locus-tag class description YEY1_00005 PF11638 DnaA N-terminal domain YEY1_00005 PF08299 Bacterial dnaA protein helix-turn-helix YEY1_00005 PF00308 Bacterial dnaA protein YEY1_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain YEY1_00010 PF02767 DNA polymerase III beta subunit, central domain YEY1_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain YEY1_00015 PF02463 RecF/RecN/SMC N terminal domain YEY1_00020 PF00986 DNA gyrase B subunit, carboxyl terminus YEY1_00020 PF00204 DNA gyrase B YEY1_00020 PF01751 Toprim domain YEY1_00020 PF18053 DNA gyrase B subunit insert domain YEY1_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_00030 PF02423 Ornithine cyclodeaminase/mu-crystallin family YEY1_00040 PF07676 WD40-like Beta Propeller Repeat YEY1_00040 PF12566 Protein of unknown function (DUF3748) YEY1_00045 PF07119 Protein of unknown function (DUF1375) YEY1_00050 PF00011 Hsp20/alpha crystallin family YEY1_00055 PF00011 Hsp20/alpha crystallin family YEY1_00065 PF06826 Predicted Permease Membrane Region YEY1_00065 PF02080 TrkA-C domain YEY1_00070 PF00155 Aminotransferase class I and II YEY1_00075 PF00128 Alpha amylase, catalytic domain YEY1_00080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YEY1_00080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YEY1_00085 PF07690 Major Facilitator Superfamily YEY1_00110 PF00583 Acetyltransferase (GNAT) family YEY1_00115 PF03352 Methyladenine glycosylase YEY1_00120 PF02091 Glycyl-tRNA synthetase alpha subunit YEY1_00125 PF05746 DALR anticodon binding domain YEY1_00125 PF02092 Glycyl-tRNA synthetase beta subunit YEY1_00130 PF11254 Protein of unknown function (DUF3053) YEY1_00140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YEY1_00140 PF02378 Phosphotransferase system, EIIC YEY1_00140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YEY1_00145 PF08125 Mannitol dehydrogenase C-terminal domain YEY1_00145 PF01232 Mannitol dehydrogenase Rossmann domain YEY1_00150 PF05068 Mannitol repressor YEY1_00160 PF00155 Aminotransferase class I and II YEY1_00160 PF00392 Bacterial regulatory proteins, gntR family YEY1_00165 PF10928 Protein of unknown function (DUF2810) YEY1_00170 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin YEY1_00175 PF01850 PIN domain YEY1_00180 PF03473 MOSC domain YEY1_00180 PF03475 3-alpha domain YEY1_00185 PF00672 HAMP domain YEY1_00185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YEY1_00185 PF02203 Tar ligand binding domain homologue YEY1_00195 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YEY1_00195 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YEY1_00200 PF02634 FdhD/NarQ family YEY1_00205 PF01568 Molydopterin dinucleotide binding domain YEY1_00205 PF00384 Molybdopterin oxidoreductase YEY1_00205 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YEY1_00210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YEY1_00210 PF00384 Molybdopterin oxidoreductase YEY1_00210 PF01568 Molydopterin dinucleotide binding domain YEY1_00215 PF13247 4Fe-4S dicluster domain YEY1_00215 PF09163 Formate dehydrogenase N, transmembrane YEY1_00220 PF01292 Prokaryotic cytochrome b561 YEY1_00225 PF04216 Protein involved in formate dehydrogenase formation YEY1_00230 PF03841 L-seryl-tRNA selenium transferase YEY1_00230 PF12390 Selenocysteine synthase N terminal YEY1_00235 PF00009 Elongation factor Tu GTP binding domain YEY1_00235 PF09107 Elongation factor SelB, winged helix YEY1_00235 PF03144 Elongation factor Tu domain 2 YEY1_00235 PF09106 Elongation factor SelB, winged helix YEY1_00240 PF07690 Major Facilitator Superfamily YEY1_00245 PF01757 Acyltransferase family YEY1_00260 PF02753 Pili assembly chaperone PapD, C-terminal domain YEY1_00260 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YEY1_00265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YEY1_00265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YEY1_00275 PF13407 Periplasmic binding protein domain YEY1_00280 PF00005 ABC transporter YEY1_00285 PF02653 Branched-chain amino acid transport system / permease component YEY1_00295 PF14659 Phage integrase, N-terminal SAM-like domain YEY1_00295 PF00589 Phage integrase family YEY1_00295 PF13356 Arm DNA-binding domain YEY1_00305 PF04606 Ogr/Delta-like zinc finger YEY1_00330 PF01695 IstB-like ATP binding protein YEY1_00340 PF00324 Amino acid permease YEY1_00345 PF00221 Aromatic amino acid lyase YEY1_00350 PF01175 Urocanase Rossmann-like domain YEY1_00350 PF17391 Urocanase N-terminal domain YEY1_00350 PF17392 Urocanase C-terminal domain YEY1_00360 PF00577 Outer membrane usher protein YEY1_00360 PF13953 PapC C-terminal domain YEY1_00360 PF13954 PapC N-terminal domain YEY1_00375 PF01238 Phosphomannose isomerase type I YEY1_00380 PF00232 Glycosyl hydrolase family 1 YEY1_00395 PF02378 Phosphotransferase system, EIIC YEY1_00400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YEY1_00405 PF02378 Phosphotransferase system, EIIC YEY1_00410 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit YEY1_00415 PF00480 ROK family YEY1_00420 PF00356 Bacterial regulatory proteins, lacI family YEY1_00435 PF06755 CbtA_toxin of type IV toxin-antitoxin system YEY1_00440 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A YEY1_00445 PF00872 Transposase, Mutator family YEY1_00450 PF12146 Serine aminopeptidase, S33 YEY1_00455 PF04829 Pre-toxin domain with VENN motif YEY1_00455 PF05860 haemagglutination activity domain YEY1_00455 PF13332 Hemagglutinin repeat YEY1_00455 PF13018 Extended Signal Peptide of Type V secretion system YEY1_00460 PF08479 POTRA domain, ShlB-type YEY1_00460 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YEY1_00460 PF17287 POTRA domain YEY1_00470 PF13018 Extended Signal Peptide of Type V secretion system YEY1_00470 PF02661 Fic/DOC family YEY1_00470 PF13332 Hemagglutinin repeat YEY1_00470 PF05860 haemagglutination activity domain YEY1_00470 PF03543 Yersinia/Haemophilus virulence surface antigen YEY1_00480 PF07690 Major Facilitator Superfamily YEY1_00485 PF05231 MASE1 YEY1_00485 PF07730 Histidine kinase YEY1_00485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_00490 PF00072 Response regulator receiver domain YEY1_00490 PF00196 Bacterial regulatory proteins, luxR family YEY1_00495 PF00884 Sulfatase YEY1_00495 PF08019 Phosphoethanolamine transferase EptA/EptB YEY1_00500 PF02566 OsmC-like protein YEY1_00515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YEY1_00520 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_00525 PF12911 N-terminal TM domain of oligopeptide transport permease C YEY1_00525 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_00530 PF00005 ABC transporter YEY1_00530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YEY1_00535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YEY1_00535 PF00005 ABC transporter YEY1_00540 PF11658 Cellulose biosynthesis protein BcsG YEY1_00545 PF11120 Cellulose biosynthesis protein BcsF YEY1_00550 PF10995 Cellulose biosynthesis GIL YEY1_00560 PF06564 Cellulose biosynthesis protein BcsQ YEY1_00565 PF03552 Cellulose synthase YEY1_00565 PF07238 PilZ domain YEY1_00565 PF00535 Glycosyl transferase family 2 YEY1_00570 PF03170 Bacterial cellulose synthase subunit YEY1_00575 PF01270 Glycosyl hydrolases family 8 YEY1_00590 PF00563 EAL domain YEY1_00590 PF17154 Gammaproteobacterial periplasmic sensor domain YEY1_00590 PF00990 Diguanylate cyclase, GGDEF domain YEY1_00590 PF00672 HAMP domain YEY1_00595 PF06178 Oligogalacturonate-specific porin protein (KdgM) YEY1_00600 PF06917 Periplasmic pectate lyase YEY1_00610 PF00375 Sodium:dicarboxylate symporter family YEY1_00615 PF05193 Peptidase M16 inactive domain YEY1_00615 PF00675 Insulinase (Peptidase family M16) YEY1_00625 PF00294 pfkB family carbohydrate kinase YEY1_00630 PF01361 Tautomerase enzyme YEY1_00635 PF00563 EAL domain YEY1_00640 PF05170 AsmA family YEY1_00645 PF02611 CDP-diacylglycerol pyrophosphatase YEY1_00650 PF03631 Virulence factor BrkB YEY1_00655 PF03797 Autotransporter beta-domain YEY1_00670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YEY1_00670 PF07992 Pyridine nucleotide-disulphide oxidoreductase YEY1_00680 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ YEY1_00685 PF01432 Peptidase family M3 YEY1_00690 PF04445 Putative SAM-dependent methyltransferase YEY1_00695 PF00413 Matrixin YEY1_00695 PF08548 Peptidase M10 serralysin C terminal YEY1_00695 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) YEY1_00700 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YEY1_00700 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase YEY1_00705 PF00582 Universal stress protein family YEY1_00710 PF10625 Universal stress protein B (UspB) YEY1_00715 PF01384 Phosphate transporter family YEY1_00740 PF05034 Methylaspartate ammonia-lyase N-terminus YEY1_00740 PF07476 Methylaspartate ammonia-lyase C-terminus YEY1_00745 PF06368 Methylaspartate mutase E chain (MutE) YEY1_00750 PF13941 MutL protein YEY1_00755 PF02310 B12 binding domain YEY1_00760 PF00288 GHMP kinases N terminal domain YEY1_00765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YEY1_00765 PF14824 Sirohaem biosynthesis protein central YEY1_00765 PF10414 Sirohaem synthase dimerisation region YEY1_00770 PF03466 LysR substrate binding domain YEY1_00770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_00775 PF05683 Fumarase C-terminus YEY1_00775 PF05681 Fumarate hydratase (Fumerase) YEY1_00780 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YEY1_00795 PF03466 LysR substrate binding domain YEY1_00795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_00800 PF07690 Major Facilitator Superfamily YEY1_00805 PF00171 Aldehyde dehydrogenase family YEY1_00810 PF04962 KduI/IolB family YEY1_00820 PF00294 pfkB family carbohydrate kinase YEY1_00825 PF00205 Thiamine pyrophosphate enzyme, central domain YEY1_00825 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YEY1_00825 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YEY1_00830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YEY1_00830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YEY1_00835 PF01261 Xylose isomerase-like TIM barrel YEY1_00840 PF00583 Acetyltransferase (GNAT) family YEY1_00845 PF17954 Quercetinase C-terminal cupin domain YEY1_00845 PF02678 Pirin YEY1_00850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YEY1_00850 PF00356 Bacterial regulatory proteins, lacI family YEY1_00855 PF02447 GntP family permease YEY1_00860 PF01202 Shikimate kinase YEY1_00865 PF01914 MarC family integral membrane protein YEY1_00870 PF01118 Semialdehyde dehydrogenase, NAD binding domain YEY1_00870 PF02774 Semialdehyde dehydrogenase, dimerisation domain YEY1_00875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YEY1_00875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YEY1_00875 PF00205 Thiamine pyrophosphate enzyme, central domain YEY1_00880 PF03306 Alpha-acetolactate decarboxylase YEY1_00885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_00885 PF03466 LysR substrate binding domain YEY1_00890 PF06580 Histidine kinase YEY1_00890 PF07694 5TMR of 5TMR-LYT YEY1_00895 PF00128 Alpha amylase, catalytic domain YEY1_00895 PF02806 Alpha amylase, C-terminal all-beta domain YEY1_00895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YEY1_00900 PF00128 Alpha amylase, catalytic domain YEY1_00900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) YEY1_00900 PF18390 Glycogen debranching enzyme C-terminal domain YEY1_00905 PF00483 Nucleotidyl transferase YEY1_00915 PF08323 Starch synthase catalytic domain YEY1_00915 PF00534 Glycosyl transferases group 1 YEY1_00920 PF00343 Carbohydrate