YE105_C0002 SM00344 helix_turn_helix ASNC type YE105_C0005 SM00327 von Willebrand factor (vWF) type A domain YE105_C0006 SM00382 ATPases associated with a variety of cellular activities YE105_C0009 SM00382 ATPases associated with a variety of cellular activities YE105_C0013 SM00354 helix_turn _helix lactose operon repressor YE105_C0015 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C0015 SM00895 YE105_C0015 YE105_C0023 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YE105_C0023 SM00474 3'-5' exonuclease YE105_C0023 SM00475 5'-3' exonuclease YE105_C0023 SM00482 DNA polymerase A domain YE105_C0027 SM00729 Elongator protein 3, MiaB family, Radical SAM YE105_C0028 SM00382 ATPases associated with a variety of cellular activities YE105_C0028 SM00448 cheY-homologous receiver domain YE105_C0029 SM00091 PAS domain YE105_C0029 SM00387 Histidine kinase-like ATPases YE105_C0029 SM00388 His Kinase A (phosphoacceptor) domain YE105_C0031 SM01230 YE105_C0031 YE105_C0038 SM00421 helix_turn_helix, Lux Regulon YE105_C0039 SM00421 helix_turn_helix, Lux Regulon YE105_C0044 SM00487 DEAD-like helicases superfamily YE105_C0044 SM00490 helicase superfamily c-terminal domain YE105_C0046 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YE105_C0046 SM00954 Region found in RelA / SpoT proteins YE105_C0047 SM01409 YE105_C0047 YE105_C0048 SM00072 Guanylate kinase homologues. YE105_C0049 SM00532 Ligase N family YE105_C0054 SM00052 Putative diguanylate phosphodiesterase YE105_C0054 SM00091 PAS domain YE105_C0054 SM00267 diguanylate cyclase YE105_C0055 SM00849 Metallo-beta-lactamase superfamily YE105_C0065 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain YE105_C0065 SM01232 YE105_C0065 YE105_C0073 SM00829 Enoylreductase YE105_C0079 SM00450 Rhodanese Homology Domain YE105_C0083 SM00971 Serine acetyltransferase, N-terminal YE105_C0085 SM00342 helix_turn_helix, arabinose operon control protein YE105_C0086 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C0086 SM00387 Histidine kinase-like ATPases YE105_C0086 SM00388 His Kinase A (phosphoacceptor) domain YE105_C0087 SM00448 cheY-homologous receiver domain YE105_C0087 SM00862 Transcriptional regulatory protein, C terminal YE105_C0106 SM00382 ATPases associated with a variety of cellular activities YE105_C0106 SM01086 C-terminal, D2-small domain, of ClpB protein YE105_C0109 SM00354 helix_turn _helix lactose operon repressor YE105_C0110 SM00487 DEAD-like helicases superfamily YE105_C0110 SM00490 helicase superfamily c-terminal domain YE105_C0119 SM00859 Semialdehyde dehydrogenase, NAD binding domain YE105_C0127 SM00382 ATPases associated with a variety of cellular activities YE105_C0140 SM00382 ATPases associated with a variety of cellular activities YE105_C0145 SM00382 ATPases associated with a variety of cellular activities YE105_C0167 SM00060 Fibronectin type 3 domain YE105_C0169 SM00487 DEAD-like helicases superfamily YE105_C0169 SM00490 helicase superfamily c-terminal domain YE105_C0171 SM00357 Cold shock protein domain YE105_C0171 SM00382 ATPases associated with a variety of cellular activities YE105_C0171 SM00959 Rho termination factor, N-terminal domain YE105_C0175 SM00984 UDP binding domain YE105_C0190 SM01219 YE105_C0190 YE105_C0204 SM00341 Helicase and RNase D C-terminal YE105_C0204 SM00487 DEAD-like helicases superfamily YE105_C0204 SM00490 helicase superfamily c-terminal domain YE105_C0204 SM00956 YE105_C0204 YE105_C0223 SM00382 ATPases associated with a variety of cellular activities YE105_C0223 SM00962 SRP54-type protein, GTPase domain YE105_C0223 SM00963 SRP54-type protein, helical bundle domain YE105_C0224 SM00382 ATPases associated with a variety of cellular activities YE105_C0234 SM00382 ATPases associated with a variety of cellular activities YE105_C0235 SM00382 ATPases associated with a variety of cellular activities YE105_C0245 SM00382 ATPases associated with a variety of cellular activities YE105_C0264 SM01004 Delta-aminolevulinic acid dehydratase YE105_C0265 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YE105_C0283 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. YE105_C0283 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YE105_C0284 SM00649 Ribosomal protein L11/L12 YE105_C0289 SM00663 RNA polymerase I subunit A N-terminus YE105_C0290 SM00876 Biotin and Thiamin Synthesis associated domain YE105_C0301 SM00411 bacterial (prokaryotic) histone like domain YE105_C0303 SM01209 YE105_C0303 YE105_C0303 SM01210 YE105_C0303 YE105_C0304 SM00798 AICARFT/IMPCHase bienzyme YE105_C0304 SM00851 MGS-like domain YE105_C0309 SM00421 helix_turn_helix, Lux Regulon YE105_C0309 SM00448 cheY-homologous receiver domain YE105_C0310 SM00387 Histidine kinase-like ATPases YE105_C0310 SM00388 His Kinase A (phosphoacceptor) domain YE105_C0310 SM00448 cheY-homologous receiver domain YE105_C0323 SM00342 helix_turn_helix, arabinose operon control protein YE105_C0333 SM00382 ATPases associated with a variety of cellular activities YE105_C0347 SM00965 Secretin and TonB N terminus short domain YE105_C0348 SM00382 ATPases associated with a variety of cellular activities YE105_C0354 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C0355 SM00382 ATPases associated with a variety of cellular activities YE105_C0363 SM00729 Elongator protein 3, MiaB family, Radical SAM YE105_C0375 SM00883 Chaperonin 10 Kd subunit YE105_C0379 SM00841 Elongation factor P, C-terminal YE105_C0379 SM01185 YE105_C0379 YE105_C0391 SM00479 YE105_C0391 YE105_C0395 SM00257 Lysin motif YE105_C0395 SM00646 YE105_C0395 YE105_C0396 SM00853 MutL C terminal dimerisation domain YE105_C0396 SM01340 YE105_C0396 YE105_C0400 SM00244 prohibitin homologues YE105_C0401 SM00244 prohibitin homologues YE105_C0403 SM00788 Adenylosuccinate synthetase YE105_C0405 SM00316 Ribosomal protein S1-like RNA-binding domain YE105_C0405 SM00357 Cold shock protein domain YE105_C0405 SM00955 YE105_C0405 YE105_C0406 SM00967 RNA 2'-O ribose methyltransferase substrate binding YE105_C0423 SM01091 Transporter associated domain YE105_C0430 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C0430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C0443 SM00387 Histidine kinase-like ATPases YE105_C0443 SM00388 His Kinase A (phosphoacceptor) domain YE105_C0444 SM00448 cheY-homologous receiver domain YE105_C0444 SM00862 Transcriptional regulatory protein, C terminal YE105_C0447 SM01103 YE105_C0447 YE105_C0449 SM00382 ATPases associated with a variety of cellular activities YE105_C0454 SM00316 Ribosomal protein S1-like RNA-binding domain YE105_C0454 SM00322 K homology RNA-binding domain YE105_C0455 SM00173 Ras subfamily of RAS small GTPases YE105_C0458 SM01387 YE105_C0458 YE105_C0459 SM00316 Ribosomal protein S1-like RNA-binding domain