative transport transmembrane protein rsc2324 or rs01224 SWALL:Q8XWZ4 (EMBL:AL646069) (475 aa) fasta scores: E(): 2.8e-74%2C 46.55 38d in 464 aa%2C and to Mycobacterium tuberculosis hypothetical 47.7 kDa protein rv1634 or mtcy01b2.26 or mt1670 SWALL:O06151 (EMBL:Z95554) (471 aa) fasta scores: E(): 1.6e-47%2C 34.25 38d in 470 aa;gbkey=CDS;inference=similar to sequence:INSDC:Z95554;product=Putative transport protein;protein_id=CAL14174.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4553478	4554824	.	+	.	ID=id7263;Note=Pfam match to entry PF00083 sugar_tr%2C Sugar (and other) transporter%2C score -103.2%2C E-value 0.00033;gbkey=misc_feature;inference=protein motif:PFAM:PF00083
AM286415.1	EMBL	sequence_feature	4553484	4553552	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/14
AM286415.1	EMBL	sequence_feature	4553580	4553648	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/14
AM286415.1	EMBL	sequence_feature	4553685	4553753	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/14
AM286415.1	EMBL	sequence_feature	4553766	4553834	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/14
AM286415.1	EMBL	sequence_feature	4553853	4553921	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/14
AM286415.1	EMBL	sequence_feature	4553934	4554002	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=6/14
AM286415.1	EMBL	sequence_feature	4554036	4554104	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=7/14
AM286415.1	EMBL	sequence_feature	4554114	4554182	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=8/14
AM286415.1	EMBL	sequence_feature	4554243	4554311	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=9/14
AM286415.1	EMBL	sequence_feature	4554348	4554416	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=10/14
AM286415.1	EMBL	sequence_feature	4554435	4554503	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=11/14
AM286415.1	EMBL	sequence_feature	4554531	4554599	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=12/14
AM286415.1	EMBL	sequence_feature	4554636	4554704	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=13/14
AM286415.1	EMBL	sequence_feature	4554762	4554830	.	+	.	ID=id7264;Note=14 probable transmembrane helices predicted for YE4158 by TMHMM2.0 at aa 20-42%2C 52-74%2C 87-109%2C 114-136%2C143-165%2C 170-192%2C 204-226%2C 230-252%2C 273-295%2C 308-330%2C337-359%2C 369-391%2C 404-426 and 446-468;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=14/14
AM286415.1	EMBL	gene	4555157	4556137	.	+	.	ID=gene4114;Name=YE4159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4159
AM286415.1	EMBL	CDS	4555157	4556137	.	+	0	ID=cds4005;Parent=gene4114;Dbxref=EnsemblGenomes-Gn:YE4159,EnsemblGenomes-Tr:CAL14175,GOA:A1JT62,InterPro:IPR006139,InterPro:IPR006140,InterPro:IPR016040,InterPro:IPR023756,InterPro:IPR029752,InterPro:IPR029753,NCBI_GP:CAL14175.1;Name=CAL14175.1;gbkey=CDS;product=putative D-isomer specific 2-hydroxyacid dehydrogenase;protein_id=CAL14175.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4555163	4555447	.	+	.	ID=id7265;Note=Pfam match to entry PF00389 2-Hacid_DH%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain %2Cscore 81.0%2C E-value 1.6e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00389
AM286415.1	EMBL	sequence_feature	4555451	4556011	.	+	.	ID=id7266;Note=Pfam match to entry PF02826 2-Hacid_DH_C%2C D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD binding domain %2Cscore 274.7%2C E-value 7.9e-80;gbkey=misc_feature;inference=protein motif:PFAM:PF02826
AM286415.1	EMBL	sequence_feature	4555598	4555684	.	+	.	ID=id7267;Note=PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00065
AM286415.1	EMBL	sequence_feature	4555832	4555882	.	+	.	ID=id7268;Note=PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3.;gbkey=misc_feature;inference=protein motif:Prosite:PS00671
AM286415.1	EMBL	gene	4556286	4558352	.	+	.	ID=gene4115;Name=malS;gbkey=Gene;gene=malS;gene_biotype=protein_coding;locus_tag=YE4160
AM286415.1	EMBL	CDS	4556286	4558352	.	+	0	ID=cds4006;Parent=gene4115;Dbxref=EnsemblGenomes-Gn:YE4160,EnsemblGenomes-Tr:CAL14176,GOA:A1JT64,InterPro:IPR006047,InterPro:IPR006589,InterPro:IPR013781,InterPro:IPR014635,InterPro:IPR015902,InterPro:IPR017853,UniProtKB/TrEMBL:A1JT64,NCBI_GP:CAL14176.1;Name=CAL14176.1;gbkey=CDS;gene=malS;product=alpha-amylase protein;protein_id=CAL14176.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4556871	4558226	.	+	.	ID=id7269;Note=Pfam match to entry PF00128 alpha-amylase%2C Alpha amylase%2C catalytic domain%2C score 278.8%2C E-value 4.5e-81;gbkey=misc_feature;gene=malS;inference=protein motif:PFAM:PF00128
AM286415.1	EMBL	gene	4558487	4559740	.	+	.	ID=gene4116;Name=avtA;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=YE4161
AM286415.1	EMBL	CDS	4558487	4559740	.	+	0	ID=cds4007;Parent=gene4116;Dbxref=EnsemblGenomes-Gn:YE4161,EnsemblGenomes-Tr:CAL14177,GOA:A1JT65,InterPro:IPR004839,InterPro:IPR015421,InterPro:IPR015422,InterPro:IPR015424,UniProtKB/TrEMBL:A1JT65,NCBI_GP:CAL14177.1;Name=CAL14177.1;gbkey=CDS;gene=avtA;product=valine--pyruvate aminotransferase;protein_id=CAL14177.1;transl_table=11
AM286415.1	EMBL	gene	4559886	4561544	.	-	.	ID=gene4117;Name=yidE;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=YE4162
AM286415.1	EMBL	CDS	4559886	4561544	.	-	0	ID=cds4008;Parent=gene4117;Dbxref=EnsemblGenomes-Gn:YE4162,EnsemblGenomes-Tr:CAL14178,GOA:A1JT67,InterPro:IPR006037,InterPro:IPR006512,InterPro:IPR023018,NCBI_GP:CAL14178.1;Name=CAL14178.1;gbkey=CDS;gene=yidE;product=putative membrane protein;protein_id=CAL14178.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4561482	4561535	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=1/11
AM286415.1	EMBL	sequence_feature	4561401	4561469	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=2/11
AM286415.1	EMBL	sequence_feature	4561296	4561364	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=3/11
AM286415.1	EMBL	sequence_feature	4561209	4561277	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=4/11
AM286415.1	EMBL	sequence_feature	4560999	4561067	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=5/11
AM286415.1	EMBL	sequence_feature	4560366	4560434	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=6/11
AM286415.1	EMBL	sequence_feature	4560288	4560356	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=7/11
AM286415.1	EMBL	sequence_feature	4560201	4560254	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=8/11
AM286415.1	EMBL	sequence_feature	4560090	4560158	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=9/11
AM286415.1	EMBL	sequence_feature	4560006	4560071	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=10/11
AM286415.1	EMBL	sequence_feature	4559895	4559963	.	-	.	ID=id7270;Note=11 probable transmembrane helices predicted for YE4162 by TMHMM2.0 at aa 4-21%2C 26-48%2C 61-83%2C 90-112%2C160-182%2C 371-393%2C 397-419%2C 431-448%2C 463-485%2C 492-513 and 528-550;gbkey=misc_feature;gene=yidE;inference=protein motif:TMHMM:2.0;part=11/11
AM286415.1	EMBL	sequence_feature	4560456	4560704	.	-	.	ID=id7271;Note=Pfam match to entry PF02080 TrkA-C%2C TrkA-C domain %2Cscore 45.7%2C E-value 6.6e-11;gbkey=misc_feature;gene=yidE;inference=protein motif:PFAM:PF02080
AM286415.1	EMBL	sequence_feature	4560711	4560839	.	-	.	ID=id7272;Note=Pfam match to entry PF02080 TrkA-C%2C TrkA-C domain %2Cscore 23.1%2C E-value 2e-06;gbkey=misc_feature;gene=yidE;inference=protein motif:PFAM:PF02080
AM286415.1	EMBL	gene	4561809	4562282	.	-	.	ID=gene4118;Name=ibpB;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;gene_synonym=hslS,htpE;locus_tag=YE4163
AM286415.1	EMBL	CDS	4561809	4562282	.	-	0	ID=cds4009;Parent=gene4118;Dbxref=EnsemblGenomes-Gn:YE4163,EnsemblGenomes-Tr:CAL14179,InterPro:IPR002068,InterPro:IPR008978,InterPro:IPR022848,UniProtKB/TrEMBL:A1JT68,NCBI_GP:CAL14179.1;Name=CAL14179.1;gbkey=CDS;gene=ibpB;product=heat shock protein;protein_id=CAL14179.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4561878	4562198	.	-	.	ID=id7273;Note=Pfam match to entry PF00011 HSP20%2C Hsp20/alpha crystallin family%2C score 76.6%2C E-value 3.3e-20;gbkey=misc_feature;gene=ibpB;inference=protein motif:PFAM:PF00011
AM286415.1	EMBL	gene	4562407	4562820	.	-	.	ID=gene4119;Name=ibpA;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;gene_synonym=hslT,htpN;locus_tag=YE4164
AM286415.1	EMBL	CDS	4562407	4562820	.	-	0	ID=cds4010;Parent=gene4119;Dbxref=EnsemblGenomes-Gn:YE4164,EnsemblGenomes-Tr:CAL14180,InterPro:IPR002068,InterPro:IPR008978,UniProtKB/TrEMBL:A1JT69,NCBI_GP:CAL14180.1;Name=CAL14180.1;gbkey=CDS;gene=ibpA;product=heat shock protein;protein_id=CAL14180.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4562410	4562730	.	-	.	ID=id7274;Note=Pfam match to entry PF00011 HSP20%2C Hsp20/alpha crystallin family%2C score 89.3%2C E-value 4.9e-24;gbkey=misc_feature;gene=ibpA;inference=protein motif:PFAM:PF00011
AM286415.1	EMBL	gene	4563203	4563541	.	+	.	ID=gene4120;Name=YE4165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4165
AM286415.1	EMBL	CDS	4563203	4563541	.	+	0	ID=cds4011;Parent=gene4120;Dbxref=EnsemblGenomes-Gn:YE4165,EnsemblGenomes-Tr:CAL14181,InterPro:IPR010780,UniProtKB/TrEMBL:A1JT70,NCBI_GP:CAL14181.1;Name=CAL14181.1;gbkey=CDS;product=putative lipoprotein;protein_id=CAL14181.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4563230	4563262	.	+	.	ID=id7275;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4563543	4564844	.	-	.	ID=gene4121;Name=YE4166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4166
AM286415.1	EMBL	CDS	4563543	4564844	.	-	0	ID=cds4012;Parent=gene4121;Dbxref=EnsemblGenomes-Gn:YE4166,EnsemblGenomes-Tr:CAL14182,InterPro:IPR011042,InterPro:IPR011659,InterPro:IPR022223,UniProtKB/TrEMBL:A1JT72,NCBI_GP:CAL14182.1;Name=CAL14182.1;Note=Similar to Salmonella typhi putative ATP/GTP-binding protein sty3967 SWALL:Q8Z2M0 (EMBL:AL627280) (408 aa) fasta scores: E(): 4.9e-41%2C62.14 38d in 420 aa%2C and to Escherichia coli hypothetical protein YidR yidR or b3689 SWALL:YIDR_ECOLI (SWALL:P31455) (416 aa) fasta scores: E(): 5.4e-38%2C 62.65 38d in 407 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P31455;product=conserved hypothetical protein;protein_id=CAL14182.1;transl_table=11
AM286415.1	EMBL	gene	4564986	4565945	.	+	.	ID=gene4122;Name=YE4167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4167
AM286415.1	EMBL	CDS	4564986	4565945	.	+	0	ID=cds4013;Parent=gene4122;Dbxref=EnsemblGenomes-Gn:YE4167,EnsemblGenomes-Tr:CAL14183,GOA:A1JT73,InterPro:IPR000634,InterPro:IPR001926,UniProtKB/TrEMBL:A1JT73,NCBI_GP:CAL14183.1;Name=CAL14183.1;gbkey=CDS;product=pyridoxal-phosphate dependent enzyme;protein_id=CAL14183.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4565028	4565903	.	+	.	ID=id7276;Note=Pfam match to entry PF00291 PALP%2CPyridoxal-phosphate dependent enzyme%2C score 242.3%2CE-value 4.3e-70;gbkey=misc_feature;inference=protein motif:PFAM:PF00291
AM286415.1	EMBL	sequence_feature	4565112	4565153	.	+	.	ID=id7277;Note=PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00165
AM286415.1	EMBL	gene	4565942	4566880	.	+	.	ID=gene4123;Name=YE4168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4168
AM286415.1	EMBL	CDS	4565942	4566880	.	+	0	ID=cds4014;Parent=gene4123;Dbxref=EnsemblGenomes-Gn:YE4168,EnsemblGenomes-Tr:CAL14184,InterPro:IPR003462,InterPro:IPR016040,InterPro:IPR023401,UniProtKB/TrEMBL:A1JT74,NCBI_GP:CAL14184.1;Name=CAL14184.1;gbkey=CDS;product=putative ornithine cyclodeaminase;protein_id=CAL14184.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4565942	4566877	.	+	.	ID=id7278;Note=Pfam match to entry PF02423 ODC_Mu_crystall%2COrnithine cyclodeaminase/mu-crystallin family%2C score 153.9%2C E-value 1.8e-43;gbkey=misc_feature;inference=protein motif:PFAM:PF02423
AM286415.1	EMBL	gene	4567039	4567848	.	-	.	ID=gene4124;Name=YE4169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4169
AM286415.1	EMBL	CDS	4567039	4567848	.	-	0	ID=cds4015;Parent=gene4124;Dbxref=EnsemblGenomes-Gn:YE4169,EnsemblGenomes-Tr:CAL14185,GOA:A1JT75,InterPro:IPR000150,InterPro:IPR006379,InterPro:IPR023214,UniProtKB/TrEMBL:A1JT75,NCBI_GP:CAL14185.1;Name=CAL14185.1;gbkey=CDS;product=putative haloacid dehalogenase-like hydrolase;protein_id=CAL14185.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4567126	4567842	.	-	.	ID=id7279;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 29.5%2C E-value 5.1e-06;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	sequence_feature	4567801	4567836	.	-	.	ID=id7280;Note=PS01228 Hypothetical cof family signature 1.;gbkey=misc_feature;inference=protein motif:Prosite:PS01228
AM286415.1	EMBL	gene	4568018	4570432	.	-	.	ID=gene4125;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;gene_synonym=acrB,himB,hisU,nalC,parA,pcbA;locus_tag=YE4170
AM286415.1	EMBL	CDS	4568018	4570432	.	-	0	ID=cds4016;Parent=gene4125;Dbxref=EnsemblGenomes-Gn:YE4170,EnsemblGenomes-Tr:CAL14186,GOA:A1JT76,InterPro:IPR001241,InterPro:IPR002288,InterPro:IPR003594,InterPro:IPR006171,InterPro:IPR011557,InterPro:IPR013506,InterPro:IPR013759,InterPro:IPR013760,InterPro:IPR014721,InterPro:IPR018522,InterPro:IPR020568,UniProtKB/TrEMBL:A1JT76,NCBI_GP:CAL14186.1;Name=CAL14186.1;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=CAL14186.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4568054	4568254	.	-	.	ID=id7281;Note=Pfam match to entry PF00986 DNA_gyraseB_C%2C DNA gyrase B subunit%2C carboxyl terminus%2C score 160.1%2C E-value 2.5e-45;gbkey=misc_feature;gene=gyrB;inference=protein motif:PFAM:PF00986
AM286415.1	EMBL	sequence_feature	4568858	4569181	.	-	.	ID=id7282;Note=Pfam match to entry PF01751 Toprim%2C Toprim domain %2Cscore 30.9%2C E-value 2e-06;gbkey=misc_feature;gene=gyrB;inference=protein motif:PFAM:PF01751
AM286415.1	EMBL	sequence_feature	4569143	4569169	.	-	.	ID=id7283;Note=PS00177 DNA topoisomerase II signature.;gbkey=misc_feature;gene=gyrB;inference=protein motif:Prosite:PS00177
AM286415.1	EMBL	sequence_feature	4569260	4569772	.	-	.	ID=id7284;Note=Pfam match to entry PF00204 DNA_gyraseB%2C DNA gyrase B%2C score 322.5%2C E-value 3.1e-94;gbkey=misc_feature;gene=gyrB;inference=protein motif:PFAM:PF00204
AM286415.1	EMBL	sequence_feature	4569911	4570342	.	-	.	ID=id7285;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 121.8%2C E-value 8.3e-34;gbkey=misc_feature;gene=gyrB;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	4570452	4571537	.	-	.	ID=gene4126;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;gene_synonym=uvrF;locus_tag=YE4171
AM286415.1	EMBL	CDS	4570452	4571537	.	-	0	ID=cds4017;Parent=gene4126;Dbxref=EnsemblGenomes-Gn:YE4171,EnsemblGenomes-Tr:CAL14187,GOA:A1JT78,InterPro:IPR001238,InterPro:IPR003395,InterPro:IPR018078,InterPro:IPR027417,NCBI_GP:CAL14187.1;Name=CAL14187.1;gbkey=CDS;gene=recF;product=DNA metabolism protein;protein_id=CAL14187.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4570563	4571537	.	-	.	ID=id7286;Note=Pfam match to entry PF02463 SMC_N%2C RecF/RecN/SMC N terminal domain%2C score 465.3%2C E-value 3.3e-137;gbkey=misc_feature;gene=recF;inference=protein motif:PFAM:PF02463
AM286415.1	EMBL	sequence_feature	4570590	4570643	.	-	.	ID=id7287;Note=PS00618 RecF protein signature 2.;gbkey=misc_feature;gene=recF;inference=protein motif:Prosite:PS00618
AM286415.1	EMBL	sequence_feature	4571127	4571204	.	-	.	ID=id7288;Note=PS00617 RecF protein signature 1.;gbkey=misc_feature;gene=recF;inference=protein motif:Prosite:PS00617
AM286415.1	EMBL	sequence_feature	4571427	4571450	.	-	.	ID=id7289;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=recF;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4571700	4572800	.	-	.	ID=gene4127;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=YE4172
AM286415.1	EMBL	CDS	4571700	4572800	.	-	0	ID=cds4018;Parent=gene4127;Dbxref=EnsemblGenomes-Gn:YE4172,EnsemblGenomes-Tr:CAL14188,GOA:A1JT79,InterPro:IPR001001,InterPro:IPR022634,InterPro:IPR022635,InterPro:IPR022637,UniProtKB/TrEMBL:A1JT79,NCBI_GP:CAL14188.1;Name=CAL14188.1;gbkey=CDS;gene=dnaN;product=DNA polymerase III%2C beta subunit protein;protein_id=CAL14188.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4571706	4572068	.	-	.	ID=id7290;Note=Pfam match to entry PF02768 DNA_pol3_beta_3%2C DNA polymerase III beta subunit%2C C-terminal domain%2C score 208.8%2C E-value 5.3e-60;gbkey=misc_feature;gene=dnaN;inference=protein motif:PFAM:PF02768
AM286415.1	EMBL	sequence_feature	4572072	4572416	.	-	.	ID=id7291;Note=Pfam match to entry PF02767 DNA_pol3_beta_2%2C DNA polymerase III beta subunit%2C central domain%2C score 227.9%2CE-value 9.7e-66;gbkey=misc_feature;gene=dnaN;inference=protein motif:PFAM:PF02767
AM286415.1	EMBL	sequence_feature	4572441	4572800	.	-	.	ID=id7292;Note=Pfam match to entry PF00712 DNA_pol3_beta%2C DNA polymerase III beta subunit%2C N-terminal domain%2C score 215.3%2C E-value 6e-62;gbkey=misc_feature;gene=dnaN;inference=protein motif:PFAM:PF00712
AM286415.1	EMBL	gene	4572805	4574193	.	-	.	ID=gene4128;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=YE4173
AM286415.1	EMBL	CDS	4572805	4574193	.	-	0	ID=cds4019;Parent=gene4128;Dbxref=EnsemblGenomes-Gn:YE4173,EnsemblGenomes-Tr:CAL14189,GOA:A1JT80,InterPro:IPR001957,InterPro:IPR003593,InterPro:IPR010921,InterPro:IPR013159,InterPro:IPR013317,InterPro:IPR018312,InterPro:IPR020591,InterPro:IPR024633,InterPro:IPR027417,NCBI_GP:CAL14189.1;Name=CAL14189.1;gbkey=CDS;gene=dnaA;product=chromosomal replication initiator protein;protein_id=CAL14189.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4572877	4573815	.	-	.	ID=id7293;Note=Pfam match to entry PF00308 bac_dnaA%2C Bacterial dnaA protein%2C score 735.6%2C E-value 1.4e-218;gbkey=misc_feature;gene=dnaA;inference=protein motif:PFAM:PF00308
AM286415.1	EMBL	sequence_feature	4572877	4572936	.	-	.	ID=id7294;Note=PS01008 DnaA protein signature.;gbkey=misc_feature;gene=dnaA;inference=protein motif:Prosite:PS01008
AM286415.1	EMBL	sequence_feature	4573672	4573695	.	-	.	ID=id7295;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=dnaA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4574542	4574862	.	+	.	ID=gene4129;Name=YE4174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4174
AM286415.1	EMBL	CDS	4574542	4574862	.	+	0	ID=cds4020;Parent=gene4129;Dbxref=EnsemblGenomes-Gn:YE4174,EnsemblGenomes-Tr:CAL14190,UniProtKB/TrEMBL:A1JT82,NCBI_GP:CAL14190.1;Name=CAL14190.1;Note=Possible CDS. No significant database hits;gbkey=CDS;product=Hypothetical protein;protein_id=CAL14190.1;transl_table=11
AM286415.1	EMBL	gene	4574898	4575038	.	+	.	ID=gene4130;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;gene_synonym=rimA,ssaF;locus_tag=YE4175
AM286415.1	EMBL	CDS	4574898	4575038	.	+	0	ID=cds4021;Parent=gene4130;Dbxref=EnsemblGenomes-Gn:YE4175,EnsemblGenomes-Tr:CAL14191,GOA:A1JT83,InterPro:IPR000271,InterPro:IPR020939,NCBI_GP:CAL14191.1;Name=CAL14191.1;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=CAL14191.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4574898	4575029	.	+	.	ID=id7296;Note=Pfam match to entry PF00468 Ribosomal_L34%2CRibosomal protein L34%2C score 81.1%2C E-value 1.5e-21;gbkey=misc_feature;gene=rpmH;inference=protein motif:PFAM:PF00468
AM286415.1	EMBL	sequence_feature	4574901	4574960	.	+	.	ID=id7297;Note=PS00784 Ribosomal protein L34 signature.;gbkey=misc_feature;gene=rpmH;inference=protein motif:Prosite:PS00784
AM286415.1	EMBL	gene	4575057	4575416	.	+	.	ID=gene4131;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=YE4176
AM286415.1	EMBL	CDS	4575057	4575416	.	+	0	ID=cds4022;Parent=gene4131;Dbxref=EnsemblGenomes-Gn:YE4176,EnsemblGenomes-Tr:CAL14192,GOA:A1JT84,InterPro:IPR000100,InterPro:IPR014721,InterPro:IPR020539,InterPro:IPR020568,NCBI_GP:CAL14192.1;Name=CAL14192.1;gbkey=CDS;gene=rnpA;product=ribonuclease P protein;protein_id=CAL14192.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4575072	4575395	.	+	.	ID=id7298;Note=Pfam match to entry PF00825 Ribonuclease_P%2CRibonuclease P%2C score 203.5%2C E-value 2.1e-58;gbkey=misc_feature;gene=rnpA;inference=protein motif:PFAM:PF00825
AM286415.1	EMBL	sequence_feature	4575222	4575266	.	+	.	ID=id7299;Note=PS00648 Bacterial ribonuclease P protein component signature.;gbkey=misc_feature;gene=rnpA;inference=protein motif:Prosite:PS00648
AM286415.1	EMBL	gene	4575640	4577286	.	+	.	ID=gene4132;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=YE4177
AM286415.1	EMBL	CDS	4575640	4577286	.	+	0	ID=cds4023;Parent=gene4132;Dbxref=EnsemblGenomes-Gn:YE4177,EnsemblGenomes-Tr:CAL14193,GOA:A1JT86,InterPro:IPR001708,InterPro:IPR019998,InterPro:IPR028053,InterPro:IPR028055,UniProtKB/TrEMBL:A1JT86,NCBI_GP:CAL14193.1;Name=CAL14193.1;gbkey=CDS;gene=yidC;product=probable membrane protein;protein_id=CAL14193.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4575658	4575711	.	+	.	ID=id7300;Note=5 probable transmembrane helices predicted for YE4177 by TMHMM2.0 at aa 7-24%2C 349-371%2C 417-439%2C 459-476 and 496-518;gbkey=misc_feature;gene=yidC;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4576684	4576752	.	+	.	ID=id7300;Note=5 probable transmembrane helices predicted for YE4177 by TMHMM2.0 at aa 7-24%2C 349-371%2C 417-439%2C 459-476 and 496-518;gbkey=misc_feature;gene=yidC;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4576888	4576956	.	+	.	ID=id7300;Note=5 probable transmembrane helices predicted for YE4177 by TMHMM2.0 at aa 7-24%2C 349-371%2C 417-439%2C 459-476 and 496-518;gbkey=misc_feature;gene=yidC;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4577014	4577067	.	+	.	ID=id7300;Note=5 probable transmembrane helices predicted for YE4177 by TMHMM2.0 at aa 7-24%2C 349-371%2C 417-439%2C 459-476 and 496-518;gbkey=misc_feature;gene=yidC;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4577125	4577193	.	+	.	ID=id7300;Note=5 probable transmembrane helices predicted for YE4177 by TMHMM2.0 at aa 7-24%2C 349-371%2C 417-439%2C 459-476 and 496-518;gbkey=misc_feature;gene=yidC;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	4576291	4576308	.	+	.	ID=id7301;Note=PS00496 P-II protein urydylation site.;gbkey=misc_feature;gene=yidC;inference=protein motif:Prosite:PS00496
AM286415.1	EMBL	sequence_feature	4576690	4577244	.	+	.	ID=id7302;Note=Pfam match to entry PF02096 60KD_IMP%2C 60Kd inner membrane protein%2C score 413.3%2C E-value 1.5e-121;gbkey=misc_feature;gene=yidC;inference=protein motif:PFAM:PF02096