phosphorylase YEY1_00925 PF16901 C-terminal domain of alpha-glycerophosphate oxidase YEY1_00925 PF01266 FAD dependent oxidoreductase YEY1_00940 PF08220 DeoR-like helix-turn-helix domain YEY1_00940 PF00455 DeoR C terminal sensor domain YEY1_00945 PF01694 Rhomboid family YEY1_00945 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease YEY1_00950 PF00581 Rhodanese-like domain YEY1_00960 PF00196 Bacterial regulatory proteins, luxR family YEY1_00960 PF17874 MalT-like TPR region YEY1_00965 PF00343 Carbohydrate phosphorylase YEY1_00970 PF02446 4-alpha-glucanotransferase YEY1_00980 PF01521 Iron-sulphur cluster biosynthesis YEY1_00980 PF01106 NifU-like domain YEY1_00985 PF00156 Phosphoribosyl transferase domain YEY1_00995 PF00561 alpha/beta hydrolase fold YEY1_01000 PF07338 Protein of unknown function (DUF1471) YEY1_01005 PF09012 FeoC like transcriptional regulator YEY1_01010 PF07670 Nucleoside recognition YEY1_01010 PF02421 Ferrous iron transport protein B YEY1_01010 PF17910 FeoB cytosolic helical domain YEY1_01010 PF07664 Ferrous iron transport protein B C terminus YEY1_01015 PF04023 FeoA domain YEY1_01020 PF00575 S1 RNA binding domain YEY1_01020 PF09371 Tex-like protein N-terminal domain YEY1_01020 PF17674 HHH domain YEY1_01020 PF16921 Tex protein YqgF-like domain YEY1_01045 PF01272 Transcription elongation factor, GreA/GreB, C-term YEY1_01045 PF03449 Transcription elongation factor, N-terminal YEY1_01050 PF00486 Transcriptional regulatory protein, C terminal YEY1_01050 PF00072 Response regulator receiver domain YEY1_01055 PF00672 HAMP domain YEY1_01055 PF00512 His Kinase A (phospho-acceptor) domain YEY1_01055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_01065 PF01293 Phosphoenolpyruvate carboxykinase YEY1_01070 PF01430 Hsp33 protein YEY1_01075 PF01479 S4 domain YEY1_01080 PF13419 Haloacid dehalogenase-like hydrolase YEY1_01085 PF07095 Intracellular growth attenuator protein IgaA YEY1_01090 PF00293 NUDIX domain YEY1_01095 PF00912 Transglycosylase YEY1_01095 PF00905 Penicillin binding protein transpeptidase domain YEY1_01095 PF17092 Penicillin-binding protein OB-like domain YEY1_01120 PF00263 Bacterial type II and III secretion system protein YEY1_01120 PF03958 Bacterial type II/III secretion system short domain YEY1_01125 PF01202 Shikimate kinase YEY1_01130 PF01761 3-dehydroquinate synthase YEY1_01135 PF05036 Sporulation related domain YEY1_01140 PF02086 D12 class N6 adenine-specific DNA methyltransferase YEY1_01145 PF00834 Ribulose-phosphate 3 epimerase family YEY1_01150 PF13419 Haloacid dehalogenase-like hydrolase YEY1_01155 PF00579 tRNA synthetases class I (W and Y) YEY1_01160 PF10414 Sirohaem synthase dimerisation region YEY1_01160 PF14824 Sirohaem biosynthesis protein central YEY1_01160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YEY1_01165 PF01226 Formate/nitrite transporter YEY1_01170 PF13806 Rieske-like [2Fe-2S] domain YEY1_01175 PF04324 BFD-like [2Fe-2S] binding domain YEY1_01175 PF18267 Rubredoxin NAD+ reductase C-terminal domain YEY1_01175 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YEY1_01175 PF07992 Pyridine nucleotide-disulphide oxidoreductase YEY1_01175 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YEY1_01180 PF07969 Amidohydrolase family YEY1_01185 PF07690 Major Facilitator Superfamily YEY1_01190 PF00356 Bacterial regulatory proteins, lacI family YEY1_01195 PF11975 Family 4 glycosyl hydrolase C-terminal domain YEY1_01195 PF02056 Family 4 glycosyl hydrolase YEY1_01200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YEY1_01205 PF05872 Bacterial protein of unknown function (DUF853) YEY1_01210 PF00117 Glutamine amidotransferase class-I YEY1_01215 PF00202 Aminotransferase class-III YEY1_01220 PF12805 FUSC-like inner membrane protein yccS YEY1_01230 PF13545 Crp-like helix-turn-helix domain YEY1_01230 PF00027 Cyclic nucleotide-binding domain YEY1_01235 PF02566 OsmC-like protein YEY1_01240 PF00485 Phosphoribulokinase / Uridine kinase family YEY1_01245 PF06794 Uncharacterised protein family (UPF0270) YEY1_01250 PF00561 alpha/beta hydrolase fold YEY1_01255 PF01810 LysE type translocator YEY1_01260 PF02567 Phenazine biosynthesis-like protein YEY1_01265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YEY1_01270 PF00005 ABC transporter YEY1_01275 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_01280 PF02668 Taurine catabolism dioxygenase TauD, TfdA family YEY1_01290 PF00535 Glycosyl transferase family 2 YEY1_01295 PF12848 ABC transporter YEY1_01295 PF00005 ABC transporter YEY1_01300 PF02525 Flavodoxin-like fold YEY1_01305 PF00999 Sodium/hydrogen exchanger family YEY1_01305 PF02254 TrkA-N domain YEY1_01310 PF09526 Probable metal-binding protein (DUF2387) YEY1_01315 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YEY1_01320 PF04102 SlyX YEY1_01325 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YEY1_01325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YEY1_01330 PF13309 HTH domain YEY1_01330 PF08348 YheO-like PAS domain YEY1_01335 PF02635 DsrE/DsrF-like family YEY1_01340 PF02635 DsrE/DsrF-like family YEY1_01345 PF04077 DsrH like protein YEY1_01350 PF00164 Ribosomal protein S12/S23 YEY1_01355 PF00177 Ribosomal protein S7p/S5e YEY1_01360 PF00679 Elongation factor G C-terminus YEY1_01360 PF14492 Elongation Factor G, domain II YEY1_01360 PF03764 Elongation factor G, domain IV YEY1_01360 PF00009 Elongation factor Tu GTP binding domain YEY1_01360 PF03144 Elongation factor Tu domain 2 YEY1_01370 PF03143 Elongation factor Tu C-terminal domain YEY1_01370 PF03144 Elongation factor Tu domain 2 YEY1_01370 PF00009 Elongation factor Tu GTP binding domain YEY1_01375 PF04324 BFD-like [2Fe-2S] binding domain YEY1_01380 PF00210 Ferritin-like domain YEY1_01385 PF00338 Ribosomal protein S10p/S20e YEY1_01390 PF00297 Ribosomal protein L3 YEY1_01395 PF00573 Ribosomal protein L4/L1 family YEY1_01400 PF00276 Ribosomal protein L23 YEY1_01405 PF03947 Ribosomal Proteins L2, C-terminal domain YEY1_01405 PF00181 Ribosomal Proteins L2, RNA binding domain YEY1_01410 PF00203 Ribosomal protein S19 YEY1_01415 PF00237 Ribosomal protein L22p/L17e YEY1_01420 PF07650 KH domain YEY1_01420 PF00189 Ribosomal protein S3, C-terminal domain YEY1_01425 PF00252 Ribosomal protein L16p/L10e YEY1_01430 PF00831 Ribosomal L29 protein YEY1_01435 PF00366 Ribosomal protein S17 YEY1_01440 PF00238 Ribosomal protein L14p/L23e YEY1_01445 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 YEY1_01445 PF00467 KOW motif YEY1_01450 PF00281 Ribosomal protein L5 YEY1_01450 PF00673 ribosomal L5P family C-terminus YEY1_01455 PF00253 Ribosomal protein S14p/S29e YEY1_01460 PF00410 Ribosomal protein S8 YEY1_01465 PF00347 Ribosomal protein L6 YEY1_01470 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast YEY1_01475 PF03719 Ribosomal protein S5, C-terminal domain YEY1_01475 PF00333 Ribosomal protein S5, N-terminal domain YEY1_01480 PF00327 Ribosomal protein L30p/L7e YEY1_01485 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A YEY1_01490 PF00344 SecY translocase YEY1_01495 PF00444 Ribosomal protein L36 YEY1_01500 PF00416 Ribosomal protein S13/S18 YEY1_01505 PF00411 Ribosomal protein S11 YEY1_01510 PF00163 Ribosomal protein S4/S9 N-terminal domain YEY1_01510 PF01479 S4 domain YEY1_01515 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain YEY1_01515 PF01000 RNA polymerase Rpb3/RpoA insert domain YEY1_01515 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain YEY1_01520 PF01196 Ribosomal protein L17 YEY1_01525 PF09350 Domain of unknown function (DUF1992) YEY1_01530 PF13411 MerR HTH family regulatory protein YEY1_01535 PF03889 Alternative ribosome-rescue factor A YEY1_01545 PF01741 Large-conductance mechanosensitive channel, MscL YEY1_01550 PF02080 TrkA-C domain YEY1_01550 PF02254 TrkA-N domain YEY1_01555 PF01029 NusB family YEY1_01555 PF01189 16S rRNA methyltransferase RsmB/F YEY1_01565 PF02911 Formyl transferase, C-terminal domain YEY1_01565 PF00551 Formyl transferase YEY1_01570 PF01327 Polypeptide deformylase YEY1_01575 PF02481 DNA recombination-mediator protein A YEY1_01575 PF17782 DprA winged helix domain YEY1_01580 PF04361 Protein of unknown function (DUF494) YEY1_01585 PF01396 Topoisomerase DNA binding C4 zinc finger YEY1_01590 PF01300 Telomere recombination YEY1_01595 PF01488 Shikimate / quinate 5-dehydrogenase YEY1_01595 PF18317 Shikimate 5'-dehydrogenase C-terminal domain YEY1_01595 PF08501 Shikimate dehydrogenase substrate binding domain YEY1_01600 PF00132 Bacterial transferase hexapeptide (six repeats) YEY1_01645 PF00474 Sodium:solute symporter family YEY1_01650 PF04341 Protein of unknown function, DUF485 YEY1_01655 PF13193 AMP-binding enzyme C-terminal domain YEY1_01655 PF00501 AMP-binding enzyme YEY1_01655 PF16177 Acetyl-coenzyme A synthetase N-terminus YEY1_01660 PF00375 Sodium:dicarboxylate symporter family YEY1_01665 PF00072 Response regulator receiver domain YEY1_01665 PF00196 Bacterial regulatory proteins, luxR family YEY1_01710 PF04888 Secretion system effector C (SseC) like family YEY1_01735 PF14525 AraC-binding-like domain YEY1_01735 PF12833 Helix-turn-helix domain YEY1_01755 PF01514 Secretory protein of YscJ/FliF family YEY1_01775 PF00771 FHIPEP family YEY1_01780 PF18269 T3SS EscN ATPase C-terminal domain YEY1_01780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YEY1_01795 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YEY1_01800 PF00813 FliP family YEY1_01805 PF01313 Bacterial export proteins, family 3 YEY1_01815 PF01312 FlhB HrpN YscU SpaS Family YEY1_01820 PF04143 Sulphur transport YEY1_01825 PF04143 Sulphur transport YEY1_01830 PF01206 Sulfurtransferase TusA YEY1_01845 PF04773 FecR protein YEY1_01845 PF16220 Domain of unknown function (DUF4880) YEY1_01850 PF07715 TonB-dependent Receptor Plug Domain YEY1_01855 PF06472 ABC transporter transmembrane region 2 YEY1_01855 PF00005 ABC transporter YEY1_01860 PF00675 Insulinase (Peptidase family M16) YEY1_01860 PF05193 Peptidase M16 inactive domain YEY1_01865 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system YEY1_01870 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system YEY1_01875 PF00924 Mechanosensitive ion channel YEY1_01875 PF12794 Mechanosensitive ion channel inner membrane domain 1 YEY1_01875 PF12795 Mechanosensitive ion channel porin domain YEY1_01880 PF07715 TonB-dependent Receptor Plug Domain YEY1_01880 PF00593 TonB dependent receptor YEY1_01890 PF00392 Bacterial regulatory proteins, gntR family YEY1_01890 PF00155 Aminotransferase class I and II YEY1_01895 PF00005 ABC transporter YEY1_01900 PF01032 FecCD transport family YEY1_01905 PF01497 Periplasmic binding protein YEY1_01910 PF05171 Haemin-degrading HemS.ChuX domain YEY1_01915 PF07715 TonB-dependent Receptor Plug Domain YEY1_01915 PF00593 TonB dependent receptor YEY1_01920 PF10636 Hemin uptake protein hemP YEY1_01930 PF06228 Haem utilisation ChuX/HutX YEY1_01935 PF04055 Radical SAM superfamily YEY1_01940 PF00291 Pyridoxal-phosphate dependent enzyme YEY1_01945 PF01490 Transmembrane amino acid transporter protein YEY1_01950 PF00871 Acetokinase family YEY1_01955 PF02901 Pyruvate formate lyase-like YEY1_01955 PF01228 Glycine radical YEY1_01970 PF02595 Glycerate kinase family YEY1_01975 PF02683 Cytochrome C biogenesis protein transmembrane region YEY1_01975 PF11412 Disulphide bond corrector protein DsbC YEY1_01980 PF03091 CutA1 divalent ion tolerance protein YEY1_01985 PF03605 Anaerobic c4-dicarboxylate membrane transporter YEY1_01990 PF00206 Lyase YEY1_01990 PF10415 Fumarase C C-terminus YEY1_01995 PF04186 FxsA cytoplasmic membrane protein YEY1_02000 PF00166 