YE105_C0459 SM00322 K homology RNA-binding domain YE105_C0460 SM00028 Tetratricopeptide repeats YE105_C0461 SM00487 DEAD-like helicases superfamily YE105_C0461 SM00490 helicase superfamily c-terminal domain YE105_C0479 SM00382 ATPases associated with a variety of cellular activities YE105_C0484 SM00859 Semialdehyde dehydrogenase, NAD binding domain YE105_C0486 SM00072 Guanylate kinase homologues. YE105_C0488 SM00382 ATPases associated with a variety of cellular activities YE105_C0489 SM00382 ATPases associated with a variety of cellular activities YE105_C0494 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C0494 SM00866 YE105_C0494 YE105_C0501 SM00382 ATPases associated with a variety of cellular activities YE105_C0502 SM00382 ATPases associated with a variety of cellular activities YE105_C0518 SM00530 Helix-turn-helix XRE-family like proteins YE105_C0521 SM00382 ATPases associated with a variety of cellular activities YE105_C0525 SM00421 helix_turn_helix, Lux Regulon YE105_C0537 SM01133 YE105_C0537 YE105_C0541 SM00382 ATPases associated with a variety of cellular activities YE105_C0552 SM01120 YE105_C0552 YE105_C0561 SM00091 PAS domain YE105_C0562 SM00354 helix_turn _helix lactose operon repressor YE105_C0563 SM00640 Glycosyl hydrolases family 32 YE105_C0570 SM00267 diguanylate cyclase YE105_C0579 SM00749 bacterial OsmY and nodulation domain YE105_C0584 SM01133 YE105_C0584 YE105_C0585 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain YE105_C0590 SM00382 ATPases associated with a variety of cellular activities YE105_C0591 SM00530 Helix-turn-helix XRE-family like proteins YE105_C0592 SM00829 Enoylreductase YE105_C0595 SM00382 ATPases associated with a variety of cellular activities YE105_C0597 SM00267 diguanylate cyclase YE105_C0599 SM00831 Cation transporter/ATPase, N-terminus YE105_C0603 SM00855 Phosphoglycerate mutase family YE105_C0604 SM00342 helix_turn_helix, arabinose operon control protein YE105_C0604 SM00871 Bacterial transcription activator, effector binding domain YE105_C0606 SM00448 cheY-homologous receiver domain YE105_C0606 SM00862 Transcriptional regulatory protein, C terminal YE105_C0612 SM00852 Probable molybdopterin binding domain YE105_C0616 SM00271 DnaJ molecular chaperone homology domain YE105_C0620 SM00904 Riboflavin kinase YE105_C0626 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain YE105_C0627 SM00851 MGS-like domain YE105_C0627 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YE105_C0634 SM00650 Ribosomal RNA adenine dimethylases YE105_C0638 SM00271 DnaJ molecular chaperone homology domain YE105_C0641 SM00634 Bacterial Ig-like domain (group 1) YE105_C0642 SM00487 DEAD-like helicases superfamily YE105_C0642 SM00490 helicase superfamily c-terminal domain YE105_C0643 SM00486 DNA polymerase type-B family YE105_C0645 SM00382 ATPases associated with a variety of cellular activities YE105_C0657 SM00363 S4 RNA-binding domain YE105_C0659 SM00382 ATPases associated with a variety of cellular activities YE105_C0659 SM01086 C-terminal, D2-small domain, of ClpB protein YE105_C0662 SM00830 Chorismate mutase type II YE105_C0663 SM00830 Chorismate mutase type II YE105_C0665 SM00448 cheY-homologous receiver domain YE105_C0665 SM00850 LytTr DNA-binding domain YE105_C0672 SM00382 ATPases associated with a variety of cellular activities YE105_C0672 SM00962 SRP54-type protein, GTPase domain YE105_C0672 SM00963 SRP54-type protein, helical bundle domain YE105_C0674 SM01091 Transporter associated domain YE105_C0680 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YE105_C0682 SM00382 ATPases associated with a variety of cellular activities YE105_C0688 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YE105_C0698 SM01012 YE105_C0698 YE105_C0706 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor YE105_C0707 SM00838 Elongation factor G C-terminus YE105_C0707 SM00889 Elongation factor G, domain IV YE105_C0709 SM01235 YE105_C0709 YE105_C0712 SM00822 YE105_C0712 YE105_C0715 SM00825 Beta-ketoacyl synthase YE105_C0717 SM00382 ATPases associated with a variety of cellular activities YE105_C0719 SM00382 ATPases associated with a variety of cellular activities YE105_C0734 SM00533 DNA-binding domain of DNA mismatch repair MUTS family YE105_C0734 SM00534 ATPase domain of DNA mismatch repair MUTS family YE105_C0736 SM00257 Lysin motif YE105_C0773 SM01329 YE105_C0773 YE105_C0774 SM00917 LeuA allosteric (dimerisation) domain YE105_C0779 SM00354 helix_turn _helix lactose operon repressor YE105_C0794 SM00842 Cell division protein FtsA YE105_C0795 SM00864 Tubulin/FtsZ family, GTPase domain YE105_C0795 SM00865 Tubulin/FtsZ family, C-terminal domain YE105_C0799 SM00957 SecA DEAD-like domain YE105_C0799 SM00958 SecA preprotein cross-linking domain YE105_C0804 SM01240 YE105_C0804 YE105_C0809 SM00644 YE105_C0809 YE105_C0812 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C0812 SM00895 YE105_C0812 YE105_C0817 SM00342 helix_turn_helix, arabinose operon control protein YE105_C0829 SM00947 Carbonic anhydrase YE105_C0830 SM00382 ATPases associated with a variety of cellular activities YE105_C0842 SM00487 DEAD-like helicases superfamily YE105_C0842 SM00490 helicase superfamily c-terminal domain YE105_C0842 SM00847 Helicase associated domain (HA2) Add an annotation YE105_C0844 SM00382 ATPases associated with a variety of cellular activities YE105_C0855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YE105_C0856 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YE105_C0857 SM00073 Histidine Phosphotransfer domain YE105_C0857 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C0857 SM00387 Histidine kinase-like ATPases YE105_C0857 SM00388 His Kinase A (phosphoacceptor) domain YE105_C0857 SM00448 cheY-homologous receiver domain YE105_C0859 SM00954 Region found in RelA / SpoT proteins YE105_C0862 SM01192 YE105_C0862 YE105_C0862 SM01193 YE105_C0862 YE105_C0866 SM01011 Aminopeptidase P, N-terminal domain YE105_C0873 SM00822 YE105_C0873 YE105_C0880 SM00448 cheY-homologous receiver domain YE105_C0880 SM00862 Transcriptional regulatory protein, C terminal YE105_C0881 SM00387 Histidine kinase-like ATPases YE105_C0881 SM00388 His Kinase A (phosphoacceptor) domain YE105_C0887 SM00937 YE105_C0887 YE105_C0890 SM00382 ATPases associated with a variety of cellular activities YE105_C0893 SM00530 Helix-turn-helix XRE-family like proteins YE105_C0895 SM00530 Helix-turn-helix XRE-family like proteins YE105_C0899 SM00091 PAS domain YE105_C0899 SM00267 diguanylate cyclase YE105_C0900 SM00344 helix_turn_helix ASNC type YE105_C0904 SM00354 helix_turn _helix lactose operon repressor YE105_C0905 SM00271 DnaJ molecular chaperone homology domain YE105_C0907 SM00822 YE105_C0907 YE105_C0909 SM00947 Carbonic anhydrase YE105_C0913 