AM286415.1	EMBL	gene	4577454	4578818	.	+	.	ID=gene4133;Name=thdF;gbkey=Gene;gene=thdF;gene_biotype=protein_coding;gene_synonym=trmE;locus_tag=YE4178
AM286415.1	EMBL	CDS	4577454	4578818	.	+	0	ID=cds4024;Parent=gene4133;Dbxref=EnsemblGenomes-Gn:YE4178,EnsemblGenomes-Tr:CAL14194,GOA:A1JT87,InterPro:IPR004520,InterPro:IPR005225,InterPro:IPR006073,InterPro:IPR018948,InterPro:IPR025867,InterPro:IPR027266,InterPro:IPR027368,InterPro:IPR027417,NCBI_GP:CAL14194.1;Name=CAL14194.1;gbkey=CDS;gene=thdF;product=putative thiophene and furan oxidation protein;protein_id=CAL14194.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4577718	4578566	.	+	.	ID=id7303;Note=Pfam match to entry PF01926 MMR_HSR1%2C GTPase of unknown function%2C score -11.6%2C E-value 6.3e-07;gbkey=misc_feature;gene=thdF;inference=protein motif:PFAM:PF01926
AM286415.1	EMBL	sequence_feature	4578120	4578143	.	+	.	ID=id7304;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=thdF;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4578927	4580126	.	+	.	ID=gene4134;Name=YE4179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4179
AM286415.1	EMBL	CDS	4578927	4580126	.	+	0	ID=cds4025;Parent=gene4134;Dbxref=EnsemblGenomes-Gn:YE4179,EnsemblGenomes-Tr:CAL14195,GOA:A1JT88,InterPro:IPR010758,InterPro:IPR024906,InterPro:IPR024910,NCBI_GP:CAL14195.1;Name=CAL14195.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL14195.1;transl_table=11
AM286415.1	EMBL	gene	4580352	4581167	.	+	.	ID=gene4135;Name=YE4180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4180
AM286415.1	EMBL	CDS	4580352	4581167	.	+	0	ID=cds4026;Parent=gene4135;Dbxref=EnsemblGenomes-Gn:YE4180,EnsemblGenomes-Tr:CAL14196,InterPro:IPR004872,UniProtKB/TrEMBL:A1JT89,NCBI_GP:CAL14196.1;Name=CAL14196.1;Note=Similar to Neisseria meningitidis outer membrane lipoprotein Gna1946 gna1946 SWALL:Q9JPN5 (EMBL:AF226487) (287 aa) fasta scores: E(): 1.4e-31%2C 40.4 38d in 245 aa%2Cand to Salmonella typhimurium%2C and Salmonella enteritidis putative ABC-type transport system ATPase component/cell division protein sfba or stm0510 SWALL:Q9S4Z1 (EMBL:AE008719) (276 aa) fasta scores: E(): 1.5e-29%2C36.39 38d in 272 aa;gbkey=CDS;inference=similar to sequence:INSDC:AF226487;product=Possible component of an ABC transporter system;protein_id=CAL14196.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4580439	4581158	.	+	.	ID=id7305;Note=Pfam match to entry PF03180 Lipoprotein_9%2C NLPA lipoprotein%2C score 191.3%2C E-value 1e-54;gbkey=misc_feature;inference=protein motif:PFAM:PF03180
AM286415.1	EMBL	gene	4581179	4582195	.	+	.	ID=gene4136;Name=YE4181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4181
AM286415.1	EMBL	CDS	4581179	4582195	.	+	0	ID=cds4027;Parent=gene4136;Dbxref=EnsemblGenomes-Gn:YE4181,EnsemblGenomes-Tr:CAL14197,GOA:A1JT91,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR017871,InterPro:IPR017908,InterPro:IPR018449,InterPro:IPR026253,InterPro:IPR027417,UniProtKB/TrEMBL:A1JT91,NCBI_GP:CAL14197.1;Name=CAL14197.1;Note=Similar to Staphylococcus aureus hypothetical protein sav0462 or sa0420 SWALL:Q99WE1 (EMBL:AP003359) (341 aa) fasta scores: E(): 2.5e-59%2C 53.07 38d in 341 aa%2Cand to SWALL:ABC_ECOLI (SWALL:) (343 aa) fasta scores: E(): 2.9e-50%2C 45.85 38d in 338 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:;product=Putative ABC transport family protein;protein_id=CAL14197.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4581269	4581829	.	+	.	ID=id7306;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 257.6%2C E-value 1.1e-74;gbkey=misc_feature;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4581290	4581313	.	+	.	ID=id7307;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4581599	4581643	.	+	.	ID=id7308;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	gene	4582192	4582857	.	+	.	ID=gene4137;Name=YE4182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4182
AM286415.1	EMBL	CDS	4582192	4582857	.	+	0	ID=cds4028;Parent=gene4137;Dbxref=EnsemblGenomes-Gn:YE4182,EnsemblGenomes-Tr:CAL14198,GOA:A1JT93,InterPro:IPR000515,UniProtKB/TrEMBL:A1JT93,NCBI_GP:CAL14198.1;Name=CAL14198.1;Note=Similar to Staphylococcus aureus hypothetical protein Sav0463 or sa0421 SWALL:Q99WE0 (EMBL:AP003359) (219 aa) fasta scores: E(): 6e-48%2C 66.98 38d in 209 aa%2Cand to SWALL:YAEE_ECOLI (SWALL:) (217 aa) fasta scores: E(): 2.6e-30%2C 45.93 38d in 209 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:;product=Putative ABC transport permease component;protein_id=CAL14198.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4582249	4582317	.	+	.	ID=id7309;Note=5 probable transmembrane helices predicted for YE4182 by TMHMM2.0 at aa 20-42%2C 63-85%2C 89-111%2C 149-171 and 191-213;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4582378	4582446	.	+	.	ID=id7309;Note=5 probable transmembrane helices predicted for YE4182 by TMHMM2.0 at aa 20-42%2C 63-85%2C 89-111%2C 149-171 and 191-213;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4582456	4582524	.	+	.	ID=id7309;Note=5 probable transmembrane helices predicted for YE4182 by TMHMM2.0 at aa 20-42%2C 63-85%2C 89-111%2C 149-171 and 191-213;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4582636	4582704	.	+	.	ID=id7309;Note=5 probable transmembrane helices predicted for YE4182 by TMHMM2.0 at aa 20-42%2C 63-85%2C 89-111%2C 149-171 and 191-213;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4582762	4582830	.	+	.	ID=id7309;Note=5 probable transmembrane helices predicted for YE4182 by TMHMM2.0 at aa 20-42%2C 63-85%2C 89-111%2C 149-171 and 191-213;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	4582531	4582743	.	+	.	ID=id7310;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 56.0%2C E-value 5.4e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	4582534	4582620	.	+	.	ID=id7311;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	4583178	4585136	.	-	.	ID=gene4138;Name=YE4183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4183
AM286415.1	EMBL	CDS	4583178	4585136	.	-	0	ID=cds4029;Parent=gene4138;Dbxref=EnsemblGenomes-Gn:YE4183,EnsemblGenomes-Tr:CAL14199,GOA:A1JT94,InterPro:IPR003660,InterPro:IPR004010,InterPro:IPR004089,InterPro:IPR004090,UniProtKB/TrEMBL:A1JT94,NCBI_GP:CAL14199.1;Name=CAL14199.1;Note=Similar to Ralstonia solanacearum putative methyl-accepting chemotaxis transmembrane protein rsc0606 or rs06104 SWALL:Q8Y1T3 (EMBL:AL646060) (617 aa) fasta scores: E(): 1.4e-56%2C 44.28 38d in 499 aa%2C and to Salmonella typhimurium methyl-accepting chemotaxis protein II tar or chem or stm1919 SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 4e-48%2C 53.37 38d in 326 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P02941;product=Putative methyl-accepting chemotaxis receptor protein;protein_id=CAL14199.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4583181	4583876	.	-	.	ID=id7312;Note=Pfam match to entry PF00015 MCPsignal%2CMethyl-accepting chemotaxis protein (MCP) signaling domain%2C score 319.5%2C E-value 2.6e-93;gbkey=misc_feature;inference=protein motif:PFAM:PF00015
AM286415.1	EMBL	sequence_feature	4583937	4584152	.	-	.	ID=id7313;Note=Pfam match to entry PF00672 HAMP%2C HAMP domain %2Cscore 44.3%2C E-value 1.8e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00672
AM286415.1	EMBL	sequence_feature	4584987	4585055	.	-	.	ID=id7314;Note=2 probable transmembrane helices predicted for YE4183 by TMHMM2.0 at aa 28-50 and 325-347;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4584096	4584164	.	-	.	ID=id7314;Note=2 probable transmembrane helices predicted for YE4183 by TMHMM2.0 at aa 28-50 and 325-347;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	gene	4585342	4585914	.	+	.	ID=gene4139;Name=ssuE;gbkey=Gene;gene=ssuE;gene_biotype=protein_coding;locus_tag=YE4184
AM286415.1	EMBL	CDS	4585342	4585914	.	+	0	ID=cds4030;Parent=gene4139;Dbxref=EnsemblGenomes-Gn:YE4184,EnsemblGenomes-Tr:CAL14200,GOA:A1JT96,InterPro:IPR005025,InterPro:IPR029039,UniProtKB/TrEMBL:A1JT96,NCBI_GP:CAL14200.1;Name=CAL14200.1;gbkey=CDS;gene=ssuE;product=putative NAD(P)H-dependent FMN reductase;protein_id=CAL14200.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4585357	4585866	.	+	.	ID=id7315;Note=Pfam match to entry PF03358 FMN_red%2CNADPH-dependent FMN reductase%2C score 192.9%2C E-value 3.3e-55;gbkey=misc_feature;gene=ssuE;inference=protein motif:PFAM:PF03358
AM286415.1	EMBL	gene	4586022	4587371	.	+	.	ID=gene4140;Name=YE4185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4185
AM286415.1	EMBL	CDS	4586022	4587371	.	+	0	ID=cds4031;Parent=gene4140;Dbxref=EnsemblGenomes-Gn:YE4185,EnsemblGenomes-Tr:CAL14201,GOA:A1JT98,InterPro:IPR003594,InterPro:IPR003661,InterPro:IPR004358,InterPro:IPR005467,InterPro:IPR009082,UniProtKB/TrEMBL:A1JT98,NCBI_GP:CAL14201.1;Name=CAL14201.1;Note=Similar to Rhizobium loti two-component c4-dicarboxylate transport system%2C sensor protein mlr7238 SWALL:Q986R7 (EMBL:AP003011) (601 aa) fasta scores: E(): 4.4e-21%2C 34.82 38d in 224 aa%2C and to Rhizobium meliloti sensor protein fixl fixl or ra0670 or sma1229 SWALL:FIXL_RHIME (SWALL:P10955) (505 aa) fasta scores: E(): 4.8e-17%2C 31.48 38d in 235 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P10955;product=Probable two-component sensor kinase;protein_id=CAL14201.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4586034	4586093	.	+	.	ID=id7316;Note=2 probable transmembrane helices predicted for YE4185 by TMHMM2.0 at aa 5-24 and 175-197;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4586544	4586612	.	+	.	ID=id7316;Note=2 probable transmembrane helices predicted for YE4185 by TMHMM2.0 at aa 5-24 and 175-197;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	4586682	4586885	.	+	.	ID=id7317;Note=Pfam match to entry PF00512 HisKA%2C His Kinase A (phosphoacceptor) domain%2C score 36.6%2C E-value 3.7e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00512
AM286415.1	EMBL	sequence_feature	4587009	4587332	.	+	.	ID=id7318;Note=Pfam match to entry PF02518 HATPase_c%2C Histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%2C score 120.7%2C E-value 1.8e-33;gbkey=misc_feature;inference=protein motif:PFAM:PF02518
AM286415.1	EMBL	gene	4587397	4587948	.	+	.	ID=gene4141;Name=YE4186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4186
AM286415.1	EMBL	CDS	4587397	4587948	.	+	0	ID=cds4032;Parent=gene4141;Dbxref=EnsemblGenomes-Gn:YE4186,EnsemblGenomes-Tr:CAL14202,GOA:A1JTA0,InterPro:IPR000792,InterPro:IPR001789,InterPro:IPR011006,InterPro:IPR011991,UniProtKB/TrEMBL:A1JTA0,NCBI_GP:CAL14202.1;Name=CAL14202.1;Note=Similar to Agrobacterium tumefaciens two component response regulator nwsb or atu1116 or agr_c_2066 SWALL:Q8UGC2 (EMBL:AE009075) (202 aa) fasta scores: E(): 2.7e-22%2C 42.1 38d in 171 aa%2C and to Bradyrhizobium japonicum transcriptional regulatory protein FixJ fixJ SWALL:FIXJ_BRAJA (SWALL:P23221) (205 aa) fasta scores: E(): 2.7e-19%2C 37.14 38d in 175 aa%3B Potential regulatory partner to YE4185 sensor kinase;gbkey=CDS;inference=similar to sequence:UniProtKB:P23221;product=Probable two-component response regulator;protein_id=CAL14202.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4587397	4587711	.	+	.	ID=id7319;Note=Pfam match to entry PF00072 response_reg%2C Response regulator receiver domain%2C score 72.0%2C E-value 8e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00072
AM286415.1	EMBL	sequence_feature	4587757	4587945	.	+	.	ID=id7320;Note=Pfam match to entry PF00196 GerE%2C Bacterial regulatory proteins%2C luxR family%2C score 72.8%2C E-value 4.7e-19;gbkey=misc_feature;inference=protein motif:PFAM:PF00196
AM286415.1	EMBL	sequence_feature	4587808	4587891	.	+	.	ID=id7321;Note=PS00622 Bacterial regulatory proteins%2C luxR family signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS00622
AM286415.1	EMBL	gene	4588307	4588798	.	+	.	ID=gene4142;Name=YE4187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4187
AM286415.1	EMBL	CDS	4588307	4588798	.	+	0	ID=cds4033;Parent=gene4142;Dbxref=EnsemblGenomes-Gn:YE4187,EnsemblGenomes-Tr:CAL14203,InterPro:IPR005624,UniProtKB/TrEMBL:A1JTA2,NCBI_GP:CAL14203.1;Name=CAL14203.1;Note=Similar to Agrobacterium tumefaciens hypothetical protein atu1117 or agr_c_2067 SWALL:Q8UGC1 (EMBL:AE009075) (160 aa) fasta scores: E(): 2.7e-15%2C 40.12 38d in 162 aa;gbkey=CDS;inference=similar to sequence:INSDC:AE009075;product=Hypothetical exported protein;protein_id=CAL14203.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4588385	4588780	.	+	.	ID=id7322;Note=Pfam match to entry PF03928 DUF336%2C Domain of unknown function (DUF336)%2C score 75.3%2C E-value 8.4e-20;gbkey=misc_feature;inference=protein motif:PFAM:PF03928
AM286415.1	EMBL	gene	4588884	4590212	.	-	.	ID=gene4143;Name=yieG;gbkey=Gene;gene=yieG;gene_biotype=protein_coding;locus_tag=YE4188
AM286415.1	EMBL	CDS	4588884	4590212	.	-	0	ID=cds4034;Parent=gene4143;Dbxref=EnsemblGenomes-Gn:YE4188,EnsemblGenomes-Tr:CAL14204,GOA:A1JTA3,InterPro:IPR006043,InterPro:IPR026033,UniProtKB/TrEMBL:A1JTA3,NCBI_GP:CAL14204.1;Name=CAL14204.1;gbkey=CDS;gene=yieG;product=Xanthine/uracil permeases family protein;protein_id=CAL14204.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4590057	4590125	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=1/13
AM286415.1	EMBL	sequence_feature	4589976	4590044	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=2/13
AM286415.1	EMBL	sequence_feature	4589895	4589963	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=3/13
AM286415.1	EMBL	sequence_feature	4589814	4589882	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=4/13
AM286415.1	EMBL	sequence_feature	4589736	4589795	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=5/13
AM286415.1	EMBL	sequence_feature	4589625	4589693	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=6/13
AM286415.1	EMBL	sequence_feature	4589553	4589606	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=7/13
AM286415.1	EMBL	sequence_feature	4589394	4589462	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=8/13
AM286415.1	EMBL	sequence_feature	4589268	4589336	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=9/13
AM286415.1	EMBL	sequence_feature	4589172	4589240	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=10/13
AM286415.1	EMBL	sequence_feature	4589091	4589159	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=11/13
AM286415.1	EMBL	sequence_feature	4588980	4589048	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=12/13
AM286415.1	EMBL	sequence_feature	4588893	4588946	.	-	.	ID=id7323;Note=13 probable transmembrane helices predicted for YE4188 by TMHMM2.0 at aa 30-52%2C 57-79%2C 84-106%2C 111-133%2C140-159%2C 174-196%2C 203-220%2C 251-273%2C 293-315%2C 325-347%2C352-374%2C 389-411 and 423-440;gbkey=misc_feature;gene=yieG;inference=protein motif:TMHMM:2.0;part=13/13
AM286415.1	EMBL	sequence_feature	4589001	4590134	.	-	.	ID=id7324;Note=Pfam match to entry PF00860 xan_ur_permease%2CPermease family%2C score 105.1%2C E-value 8.7e-29;gbkey=misc_feature;gene=yieG;inference=protein motif:PFAM:PF00860
AM286415.1	EMBL	gene	4590482	4591150	.	+	.	ID=gene4144;Name=YE4189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4189
AM286415.1	EMBL	CDS	4590482	4591150	.	+	0	ID=cds4035;Parent=gene4144;Dbxref=EnsemblGenomes-Gn:YE4189,EnsemblGenomes-Tr:CAL14205,GOA:A1JTA5,InterPro:IPR006439,InterPro:IPR023198,InterPro:IPR023214,UniProtKB/TrEMBL:A1JTA5,NCBI_GP:CAL14205.1;Name=CAL14205.1;gbkey=CDS;product=putative haloacid dehalogenase-like hydrolase;protein_id=CAL14205.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4590491	4591045	.	+	.	ID=id7325;Note=Pfam match to entry PF00702 Hydrolase%2C haloacid dehalogenase-like hydrolase%2C score 79.2%2C E-value 5.5e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00702
AM286415.1	EMBL	gene	4591147	4591902	.	-	.	ID=gene4145;Name=YE4190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4190
AM286415.1	EMBL	CDS	4591147	4591902	.	-	0	ID=cds4036;Parent=gene4145;Dbxref=EnsemblGenomes-Gn:YE4190,EnsemblGenomes-Tr:CAL14206,GOA:A1JTA6,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JTA6,NCBI_GP:CAL14206.1;Name=CAL14206.1;gbkey=CDS;product=putative amino acid transport system permease;protein_id=CAL14206.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4591756	4591824	.	-	.	ID=id7326;Note=4 probable transmembrane helices predicted for YE4190 by TMHMM2.0 at aa 27-49%2C 56-78%2C 93-115 and 197-219;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	4591669	4591737	.	-	.	ID=id7326;Note=4 probable transmembrane helices predicted for YE4190 by TMHMM2.0 at aa 27-49%2C 56-78%2C 93-115 and 197-219;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	4591558	4591626	.	-	.	ID=id7326;Note=4 probable transmembrane helices predicted for YE4190 by TMHMM2.0 at aa 27-49%2C 56-78%2C 93-115 and 197-219;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	4591246	4591314	.	-	.	ID=id7326;Note=4 probable transmembrane helices predicted for YE4190 by TMHMM2.0 at aa 27-49%2C 56-78%2C 93-115 and 197-219;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	4591324	4591551	.	-	.	ID=id7327;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 64.8%2C E-value 1.2e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	4591462	4591548	.	-	.	ID=id7328;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	4591904	4592641	.	-	.	ID=gene4146;Name=YE4191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4191
AM286415.1	EMBL	CDS	4591904	4592641	.	-	0	ID=cds4037;Parent=gene4146;Dbxref=EnsemblGenomes-Gn:YE4191,EnsemblGenomes-Tr:CAL14207,GOA:A1JTA7,InterPro:IPR000515,InterPro:IPR010065,UniProtKB/TrEMBL:A1JTA7,NCBI_GP:CAL14207.1;Name=CAL14207.1;gbkey=CDS;product=ABC transporter permease;protein_id=CAL14207.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4592504	4592572	.	-	.	ID=id7329;Note=4 probable transmembrane helices predicted for YE4191 by TMHMM2.0 at aa 24-46%2C 58-80%2C 100-122 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	4592402	4592470	.	-	.	ID=id7329;Note=4 probable transmembrane helices predicted for YE4191 by TMHMM2.0 at aa 24-46%2C 58-80%2C 100-122 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	4592276	4592344	.	-	.	ID=id7329;Note=4 probable transmembrane helices predicted for YE4191 by TMHMM2.0 at aa 24-46%2C 58-80%2C 100-122 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	4591940	4592008	.	-	.	ID=id7329;Note=4 probable transmembrane helices predicted for YE4191 by TMHMM2.0 at aa 24-46%2C 58-80%2C 100-122 and 212-234;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	4591994	4592236	.	-	.	ID=id7330;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 44.0%2C E-value 2.2e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	4592546	4592578	.	-	.	ID=id7331;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4592871	4593725	.	-	.	ID=gene4147;Name=YE4193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4193
AM286415.1	EMBL	CDS	4592871	4593725	.	-	0	ID=cds4038;Parent=gene4147;Dbxref=EnsemblGenomes-Gn:YE4193,EnsemblGenomes-Tr:CAL14208,GOA:A1JTA8,InterPro:IPR001638,InterPro:IPR018313,UniProtKB/TrEMBL:A1JTA8,NCBI_GP:CAL14208.1;Name=CAL14208.1;gbkey=CDS;product=putative periplasmic solute-binding protein;protein_id=CAL14208.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4592940	4593605	.	-	.	ID=id7332;Note=Pfam match to entry PF00497 SBP_bac_3%2C Bacterial extracellular solute-binding proteins%2C family 3%2C score 243.9%2C E-value 1.4e-70;gbkey=misc_feature;inference=protein motif:PFAM:PF00497
AM286415.1	EMBL	sequence_feature	4593495	4593536	.	-	.	ID=id7333;Note=PS01039 Bacterial extracellular solute-binding proteins%2C family 3 signature.;gbkey=misc_feature;inference=protein motif:Prosite:PS01039
AM286415.1	EMBL	gene	4594015	4595205	.	+	.	ID=gene4148;Name=YE4194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4194
AM286415.1	EMBL	CDS	4594015	4595205	.	+	0	ID=cds4039;Parent=gene4148;Dbxref=EnsemblGenomes-Gn:YE4194,EnsemblGenomes-Tr:CAL14209,GOA:A1JTB0,InterPro:IPR000242,InterPro:IPR000387,InterPro:IPR003546,InterPro:IPR016130,InterPro:IPR029021,UniProtKB/TrEMBL:A1JTB0,NCBI_GP:CAL14209.1;Name=CAL14209.1;Note=No significant database hits to the N-terminal 120 amino acids. Similar to Salmonella typhimurium protein tyrosine phosphatase SptP or stm2878 SWALL:P74873 (EMBL:U63293) (543 aa) fasta scores: E(): 5.1e-17%2C 36.31 id in 201 aa%2C and to Yersinia enterocolitica secreted effector protein-tyrosine phosphatase YopH or yop51 SWALL:YOPH_YEREN (SWALL:P15273) (468 aa) fasta scores: E(): 1.4e-15%2C 34.3 38d in 274 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P15273;product=Possible tyrosine phosphatase;protein_id=CAL14209.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4594432	4595121	.	+	.	ID=id7334;Note=Pfam match to entry PF00102 Y_phosphatase%2CProtein-tyrosine phosphatase%2C score 64.5%2C E-value 1.5e-16;gbkey=misc_feature;inference=protein motif:PFAM:PF00102
AM286415.1	EMBL	sequence_feature	4594942	4594980	.	+	.	ID=id7335;Note=PS00383 Tyrosine specific protein phosphatases active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00383
AM286415.1	EMBL	gene	4595275	4595613	.	+	.	ID=gene4149;Name=YE4195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4195
AM286415.1	EMBL	CDS	4595275	4595613	.	+	0	ID=cds4040;Parent=gene4149;Dbxref=EnsemblGenomes-Gn:YE4195,EnsemblGenomes-Tr:CAL14210,GOA:A1JTB1,UniProtKB/TrEMBL:A1JTB1,NCBI_GP:CAL14210.1;Name=CAL14210.1;Note=No significant database hits;gbkey=CDS;product=Hypothetical protein;protein_id=CAL14210.1;transl_table=11
AM286415.1	EMBL	gene	4595724	4596446	.	-	.	ID=gene4150;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;gene_synonym=nmpA;locus_tag=YE4196
AM286415.1	EMBL	CDS	4595724	4596446	.	-	0	ID=cds4041;Parent=gene4150;Dbxref=EnsemblGenomes-Gn:YE4196,EnsemblGenomes-Tr:CAL14211,GOA:A1JTB2,InterPro:IPR026022,InterPro:IPR028366,UniProtKB/TrEMBL:A1JTB2,NCBI_GP:CAL14211.1;Name=CAL14211.1;gbkey=CDS;gene=phoU;product=putative phosphate transport system protein;protein_id=CAL14211.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4595808	4596065	.	-	.	ID=id7336;Note=Pfam match to entry PF01895 PhoU%2C PhoU family %2Cscore 116.8%2C E-value 2.7e-32;gbkey=misc_feature;gene=phoU;inference=protein motif:PFAM:PF01895