Chaperonin 10 Kd subunit YEY1_02005 PF00118 TCP-1/cpn60 chaperonin family YEY1_02015 PF13698 Domain of unknown function (DUF4156) YEY1_02020 PF04055 Radical SAM superfamily YEY1_02025 PF08207 Elongation factor P (EF-P) KOW-like domain YEY1_02025 PF01132 Elongation factor P (EF-P) OB domain YEY1_02025 PF09285 Elongation factor P, C-terminal YEY1_02030 PF08085 Entericidin EcnA/B family YEY1_02035 PF00893 Small Multidrug Resistance protein YEY1_02040 PF08212 Lipocalin-like domain YEY1_02045 PF02313 Fumarate reductase subunit D YEY1_02050 PF02300 Fumarate reductase subunit C YEY1_02055 PF13183 4Fe-4S dicluster domain YEY1_02055 PF13085 2Fe-2S iron-sulfur cluster binding domain YEY1_02060 PF00890 FAD binding domain YEY1_02060 PF02910 Fumarate reductase flavoprotein C-term YEY1_02065 PF00152 tRNA synthetases class II (D, K and N) YEY1_02070 PF00924 Mechanosensitive ion channel YEY1_02070 PF12795 Mechanosensitive ion channel porin domain YEY1_02070 PF12794 Mechanosensitive ion channel inner membrane domain 1 YEY1_02075 PF02666 Phosphatidylserine decarboxylase YEY1_02080 PF03193 RsgA GTPase YEY1_02085 PF00929 Exonuclease YEY1_02105 PF08331 Domain of unknown function (DUF1730) YEY1_02110 PF01256 Carbohydrate kinase YEY1_02110 PF03853 YjeF-related protein N-terminus YEY1_02115 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE YEY1_02120 PF01520 N-acetylmuramoyl-L-alanine amidase YEY1_02125 PF08676 MutL C terminal dimerisation domain YEY1_02125 PF01119 DNA mismatch repair protein, C-terminal domain YEY1_02135 PF17209 Hfq protein YEY1_02140 PF13167 GTP-binding GTPase N-terminal YEY1_02140 PF01926 50S ribosome-binding GTPase YEY1_02140 PF16360 GTP-binding GTPase Middle Region YEY1_02145 PF01145 SPFH domain / Band 7 family YEY1_02145 PF12221 Bacterial membrane protein N terminal YEY1_02150 PF01145 SPFH domain / Band 7 family YEY1_02155 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) YEY1_02160 PF00709 Adenylosuccinate synthetase YEY1_02165 PF02082 Transcriptional regulator YEY1_02170 PF00773 RNB domain YEY1_02170 PF08206 Ribonuclease B OB domain YEY1_02170 PF08461 Ribonuclease R winged-helix domain YEY1_02170 PF17876 Cold shock domain YEY1_02170 PF00575 S1 RNA binding domain YEY1_02180 PF00588 SpoU rRNA Methylase family YEY1_02180 PF08032 RNA 2'-O ribose methyltransferase substrate binding YEY1_02190 PF18158 Adaptive response protein AidB N-terminal domain YEY1_02190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YEY1_02190 PF02770 Acyl-CoA dehydrogenase, middle domain YEY1_02200 PF07338 Protein of unknown function (DUF1471) YEY1_02205 PF00326 Prolyl oligopeptidase family YEY1_02220 PF01250 Ribosomal protein S6 YEY1_02225 PF00436 Single-strand binding protein family YEY1_02230 PF01084 Ribosomal protein S18 YEY1_02235 PF01281 Ribosomal protein L9, N-terminal domain YEY1_02235 PF03948 Ribosomal protein L9, C-terminal domain YEY1_02245 PF04225 Opacity-associated protein A LysM-like domain YEY1_02245 PF08525 Opacity-associated protein A N-terminal motif YEY1_02250 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YEY1_02250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YEY1_02255 PF01814 Hemerythrin HHE cation binding domain YEY1_02255 PF04405 Domain of Unknown function (DUF542) YEY1_02260 PF02872 5'-nucleotidase, C-terminal domain YEY1_02260 PF00149 Calcineurin-like phosphoesterase YEY1_02265 PF00459 Inositol monophosphatase family YEY1_02270 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) YEY1_02275 PF06526 Protein of unknown function (DUF1107) YEY1_02280 PF01595 Cyclin M transmembrane N-terminal domain YEY1_02280 PF03471 Transporter associated domain YEY1_02280 PF00571 CBS domain YEY1_02285 PF01625 Peptide methionine sulfoxide reductase YEY1_02290 PF17243 POTRA domain TamA domain 1 YEY1_02290 PF07244 Surface antigen variable number repeat YEY1_02290 PF01103 Surface antigen YEY1_02295 PF04357 TamB, inner membrane protein subunit of TAM complex YEY1_02300 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like YEY1_02305 PF00719 Inorganic pyrophosphatase YEY1_02310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YEY1_02310 PF02203 Tar ligand binding domain homologue YEY1_02310 PF00672 HAMP domain YEY1_02315 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain YEY1_02320 PF08245 Mur ligase middle domain YEY1_02320 PF02875 Mur ligase family, glutamate ligase domain YEY1_02320 PF01225 Mur ligase family, catalytic domain YEY1_02330 PF02863 Arginine repressor, C-terminal domain YEY1_02330 PF01316 Arginine repressor, DNA binding domain YEY1_02335 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain YEY1_02335 PF00056 lactate/malate dehydrogenase, NAD binding domain YEY1_02340 PF13693 Winged helix-turn-helix DNA-binding YEY1_02350 PF00348 Polyprenyl synthetase YEY1_02355 PF00829 Ribosomal prokaryotic L21 protein YEY1_02360 PF01016 Ribosomal L27 protein YEY1_02365 PF00892 EamA-like transporter family YEY1_02370 PF01018 GTP1/OBG YEY1_02370 PF01926 50S ribosome-binding GTPase YEY1_02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_02375 PF00512 His Kinase A (phospho-acceptor) domain YEY1_02375 PF00672 HAMP domain YEY1_02380 PF00072 Response regulator receiver domain YEY1_02380 PF00486 Transcriptional regulatory protein, C terminal YEY1_02385 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family YEY1_02390 PF01272 Transcription elongation factor, GreA/GreB, C-term YEY1_02390 PF03449 Transcription elongation factor, N-terminal YEY1_02395 PF01985 CRS1 / YhbY (CRM) domain YEY1_02400 PF01728 FtsJ-like methyltransferase YEY1_02405 PF01434 Peptidase family M41 YEY1_02405 PF00004 ATPase family associated with various cellular activities (AAA) YEY1_02405 PF06480 FtsH Extracellular YEY1_02405 PF17862 AAA+ lid domain YEY1_02410 PF00809 Pterin binding enzyme YEY1_02415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YEY1_02415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YEY1_02415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YEY1_02415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YEY1_02420 PF03840 Preprotein translocase SecG subunit YEY1_02435 PF17384 RimP C-terminal SH3 domain YEY1_02435 PF02576 RimP N-terminal domain YEY1_02440 PF00575 S1 RNA binding domain YEY1_02440 PF13184 NusA-like KH domain YEY1_02440 PF08529 NusA N-terminal domain YEY1_02445 PF00009 Elongation factor Tu GTP binding domain YEY1_02445 PF08364 Bacterial translation initiation factor IF-2 associated region YEY1_02445 PF04760 Translation initiation factor IF-2, N-terminal region YEY1_02445 PF03144 Elongation factor Tu domain 2 YEY1_02445 PF11987 Translation-initiation factor 2 YEY1_02450 PF02033 Ribosome-binding factor A YEY1_02455 PF16198 tRNA pseudouridylate synthase B C-terminal domain YEY1_02455 PF09157 Pseudouridine synthase II TruB, C-terminal YEY1_02455 PF01509 TruB family pseudouridylate synthase (N terminal domain) YEY1_02460 PF00312 Ribosomal protein S15 YEY1_02465 PF01138 3' exoribonuclease family, domain 1 YEY1_02465 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain YEY1_02465 PF00013 KH domain YEY1_02465 PF03725 3' exoribonuclease family, domain 2 YEY1_02465 PF00575 S1 RNA binding domain YEY1_02470 PF07719 Tetratricopeptide repeat YEY1_02470 PF13181 Tetratricopeptide repeat YEY1_02480 PF12343 Cold shock protein DEAD box A YEY1_02480 PF03880 DbpA RNA binding domain YEY1_02480 PF00270 DEAD/DEAH box helicase YEY1_02480 PF00271 Helicase conserved C-terminal domain YEY1_02490 PF00296 Luciferase-like monooxygenase YEY1_02500 PF02321 Outer membrane efflux protein YEY1_02500 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YEY1_02510 PF03313 Serine dehydratase alpha chain YEY1_02530 PF13508 Acetyltransferase (GNAT) domain YEY1_02535 PF01541 GIY-YIG catalytic domain YEY1_02540 PF13520 Amino acid permease YEY1_02545 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YEY1_02545 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YEY1_02545 PF01276 Orn/Lys/Arg decarboxylase, major domain YEY1_02555 PF07940 Heparinase II/III-like protein YEY1_02555 PF05426 Alginate lyase YEY1_02565 PF13416 Bacterial extracellular solute-binding protein YEY1_02575 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_02580 PF00005 ABC transporter YEY1_02580 PF17912 MalK OB fold domain YEY1_02580 PF03459 TOBE domain YEY1_02600 PF05016 ParE toxin of type II toxin-antitoxin system, parDE YEY1_02605 PF13460 NAD(P)H-binding YEY1_02610 PF12706 Beta-lactamase superfamily domain YEY1_02620 PF07969 Amidohydrolase family YEY1_02625 PF00005 ABC transporter YEY1_02630 PF00005 ABC transporter YEY1_02635 PF06007 Phosphonate metabolism protein PhnJ YEY1_02645 PF05845 Bacterial phosphonate metabolism protein (PhnH) YEY1_02650 PF06754 Phosphonate metabolism protein PhnG YEY1_02655 PF00392 Bacterial regulatory proteins, gntR family YEY1_02655 PF07702 UTRA domain YEY1_02685 PF03477 ATP cone domain YEY1_02685 PF13597 Anaerobic ribonucleoside-triphosphate reductase YEY1_02695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YEY1_02695 PF00005 ABC transporter YEY1_02700 PF00005 ABC transporter YEY1_02700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YEY1_02710 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_02725 PF04074 YhcH/YjgK/YiaL YEY1_02735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YEY1_02735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YEY1_02740 PF06877 Regulator of ribonuclease activity B YEY1_02750 PF00583 Acetyltransferase (GNAT) family YEY1_02755 PF08264 Anticodon-binding domain of tRNA YEY1_02755 PF00133 tRNA synthetases class I (I, L, M and V) YEY1_02755 PF10458 Valyl tRNA synthetase tRNA binding arm YEY1_02760 PF04364 DNA polymerase III chi subunit, HolC YEY1_02765 PF00883 Cytosol aminopeptidase family, catalytic domain YEY1_02765 PF02789 Cytosol aminopeptidase family, N-terminal domain YEY1_02770 PF03739 Lipopolysaccharide export system permease LptF/LptG YEY1_02775 PF03739 Lipopolysaccharide export system permease LptF/LptG YEY1_02815 PF01695 IstB-like ATP binding protein YEY1_02820 PF00665 Integrase core domain YEY1_02825 PF13091 PLD-like domain YEY1_02825 PF13087 AAA domain YEY1_02830 PF00583 Acetyltransferase (GNAT) family YEY1_02870 PF10696 Protein of unknown function (DUF2501) YEY1_02880 PF03992 Antibiotic biosynthesis monooxygenase YEY1_02885 PF01791 DeoC/LacD family aldolase YEY1_02890 PF13407 Periplasmic binding protein domain YEY1_02895 PF02653 Branched-chain amino acid transport system / permease component YEY1_02900 PF02653 Branched-chain amino acid transport system / permease component YEY1_02905 PF00005 ABC transporter YEY1_02915 PF04198 Putative sugar-binding domain YEY1_02915 PF00325 Bacterial regulatory proteins, crp family YEY1_02920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YEY1_02920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YEY1_02925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YEY1_02935 PF13520 Amino acid permease YEY1_02950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YEY1_02955 PF00873 AcrB/AcrD/AcrF family YEY1_02960 PF00465 Iron-containing alcohol dehydrogenase YEY1_02965 PF02733 Dak1 domain YEY1_02970 PF02734 DAK2 domain YEY1_02975 PF05524 PEP-utilising enzyme, N-terminal YEY1_02975 PF03610 PTS system fructose IIA component YEY1_02975 PF00381 PTS HPr component phosphorylation site YEY1_02975 PF00391 PEP-utilising enzyme, mobile domain YEY1_02985 PF02543 Carbamoyltransferase N-terminus YEY1_02985 PF16861 Carbamoyltransferase C-terminus YEY1_03010 PF01095 Pectinesterase YEY1_03015 PF02954 Bacterial regulatory protein, Fis