SM00382 ATPases associated with a variety of cellular activities YE105_C0923 SM00862 Transcriptional regulatory protein, C terminal YE105_C0926 SM00849 Metallo-beta-lactamase superfamily YE105_C0931 SM00354 helix_turn _helix lactose operon repressor YE105_C0933 SM00563 Phosphate acyltransferases YE105_C0937 SM00927 DNA mismatch repair enzyme MutH YE105_C0939 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. YE105_C0950 SM00646 YE105_C0950 YE105_C0951 SM00925 MltA specific insert domain YE105_C0959 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs YE105_C0959 SM00475 5'-3' exonuclease YE105_C0968 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YE105_C0977 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YE105_C0979 SM00935 Outer membrane protein (OmpH-like) YE105_C0985 SM00481 DNA polymerase alpha chain like domain YE105_C0989 SM00977 TilS substrate C-terminal domain YE105_C0993 SM01322 YE105_C0993 YE105_C1001 SM00382 ATPases associated with a variety of cellular activities YE105_C1001 SM00930 YE105_C1001 YE105_C1004 SM00155 Phospholipase D. Active site motifs. YE105_C1005 SM00881 CoA binding domain YE105_C1006 SM01144 YE105_C1006 YE105_C1008 SM00967 RNA 2'-O ribose methyltransferase substrate binding YE105_C1013 SM00347 helix_turn_helix multiple antibiotic resistance protein YE105_C1022 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C1025 SM00382 ATPases associated with a variety of cellular activities YE105_C1030 SM01007 Class II Aldolase and Adducin N-terminal domain YE105_C1036 SM00710 Parallel beta-helix repeats YE105_C1036 SM00912 haemagglutination activity domain YE105_C1044 SM00900 YE105_C1044 YE105_C1062 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YE105_C1064 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C1064 SM00866 YE105_C1064 YE105_C1069 SM01068 Putative carbohydrate binding domain YE105_C1085 SM00448 cheY-homologous receiver domain YE105_C1085 SM00862 Transcriptional regulatory protein, C terminal YE105_C1086 SM00091 PAS domain YE105_C1086 SM00387 Histidine kinase-like ATPases YE105_C1086 SM00388 His Kinase A (phosphoacceptor) domain YE105_C1090 SM00642 Alpha-amylase domain YE105_C1098 SM01323 YE105_C1098 YE105_C1109 SM00861 Transketolase, pyrimidine binding domain YE105_C1112 SM00981 YE105_C1112 YE105_C1128 SM00382 ATPases associated with a variety of cellular activities YE105_C1128 SM00994 ClpX C4-type zinc finger YE105_C1128 SM01086 C-terminal, D2-small domain, of ClpB protein YE105_C1129 SM00382 ATPases associated with a variety of cellular activities YE105_C1129 SM00464 Found in ATP-dependent protease La (LON) YE105_C1130 SM00411 bacterial (prokaryotic) histone like domain YE105_C1132 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YE105_C1138 SM00344 helix_turn_helix ASNC type YE105_C1139 SM00382 ATPases associated with a variety of cellular activities YE105_C1140 SM00382 ATPases associated with a variety of cellular activities YE105_C1141 SM00938 Nitrogen regulatory protein P-II YE105_C1150 SM00382 ATPases associated with a variety of cellular activities YE105_C1169 SM00382 ATPases associated with a variety of cellular activities YE105_C1171 SM00493 YE105_C1171 YE105_C1172 SM00387 Histidine kinase-like ATPases YE105_C1191 SM00422 helix_turn_helix, mercury resistance YE105_C1193 SM00244 prohibitin homologues YE105_C1195 SM00822 YE105_C1195 YE105_C1197 SM00382 ATPases associated with a variety of cellular activities YE105_C1200 SM01001 AIR carboxylase YE105_C1203 SM00840 YE105_C1203 YE105_C1207 SM00382 ATPases associated with a variety of cellular activities YE105_C1210 SM00448 cheY-homologous receiver domain YE105_C1210 SM00862 Transcriptional regulatory protein, C terminal YE105_C1214 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. YE105_C1218 SM00382 ATPases associated with a variety of cellular activities YE105_C1223 SM00421 helix_turn_helix, Lux Regulon YE105_C1225 SM00357 Cold shock protein domain YE105_C1227 SM00267 diguanylate cyclase YE105_C1229 SM00729 Elongator protein 3, MiaB family, Radical SAM YE105_C1232 SM00936 Penicillin-binding protein 5, C-terminal domain YE105_C1243 SM00382 ATPases associated with a variety of cellular activities YE105_C1246 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C1249 SM00116 Domain in cystathionine beta-synthase and other proteins. YE105_C1249 SM01091 Transporter associated domain YE105_C1252 SM00729 Elongator protein 3, MiaB family, Radical SAM YE105_C1265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C1272 SM00448 cheY-homologous receiver domain YE105_C1272 SM00862 Transcriptional regulatory protein, C terminal YE105_C1273 SM00387 Histidine kinase-like ATPases YE105_C1273 SM00388 His Kinase A (phosphoacceptor) domain YE105_C1285 SM00796 Allophanate hydrolase subunit 1 YE105_C1286 SM00797 Allophanate hydrolase subunit 2 YE105_C1296 SM00861 Transketolase, pyrimidine binding domain YE105_C1299 SM00881 CoA binding domain YE105_C1314 SM00855 Phosphoglycerate mutase family YE105_C1315 SM00477 DNA/RNA non-specific endonuclease YE105_C1315 SM00892 DNA/RNA non-specific endonuclease YE105_C1325 SM00382 ATPases associated with a variety of cellular activities YE105_C1333 SM00990 YE105_C1333 YE105_C1335 SM00482 DNA polymerase A domain YE105_C1341 SM00530 Helix-turn-helix XRE-family like proteins YE105_C1342 SM00530 Helix-turn-helix XRE-family like proteins YE105_C1368 SM00382 ATPases associated with a variety of cellular activities YE105_C1372 SM00729 Elongator protein 3, MiaB family, Radical SAM YE105_C1372 SM00876 Biotin and Thiamin Synthesis associated domain YE105_C1376 SM00382 ATPases associated with a variety of cellular activities YE105_C1377 SM00487 DEAD-like helicases superfamily YE105_C1377 SM00490 helicase superfamily c-terminal domain YE105_C1380 SM00729 Elongator protein 3, MiaB family, Radical SAM YE105_C1387 SM00382 ATPases associated with a variety of cellular activities YE105_C1390 SM00487 DEAD-like helicases superfamily YE105_C1390 SM00490 helicase superfamily c-terminal domain YE105_C1393 SM00116 Domain in cystathionine beta-synthase and other proteins. YE105_C1396 SM01118 YE105_C1396 YE105_C1400 SM00382 ATPases associated with a variety of cellular activities YE105_C1409 SM00382 ATPases associated with a variety of cellular activities YE105_C1410 SM00450 Rhodanese Homology Domain YE105_C1415 SM00382 ATPases associated with a variety of cellular activities YE105_C1424 SM00487 DEAD-like helicases superfamily YE105_C1424 SM00488 YE105_C1424 YE105_C1424 SM00491 YE105_C1424 YE105_C1429 SM00903 Flavin reductase like domain YE105_C1431 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YE105_C1431 SM00091 PAS domain YE105_C1431 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C1432 