AM286415.1	EMBL	sequence_feature	4596108	4596374	.	-	.	ID=id7337;Note=Pfam match to entry PF01895 PhoU%2C PhoU family %2Cscore 125.2%2C E-value 7.8e-35;gbkey=misc_feature;gene=phoU;inference=protein motif:PFAM:PF01895
AM286415.1	EMBL	gene	4596616	4597392	.	-	.	ID=gene4151;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;gene_synonym=phoT;locus_tag=YE4198
AM286415.1	EMBL	CDS	4596616	4597392	.	-	0	ID=cds4042;Parent=gene4151;Dbxref=EnsemblGenomes-Gn:YE4198,EnsemblGenomes-Tr:CAL14212,GOA:A1JTB4,InterPro:IPR003439,InterPro:IPR003593,InterPro:IPR005670,InterPro:IPR015850,InterPro:IPR017871,InterPro:IPR027417,UniProtKB/TrEMBL:A1JTB4,NCBI_GP:CAL14212.1;Name=CAL14212.1;gbkey=CDS;gene=pstB;product=putative phosphate transport ATP-binding protein;protein_id=CAL14212.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4596706	4597284	.	-	.	ID=id7338;Note=Pfam match to entry PF00005 ABC_tran%2C ABC transporter%2C score 248.5%2C E-value 5.9e-72;gbkey=misc_feature;gene=pstB;inference=protein motif:PFAM:PF00005
AM286415.1	EMBL	sequence_feature	4596886	4596930	.	-	.	ID=id7339;Note=PS00211 ABC transporters family signature.;gbkey=misc_feature;gene=pstB;inference=protein motif:Prosite:PS00211
AM286415.1	EMBL	sequence_feature	4597240	4597263	.	-	.	ID=id7340;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=pstB;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	gene	4597494	4598381	.	-	.	ID=gene4152;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;gene_synonym=phoT;locus_tag=YE4199
AM286415.1	EMBL	CDS	4597494	4598381	.	-	0	ID=cds4043;Parent=gene4152;Dbxref=EnsemblGenomes-Gn:YE4199,EnsemblGenomes-Tr:CAL14213,GOA:A1JTB5,InterPro:IPR000515,InterPro:IPR005672,UniProtKB/TrEMBL:A1JTB5,NCBI_GP:CAL14213.1;Name=CAL14213.1;gbkey=CDS;gene=pstA;product=putative phosphate transport system permease;protein_id=CAL14213.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4598229	4598297	.	-	.	ID=id7341;Note=6 probable transmembrane helices predicted for YE4199 by TMHMM2.0 at aa 29-51%2C 88-110%2C 123-145%2C 150-169%2C201-223 and 268-290;gbkey=misc_feature;gene=pstA;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4598052	4598120	.	-	.	ID=id7341;Note=6 probable transmembrane helices predicted for YE4199 by TMHMM2.0 at aa 29-51%2C 88-110%2C 123-145%2C 150-169%2C201-223 and 268-290;gbkey=misc_feature;gene=pstA;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4597947	4598015	.	-	.	ID=id7341;Note=6 probable transmembrane helices predicted for YE4199 by TMHMM2.0 at aa 29-51%2C 88-110%2C 123-145%2C 150-169%2C201-223 and 268-290;gbkey=misc_feature;gene=pstA;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4597875	4597934	.	-	.	ID=id7341;Note=6 probable transmembrane helices predicted for YE4199 by TMHMM2.0 at aa 29-51%2C 88-110%2C 123-145%2C 150-169%2C201-223 and 268-290;gbkey=misc_feature;gene=pstA;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4597713	4597781	.	-	.	ID=id7341;Note=6 probable transmembrane helices predicted for YE4199 by TMHMM2.0 at aa 29-51%2C 88-110%2C 123-145%2C 150-169%2C201-223 and 268-290;gbkey=misc_feature;gene=pstA;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4597512	4597580	.	-	.	ID=id7341;Note=6 probable transmembrane helices predicted for YE4199 by TMHMM2.0 at aa 29-51%2C 88-110%2C 123-145%2C 150-169%2C201-223 and 268-290;gbkey=misc_feature;gene=pstA;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	4597629	4597859	.	-	.	ID=id7342;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 71.9%2C E-value 8.6e-19;gbkey=misc_feature;gene=pstA;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	4597770	4597856	.	-	.	ID=id7343;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=pstA;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	4598220	4598381	.	-	.	ID=gene4153;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=other;locus_tag=YE4199
AM286415.1	EMBL	gene	4598383	4599339	.	-	.	ID=gene4154;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;gene_synonym=phoW;locus_tag=YE4200
AM286415.1	EMBL	CDS	4598383	4599339	.	-	0	ID=cds4044;Parent=gene4154;Dbxref=EnsemblGenomes-Gn:YE4200,EnsemblGenomes-Tr:CAL14214,GOA:A1JTB6,InterPro:IPR000515,InterPro:IPR011864,UniProtKB/TrEMBL:A1JTB6,NCBI_GP:CAL14214.1;Name=CAL14214.1;gbkey=CDS;gene=pstC;product=putative phosphate transport system permease;protein_id=CAL14214.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4599211	4599279	.	-	.	ID=id7344;Note=6 probable transmembrane helices predicted for YE4200 by TMHMM2.0 at aa 21-43%2C 78-100%2C 112-134%2C 166-188%2C227-249 and 291-313;gbkey=misc_feature;gene=pstC;inference=protein motif:TMHMM:2.0;part=1/6
AM286415.1	EMBL	sequence_feature	4599040	4599108	.	-	.	ID=id7344;Note=6 probable transmembrane helices predicted for YE4200 by TMHMM2.0 at aa 21-43%2C 78-100%2C 112-134%2C 166-188%2C227-249 and 291-313;gbkey=misc_feature;gene=pstC;inference=protein motif:TMHMM:2.0;part=2/6
AM286415.1	EMBL	sequence_feature	4598938	4599006	.	-	.	ID=id7344;Note=6 probable transmembrane helices predicted for YE4200 by TMHMM2.0 at aa 21-43%2C 78-100%2C 112-134%2C 166-188%2C227-249 and 291-313;gbkey=misc_feature;gene=pstC;inference=protein motif:TMHMM:2.0;part=3/6
AM286415.1	EMBL	sequence_feature	4598776	4598844	.	-	.	ID=id7344;Note=6 probable transmembrane helices predicted for YE4200 by TMHMM2.0 at aa 21-43%2C 78-100%2C 112-134%2C 166-188%2C227-249 and 291-313;gbkey=misc_feature;gene=pstC;inference=protein motif:TMHMM:2.0;part=4/6
AM286415.1	EMBL	sequence_feature	4598593	4598661	.	-	.	ID=id7344;Note=6 probable transmembrane helices predicted for YE4200 by TMHMM2.0 at aa 21-43%2C 78-100%2C 112-134%2C 166-188%2C227-249 and 291-313;gbkey=misc_feature;gene=pstC;inference=protein motif:TMHMM:2.0;part=5/6
AM286415.1	EMBL	sequence_feature	4598401	4598469	.	-	.	ID=id7344;Note=6 probable transmembrane helices predicted for YE4200 by TMHMM2.0 at aa 21-43%2C 78-100%2C 112-134%2C 166-188%2C227-249 and 291-313;gbkey=misc_feature;gene=pstC;inference=protein motif:TMHMM:2.0;part=6/6
AM286415.1	EMBL	sequence_feature	4598533	4598766	.	-	.	ID=id7345;Note=Pfam match to entry PF00528 BPD_transp%2CBinding-protein-dependent transport systems inner membrane component%2C score 39.3%2C E-value 5.5e-09;gbkey=misc_feature;gene=pstC;inference=protein motif:PFAM:PF00528
AM286415.1	EMBL	sequence_feature	4598677	4598763	.	-	.	ID=id7346;Note=PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.;gbkey=misc_feature;gene=pstC;inference=protein motif:Prosite:PS00402
AM286415.1	EMBL	gene	4599524	4600564	.	-	.	ID=gene4155;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;gene_synonym=phoS;locus_tag=YE4201
AM286415.1	EMBL	CDS	4599524	4600564	.	-	0	ID=cds4045;Parent=gene4155;Dbxref=EnsemblGenomes-Gn:YE4201,EnsemblGenomes-Tr:CAL14215,GOA:A1JTB8,InterPro:IPR005673,InterPro:IPR024370,UniProtKB/TrEMBL:A1JTB8,NCBI_GP:CAL14215.1;Name=CAL14215.1;gbkey=CDS;gene=pstS;product=putative phosphate-binding periplasmic protein;protein_id=CAL14215.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4599578	4600489	.	-	.	ID=id7347;Note=Pfam match to entry PF01449 PstS%2C Phosphate-binding protein%2C score 485.4%2C E-value 2.9e-143;gbkey=misc_feature;gene=pstS;inference=protein motif:PFAM:PF01449
AM286415.1	EMBL	sequence_feature	4600478	4600546	.	-	.	ID=id7348;Note=1 probable transmembrane helix predicted for YE4201 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=pstS;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4600490	4600564	.	-	.	ID=gene4156;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=other;locus_tag=YE4201
AM286415.1	EMBL	gene	4600837	4601199	.	+	.	ID=gene4157;Name=YE4202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YE4202
AM286415.1	EMBL	CDS	4600837	4601199	.	+	0	ID=cds4046;Parent=gene4157;Dbxref=EnsemblGenomes-Gn:YE4202,EnsemblGenomes-Tr:CAL14216,UniProtKB/TrEMBL:A1JTC0,NCBI_GP:CAL14216.1;Name=CAL14216.1;Note=No significant database hits;gbkey=CDS;product=Hypothetical protein;protein_id=CAL14216.1;transl_table=11
AM286415.1	EMBL	gene	4601322	4603151	.	-	.	ID=gene4158;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=YE4203
AM286415.1	EMBL	CDS	4601322	4603151	.	-	0	ID=cds4047;Parent=gene4158;Dbxref=EnsemblGenomes-Gn:YE4203,EnsemblGenomes-Tr:CAL14217,GOA:A1JTC1,InterPro:IPR001347,InterPro:IPR005855,InterPro:IPR017932,InterPro:IPR029055,UniProtKB/TrEMBL:A1JTC1,NCBI_GP:CAL14217.1;Name=CAL14217.1;gbkey=CDS;gene=glmS;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=CAL14217.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4601367	4601777	.	-	.	ID=id7349;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 138.9%2C E-value 5.8e-39;gbkey=misc_feature;gene=glmS;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	sequence_feature	4601886	4602293	.	-	.	ID=id7350;Note=Pfam match to entry PF01380 SIS%2C SIS domain%2C score 162.3%2C E-value 5.4e-46;gbkey=misc_feature;gene=glmS;inference=protein motif:PFAM:PF01380
AM286415.1	EMBL	sequence_feature	4602606	4603148	.	-	.	ID=id7351;Note=Pfam match to entry PF00310 GATase_2%2C Glutamine amidotransferases class-II%2C score 320.8%2C E-value 1e-93;gbkey=misc_feature;gene=glmS;inference=protein motif:PFAM:PF00310
AM286415.1	EMBL	sequence_feature	4603134	4603151	.	-	.	ID=id7352;Note=PS00443 Glutamine amidotransferases class-II active site.;gbkey=misc_feature;gene=glmS;inference=protein motif:Prosite:PS00443
AM286415.1	EMBL	gene	4603358	4604728	.	-	.	ID=gene4159;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=YE4204
AM286415.1	EMBL	CDS	4603358	4604728	.	-	0	ID=cds4048;Parent=gene4159;Dbxref=EnsemblGenomes-Gn:YE4204,EnsemblGenomes-Tr:CAL14218,GOA:A1JTC3,InterPro:IPR001451,InterPro:IPR005882,InterPro:IPR011004,InterPro:IPR018357,InterPro:IPR025877,InterPro:IPR029044,NCBI_GP:CAL14218.1;Name=CAL14218.1;gbkey=CDS;gene=glmU;product=UDP-N-acetylglucosamine pyrophosphorylase;protein_id=CAL14218.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4603436	4603522	.	-	.	ID=id7353;Note=PS00101 Hexapeptide-repeat containing-transferases signature.;gbkey=misc_feature;gene=glmU;inference=protein motif:Prosite:PS00101
AM286415.1	EMBL	sequence_feature	4603442	4603495	.	-	.	ID=id7354;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 8.7%2CE-value 3.7;gbkey=misc_feature;gene=glmU;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	4603496	4603549	.	-	.	ID=id7355;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 8.2%2CE-value 4.3;gbkey=misc_feature;gene=glmU;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	4603571	4603624	.	-	.	ID=id7356;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 9.0%2CE-value 3.4;gbkey=misc_feature;gene=glmU;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	4603673	4603726	.	-	.	ID=id7357;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 8.9%2CE-value 3.5;gbkey=misc_feature;gene=glmU;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	4603778	4603831	.	-	.	ID=id7358;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 16.0%2CE-value 0.06;gbkey=misc_feature;gene=glmU;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	4603847	4603900	.	-	.	ID=id7359;Note=Pfam match to entry PF00132 hexapep%2C Bacterial transferase hexapeptide (four repeats)%2C score 15.3%2CE-value 0.098;gbkey=misc_feature;gene=glmU;inference=protein motif:PFAM:PF00132
AM286415.1	EMBL	sequence_feature	4604030	4604710	.	-	.	ID=id7360;Note=Pfam match to entry PF00483 NTP_transferase%2CNucleotidyl transferase%2C score -24.2%2C E-value 7.9e-07;gbkey=misc_feature;gene=glmU;inference=protein motif:PFAM:PF00483
AM286415.1	EMBL	gene	4605243	4605665	.	-	.	ID=gene4160;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;gene_synonym=papG,uncC;locus_tag=YE4205
AM286415.1	EMBL	CDS	4605243	4605665	.	-	0	ID=cds4049;Parent=gene4160;Dbxref=EnsemblGenomes-Gn:YE4205,EnsemblGenomes-Tr:CAL14219,GOA:A1JTC5,InterPro:IPR001469,InterPro:IPR020546,InterPro:IPR020547,NCBI_GP:CAL14219.1;Name=CAL14219.1;gbkey=CDS;gene=atpC;product=ATP synthase epsilon subunit protein;protein_id=CAL14219.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4605255	4605401	.	-	.	ID=id7361;Note=Pfam match to entry PF00401 ATP-synt_DE%2C ATP synthase%2C Delta/Epsilon chain%2C long alpha-helix domain %2Cscore 49.4%2C E-value 5.3e-12;gbkey=misc_feature;gene=atpC;inference=protein motif:PFAM:PF00401
AM286415.1	EMBL	sequence_feature	4605405	4605653	.	-	.	ID=id7362;Note=Pfam match to entry PF02823 ATP-synt_DE_N%2C ATP synthase%2C Delta/Epsilon chain%2C beta-sandwich domain %2Cscore 124.8%2C E-value 1e-34;gbkey=misc_feature;gene=atpC;inference=protein motif:PFAM:PF02823
AM286415.1	EMBL	gene	4605687	4607069	.	-	.	ID=gene4161;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;gene_synonym=papB,uncD;locus_tag=YE4206
AM286415.1	EMBL	CDS	4605687	4607069	.	-	0	ID=cds4050;Parent=gene4161;Dbxref=EnsemblGenomes-Gn:YE4206,EnsemblGenomes-Tr:CAL14220,GOA:A1JTC6,InterPro:IPR000194,InterPro:IPR000793,InterPro:IPR003593,InterPro:IPR004100,InterPro:IPR005722,InterPro:IPR020003,InterPro:IPR024034,InterPro:IPR027417,NCBI_GP:CAL14220.1;Name=CAL14220.1;gbkey=CDS;gene=atpD;product=ATP synthase beta subunit protein;protein_id=CAL14220.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4605690	4606019	.	-	.	ID=id7363;Note=Pfam match to entry PF00306 ATP-synt_ab_C%2C ATP synthase alpha/beta chain%2C C terminal domain%2C score 184.3%2C E-value 1.2e-52;gbkey=misc_feature;gene=atpD;inference=protein motif:PFAM:PF00306
AM286415.1	EMBL	sequence_feature	4606026	4606844	.	-	.	ID=id7364;Note=Pfam match to entry PF00006 ATP-synt_ab%2C ATP synthase alpha/beta family%2C nucleotide-binding domain %2Cscore 452.6%2C E-value 2.2e-133;gbkey=misc_feature;gene=atpD;inference=protein motif:PFAM:PF00006
AM286415.1	EMBL	sequence_feature	4606044	4606073	.	-	.	ID=id7365;Note=PS00152 ATP synthase alpha and beta subunits signature.;gbkey=misc_feature;gene=atpD;inference=protein motif:Prosite:PS00152
AM286415.1	EMBL	sequence_feature	4606599	4606622	.	-	.	ID=id7366;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=atpD;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4606851	4607054	.	-	.	ID=id7367;Note=Pfam match to entry PF02874 ATP-synt_ab_N%2C ATP synthase alpha/beta family%2C beta-barrel domain%2C score 98.6%2C E-value 7.9e-27;gbkey=misc_feature;gene=atpD;inference=protein motif:PFAM:PF02874
AM286415.1	EMBL	gene	4607226	4608089	.	-	.	ID=gene4162;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;gene_synonym=papC,uncG;locus_tag=YE4207
AM286415.1	EMBL	CDS	4607226	4608089	.	-	0	ID=cds4051;Parent=gene4162;Dbxref=EnsemblGenomes-Gn:YE4207,EnsemblGenomes-Tr:CAL14221,GOA:A1JTC7,InterPro:IPR000131,InterPro:IPR023632,InterPro:IPR023633,NCBI_GP:CAL14221.1;Name=CAL14221.1;gbkey=CDS;gene=atpG;product=ATP synthase gamma subunit protein;protein_id=CAL14221.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4607229	4608086	.	-	.	ID=id7368;Note=Pfam match to entry PF00231 ATP-synt%2C ATP synthase%2C score 579.0%2C E-value 1.9e-171;gbkey=misc_feature;gene=atpG;inference=protein motif:PFAM:PF00231
AM286415.1	EMBL	sequence_feature	4607232	4607273	.	-	.	ID=id7369;Note=PS00153 ATP synthase gamma subunit signature.;gbkey=misc_feature;gene=atpG;inference=protein motif:Prosite:PS00153
AM286415.1	EMBL	sequence_feature	4607865	4607999	.	-	.	ID=id7370;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=atpG;inference=protein motif:Prosite:PS00041
AM286415.1	EMBL	gene	4608151	4609692	.	-	.	ID=gene4163;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;gene_synonym=papA,uncA;locus_tag=YE4208
AM286415.1	EMBL	CDS	4608151	4609692	.	-	0	ID=cds4052;Parent=gene4163;Dbxref=EnsemblGenomes-Gn:YE4208,EnsemblGenomes-Tr:CAL14222,GOA:A1JTC8,InterPro:IPR000194,InterPro:IPR000793,InterPro:IPR004100,InterPro:IPR005294,InterPro:IPR020003,InterPro:IPR023366,InterPro:IPR027417,NCBI_GP:CAL14222.1;Name=CAL14222.1;gbkey=CDS;gene=atpA;product=ATP synthase alpha subunit protein;protein_id=CAL14222.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4608178	4608546	.	-	.	ID=id7371;Note=Pfam match to entry PF00306 ATP-synt_ab_C%2C ATP synthase alpha/beta chain%2C C terminal domain%2C score 97.5%2CE-value 1.7e-26;gbkey=misc_feature;gene=atpA;inference=protein motif:PFAM:PF00306
AM286415.1	EMBL	sequence_feature	4608550	4609410	.	-	.	ID=id7372;Note=Pfam match to entry PF00006 ATP-synt_ab%2C ATP synthase alpha/beta family%2C nucleotide-binding domain %2Cscore 527.6%2C E-value 5.8e-156;gbkey=misc_feature;gene=atpA;inference=protein motif:PFAM:PF00006
AM286415.1	EMBL	sequence_feature	4608568	4608597	.	-	.	ID=id7373;Note=PS00152 ATP synthase alpha and beta subunits signature.;gbkey=misc_feature;gene=atpA;inference=protein motif:Prosite:PS00152
AM286415.1	EMBL	sequence_feature	4609165	4609188	.	-	.	ID=id7374;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=atpA;inference=protein motif:Prosite:PS00017
AM286415.1	EMBL	sequence_feature	4609417	4609623	.	-	.	ID=id7375;Note=Pfam match to entry PF02874 ATP-synt_ab_N%2C ATP synthase alpha/beta family%2C beta-barrel domain%2C score 66.5%2C E-value 3.8e-17;gbkey=misc_feature;gene=atpA;inference=protein motif:PFAM:PF02874
AM286415.1	EMBL	gene	4609707	4610240	.	-	.	ID=gene4164;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;gene_synonym=papE,uncH;locus_tag=YE4209
AM286415.1	EMBL	CDS	4609707	4610240	.	-	0	ID=cds4053;Parent=gene4164;Dbxref=EnsemblGenomes-Gn:YE4209,EnsemblGenomes-Tr:CAL14223,GOA:A1JTD0,InterPro:IPR000711,InterPro:IPR020781,InterPro:IPR026015,NCBI_GP:CAL14223.1;Name=CAL14223.1;gbkey=CDS;gene=atpH;product=ATP synthase delta subunit protein;protein_id=CAL14223.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4609716	4610222	.	-	.	ID=id7376;Note=Pfam match to entry PF00213 OSCP%2C ATP synthase delta (OSCP) subunit%2C score 233.6%2C E-value 1.9e-67;gbkey=misc_feature;gene=atpH;inference=protein motif:PFAM:PF00213
AM286415.1	EMBL	sequence_feature	4609773	4609832	.	-	.	ID=id7377;Note=PS00389 ATP synthase delta (OSCP) subunit signature.;gbkey=misc_feature;gene=atpH;inference=protein motif:Prosite:PS00389
AM286415.1	EMBL	gene	4610255	4610725	.	-	.	ID=gene4165;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;gene_synonym=papF,uncF;locus_tag=YE4210
AM286415.1	EMBL	CDS	4610255	4610725	.	-	0	ID=cds4054;Parent=gene4165;Dbxref=EnsemblGenomes-Gn:YE4210,EnsemblGenomes-Tr:CAL14224,GOA:A1JTD1,InterPro:IPR002146,InterPro:IPR005864,InterPro:IPR028987,NCBI_GP:CAL14224.1;Name=CAL14224.1;gbkey=CDS;gene=atpF;product=ATP synthase subunit B protein;protein_id=CAL14224.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4610258	4610710	.	-	.	ID=id7378;Note=Pfam match to entry PF00430 ATP-synt_B%2C ATP synthase B/B' CF(0)%2C score 160.0%2C E-value 2.6e-45;gbkey=misc_feature;gene=atpF;inference=protein motif:PFAM:PF00430
AM286415.1	EMBL	gene	4610633	4610725	.	-	.	ID=gene4166;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=other;locus_tag=YE4210
AM286415.1	EMBL	sequence_feature	4610639	4610707	.	-	.	ID=id7379;Note=1 probable transmembrane helix predicted for YE4210 by TMHMM2.0 at aa 7-29;gbkey=misc_feature;gene=atpF;inference=protein motif:TMHMM:2.0
AM286415.1	EMBL	gene	4610786	4611025	.	-	.	ID=gene4167;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;gene_synonym=papH,uncE;locus_tag=YE4211
AM286415.1	EMBL	CDS	4610786	4611025	.	-	0	ID=cds4055;Parent=gene4167;Dbxref=EnsemblGenomes-Gn:YE4211,EnsemblGenomes-Tr:CAL14225,GOA:A1JTD2,InterPro:IPR000454,InterPro:IPR002379,InterPro:IPR005953,InterPro:IPR020537,NCBI_GP:CAL14225.1;Name=CAL14225.1;gbkey=CDS;gene=atpE;product=ATP synthase subunit C protein;protein_id=CAL14225.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4610795	4611004	.	-	.	ID=id7380;Note=Pfam match to entry PF00137 ATP-synt_C%2C ATP synthase subunit C%2C score 93.4%2C E-value 2.9e-25;gbkey=misc_feature;gene=atpE;inference=protein motif:PFAM:PF00137
AM286415.1	EMBL	sequence_feature	4610930	4610998	.	-	.	ID=id7381;Note=2 probable transmembrane helices predicted for YE4211 by TMHMM2.0 at aa 10-32 and 53-75;gbkey=misc_feature;gene=atpE;inference=protein motif:TMHMM:2.0;part=1/2
AM286415.1	EMBL	sequence_feature	4610801	4610869	.	-	.	ID=id7381;Note=2 probable transmembrane helices predicted for YE4211 by TMHMM2.0 at aa 10-32 and 53-75;gbkey=misc_feature;gene=atpE;inference=protein motif:TMHMM:2.0;part=2/2
AM286415.1	EMBL	sequence_feature	4610843	4610908	.	-	.	ID=id7382;Note=PS00605 ATP synthase c subunit signature.;gbkey=misc_feature;gene=atpE;inference=protein motif:Prosite:PS00605
AM286415.1	EMBL	gene	4610957	4611025	.	-	.	ID=gene4168;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=other;locus_tag=YE4211
AM286415.1	EMBL	gene	4611200	4612024	.	-	.	ID=gene4169;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;gene_synonym=papD,uncB;locus_tag=YE4212
AM286415.1	EMBL	CDS	4611200	4612024	.	-	0	ID=cds4056;Parent=gene4169;Dbxref=EnsemblGenomes-Gn:YE4212,EnsemblGenomes-Tr:CAL14226,GOA:A1JTD4,InterPro:IPR000568,InterPro:IPR023011,NCBI_GP:CAL14226.1;Name=CAL14226.1;gbkey=CDS;gene=atpB;product=ATP synthase subunit B protein;protein_id=CAL14226.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4611218	4611724	.	-	.	ID=id7383;Note=Pfam match to entry PF00119 ATP-synt_A%2C ATP synthase A chain%2C score 238.1%2C E-value 8.3e-69;gbkey=misc_feature;gene=atpB;inference=protein motif:PFAM:PF00119
AM286415.1	EMBL	sequence_feature	4611836	4611904	.	-	.	ID=id7384;Note=5 probable transmembrane helices predicted for YE4212 by TMHMM2.0 at aa 41-63%2C 103-125%2C 145-167%2C 214-236 and 246-268;gbkey=misc_feature;gene=atpB;inference=protein motif:TMHMM:2.0;part=1/5
AM286415.1	EMBL	sequence_feature	4611650	4611718	.	-	.	ID=id7384;Note=5 probable transmembrane helices predicted for YE4212 by TMHMM2.0 at aa 41-63%2C 103-125%2C 145-167%2C 214-236 and 246-268;gbkey=misc_feature;gene=atpB;inference=protein motif:TMHMM:2.0;part=2/5
AM286415.1	EMBL	sequence_feature	4611524	4611592	.	-	.	ID=id7384;Note=5 probable transmembrane helices predicted for YE4212 by TMHMM2.0 at aa 41-63%2C 103-125%2C 145-167%2C 214-236 and 246-268;gbkey=misc_feature;gene=atpB;inference=protein motif:TMHMM:2.0;part=3/5
AM286415.1	EMBL	sequence_feature	4611317	4611385	.	-	.	ID=id7384;Note=5 probable transmembrane helices predicted for YE4212 by TMHMM2.0 at aa 41-63%2C 103-125%2C 145-167%2C 214-236 and 246-268;gbkey=misc_feature;gene=atpB;inference=protein motif:TMHMM:2.0;part=4/5