family YEY1_03015 PF00989 PAS fold YEY1_03015 PF00158 Sigma-54 interaction domain YEY1_03020 PF13407 Periplasmic binding protein domain YEY1_03020 PF00356 Bacterial regulatory proteins, lacI family YEY1_03025 PF00251 Glycosyl hydrolases family 32 N-terminal domain YEY1_03025 PF08244 Glycosyl hydrolases family 32 C terminal YEY1_03030 PF02378 Phosphotransferase system, EIIC YEY1_03030 PF00367 phosphotransferase system, EIIB YEY1_03035 PF11471 Maltoporin periplasmic N-terminal extension YEY1_03035 PF02264 LamB porin YEY1_03040 PF00294 pfkB family carbohydrate kinase YEY1_03050 PF00593 TonB dependent receptor YEY1_03050 PF07660 Secretin and TonB N terminus short domain YEY1_03050 PF07715 TonB-dependent Receptor Plug Domain YEY1_03060 PF00990 Diguanylate cyclase, GGDEF domain YEY1_03065 PF07256 Protein of unknown function (DUF1435) YEY1_03075 PF03466 LysR substrate binding domain YEY1_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_03080 PF00248 Aldo/keto reductase family YEY1_03085 PF05175 Methyltransferase small domain YEY1_03085 PF08468 Methyltransferase small domain N-terminal YEY1_03090 PF03603 DNA polymerase III psi subunit YEY1_03095 PF00583 Acetyltransferase (GNAT) family YEY1_03100 PF00009 Elongation factor Tu GTP binding domain YEY1_03100 PF03144 Elongation factor Tu domain 2 YEY1_03100 PF16658 Class II release factor RF3, C-terminal domain YEY1_03105 PF04972 BON domain YEY1_03110 PF07043 Protein of unknown function (DUF1328) YEY1_03115 PF01734 Patatin-like phospholipase YEY1_03120 PF01026 TatD related DNase YEY1_03125 PF01773 Na+ dependent nucleoside transporter N-terminus YEY1_03125 PF07662 Na+ dependent nucleoside transporter C-terminus YEY1_03125 PF07670 Nucleoside recognition YEY1_03130 PF01791 DeoC/LacD family aldolase YEY1_03135 PF02885 Glycosyl transferase family, helical bundle domain YEY1_03135 PF00591 Glycosyl transferase family, a/b domain YEY1_03135 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain YEY1_03140 PF01676 Metalloenzyme superfamily YEY1_03145 PF01048 Phosphorylase superfamily YEY1_03150 PF10144 Bacterial virulence factor haemolysin YEY1_03155 PF18429 Domain of unknown function (DUF5609) YEY1_03160 PF18073 Rubredoxin metal binding domain YEY1_03175 PF01381 Helix-turn-helix YEY1_03175 PF13521 AAA domain YEY1_03180 PF08240 Alcohol dehydrogenase GroES-like domain YEY1_03180 PF00107 Zinc-binding dehydrogenase YEY1_03185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_03185 PF03466 LysR substrate binding domain YEY1_03195 PF12848 ABC transporter YEY1_03195 PF00005 ABC transporter YEY1_03200 PF00691 OmpA family YEY1_03205 PF00990 Diguanylate cyclase, GGDEF domain YEY1_03205 PF17152 Periplasmic sensor domain YEY1_03215 PF00690 Cation transporter/ATPase, N-terminus YEY1_03215 PF00689 Cation transporting ATPase, C-terminus YEY1_03220 PF14718 Soluble lytic murein transglycosylase L domain YEY1_03220 PF01464 Transglycosylase SLT domain YEY1_03225 PF01371 Trp repressor protein YEY1_03230 PF01931 Protein of unknown function DUF84 YEY1_03235 PF00300 Histidine phosphatase superfamily (branch 1) YEY1_03240 PF12833 Helix-turn-helix domain YEY1_03240 PF06445 GyrI-like small molecule binding domain YEY1_03245 PF05981 CreA protein YEY1_03250 PF00486 Transcriptional regulatory protein, C terminal YEY1_03250 PF00072 Response regulator receiver domain YEY1_03255 PF08254 Threonine leader peptide YEY1_03260 PF13840 ACT domain YEY1_03260 PF03447 Homoserine dehydrogenase, NAD binding domain YEY1_03260 PF00696 Amino acid kinase family YEY1_03260 PF01842 ACT domain YEY1_03260 PF00742 Homoserine dehydrogenase YEY1_03265 PF00288 GHMP kinases N terminal domain YEY1_03265 PF08544 GHMP kinases C terminal YEY1_03270 PF14821 Threonine synthase N terminus YEY1_03270 PF00291 Pyridoxal-phosphate dependent enzyme YEY1_03285 PF03883 Peroxide stress protein YaaA YEY1_03290 PF00923 Transaldolase/Fructose-6-phosphate aldolase YEY1_03295 PF00994 Probable molybdopterin binding domain YEY1_03300 PF07690 Major Facilitator Superfamily YEY1_03305 PF00030 Beta/Gamma crystallin YEY1_03310 PF01184 GPR1/FUN34/yaaH family YEY1_03315 PF00012 Hsp70 protein YEY1_03320 PF01556 DnaJ C terminal domain YEY1_03320 PF00684 DnaJ central domain YEY1_03320 PF00226 DnaJ domain YEY1_03330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_03330 PF03466 LysR substrate binding domain YEY1_03335 PF01649 Ribosomal protein S20 YEY1_03350 PF01687 Riboflavin kinase YEY1_03350 PF06574 FAD synthetase YEY1_03355 PF08264 Anticodon-binding domain of tRNA YEY1_03355 PF00133 tRNA synthetases class I (I, L, M and V) YEY1_03355 PF06827 Zinc finger found in FPG and IleRS YEY1_03360 PF01252 Signal peptidase (SPase) II YEY1_03365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YEY1_03370 PF02401 LytB protein YEY1_03375 PF01113 Dihydrodipicolinate reductase, N-terminus YEY1_03375 PF05173 Dihydrodipicolinate reductase, C-terminus YEY1_03380 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain YEY1_03380 PF00117 Glutamine amidotransferase class-I YEY1_03385 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YEY1_03385 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain YEY1_03385 PF02142 MGS-like domain YEY1_03390 PF01810 LysE type translocator YEY1_03395 PF06738 Putative threonine/serine exporter YEY1_03400 PF12821 Threonine/Serine exporter, ThrE YEY1_03405 PF00186 Dihydrofolate reductase YEY1_03410 PF00149 Calcineurin-like phosphoesterase YEY1_03415 PF04379 ApaG domain YEY1_03420 PF00398 Ribosomal RNA adenine dimethylase YEY1_03425 PF04166 Pyridoxal phosphate biosynthetic protein PdxA YEY1_03430 PF00639 PPIC-type PPIASE domain YEY1_03430 PF09312 SurA N-terminal domain YEY1_03435 PF04453 LPS transport system D YEY1_03435 PF03968 OstA-like protein YEY1_03440 PF00226 DnaJ domain YEY1_03440 PF05099 Tellurite resistance protein TerB YEY1_03445 PF00849 RNA pseudouridylate synthase YEY1_03450 PF09134 Invasin, domain 3 YEY1_03450 PF11924 Inverse autotransporter, beta-domain YEY1_03450 PF02369 Bacterial Ig-like domain (group 1) YEY1_03455 PF00271 Helicase conserved C-terminal domain YEY1_03455 PF00176 SNF2 family N-terminal domain YEY1_03455 PF18339 RapA N-terminal Tudor like domain 1 YEY1_03455 PF18337 RapA N-terminal Tudor like domain YEY1_03455 PF12137 RNA polymerase recycling family C-terminal YEY1_03460 PF00136 DNA polymerase family B YEY1_03460 PF03104 DNA polymerase family B, exonuclease domain YEY1_03465 PF09335 SNARE associated Golgi protein YEY1_03470 PF00005 ABC transporter YEY1_03475 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_03495 PF12793 Sugar transport-related sRNA regulator N-term YEY1_03495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YEY1_03500 PF04055 Radical SAM superfamily YEY1_03510 PF07690 Major Facilitator Superfamily YEY1_03515 PF03222 Tryptophan/tyrosine permease family YEY1_03530 PF00694 Aconitase C-terminal domain YEY1_03535 PF00330 Aconitase family (aconitate hydratase) YEY1_03540 PF00180 Isocitrate/isopropylmalate dehydrogenase YEY1_03545 PF08502 LeuA allosteric (dimerisation) domain YEY1_03545 PF00682 HMGL-like YEY1_03555 PF03466 LysR substrate binding domain YEY1_03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_03560 PF00501 AMP-binding enzyme YEY1_03565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YEY1_03565 PF00205 Thiamine pyrophosphate enzyme, central domain YEY1_03565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YEY1_03570 PF10369 Small subunit of acetolactate synthase YEY1_03575 PF00356 Bacterial regulatory proteins, lacI family YEY1_03575 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YEY1_03580 PF06610 L-alanine exporter YEY1_03585 PF02381 MraZ protein, putative antitoxin-like YEY1_03590 PF01795 MraW methylase family YEY1_03595 PF04999 Cell division protein FtsL YEY1_03600 PF03717 Penicillin-binding Protein dimerisation domain YEY1_03600 PF00905 Penicillin binding protein transpeptidase domain YEY1_03605 PF08245 Mur ligase middle domain YEY1_03605 PF02875 Mur ligase family, glutamate ligase domain YEY1_03605 PF01225 Mur ligase family, catalytic domain YEY1_03610 PF01225 Mur ligase family, catalytic domain YEY1_03610 PF02875 Mur ligase family, glutamate ligase domain YEY1_03610 PF08245 Mur ligase middle domain YEY1_03615 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 YEY1_03615 PF00953 Glycosyl transferase family 4 YEY1_03620 PF08245 Mur ligase middle domain YEY1_03620 PF02875 Mur ligase family, glutamate ligase domain YEY1_03625 PF01098 Cell cycle protein YEY1_03630 PF03033 Glycosyltransferase family 28 N-terminal domain YEY1_03630 PF04101 Glycosyltransferase family 28 C-terminal domain YEY1_03635 PF01225 Mur ligase family, catalytic domain YEY1_03635 PF02875 Mur ligase family, glutamate ligase domain YEY1_03635 PF08245 Mur ligase middle domain YEY1_03640 PF01820 D-ala D-ala ligase N-terminus YEY1_03640 PF07478 D-ala D-ala ligase C-terminus YEY1_03645 PF08478 POTRA domain, FtsQ-type YEY1_03645 PF03799 Cell division protein FtsQ YEY1_03650 PF02491 SHS2 domain inserted in FTSA YEY1_03655 PF12327 FtsZ family, C-terminal domain YEY1_03655 PF00091 Tubulin/FtsZ family, GTPase domain YEY1_03660 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase YEY1_03670 PF06558 Secretion monitor precursor protein (SecM) YEY1_03675 PF01043 SecA preprotein cross-linking domain YEY1_03675 PF07517 SecA DEAD-like domain YEY1_03675 PF02810 SEC-C motif YEY1_03675 PF07516 SecA Wing and Scaffold domain YEY1_03680 PF00293 NUDIX domain YEY1_03685 PF03884 DNA gyrase inhibitor YacG YEY1_03690 PF07072 Cell division protein YEY1_03695 PF01121 Dephospho-CoA kinase YEY1_03705 PF00478 IMP dehydrogenase / GMP reductase domain YEY1_03710 PF00482 Type II secretion system (T2SS), protein F YEY1_03715 PF00437 Type II/IV secretion system protein YEY1_03715 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain YEY1_03720 PF07963 Prokaryotic N-terminal methylation motif YEY1_03725 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain YEY1_03725 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain YEY1_03730 PF01510 N-acetylmuramoyl-L-alanine amidase YEY1_03735 PF17113 Regulatory signalling modulator protein AmpE YEY1_03740 PF00324 Amino acid permease YEY1_03745 PF07729 FCD domain YEY1_03745 PF00392 Bacterial regulatory proteins, gntR family YEY1_03750 PF17831 Pyruvate dehydrogenase E1 component middle domain YEY1_03750 PF00456 Transketolase, thiamine diphosphate binding domain YEY1_03755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YEY1_03755 PF02817 e3 binding domain YEY1_03755 PF00364 Biotin-requiring enzyme YEY1_03760 PF07992 Pyridine nucleotide-disulphide oxidoreductase YEY1_03760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YEY1_03770 PF12833 Helix-turn-helix domain YEY1_03770 PF01965 DJ-1/PfpI family YEY1_03775 PF07715 TonB-dependent Receptor Plug Domain YEY1_03775 PF00593 TonB dependent receptor YEY1_03780 PF06434 Aconitate hydratase 2 N-terminus YEY1_03780 PF00330 Aconitase family (aconitate hydratase) YEY1_03780 PF11791 Aconitate B N-terminal domain YEY1_03785 PF06062 Uncharacterised protein family (UPF0231) YEY1_03790 PF00892 EamA-like transporter family YEY1_03795 PF18624 CDI immunity protein YEY1_03800 PF02675 S-adenosylmethionine decarboxylase YEY1_03805 PF17284 Spermidine synthase tetramerisation domain YEY1_03810 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) YEY1_03815 PF07731 Multicopper oxidase YEY1_03815 PF07732 Multicopper oxidase YEY1_03815 PF10518 TAT (twin-arginine translocation) pathway signal sequence YEY1_03815 PF00394 Multicopper oxidase YEY1_03820 