SM00382 ATPases associated with a variety of cellular activities YE105_C1434 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C1434 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YE105_C1441 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. YE105_C1449 SM00382 ATPases associated with a variety of cellular activities YE105_C1451 SM00852 Probable molybdopterin binding domain YE105_C1454 SM00382 ATPases associated with a variety of cellular activities YE105_C1459 SM00829 Enoylreductase YE105_C1464 SM00354 helix_turn _helix lactose operon repressor YE105_C1466 SM00382 ATPases associated with a variety of cellular activities YE105_C1468 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. YE105_C1468 SM00382 ATPases associated with a variety of cellular activities YE105_C1469 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YE105_C1485 SM00919 Malic enzyme, NAD binding domain YE105_C1485 SM01274 YE105_C1485 YE105_C1499 SM01091 Transporter associated domain YE105_C1507 SM00382 ATPases associated with a variety of cellular activities YE105_C1512 SM01350 YE105_C1512 YE105_C1524 SM00382 ATPases associated with a variety of cellular activities YE105_C1533 SM00382 ATPases associated with a variety of cellular activities YE105_C1540 SM00877 YE105_C1540 YE105_C1541 SM00877 YE105_C1541 YE105_C1549 SM00877 YE105_C1549 YE105_C1550 SM00877 YE105_C1550 YE105_C1556 SM00877 YE105_C1556 YE105_C1557 SM00877 YE105_C1557 YE105_C1559 SM00342 helix_turn_helix, arabinose operon control protein YE105_C1575 SM00382 ATPases associated with a variety of cellular activities YE105_C1579 SM00855 Phosphoglycerate mutase family YE105_C1582 SM00421 helix_turn_helix, Lux Regulon YE105_C1591 SM00382 ATPases associated with a variety of cellular activities YE105_C1591 SM01086 C-terminal, D2-small domain, of ClpB protein YE105_C1613 SM00420 helix_turn_helix, Deoxyribose operon repressor YE105_C1613 SM01134 YE105_C1613 YE105_C1615 SM00260 Two component signalling adaptor domain YE105_C1615 SM00448 cheY-homologous receiver domain YE105_C1617 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C1620 SM00382 ATPases associated with a variety of cellular activities YE105_C1624 SM00387 Histidine kinase-like ATPases YE105_C1625 SM00421 helix_turn_helix, Lux Regulon YE105_C1625 SM00448 cheY-homologous receiver domain YE105_C1626 SM00448 cheY-homologous receiver domain YE105_C1627 SM00091 PAS domain YE105_C1627 SM00387 Histidine kinase-like ATPases YE105_C1628 SM00764 Citrate lyase ligase C-terminal domain YE105_C1651 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C1651 SM00387 Histidine kinase-like ATPases YE105_C1651 SM00388 His Kinase A (phosphoacceptor) domain YE105_C1651 SM00448 cheY-homologous receiver domain YE105_C1652 SM00421 helix_turn_helix, Lux Regulon YE105_C1652 SM00448 cheY-homologous receiver domain YE105_C1665 SM00344 helix_turn_helix ASNC type YE105_C1667 SM00829 Enoylreductase YE105_C1668 SM01038 Beta galactosidase small chain YE105_C1669 SM00354 helix_turn _helix lactose operon repressor YE105_C1670 SM00357 Cold shock protein domain YE105_C1672 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C1672 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C1674 SM00831 Cation transporter/ATPase, N-terminus YE105_C1675 SM00829 Enoylreductase YE105_C1681 SM00073 Histidine Phosphotransfer domain YE105_C1681 SM00260 Two component signalling adaptor domain YE105_C1681 SM00387 Histidine kinase-like ATPases YE105_C1681 SM01231 YE105_C1681 YE105_C1682 SM00260 Two component signalling adaptor domain YE105_C1683 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C1683 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C1683 SM00319 Homologues of the ligand binding domain of Tar YE105_C1684 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C1684 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C1684 SM00319 Homologues of the ligand binding domain of Tar YE105_C1685 SM00138 Methyltransferase, chemotaxis proteins YE105_C1686 SM00448 cheY-homologous receiver domain YE105_C1687 SM00448 cheY-homologous receiver domain YE105_C1693 SM00634 Bacterial Ig-like domain (group 1) YE105_C1696 SM00858 YE105_C1696 YE105_C1705 SM00047 Lysozyme subfamily 2 YE105_C1717 SM00382 ATPases associated with a variety of cellular activities YE105_C1726 SM00478 endonuclease III YE105_C1727 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YE105_C1728 SM00342 helix_turn_helix, arabinose operon control protein YE105_C1739 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C1739 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YE105_C1741 SM00382 ATPases associated with a variety of cellular activities YE105_C1752 SM00530 Helix-turn-helix XRE-family like proteins YE105_C1753 SM00612 YE105_C1753 YE105_C1754 SM00903 Flavin reductase like domain YE105_C1767 SM00642 Alpha-amylase domain YE105_C1771 SM00421 helix_turn_helix, Lux Regulon YE105_C1771 SM00448 cheY-homologous receiver domain YE105_C1772 SM00465 GIY-YIG type nucleases (URI domain) YE105_C1810 SM00530 Helix-turn-helix XRE-family like proteins YE105_C1825 SM01400 YE105_C1825 YE105_C1829 SM00937 YE105_C1829 YE105_C1835 SM00267 diguanylate cyclase YE105_C1838 SM00481 DNA polymerase alpha chain like domain YE105_C1849 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C1849 SM00387 Histidine kinase-like ATPases YE105_C1852 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C1862 SM00866 YE105_C1862 YE105_C1866 SM00869 Autotransporter beta-domain YE105_C1869 SM00257 Lysin motif YE105_C1877 SM00420 helix_turn_helix, Deoxyribose operon repressor YE105_C1877 SM01134 YE105_C1877 YE105_C1881 SM00363 S4 RNA-binding domain YE105_C1896 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YE105_C1897 SM00382 ATPases associated with a variety of cellular activities YE105_C1900 SM00382 ATPases associated with a variety of cellular activities YE105_C1902 SM00257 Lysin motif YE105_C1913 SM00487 DEAD-like helicases superfamily YE105_C1913 SM00491 YE105_C1913 YE105_C1917 SM00341 Helicase and RNase D C-terminal YE105_C1917 SM00474 3'-5' exonuclease YE105_C1937 SM01022 YE105_C1937 YE105_C1939 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YE105_C1939 SM00091 PAS domain YE105_C1939 SM00267 diguanylate cyclase YE105_C1940 SM00972 Spore Coat Protein U domain YE105_C1942 SM00972 Spore Coat Protein U domain YE105_C1943 SM00972 Spore Coat Protein U domain YE105_C1944 SM00972 Spore Coat Protein U domain YE105_C1949 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. YE105_C1950 SM00945 ProQ/FINO family YE105_C1951 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YE105_C1951 SM00245 tail specific protease YE105_C1956 SM00346 helix_turn_helix isocitrate lyase regulation YE105_C1957 SM00644 