AM286415.1	EMBL	sequence_feature	4611221	4611289	.	-	.	ID=id7384;Note=5 probable transmembrane helices predicted for YE4212 by TMHMM2.0 at aa 41-63%2C 103-125%2C 145-167%2C 214-236 and 246-268;gbkey=misc_feature;gene=atpB;inference=protein motif:TMHMM:2.0;part=5/5
AM286415.1	EMBL	sequence_feature	4611371	4611400	.	-	.	ID=id7385;Note=PS00449 ATP synthase a subunit signature.;gbkey=misc_feature;gene=atpB;inference=protein motif:Prosite:PS00449
AM286415.1	EMBL	gene	4612080	4612463	.	-	.	ID=gene4170;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;gene_synonym=uncI;locus_tag=YE4213
AM286415.1	EMBL	CDS	4612080	4612463	.	-	0	ID=cds4057;Parent=gene4170;Dbxref=EnsemblGenomes-Gn:YE4213,EnsemblGenomes-Tr:CAL14227,InterPro:IPR005598,UniProtKB/TrEMBL:A1JTD6,NCBI_GP:CAL14227.1;Name=CAL14227.1;gbkey=CDS;gene=atpI;product=ATP synthase protein I;protein_id=CAL14227.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4612086	4612460	.	-	.	ID=id7386;Note=Pfam match to entry PF03899 ATP_synt_I%2C ATP synthase I chain%2C score 114.5%2C E-value 1.3e-31;gbkey=misc_feature;gene=atpI;inference=protein motif:PFAM:PF03899
AM286415.1	EMBL	sequence_feature	4612371	4612427	.	-	.	ID=id7387;Note=4 probable transmembrane helices predicted for YE4213 by TMHMM2.0 at aa 13-31%2C 36-58%2C 71-93 and 103-125;gbkey=misc_feature;gene=atpI;inference=protein motif:TMHMM:2.0;part=1/4
AM286415.1	EMBL	sequence_feature	4612290	4612358	.	-	.	ID=id7387;Note=4 probable transmembrane helices predicted for YE4213 by TMHMM2.0 at aa 13-31%2C 36-58%2C 71-93 and 103-125;gbkey=misc_feature;gene=atpI;inference=protein motif:TMHMM:2.0;part=2/4
AM286415.1	EMBL	sequence_feature	4612185	4612253	.	-	.	ID=id7387;Note=4 probable transmembrane helices predicted for YE4213 by TMHMM2.0 at aa 13-31%2C 36-58%2C 71-93 and 103-125;gbkey=misc_feature;gene=atpI;inference=protein motif:TMHMM:2.0;part=3/4
AM286415.1	EMBL	sequence_feature	4612089	4612157	.	-	.	ID=id7387;Note=4 probable transmembrane helices predicted for YE4213 by TMHMM2.0 at aa 13-31%2C 36-58%2C 71-93 and 103-125;gbkey=misc_feature;gene=atpI;inference=protein motif:TMHMM:2.0;part=4/4
AM286415.1	EMBL	sequence_feature	4612287	4612319	.	-	.	ID=id7388;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=atpI;inference=protein motif:Prosite:PS00013
AM286415.1	EMBL	gene	4612338	4612463	.	-	.	ID=gene4171;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=other;locus_tag=YE4213
AM286415.1	EMBL	gene	4613131	4613751	.	-	.	ID=gene4172;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=YE4214
AM286415.1	EMBL	CDS	4613131	4613751	.	-	0	ID=cds4058;Parent=gene4172;Dbxref=EnsemblGenomes-Gn:YE4214,EnsemblGenomes-Tr:CAL14228,GOA:A1JTD7,InterPro:IPR003682,InterPro:IPR029063,NCBI_GP:CAL14228.1;Name=CAL14228.1;gbkey=CDS;gene=gidB;product=glucose inhibited division protein B;protein_id=CAL14228.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4613149	4613694	.	-	.	ID=id7389;Note=Pfam match to entry PF02527 GidB%2C Glucose inhibited division protein%2C score 288.1%2C E-value 7.3e-84;gbkey=misc_feature;gene=gidB;inference=protein motif:PFAM:PF02527
AM286415.1	EMBL	gene	4613899	4615788	.	-	.	ID=gene4173;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=YE4215
AM286415.1	EMBL	CDS	4613899	4615788	.	-	0	ID=cds4059;Parent=gene4173;Dbxref=EnsemblGenomes-Gn:YE4215,EnsemblGenomes-Tr:CAL14229,GOA:A1JTD9,InterPro:IPR002218,InterPro:IPR004416,InterPro:IPR020595,InterPro:IPR026904,NCBI_GP:CAL14229.1;Name=CAL14229.1;gbkey=CDS;gene=gidA;product=glucose inhibited division protein A;protein_id=CAL14229.1;transl_table=11
AM286415.1	EMBL	sequence_feature	4613920	4615770	.	-	.	ID=id7390;Note=Pfam match to entry PF01134 GIDA%2C Glucose inhibited division protein A%2C score 1518.2%2C E-value 0;gbkey=misc_feature;gene=gidA;inference=protein motif:PFAM:PF01134
AM286415.1	EMBL	sequence_feature	4614616	4614687	.	-	.	ID=id7391;Note=PS01281 Glucose inhibited division protein A family signature 2.;gbkey=misc_feature;gene=gidA;inference=protein motif:Prosite:PS01281
AM286415.1	EMBL	sequence_feature	4614928	4614972	.	-	.	ID=id7392;Note=PS01280 Glucose inhibited division protein A family signature 1.;gbkey=misc_feature;gene=gidA;inference=protein motif:Prosite:PS01280
##sequence-region AM286416.1 1 67721
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=393305
AM286416.1	EMBL	region	1	67721	.	+	.	ID=id7393;Dbxref=taxon:393305;Is_circular=true;Name=pYVe8081;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pYVe8081;strain=8081;sub-species=enterocolitica
AM286416.1	EMBL	origin_of_replication	1	650	.	+	.	ID=id7394;Note=oriR%3B putative;gbkey=rep_origin
AM286416.1	EMBL	gene	628	1287	.	+	.	ID=gene4174;Name=YEP0001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0001
AM286416.1	EMBL	CDS	628	1287	.	+	0	ID=cds4060;Parent=gene4174;Dbxref=EnsemblGenomes-Gn:YEP0001,EnsemblGenomes-Tr:CAL10025,GOA:A1JU61,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JU61,NCBI_GP:CAL10025.1;Name=CAL10025.1;Note=Similar to several putative transposases including: Agrobacterium tumefaciens IS3 family transposase SWALL:Q8UDL7 (EMBL:AE009161) (512 aa) fasta scores: E(): 3.8e-24%2C 37.56 38d in 197 aa and to Escherichia coli%2C and Shigella flexneri possible transposase of IS1353 YahA SWALL:Q9WTH9 (EMBL:AP000342) (514 aa) fasta scores: E(): 9.4e-21%2C 36.5 38d in 200 aa;gbkey=CDS;product=putative transposase;protein_id=CAL10025.1;transl_table=11
AM286416.1	EMBL	repeat_region	1206	1649	.	-	.	ID=id7395;Note=label:IS1400'%3B~partial insertion sequence element IS1400;gbkey=repeat_region
AM286416.1	EMBL	gene	1284	1571	.	-	.	ID=gene4175;Name=trp1400A;gbkey=Gene;gene=trp1400A;gene_biotype=protein_coding;locus_tag=YEP0002
AM286416.1	EMBL	CDS	1284	1571	.	-	0	ID=cds4061;Parent=gene4175;Dbxref=EnsemblGenomes-Gn:YEP0002,EnsemblGenomes-Tr:CAL10026,GOA:A1JTG9,InterPro:IPR002514,InterPro:IPR009057,UniProtKB/TrEMBL:A1JTG9,NCBI_GP:CAL10026.1;Name=CAL10026.1;Note=Similar to Yersinia enterocolitica is1400 transposase a trp1400A SWALL:Q9X9H8 (EMBL:AJ132945) (96 aa) fasta scores: E(): 4.6e-31%2C 96.84 38d in 95 aa%2C and to Escherichia coli O6 transposase c2472 SWALL:AAN80931 (EMBL:AE016762) (88 aa) fasta scores: E(): 5.6e-28%2C 93.18 id in 88 aa;gbkey=CDS;gene=trp1400A;product=IS1400 transposase A;protein_id=CAL10026.1;transl_table=11
AM286416.1	EMBL	repeat_region	1638	1649	.	-	.	ID=id7396;Note=putative inverted repeats for IS1400;gbkey=repeat_region
AM286416.1	EMBL	gene	1674	2108	.	+	.	ID=gene4176;Name=YEP0003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0003
AM286416.1	EMBL	CDS	1674	2108	.	+	0	ID=cds4062;Parent=gene4176;Dbxref=EnsemblGenomes-Gn:YEP0003,EnsemblGenomes-Tr:CAL10027,GOA:A1JU63,InterPro:IPR001584,InterPro:IPR012337,UniProtKB/TrEMBL:A1JU63,NCBI_GP:CAL10027.1;Name=CAL10027.1;Note=Highly similar to Shigella flexneri 2a IS1353 putative transposase-like protein cp0118 SWALL:Q8VSI3 (EMBL:AF386526) (140 aa) fasta scores: E(): 2.3e-52%2C84.17 38d in 139 aa. Also similar to the C-termini of many other transposases including: Agrobacterium tumefaciens IS3 family transposase SWALL:Q8UDL7 (EMBL:AE009161) (512 aa) fasta scores: E(): 2.9e-43%2C 69.93 38d in 143 aa and Klebsiella pneumoniae IS1353 putative transposase SWALL:AAM89407 (EMBL:AY123253) (514 aa) fasta scores: E(): 2.9e-39%2C 63.38 38d in 142 aa;gbkey=CDS;product=putative transposase;protein_id=CAL10027.1;transl_table=11
AM286416.1	EMBL	sequence_feature	1674	2087	.	+	.	ID=id7397;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 85.4%2C E-value 8.4e-23;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286416.1	EMBL	gene	2291	2839	.	-	.	ID=gene4177;Name=yopQ;gbkey=Gene;gene=yopQ;gene_biotype=protein_coding;locus_tag=YEP0004
AM286416.1	EMBL	CDS	2291	2839	.	-	0	ID=cds4063;Parent=gene4177;Dbxref=EnsemblGenomes-Gn:YEP0004,EnsemblGenomes-Tr:CAL10028,InterPro:IPR016505,UniProtKB/TrEMBL:A1JU64,NCBI_GP:CAL10028.1;Name=CAL10028.1;Note=Previously sequenced as Yersinia enterocolitica YopQ protein precursor or Yop20 SWALL:YOPQ_YEREN (SWALL:P27474) (182 aa) fasta scores: E(): 2.4e-72%2C 99.45 id in 182 aa%2C and to Yersinia enterocolitica YopQ SWALL:Q93KV1 (EMBL:AF336309) (182 aa) fasta scores: E(): 1.5e-72%2C 100 38d in 182 aa;gbkey=CDS;gene=yopQ;inference=similar to sequence:UniProtKB:P27474;product=virulence plasmid protein;protein_id=CAL10028.1;transl_table=11
AM286416.1	EMBL	sequence_feature	2294	2305	.	-	.	ID=id7398;Note=PS00294 Prenyl group binding site (CAAX box).;gbkey=misc_feature;gene=yopQ;inference=protein motif:Prosite:PS00294
AM286416.1	EMBL	gene	3352	4320	.	+	.	ID=gene4178;Name=yopT;gbkey=Gene;gene=yopT;gene_biotype=protein_coding;locus_tag=YEP0005
AM286416.1	EMBL	CDS	3352	4320	.	+	0	ID=cds4064;Parent=gene4178;Dbxref=EnsemblGenomes-Gn:YEP0005,EnsemblGenomes-Tr:CAL10029,GOA:A1JU65,InterPro:IPR003951,InterPro:IPR006473,NCBI_GP:CAL10029.1;Name=CAL10029.1;Note=Previously sequenced: Yersinia enterocolitica plasmid type III secretion system effector protein YopT or ypcd1.20 SWALL:Q93KV0 (EMBL:AF336309) (322 aa) fasta scores: E(): 8.1e-132%2C 100 38d in 322 aa;gbkey=CDS;gene=yopT;product=plasmid type III secretion system effector protein;protein_id=CAL10029.1;transl_table=11
AM286416.1	EMBL	sequence_feature	3409	4146	.	+	.	ID=id7399;Note=Pfam match to entry PF03543 YerHae_surfAg%2CYersinia/Haemophilus virulence surface antigen%2C score 580.4%2C E-value 8.3e-172;gbkey=misc_feature;gene=yopT;inference=protein motif:PFAM:PF03543
AM286416.1	EMBL	gene	4320	4712	.	+	.	ID=gene4179;Name=sycT;gbkey=Gene;gene=sycT;gene_biotype=protein_coding;locus_tag=YEP0006
AM286416.1	EMBL	CDS	4320	4712	.	+	0	ID=cds4065;Parent=gene4179;Dbxref=EnsemblGenomes-Gn:YEP0006,EnsemblGenomes-Tr:CAL10030,GOA:A1JU66,InterPro:IPR010261,NCBI_GP:CAL10030.1;Name=CAL10030.1;Note=Previously sequenced as Yersinia enterocolitica YopT chaperone SycT SWALL:Q93KU9 (EMBL:AF336309) (130 aa) fasta scores: E(): 5.9e-53%2C 100 38d in 130 aa and to Yersinia pestis yopt chaperone syct or ypcd1.21 SWALL:Q9ZGW6 (EMBL:AF074612) (132 aa) fasta scores: E(): 1.3e-51%2C 97.72 38d in 132 aa;gbkey=CDS;gene=sycT;product=chaperone of YopT;protein_id=CAL10030.1;transl_table=11
AM286416.1	EMBL	gene	6065	6202	.	-	.	ID=gene4180;Name=YEP0007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0007
AM286416.1	EMBL	CDS	6065	6202	.	-	0	ID=cds4066;Parent=gene4180;Dbxref=EnsemblGenomes-Gn:YEP0007,EnsemblGenomes-Tr:CAL10031,UniProtKB/TrEMBL:A1JU67,NCBI_GP:CAL10031.1;Name=CAL10031.1;Note=Similar to the C-terminus of Yersinia pestis hypothetical protein Y0062 or Ypcd1.23 SWALL:Q9ZGW8 (EMBL:AF074612) (139 aa) fasta scores: E(): 1.6e-18%2C95.55 38d in 45 aa%2C and to Salmonella typhimurium lytic enzyme Stm1868A SWALL:Q8ZNX9 (EMBL:AE008783) (55 aa) fasta scores: E(): 0.00018%2C 41.86 38d in 43 aa;gbkey=CDS;product=putative exported protein;protein_id=CAL10031.1;transl_table=11
AM286416.1	EMBL	sequence_feature	6122	6190	.	-	.	ID=id7400;Note=1 probable transmembrane helix predicted for YEP.08c by TMHMM2.0 at aa 5-27;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286416.1	EMBL	pseudogene	6479	6939	.	-	.	ID=gene4181;Name=YEP0008;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0008;pseudo=true
AM286416.1	EMBL	CDS	6739	6939	.	-	0	ID=cds4067;Parent=gene4181;Note=This CDS appears to be a partial CDS with similarity to many transposases e.g. Yersinia intermedia transposase SWALL:O87921 (EMBL:Y18002) (245 aa) fasta scores: E(): 1e-48%2C 84.86 38d in 152 aa;gbkey=CDS;product=putative transposase (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	CDS	6617	6736	.	-	0	ID=cds4067;Parent=gene4181;Note=This CDS appears to be a partial CDS with similarity to many transposases e.g. Yersinia intermedia transposase SWALL:O87921 (EMBL:Y18002) (245 aa) fasta scores: E(): 1e-48%2C 84.86 38d in 152 aa;gbkey=CDS;product=putative transposase (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	CDS	6479	6613	.	-	0	ID=cds4067;Parent=gene4181;Note=This CDS appears to be a partial CDS with similarity to many transposases e.g. Yersinia intermedia transposase SWALL:O87921 (EMBL:Y18002) (245 aa) fasta scores: E(): 1e-48%2C 84.86 38d in 152 aa;gbkey=CDS;product=putative transposase (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	pseudogene	7099	7362	.	+	.	ID=gene4182;Name=YEP0009;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YEP0009;part=1/2;pseudo=true
AM286416.1	EMBL	pseudogene	7364	7681	.	+	.	ID=gene4182;Name=YEP0009;gbkey=Gene;gene_biotype=pseudogene;is_ordered=true;locus_tag=YEP0009;part=2/2;pseudo=true
AM286416.1	EMBL	CDS	7099	7362	.	+	0	ID=cds4068;Parent=gene4182;Note=Similar to many including the very N- and C-termini of Yersinia enterocolitica hypothetical 45.7 kDa protein SWALL:Q93KR3 (EMBL:AF336309) (400 aa) fasta scores: E(): 5.7e-26%2C 41.5 38d in 400 aa. Also similar in part to many proposed transposases including: Yersinia pestis putative transposase SWALL:O68702 (EMBL:AF053946) (99 aa) fasta scores: E(): 4.1e-33%2C 90.9 38d in 99 aa and to Yersinia pestis KIM putative transposase Y2038 SWALL:AAM85604 (EMBL:AE013806) (374 aa) fasta scores: E(): 1e-13%2C 44.44 38d in 99 aa. This CDS has undergone at least one deletion event and has a frameshift mutation following codon 89;gbkey=CDS;product=putative transposase (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	CDS	7364	7681	.	+	0	ID=cds4068;Parent=gene4182;Note=Similar to many including the very N- and C-termini of Yersinia enterocolitica hypothetical 45.7 kDa protein SWALL:Q93KR3 (EMBL:AF336309) (400 aa) fasta scores: E(): 5.7e-26%2C 41.5 38d in 400 aa. Also similar in part to many proposed transposases including: Yersinia pestis putative transposase SWALL:O68702 (EMBL:AF053946) (99 aa) fasta scores: E(): 4.1e-33%2C 90.9 38d in 99 aa and to Yersinia pestis KIM putative transposase Y2038 SWALL:AAM85604 (EMBL:AE013806) (374 aa) fasta scores: E(): 1e-13%2C 44.44 38d in 99 aa. This CDS has undergone at least one deletion event and has a frameshift mutation following codon 89;gbkey=CDS;product=putative transposase (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	sequence_feature	7111	7362	.	+	.	ID=id7401;Note=Pfam match to entry PF00872 Transpo_mutator%2CTransposase%2C Mutator family%2C score 26.9%2C E-value 7e-08;gbkey=misc_feature;inference=protein motif:PFAM:PF00872
AM286416.1	EMBL	sequence_feature	7424	7597	.	+	.	ID=id7402;Note=Pfam match to entry PF00872 Transpo_mutator%2CTransposase%2C Mutator family%2C score 37.7%2C E-value 5.8e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00872
AM286416.1	EMBL	gene	7724	8827	.	-	.	ID=gene4183;Name=yopM;gbkey=Gene;gene=yopM;gene_biotype=protein_coding;locus_tag=YEP0010
AM286416.1	EMBL	CDS	7724	8827	.	-	0	ID=cds4069;Parent=gene4183;Dbxref=EnsemblGenomes-Gn:YEP0010,EnsemblGenomes-Tr:CAL10034,InterPro:IPR001611,UniProtKB/TrEMBL:A1JU68,NCBI_GP:CAL10034.1;Name=CAL10034.1;Note=Previously sequenced:Yersinia enterocolitica virulence plasmid type III secretion system effector protein YopM SWALL:Q93KU8 (EMBL:AF336309) (367 aa) fasta scores: E(): 3.9e-133%2C 100 38d in 367 aa and to Yersinia pestis outer membrane protein YopM or Yop48 or Ypcd1.26c or y0059 SWALL:YOPM_YERPE (SWALL:P17778) (409 aa) fasta scores: E(): 1.9e-78%2C 81.66 38d in 409 aa;gbkey=CDS;gene=yopM;inference=similar to sequence:UniProtKB:P17778;product=yop type III secretion system effector protein;protein_id=CAL10034.1;transl_table=11
AM286416.1	EMBL	sequence_feature	7805	7882	.	-	.	ID=id7403;Note=Pfam match to entry PF00560 LRR%2C Leucine Rich Repeat%2C score 10.7%2C E-value 2.5;gbkey=misc_feature;gene=yopM;inference=protein motif:PFAM:PF00560
AM286416.1	EMBL	sequence_feature	7934	8002	.	-	.	ID=id7404;Note=Pfam match to entry PF00560 LRR%2C Leucine Rich Repeat%2C score 12.3%2C E-value 0.85;gbkey=misc_feature;gene=yopM;inference=protein motif:PFAM:PF00560
AM286416.1	EMBL	sequence_feature	8114	8182	.	-	.	ID=id7405;Note=Pfam match to entry PF00560 LRR%2C Leucine Rich Repeat%2C score 15.7%2C E-value 0.078;gbkey=misc_feature;gene=yopM;inference=protein motif:PFAM:PF00560
AM286416.1	EMBL	sequence_feature	8243	8308	.	-	.	ID=id7406;Note=Pfam match to entry PF00560 LRR%2C Leucine Rich Repeat%2C score 11.7%2C E-value 1.3;gbkey=misc_feature;gene=yopM;inference=protein motif:PFAM:PF00560
AM286416.1	EMBL	sequence_feature	8369	8434	.	-	.	ID=id7407;Note=Pfam match to entry PF00560 LRR%2C Leucine Rich Repeat%2C score 10.1%2C E-value 3.6;gbkey=misc_feature;gene=yopM;inference=protein motif:PFAM:PF00560
AM286416.1	EMBL	sequence_feature	8486	8554	.	-	.	ID=id7408;Note=Pfam match to entry PF00560 LRR%2C Leucine Rich Repeat%2C score 14.2%2C E-value 0.22;gbkey=misc_feature;gene=yopM;inference=protein motif:PFAM:PF00560
AM286416.1	EMBL	gene	8950	9168	.	+	.	ID=gene4184;Name=YEP0011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0011
AM286416.1	EMBL	CDS	8950	9168	.	+	0	ID=cds4070;Parent=gene4184;Dbxref=EnsemblGenomes-Gn:YEP0011,EnsemblGenomes-Tr:CAL10035,UniProtKB/TrEMBL:A1JU69,NCBI_GP:CAL10035.1;Name=CAL10035.1;Note=Previously sequenced:Yersinia enterocolitica hypothetical 8.0 kDa protein orf91B SWALL:Q93KU7 (EMBL:AF336309) (72 aa) fasta scores: E(): 2.1e-29%2C 100 id in 72 aa. No other significant database hits;gbkey=CDS;product=putative membrane protein;protein_id=CAL10035.1;transl_table=11
AM286416.1	EMBL	sequence_feature	9079	9147	.	+	.	ID=id7409;Note=1 probable transmembrane helix predicted for YEP.15 by TMHMM2.0 at aa 44-66;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286416.1	EMBL	gene	9654	10574	.	-	.	ID=gene4185;Name=yopD;gbkey=Gene;gene=yopD;gene_biotype=protein_coding;locus_tag=YEP0012
AM286416.1	EMBL	CDS	9654	10574	.	-	0	ID=cds4071;Parent=gene4185;Dbxref=EnsemblGenomes-Gn:YEP0012,EnsemblGenomes-Tr:CAL10036,InterPro:IPR008898,UniProtKB/TrEMBL:A1JU70,NCBI_GP:CAL10036.1;Name=CAL10036.1;Note=Previously sequenced: Yersinia enterocolitica YopD translocator protein SWALL:YOPD_YEREN (SWALL:P37132) (306 aa) fasta scores: E(): 4e-96%2C 98.36 38d in 306 aa%2C and to Yersinia pestis YopD homolog or Ypcd1.28C SWALL:O68699 (EMBL:AF053946) (306 aa) fasta scores: E(): 2.8e-95%2C97.71 38d in 306 aa%2C and to Yersinia pseudotuberculosis YopD protein SWALL:YOPD_YERPS (SWALL:Q06131) (306 aa) fasta scores: E(): 5.3e-95%2C 97.38 38d in 306 aa%2C and to Pseudomonas aeruginosa translocator protein PopD popd or pa1709 SWALL:Q9I323 (EMBL:AE004597) (295 aa) fasta scores: E(): 2.2e-31%2C 40.76 38d in 287 aa;gbkey=CDS;gene=yopD;inference=similar to sequence:UniProtKB:Q06131;product=translocator protein;protein_id=CAL10036.1;transl_table=11
AM286416.1	EMBL	gene	10593	11798	.	-	.	ID=gene4186;Name=yopB;gbkey=Gene;gene=yopB;gene_biotype=protein_coding;locus_tag=YEP0013
AM286416.1	EMBL	CDS	10593	11798	.	-	0	ID=cds4072;Parent=gene4186;Dbxref=EnsemblGenomes-Gn:YEP0013,EnsemblGenomes-Tr:CAL10037,GOA:A1JU71,InterPro:IPR006972,UniProtKB/TrEMBL:A1JU71,NCBI_GP:CAL10037.1;Name=CAL10037.1;Note=Previously sequenced: Yersinia enterocolitica virulence plasmid YopB transmembrane protein SWALL:YOPB_YEREN (SWALL:P37131) (401 aa) fasta scores: E(): 2.2e-121%2C 98.75 38d in 401 aa%2C and to Yersinia pseudotuberculosis YopB protein yopB SWALL:YOPB_YERPS (SWALL:Q06114) (401 aa) fasta scores: E(): 1e-119%2C 96.5 id in 401 aa%2C and to Yersinia pestis yopb homolog yopb or ypcd1.29C SWALL:O68698 (EMBL:AF053946) (401 aa) fasta scores: E(): 1.9e-119%2C 96.25 38d in 401 aa;gbkey=CDS;gene=yopB;inference=similar to sequence:UniProtKB:Q06114;product=virulence plasmid YopB transmembrane effector protein;protein_id=CAL10037.1;transl_table=11
AM286416.1	EMBL	sequence_feature	10596	11798	.	-	.	ID=id7410;Note=Pfam match to entry PF04888 SseC%2C Secretion system effector C (SseC) like family%2C score 709.7%2C E-value 9.3e-211;gbkey=misc_feature;gene=yopB;inference=protein motif:PFAM:PF04888
AM286416.1	EMBL	sequence_feature	11235	11303	.	-	.	ID=id7411;Note=1 probable transmembrane helix predicted for yopB by TMHMM2.0 at aa 166-188;gbkey=misc_feature;gene=yopB;inference=protein motif:TMHMM:2.0
AM286416.1	EMBL	gene	11776	12282	.	-	.	ID=gene4187;Name=sycD;gbkey=Gene;gene=sycD;gene_biotype=protein_coding;locus_tag=YEP0014
AM286416.1	EMBL	CDS	11776	12282	.	-	0	ID=cds4073;Parent=gene4187;Dbxref=EnsemblGenomes-Gn:YEP0014,EnsemblGenomes-Tr:CAL10038,GOA:A1JU72,InterPro:IPR005415,InterPro:IPR011716,InterPro:IPR011990,InterPro:IPR013026,InterPro:IPR016379,UniProtKB/TrEMBL:A1JU72,NCBI_GP:CAL10038.1;Name=CAL10038.1;Note=Previously sequenced: Yersinia enterocolitica yopB/D chaperone/regulatory protein SycD SWALL:AAK69212 (EMBL:AF336309) (168 aa) fasta scores: E(): 4.8e-67%2C 100 id in 168 aa. Also highly similar to Yersinia pseudotuberculosis low calcium response locus protein H LcrH SWALL:LCRH_YERPS (SWALL:P23995) (168 aa) fasta scores: E(): 4.8e-67%2C 100 38d in 168 aa%2C and to Yersinia pestis low calcium response locus protein H LcrH or Ypcd1.30c or y0051 SWALL:LCRH_YERPE (SWALL:P21207) (168 aa) fasta scores: E(): 2.6e-66%2C 99.4 38d in 168 aa;gbkey=CDS;gene=sycD;inference=similar to sequence:UniProtKB:P23995;product=yopB/D chaperone/regulatory protein;protein_id=CAL10038.1;transl_table=11
AM286416.1	EMBL	gene	12285	13259	.	-	.	ID=gene4188;Name=lcrV;gbkey=Gene;gene=lcrV;gene_biotype=protein_coding;locus_tag=YEP0015
AM286416.1	EMBL	CDS	12285	13259	.	-	0	ID=cds4074;Parent=gene4188;Dbxref=EnsemblGenomes-Gn:YEP0015,EnsemblGenomes-Tr:CAL10039,GOA:A1JU73,InterPro:IPR005413,UniProtKB/TrEMBL:A1JU73,NCBI_GP:CAL10039.1;Name=CAL10039.1;Note=Previously sequenced: Yersinia enterocolitica virulence-associated V antigen LcrV SWALL:Q93KU4 (EMBL:AF336309) (324 aa) fasta scores: E(): 1.9e-111%2C 100 id in 324 aa. Also highly similar to Yersinia pseudotuberculosis virulence-associated V antigen LcrV SWALL:LCRV_YERPS (SWALL:P23994) (326 aa) fasta scores: E(): 2.5e-107%2C 96.28 38d in 323 aa and to Yersinia pestis virulence-associated V antigen LcrV or Ypcd1.31c or y0050 SWALL:LCRV_YERPE (SWALL:P21206) (326 aa) fasta scores: E(): 4.7e-106%2C 95.66 38d in 323 aa;gbkey=CDS;gene=lcrV;inference=similar to sequence:UniProtKB:P23994;product=virulence-associated V antigen;protein_id=CAL10039.1;transl_table=11
AM286416.1	EMBL	sequence_feature	12291	13259	.	-	.	ID=id7412;Note=Pfam match to entry PF04792 LcrV%2C V antigen (LcrV) protein%2C score 876.9%2C E-value 4.4e-261;gbkey=misc_feature;gene=lcrV;inference=protein motif:PFAM:PF04792