PF00156 Phosphoribosyl transferase domain YEY1_03825 PF00484 Carbonic anhydrase YEY1_03830 PF00005 ABC transporter YEY1_03835 PF01061 ABC-2 type transporter YEY1_03840 PF01522 Polysaccharide deacetylase YEY1_03845 PF02261 Aspartate decarboxylase YEY1_03850 PF02569 Pantoate-beta-alanine ligase YEY1_03855 PF02548 Ketopantoate hydroxymethyltransferase YEY1_03860 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YEY1_03865 PF12627 Probable RNA and SrmB- binding site of polymerase A YEY1_03865 PF12626 Polymerase A arginine-rich C-terminus YEY1_03865 PF01743 Poly A polymerase head domain YEY1_03870 PF00749 tRNA synthetases class I (E and Q), catalytic domain YEY1_03875 PF01258 Prokaryotic dksA/traR C4-type zinc finger YEY1_03885 PF03749 Sugar fermentation stimulation protein RE domain YEY1_03885 PF17746 SfsA N-terminal OB domain YEY1_03890 PF02834 LigT like Phosphoesterase YEY1_03895 PF00270 DEAD/DEAH box helicase YEY1_03895 PF08482 ATP-dependent helicase C-terminal YEY1_03895 PF04408 Helicase associated domain (HA2) YEY1_03895 PF00271 Helicase conserved C-terminal domain YEY1_03905 PF00905 Penicillin binding protein transpeptidase domain YEY1_03905 PF14814 Bifunctional transglycosylase second domain YEY1_03905 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal YEY1_03905 PF00912 Transglycosylase YEY1_03910 PF00005 ABC transporter YEY1_03915 PF01497 Periplasmic binding protein YEY1_03920 PF01032 FecCD transport family YEY1_03925 PF07690 Major Facilitator Superfamily YEY1_03930 PF00202 Aminotransferase class-III YEY1_03935 PF00654 Voltage gated chloride channel YEY1_03940 PF01521 Iron-sulphur cluster biosynthesis YEY1_03945 PF03458 UPF0126 domain YEY1_03950 PF01497 Periplasmic binding protein YEY1_03955 PF01048 Phosphorylase superfamily YEY1_03960 PF13286 Phosphohydrolase-associated domain YEY1_03960 PF01966 HD domain YEY1_03965 PF00595 PDZ domain YEY1_03970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) YEY1_03970 PF01627 Hpt domain YEY1_03970 PF00512 His Kinase A (phospho-acceptor) domain YEY1_03970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_03970 PF00672 HAMP domain YEY1_03970 PF00072 Response regulator receiver domain YEY1_03975 PF05958 tRNA (Uracil-5-)-methyltransferase YEY1_03975 PF01938 TRAM domain YEY1_03980 PF02824 TGS domain YEY1_03980 PF04607 Region found in RelA / SpoT proteins YEY1_03980 PF13291 ACT domain YEY1_03985 PF03819 MazG nucleotide pyrophosphohydrolase domain YEY1_03990 PF06418 CTP synthase N-terminus YEY1_03990 PF00117 Glutamine amidotransferase class-I YEY1_03995 PF00113 Enolase, C-terminal TIM barrel domain YEY1_03995 PF03952 Enolase, N-terminal domain YEY1_04000 PF01812 5-formyltetrahydrofolate cyclo-ligase family YEY1_04010 PF05164 Cell division protein ZapA YEY1_04020 PF03695 Uncharacterised protein family (UPF0149) YEY1_04025 PF05195 Aminopeptidase P, N-terminal domain YEY1_04025 PF00557 Metallopeptidase family M24 YEY1_04030 PF01494 FAD binding domain YEY1_04035 PF01494 FAD binding domain YEY1_04040 PF08669 Glycine cleavage T-protein C-terminal barrel domain YEY1_04040 PF01571 Aminomethyltransferase folate-binding domain YEY1_04045 PF01597 Glycine cleavage H-protein YEY1_04050 PF02347 Glycine cleavage system P-protein YEY1_04070 PF03006 Haemolysin-III related YEY1_04080 PF01571 Aminomethyltransferase folate-binding domain YEY1_04085 PF03937 Flavinator of succinate dehydrogenase YEY1_04090 PF07254 Membrane-bound toxin component of toxin-antitoxin system YEY1_04095 PF00072 Response regulator receiver domain YEY1_04095 PF00486 Transcriptional regulatory protein, C terminal YEY1_04105 PF06123 Inner membrane protein CreD YEY1_04110 PF00258 Flavodoxin YEY1_04115 PF02899 Phage integrase, N-terminal SAM-like domain YEY1_04115 PF00589 Phage integrase family YEY1_04120 PF13098 Thioredoxin-like domain YEY1_04120 PF10411 Disulfide bond isomerase protein N-terminus YEY1_04125 PF17768 RecJ OB domain YEY1_04125 PF01368 DHH family YEY1_04125 PF02272 DHHA1 domain YEY1_04140 PF00152 tRNA synthetases class II (D, K and N) YEY1_04140 PF01336 OB-fold nucleic acid binding domain YEY1_04165 PF15723 Motility quorum-sensing regulator, toxin of MqsA YEY1_04170 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA YEY1_04175 PF00872 Transposase, Mutator family YEY1_04190 PF13474 SnoaL-like domain YEY1_04195 PF00990 Diguanylate cyclase, GGDEF domain YEY1_04195 PF08448 PAS fold YEY1_04210 PF00226 DnaJ domain YEY1_04210 PF01556 DnaJ C terminal domain YEY1_04225 PF01638 HxlR-like helix-turn-helix YEY1_04230 PF00484 Carbonic anhydrase YEY1_04245 PF00263 Bacterial type II and III secretion system protein YEY1_04245 PF03958 Bacterial type II/III secretion system short domain YEY1_04250 PF00263 Bacterial type II and III secretion system protein YEY1_04250 PF03958 Bacterial type II/III secretion system short domain YEY1_04265 PF08334 Type II secretion system (T2SS), protein G YEY1_04265 PF07963 Prokaryotic N-terminal methylation motif YEY1_04305 PF01478 Type IV leader peptidase family YEY1_04305 PF06750 Bacterial Peptidase A24 N-terminal domain YEY1_04340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_04340 PF03466 LysR substrate binding domain YEY1_04345 PF07690 Major Facilitator Superfamily YEY1_04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_04350 PF03466 LysR substrate binding domain YEY1_04355 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YEY1_04355 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain YEY1_04360 PF00356 Bacterial regulatory proteins, lacI family YEY1_04370 PF01568 Molydopterin dinucleotide binding domain YEY1_04370 PF00384 Molybdopterin oxidoreductase YEY1_04380 PF00501 AMP-binding enzyme YEY1_04380 PF01553 Acyltransferase YEY1_04380 PF13193 AMP-binding enzyme C-terminal domain YEY1_04385 PF07690 Major Facilitator Superfamily YEY1_04390 PF00248 Aldo/keto reductase family YEY1_04395 PF03741 Integral membrane protein TerC family YEY1_04400 PF02976 DNA mismatch repair enzyme MutH YEY1_04405 PF00293 NUDIX domain YEY1_04410 PF00391 PEP-utilising enzyme, mobile domain YEY1_04410 PF01590 GAF domain YEY1_04410 PF05524 PEP-utilising enzyme, N-terminal YEY1_04410 PF02896 PEP-utilising enzyme, TIM barrel domain YEY1_04415 PF01790 Prolipoprotein diacylglyceryl transferase YEY1_04420 PF00303 Thymidylate synthase YEY1_04440 PF07963 Prokaryotic N-terminal methylation motif YEY1_04440 PF12528 Type II secretion prepilin peptidase dependent protein C YEY1_04445 PF17946 RecC C-terminal domain YEY1_04450 PF16187 Middle or third domain of peptidase_M16 YEY1_04450 PF05193 Peptidase M16 inactive domain YEY1_04450 PF00675 Insulinase (Peptidase family M16) YEY1_04455 PF12705 PD-(D/E)XK nuclease superfamily YEY1_04455 PF00580 UvrD/REP helicase N-terminal domain YEY1_04455 PF13361 UvrD-like helicase C-terminal domain YEY1_04460 PF13538 UvrD-like helicase C-terminal domain YEY1_04470 PF18125 RlmM ferredoxin-like domain YEY1_04470 PF01728 FtsJ-like methyltransferase YEY1_04475 PF04241 Protein of unknown function (DUF423) YEY1_04480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_04480 PF03466 LysR substrate binding domain YEY1_04490 PF06004 Bacterial protein of unknown function (DUF903) YEY1_04495 PF00266 Aminotransferase class-V YEY1_04500 PF02657 Fe-S metabolism associated domain YEY1_04505 PF00899 ThiF family YEY1_04510 PF06725 3D domain YEY1_04510 PF03562 MltA specific insert domain YEY1_04530 PF11741 AMIN domain YEY1_04530 PF01520 N-acetylmuramoyl-L-alanine amidase YEY1_04535 PF00696 Amino acid kinase family YEY1_04535 PF00583 Acetyltransferase (GNAT) family YEY1_04550 PF00872 Transposase, Mutator family YEY1_04555 PF01367 5'-3' exonuclease, C-terminal SAM fold YEY1_04555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YEY1_04560 PF11892 Domain of unknown function (DUF3412) YEY1_04560 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases YEY1_04560 PF03641 Possible lysine decarboxylase YEY1_04565 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term YEY1_04565 PF14489 QueF-like protein YEY1_04570 PF07348 Syd protein (SUKH-2) YEY1_04575 PF04287 tRNA pseudouridine synthase C YEY1_04580 PF00849 RNA pseudouridylate synthase YEY1_04585 PF00258 Flavodoxin YEY1_04590 PF11944 Protein of unknown function (DUF3461) YEY1_04595 PF14602 Hexapeptide repeat of succinyl-transferase YEY1_04595 PF00132 Bacterial transferase hexapeptide (six repeats) YEY1_04595 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal YEY1_04600 PF01909 Nucleotidyltransferase domain YEY1_04600 PF08335 GlnD PII-uridylyltransferase YEY1_04600 PF01966 HD domain YEY1_04600 PF01842 ACT domain YEY1_04605 PF00557 Metallopeptidase family M24 YEY1_04615 PF00318 Ribosomal protein S2 YEY1_04620 PF00889 Elongation factor TS YEY1_04625 PF00696 Amino acid kinase family YEY1_04630 PF01765 Ribosome recycling factor YEY1_04635 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain YEY1_04635 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase YEY1_04635 PF13288 DXP reductoisomerase C-terminal domain YEY1_04640 PF01255 Putative undecaprenyl diphosphate synthase YEY1_04650 PF17820 PDZ domain YEY1_04650 PF02163 Peptidase family M50 YEY1_04655 PF07244 Surface antigen variable number repeat YEY1_04655 PF01103 Surface antigen YEY1_04660 PF03938 Outer membrane protein (OmpH-like) YEY1_04665 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD YEY1_04665 PF00132 Bacterial transferase hexapeptide (six repeats) YEY1_04670 PF07977 FabA-like domain YEY1_04675 PF00132 Bacterial transferase hexapeptide (six repeats) YEY1_04675 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 YEY1_04680 PF02684 Lipid-A-disaccharide synthetase YEY1_04685 PF01351 Ribonuclease HII YEY1_04690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain YEY1_04690 PF07733 Bacterial DNA polymerase III alpha NTPase domain YEY1_04690 PF01336 OB-fold nucleic acid binding domain YEY1_04690 PF02811 PHP domain YEY1_04690 PF14579 Helix-hairpin-helix motif YEY1_04695 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit YEY1_04705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YEY1_04710 PF01171 PP-loop family YEY1_04710 PF09179 TilS substrate binding domain YEY1_04710 PF11734 TilS substrate C-terminal domain YEY1_04715 PF00034 Cytochrome c YEY1_04720 PF07073 Modulator of Rho-dependent transcription termination (ROF) YEY1_04725 PF06786 Uncharacterised protein family (UPF0253) YEY1_04730 PF07152 YaeQ protein YEY1_04735 PF00472 RF-1 domain YEY1_04740 PF04170 NlpE N-terminal domain YEY1_04740 PF17185 NlpE C-terminal OB domain YEY1_04745 PF04073 Aminoacyl-tRNA editing domain YEY1_04745 PF03129 Anticodon binding domain YEY1_04745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YEY1_04750 PF01980 tRNA-methyltransferase O YEY1_04750 PF18389 TrmO C-terminal domain YEY1_04755 PF16358 RcsF lipoprotein YEY1_04760 PF03180 NLPA lipoprotein YEY1_04765 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_04770 PF00005 ABC transporter YEY1_04770 PF09383 NIL domain YEY1_04810 PF00872 Transposase, Mutator family YEY1_04820 PF00248 Aldo/keto reductase family YEY1_04825 PF03466 LysR substrate binding domain YEY1_04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_04830 PF07690 Major Facilitator Superfamily YEY1_04835 PF03372 Endonuclease/Exonuclease/phosphatase family YEY1_04845 PF01464 Transglycosylase SLT domain YEY1_04845 PF01476 LysM domain YEY1_04850 PF16123 Hydroxyacylglutathione hydrolase C-terminus YEY1_04850 PF00753 Metallo-beta-lactamase superfamily YEY1_04855 PF08241 Methyltransferase domain YEY1_04860 PF00075 RNase H YEY1_04865 PF00929 Exonuclease YEY1_04875 