YE105_C1957 YE105_C1962 SM00382 ATPases associated with a variety of cellular activities YE105_C1980 SM00382 ATPases associated with a variety of cellular activities YE105_C1989 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain YE105_C1994 SM00873 B3/4 domain YE105_C1994 SM00874 tRNA synthetase B5 domain YE105_C1994 SM00896 Ferredoxin-fold anticodon binding domain YE105_C1995 SM00411 bacterial (prokaryotic) histone like domain YE105_C2000 SM00382 ATPases associated with a variety of cellular activities YE105_C2023 SM00382 ATPases associated with a variety of cellular activities YE105_C2034 SM00354 helix_turn _helix lactose operon repressor YE105_C2038 SM00479 YE105_C2038 YE105_C2048 SM00347 helix_turn_helix multiple antibiotic resistance protein YE105_C2053 SM00363 S4 RNA-binding domain YE105_C2062 SM00382 ATPases associated with a variety of cellular activities YE105_C2063 SM00382 ATPases associated with a variety of cellular activities YE105_C2069 SM00382 ATPases associated with a variety of cellular activities YE105_C2076 SM00953 YE105_C2076 YE105_C2078 SM00091 PAS domain YE105_C2078 SM00382 ATPases associated with a variety of cellular activities YE105_C2080 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YE105_C2085 SM00148 Phospholipase C, catalytic domain (part); domain X YE105_C2086 SM00890 Domain of unknown function YE105_C2095 SM00382 ATPases associated with a variety of cellular activities YE105_C2095 SM00487 DEAD-like helicases superfamily YE105_C2095 SM00490 helicase superfamily c-terminal domain YE105_C2095 SM00847 Helicase associated domain (HA2) Add an annotation YE105_C2097 SM00530 Helix-turn-helix XRE-family like proteins YE105_C2098 SM00020 Trypsin-like serine protease YE105_C2101 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C2101 SM00387 Histidine kinase-like ATPases YE105_C2101 SM00388 His Kinase A (phosphoacceptor) domain YE105_C2102 SM00448 cheY-homologous receiver domain YE105_C2102 SM00862 Transcriptional regulatory protein, C terminal YE105_C2106 SM01002 Alanine dehydrogenase/PNT, C-terminal domain YE105_C2106 SM01003 Alanine dehydrogenase/PNT, N-terminal domain YE105_C2109 SM00100 Cyclic nucleotide-monophosphate binding domain YE105_C2109 SM00419 helix_turn_helix, cAMP Regulatory protein YE105_C2112 SM00871 Bacterial transcription activator, effector binding domain YE105_C2113 SM00822 YE105_C2113 YE105_C2114 SM00098 Alkaline phosphatase homologues YE105_C2122 SM00644 YE105_C2122 YE105_C2128 SM00354 helix_turn _helix lactose operon repressor YE105_C2131 SM00857 Resolvase, N terminal domain YE105_C2137 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C2140 SM00344 helix_turn_helix ASNC type YE105_C2142 SM00347 helix_turn_helix multiple antibiotic resistance protein YE105_C2149 SM00421 helix_turn_helix, Lux Regulon YE105_C2191 SM00421 helix_turn_helix, Lux Regulon YE105_C2196 SM00354 helix_turn _helix lactose operon repressor YE105_C2202 SM00342 helix_turn_helix, arabinose operon control protein YE105_C2204 SM00382 ATPases associated with a variety of cellular activities YE105_C2209 SM00382 ATPases associated with a variety of cellular activities YE105_C2219 SM00342 helix_turn_helix, arabinose operon control protein YE105_C2221 SM00900 YE105_C2221 YE105_C2223 SM00478 endonuclease III YE105_C2223 SM00525 YE105_C2223 YE105_C2225 SM00357 Cold shock protein domain YE105_C2225 SM00955 YE105_C2225 YE105_C2229 SM00420 helix_turn_helix, Deoxyribose operon repressor YE105_C2229 SM01134 YE105_C2229 YE105_C2231 SM01007 Class II Aldolase and Adducin N-terminal domain YE105_C2234 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family YE105_C2237 SM00530 Helix-turn-helix XRE-family like proteins YE105_C2239 SM00028 Tetratricopeptide repeats YE105_C2241 SM00014 Acid phosphatase homologues YE105_C2246 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YE105_C2246 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YE105_C2246 SM00493 YE105_C2246 YE105_C2249 SM00822 YE105_C2249 YE105_C2252 SM00363 S4 RNA-binding domain YE105_C2254 SM00481 DNA polymerase alpha chain like domain YE105_C2261 SM00749 bacterial OsmY and nodulation domain YE105_C2271 SM00052 Putative diguanylate phosphodiesterase YE105_C2272 SM00155 Phospholipase D. Active site motifs. YE105_C2274 SM00382 ATPases associated with a variety of cellular activities YE105_C2275 SM00382 ATPases associated with a variety of cellular activities YE105_C2284 SM00528 Domain in histone-like proteins of HNS family YE105_C2285 SM00984 UDP binding domain YE105_C2286 SM00448 cheY-homologous receiver domain YE105_C2295 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain YE105_C2295 SM00437 Bacterial DNA topoisomerase I DNA-binding domain YE105_C2295 SM00493 YE105_C2295 YE105_C2299 SM00870 YE105_C2299 YE105_C2304 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YE105_C2307 SM00763 PrkA AAA domain YE105_C2313 SM00052 Putative diguanylate phosphodiesterase YE105_C2313 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. YE105_C2313 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YE105_C2313 SM00091 PAS domain YE105_C2313 SM00267 diguanylate cyclase YE105_C2315 SM01005 Alanine racemase, C-terminal domain YE105_C2318 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C2325 SM00836 DALR anticodon binding domain YE105_C2325 SM01016 Arginyl tRNA synthetase N terminal dom YE105_C2341 SM00382 ATPases associated with a variety of cellular activities YE105_C2351 SM01007 Class II Aldolase and Adducin N-terminal domain YE105_C2353 SM00420 helix_turn_helix, Deoxyribose operon repressor YE105_C2353 SM01134 YE105_C2353 YE105_C2354 SM00387 Histidine kinase-like ATPases YE105_C2355 SM00448 cheY-homologous receiver domain YE105_C2363 SM00458 Ricin-type beta-trefoil YE105_C2366 SM00421 helix_turn_helix, Lux Regulon YE105_C2380 SM00479 YE105_C2380 YE105_C2383 SM01022 YE105_C2383 YE105_C2385 SM00487 DEAD-like helicases superfamily YE105_C2385 SM00490 helicase superfamily c-terminal domain YE105_C2391 SM01091 Transporter associated domain YE105_C2398 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YE105_C2398 SM00091 PAS domain YE105_C2398 SM00267 diguanylate cyclase YE105_C2403 SM00357 Cold shock protein domain YE105_C2412 SM00342 helix_turn_helix, arabinose operon control protein YE105_C2417 SM00382 ATPases associated with a variety of cellular activities YE105_C2418 SM00090 RIO-like kinase YE105_C2421 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YE105_C2421 SM00091 PAS domain YE105_C2421 SM00267 diguanylate cyclase YE105_C2425 SM00342 helix_turn_helix, arabinose operon control protein YE105_C2435 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YE105_C2435 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C2437 