AM286416.1	EMBL	gene	13261	13548	.	-	.	ID=gene4189;Name=lcrG;gbkey=Gene;gene=lcrG;gene_biotype=protein_coding;locus_tag=YEP0016
AM286416.1	EMBL	CDS	13261	13548	.	-	0	ID=cds4075;Parent=gene4189;Dbxref=EnsemblGenomes-Gn:YEP0016,EnsemblGenomes-Tr:CAL10040,InterPro:IPR009863,UniProtKB/TrEMBL:A1JU74,NCBI_GP:CAL10040.1;Name=CAL10040.1;Note=Previously sequenced: Yersinia enterocolitica LcrG SWALL:Q93KU3 (EMBL:AF336309) (95 aa) fasta scores: E(): 5.2e-32%2C 100 38d in 95 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis low calcium response locus protein G LcrG or Ypcd1.32c or Y0049 SWALL:LCRG_YERPE (SWALL:P19394) (95 aa) fasta scores: E(): 1.8e-31%2C 98.94 38d in 95 aa;gbkey=CDS;gene=lcrG;inference=similar to sequence:UniProtKB:P19394;product=low calcium response locus protein g;protein_id=CAL10040.1;transl_table=11
AM286416.1	EMBL	gene	13590	14030	.	-	.	ID=gene4190;Name=lcrR;gbkey=Gene;gene=lcrR;gene_biotype=protein_coding;locus_tag=YEP0017
AM286416.1	EMBL	CDS	13590	14030	.	-	0	ID=cds4076;Parent=gene4190;Dbxref=EnsemblGenomes-Gn:YEP0017,EnsemblGenomes-Tr:CAL10041,InterPro:IPR013405,InterPro:IPR022797,NCBI_GP:CAL10041.1;Name=CAL10041.1;Note=Previously sequenced: Yersinia enterocolitica low calcium response locus protein R which may play an important role in its regulation%2C LcrR SWALL:LCRR_YEREN (SWALL:O68549) (146 aa) fasta scores: E(): 4e-62%2C 99.31 id in 146 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis low calcium response locus protein R LcrR or Ypcd1.33c or Y0048 SWALL:LCRR_YERPE (SWALL:P19393) (146 aa) fasta scores: E(): 1.3e-61%2C 98.63 id in 146 aa;gbkey=CDS;gene=lcrR;inference=similar to sequence:UniProtKB:P19393;product=low calcium response locus protein R;protein_id=CAL10041.1;transl_table=11
AM286416.1	EMBL	gene	14027	16141	.	-	.	ID=gene4191;Name=lcrD;gbkey=Gene;gene=lcrD;gene_biotype=protein_coding;locus_tag=YEP0018
AM286416.1	EMBL	CDS	14027	16141	.	-	0	ID=cds4077;Parent=gene4191;Dbxref=EnsemblGenomes-Gn:YEP0018,EnsemblGenomes-Tr:CAL10042,GOA:A1JU76,InterPro:IPR001712,InterPro:IPR006302,InterPro:IPR025505,NCBI_GP:CAL10042.1;Name=CAL10042.1;Note=Previously sequenced: Yersinia enterocolitica low calcium response locus integral membrane protein D LcrD SWALL:LCRD_YEREN (SWALL:P21210) (704 aa) fasta scores: E(): 0%2C 99.57 38d in 704 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis low calcium response locus protein D LcrD or Ypcd1.34c or Y0047 SWALL:LCRD_YERPE (SWALL:P31487) (704 aa) fasta scores: E(): 0%2C 99 38d in 704 aa;gbkey=CDS;gene=lcrD;inference=similar to sequence:UniProtKB:P31487;product=low calcium response locus membrane protein d;protein_id=CAL10042.1;transl_table=11
AM286416.1	EMBL	sequence_feature	14054	16066	.	-	.	ID=id7413;Note=Pfam match to entry PF00771 FHIPEP%2C FHIPEP family%2C score 1345.4%2C E-value 0;gbkey=misc_feature;gene=lcrD;inference=protein motif:PFAM:PF00771
AM286416.1	EMBL	sequence_feature	15197	15229	.	-	.	ID=id7414;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=lcrD;inference=protein motif:Prosite:PS00013
AM286416.1	EMBL	sequence_feature	16025	16084	.	-	.	ID=id7415;Note=7 probable transmembrane helices predicted for lcrD by TMHMM2.0 at aa 20-39%2C 43-65%2C 72-94%2C 109-131%2C 201-220%2C235-257 and 291-313;gbkey=misc_feature;gene=lcrD;inference=protein motif:TMHMM:2.0;is_ordered=true;part=1/7;partial=true
AM286416.1	EMBL	sequence_feature	15947	16015	.	-	.	ID=id7415;Note=7 probable transmembrane helices predicted for lcrD by TMHMM2.0 at aa 20-39%2C 43-65%2C 72-94%2C 109-131%2C 201-220%2C235-257 and 291-313;gbkey=misc_feature;gene=lcrD;inference=protein motif:TMHMM:2.0;is_ordered=true;part=2/7;partial=true
AM286416.1	EMBL	sequence_feature	15860	15928	.	-	.	ID=id7415;Note=7 probable transmembrane helices predicted for lcrD by TMHMM2.0 at aa 20-39%2C 43-65%2C 72-94%2C 109-131%2C 201-220%2C235-257 and 291-313;gbkey=misc_feature;gene=lcrD;inference=protein motif:TMHMM:2.0;is_ordered=true;part=3/7;partial=true
AM286416.1	EMBL	sequence_feature	15749	15817	.	-	.	ID=id7415;Note=7 probable transmembrane helices predicted for lcrD by TMHMM2.0 at aa 20-39%2C 43-65%2C 72-94%2C 109-131%2C 201-220%2C235-257 and 291-313;gbkey=misc_feature;gene=lcrD;inference=protein motif:TMHMM:2.0;is_ordered=true;part=4/7;partial=true
AM286416.1	EMBL	sequence_feature	15482	15541	.	-	.	ID=id7415;Note=7 probable transmembrane helices predicted for lcrD by TMHMM2.0 at aa 20-39%2C 43-65%2C 72-94%2C 109-131%2C 201-220%2C235-257 and 291-313;gbkey=misc_feature;gene=lcrD;inference=protein motif:TMHMM:2.0;is_ordered=true;part=5/7;partial=true
AM286416.1	EMBL	sequence_feature	15371	15439	.	-	.	ID=id7415;Note=7 probable transmembrane helices predicted for lcrD by TMHMM2.0 at aa 20-39%2C 43-65%2C 72-94%2C 109-131%2C 201-220%2C235-257 and 291-313;gbkey=misc_feature;gene=lcrD;inference=protein motif:TMHMM:2.0;is_ordered=true;part=6/7;partial=true
AM286416.1	EMBL	sequence_feature	15203	15271	.	-	.	ID=id7415;Note=7 probable transmembrane helices predicted for lcrD by TMHMM2.0 at aa 20-39%2C 43-65%2C 72-94%2C 109-131%2C 201-220%2C235-257 and 291-313;gbkey=misc_feature;gene=lcrD;inference=protein motif:TMHMM:2.0;is_ordered=true;part=7/7;partial=true
AM286416.1	EMBL	sequence_feature	15659	15730	.	-	.	ID=id7416;Note=PS00994 Bacterial export FHIPEP family signature.;gbkey=misc_feature;gene=lcrD;inference=protein motif:Prosite:PS00994
AM286416.1	EMBL	gene	16128	16472	.	-	.	ID=gene4192;Name=yscY;gbkey=Gene;gene=yscY;gene_biotype=protein_coding;locus_tag=YEP0019
AM286416.1	EMBL	CDS	16128	16472	.	-	0	ID=cds4078;Parent=gene4192;Dbxref=EnsemblGenomes-Gn:YEP0019,EnsemblGenomes-Tr:CAL10043,GOA:A1JU77,InterPro:IPR011990,InterPro:IPR016684,NCBI_GP:CAL10043.1;Name=CAL10043.1;Note=Previously sequenced: Yersinia enterocolitica YscY SWALL:Q93KU0 (EMBL:AF336309) (114 aa) fasta scores: E(): 9.5e-49%2C 100 38d in 114 aa. Also highly similar to Yersinia pestis hypothetical protein Ypcd1.35c or Y0046 SWALL:Y6D5_YERPE (SWALL:P21209) (114 aa) fasta scores: E(): 7.9e-48%2C 99.11 38d in 113 aa;gbkey=CDS;gene=yscY;inference=similar to sequence:UniProtKB:P21209;product=conserved hypothetical protein;protein_id=CAL10043.1;transl_table=11
AM286416.1	EMBL	gene	16469	16837	.	-	.	ID=gene4193;Name=yscX;gbkey=Gene;gene=yscX;gene_biotype=protein_coding;locus_tag=YEP0020
AM286416.1	EMBL	CDS	16469	16837	.	-	0	ID=cds4079;Parent=gene4193;Dbxref=EnsemblGenomes-Gn:YEP0020,EnsemblGenomes-Tr:CAL10044,GOA:A1JU78,InterPro:IPR012672,NCBI_GP:CAL10044.1;Name=CAL10044.1;Note=Previously sequenced: Yersinia enterocolitica hypothetical protein SWALL:YLC3_YEREN (SWALL:P21208) (122 aa) fasta scores: E(): 1.8e-46%2C 99.18 38d in 122 aa. Also highly similar to Y. ersinia pestis and Y. enterocolitica hypothetical 13.8 kDa protein Y0045 or Ypcd1.36c or YscX SWALL:O68696 (EMBL:AF053946) (122 aa) fasta scores: E(): 9.9e-47%2C 100 38d in 122 aa;gbkey=CDS;gene=yscX;inference=similar to sequence:UniProtKB:P21208;product=conserved hypothetical protein;protein_id=CAL10044.1;transl_table=11
AM286416.1	EMBL	gene	16834	17205	.	-	.	ID=gene4194;Name=sycN;gbkey=Gene;gene=sycN;gene_biotype=protein_coding;locus_tag=YEP0021
AM286416.1	EMBL	CDS	16834	17205	.	-	0	ID=cds4080;Parent=gene4194;Dbxref=EnsemblGenomes-Gn:YEP0021,EnsemblGenomes-Tr:CAL10045,GOA:A1JU79,InterPro:IPR012673,NCBI_GP:CAL10045.1;Name=CAL10045.1;Note=Previously sequenced: Yersinia enterocolitica YopN chaperone SycN SWALL:Q93KT9 (EMBL:AF336309) (123 aa) fasta scores: E(): 1.6e-48%2C 100 38d in 123 aa. Also highly similar to Yersinia pestis and Yersinia pseudotuberculosis hypothetical protein Ypcd1.37c or Y0044 SWALL:Y6D7_YERPE (SWALL:P16162) (123 aa) fasta scores: E(): 3.6e-48%2C 99.18 id in 123 aa;gbkey=CDS;gene=sycN;inference=similar to sequence:UniProtKB:P16162;product=YopN chaperone SycN;protein_id=CAL10045.1;transl_table=11
AM286416.1	EMBL	gene	17192	17470	.	-	.	ID=gene4195;Name=tyeA;gbkey=Gene;gene=tyeA;gene_biotype=protein_coding;locus_tag=YEP0022
AM286416.1	EMBL	CDS	17192	17470	.	-	0	ID=cds4081;Parent=gene4195;Dbxref=EnsemblGenomes-Gn:YEP0022,EnsemblGenomes-Tr:CAL10046,InterPro:IPR013351,InterPro:IPR015144,UniProtKB/TrEMBL:A1JU80,NCBI_GP:CAL10046.1;Name=CAL10046.1;Note=Previously sequenced: Yersinia enterocolitica TyeA SWALL:AAK69221 (EMBL:AF336309) (92 aa) fasta scores: E(): 9.8e-35%2C 100 38d in 92 aa. Also highly similar to Yersinia pestis%2C Yersinia enterocolitica%2C and Yersinia pseudotuberculosis protein TyeA or Ypcd1.38c or Y0043 SWALL:TYEA_YERPE (SWALL:P16161) (92 aa) fasta scores: E(): 9.8e-35%2C 100 38d in 92 aa;gbkey=CDS;gene=tyeA;inference=similar to sequence:UniProtKB:P16161;product=type III secretion system protein;protein_id=CAL10046.1;transl_table=11
AM286416.1	EMBL	gene	17451	18332	.	-	.	ID=gene4196;Name=yopN;gbkey=Gene;gene=yopN;gene_biotype=protein_coding;locus_tag=YEP0023
AM286416.1	EMBL	CDS	17451	18332	.	-	0	ID=cds4082;Parent=gene4196;Dbxref=EnsemblGenomes-Gn:YEP0023,EnsemblGenomes-Tr:CAL10047,GOA:A1JU81,InterPro:IPR010812,InterPro:IPR013401,UniProtKB/TrEMBL:A1JU81,NCBI_GP:CAL10047.1;Name=CAL10047.1;Note=Previously sequenced: Yersinia enterocolitica plasmid type III secretion system outer membrane protein YopN or LcrE SWALL:YOPN_YEREN (SWALL:P16945) (292 aa) fasta scores: E(): 7.8e-96%2C 95.54 38d in 292 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis outer membrane protein YopN or LcrE or Ypcd1.39c or y0042 SWALL:YOPN_YERPE (SWALL:P16160) (292 aa) fasta scores: E(): 6.3e-99%2C 97.6 38d in 292 aa;gbkey=CDS;gene=yopN;inference=similar to sequence:UniProtKB:P16945;product=type III secretion outer membrane protein;protein_id=CAL10047.1;transl_table=11
AM286416.1	EMBL	gene	18530	19849	.	+	.	ID=gene4197;Name=yscN;gbkey=Gene;gene=yscN;gene_biotype=protein_coding;locus_tag=YEP0024
AM286416.1	EMBL	CDS	18530	19849	.	+	0	ID=cds4083;Parent=gene4197;Dbxref=EnsemblGenomes-Gn:YEP0024,EnsemblGenomes-Tr:CAL10048,GOA:A1JU82,InterPro:IPR000194,InterPro:IPR003593,InterPro:IPR004100,InterPro:IPR005714,InterPro:IPR013380,InterPro:IPR020003,InterPro:IPR027417,UniProtKB/TrEMBL:A1JU82,NCBI_GP:CAL10048.1;Name=CAL10048.1;Note=Previously sequenced: Yersinia enterocolitica probable ATP synthase YscN SWALL:YSCN_YEREN (SWALL:P40290) (439 aa) fasta scores: E(): 8e-158%2C 99.76 38d in 427 aa. Also highly similar to Yersinia pestis%2C and Yersinia enterocolitica Yops secretion ATPase YscN or Ypcd1.40 SWALL:O68695 (EMBL:AF053946) (439 aa) fasta scores: E(): 4e-158%2C 100 38d in 427 aa%2C and to Yersinia pseudotuberculosis probable ATP synthase YscN SWALL:YSCN_YERPS (SWALL:P40291) (439 aa) fasta scores: E(): 1.2e-156%2C 99.29 38d in 427 aa%2C and to Pseudomonas aeruginosa ATP synthase in type III secretion system Pa1697 SWALL:Q9I330 (EMBL:AE004596) (440 aa) fasta scores: E(): 1.3e-130%2C 84.89 38d in 417 aa;gbkey=CDS;gene=yscN;inference=similar to sequence:UniProtKB:P40291;product=probable type III secretion system ATP synthase;protein_id=CAL10048.1;transl_table=11
AM286416.1	EMBL	sequence_feature	18608	18805	.	+	.	ID=id7417;Note=Pfam match to entry PF02874 ATP-synt_ab_N%2C ATP synthase alpha/beta family%2C beta-barrel domain%2C score 59.0%2C E-value 7.5e-15;gbkey=misc_feature;gene=yscN;inference=protein motif:PFAM:PF02874
AM286416.1	EMBL	sequence_feature	18812	19621	.	+	.	ID=id7418;Note=Pfam match to entry PF00006 ATP-synt_ab%2C ATP synthase alpha/beta family%2C nucleotide-binding domain%2C score 512.5%2C E-value 2.2e-151;gbkey=misc_feature;gene=yscN;inference=protein motif:PFAM:PF00006
AM286416.1	EMBL	sequence_feature	19034	19057	.	+	.	ID=id7419;Note=PS00017 ATP/GTP-binding site motif A (P-loop).;gbkey=misc_feature;gene=yscN;inference=protein motif:Prosite:PS00017
AM286416.1	EMBL	sequence_feature	19574	19603	.	+	.	ID=id7420;Note=PS00152 ATP synthase alpha and beta subunits signature.;gbkey=misc_feature;gene=yscN;inference=protein motif:Prosite:PS00152
AM286416.1	EMBL	gene	19846	20310	.	+	.	ID=gene4198;Name=yscO;gbkey=Gene;gene=yscO;gene_biotype=protein_coding;locus_tag=YEP0025
AM286416.1	EMBL	CDS	19846	20310	.	+	0	ID=cds4084;Parent=gene4198;Dbxref=EnsemblGenomes-Gn:YEP0025,EnsemblGenomes-Tr:CAL10049,InterPro:IPR009929,UniProtKB/TrEMBL:A1JU83,NCBI_GP:CAL10049.1;Name=CAL10049.1;Note=Similar to Yersinia enterocolitica type III secretion system translocation protein YscO SWALL:Q93KT7 (EMBL:AF336309) (154 aa) fasta scores: E(): 9.7e-51%2C 100 id in 154 aa%2C and to Yersinia pseudotuberculosis Yop proteins translocation protein O YscO SWALL:YSCO_YERPS (SWALL:P40294) (154 aa) fasta scores: E(): 3.1e-49%2C 96.75 id in 154 aa;gbkey=CDS;gene=yscO;inference=similar to sequence:UniProtKB:P40294;product=type III secretion system translocation protein;protein_id=CAL10049.1;transl_table=11
AM286416.1	EMBL	gene	20310	21671	.	+	.	ID=gene4199;Name=yscP;gbkey=Gene;gene=yscP;gene_biotype=protein_coding;locus_tag=YEP0026
AM286416.1	EMBL	CDS	20310	21671	.	+	0	ID=cds4085;Parent=gene4199;Dbxref=EnsemblGenomes-Gn:YEP0026,EnsemblGenomes-Tr:CAL10050,GOA:A1JU84,InterPro:IPR013354,InterPro:IPR021136,UniProtKB/TrEMBL:A1JU84,NCBI_GP:CAL10050.1;Name=CAL10050.1;Note=Previously sequenced: Yersinia enterocolitica YscP SWALL:Q93KT6 (EMBL:AF336309) (453 aa) fasta scores: E(): 1.8e-171%2C 100 38d in 453 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis Yop proteins translocation protein P YscP or Ypcd1.42 or Y0039 SWALL:YSCP_YERPE (SWALL:P40295) (455 aa) fasta scores: E(): 2.2e-159%2C 93.84 38d in 455 aa;gbkey=CDS;gene=yscP;inference=similar to sequence:UniProtKB:P40295;product=putative type III secretion protein;protein_id=CAL10050.1;transl_table=11
AM286416.1	EMBL	gene	21668	22591	.	+	.	ID=gene4200;Name=yscQ;gbkey=Gene;gene=yscQ;gene_biotype=protein_coding;locus_tag=YEP0027
AM286416.1	EMBL	CDS	21668	22591	.	+	0	ID=cds4086;Parent=gene4200;Dbxref=EnsemblGenomes-Gn:YEP0027,EnsemblGenomes-Tr:CAL10051,GOA:A1JU85,InterPro:IPR001543,InterPro:IPR003283,InterPro:IPR013385,UniProtKB/TrEMBL:A1JU85,NCBI_GP:CAL10051.1;Name=CAL10051.1;Note=Previously sequenced: Yersinia enterocolitica YscQ SWALL:Q9ZA78 (EMBL:AF102990) (307 aa) fasta scores: E(): 2.9e-123%2C 100 38d in 307 aa. Also highly similar to Yersinia pseudotuberculosis Yop proteins translocation protein Q YscQ SWALL:YSCQ_YERPS (SWALL:P40296) (307 aa) fasta scores: E(): 2.5e-121%2C 98.69 38d in 307 aa%2C and to Yersinia pestis Yop proteins translocation protein Q YscQ or ypcd1.43 or y0038 SWALL:YSCQ_YERPE (SWALL:P42713) (307 aa) fasta scores: E(): 9.4e-121%2C 98.04 38d in 307 aa;gbkey=CDS;gene=yscQ;inference=similar to sequence:UniProtKB:P42713;product=putative type III secretion protein;protein_id=CAL10051.1;transl_table=11
AM286416.1	EMBL	sequence_feature	22352	22582	.	+	.	ID=id7421;Note=Pfam match to entry PF01052 SpoA%2C Surface presentation of antigens (SPOA) protein%2C score 103.1%2CE-value 3.7e-28;gbkey=misc_feature;gene=yscQ;inference=protein motif:PFAM:PF01052
AM286416.1	EMBL	gene	22588	23241	.	+	.	ID=gene4201;Name=yscR;gbkey=Gene;gene=yscR;gene_biotype=protein_coding;locus_tag=YEP0028
AM286416.1	EMBL	CDS	22588	23241	.	+	0	ID=cds4087;Parent=gene4201;Dbxref=EnsemblGenomes-Gn:YEP0028,EnsemblGenomes-Tr:CAL10052,GOA:A1JU86,InterPro:IPR005773,InterPro:IPR005838,UniProtKB/TrEMBL:A1JU86,NCBI_GP:CAL10052.1;Name=CAL10052.1;Note=Previously sequenced: Yersinia enterocolitica YscR SWALL:Q9ZA77 (EMBL:AF102990) (217 aa) fasta scores: E(): 1.6e-80%2C 100 38d in 217 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis Yop proteins translocation protein R YscR or Ypcd1.44 or Y0037 SWALL:YSCR_YERPE (SWALL:P40297) (217 aa) fasta scores: E(): 2.1e-80%2C 99.07 38d in 217 aa%2C and to Pseudomonas aeruginosa translocation protein in type III secretion PscR or pa1693 SWALL:Q9I334 (EMBL:AE004596) (217 aa) fasta scores: E(): 5.2e-66%2C 79.26 38d in 217 aa;gbkey=CDS;gene=yscR;inference=similar to sequence:UniProtKB:P40297;product=putative type III secretion protein;protein_id=CAL10052.1;transl_table=11
AM286416.1	EMBL	sequence_feature	22612	22680	.	+	.	ID=id7422;Note=3 probable transmembrane helices predicted for YEP.32 by TMHMM2.0 at aa 9-31%2C 51-73 and 159-181;gbkey=misc_feature;gene=yscR;inference=protein motif:TMHMM:2.0;is_ordered=true;part=1/3;partial=true
AM286416.1	EMBL	sequence_feature	22738	22806	.	+	.	ID=id7422;Note=3 probable transmembrane helices predicted for YEP.32 by TMHMM2.0 at aa 9-31%2C 51-73 and 159-181;gbkey=misc_feature;gene=yscR;inference=protein motif:TMHMM:2.0;is_ordered=true;part=2/3;partial=true
AM286416.1	EMBL	sequence_feature	23062	23130	.	+	.	ID=id7422;Note=3 probable transmembrane helices predicted for YEP.32 by TMHMM2.0 at aa 9-31%2C 51-73 and 159-181;gbkey=misc_feature;gene=yscR;inference=protein motif:TMHMM:2.0;is_ordered=true;part=3/3;partial=true
AM286416.1	EMBL	sequence_feature	22624	23223	.	+	.	ID=id7423;Note=Pfam match to entry PF00813 FliP%2C FliP family%2C score 460.9%2C E-value 7.6e-136;gbkey=misc_feature;gene=yscR;inference=protein motif:PFAM:PF00813
AM286416.1	EMBL	sequence_feature	23017	23064	.	+	.	ID=id7424;Note=PS01060 Flagella transport protein fliP family signature 1.;gbkey=misc_feature;gene=yscR;inference=protein motif:Prosite:PS01060
AM286416.1	EMBL	sequence_feature	23161	23199	.	+	.	ID=id7425;Note=PS01061 Flagella transport protein fliP family signature 2.;gbkey=misc_feature;gene=yscR;inference=protein motif:Prosite:PS01061
AM286416.1	EMBL	gene	23243	23509	.	+	.	ID=gene4202;Name=yscS;gbkey=Gene;gene=yscS;gene_biotype=protein_coding;locus_tag=YEP0029
AM286416.1	EMBL	CDS	23243	23509	.	+	0	ID=cds4088;Parent=gene4202;Dbxref=EnsemblGenomes-Gn:YEP0029,EnsemblGenomes-Tr:CAL10053,GOA:A1JU87,InterPro:IPR002191,InterPro:IPR006306,UniProtKB/TrEMBL:A1JU87,NCBI_GP:CAL10053.1;Name=CAL10053.1;Note=Previously sequenced: Yersinia enterocolitica YscS SWALL:AAD16829 (EMBL:AF102990) (88 aa) fasta scores: E(): 1.5e-30%2C 100 38d in 88 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis yop proteins translocation protein S YscS or ypcd1.45 or y0036 SWALL:YSCS_YERPE (SWALL:P40298) (88 aa) fasta scores: E(): 1.5e-30%2C 100 38d in 88 aa%2C and to Pseudomonas aeruginosa probable translocation protein in type III secretion Pa1692 SWALL:Q9I335 (EMBL:AE004596) (88 aa) fasta scores: E(): 3.6e-23%2C 75 38d in 88 aa;gbkey=CDS;gene=yscS;inference=similar to sequence:UniProtKB:P40298;product=putative type III secretion protein;protein_id=CAL10053.1;transl_table=11
AM286416.1	EMBL	sequence_feature	23252	23479	.	+	.	ID=id7426;Note=Pfam match to entry PF01313 Bac_export_3%2C Bacterial export proteins%2C family 3%2C score 153.1%2C E-value 3.3e-43;gbkey=misc_feature;gene=yscS;inference=protein motif:PFAM:PF01313
AM286416.1	EMBL	sequence_feature	23279	23347	.	+	.	ID=id7427;Note=2 probable transmembrane helices predicted for YEP.33 by TMHMM2.0 at aa 13-35 and 48-70;gbkey=misc_feature;gene=yscS;inference=protein motif:TMHMM:2.0;is_ordered=true;part=1/2;partial=true
AM286416.1	EMBL	sequence_feature	23384	23452	.	+	.	ID=id7427;Note=2 probable transmembrane helices predicted for YEP.33 by TMHMM2.0 at aa 13-35 and 48-70;gbkey=misc_feature;gene=yscS;inference=protein motif:TMHMM:2.0;is_ordered=true;part=2/2;partial=true
AM286416.1	EMBL	gene	23506	24291	.	+	.	ID=gene4203;Name=yscT;gbkey=Gene;gene=yscT;gene_biotype=protein_coding;locus_tag=YEP0030
AM286416.1	EMBL	CDS	23506	24291	.	+	0	ID=cds4089;Parent=gene4203;Dbxref=EnsemblGenomes-Gn:YEP0030,EnsemblGenomes-Tr:CAL10054,GOA:A1JU88,InterPro:IPR002010,InterPro:IPR006304,UniProtKB/TrEMBL:A1JU88,NCBI_GP:CAL10054.1;Name=CAL10054.1;Note=Previously sequenced: Yersinia enterocolitica YscT SWALL:Q93KT5 (EMBL:AF336309) (261 aa) fasta scores: E(): 3e-95%2C 100 38d in 261 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis yop proteins translocation protein T YscT or Ypcd1.46 or Y0035 SWALL:YSCT_YERPE (SWALL:P40299) (261 aa) fasta scores: E(): 5.2e-94%2C 98.85 38d in 261 aa%2C and to Pseudomonas aeruginosa translocation protein in type III secretion PscT or Pa1691 SWALL:Q9I336 (EMBL:AE004596) (262 aa) fasta scores: E(): 1.9e-65%2C 68.34 38d in 259 aa;gbkey=CDS;gene=yscT;inference=similar to sequence:UniProtKB:P40299;product=putative type III secretion protein;protein_id=CAL10054.1;transl_table=11
AM286416.1	EMBL	sequence_feature	23521	24264	.	+	.	ID=id7428;Note=Pfam match to entry PF01311 Bac_export_1%2C Bacterial export proteins%2C family 1%2C score 381.6%2C E-value 5.7e-112;gbkey=misc_feature;gene=yscT;inference=protein motif:PFAM:PF01311
AM286416.1	EMBL	sequence_feature	23533	23598	.	+	.	ID=id7429;Note=6 probable transmembrane helices predicted for YEP.34 by TMHMM2.0 at aa 10-31%2C 38-57%2C 77-99%2C 132-154%2C180-202 and 214-236;gbkey=misc_feature;gene=yscT;inference=protein motif:TMHMM:2.0;is_ordered=true;part=1/6;partial=true
AM286416.1	EMBL	sequence_feature	23617	23676	.	+	.	ID=id7429;Note=6 probable transmembrane helices predicted for YEP.34 by TMHMM2.0 at aa 10-31%2C 38-57%2C 77-99%2C 132-154%2C180-202 and 214-236;gbkey=misc_feature;gene=yscT;inference=protein motif:TMHMM:2.0;is_ordered=true;part=2/6;partial=true
AM286416.1	EMBL	sequence_feature	23734	23802	.	+	.	ID=id7429;Note=6 probable transmembrane helices predicted for YEP.34 by TMHMM2.0 at aa 10-31%2C 38-57%2C 77-99%2C 132-154%2C180-202 and 214-236;gbkey=misc_feature;gene=yscT;inference=protein motif:TMHMM:2.0;is_ordered=true;part=3/6;partial=true
AM286416.1	EMBL	sequence_feature	23899	23967	.	+	.	ID=id7429;Note=6 probable transmembrane helices predicted for YEP.34 by TMHMM2.0 at aa 10-31%2C 38-57%2C 77-99%2C 132-154%2C180-202 and 214-236;gbkey=misc_feature;gene=yscT;inference=protein motif:TMHMM:2.0;is_ordered=true;part=4/6;partial=true
AM286416.1	EMBL	sequence_feature	24043	24111	.	+	.	ID=id7429;Note=6 probable transmembrane helices predicted for YEP.34 by TMHMM2.0 at aa 10-31%2C 38-57%2C 77-99%2C 132-154%2C180-202 and 214-236;gbkey=misc_feature;gene=yscT;inference=protein motif:TMHMM:2.0;is_ordered=true;part=5/6;partial=true
AM286416.1	EMBL	sequence_feature	24145	24213	.	+	.	ID=id7429;Note=6 probable transmembrane helices predicted for YEP.34 by TMHMM2.0 at aa 10-31%2C 38-57%2C 77-99%2C 132-154%2C180-202 and 214-236;gbkey=misc_feature;gene=yscT;inference=protein motif:TMHMM:2.0;is_ordered=true;part=6/6;partial=true
AM286416.1	EMBL	gene	24291	25355	.	+	.	ID=gene4204;Name=yscU;gbkey=Gene;gene=yscU;gene_biotype=protein_coding;locus_tag=YEP0031