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YEY1_04885 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_04890 PF00571 CBS domain YEY1_04890 PF00005 ABC transporter YEY1_04895 PF00268 Ribonucleotide reductase, small chain YEY1_04900 PF08343 Ribonucleotide reductase N-terminal YEY1_04900 PF00317 Ribonucleotide reductase, all-alpha domain YEY1_04900 PF02867 Ribonucleotide reductase, barrel domain YEY1_04905 PF07972 NrdI Flavodoxin like YEY1_04915 PF02627 Carboxymuconolactone decarboxylase family YEY1_04920 PF00392 Bacterial regulatory proteins, gntR family YEY1_04920 PF00155 Aminotransferase class I and II YEY1_04925 PF05957 Bacterial protein of unknown function (DUF883) YEY1_04930 PF06392 Acid shock protein repeat YEY1_04940 PF12833 Helix-turn-helix domain YEY1_04945 PF07690 Major Facilitator Superfamily YEY1_04950 PF09400 Protein of unknown function (DUF2002) YEY1_04965 PF00313 'Cold-shock' DNA-binding domain YEY1_04990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YEY1_04995 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_05000 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_05000 PF12911 N-terminal TM domain of oligopeptide transport permease C YEY1_05005 PF00005 ABC transporter YEY1_05010 PF00005 ABC transporter YEY1_05020 PF00547 Urease, gamma subunit YEY1_05025 PF00699 Urease beta subunit YEY1_05030 PF00449 Urease alpha-subunit, N-terminal domain YEY1_05030 PF01979 Amidohydrolase family YEY1_05035 PF05194 UreE urease accessory protein, C-terminal domain YEY1_05035 PF02814 UreE urease accessory protein, N-terminal domain YEY1_05040 PF01730 UreF YEY1_05045 PF02492 CobW/HypB/UreG, nucleotide-binding domain YEY1_05050 PF01774 UreD urease accessory protein YEY1_05055 PF03253 Urea transporter YEY1_05060 PF03824 High-affinity nickel-transport protein YEY1_05065 PF06411 HdeA/HdeB family YEY1_05070 PF02254 TrkA-N domain YEY1_05070 PF07885 Ion channel YEY1_05075 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YEY1_05080 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YEY1_05085 PF00248 Aldo/keto reductase family YEY1_05090 PF01548 Transposase YEY1_05090 PF02371 Transposase IS116/IS110/IS902 family YEY1_05095 PF07995 Glucose / Sorbosone dehydrogenase YEY1_05100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YEY1_05105 PF02378 Phosphotransferase system, EIIC YEY1_05110 PF00232 Glycosyl hydrolase family 1 YEY1_05115 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit YEY1_05120 PF07883 Cupin domain YEY1_05120 PF12833 Helix-turn-helix domain YEY1_05125 PF04794 YdjC-like protein YEY1_05130 PF00916 Sulfate permease family YEY1_05130 PF01740 STAS domain YEY1_05140 PF00872 Transposase, Mutator family YEY1_05145 PF00589 Phage integrase family YEY1_05145 PF13356 Arm DNA-binding domain YEY1_05155 PF01668 SmpB protein YEY1_05160 PF03364 Polyketide cyclase / dehydrase and lipid transport YEY1_05165 PF03658 RnfH family Ubiquitin YEY1_05170 PF04355 SmpA / OmlA family YEY1_05175 PF02463 RecF/RecN/SMC N terminal domain YEY1_05180 PF01513 ATP-NAD kinase YEY1_05185 PF01025 GrpE YEY1_05190 PF03167 Uracil DNA glycosylase superfamily YEY1_05195 PF01228 Glycine radical YEY1_05205 PF12796 Ankyrin repeats (3 copies) YEY1_05225 PF00270 DEAD/DEAH box helicase YEY1_05225 PF00271 Helicase conserved C-terminal domain YEY1_05230 PF05175 Methyltransferase small domain YEY1_05235 PF02910 Fumarate reductase flavoprotein C-term YEY1_05235 PF00890 FAD binding domain YEY1_05240 PF04542 Sigma-70 region 2 YEY1_05240 PF08281 Sigma-70, region 4 YEY1_05245 PF03873 Anti sigma-E protein RseA, C-terminal domain YEY1_05245 PF03872 Anti sigma-E protein RseA, N-terminal domain YEY1_05250 PF03888 MucB/RseB N-terminal domain YEY1_05250 PF17188 MucB/RseB C-terminal domain YEY1_05265 PF06421 GTP-binding protein LepA C-terminus YEY1_05265 PF03144 Elongation factor Tu domain 2 YEY1_05265 PF00679 Elongation factor G C-terminus YEY1_05265 PF00009 Elongation factor Tu GTP binding domain YEY1_05270 PF10502 Signal peptidase, peptidase S26 YEY1_05275 PF14622 Ribonuclease-III-like YEY1_05275 PF00035 Double-stranded RNA binding motif YEY1_05280 PF01926 50S ribosome-binding GTPase YEY1_05280 PF07650 KH domain YEY1_05285 PF02565 Recombination protein O C terminal YEY1_05285 PF11967 Recombination protein O N terminal YEY1_05290 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ YEY1_05295 PF01648 4'-phosphopantetheinyl transferase superfamily YEY1_05305 PF02447 GntP family permease YEY1_05310 PF12838 4Fe-4S dicluster domain YEY1_05315 PF01418 Helix-turn-helix domain, rpiR family YEY1_05315 PF01380 SIS domain YEY1_05320 PF01380 SIS domain YEY1_05335 PF14437 MafB19-like deaminase YEY1_05340 PF00497 Bacterial extracellular solute-binding proteins, family 3 YEY1_05340 PF01464 Transglycosylase SLT domain YEY1_05345 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal YEY1_05345 PF02769 AIR synthase related protein, C-terminal domain YEY1_05345 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain YEY1_05355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_05355 PF00512 His Kinase A (phospho-acceptor) domain YEY1_05360 PF13942 YfhG lipoprotein YEY1_05365 PF00072 Response regulator receiver domain YEY1_05365 PF00158 Sigma-54 interaction domain YEY1_05370 PF02540 NAD synthase YEY1_05370 PF00795 Carbon-nitrogen hydrolase YEY1_05375 PF00543 Nitrogen regulatory protein P-II YEY1_05380 PF10797 Protein of unknown function YEY1_05385 PF10941 Protein of unknown function DUF2620 YEY1_05390 PF02126 Phosphotriesterase family YEY1_05395 PF01168 Alanine racemase, N-terminal domain YEY1_05405 PF14503 YhfZ C-terminal domain YEY1_05405 PF14502 Helix-turn-helix domain YEY1_05410 PF00042 Globin YEY1_05410 PF00970 Oxidoreductase FAD-binding domain YEY1_05410 PF00175 Oxidoreductase NAD-binding domain YEY1_05415 PF00464 Serine hydroxymethyltransferase YEY1_05420 PF12832 MFS_1 like family YEY1_05425 PF00874 PRD domain YEY1_05430 PF06226 Protein of unknown function (DUF1007) YEY1_05435 PF03824 High-affinity nickel-transport protein YEY1_05440 PF00459 Inositol monophosphatase family YEY1_05445 PF00588 SpoU rRNA Methylase family YEY1_05450 PF02082 Transcriptional regulator YEY1_05455 PF00266 Aminotransferase class-V YEY1_05460 PF01592 NifU-like N terminal domain YEY1_05465 PF01521 Iron-sulphur cluster biosynthesis YEY1_05470 PF07743 HSCB C-terminal oligomerisation domain YEY1_05470 PF00226 DnaJ domain YEY1_05475 PF00012 Hsp70 protein YEY1_05480 PF00111 2Fe-2S iron-sulfur cluster binding domain YEY1_05485 PF04384 Iron-sulphur cluster assembly YEY1_05490 PF00883 Cytosol aminopeptidase family, catalytic domain YEY1_05490 PF12404 Peptidase YEY1_05495 PF14581 SseB protein C-terminal domain YEY1_05495 PF07179 SseB protein N-terminal domain YEY1_05510 PF01835 MG2 domain YEY1_05510 PF07703 Alpha-2-macroglobulin bait region domain YEY1_05510 PF17962 Bacterial macroglobulin domain 6 YEY1_05510 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain YEY1_05510 PF00207 Alpha-2-macroglobulin family YEY1_05510 PF07678 A-macroglobulin TED domain YEY1_05510 PF11974 Bacterial alpha-2-macroglobulin MG3 domain YEY1_05510 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain YEY1_05510 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain YEY1_05515 PF06832 Penicillin-Binding Protein C-terminus Family YEY1_05515 PF00905 Penicillin binding protein transpeptidase domain YEY1_05515 PF00912 Transglycosylase YEY1_05525 PF00334 Nucleoside diphosphate kinase YEY1_05530 PF04055 Radical SAM superfamily YEY1_05540 PF13464 Domain of unknown function (DUF4115) YEY1_05545 PF04551 GcpE protein YEY1_05550 PF13393 Histidyl-tRNA synthetase YEY1_05550 PF03129 Anticodon binding domain YEY1_05555 PF09976 Tetratricopeptide repeat-like domain YEY1_05560 PF13360 PQQ-like domain YEY1_05570 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal YEY1_05570 PF01926 50S ribosome-binding GTPase YEY1_05585 PF07191 zinc-ribbons YEY1_05590 PF02601 Exonuclease VII, large subunit YEY1_05590 PF13742 OB-fold nucleic acid binding domain YEY1_05600 PF00571 CBS domain YEY1_05600 PF00478 IMP dehydrogenase / GMP reductase domain YEY1_05605 PF02540 NAD synthase YEY1_05605 PF00117 Glutamine amidotransferase class-I YEY1_05605 PF00958 GMP synthase C terminal domain YEY1_05625 PF00034 Cytochrome c YEY1_05625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III YEY1_05645 PF08543 Phosphomethylpyrimidine kinase YEY1_05660 PF01380 SIS domain YEY1_05660 PF00571 CBS domain YEY1_05665 PF08220 DeoR-like helix-turn-helix domain YEY1_05665 PF00455 DeoR C terminal sensor domain YEY1_05670 PF06923 Glucitol operon activator protein (GutM) YEY1_05675 PF00106 short chain dehydrogenase YEY1_05680 PF03829 PTS system glucitol/sorbitol-specific IIA component YEY1_05685 PF07663 Sorbitol phosphotransferase enzyme II C-terminus YEY1_05685 PF03612 Sorbitol phosphotransferase enzyme II N-terminus YEY1_05690 PF03608 PTS system enzyme II sorbitol-specific factor YEY1_05695 PF00781 Diacylglycerol kinase catalytic domain YEY1_05705 PF07411 Domain of unknown function (DUF1508) YEY1_05710 PF00486 Transcriptional regulatory protein, C terminal YEY1_05710 PF00072 Response regulator receiver domain YEY1_05715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_05715 PF00672 HAMP domain YEY1_05715 PF00512 His Kinase A (phospho-acceptor) domain YEY1_05720 PF07690 Major Facilitator Superfamily YEY1_05725 PF00873 AcrB/AcrD/AcrF family YEY1_05730 PF00873 AcrB/AcrD/AcrF family YEY1_05735 PF13533 Biotin-lipoyl like YEY1_05750 PF00012 Hsp70 protein YEY1_05755 PF13426 PAS domain YEY1_05755 PF00990 Diguanylate cyclase, GGDEF domain YEY1_05755 PF08448 PAS fold YEY1_05755 PF00563 EAL domain YEY1_05755 PF05231 MASE1 YEY1_05755 PF08447 PAS fold YEY1_05760 PF00005 ABC transporter YEY1_05765 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_05770 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_05775 PF17941 Polyphosphate kinase C-terminal domain 1 YEY1_05775 PF02503 Polyphosphate kinase middle domain YEY1_05775 PF13089 Polyphosphate kinase N-terminal domain YEY1_05775 PF13090 Polyphosphate kinase C-terminal domain 2 YEY1_05780 PF02541 Ppx/GppA phosphatase family YEY1_05790 PF01769 Divalent cation transporter YEY1_05790 PF03448 MgtE intracellular N domain YEY1_05790 PF00571 CBS domain YEY1_05795 PF08447 PAS fold YEY1_05795 PF00990 Diguanylate cyclase, GGDEF domain YEY1_05795 PF13426 PAS domain YEY1_05795 PF08448 PAS fold YEY1_05795 PF00563 EAL domain YEY1_05795 PF05231 MASE1 YEY1_05805 PF13302 Acetyltransferase (GNAT) domain YEY1_05810 PF00551 Formyl transferase YEY1_05815 PF02769 AIR synthase related protein, C-terminal domain YEY1_05815 PF00586 AIR synthase related protein, N-terminal domain YEY1_05825 PF00860 Permease family YEY1_05830 PF00308 Bacterial dnaA protein YEY1_05835 PF03960 ArsC family YEY1_05840 PF07720 Tetratricopeptide repeat YEY1_05840 PF01435 Peptidase family M48 YEY1_05845 PF01594 AI-2E family transporter YEY1_05855 PF00578 AhpC/TSA family YEY1_05860 PF01842 ACT domain YEY1_05865 PF00701 Dihydrodipicolinate synthetase family YEY1_05870 PF06804 NlpB/DapX lipoprotein YEY1_05880 PF01259 SAICAR synthetase YEY1_05885 PF04228 Putative neutral zinc metallopeptidase YEY1_05890 PF04284 Protein of unknown function (DUF441) YEY1_05895 PF13718 GNAT acetyltransferase 2 YEY1_05895 PF05127 Helicase YEY1_05895 PF17176 tRNA-binding domain YEY1_05910 PF02230 Phospholipase/Carboxylesterase YEY1_05915 PF03245 Bacteriophage Rz lysis protein YEY1_05945 PF13505 Outer membrane protein beta-barrel domain YEY1_05955 PF13980 Uncharacterised protein