SM00354 helix_turn _helix lactose operon repressor YE105_C2438 SM00640 Glycosyl hydrolases family 32 YE105_C2445 SM01329 YE105_C2445 YE105_C2452 SM00448 cheY-homologous receiver domain YE105_C2452 SM00862 Transcriptional regulatory protein, C terminal YE105_C2453 SM00387 Histidine kinase-like ATPases YE105_C2453 SM00388 His Kinase A (phosphoacceptor) domain YE105_C2454 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. YE105_C2459 SM00382 ATPases associated with a variety of cellular activities YE105_C2461 SM00487 DEAD-like helicases superfamily YE105_C2461 SM00490 helicase superfamily c-terminal domain YE105_C2461 SM00982 YE105_C2461 YE105_C2461 SM01058 CarD-like/TRCF domain YE105_C2474 SM00382 ATPases associated with a variety of cellular activities YE105_C2482 SM00825 Beta-ketoacyl synthase YE105_C2484 SM00822 YE105_C2484 YE105_C2485 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. YE105_C2491 SM00363 S4 RNA-binding domain YE105_C2492 SM00316 Ribosomal protein S1-like RNA-binding domain YE105_C2498 SM00421 helix_turn_helix, Lux Regulon YE105_C2500 SM00450 Rhodanese Homology Domain YE105_C2502 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YE105_C2505 SM00387 Histidine kinase-like ATPases YE105_C2506 SM00421 helix_turn_helix, Lux Regulon YE105_C2506 SM00448 cheY-homologous receiver domain YE105_C2519 SM01091 Transporter associated domain YE105_C2521 SM00421 helix_turn_helix, Lux Regulon YE105_C2535 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase YE105_C2536 SM00992 Hemimethylated DNA-binding protein YccV like YE105_C2537 SM00881 CoA binding domain YE105_C2539 SM00851 MGS-like domain YE105_C2551 SM00825 Beta-ketoacyl synthase YE105_C2555 SM00382 ATPases associated with a variety of cellular activities YE105_C2556 SM00981 YE105_C2556 YE105_C2565 SM00052 Putative diguanylate phosphodiesterase YE105_C2566 SM00849 Metallo-beta-lactamase superfamily YE105_C2577 SM00357 Cold shock protein domain YE105_C2578 SM00357 Cold shock protein domain YE105_C2579 SM01150 YE105_C2579 YE105_C2581 SM00382 ATPases associated with a variety of cellular activities YE105_C2582 SM00849 Metallo-beta-lactamase superfamily YE105_C2583 SM00411 bacterial (prokaryotic) histone like domain YE105_C2584 SM00316 Ribosomal protein S1-like RNA-binding domain YE105_C2589 SM00870 YE105_C2589 YE105_C2596 SM00382 ATPases associated with a variety of cellular activities YE105_C2598 SM00843 YE105_C2598 YE105_C2599 SM00344 helix_turn_helix ASNC type YE105_C2601 SM00382 ATPases associated with a variety of cellular activities YE105_C2602 SM00382 ATPases associated with a variety of cellular activities YE105_C2604 SM00316 Ribosomal protein S1-like RNA-binding domain YE105_C2605 SM00382 ATPases associated with a variety of cellular activities YE105_C2605 SM01086 C-terminal, D2-small domain, of ClpB protein YE105_C2607 SM00357 Cold shock protein domain YE105_C2608 SM00382 ATPases associated with a variety of cellular activities YE105_C2621 SM00382 ATPases associated with a variety of cellular activities YE105_C2622 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C2622 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YE105_C2626 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C2626 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. YE105_C2631 SM00382 ATPases associated with a variety of cellular activities YE105_C2638 SM00014 Acid phosphatase homologues YE105_C2639 SM01133 YE105_C2639 YE105_C2640 SM00420 helix_turn_helix, Deoxyribose operon repressor YE105_C2640 SM01134 YE105_C2640 YE105_C2643 SM00936 Penicillin-binding protein 5, C-terminal domain YE105_C2644 SM00116 Domain in cystathionine beta-synthase and other proteins. YE105_C2647 SM00382 ATPases associated with a variety of cellular activities YE105_C2647 SM00930 YE105_C2647 YE105_C2653 SM00382 ATPases associated with a variety of cellular activities YE105_C2660 SM00518 AP endonuclease family 2 YE105_C2665 SM00862 Transcriptional regulatory protein, C terminal YE105_C2674 SM00841 Elongation factor P, C-terminal YE105_C2674 SM01185 YE105_C2674 YE105_C2678 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C2678 SM00895 YE105_C2678 YE105_C2680 SM00833 Cobalamin synthesis protein cobW C-terminal domain YE105_C2681 SM00014 Acid phosphatase homologues YE105_C2683 SM00052 Putative diguanylate phosphodiesterase YE105_C2687 SM00382 ATPases associated with a variety of cellular activities YE105_C2690 SM00363 S4 RNA-binding domain YE105_C2691 SM00487 DEAD-like helicases superfamily YE105_C2691 SM00490 helicase superfamily c-terminal domain YE105_C2703 SM01057 Eukaryotic-type carbonic anhydrase YE105_C2712 SM00530 Helix-turn-helix XRE-family like proteins YE105_C2715 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C2715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C2721 SM00387 Histidine kinase-like ATPases YE105_C2721 SM00388 His Kinase A (phosphoacceptor) domain YE105_C2722 SM00421 helix_turn_helix, Lux Regulon YE105_C2722 SM00448 cheY-homologous receiver domain YE105_C2723 SM00387 Histidine kinase-like ATPases YE105_C2723 SM00388 His Kinase A (phosphoacceptor) domain YE105_C2723 SM00448 cheY-homologous receiver domain YE105_C2724 SM00434 DNA Topoisomerase IV YE105_C2733 SM00852 Probable molybdopterin binding domain YE105_C2736 SM01060 YE105_C2736 YE105_C2738 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain YE105_C2762 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YE105_C2762 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YE105_C2763 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YE105_C2770 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YE105_C2777 SM00354 helix_turn _helix lactose operon repressor YE105_C2783 SM00052 Putative diguanylate phosphodiesterase YE105_C2786 SM00382 ATPases associated with a variety of cellular activities YE105_C2789 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C2798 SM00859 Semialdehyde dehydrogenase, NAD binding domain YE105_C2800 SM00342 helix_turn_helix, arabinose operon control protein YE105_C2803 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C2811 SM00354 helix_turn _helix lactose operon repressor YE105_C2818 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YE105_C2818 SM00091 PAS domain YE105_C2818 SM00267 diguanylate cyclase YE105_C2819 SM00825 Beta-ketoacyl synthase YE105_C2827 SM00463 Small MutS-related domain YE105_C2842 SM00382 ATPases associated with a variety of cellular activities YE105_C2849 SM00778 Zinc-binding domain of primase-helicase YE105_C2862 SM00354 helix_turn _helix lactose operon repressor YE105_C2863 SM00867 YceI-like domain YE105_C2867 SM00382 ATPases associated with a variety of cellular activities YE105_C2876 SM00382 ATPases associated with a variety