AM286416.1	EMBL	CDS	24291	25355	.	+	0	ID=cds4090;Parent=gene4204;Dbxref=EnsemblGenomes-Gn:YEP0031,EnsemblGenomes-Tr:CAL10055,GOA:A1JU89,InterPro:IPR006135,InterPro:IPR006307,InterPro:IPR029025,UniProtKB/TrEMBL:A1JU89,NCBI_GP:CAL10055.1;Name=CAL10055.1;Note=Previously sequenced: Yersinia enterocolitica YscU SWALL:Q93KT4 (EMBL:AF336309) (354 aa) fasta scores: E(): 2.5e-130%2C 100 38d in 354 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis yop proteins translocation protein U YscU or Ypcd1.47 or Y0034 SWALL:YSCU_YERPE (SWALL:P40300) (354 aa) fasta scores: E(): 3.6e-129%2C 99.15 38d in 354 aa%2C and to Pseudomonas aeruginosa translocation protein in type iii secretion pscu or pa1690 SWALL:Q9I337 (EMBL:AE004596) (349 aa) fasta scores: E(): 6.3e-91%2C 66.85 38d in 347 aa;gbkey=CDS;gene=yscU;inference=similar to sequence:UniProtKB:P40300;product=putative type III secretion protein;protein_id=CAL10055.1;transl_table=11
AM286416.1	EMBL	sequence_feature	24291	25316	.	+	.	ID=id7430;Note=Pfam match to entry PF01312 Bac_export_2%2C FlhB HrpN YscU SpaS Family%2C score 678.1%2C E-value 3.2e-201;gbkey=misc_feature;gene=yscU;inference=protein motif:PFAM:PF01312
AM286416.1	EMBL	sequence_feature	24372	24440	.	+	.	ID=id7431;Note=4 probable transmembrane helices predicted for YEP.35 by TMHMM2.0 at aa 28-50%2C 79-101%2C 136-158 and 186-208;gbkey=misc_feature;gene=yscU;inference=protein motif:TMHMM:2.0;is_ordered=true;part=1/4;partial=true
AM286416.1	EMBL	sequence_feature	24525	24593	.	+	.	ID=id7431;Note=4 probable transmembrane helices predicted for YEP.35 by TMHMM2.0 at aa 28-50%2C 79-101%2C 136-158 and 186-208;gbkey=misc_feature;gene=yscU;inference=protein motif:TMHMM:2.0;is_ordered=true;part=2/4;partial=true
AM286416.1	EMBL	sequence_feature	24696	24764	.	+	.	ID=id7431;Note=4 probable transmembrane helices predicted for YEP.35 by TMHMM2.0 at aa 28-50%2C 79-101%2C 136-158 and 186-208;gbkey=misc_feature;gene=yscU;inference=protein motif:TMHMM:2.0;is_ordered=true;part=3/4;partial=true
AM286416.1	EMBL	sequence_feature	24846	24914	.	+	.	ID=id7431;Note=4 probable transmembrane helices predicted for YEP.35 by TMHMM2.0 at aa 28-50%2C 79-101%2C 136-158 and 186-208;gbkey=misc_feature;gene=yscU;inference=protein motif:TMHMM:2.0;is_ordered=true;part=4/4;partial=true
AM286416.1	EMBL	gene	25931	26326	.	+	.	ID=gene4205;Name=virG;gbkey=Gene;gene=virG;gene_biotype=protein_coding;locus_tag=YEP0033
AM286416.1	EMBL	CDS	25931	26326	.	+	0	ID=cds4091;Parent=gene4205;Dbxref=EnsemblGenomes-Gn:YEP0033,EnsemblGenomes-Tr:CAL10056,InterPro:IPR013400,UniProtKB/TrEMBL:A1JU90,NCBI_GP:CAL10056.1;Name=CAL10056.1;Note=Previously sequenced: Yersinia enterocolitica lipoprotein VirG SWALL:Q56851 (EMBL:AF102990) (131 aa) fasta scores: E(): 3e-51%2C 100 38d in 131 aa. Also highly similar to Yersinia pestis pre-lipoprotein VirG or YscW or Ypcd1.48 SWALL:O68694 (EMBL:AF053946) (131 aa) fasta scores: E(): 3.2e-49%2C 96.18 38d in 131 aa%2C and to Pseudomonas aeruginosa exoenzyme S synthesis protein B ExsB or Pa1712 SWALL:EXSB_PSEAE (SWALL:P26994) (137 aa) fasta scores: E(): 3.1e-06%2C 29.54 38d in 132 aa;gbkey=CDS;gene=virG;inference=similar to sequence:UniProtKB:P26994;product=putative type III secretion effector targeting lipoprotein;protein_id=CAL10056.1;transl_table=11
AM286416.1	EMBL	sequence_feature	25946	25978	.	+	.	ID=id7432;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=virG;inference=protein motif:Prosite:PS00013
AM286416.1	EMBL	gene	26450	27265	.	+	.	ID=gene4206;Name=virF;gbkey=Gene;gene=virF;gene_biotype=protein_coding;locus_tag=YEP0035
AM286416.1	EMBL	CDS	26450	27265	.	+	0	ID=cds4092;Parent=gene4206;Dbxref=EnsemblGenomes-Gn:YEP0035,EnsemblGenomes-Tr:CAL10057,GOA:A1JU91,InterPro:IPR003313,InterPro:IPR009057,InterPro:IPR018060,InterPro:IPR018062,InterPro:IPR020449,NCBI_GP:CAL10057.1;Name=CAL10057.1;Note=Previously sequenced: Yersinia enterocolitica virulence regulon transcriptional activator VirF SWALL:VIRF_YEREN (SWALL:P13225) (271 aa) fasta scores: E(): 9.7e-110%2C 98.52 38d in 271 aa. Also highly similar to Yersinia pestis thermoregulatory protein LcrF or ypcd1.49 or y0032 SWALL:LCRF_YERPE (SWALL:P28808) (271 aa) fasta scores: E(): 1.3e-108%2C 97.78 38d in 271 aa and to Pseudomonas aeruginosa exoenzyme S synthesis regulatory protein ExsA or pa1713 SWALL:EXSA_PSEAE (SWALL:P26993) (278 aa) fasta scores: E(): 1.3e-57%2C 57.41 38d in 263 aa;gbkey=CDS;gene=virF;inference=similar to sequence:UniProtKB:P28808;product=virulence regulon transcriptional activator;protein_id=CAL10057.1;transl_table=11
AM286416.1	EMBL	sequence_feature	26954	27091	.	+	.	ID=id7433;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 33.4%2C E-value 3.7e-07;gbkey=misc_feature;gene=virF;inference=protein motif:PFAM:PF00165
AM286416.1	EMBL	sequence_feature	27098	27226	.	+	.	ID=id7434;Note=PS00041 Bacterial regulatory proteins%2C araC family signature.;gbkey=misc_feature;gene=virF;inference=protein motif:Prosite:PS00041
AM286416.1	EMBL	sequence_feature	27110	27241	.	+	.	ID=id7435;Note=Pfam match to entry PF00165 HTH_AraC%2C Bacterial regulatory helix-turn-helix proteins%2C araC family%2C score 53.8%2C E-value 2.7e-13;gbkey=misc_feature;gene=virF;inference=protein motif:PFAM:PF00165
AM286416.1	EMBL	gene	27345	27443	.	+	.	ID=gene4207;Name=yscA;gbkey=Gene;gene=yscA;gene_biotype=protein_coding;locus_tag=YEP0036
AM286416.1	EMBL	CDS	27345	27443	.	+	0	ID=cds4093;Parent=gene4207;Dbxref=EnsemblGenomes-Gn:YEP0036,EnsemblGenomes-Tr:CAL10058,GOA:A1JU92,NCBI_GP:CAL10058.1;Name=CAL10058.1;Note=doubtful CDS. Previously sequenced: Yersinia enterocolitica yop proteins translocation protein A YscA SWALL:YSCA_YEREN (SWALL:Q01242) (32 aa) fasta scores: E(): 9.5e-14%2C 100 38d in 32 aa;gbkey=CDS;gene=yscA;inference=similar to sequence:UniProtKB:Q01242;product=conserved hypothetical hydrophobic protein;protein_id=CAL10058.1;transl_table=11
AM286416.1	EMBL	sequence_feature	27378	27437	.	+	.	ID=id7436;Note=1 probable transmembrane helix predicted for YEP.40 by TMHMM2.0 at aa 12-31;gbkey=misc_feature;gene=yscA;inference=protein motif:TMHMM:2.0
AM286416.1	EMBL	gene	27668	28081	.	+	.	ID=gene4208;Name=yscB;gbkey=Gene;gene=yscB;gene_biotype=protein_coding;locus_tag=YEP0037
AM286416.1	EMBL	CDS	27668	28081	.	+	0	ID=cds4094;Parent=gene4208;Dbxref=EnsemblGenomes-Gn:YEP0037,EnsemblGenomes-Tr:CAL10059,GOA:A1JU93,InterPro:IPR010261,InterPro:IPR013353,NCBI_GP:CAL10059.1;Name=CAL10059.1;Note=Previously sequenced: Yersinia enterocolitica YscB SWALL:Q93KT2 (EMBL:AF336309) (137 aa) fasta scores: E(): 1.5e-52%2C 100 38d in 137 aa. Also highly similar to Yersinia pestis KIM5 YscB or Ypcd1.51 SWALL:Q56973 (EMBL:M83225) (137 aa) fasta scores: E(): 1.7e-51%2C 97.81 id in 137 aa%2C and to Pseudomonas aeruginosa PscB SWALL:P95430 (EMBL:U56077) (140 aa) fasta scores: E(): 8.4e-16%2C 43.41 38d in 129 aa;gbkey=CDS;gene=yscB;product=conserved hypothetical protein;protein_id=CAL10059.1;transl_table=11
AM286416.1	EMBL	gene	28087	29910	.	+	.	ID=gene4209;Name=yscC;gbkey=Gene;gene=yscC;gene_biotype=protein_coding;locus_tag=YEP0038
AM286416.1	EMBL	CDS	28087	29910	.	+	0	ID=cds4095;Parent=gene4209;Dbxref=EnsemblGenomes-Gn:YEP0038,EnsemblGenomes-Tr:CAL10060,GOA:A1JU94,InterPro:IPR003522,InterPro:IPR004845,InterPro:IPR004846,InterPro:IPR005644,UniProtKB/TrEMBL:A1JU94,NCBI_GP:CAL10060.1;Name=CAL10060.1;Note=Previously sequenced: Yersinia enterocolitica yop proteins translocation protein C precursor YscC SWALL:YSCC_YEREN (SWALL:Q01244) (607 aa) fasta scores: E(): 0%2C 99.17 38d in 607 aa. Also highly similar to Yersinia pestis KIM5 or Yscc or Ypcd1.52 SWALL:Q56974 (EMBL:M83225) (607 aa) fasta scores: E(): 0%2C 98.35 38d in 607 aa%2C and to Pseudomonas aeruginosa type III secretion protein PscC or pa1716 SWALL:Q9I319 (EMBL:AE004598) (600 aa) fasta scores: E(): 2.2e-146%2C 62.74 38d in 604 aa;gbkey=CDS;gene=yscC;inference=similar to sequence:UniProtKB:Q01244;product=putative type III secretion protein;protein_id=CAL10060.1;transl_table=11
AM286416.1	EMBL	sequence_feature	28417	28608	.	+	.	ID=id7437;Note=Pfam match to entry PF03958 GSPII_III_N%2C Bacterial type II/III secretion system short domain%2C score 48.3%2CE-value 1.2e-11;gbkey=misc_feature;gene=yscC;inference=protein motif:PFAM:PF03958
AM286416.1	EMBL	sequence_feature	28636	28929	.	+	.	ID=id7438;Note=Pfam match to entry PF03958 GSPII_III_N%2C Bacterial type II/III secretion system short domain%2C score 110.3%2CE-value 2.7e-30;gbkey=misc_feature;gene=yscC;inference=protein motif:PFAM:PF03958
AM286416.1	EMBL	sequence_feature	28933	29616	.	+	.	ID=id7439;Note=Pfam match to entry PF00263 GSPII_III%2C Bacterial type II and III secretion system protein%2C score 267.5%2CE-value 1.2e-77;gbkey=misc_feature;gene=yscC;inference=protein motif:PFAM:PF00263
AM286416.1	EMBL	sequence_feature	29449	29550	.	+	.	ID=id7440;Note=PS00875 Bacterial type II secretion system protein D signature.;gbkey=misc_feature;gene=yscC;inference=protein motif:Prosite:PS00875
AM286416.1	EMBL	gene	29907	31163	.	+	.	ID=gene4210;Name=yscD;gbkey=Gene;gene=yscD;gene_biotype=protein_coding;locus_tag=YEP0039
AM286416.1	EMBL	CDS	29907	31163	.	+	0	ID=cds4096;Parent=gene4210;Dbxref=EnsemblGenomes-Gn:YEP0039,EnsemblGenomes-Tr:CAL10061,InterPro:IPR000253,InterPro:IPR008984,InterPro:IPR012843,UniProtKB/TrEMBL:A1JU95,NCBI_GP:CAL10061.1;Name=CAL10061.1;Note=Previously sequenced: Yersinia enterocolitica yop proteins translocation protein D YscD SWALL:YSCD_YEREN (SWALL:Q01245) (418 aa) fasta scores: E(): 5.1e-158%2C99.04 38d in 418 aa. Also highly similar to Yersinia pestis kim5 YscD or Ypcd1.53 SWALL:Q56975 (EMBL:M83225) (419 aa) fasta scores: E(): 1.1e-156%2C 98.56 38d in 419 aa and to Pseudomonas aeruginosa PscD SWALL:P95432 (EMBL:U56077) (432 aa) fasta scores: E(): 1.5e-59%2C 44.41 id in 421 aa;gbkey=CDS;gene=yscD;inference=similar to sequence:UniProtKB:Q01245;product=putative type III secretion protein;protein_id=CAL10061.1;transl_table=11
AM286416.1	EMBL	sequence_feature	30276	30344	.	+	.	ID=id7441;Note=1 probable transmembrane helix predicted for YEP.43 by TMHMM2.0 at aa 124-146;gbkey=misc_feature;gene=yscD;inference=protein motif:TMHMM:2.0
AM286416.1	EMBL	gene	31160	31363	.	+	.	ID=gene4211;Name=yscE;gbkey=Gene;gene=yscE;gene_biotype=protein_coding;locus_tag=YEP0040
AM286416.1	EMBL	CDS	31160	31363	.	+	0	ID=cds4097;Parent=gene4211;Dbxref=EnsemblGenomes-Gn:YEP0040,EnsemblGenomes-Tr:CAL10062,GOA:A1JU96,InterPro:IPR012671,UniProtKB/TrEMBL:A1JU96,NCBI_GP:CAL10062.1;Name=CAL10062.1;Note=Previously sequenced: Yersinia enterocolitica putative yop proteins translocation protein E YscE SWALL:YSCE_YEREN (SWALL:Q01246) (66 aa) fasta scores: E(): 3.3e-23%2C 96.97 38d in 66 aa. Also highly similar to Yersinia pestis yop proteins translocation protein E homolog YscE or Ypcd1.54 SWALL:O68692 (EMBL:AF053946) (66 aa) fasta scores: E(): 7.7e-23%2C 93.93 38d in 66 aa%2C and to Pseudomonas aeruginosa PscE SWALL:P95433 (EMBL:U56077) (67 aa) fasta scores: E(): 0.091%2C 27.27 38d in 66 aa;gbkey=CDS;gene=yscE;inference=similar to sequence:UniProtKB:Q01246;product=putative type III secretion protein;protein_id=CAL10062.1;transl_table=11
AM286416.1	EMBL	gene	31360	31623	.	+	.	ID=gene4212;Name=yscF;gbkey=Gene;gene=yscF;gene_biotype=protein_coding;locus_tag=YEP0041
AM286416.1	EMBL	CDS	31360	31623	.	+	0	ID=cds4098;Parent=gene4212;Dbxref=EnsemblGenomes-Gn:YEP0041,EnsemblGenomes-Tr:CAL10063,GOA:A1JU97,InterPro:IPR011841,InterPro:IPR021123,UniProtKB/TrEMBL:A1JU97,NCBI_GP:CAL10063.1;Name=CAL10063.1;Note=Previously sequenced: Yersinia enterocolitica yop proteins translocation protein F YscF SWALL:YSCF_YEREN (SWALL:Q01247) (87 aa) fasta scores: E(): 1.1e-27%2C 94.25 id in 87 aa. Also highly similar to Yersinia pestis yop proteins translocation protein F homolog YscF or ypcd1.55 SWALL:O68691 (EMBL:AF053946) (87 aa) fasta scores: E(): 2.4e-27%2C 93.1 38d in 87 aa%2C and to Pseudomonas aeruginosa PscF or pa1719 SWALL:P95434 (EMBL:U56077) (85 aa) fasta scores: E(): 2.7e-13%2C 68.05 38d in 72 aa;gbkey=CDS;gene=yscF;inference=similar to sequence:UniProtKB:Q01247;product=putative type III secretion protein;protein_id=CAL10063.1;transl_table=11
AM286416.1	EMBL	gene	31625	31972	.	+	.	ID=gene4213;Name=yscG;gbkey=Gene;gene=yscG;gene_biotype=protein_coding;locus_tag=YEP0042
AM286416.1	EMBL	CDS	31625	31972	.	+	0	ID=cds4099;Parent=gene4213;Dbxref=EnsemblGenomes-Gn:YEP0042,EnsemblGenomes-Tr:CAL10064,GOA:A1JU98,InterPro:IPR013348,UniProtKB/TrEMBL:A1JU98,NCBI_GP:CAL10064.1;Name=CAL10064.1;Note=Previously sequenced: Yersinia enterocolitica putative yop proteins translocation protein G YscG SWALL:YSCG_YEREN (SWALL:Q01248) (115 aa) fasta scores: E(): 3.7e-45%2C 96.52 38d in 115 aa. Also highly similar to Yersinia pestis yop proteins translocation protein G homolog YscG or Ypcd1.56 SWALL:O68690 (EMBL:AF053946) (115 aa) fasta scores: E(): 3.5e-44%2C 96.52 38d in 115 aa%2C and to Pseudomonas aeruginosa PscG or Pa1720 SWALL:P95435 (EMBL:U56077) (115 aa) fasta scores: E(): 4.5e-21%2C 55.14 id in 107 aa;gbkey=CDS;gene=yscG;inference=similar to sequence:UniProtKB:Q01248;product=putative type III secretion protein;protein_id=CAL10064.1;transl_table=11
AM286416.1	EMBL	gene	31969	32466	.	+	.	ID=gene4214;Name=yscH;gbkey=Gene;gene=yscH;gene_biotype=protein_coding;locus_tag=YEP0043
AM286416.1	EMBL	CDS	31969	32466	.	+	0	ID=cds4100;Parent=gene4214;Dbxref=EnsemblGenomes-Gn:YEP0043,EnsemblGenomes-Tr:CAL10065,GOA:A1JU99,InterPro:IPR013349,UniProtKB/TrEMBL:A1JU99,NCBI_GP:CAL10065.1;Name=CAL10065.1;Note=Previously sequenced: Yersinia enterocolitica yop proteins translocation protein H YscH SWALL:YSCH_YEREN (SWALL:Q01249) (165 aa) fasta scores: E(): 8.6e-58%2C 98.18 id in 165 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis yop proteins translocation protein H YscH or lcrp or ypcd1.57 or y0024 SWALL:YSCH_YERPE (SWALL:Q00929) (165 aa) fasta scores: E(): 5.7e-56%2C 96.97 38d in 165 aa%2C and to Pseudomonas aeruginosa type III export protein PscH or Pa1721 SWALL:Q9I316 (EMBL:AE004598) (143 aa) fasta scores: E(): 0.0003%2C 36.55 38d in 93 aa;gbkey=CDS;gene=yscH;inference=similar to sequence:UniProtKB:Q01249;product=putative type III secretion protein;protein_id=CAL10065.1;transl_table=11
AM286416.1	EMBL	gene	32467	32814	.	+	.	ID=gene4215;Name=yscI;gbkey=Gene;gene=yscI;gene_biotype=protein_coding;locus_tag=YEP0044
AM286416.1	EMBL	CDS	32467	32814	.	+	0	ID=cds4101;Parent=gene4215;Dbxref=EnsemblGenomes-Gn:YEP0044,EnsemblGenomes-Tr:CAL10066,GOA:A1JUA0,InterPro:IPR012670,InterPro:IPR021123,UniProtKB/TrEMBL:A1JUA0,NCBI_GP:CAL10066.1;Name=CAL10066.1;Note=Previously sequenced: Yersinia enterocolitica yop proteins translocation protein I YscI SWALL:YSCI_YEREN (SWALL:Q01250) (115 aa) fasta scores: E(): 2e-40%2C 99.13 id in 115 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis yop proteins translocation protein I YscI or lcro or ypcd1.58 or y0023 SWALL:YSCI_YERPE (SWALL:Q00933) (115 aa) fasta scores: E(): 2.6e-39%2C 95.65 38d in 115 aa%2C and to Pseudomonas aeruginosa type III export protein PscI or pa1722 SWALL:Q9I315 (EMBL:AE004598) (112 aa) fasta scores: E(): 5e-13%2C 50.46 38d in 107 aa;gbkey=CDS;gene=yscI;inference=similar to sequence:UniProtKB:Q01250;product=putative type III secretion protein;protein_id=CAL10066.1;transl_table=11
AM286416.1	EMBL	gene	32821	33555	.	+	.	ID=gene4216;Name=yscJ;gbkey=Gene;gene=yscJ;gene_biotype=protein_coding;locus_tag=YEP0045
AM286416.1	EMBL	CDS	32821	33555	.	+	0	ID=cds4102;Parent=gene4216;Dbxref=EnsemblGenomes-Gn:YEP0045,EnsemblGenomes-Tr:CAL10067,GOA:A1JUA1,InterPro:IPR003282,InterPro:IPR006182,UniProtKB/TrEMBL:A1JUA1,NCBI_GP:CAL10067.1;Name=CAL10067.1;Note=Previously sequenced: Yersinia enterocolitica yop proteins translocation lipoprotein J precursor YscJ or YlpB SWALL:YSCJ_YEREN (SWALL:Q01251) (244 aa) fasta scores: E(): 4.9e-87%2C 100 38d in 244 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis yop proteins translocation lipoprotein J precursor YscJ or YlpB or LcrkA or Ypcd1.59 or y0022 SWALL:YSCJ_YERPE (SWALL:Q00926) (244 aa) fasta scores: E(): 1.3e-86%2C 99.59 38d in 244 aa%2C and to Pseudomonas aeruginosa type iii export protein PscJ or pa1723 SWALL:Q9I314 (EMBL:AE004598) (248 aa) fasta scores: E(): 1.5e-62%2C 71.54 38d in 239 aa;gbkey=CDS;gene=yscJ;inference=similar to sequence:UniProtKB:Q01251;product=type III secretion lipoprotein;protein_id=CAL10067.1;transl_table=11
AM286416.1	EMBL	sequence_feature	32821	33405	.	+	.	ID=id7442;Note=Pfam match to entry PF01514 YscJ_FliF%2C Secretory protein of YscJ/FliF family%2C score 335.3%2C E-value 4.9e-98;gbkey=misc_feature;gene=yscJ;inference=protein motif:PFAM:PF01514
AM286416.1	EMBL	sequence_feature	32845	32877	.	+	.	ID=id7443;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yscJ;inference=protein motif:Prosite:PS00013
AM286416.1	EMBL	sequence_feature	33472	33540	.	+	.	ID=id7444;Note=1 probable transmembrane helix predicted for YEP.49 by TMHMM2.0 at aa 218-240;gbkey=misc_feature;gene=yscJ;inference=protein motif:TMHMM:2.0
AM286416.1	EMBL	gene	33555	34184	.	+	.	ID=gene4217;Name=yscK;gbkey=Gene;gene=yscK;gene_biotype=protein_coding;locus_tag=YEP0046
AM286416.1	EMBL	CDS	33555	34184	.	+	0	ID=cds4103;Parent=gene4217;Dbxref=EnsemblGenomes-Gn:YEP0046,EnsemblGenomes-Tr:CAL10068,GOA:A1JUA2,InterPro:IPR009510,UniProtKB/TrEMBL:A1JUA2,NCBI_GP:CAL10068.1;Name=CAL10068.1;Note=Previously sequenced:Yersinia enterocolitica yop proteins translocation protein K YscK SWALL:YSCK_YEREN (SWALL:Q01252) (209 aa) fasta scores: E(): 2.7e-86%2C 99.52 id in 209 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis yop proteins translocation protein k ysck or lcrkb or ypcd1.60 or y0021 SWALL:YSCK_YERPE (SWALL:Q00927) (209 aa) fasta scores: E(): 2.4e-86%2C 99.52 38d in 209 aa%2C and to Pseudomonas aeruginosa type iii export protein PscK or Pa1724 SWALL:Q9I313 (EMBL:AE004598) (208 aa) fasta scores: E(): 4.6e-27%2C 40.97 38d in 205 aa;gbkey=CDS;gene=yscK;inference=similar to sequence:UniProtKB:Q01252;product=type III secretion protein;protein_id=CAL10068.1;transl_table=11
AM286416.1	EMBL	gene	34130	34801	.	+	.	ID=gene4218;Name=yscL;gbkey=Gene;gene=yscL;gene_biotype=protein_coding;locus_tag=YEP0047
AM286416.1	EMBL	CDS	34130	34801	.	+	0	ID=cds4104;Parent=gene4218;Dbxref=EnsemblGenomes-Gn:YEP0047,EnsemblGenomes-Tr:CAL10069,InterPro:IPR012842,InterPro:IPR018035,UniProtKB/TrEMBL:A1JUA3,NCBI_GP:CAL10069.1;Name=CAL10069.1;Note=Previously sequenced as: Yersinia enterocolitica yop proteins translocation protein L YscL SWALL:YSCL_YEREN (SWALL:Q01253) (223 aa) fasta scores: E(): 5.2e-75%2C 98.65 id in 223 aa. Also highly similar to Pseudomonas aeruginosa type III export protein PscL or pa1725 SWALL:Q9I312 (EMBL:AE004598) (214 aa) fasta scores: E(): 1.4e-38%2C 56.58 38d in 205 aa;gbkey=CDS;gene=yscL;inference=similar to sequence:UniProtKB:Q01253;product=putative type III secretion protein;protein_id=CAL10069.1;transl_table=11
AM286416.1	EMBL	sequence_feature	34178	34210	.	+	.	ID=id7445;Note=PS00013 Prokaryotic membrane lipoprotein lipid attachment site.;gbkey=misc_feature;gene=yscL;inference=protein motif:Prosite:PS00013
AM286416.1	EMBL	gene	35020	35367	.	+	.	ID=gene4219;Name=yscM;gbkey=Gene;gene=yscM;gene_biotype=protein_coding;locus_tag=YEP0048
AM286416.1	EMBL	CDS	35020	35367	.	+	0	ID=cds4105;Parent=gene4219;Dbxref=EnsemblGenomes-Gn:YEP0048,EnsemblGenomes-Tr:CAL10070,GOA:A1JUA4,InterPro:IPR015103,UniProtKB/TrEMBL:A1JUA4,NCBI_GP:CAL10070.1;Name=CAL10070.1;Note=Previously sequenced as: Yersinia enterocolitica yop proteins translocation protein M YscM SWALL:YSCM_YEREN (SWALL:Q01254) (115 aa) fasta scores: E(): 1.8e-41%2C 100 id in 115 aa%2C and to Yersinia pestis%2C and Yersinia pseudotuberculosis yop proteins translocation protein m yscm or lcrq or ypcd1.62 or y0019 SWALL:YSCM_YERPE (SWALL:Q00930) (115 aa) fasta scores: E(): 3.3e-41%2C 99.13 id in 115 aa;gbkey=CDS;gene=yscM;inference=similar to sequence:UniProtKB:Q01254;product=putative type III secretion regulatory protein;protein_id=CAL10070.1;transl_table=11
AM286416.1	EMBL	gene	35593	35760	.	+	.	ID=gene4220;Name=YEP0049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0049
AM286416.1	EMBL	CDS	35593	35760	.	+	0	ID=cds4106;Parent=gene4220;Dbxref=EnsemblGenomes-Gn:YEP0049,EnsemblGenomes-Tr:CAL10071,UniProtKB/TrEMBL:A1JUA5,NCBI_GP:CAL10071.1;Name=CAL10071.1;Note=doubtful CDS with no significant database hits;gbkey=CDS;product=hypothetical protein;protein_id=CAL10071.1;transl_table=11
AM286416.1	EMBL	sequence_feature	35617	35676	.	+	.	ID=id7446;Note=1 probable transmembrane helix predicted for YEP.53 by TMHMM2.0 at aa 9-28;gbkey=misc_feature;inference=protein motif:TMHMM:2.0
AM286416.1	EMBL	gene	36049	37455	.	+	.	ID=gene4221;Name=YEP0050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0050
AM286416.1	EMBL	CDS	36049	37455	.	+	0	ID=cds4107;Parent=gene4221;Dbxref=EnsemblGenomes-Gn:YEP0050,EnsemblGenomes-Tr:CAL10072,GOA:A1JUA6,InterPro:IPR000242,InterPro:IPR000387,InterPro:IPR003546,InterPro:IPR015103,InterPro:IPR016130,InterPro:IPR029021,UniProtKB/TrEMBL:A1JUA6,NCBI_GP:CAL10072.1;Name=CAL10072.1;gbkey=CDS;product=putative protein-tyrosine phosphatase Yop effector;protein_id=CAL10072.1;transl_table=11
AM286416.1	EMBL	sequence_feature	36715	37428	.	+	.	ID=id7447;Note=Pfam match to entry PF00102 Y_phosphatase%2CProtein-tyrosine phosphatase%2C score 137.2%2C E-value 2.1e-38;gbkey=misc_feature;inference=protein motif:PFAM:PF00102
AM286416.1	EMBL	sequence_feature	37249	37287	.	+	.	ID=id7448;Note=PS00383 Tyrosine specific protein phosphatases active site.;gbkey=misc_feature;inference=protein motif:Prosite:PS00383
AM286416.1	EMBL	gene	37677	38108	.	-	.	ID=gene4222;Name=YEP0051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0051
AM286416.1	EMBL	CDS	37677	38108	.	-	0	ID=cds4108;Parent=gene4222;Dbxref=EnsemblGenomes-Gn:YEP0051,EnsemblGenomes-Tr:CAL10073,GOA:A1JUA7,InterPro:IPR010261,UniProtKB/TrEMBL:A1JUA7,NCBI_GP:CAL10073.1;Name=CAL10073.1;gbkey=CDS;product=putative yopH targeting protein;protein_id=CAL10073.1;transl_table=11
AM286416.1	EMBL	gene	38462	38854	.	-	.	ID=gene4223;Name=YEP0052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0052
AM286416.1	EMBL	CDS	38462	38854	.	-	0	ID=cds4109;Parent=gene4223;Dbxref=EnsemblGenomes-Gn:YEP0052,EnsemblGenomes-Tr:CAL10074,GOA:P31490,InterPro:IPR005416,InterPro:IPR010261,PDB:1N5B,NCBI_GP:CAL10074.1;Name=CAL10074.1;gbkey=CDS;product=putative YopE chaperone;protein_id=CAL10074.1;transl_table=11