family (UPF0370) YEY1_05960 PF02557 D-alanyl-D-alanine carboxypeptidase YEY1_05965 PF07687 Peptidase dimerisation domain YEY1_05965 PF01546 Peptidase family M20/M25/M40 YEY1_05970 PF03960 ArsC family YEY1_05985 PF00873 AcrB/AcrD/AcrF family YEY1_05995 PF00196 Bacterial regulatory proteins, luxR family YEY1_05995 PF00072 Response regulator receiver domain YEY1_06005 PF03927 NapD protein YEY1_06010 PF10518 TAT (twin-arginine translocation) pathway signal sequence YEY1_06010 PF01568 Molydopterin dinucleotide binding domain YEY1_06010 PF00384 Molybdopterin oxidoreductase YEY1_06010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YEY1_06015 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) YEY1_06020 PF03264 NapC/NirT cytochrome c family, N-terminal region YEY1_06025 PF00293 NUDIX domain YEY1_06030 PF01515 Phosphate acetyl/butaryl transferase YEY1_06030 PF03949 Malic enzyme, NAD binding domain YEY1_06030 PF00390 Malic enzyme, N-terminal domain YEY1_06045 PF00854 POT family YEY1_06055 PF07681 DoxX YEY1_06065 PF18807 Tripartite Tc toxins repeat YEY1_06065 PF05785 Rho-activating domain of cytotoxic necrotizing factor YEY1_06070 PF03279 Bacterial lipid A biosynthesis acyltransferase YEY1_06075 PF00072 Response regulator receiver domain YEY1_06075 PF00196 Bacterial regulatory proteins, luxR family YEY1_06080 PF00512 His Kinase A (phospho-acceptor) domain YEY1_06080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_06085 PF13247 4Fe-4S dicluster domain YEY1_06095 PF01568 Molydopterin dinucleotide binding domain YEY1_06095 PF00384 Molybdopterin oxidoreductase YEY1_06095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YEY1_06105 PF01594 AI-2E family transporter YEY1_06115 PF00196 Bacterial regulatory proteins, luxR family YEY1_06120 PF01266 FAD dependent oxidoreductase YEY1_06125 PF13991 BssS protein family YEY1_06130 PF06183 DinI-like family YEY1_06135 PF01979 Amidohydrolase family YEY1_06140 PF03992 Antibiotic biosynthesis monooxygenase YEY1_06145 PF10150 Ribonuclease E/G family YEY1_06145 PF00575 S1 RNA binding domain YEY1_06145 PF10150 Ribonuclease E/G family YEY1_06145 PF12111 Polyribonucleotide phosphorylase C terminal YEY1_06145 PF12111 Polyribonucleotide phosphorylase C terminal YEY1_06145 PF00575 S1 RNA binding domain YEY1_06155 PF00849 RNA pseudouridylate synthase YEY1_06155 PF01479 S4 domain YEY1_06160 PF02545 Maf-like protein YEY1_06165 PF02620 Large ribosomal RNA subunit accumulation protein YceD YEY1_06170 PF01783 Ribosomal L32p protein family YEY1_06175 PF02504 Fatty acid synthesis protein YEY1_06180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal YEY1_06180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YEY1_06185 PF00698 Acyl transferase domain YEY1_06195 PF00550 Phosphopantetheine attachment site YEY1_06200 PF02801 Beta-ketoacyl synthase, C-terminal domain YEY1_06200 PF00109 Beta-ketoacyl synthase, N-terminal domain YEY1_06210 PF01063 Amino-transferase class IV YEY1_06215 PF02618 YceG-like family YEY1_06220 PF02223 Thymidylate kinase YEY1_06225 PF09115 DNA polymerase III, delta subunit, C terminal YEY1_06230 PF01026 TatD related DNase YEY1_06235 PF00367 phosphotransferase system, EIIB YEY1_06235 PF02378 Phosphotransferase system, EIIC YEY1_06245 PF03412 Peptidase C39 family YEY1_06245 PF00005 ABC transporter YEY1_06245 PF00664 ABC transporter transmembrane region YEY1_06255 PF04055 Radical SAM superfamily YEY1_06255 PF13186 Iron-sulfur cluster-binding domain YEY1_06265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YEY1_06265 PF12793 Sugar transport-related sRNA regulator N-term YEY1_06270 PF08501 Shikimate dehydrogenase substrate binding domain YEY1_06275 PF01230 HIT domain YEY1_06280 PF07233 Protein of unknown function (DUF1425) YEY1_06285 PF13036 Peptidoglycan-synthase activator LpoB YEY1_06285 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YEY1_06290 PF01636 Phosphotransferase enzyme family YEY1_06295 PF00933 Glycosyl hydrolase family 3 N terminal domain YEY1_06300 PF05728 Uncharacterised protein family (UPF0227) YEY1_06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase YEY1_06310 PF05433 Glycine zipper 2TM domain YEY1_06315 PF02559 CarD-like/TRCF domain YEY1_06315 PF00271 Helicase conserved C-terminal domain YEY1_06315 PF03461 TRCF domain YEY1_06315 PF00270 DEAD/DEAH box helicase YEY1_06315 PF17757 UvrB interaction domain YEY1_06320 PF02687 FtsX-like permease family YEY1_06320 PF12704 MacB-like periplasmic core domain YEY1_06325 PF00005 ABC transporter YEY1_06330 PF12704 MacB-like periplasmic core domain YEY1_06330 PF02687 FtsX-like permease family YEY1_06335 PF00480 ROK family YEY1_06340 PF02146 Sir2 family YEY1_06345 PF07687 Peptidase dimerisation domain YEY1_06345 PF01546 Peptidase family M20/M25/M40 YEY1_06350 PF08007 Cupin superfamily protein YEY1_06355 PF08918 PhoQ Sensor YEY1_06355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_06360 PF00486 Transcriptional regulatory protein, C terminal YEY1_06360 PF00072 Response regulator receiver domain YEY1_06370 PF00206 Lyase YEY1_06370 PF08328 Adenylosuccinate lyase C-terminal YEY1_06375 PF04356 Protein of unknown function (DUF489) YEY1_06385 PF00293 NUDIX domain YEY1_06390 PF00849 RNA pseudouridylate synthase YEY1_06395 PF00180 Isocitrate/isopropylmalate dehydrogenase YEY1_06435 PF01306 LacY proton/sugar symporter YEY1_06440 PF08244 Glycosyl hydrolases family 32 C terminal YEY1_06440 PF00251 Glycosyl hydrolases family 32 N-terminal domain YEY1_06455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YEY1_06455 PF08447 PAS fold YEY1_06460 PF00817 impB/mucB/samB family YEY1_06460 PF11799 impB/mucB/samB family C-terminal domain YEY1_06460 PF13438 Domain of unknown function (DUF4113) YEY1_06465 PF00717 Peptidase S24-like YEY1_06475 PF01053 Cys/Met metabolism PLP-dependent enzyme YEY1_06480 PF05368 NmrA-like family YEY1_06485 PF01638 HxlR-like helix-turn-helix YEY1_06530 PF00563 EAL domain YEY1_06530 PF01590 GAF domain YEY1_06530 PF00360 Phytochrome region YEY1_06530 PF00990 Diguanylate cyclase, GGDEF domain YEY1_06540 PF03372 Endonuclease/Exonuclease/phosphatase family YEY1_06550 PF00005 ABC transporter YEY1_06550 PF00664 ABC transporter transmembrane region YEY1_06560 PF13520 Amino acid permease YEY1_06570 PF12833 Helix-turn-helix domain YEY1_06575 PF00872 Transposase, Mutator family YEY1_06580 PF10964 Protein of unknown function (DUF2766) YEY1_06585 PF13996 YobH-like protein YEY1_06590 PF13998 MgrB protein YEY1_06595 PF13974 YebO-like protein YEY1_06610 PF00324 Amino acid permease YEY1_06615 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP YEY1_06620 PF10736 Protein of unknown function (DUF2627) YEY1_06625 PF00313 'Cold-shock' DNA-binding domain YEY1_06640 PF13847 Methyltransferase domain YEY1_06650 PF08447 PAS fold YEY1_06650 PF08448 PAS fold YEY1_06650 PF00563 EAL domain YEY1_06650 PF05231 MASE1 YEY1_06650 PF13426 PAS domain YEY1_06650 PF00990 Diguanylate cyclase, GGDEF domain YEY1_06655 PF07715 TonB-dependent Receptor Plug Domain YEY1_06655 PF00593 TonB dependent receptor YEY1_06660 PF02659 Putative manganese efflux pump YEY1_06665 PF06173 Protein of unknown function (DUF986) YEY1_06670 PF03613 PTS system mannose/fructose/sorbose family IID component YEY1_06675 PF03609 PTS system sorbose-specific iic component YEY1_06680 PF03830 PTS system sorbose subfamily IIB component YEY1_06680 PF03610 PTS system fructose IIA component YEY1_06685 PF03741 Integral membrane protein TerC family YEY1_06685 PF03471 Transporter associated domain YEY1_06690 PF02048 Heat-stable enterotoxin ST YEY1_06695 PF03315 Serine dehydratase beta chain YEY1_06695 PF03313 Serine dehydratase alpha chain YEY1_06700 PF00293 NUDIX domain YEY1_06705 PF04715 Anthranilate synthase component I, N terminal region YEY1_06705 PF00425 chorismate binding enzyme YEY1_06710 PF03701 Uncharacterised protein family (UPF0181) YEY1_06715 PF02222 ATP-grasp domain YEY1_06720 PF00270 DEAD/DEAH box helicase YEY1_06720 PF03880 DbpA RNA binding domain YEY1_06720 PF00271 Helicase conserved C-terminal domain YEY1_06725 PF07130 YebG protein YEY1_06735 PF13995 YebF-like protein YEY1_06740 PF00326 Prolyl oligopeptidase family YEY1_06740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain YEY1_06745 PF00929 Exonuclease YEY1_06750 PF00561 alpha/beta hydrolase fold YEY1_06755 PF06440 DNA polymerase III, theta subunit YEY1_06760 PF00210 Ferritin-like domain YEY1_06765 PF04234 CopC domain YEY1_06770 PF05425 Copper resistance protein D YEY1_06775 PF10709 Protein of unknown function (DUF2511) YEY1_06780 PF02899 Phage integrase, N-terminal SAM-like domain YEY1_06780 PF00589 Phage integrase family YEY1_06790 PF04606 Ogr/Delta-like zinc finger YEY1_06830 PF00872 Transposase, Mutator family YEY1_06840 PF08242 Methyltransferase domain YEY1_06845 PF00652 Ricin-type beta-trefoil lectin domain YEY1_06850 PF00872 Transposase, Mutator family YEY1_06870 PF07690 Major Facilitator Superfamily YEY1_06885 PF00324 Amino acid permease YEY1_06890 PF03390 2-hydroxycarboxylate transporter family YEY1_06895 PF00072 Response regulator receiver domain YEY1_06900 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain YEY1_06900 PF17203 Single cache domain 3 YEY1_06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_06900 PF00989 PAS fold YEY1_06905 PF08220 DeoR-like helix-turn-helix domain YEY1_06905 PF00455 DeoR C terminal sensor domain YEY1_06910 PF07005 Sugar-binding N-terminal domain YEY1_06910 PF17042 Nucleotide-binding C-terminal domain YEY1_06920 PF01261 Xylose isomerase-like TIM barrel YEY1_06925 PF04960 Glutaminase YEY1_06940 PF03239 Iron permease FTR1 family YEY1_06945 PF10634 Fe2+ transport protein YEY1_06955 PF00005 ABC transporter YEY1_06955 PF12704 MacB-like periplasmic core domain YEY1_06955 PF02687 FtsX-like permease family YEY1_06965 PF00005 ABC transporter YEY1_06965 PF12704 MacB-like periplasmic core domain YEY1_06965 PF02687 FtsX-like permease family YEY1_06970 PF00578 AhpC/TSA family YEY1_06980 PF03848 Tellurite resistance protein TehB YEY1_06980 PF09313 Domain of unknown function (DUF1971) YEY1_06985 PF03466 LysR substrate binding domain YEY1_06985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_06990 PF01411 tRNA synthetases class II (A) YEY1_06990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YEY1_06990 PF02272 DHHA1 domain YEY1_06995 PF06276 Ferric iron reductase FhuF-like transporter YEY1_06995 PF11575 FhuF 2Fe-2S C-terminal domain YEY1_07000 PF00557 Metallopeptidase family M24 YEY1_07010 PF01522 Polysaccharide deacetylase YEY1_07010 PF14883 Hypothetical glycosyl hydrolase family 13 YEY1_07015 PF00535 Glycosyl transferase family 2 YEY1_07020 PF13994 PgaD-like protein YEY1_07035 PF02562 PhoH-like protein YEY1_07045 PF00750 tRNA synthetases class I (R) YEY1_07045 PF05746 DALR anticodon binding domain YEY1_07045 PF03485 Arginyl tRNA synthetase N terminal domain YEY1_07050 PF06185 YecM protein YEY1_07055 PF03932 CutC family YEY1_07075 PF00924 Mechanosensitive ion channel YEY1_07080 PF02798 Glutathione S-transferase, N-terminal domain YEY1_07080 PF14834 Glutathione S-transferase, C-terminal domain YEY1_07100 PF07351 Protein of unknown function (DUF1480) YEY1_07105 PF08448 PAS fold YEY1_07105 PF00563 EAL domain YEY1_07105 PF08447 PAS fold YEY1_07105 PF00990 Diguanylate cyclase, GGDEF domain YEY1_07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_07145 PF03466 LysR substrate binding domain YEY1_07150 PF02470 MlaD protein YEY1_07155 PF04403 Paraquat-inducible protein A YEY1_07160 PF13185 GAF domain YEY1_07165 PF17516 ProQ C-terminal domain YEY1_07165 PF04352 