of cellular activities YE105_C2884 SM00387 Histidine kinase-like ATPases YE105_C2885 SM00448 cheY-homologous receiver domain YE105_C2885 SM00850 LytTr DNA-binding domain YE105_C2899 SM00278 Helix-hairpin-helix DNA-binding motif class 1 YE105_C2899 SM00292 breast cancer carboxy-terminal domain YE105_C2899 SM00532 Ligase N family YE105_C2900 SM00771 ZipA, C-terminal domain (FtsZ-binding) YE105_C2906 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C2906 SM00387 Histidine kinase-like ATPases YE105_C2906 SM00388 His Kinase A (phosphoacceptor) domain YE105_C2907 SM00448 cheY-homologous receiver domain YE105_C2907 SM00862 Transcriptional regulatory protein, C terminal YE105_C2909 SM00382 ATPases associated with a variety of cellular activities YE105_C2911 SM00382 ATPases associated with a variety of cellular activities YE105_C2920 SM01130 YE105_C2920 YE105_C2929 SM00919 Malic enzyme, NAD binding domain YE105_C2929 SM01274 YE105_C2929 YE105_C2933 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YE105_C2936 SM00421 helix_turn_helix, Lux Regulon YE105_C2936 SM00448 cheY-homologous receiver domain YE105_C2957 SM01130 YE105_C2957 YE105_C2971 SM00382 ATPases associated with a variety of cellular activities YE105_C2977 SM00924 MgtE intracellular N domain YE105_C2978 SM00052 Putative diguanylate phosphodiesterase YE105_C2978 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) YE105_C2978 SM00091 PAS domain YE105_C2978 SM00267 diguanylate cyclase YE105_C2984 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C2984 SM00387 Histidine kinase-like ATPases YE105_C2984 SM00388 His Kinase A (phosphoacceptor) domain YE105_C2985 SM00448 cheY-homologous receiver domain YE105_C2985 SM00862 Transcriptional regulatory protein, C terminal YE105_C2988 SM00046 Diacylglycerol kinase catalytic domain (presumed) YE105_C2994 SM00420 helix_turn_helix, Deoxyribose operon repressor YE105_C2994 SM01134 YE105_C2994 YE105_C2995 SM00116 Domain in cystathionine beta-synthase and other proteins. YE105_C3008 SM00116 Domain in cystathionine beta-synthase and other proteins. YE105_C3008 SM01240 YE105_C3008 YE105_C3012 SM00382 ATPases associated with a variety of cellular activities YE105_C3013 SM00564 beta-propeller repeat YE105_C3017 SM00530 Helix-turn-helix XRE-family like proteins YE105_C3018 SM00028 Tetratricopeptide repeats YE105_C3020 SM00562 YE105_C3020 YE105_C3021 SM00247 Beta/gamma crystallins YE105_C3023 SM01359 YE105_C3023 YE105_C3023 SM01360 YE105_C3023 YE105_C3026 SM00869 Autotransporter beta-domain YE105_C3032 SM00271 DnaJ molecular chaperone homology domain YE105_C3051 SM00938 Nitrogen regulatory protein P-II YE105_C3053 SM00382 ATPases associated with a variety of cellular activities YE105_C3053 SM00448 cheY-homologous receiver domain YE105_C3055 SM00387 Histidine kinase-like ATPases YE105_C3055 SM00388 His Kinase A (phosphoacceptor) domain YE105_C3058 SM01211 YE105_C3058 YE105_C3059 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C3071 SM00358 Double-stranded RNA binding motif YE105_C3071 SM00535 Ribonuclease III family YE105_C3081 SM00487 DEAD-like helicases superfamily YE105_C3081 SM00490 helicase superfamily c-terminal domain YE105_C3084 SM00248 ankyrin repeats YE105_C3086 SM00986 Uracil DNA glycosylase superfamily YE105_C3086 SM00987 UreE urease accessory protein, C-terminal domain YE105_C3105 SM00382 ATPases associated with a variety of cellular activities YE105_C3111 SM00342 helix_turn_helix, arabinose operon control protein YE105_C3128 SM00988 UreE urease accessory protein, N-terminal domain YE105_C3132 SM00382 ATPases associated with a variety of cellular activities YE105_C3133 SM00382 ATPases associated with a variety of cellular activities YE105_C3139 SM00450 Rhodanese Homology Domain YE105_C3140 SM00357 Cold shock protein domain YE105_C3145 SM00342 helix_turn_helix, arabinose operon control protein YE105_C3147 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C3153 SM00382 ATPases associated with a variety of cellular activities YE105_C3156 SM00479 YE105_C3156 YE105_C3159 SM00849 Metallo-beta-lactamase superfamily YE105_C3160 SM00257 Lysin motif YE105_C3166 SM00825 Beta-ketoacyl synthase YE105_C3170 SM00194 Protein tyrosine phosphatase, catalytic domain YE105_C3170 SM00404 Protein tyrosine phosphatase, catalytic domain motif YE105_C3173 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YE105_C3174 SM00861 Transketolase, pyrimidine binding domain YE105_C3181 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor YE105_C3182 SM00731 SprT homologues. YE105_C3187 SM00732 Likely ribonuclease with RNase H fold. YE105_C3194 SM01152 YE105_C3194 YE105_C3196 SM00729 Elongator protein 3, MiaB family, Radical SAM YE105_C3201 SM00478 endonuclease III YE105_C3201 SM00525 YE105_C3201 YE105_C3224 SM00382 ATPases associated with a variety of cellular activities YE105_C3231 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C3234 SM00354 helix_turn _helix lactose operon repressor YE105_C3243 SM00052 Putative diguanylate phosphodiesterase YE105_C3243 SM00091 PAS domain YE105_C3243 SM00267 diguanylate cyclase YE105_C3271 SM00862 Transcriptional regulatory protein, C terminal YE105_C3285 SM00858 YE105_C3285 YE105_C3290 SM00382 ATPases associated with a variety of cellular activities YE105_C3295 SM00382 ATPases associated with a variety of cellular activities YE105_C3304 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C3310 SM00382 ATPases associated with a variety of cellular activities YE105_C3315 SM00382 ATPases associated with a variety of cellular activities YE105_C3321 SM00342 helix_turn_helix, arabinose operon control protein YE105_C3348 SM00342 helix_turn_helix, arabinose operon control protein YE105_C3351 SM00729 Elongator protein 3, MiaB family, Radical SAM YE105_C3353 SM00563 Phosphate acyltransferases YE105_C3354 SM00434 DNA Topoisomerase IV YE105_C3358 SM00387 Histidine kinase-like ATPases YE105_C3358 SM00433 TopoisomeraseII YE105_C3372 SM01118 YE105_C3372 YE105_C3373 SM00287 Bacterial SH3 domain homologues YE105_C3374 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. YE105_C3376 SM00905 Dihydroneopterin aldolase YE105_C3377 SM01207 YE105_C3377 YE105_C3380 SM00400 zinc finger YE105_C3380 SM00493 YE105_C3380 YE105_C3380 SM00766 DNA primase DnaG DnaB-binding YE105_C3398 SM00869 Autotransporter beta-domain YE105_C3400 SM00869 Autotransporter beta-domain YE105_C3406 SM00858 YE105_C3406 YE105_C3410 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C3410 SM00895 YE105_C3410 YE105_C3423 SM00829 Enoylreductase YE105_C3436 SM00749 bacterial OsmY and nodulation domain YE105_C3439 SM00073 Histidine Phosphotransfer domain YE105_C3439 SM00091 PAS domain YE105_C3439 SM00387 Histidine kinase-like ATPases YE105_C3439 