AM286416.1	EMBL	gene	39047	39706	.	+	.	ID=gene4224;Name=YEP0053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0053
AM286416.1	EMBL	CDS	39047	39706	.	+	0	ID=cds4110;Parent=gene4224;Dbxref=EnsemblGenomes-Gn:YEP0053,EnsemblGenomes-Tr:CAL10075,GOA:A1JUA9,InterPro:IPR003537,InterPro:IPR014773,InterPro:IPR015110,UniProtKB/TrEMBL:A1JUA9,NCBI_GP:CAL10075.1;Name=CAL10075.1;gbkey=CDS;product=putative outer membrane virulence protein;protein_id=CAL10075.1;transl_table=11
AM286416.1	EMBL	sequence_feature	39425	39631	.	+	.	ID=id7449;Note=Pfam match to entry PF03545 Yers_vir_YopE%2C Yersinia virulence determinant (YopE)%2C score 161.3%2C E-value 1.2e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF03545
AM286416.1	EMBL	repeat_region	39712	40187	.	-	.	ID=id7450;Note=label:'IS1669%3B~Partial sequemce of insertion sequence element IS1669;gbkey=repeat_region
AM286416.1	EMBL	pseudogene	39747	40172	.	-	.	ID=gene4225;Name=YEP0054;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0054;pseudo=true
AM286416.1	EMBL	CDS	39747	40172	.	-	0	ID=cds4111;Parent=gene4225;Note=Similar to parts of many transposases including: Yersinia pestis putative integrase core domain protein ypo2009 SWALL:Q8ZEY7 (EMBL:AJ414151) (169 aa) fasta scores: E(): 1.9e-51%2C 92.9 38d in 141 aa and to Porphyromonas gingivalis transposase SWALL:Q9L796 (EMBL:AF224744) (312 aa) fasta scores: E(): 8e-13%2C 41.54 id in 142 aa%2C and to Corynebacterium diphtheriae transposase subunit b tnpB SWALL:Q8RMK1 (EMBL:AF492560) (306 aa) fasta scores: E(): 1.5e-12%2C 39.16 38d in 143 aa. Note this CDS appears to be a gene remnant lacking its 5' end;gbkey=CDS;product=putative transposase for insertion element IS1669 (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	sequence_feature	39756	40085	.	-	.	ID=id7451;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 75.2%2C E-value 1.2e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286416.1	EMBL	pseudogene	40240	40794	.	-	.	ID=gene4226;Name=YEP0055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0055;pseudo=true
AM286416.1	EMBL	CDS	40240	40794	.	-	0	ID=cds4112;Parent=gene4226;Note=Similar to the very C-termini of many putative reverse transcriptase-like proteins including: Escherichia coli Orf59 protein SWALL:Q9S109 (EMBL:AB024946) (502 aa) fasta scores: E(): 2.4e-73%2C 93.47 38d in 184 aa and Shigella flexneri reverse transcriptase-like protein SfiA SWALL:O34211 (EMBL:U97489) (431 aa) fasta scores: E(): 1.4e-36%2C 94.11 38d in 102 aa. Note this CDS appears to be a gene remnant lacking it 5' end.;gbkey=CDS;product=conserved hypothetical protein (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	repeat_region	40786	40999	.	-	.	ID=id7452;Note=label:IS1669'%3B~Partial sequence of insertion sequence element IS1669;gbkey=repeat_region
AM286416.1	EMBL	pseudogene	40794	40943	.	-	.	ID=gene4227;Name=YEP0056;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0056;pseudo=true
AM286416.1	EMBL	CDS	40794	40943	.	-	0	ID=cds4113;Parent=gene4227;Note=Similar to the very C-termini of many including: Salmonella typhimurium putative cytoplasmic protein Stm0948 SWALL:Q8ZQE1 (EMBL:AE008740) (133 aa) fasta scores: E(): 7.9e-15%2C 82 38d in 50 aa%2C Shewanella oneidensis hypothetical protein Soa0117 SWALL:AAN53040 (EMBL:AE015918) (80 aa) fasta scores: E(): 4.5e-10%2C 64 38d in 50 aa and to Vibrio cholerae transposase subunit A vc1477 SWALL:Q9KS05 (EMBL:AE004225) (117 aa) fasta scores: E(): 2.3%2C 30 38d in 50 aa;gbkey=CDS;product=IS1669 conserved hypothetical protein (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	sequence_feature	41015	41068	.	+	.	ID=id7453;Note=2 probable transmembrane helices predicted for YEP.60 by TMHMM2.0 at aa 7-24 and 39-61;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;is_ordered=true;part=1/2;partial=true
AM286416.1	EMBL	sequence_feature	41111	41179	.	+	.	ID=id7453;Note=2 probable transmembrane helices predicted for YEP.60 by TMHMM2.0 at aa 7-24 and 39-61;gbkey=misc_feature;inference=protein motif:TMHMM:2.0;is_ordered=true;part=2/2;partial=true
AM286416.1	EMBL	gene	41132	41434	.	-	.	ID=gene4228;Name=YEP0057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0057
AM286416.1	EMBL	CDS	41132	41434	.	-	0	ID=cds4114;Parent=gene4228;Dbxref=EnsemblGenomes-Gn:YEP0057,EnsemblGenomes-Tr:CAL10079,InterPro:IPR007712,InterPro:IPR028344,UniProtKB/TrEMBL:A1JUB0,NCBI_GP:CAL10079.1;Name=CAL10079.1;Note=Previously sequenced as: Yersinia enterocolitica hypothetical 11.8 kDa protein SWALL:Q93KR9 (EMBL:AF336309) (100 aa) fasta scores: E(): 1.7e-40%2C 100 38d in 100 aa. Also highly similar to Yersinia pestis hypothetical protein y0075 or ypcd1.08C SWALL:Q9ZGW2 (EMBL:AF074612) (99 aa) fasta scores: E(): 3.2e-38%2C 95.96 38d in 99 aa and to Escherichia coli O157:H7 hypothetical protein z0510 z0510 or ecs0462 SWALL:Q8XE95 (EMBL:AE005220) (93 aa) fasta scores: E(): 5.8e-07%2C 35.95 38d in 89 aa;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10079.1;transl_table=11
AM286416.1	EMBL	gene	41427	41669	.	-	.	ID=gene4229;Name=YEP0058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0058
AM286416.1	EMBL	CDS	41427	41669	.	-	0	ID=cds4115;Parent=gene4229;Dbxref=EnsemblGenomes-Gn:YEP0058,EnsemblGenomes-Tr:CAL10080,GOA:A1JUB1,InterPro:IPR005360,InterPro:IPR010985,InterPro:IPR013321,InterPro:IPR022789,NCBI_GP:CAL10080.1;Name=CAL10080.1;Note=Previously sequenced as: Yersinia enterocolitica hypothetical 8.9 kDa protein SWALL:Y6A9_YEREN (SWALL:O85269) (80 aa) fasta scores: E(): 1.8e-28%2C 100 38d in 80 aa. Also highly similar to Yersinia pestis hypothetical protein ypcd1.09c or y0074 SWALL:Y6A9_YERPE (SWALL:Q9ZGW3) (80 aa) fasta scores: E(): 1.2e-27%2C 97.5 id in 80 aa and to Vibrio cholerae hypothetical protein Vca0360.1 SWALL:YV6A_VIBCH (SWALL:P58093) (80 aa) fasta scores: E(): 1.2e-08%2C 54.38 38d in 57 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:Q9ZGW3;product=conserved hypothetical protein;protein_id=CAL10080.1;transl_table=11
AM286416.1	EMBL	sequence_feature	41442	41669	.	-	.	ID=id7454;Note=Pfam match to entry PF03693 UPF0156%2CUncharacterised protein family (UPF0156)%2C score 66.8%2CE-value 3.2e-17;gbkey=misc_feature;inference=protein motif:PFAM:PF03693
AM286416.1	EMBL	pseudogene	41813	42133	.	-	.	ID=gene4230;Name=YEP0059;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0059;pseudo=true
AM286416.1	EMBL	CDS	41813	42133	.	-	0	ID=cds4116;Parent=gene4230;Dbxref=PSEUDO:CAL10081.1;Note=Similar in parts to many putative transposases including: Yersinia pestis Ypcd1.10C protein SWALL:Q9RI25 (EMBL:AL117189) (83 aa) fasta scores: E(): 3.2e-33%2C 92.77 id in 83 aa%2C Pantoea agglomerans IS1327 transposase TnpA SWALL:P94785 (EMBL:X87144) (234 aa) fasta scores: E(): 2.4e-22%2C 66.66 38d in 90 aa and to Xylella fastidiosa transposase xf2303 SWALL:Q9PB42 (EMBL:AE004042) (188 aa) fasta scores: E(): 9.5e-20%2C 63.95 38d in 86 aa;gbkey=CDS;product=putative transposase (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	repeat_region	42548	42592	.	+	.	ID=id7455;gbkey=repeat_region;rpt_unit_seq=tggatatccaatgccaacgttggtaattgggaccacggtcccacc
AM286416.1	EMBL	repeat_region	42593	42637	.	+	.	ID=id7456;gbkey=repeat_region;rpt_unit_seq=tggatatccaatgccaacgttggtaattgggaccacggtcccacc
AM286416.1	EMBL	repeat_region	42638	42682	.	+	.	ID=id7457;gbkey=repeat_region;rpt_unit_seq=tggatatccaatgccaacgttggtaattgggaccacggtcccacc
AM286416.1	EMBL	repeat_region	42683	42727	.	+	.	ID=id7458;gbkey=repeat_region;rpt_unit_seq=tggatatccaatgccaacgttggtaattgggaccacggtcccacc
AM286416.1	EMBL	repeat_region	42728	42772	.	+	.	ID=id7459;gbkey=repeat_region;rpt_unit_seq=tggatatccaatgccaacgttggtaattgggaccacggtcccacc
AM286416.1	EMBL	repeat_region	42773	42808	.	+	.	ID=id7460;gbkey=repeat_region;rpt_unit_seq=tggatatccaatgccaacgttggtaattgggaccacggtcccacc
AM286416.1	EMBL	gene	42931	43893	.	-	.	ID=gene4231;Name=YEP0061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0061
AM286416.1	EMBL	CDS	42931	43893	.	-	0	ID=cds4117;Parent=gene4231;Dbxref=EnsemblGenomes-Gn:YEP0061,EnsemblGenomes-Tr:CAL10082,GOA:A1JUB3,InterPro:IPR003115,InterPro:IPR004437,UniProtKB/TrEMBL:A1JUB3,NCBI_GP:CAL10082.1;Name=CAL10082.1;gbkey=CDS;product=putative plasmid partitioning control protein;protein_id=CAL10082.1;transl_table=11
AM286416.1	EMBL	sequence_feature	43423	43686	.	-	.	ID=id7461;Note=Pfam match to entry PF02195 ParBc%2C ParB-like nuclease domain%2C score 57.9%2C E-value 1.5e-14;gbkey=misc_feature;inference=protein motif:PFAM:PF02195
AM286416.1	EMBL	gene	43893	45059	.	-	.	ID=gene4232;Name=YEP0062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0062
AM286416.1	EMBL	CDS	43893	45059	.	-	0	ID=cds4118;Parent=gene4232;Dbxref=EnsemblGenomes-Gn:YEP0062,EnsemblGenomes-Tr:CAL10083,GOA:A1JUB4,InterPro:IPR000551,InterPro:IPR002586,InterPro:IPR009061,InterPro:IPR027417,UniProtKB/TrEMBL:A1JUB4,NCBI_GP:CAL10083.1;Name=CAL10083.1;gbkey=CDS;product=putative plasmid partitioning transcription repressor;protein_id=CAL10083.1;transl_table=11
AM286416.1	EMBL	sequence_feature	44118	44456	.	-	.	ID=id7462;Note=Pfam match to entry PF00991 ParA%2C ParA family ATPase%2C score 79.9%2C E-value 3.8e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00991
AM286416.1	EMBL	sequence_feature	44832	44939	.	-	.	ID=id7463;Note=Pfam match to entry PF00376 merR%2C MerR family regulatory protein%2C score 19.6%2C E-value 0.00037;gbkey=misc_feature;inference=protein motif:PFAM:PF00376
AM286416.1	EMBL	gene	45373	45588	.	-	.	ID=gene4233;Name=YEP0063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0063
AM286416.1	EMBL	CDS	45373	45588	.	-	0	ID=cds4119;Parent=gene4233;Dbxref=EnsemblGenomes-Gn:YEP0063,EnsemblGenomes-Tr:CAL10084,UniProtKB/TrEMBL:A1JUB5,NCBI_GP:CAL10084.1;Name=CAL10084.1;Note=Similar to Yersinia enterocolitica hypothetical 7.7 kDa protein SWALL:Q93KR6 (EMBL:AF336309) (71 aa) fasta scores: E(): 4.5e-26%2C 97.18 38d in 71 aa;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10084.1;transl_table=11
AM286416.1	EMBL	pseudogene	45764	45856	.	-	.	ID=gene4234;Name=YEP0064;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0064;pseudo=true
AM286416.1	EMBL	CDS	45764	45856	.	-	0	ID=cds4120;Parent=gene4234;Note=Similar to the N-terminus of many transposases e.g. Desulfovibrio vulgaris transposase OrfA SWALL:O31217 (EMBL:AF034211) (88 aa) fasta scores: E(): 7.1e-06%2C 61.29 id in 31 aa. This CDS appears to be a gene remnant;gbkey=CDS;product=putative transposase (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	gene	46109	46984	.	-	.	ID=gene4235;Name=yomA;gbkey=Gene;gene=yomA;gene_biotype=protein_coding;locus_tag=YEP0065
AM286416.1	EMBL	CDS	46109	46984	.	-	0	ID=cds4121;Parent=gene4235;Dbxref=EnsemblGenomes-Gn:YEP0065,EnsemblGenomes-Tr:CAL10086,GOA:A1JUB6,InterPro:IPR000620,UniProtKB/TrEMBL:A1JUB6,NCBI_GP:CAL10086.1;Name=CAL10086.1;Note=Previously sequenced as: Yersinia enterocolitica YomA SWALL:Q93KR5 (EMBL:AF336309) (291 aa) fasta scores: E(): 7.8e-105%2C 100 38d in 291 aa. Also highly similar to Salmonella typhimurium integral membrane protein PagO or stm1862 SWALL:PAGO_SALTY (SWALL:O30646) (304 aa) fasta scores: E(): 1.7e-62%2C 57.39 38d in 284 aa;gbkey=CDS;gene=yomA;inference=similar to sequence:UniProtKB:O30646;product=putative exported protein;protein_id=CAL10086.1;transl_table=11
AM286416.1	EMBL	sequence_feature	46907	46966	.	-	.	ID=id7464;Note=10 probable transmembrane helices predicted for YEP.69c by TMHMM2.0 at aa 7-26%2C 36-56%2C 69-88%2C 92-114%2C121-142%2C 152-169%2C 181-203%2C 213-235%2C 242-264 and 268-290;gbkey=misc_feature;gene=yomA;inference=protein motif:TMHMM:2.0;is_ordered=true;part=1/10;partial=true
AM286416.1	EMBL	sequence_feature	46817	46879	.	-	.	ID=id7464;Note=10 probable transmembrane helices predicted for YEP.69c by TMHMM2.0 at aa 7-26%2C 36-56%2C 69-88%2C 92-114%2C121-142%2C 152-169%2C 181-203%2C 213-235%2C 242-264 and 268-290;gbkey=misc_feature;gene=yomA;inference=protein motif:TMHMM:2.0;is_ordered=true;part=2/10;partial=true
AM286416.1	EMBL	sequence_feature	46721	46780	.	-	.	ID=id7464;Note=10 probable transmembrane helices predicted for YEP.69c by TMHMM2.0 at aa 7-26%2C 36-56%2C 69-88%2C 92-114%2C121-142%2C 152-169%2C 181-203%2C 213-235%2C 242-264 and 268-290;gbkey=misc_feature;gene=yomA;inference=protein motif:TMHMM:2.0;is_ordered=true;part=3/10;partial=true
AM286416.1	EMBL	sequence_feature	46643	46711	.	-	.	ID=id7464;Note=10 probable transmembrane helices predicted for YEP.69c by TMHMM2.0 at aa 7-26%2C 36-56%2C 69-88%2C 92-114%2C121-142%2C 152-169%2C 181-203%2C 213-235%2C 242-264 and 268-290;gbkey=misc_feature;gene=yomA;inference=protein motif:TMHMM:2.0;is_ordered=true;part=4/10;partial=true
AM286416.1	EMBL	sequence_feature	46559	46624	.	-	.	ID=id7464;Note=10 probable transmembrane helices predicted for YEP.69c by TMHMM2.0 at aa 7-26%2C 36-56%2C 69-88%2C 92-114%2C121-142%2C 152-169%2C 181-203%2C 213-235%2C 242-264 and 268-290;gbkey=misc_feature;gene=yomA;inference=protein motif:TMHMM:2.0;is_ordered=true;part=5/10;partial=true
AM286416.1	EMBL	sequence_feature	46478	46531	.	-	.	ID=id7464;Note=10 probable transmembrane helices predicted for YEP.69c by TMHMM2.0 at aa 7-26%2C 36-56%2C 69-88%2C 92-114%2C121-142%2C 152-169%2C 181-203%2C 213-235%2C 242-264 and 268-290;gbkey=misc_feature;gene=yomA;inference=protein motif:TMHMM:2.0;is_ordered=true;part=6/10;partial=true
AM286416.1	EMBL	sequence_feature	46376	46444	.	-	.	ID=id7464;Note=10 probable transmembrane helices predicted for YEP.69c by TMHMM2.0 at aa 7-26%2C 36-56%2C 69-88%2C 92-114%2C121-142%2C 152-169%2C 181-203%2C 213-235%2C 242-264 and 268-290;gbkey=misc_feature;gene=yomA;inference=protein motif:TMHMM:2.0;is_ordered=true;part=7/10;partial=true
AM286416.1	EMBL	sequence_feature	46280	46348	.	-	.	ID=id7464;Note=10 probable transmembrane helices predicted for YEP.69c by TMHMM2.0 at aa 7-26%2C 36-56%2C 69-88%2C 92-114%2C121-142%2C 152-169%2C 181-203%2C 213-235%2C 242-264 and 268-290;gbkey=misc_feature;gene=yomA;inference=protein motif:TMHMM:2.0;is_ordered=true;part=8/10;partial=true
AM286416.1	EMBL	sequence_feature	46193	46261	.	-	.	ID=id7464;Note=10 probable transmembrane helices predicted for YEP.69c by TMHMM2.0 at aa 7-26%2C 36-56%2C 69-88%2C 92-114%2C121-142%2C 152-169%2C 181-203%2C 213-235%2C 242-264 and 268-290;gbkey=misc_feature;gene=yomA;inference=protein motif:TMHMM:2.0;is_ordered=true;part=9/10;partial=true
AM286416.1	EMBL	sequence_feature	46115	46183	.	-	.	ID=id7464;Note=10 probable transmembrane helices predicted for YEP.69c by TMHMM2.0 at aa 7-26%2C 36-56%2C 69-88%2C 92-114%2C121-142%2C 152-169%2C 181-203%2C 213-235%2C 242-264 and 268-290;gbkey=misc_feature;gene=yomA;inference=protein motif:TMHMM:2.0;is_ordered=true;part=10/10;partial=true
AM286416.1	EMBL	sequence_feature	46118	46498	.	-	.	ID=id7465;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 99.1%2C E-value 6.2e-27;gbkey=misc_feature;gene=yomA;inference=protein motif:PFAM:PF00892
AM286416.1	EMBL	sequence_feature	46562	46936	.	-	.	ID=id7466;Note=Pfam match to entry PF00892 DUF6%2C Integral membrane protein DUF6%2C score 108.9%2C E-value 6.7e-30;gbkey=misc_feature;gene=yomA;inference=protein motif:PFAM:PF00892
AM286416.1	EMBL	gene	47054	48322	.	-	.	ID=gene4236;Name=YEP0066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0066
AM286416.1	EMBL	CDS	47054	48322	.	-	0	ID=cds4122;Parent=gene4236;Dbxref=EnsemblGenomes-Gn:YEP0066,EnsemblGenomes-Tr:CAL10087,GOA:A1JUB7,InterPro:IPR005594,InterPro:IPR008126,InterPro:IPR008635,InterPro:IPR008640,InterPro:IPR011049,PDB:2LME,NCBI_GP:CAL10087.1;Name=CAL10087.1;gbkey=CDS;product=putative YadA invasin;protein_id=CAL10087.1;transl_table=11
AM286416.1	EMBL	sequence_feature	47057	47290	.	-	.	ID=id7467;Note=Pfam match to entry PF03895 YadA%2C YadA-like C-terminal region%2C score 145.1%2C E-value 8.8e-41;gbkey=misc_feature;inference=protein motif:PFAM:PF03895
AM286416.1	EMBL	repeat_region	48835	49479	.	+	.	ID=id7468;Note=label:'IS1400'%3B~degenerate insertion sequence element IS1400;gbkey=repeat_region
AM286416.1	EMBL	pseudogene	48870	48902	.	+	.	ID=gene4237;Name=trp1400A;gbkey=Gene;gene=trp1400A;gene_biotype=pseudogene;is_ordered=true;locus_tag=YEP0067;part=1/2;pseudo=true
AM286416.1	EMBL	pseudogene	48906	48923	.	+	.	ID=gene4237;Name=trp1400A;gbkey=Gene;gene=trp1400A;gene_biotype=pseudogene;is_ordered=true;locus_tag=YEP0067;part=2/2;pseudo=true
AM286416.1	EMBL	CDS	48870	48902	.	+	0	ID=cds4123;Parent=gene4237;Note=Similar to the very N-terminus of Yersinia enterocolitica IS1400 transposase A trp1400A SWALL:Q9X9H8 (EMBL:AJ132945) (96 aa) fasta scores: E(): 0.0089%2C 61.11 id in 18 aa%2C and to Escherichia coli O6 transposase c2472 SWALL:AAN80931 (EMBL:AE016762) (88 aa) fasta scores: E(): 0.052%2C 81.81 38d in 11 aa;gbkey=CDS;gene=trp1400A;product=IS1400 transposase A (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	CDS	48906	48923	.	+	0	ID=cds4123;Parent=gene4237;Note=Similar to the very N-terminus of Yersinia enterocolitica IS1400 transposase A trp1400A SWALL:Q9X9H8 (EMBL:AJ132945) (96 aa) fasta scores: E(): 0.0089%2C 61.11 id in 18 aa%2C and to Escherichia coli O6 transposase c2472 SWALL:AAN80931 (EMBL:AE016762) (88 aa) fasta scores: E(): 0.052%2C 81.81 38d in 11 aa;gbkey=CDS;gene=trp1400A;product=IS1400 transposase A (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	pseudogene	48925	49317	.	+	.	ID=gene4238;Name=trp1400B;gbkey=Gene;gene=trp1400B;gene_biotype=pseudogene;is_ordered=true;locus_tag=YEP0068;part=1/2;pseudo=true
AM286416.1	EMBL	pseudogene	49321	49479	.	+	.	ID=gene4238;Name=trp1400B;gbkey=Gene;gene=trp1400B;gene_biotype=pseudogene;is_ordered=true;locus_tag=YEP0068;part=2/2;pseudo=true
AM286416.1	EMBL	CDS	48925	49317	.	+	0	ID=cds4124;Parent=gene4238;Note=Similar in parts to many transposases including: Yersinia enterocolitica IS1400 transposase B trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 9.1e-20%2C 76.04 38d in 192 aa and to Xanthomonas campestris ISxcc1 transposase xcc3124 or xcc3135 SWALL:Q8NL31 (EMBL:AE012428) (255 aa) fasta scores: E(): 3.4e-14%2C56.18 38d in 194 aa. Note this CDS appears to be a gene remnant that has undergone a series of deletion events;gbkey=CDS;gene=trp1400B;product=putative IS1400 transposase B (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	CDS	49321	49479	.	+	0	ID=cds4124;Parent=gene4238;Note=Similar in parts to many transposases including: Yersinia enterocolitica IS1400 transposase B trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 9.1e-20%2C 76.04 38d in 192 aa and to Xanthomonas campestris ISxcc1 transposase xcc3124 or xcc3135 SWALL:Q8NL31 (EMBL:AE012428) (255 aa) fasta scores: E(): 3.4e-14%2C56.18 38d in 194 aa. Note this CDS appears to be a gene remnant that has undergone a series of deletion events;gbkey=CDS;gene=trp1400B;product=putative IS1400 transposase B (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	sequence_feature	49096	49317	.	+	.	ID=id7469;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 33.5%2C E-value 1.3e-09;gbkey=misc_feature;gene=trp1400B;inference=protein motif:PFAM:PF00665
AM286416.1	EMBL	sequence_feature	49336	49479	.	+	.	ID=id7470;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 19.8%2C E-value 1.1e-05;gbkey=misc_feature;gene=trp1400B;inference=protein motif:PFAM:PF00665
AM286416.1	EMBL	gene	49605	50807	.	+	.	ID=gene4239;Name=YEP0069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0069
AM286416.1	EMBL	CDS	49605	50807	.	+	0	ID=cds4125;Parent=gene4239;Dbxref=EnsemblGenomes-Gn:YEP0069,EnsemblGenomes-Tr:CAL10090,GOA:A1JUB8,InterPro:IPR001207,UniProtKB/TrEMBL:A1JUB8,NCBI_GP:CAL10090.1;Name=CAL10090.1;Note=Highly similar to Shewanella oneidensis ISsod4%2Ctransposase so2292 SWALL:AAN55332 (EMBL:AE015670) (400 aa) fasta scores: E(): 1.5e-123%2C 75.25 38d in 400 aa%2C and to Yersinia enterocolitica hypothetical 45.7 kDa protein tnP SWALL:Q93KR3 (EMBL:AF336309) (400 aa) fasta scores: E(): 4.1e-156%2C 99.75 38d in 400 aa;gbkey=CDS;product=transposase;protein_id=CAL10090.1;transl_table=11
AM286416.1	EMBL	sequence_feature	49608	50000	.	+	.	ID=id7471;Note=Pfam match to entry PF00872 Transpo_mutator%2CTransposase%2C Mutator family%2C score 37.1%2C E-value 8.8e-11;gbkey=misc_feature;inference=protein motif:PFAM:PF00872
AM286416.1	EMBL	sequence_feature	50001	50729	.	+	.	ID=id7472;Note=Pfam match to entry PF00872 Transpo_mutator%2CTransposase%2C Mutator family%2C score 78.7%2C E-value 8.8e-21;gbkey=misc_feature;inference=protein motif:PFAM:PF00872
AM286416.1	EMBL	gene	50937	51245	.	-	.	ID=gene4240;Name=YEP0071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0071
AM286416.1	EMBL	CDS	50937	51245	.	-	0	ID=cds4126;Parent=gene4240;Dbxref=EnsemblGenomes-Gn:YEP0071,EnsemblGenomes-Tr:CAL10091,UniProtKB/TrEMBL:A1JUB9,NCBI_GP:CAL10091.1;Name=CAL10091.1;Note=Previously sequenced as: Yersinia enterocolitica hypothetical 11.4 kDa protein SWALL:Q93KR2 (EMBL:AF336309) (102 aa) fasta scores: E(): 1.9e-34%2C 100 38d in 102 aa;gbkey=CDS;product=hypothetical protein;protein_id=CAL10091.1;transl_table=11
AM286416.1	EMBL	gene	51245	51874	.	-	.	ID=gene4241;Name=YEP0072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0072
AM286416.1	EMBL	CDS	51245	51874	.	-	0	ID=cds4127;Parent=gene4241;Dbxref=EnsemblGenomes-Gn:YEP0072,EnsemblGenomes-Tr:CAL10092,InterPro:IPR002586,InterPro:IPR027417,UniProtKB/TrEMBL:A1JUC0,NCBI_GP:CAL10092.1;Name=CAL10092.1;Note=Previously sequenced as: Yersinia enterocolitica hypothetical 22.3 kDa protein SWALL:Q93KR1 (EMBL:AF336309) (209 aa) fasta scores: E(): 9.8e-72%2C 100 38d in 209 aa. Also similar to several plasmid partition proteins including: Xanthomonas axonopodis partition protein A ParA SWALL:Q8NKZ8 (EMBL:AE008924) (208 aa) fasta scores: E(): 2.9e-06%2C 31.28 38d in 195 aa and to Agrobacterium tumefaciens ParA protein SWALL:PARA_AGRTU (SWALL:P07175) (222 aa) fasta scores: E(): 0.099%2C 25.98 38d in 204 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P07175;product=conserved hypothetical protein;protein_id=CAL10092.1;transl_table=11
AM286416.1	EMBL	gene	52049	52783	.	-	.	ID=gene4242;Name=YEP0073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0073