SM00388 His Kinase A (phosphoacceptor) domain YE105_C3439 SM00448 cheY-homologous receiver domain YE105_C3440 SM00729 Elongator protein 3, MiaB family, Radical SAM YE105_C3452 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YE105_C3453 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. YE105_C3460 SM00382 ATPases associated with a variety of cellular activities YE105_C3466 SM00382 ATPases associated with a variety of cellular activities YE105_C3478 SM00460 Transglutaminase/protease-like homologues YE105_C3480 SM00642 Alpha-amylase domain YE105_C3482 SM00354 helix_turn _helix lactose operon repressor YE105_C3483 SM00831 Cation transporter/ATPase, N-terminus YE105_C3523 SM00316 Ribosomal protein S1-like RNA-binding domain YE105_C3528 SM00052 Putative diguanylate phosphodiesterase YE105_C3528 SM00267 diguanylate cyclase YE105_C3529 SM00829 Enoylreductase YE105_C3534 SM00878 Biotin carboxylase C-terminal domain YE105_C3540 SM00267 diguanylate cyclase YE105_C3542 SM00357 Cold shock protein domain YE105_C3543 SM00357 Cold shock protein domain YE105_C3548 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C3551 SM00382 ATPases associated with a variety of cellular activities YE105_C3558 SM00530 Helix-turn-helix XRE-family like proteins YE105_C3565 SM01005 Alanine racemase, C-terminal domain YE105_C3566 SM00382 ATPases associated with a variety of cellular activities YE105_C3567 SM00829 Enoylreductase YE105_C3577 SM00563 Phosphate acyltransferases YE105_C3583 SM00382 ATPases associated with a variety of cellular activities YE105_C3592 SM00912 haemagglutination activity domain YE105_C3593 SM01018 B12 binding domain YE105_C3594 SM00346 helix_turn_helix isocitrate lyase regulation YE105_C3613 SM00422 helix_turn_helix, mercury resistance YE105_C3616 SM00662 RNA polymerases D YE105_C3617 SM00363 S4 RNA-binding domain YE105_C3617 SM01390 YE105_C3617 YE105_C3629 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. YE105_C3630 SM01374 YE105_C3630 YE105_C3633 SM00322 K homology RNA-binding domain YE105_C3636 SM01382 YE105_C3636 YE105_C3636 SM01383 YE105_C3636 YE105_C3640 SM01403 YE105_C3640 YE105_C3644 SM00838 Elongation factor G C-terminus YE105_C3644 SM00889 Elongation factor G, domain IV YE105_C3657 SM00382 ATPases associated with a variety of cellular activities YE105_C3662 SM00382 ATPases associated with a variety of cellular activities YE105_C3663 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C3670 SM00100 Cyclic nucleotide-monophosphate binding domain YE105_C3670 SM00419 helix_turn_helix, cAMP Regulatory protein YE105_C3674 SM00382 ATPases associated with a variety of cellular activities YE105_C3677 SM00354 helix_turn _helix lactose operon repressor YE105_C3700 SM00363 S4 RNA-binding domain YE105_C3705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C3705 SM00387 Histidine kinase-like ATPases YE105_C3705 SM00388 His Kinase A (phosphoacceptor) domain YE105_C3706 SM00448 cheY-homologous receiver domain YE105_C3706 SM00862 Transcriptional regulatory protein, C terminal YE105_C3712 SM00316 Ribosomal protein S1-like RNA-binding domain YE105_C3712 SM00732 Likely ribonuclease with RNase H fold. YE105_C3713 SM00899 YE105_C3713 YE105_C3722 SM00421 helix_turn_helix, Lux Regulon YE105_C3724 SM00450 Rhodanese Homology Domain YE105_C3726 SM00420 helix_turn_helix, Deoxyribose operon repressor YE105_C3726 SM01134 YE105_C3726 YE105_C3731 SM00642 Alpha-amylase domain YE105_C3732 SM00642 Alpha-amylase domain YE105_C3737 SM00859 Semialdehyde dehydrogenase, NAD binding domain YE105_C3741 SM00354 helix_turn _helix lactose operon repressor YE105_C3771 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YE105_C3772 SM00235 Zinc-dependent metalloprotease YE105_C3777 SM00869 Autotransporter beta-domain YE105_C3781 SM00052 Putative diguanylate phosphodiesterase YE105_C3789 SM00052 Putative diguanylate phosphodiesterase YE105_C3790 SM00028 Tetratricopeptide repeats YE105_C3799 SM00382 ATPases associated with a variety of cellular activities YE105_C3800 SM00382 ATPases associated with a variety of cellular activities YE105_C3808 SM00421 helix_turn_helix, Lux Regulon YE105_C3808 SM00448 cheY-homologous receiver domain YE105_C3809 SM00387 Histidine kinase-like ATPases YE105_C3812 SM00912 haemagglutination activity domain YE105_C3814 SM00912 haemagglutination activity domain YE105_C3823 SM00354 helix_turn _helix lactose operon repressor YE105_C3839 SM00382 ATPases associated with a variety of cellular activities YE105_C3846 SM00342 helix_turn_helix, arabinose operon control protein YE105_C3848 SM00382 ATPases associated with a variety of cellular activities YE105_C3854 SM00342 helix_turn_helix, arabinose operon control protein YE105_C3863 SM00926 Molybdopterin oxidoreductase Fe4S4 domain YE105_C3867 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C3867 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C3867 SM01358 YE105_C3867 YE105_C3870 SM00966 SpoVT / AbrB like domain YE105_C3872 SM00345 helix_turn_helix gluconate operon transcriptional repressor YE105_C3888 SM00642 Alpha-amylase domain YE105_C3898 SM00387 Histidine kinase-like ATPases YE105_C3898 SM00433 TopoisomeraseII YE105_C3900 SM00480 DNA polymerase III beta subunit YE105_C3901 SM00382 ATPases associated with a variety of cellular activities YE105_C3901 SM00760 Bacterial dnaA protein helix-turn-helix domain YE105_C3904 SM01234 YE105_C3904 YE105_C3909 SM00382 ATPases associated with a variety of cellular activities YE105_C3909 SM00930 YE105_C3909 YE105_C3911 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). YE105_C3911 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain YE105_C3913 SM00387 Histidine kinase-like ATPases YE105_C3913 SM00388 His Kinase A (phosphoacceptor) domain YE105_C3914 SM00421 helix_turn_helix, Lux Regulon YE105_C3914 SM00448 cheY-homologous receiver domain YE105_C3920 SM00062 Bacterial periplasmic substrate-binding proteins YE105_C3923 SM00382 ATPases associated with a variety of cellular activities YE105_C3930 SM00382 ATPases associated with a variety of cellular activities YE105_C3939 SM01228 YE105_C3939 YE105_P0007 SM00364 Leucine-rich repeats, bacterial type YE105_P0022 SM00382 ATPases associated with a variety of cellular activities YE105_P0031 SM00342 helix_turn_helix, arabinose operon control protein YE105_P0046 SM00194 Protein tyrosine phosphatase, catalytic domain YE105_P0046 SM00404 Protein tyrosine phosphatase, catalytic domain motif YE105_P0055 SM00470 ParB-like nuclease domain YE105_P0068 SM00857 Resolvase, N terminal domain YE105_P0071 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor YE105_P0078 SM00155 Phospholipase D. Active site motifs. YE105_P0083 SM00220 Serine/Threonine protein kinases, catalytic domain