AM286416.1	EMBL	CDS	52049	52783	.	-	0	ID=cds4128;Parent=gene4242;Dbxref=EnsemblGenomes-Gn:YEP0073,EnsemblGenomes-Tr:CAL10093,GOA:A1JUC1,InterPro:IPR002104,InterPro:IPR011010,InterPro:IPR013762,InterPro:IPR016423,UniProtKB/TrEMBL:A1JUC1,NCBI_GP:CAL10093.1;Name=CAL10093.1;Note=Similar to many site-specific recombinases including: Escherichia coli resolvase ResD SWALL:REDF_ECOLI (SWALL:P06615) (268 aa) fasta scores: E(): 2.6e-17%2C 47.24 38d in 254 aa%2C Yersinia enterocolitica hypothetical 27.8 kDa protein SWALL:Q93KR0 (EMBL:AF336309) (244 aa) fasta scores: E(): 1.1e-98%2C 100 38d in 244 aa and Escherichia coli probable site-specific recombinase IntM or inT SWALL:INTM_ECOLI (SWALL:P56979) (246 aa) fasta scores: E(): 9.3e-44%2C 50.4 38d in 248 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P56979;product=putative resolvase/recombinase;protein_id=CAL10093.1;transl_table=11
AM286416.1	EMBL	sequence_feature	52109	52681	.	-	.	ID=id7473;Note=Pfam match to entry PF00589 Phage_integrase%2C Phage integrase family%2C score 100.5%2C E-value 2.4e-27;gbkey=misc_feature;inference=protein motif:PFAM:PF00589
AM286416.1	EMBL	gene	52920	53117	.	-	.	ID=gene4243;Name=YEP0074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0074
AM286416.1	EMBL	CDS	52920	53117	.	-	0	ID=cds4129;Parent=gene4243;Dbxref=EnsemblGenomes-Gn:YEP0074,EnsemblGenomes-Tr:CAL10094,UniProtKB/TrEMBL:A1JUC2,NCBI_GP:CAL10094.1;Name=CAL10094.1;Note=Previously sequenced as: Yersinia enterocolitica hypothetical 7.4 kDa protein SWALL:Q93KQ9 (EMBL:AF336309) (65 aa) fasta scores: E(): 5.4e-28%2C 100 38d in 65 aa;gbkey=CDS;product=hypothetical protein;protein_id=CAL10094.1;transl_table=11
AM286416.1	EMBL	pseudogene	53569	54147	.	+	.	ID=gene4244;Name=YEP0075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0075;pseudo=true
AM286416.1	EMBL	CDS	53569	54147	.	+	0	ID=cds4130;Parent=gene4244;Note=Similar in parts to many transposases including: Yersinia enterocolitica IS1400 transposase B trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 1.4e-48%2C 65.44 38d in 191 aa%2C and to Xanthomonas campestris isxcc1 transposase xcc1607 SWALL:Q8PA81 (EMBL:AE012262) (255 aa) fasta scores: E(): 5.9e-47%2C63.29 38d in 188 aa. Note this CDS appears to be a gene remnant;gbkey=CDS;product=Putative transposase (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	sequence_feature	53671	54147	.	+	.	ID=id7474;Note=Pfam match to entry PF00665 rve%2C Integrase core domain%2C score 111.8%2C E-value 9.2e-31;gbkey=misc_feature;inference=protein motif:PFAM:PF00665
AM286416.1	EMBL	repeat_region	54207	54575	.	-	.	ID=id7475;Note=label:IS1328'%3B~partial insertion element IS1328;gbkey=repeat_region
AM286416.1	EMBL	pseudogene	54207	54509	.	-	.	ID=gene4245;Name=YEP0076;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0076;pseudo=true
AM286416.1	EMBL	CDS	54207	54509	.	-	0	ID=cds4131;Parent=gene4245;Note=Highly similar to the very N-terminus of Shigella flexneri 2a IS1328 transposase SWALL:Q93EZ2 (EMBL:AF326777) (334 aa) fasta scores: E(): 1.2e-30%2C 79.2 id in 101 aa. Previously sequenced as Yersinia enterocolitica IS1328 transposase trp1328 SWALL:Q9RIG6 (EMBL:AJ132945) (334 aa) fasta scores: E(): 1.4e-30%2C 77 id in 100 aa;gbkey=CDS;product=transposase for insertion sequence element IS1328 (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	INVERTED	54556	54575	.	-	.	ID=id7476;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286416.1	EMBL	pseudogene	54959	55135	.	-	.	ID=gene4246;Name=YEP0078;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0078;pseudo=true
AM286416.1	EMBL	CDS	54959	55135	.	-	0	ID=cds4132;Parent=gene4246;Note=Highly similar to the N-terminal regions of many transposases including: Xanthomonas axonopodis ISxac3 transposase SWALL:Q8NKZ0 (EMBL:AE011632) (90 aa) fasta scores: E(): 2.2e-05%2C 57.14 38d in 42 aa and to Pantoea agglomerans putative transposase A SWALL:Q9AM90 (EMBL:AF327445) (94 aa) fasta scores: E(): 0.006%2C 40.42 id in 47 aa.Previously sequenced as: Yersinia enterocolitica hypothetical 10.1 kDa protein Orf86 SWALL:Q93KQ8 (EMBL:AF336309) (88 aa) fasta scores: E(): 3.4e-35%2C 100 38d in 88 aa.;gbkey=CDS;product=putative transposase (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	sequence_feature	55010	55126	.	-	.	ID=id7477;Note=Pfam match to entry PF01527 Transposase_8%2CTransposase%2C score 36.6%2C E-value 2.3e-10;gbkey=misc_feature;inference=protein motif:PFAM:PF01527
AM286416.1	EMBL	gene	55297	55728	.	+	.	ID=gene4247;Name=YEP0080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0080
AM286416.1	EMBL	CDS	55297	55728	.	+	0	ID=cds4133;Parent=gene4247;Dbxref=EnsemblGenomes-Gn:YEP0080,EnsemblGenomes-Tr:CAL10098,GOA:A1JUC3,InterPro:IPR010261,UniProtKB/TrEMBL:A1JUC3,NCBI_GP:CAL10098.1;Name=CAL10098.1;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10098.1;transl_table=11
AM286416.1	EMBL	gene	55746	57935	.	+	.	ID=gene4248;Name=yopO;gbkey=Gene;gene=yopO;gene_biotype=protein_coding;locus_tag=YEP0081
AM286416.1	EMBL	CDS	55746	57935	.	+	0	ID=cds4134;Parent=gene4248;Dbxref=EnsemblGenomes-Gn:YEP0081,EnsemblGenomes-Tr:CAL10099,GOA:A1JUC4,InterPro:IPR000719,InterPro:IPR003547,InterPro:IPR008271,InterPro:IPR011009,InterPro:IPR019093,UniProtKB/TrEMBL:A1JUC4,NCBI_GP:CAL10099.1;Name=CAL10099.1;Note=Highly similar to Yersinia pseudotuberculosis effector protein kinase YpkA precursor SWALL:YPKA_YERPS (SWALL:Q05608) (732 aa) fasta scores: E(): 0%2C 96.98 38d in 729 aa and to Yersinia enterocolitica protein kinase YopO SWALL:Q93KQ6 (EMBL:AF336309) (729 aa) fasta scores: E(): 0%2C 100 38d in 729 aa;gbkey=CDS;gene=yopO;inference=similar to sequence:UniProtKB:Q05608;product=putative targeted effector protein kinase;protein_id=CAL10099.1;transl_table=11
AM286416.1	EMBL	sequence_feature	56142	56960	.	+	.	ID=id7478;Note=Pfam match to entry PF00069 pkinase%2C Protein kinase domain%2C score -38.6%2C E-value 7.7e-08;gbkey=misc_feature;gene=yopO;inference=protein motif:PFAM:PF00069
AM286416.1	EMBL	sequence_feature	56532	56570	.	+	.	ID=id7479;Note=PS00108 Serine/Threonine protein kinases active-site signature.;gbkey=misc_feature;gene=yopO;inference=protein motif:Prosite:PS00108
AM286416.1	EMBL	pseudogene	58175	58301	.	+	.	ID=gene4249;Name=YEP0082;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0082;pseudo=true
AM286416.1	EMBL	CDS	58175	58180	.	+	0	ID=cds4135;Parent=gene4249;Note=Highly similar to the C-terminus of Yersinia enterocolitica hypothetical 10.2 kDa protein SWALL:O85240 (EMBL:AF102990) (91 aa) fasta scores: E(): 2e-16%2C 97.5 38d in 40 aa. Note this CDS appears to be a gene remnant%3B~hypothetical protein (remnant);gbkey=CDS;product=hypothetical 10.2 kDa protein;pseudo=true;transl_table=11
AM286416.1	EMBL	CDS	58185	58301	.	+	0	ID=cds4135;Parent=gene4249;Note=Highly similar to the C-terminus of Yersinia enterocolitica hypothetical 10.2 kDa protein SWALL:O85240 (EMBL:AF102990) (91 aa) fasta scores: E(): 2e-16%2C 97.5 38d in 40 aa. Note this CDS appears to be a gene remnant%3B~hypothetical protein (remnant);gbkey=CDS;product=hypothetical 10.2 kDa protein;pseudo=true;transl_table=11
AM286416.1	EMBL	gene	58302	59168	.	+	.	ID=gene4250;Name=yopJ;gbkey=Gene;gene=yopJ;gene_biotype=protein_coding;locus_tag=YEP0083
AM286416.1	EMBL	CDS	58302	59168	.	+	0	ID=cds4136;Parent=gene4250;Dbxref=EnsemblGenomes-Gn:YEP0083,EnsemblGenomes-Tr:CAL10101,InterPro:IPR005083,UniProtKB/TrEMBL:A1JUC5,NCBI_GP:CAL10101.1;Name=CAL10101.1;Note=Similar to Yersinia pseudotuberculosis YopJ type III secretion system effector protein SWALL:YOPJ_YERPS (SWALL:P31498) (264 aa) fasta scores: E(): 2.6e-88%2C 92 38d in 250 aa%2C and to Yersinia enterocolitica Yop effector YopP SWALL:Q93KQ5 (EMBL:AF336309) (288 aa) fasta scores: E(): 7.4e-112%2C 100 38d in 288 aa;gbkey=CDS;gene=yopJ;inference=similar to sequence:UniProtKB:P31498;product=putative targeted effector protein;protein_id=CAL10101.1;transl_table=11
AM286416.1	EMBL	sequence_feature	58392	59024	.	+	.	ID=id7480;Note=Pfam match to entry PF03421 Peptidase_C55%2CPeptidase C55 family%2C score 471.9%2C E-value 3.8e-139;gbkey=misc_feature;gene=yopJ;inference=protein motif:PFAM:PF03421
AM286416.1	EMBL	pseudogene	59262	59393	.	+	.	ID=gene4251;Name=YEP0084;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0084;pseudo=true
AM286416.1	EMBL	CDS	59262	59393	.	+	0	ID=cds4137;Parent=gene4251;Note=Similar to the very C-termini of: Escherichia coli mobilization protein MbeA SWALL:MBEA_ECOLI (SWALL:P13658) (517 aa) fasta scores: E(): 1.4e-08%2C 83.72 38d in 43 aa%2CEscherichia coli MobA SWALL:Q9F899 (EMBL:AF251289) (517 aa) fasta scores: E(): 2.7e-09%2C 86.04 38d in 43 aa and Salmonella cholerae-suis mobilization protein MobA SWALL:Q93LC3 (EMBL:AY048853) (517 aa) fasta scores: E(): 2.7e-09%2C 86.04 38d in 43 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P13658;product=mobilization protein (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	gene	59787	60137	.	+	.	ID=gene4252;Name=yscM2;gbkey=Gene;gene=yscM2;gene_biotype=protein_coding;locus_tag=YEP0086
AM286416.1	EMBL	CDS	59787	60137	.	+	0	ID=cds4138;Parent=gene4252;Dbxref=EnsemblGenomes-Gn:YEP0086,EnsemblGenomes-Tr:CAL10103,GOA:A1JUC6,InterPro:IPR015103,UniProtKB/TrEMBL:A1JUC6,NCBI_GP:CAL10103.1;Name=CAL10103.1;Note=Previously sequenced as: Yersinia enterocolitica regulatory protein Yscm2 SWALL:Q93KQ4 (EMBL:AF336309) (116 aa) fasta scores: E(): 4.9e-40%2C 100 38d in 116 aa. Also highly similar to Yersinia pestis%2C and Yersinia pseudotuberculosis Yop proteins translocation protein M YscM or LcrQ or ypcd1.62 or y0019 SWALL:YSCM_YERPE (SWALL:Q00930) (115 aa) fasta scores: E(): 1.2e-17%2C 59.09 id in 110 aa;gbkey=CDS;gene=yscM2;inference=similar to sequence:UniProtKB:Q00930;product=regulatory protein;protein_id=CAL10103.1;transl_table=11
AM286416.1	EMBL	sequence_feature	60319	60489	.	+	.	ID=id7481;Note=Pfam match to entry PF01526 Transposase_7%2CTransposase%2C score 122.3%2C E-value 6.3e-34;gbkey=misc_feature;inference=protein motif:PFAM:PF01526
AM286416.1	EMBL	pseudogene	60325	61009	.	+	.	ID=gene4253;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=YEP0087;pseudo=true
AM286416.1	EMBL	CDS	60325	60492	.	+	0	ID=cds4139;Parent=gene4253;Note=Similar to many transposases including: Escherichia coli transposase for transposon Tn3 TnpA SWALL:TNP3_ECOLI (SWALL:P03008) (1015 aa) fasta scores: E(): 2e-88%2C 95.69 id in 232 aa and Klebsiella pneumoniae transposase tnpA SWALL:Q8RNS1 (EMBL:AF479774) (1001 aa) fasta scores: E(): 1.7e-89%2C 96.94 38d in 229 aa. Note this CDS has undergone several rounds of deletion and framshift mutations.;gbkey=CDS;gene=tnpA;inference=similar to sequence:UniProtKB:P03008;product=transposase for transposon Tn3 (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	CDS	60492	60896	.	+	0	ID=cds4139;Parent=gene4253;Note=Similar to many transposases including: Escherichia coli transposase for transposon Tn3 TnpA SWALL:TNP3_ECOLI (SWALL:P03008) (1015 aa) fasta scores: E(): 2e-88%2C 95.69 id in 232 aa and Klebsiella pneumoniae transposase tnpA SWALL:Q8RNS1 (EMBL:AF479774) (1001 aa) fasta scores: E(): 1.7e-89%2C 96.94 38d in 229 aa. Note this CDS has undergone several rounds of deletion and framshift mutations.;gbkey=CDS;gene=tnpA;inference=similar to sequence:UniProtKB:P03008;product=transposase for transposon Tn3 (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	CDS	60896	61009	.	+	0	ID=cds4139;Parent=gene4253;Note=Similar to many transposases including: Escherichia coli transposase for transposon Tn3 TnpA SWALL:TNP3_ECOLI (SWALL:P03008) (1015 aa) fasta scores: E(): 2e-88%2C 95.69 id in 232 aa and Klebsiella pneumoniae transposase tnpA SWALL:Q8RNS1 (EMBL:AF479774) (1001 aa) fasta scores: E(): 1.7e-89%2C 96.94 38d in 229 aa. Note this CDS has undergone several rounds of deletion and framshift mutations.;gbkey=CDS;gene=tnpA;inference=similar to sequence:UniProtKB:P03008;product=transposase for transposon Tn3 (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	pseudogene	61007	61570	.	-	.	ID=gene4254;Name=YEP0088;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0088;pseudo=true
AM286416.1	EMBL	CDS	61007	61570	.	-	0	ID=cds4140;Parent=gene4254;Note=Similar to the N-terminus of many transposases including: Shewanella oneidensis ISsod4%2C transposase so2292 SWALL:AAN55332 (EMBL:AE015670) (400 aa) fasta scores: E(): 3.8e-51%2C 69.51 38d in 187 aa. Also similar to the N-terminus of the upstream CDS YEP0069 99.242 identity in 132 aa overlap. Similar to the whole of Yersinia enterocolitica transposase Tnp SWALL:AAN37566 (EMBL:AY150843) (191 aa) fasta scores: E(): 3.4e-70%2C 100 id in 188 aa%2C and to Shewanella oneidensis ISsod4%2Ctransposase so2292 SWALL:AAN55332 (EMBL:AE015670) (400 aa) fasta scores: E(): 3.8e-51%2C 69.51 38d in 187 aa;gbkey=CDS;product=transposase (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	sequence_feature	61010	61567	.	-	.	ID=id7482;Note=Pfam match to entry PF00872 Transpo_mutator%2CTransposase%2C Mutator family%2C score -154.2%2C E-value 2e-07;gbkey=misc_feature;inference=protein motif:PFAM:PF00872
AM286416.1	EMBL	gene	61617	62168	.	-	.	ID=gene4255;Name=YEP0089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0089
AM286416.1	EMBL	CDS	61617	62168	.	-	0	ID=cds4141;Parent=gene4255;Dbxref=EnsemblGenomes-Gn:YEP0089,EnsemblGenomes-Tr:CAL10106,GOA:A1JUC7,InterPro:IPR001736,InterPro:IPR025202,UniProtKB/TrEMBL:A1JUC7,NCBI_GP:CAL10106.1;Name=CAL10106.1;Note=Similar to many nucleases including: Proteus vulgaris EDTA-resistant nuclease SWALL:BAB93759 (EMBL:AP004237) (221 aa) fasta scores: E(): 3.3e-11%2C38.09 38d in 126 aa and Salmonella typhimurium EDTA-resistant Nuclease Nuc SWALL:Q9R2H3 (EMBL:AB027308) (183 aa) fasta scores: E(): 1.3e-09%2C 32.09 38d in 134 aa. Previously sequenced as: Yersinia enterocolitica hypothetical 20.4 kDa protein SWALL:Q93KQ3 (EMBL:AF336309) (183 aa) fasta scores: E(): 1.7e-72%2C 100 38d in 183 aa.;gbkey=CDS;product=conserved hypothetical protein;protein_id=CAL10106.1;transl_table=11
AM286416.1	EMBL	repeat_region	62168	63045	.	+	.	ID=id7483;Note=label:IS1665%3B~IS4-like insertion sequence element IS1665;gbkey=repeat_region
AM286416.1	EMBL	INVERTED	62168	62183	.	+	.	ID=id7484;Note=Inverted repeat for IS4-like element;gbkey=repeat_region;rpt_type=INVERTED
AM286416.1	EMBL	gene	62514	62963	.	-	.	ID=gene4256;Name=YEP0090;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YEP0090;part=1/2
AM286416.1	EMBL	gene	62177	62512	.	-	.	ID=gene4256;Name=YEP0090;gbkey=Gene;gene_biotype=protein_coding;is_ordered=true;locus_tag=YEP0090;part=2/2
AM286416.1	EMBL	CDS	62514	62963	.	-	0	ID=cds4142;Parent=gene4256;Dbxref=EnsemblGenomes-Gn:YEP0090,EnsemblGenomes-Tr:CAL10107,InterPro:IPR024473,UniProtKB/TrEMBL:A1JJC4,NCBI_GP:CAL10107.1;Name=CAL10107.1;Note=Similar the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 or b4278 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 5.5e-50%2C 51.36 38d in 440 aa and to Shigella flexneri is4 orf s0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 8.5e-53%2C 50.82 38d in 427 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting%2C following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL10107.1;transl_table=11
AM286416.1	EMBL	CDS	62177	62512	.	-	0	ID=cds4142;Parent=gene4256;Dbxref=EnsemblGenomes-Gn:YEP0090,EnsemblGenomes-Tr:CAL10107,InterPro:IPR024473,UniProtKB/TrEMBL:A1JJC4,NCBI_GP:CAL10107.1;Name=CAL10107.1;Note=Similar the N-terminal and C-terminal regions of many transposases including: Escherichia coli transposase InsG for insertion sequence element IS4 or b4278 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 5.5e-50%2C 51.36 38d in 440 aa and to Shigella flexneri is4 orf s0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 8.5e-53%2C 50.82 38d in 427 aa. This transposase appears to lack the central transposase core domain%2C thought to be involved in metal binding%2C and possesses a possible site for programmed ribosomal frameshifting%2C following codon 150. IS1665 is also highly similar in the N-terminal and C-terminal regions to the Y. enterocolitica IS1660. Both IS1665 and IS1660 share the same inverted repeat sequences.;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS1665;protein_id=CAL10107.1;transl_table=11
AM286416.1	EMBL	sequence_feature	62507	62513	.	-	.	ID=id7485;Note=possible site of programmed ribosomal slippage;gbkey=misc_feature
AM286416.1	EMBL	gene	63019	64356	.	-	.	ID=gene4257;Name=YEP0092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0092
AM286416.1	EMBL	CDS	63019	64356	.	-	0	ID=cds4143;Parent=gene4257;Dbxref=EnsemblGenomes-Gn:YEP0092,EnsemblGenomes-Tr:CAL10108,GOA:A1JJC5,InterPro:IPR002559,InterPro:IPR012337,InterPro:IPR024473,UniProtKB/TrEMBL:A1JJC5,NCBI_GP:CAL10108.1;Name=CAL10108.1;Note=Similar to Escherichia coli transposase InsG for insertion sequence element IS4 or b4278 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 4.2e-165%2C89.72 38d in 438 aa;gbkey=CDS;inference=similar to sequence:UniProtKB:P03835;product=transposase for insertion sequence element IS4;protein_id=CAL10108.1;transl_table=11
AM286416.1	EMBL	sequence_feature	63301	63978	.	-	.	ID=id7486;Note=Pfam match to entry PF01609 Transposase_11%2CTransposase DDE domain%2C score 160.8%2C E-value 1.6e-45;gbkey=misc_feature;inference=protein motif:PFAM:PF01609
AM286416.1	EMBL	INVERTED	63031	63045	.	-	.	ID=id7487;Note=Inverted repeat for IS4-like element IS1665;gbkey=repeat_region;rpt_type=INVERTED
AM286416.1	EMBL	repeat_region	63031	64440	.	+	.	ID=id7488;Note=label:IS1660%3B~IS4-like insertion sequence element IS1660;gbkey=repeat_region
AM286416.1	EMBL	INVERTED	64424	64439	.	-	.	ID=id7489;Note=Inverted repeat for IS4-like element IS1660;gbkey=repeat_region;rpt_type=INVERTED
AM286416.1	EMBL	repeat_region	64448	65189	.	+	.	ID=id7490;Note=label:IS1328%3B~degenerate insertion element IS1328;gbkey=repeat_region
AM286416.1	EMBL	pseudogene	64448	64915	.	+	.	ID=gene4258;Name=YEP0093;gbkey=Gene;gene_biotype=pseudogene;locus_tag=YEP0093;pseudo=true
AM286416.1	EMBL	CDS	64448	64915	.	+	0	ID=cds4144;Parent=gene4258;Dbxref=PSEUDO:CAL10109.1;Note=Similar to the very C-terminus of Yersinia enterocolitica transposase for insertion sequence element IS1328 SWALL:TRA8_YEREN (SWALL:Q56897) (334 aa) fasta scores: E(): 4.7e-36%2C 61.61 38d in 198 aa and Shigella flexneri 2a IS1328 transposase SWALL:Q93EZ2 (EMBL:AF326777) (334 aa) fasta scores: E(): 2.6e-33%2C56.63 38d in 196 aa. Note this CDS lacks a possible 5' end.;gbkey=CDS;inference=similar to sequence:UniProtKB:Q56897;product=transposase for insertion sequence element IS1328 (remnant);pseudo=true;transl_table=11
AM286416.1	EMBL	sequence_feature	64481	64801	.	+	.	ID=id7491;Note=Pfam match to entry PF02371 Transposase_20%2CTransposase IS116/IS110/IS902 family%2C score 115.3%2CE-value 8.2e-32;gbkey=misc_feature;inference=protein motif:PFAM:PF02371
AM286416.1	EMBL	INVERTED	65170	65189	.	+	.	ID=id7492;Note=Inverted repeat for insertion element IS1328;gbkey=repeat_region;rpt_type=INVERTED
AM286416.1	EMBL	repeat_region	65191	65900	.	+	.	ID=id7493;Note=label:IS1541%3B~IS1541;gbkey=repeat_region
AM286416.1	EMBL	gene	65333	65791	.	+	.	ID=gene4259;Name=tnp;gbkey=Gene;gene=tnp;gene_biotype=protein_coding;locus_tag=YEP0094
AM286416.1	EMBL	CDS	65333	65791	.	+	0	ID=cds4145;Parent=gene4259;Dbxref=EnsemblGenomes-Gn:YEP0094,EnsemblGenomes-Tr:CAL10110,GOA:A1JUD1,InterPro:IPR002686,UniProtKB/TrEMBL:A1JUD1,NCBI_GP:CAL10110.1;Name=CAL10110.1;Note=Identical to Yersinia enterocolitica IS1541 element transposase tnp SWALL:Q9X9G8 (EMBL:AJ238015) (152 aa) fasta scores: E(): 4.6e-66%2C 100 38d in 152 aa and highly similar to Yersinia pestis putative transposase y1761 SWALL:AAM85329 (EMBL:AE013779) (169 aa) fasta scores: E(): 8.3e-64%2C 96.71 38d in 152 aa;gbkey=CDS;gene=tnp;product=transposase for IS1541;protein_id=CAL10110.1;transl_table=11
AM286416.1	EMBL	sequence_feature	65387	65698	.	+	.	ID=id7494;Note=Pfam match to entry PF01797 Transposase_17%2CTransposase IS200 like%2C score 222.9%2C E-value 3.3e-64;gbkey=misc_feature;gene=tnp;inference=protein motif:PFAM:PF01797
AM286416.1	EMBL	gene	65993	66238	.	+	.	ID=gene4260;Name=YEP0095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0095
AM286416.1	EMBL	CDS	65993	66238	.	+	0	ID=cds4146;Parent=gene4260;Dbxref=EnsemblGenomes-Gn:YEP0095,EnsemblGenomes-Tr:CAL10111,InterPro:IPR019661,UniProtKB/TrEMBL:A1JUD2,NCBI_GP:CAL10111.1;Name=CAL10111.1;Note=Similar to Escherichia coli copy number control protein CopB SWALL:Q8RTD2 (EMBL:AF467508) (82 aa) fasta scores: E(): 2.3%2C 30.15 38d in 63 aa. Previously sequenced as: Yersinia enterocolitica putative replication protein RepC SWALL:Q93KQ2 (EMBL:AF336309) (81 aa) fasta scores: E(): 8.6e-31%2C 100 38d in 81 aa;gbkey=CDS;product=putative plasmid copy number control protein;protein_id=CAL10111.1;transl_table=11
AM286416.1	EMBL	gene	66500	66556	.	+	.	ID=gene4261;Name=YEP0096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=YEP0096
AM286416.1	EMBL	CDS	66500	66556	.	+	0	ID=cds4147;Parent=gene4261;Dbxref=EnsemblGenomes-Gn:YEP0096,EnsemblGenomes-Tr:CAL10112,UniProtKB/TrEMBL:A1JUD3,NCBI_GP:CAL10112.1;Name=CAL10112.1;Note=Similar to Yersinia enterocolitica putative leader peptide RepB repB SWALL:Q93KQ1 (EMBL:AF336309) (18 aa) fasta scores: E(): 1.4e-07%2C 100 38d in 18 aa;gbkey=CDS;product=putative leader peptide RepB;protein_id=CAL10112.1;transl_table=11
AM286416.1	EMBL	gene	66549	67571	.	+	.	ID=gene4262;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=YEP0097
AM286416.1	EMBL	CDS	66549	67571	.	+	0	ID=cds4148;Parent=gene4262;Dbxref=EnsemblGenomes-Gn:YEP0097,EnsemblGenomes-Tr:CAL10113,GOA:A1JUD4,InterPro:IPR003446,UniProtKB/TrEMBL:A1JUD4,NCBI_GP:CAL10113.1;Name=CAL10113.1;Note=Similar to Escherichia coli replication initiation protein RepA1 SWALL:REP4_ECOLI (SWALL:P13961) (340 aa) fasta scores: E(): 1.3e-51%2C 43.71 38d in 334 aa. Previously sequenced as: to Yersinia enterocolitica putative replication initiator protein RepA SWALL:Q933Q8 (EMBL:AF336309) (340 aa) fasta scores: E(): 1.7e-138%2C 100 id in 340 aa. Also similar to Klebsiella pneumoniae RepA SWALL:Q48418 (EMBL:U27345) (351 aa) fasta scores: E(): 5.4e-65%2C 54.57 38d in 328 aa;gbkey=CDS;gene=repA;inference=similar to sequence:UniProtKB:P13961;product=replication initiation protein;protein_id=CAL10113.1;transl_table=11
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