ProQ/FINO family YEY1_07170 PF17804 Tail specific protease N-terminal domain YEY1_07170 PF03572 Peptidase family S41 YEY1_07170 PF00595 PDZ domain YEY1_07170 PF11818 C-terminal domain of tail specific protease (DUF3340) YEY1_07175 PF01435 Peptidase family M48 YEY1_07185 PF07690 Major Facilitator Superfamily YEY1_07190 PF14583 Oligogalacturonate lyase YEY1_07195 PF09339 IclR helix-turn-helix domain YEY1_07195 PF01614 Bacterial transcriptional regulator YEY1_07200 PF01510 N-acetylmuramoyl-L-alanine amidase YEY1_07215 PF04307 LexA-binding, inner membrane-associated putative hydrolase YEY1_07225 PF06178 Oligogalacturonate-specific porin protein (KdgM) YEY1_07230 PF01547 Bacterial extracellular solute-binding protein YEY1_07235 PF03459 TOBE domain YEY1_07235 PF17912 MalK OB fold domain YEY1_07235 PF00005 ABC transporter YEY1_07240 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_07245 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_07250 PF06917 Periplasmic pectate lyase YEY1_07260 PF04962 KduI/IolB family YEY1_07265 PF07883 Cupin domain YEY1_07270 PF13419 Haloacid dehalogenase-like hydrolase YEY1_07275 PF14002 YniB-like protein YEY1_07280 PF03466 LysR substrate binding domain YEY1_07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_07285 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain YEY1_07285 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain YEY1_07290 PF00378 Enoyl-CoA hydratase/isomerase YEY1_07300 PF01642 Methylmalonyl-CoA mutase YEY1_07300 PF02310 B12 binding domain YEY1_07315 PF00950 ABC 3 transport family YEY1_07320 PF00950 ABC 3 transport family YEY1_07325 PF00005 ABC transporter YEY1_07330 PF01297 Zinc-uptake complex component A periplasmic YEY1_07335 PF01464 Transglycosylase SLT domain YEY1_07340 PF01914 MarC family integral membrane protein YEY1_07365 PF04474 Protein of unknown function (DUF554) YEY1_07370 PF13619 KTSC domain YEY1_07375 PF03129 Anticodon binding domain YEY1_07375 PF02824 TGS domain YEY1_07375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YEY1_07375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YEY1_07380 PF05198 Translation initiation factor IF-3, N-terminal domain YEY1_07380 PF00707 Translation initiation factor IF-3, C-terminal domain YEY1_07385 PF01632 Ribosomal protein L35 YEY1_07390 PF00453 Ribosomal protein L20 YEY1_07395 PF01409 tRNA synthetases class II core domain (F) YEY1_07395 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain YEY1_07400 PF03147 Ferredoxin-fold anticodon binding domain YEY1_07400 PF03483 B3/4 domain YEY1_07400 PF03484 tRNA synthetase B5 domain YEY1_07400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain YEY1_07400 PF01588 Putative tRNA binding domain YEY1_07405 PF00216 Bacterial DNA-binding protein YEY1_07410 PF05154 TM2 domain YEY1_07420 PF01032 FecCD transport family YEY1_07425 PF00255 Glutathione peroxidase YEY1_07430 PF00005 ABC transporter YEY1_07435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YEY1_07440 PF00535 Glycosyl transferase family 2 YEY1_07445 PF00551 Formyl transferase YEY1_07445 PF02911 Formyl transferase, C-terminal domain YEY1_07445 PF01370 NAD dependent epimerase/dehydratase family YEY1_07450 PF01522 Polysaccharide deacetylase YEY1_07455 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase YEY1_07460 PF00892 EamA-like transporter family YEY1_07470 PF00877 NlpC/P60 family YEY1_07475 PF03099 Biotin/lipoate A/B protein ligase family YEY1_07475 PF10437 Bacterial lipoate protein ligase C-terminus YEY1_07480 PF02696 Uncharacterized ACR, YdiU/UPF0061 family YEY1_07485 PF01497 Periplasmic binding protein YEY1_07490 PF05171 Haemin-degrading HemS.ChuX domain YEY1_07495 PF07715 TonB-dependent Receptor Plug Domain YEY1_07495 PF00593 TonB dependent receptor YEY1_07500 PF10636 Hemin uptake protein hemP YEY1_07505 PF00793 DAHP synthetase I family YEY1_07510 PF03618 Kinase/pyrophosphorylase YEY1_07515 PF00391 PEP-utilising enzyme, mobile domain YEY1_07515 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain YEY1_07515 PF02896 PEP-utilising enzyme, TIM barrel domain YEY1_07525 PF01594 AI-2E family transporter YEY1_07530 PF01565 FAD binding domain YEY1_07530 PF02913 FAD linked oxidases, C-terminal domain YEY1_07530 PF13183 4Fe-4S dicluster domain YEY1_07540 PF03061 Thioesterase superfamily YEY1_07550 PF01521 Iron-sulphur cluster biosynthesis YEY1_07555 PF01458 Uncharacterized protein family (UPF0051) YEY1_07560 PF00005 ABC transporter YEY1_07565 PF01458 Uncharacterized protein family (UPF0051) YEY1_07570 PF00266 Aminotransferase class-V YEY1_07575 PF02657 Fe-S metabolism associated domain YEY1_07580 PF01476 LysM domain YEY1_07580 PF03734 L,D-transpeptidase catalytic domain YEY1_07580 PF17969 L,D-transpeptidase C-terminal domain YEY1_07585 PF04728 Lipoprotein leucine-zipper YEY1_07590 PF00224 Pyruvate kinase, barrel domain YEY1_07590 PF02887 Pyruvate kinase, alpha/beta domain YEY1_07605 PF01554 MatE YEY1_07610 PF00677 Lumazine binding domain YEY1_07620 PF07690 Major Facilitator Superfamily YEY1_07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_07625 PF03466 LysR substrate binding domain YEY1_07630 PF00356 Bacterial regulatory proteins, lacI family YEY1_07640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain YEY1_07640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain YEY1_07645 PF00877 NlpC/P60 family YEY1_07650 PF00462 Glutaredoxin YEY1_07660 PF00929 Exonuclease YEY1_07675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YEY1_07680 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YEY1_07685 PF00440 Bacterial regulatory proteins, tetR family YEY1_07685 PF16925 Tetracyclin repressor-like, C-terminal domain YEY1_07690 PF00884 Sulfatase YEY1_07690 PF08019 Phosphoethanolamine transferase EptA/EptB YEY1_07695 PF06945 Protein of unknown function (DUF1289) YEY1_07700 PF00248 Aldo/keto reductase family YEY1_07705 PF04632 Fusaric acid resistance protein family YEY1_07710 PF00529 HlyD membrane-fusion protein of T1SS YEY1_07710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YEY1_07715 PF07869 Protein of unknown function (DUF1656) YEY1_07720 PF01047 MarR family YEY1_07725 PF05433 Glycine zipper 2TM domain YEY1_07730 PF03702 Anhydro-N-acetylmuramic acid kinase YEY1_07735 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme YEY1_07740 PF01243 Pyridoxamine 5'-phosphate oxidase YEY1_07740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region YEY1_07745 PF00579 tRNA synthetases class I (W and Y) YEY1_07745 PF01479 S4 domain YEY1_07750 PF08543 Phosphomethylpyrimidine kinase YEY1_07755 PF00043 Glutathione S-transferase, C-terminal domain YEY1_07755 PF02798 Glutathione S-transferase, N-terminal domain YEY1_07760 PF11656 YjbD family (DUF3811) YEY1_07765 PF04893 Yip1 domain YEY1_07775 PF00854 POT family YEY1_07780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_07780 PF03466 LysR substrate binding domain YEY1_07795 PF00005 ABC transporter YEY1_07800 PF00005 ABC transporter YEY1_07800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YEY1_07805 PF12911 N-terminal TM domain of oligopeptide transport permease C YEY1_07805 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_07810 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_07815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YEY1_07830 PF05433 Glycine zipper 2TM domain YEY1_07835 PF00596 Class II Aldolase and Adducin N-terminal domain YEY1_07845 PF00455 DeoR C terminal sensor domain YEY1_07845 PF08220 DeoR-like helix-turn-helix domain YEY1_07850 PF00923 Transaldolase/Fructose-6-phosphate aldolase YEY1_07855 PF04328 Selenoprotein, putative YEY1_07860 PF02554 Carbon starvation protein CstA YEY1_07860 PF13722 5TM C-terminal transporter carbon starvation CstA YEY1_07865 PF00773 RNB domain YEY1_07865 PF08206 Ribonuclease B OB domain YEY1_07865 PF00575 S1 RNA binding domain YEY1_07875 PF00384 Molybdopterin oxidoreductase YEY1_07895 PF00730 HhH-GPD superfamily base excision DNA repair protein YEY1_07895 PF00633 Helix-hairpin-helix motif YEY1_07895 PF10576 Iron-sulfur binding domain of endonuclease III YEY1_07900 PF02508 Rnf-Nqr subunit, membrane protein YEY1_07905 PF04205 FMN-binding domain YEY1_07910 PF03116 NQR2, RnfD, RnfE family YEY1_07915 PF12833 Helix-turn-helix domain YEY1_07915 PF06445 GyrI-like small molecule binding domain YEY1_07925 PF13237 4Fe-4S dicluster domain YEY1_07925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YEY1_07925 PF13375 RnfC Barrel sandwich hybrid domain YEY1_07925 PF10531 SLBB domain YEY1_07930 PF04060 Putative Fe-S cluster YEY1_07935 PF02508 Rnf-Nqr subunit, membrane protein YEY1_07940 PF10754 Protein of unknown function (DUF2569) YEY1_07945 PF01268 Formate--tetrahydrofolate ligase YEY1_07950 PF03412 Peptidase C39 family YEY1_07950 PF00005 ABC transporter YEY1_07950 PF00664 ABC transporter transmembrane region YEY1_07965 PF02463 RecF/RecN/SMC N terminal domain YEY1_07970 PF02610 L-arabinose isomerase YEY1_07970 PF11762 L-arabinose isomerase C-terminal domain YEY1_07975 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YEY1_07980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YEY1_07985 PF00005 ABC transporter YEY1_07990 PF02653 Branched-chain amino acid transport system / permease component YEY1_07995 PF02311 AraC-like ligand binding domain YEY1_07995 PF12833 Helix-turn-helix domain YEY1_08000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YEY1_08000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YEY1_08005 PF13593 SBF-like CPA transporter family (DUF4137) YEY1_08010 PF00962 Adenosine/AMP deaminase YEY1_08015 PF00155 Aminotransferase class I and II YEY1_08030 PF00132 Bacterial transferase hexapeptide (six repeats) YEY1_08035 PF06097 Bacterial protein of unknown function (DUF945) YEY1_08040 PF01238 Phosphomannose isomerase type I YEY1_08045 PF00206 Lyase YEY1_08045 PF10415 Fumarase C C-terminus YEY1_08065 PF05472 DNA replication terminus site-binding protein (Ter protein) YEY1_08080 PF07690 Major Facilitator Superfamily YEY1_08085 PF03466 LysR substrate binding domain YEY1_08085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_08090 PF00480 ROK family YEY1_08100 PF00654 Voltage gated chloride channel YEY1_08110 PF06649 Protein of unknown function (DUF1161) YEY1_08115 PF06932 Protein of unknown function (DUF1283) YEY1_08125 PF02694 Uncharacterised BCR, YnfA/UPF0060 family YEY1_08130 PF00106 short chain dehydrogenase YEY1_08180 PF03958 Bacterial type II/III secretion system short domain YEY1_08180 PF00263 Bacterial type II and III secretion system protein YEY1_08235 PF02798 Glutathione S-transferase, N-terminal domain YEY1_08265 PF01037 Lrp/AsnC ligand binding domain YEY1_08270 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_08295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_08295 PF03466 LysR substrate binding domain YEY1_08305 PF02661 Fic/DOC family YEY1_08305 PF13784 Fic/DOC family N-terminal YEY1_08315 PF01048 Phosphorylase superfamily YEY1_08315 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus YEY1_08320 PF00356 Bacterial regulatory proteins, lacI family YEY1_08325 PF00459 Inositol monophosphatase family YEY1_08360 PF01510 N-acetylmuramoyl-L-alanine amidase YEY1_08375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YEY1_08375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YEY1_08375 PF00205 Thiamine pyrophosphate enzyme, central domain YEY1_08380 PF01842 ACT domain YEY1_08385 PF13419 Haloacid dehalogenase-like hydrolase YEY1_08405 PF00294 pfkB family carbohydrate kinase YEY1_08410 PF00245 Alkaline phosphatase YEY1_08420 PF06445 GyrI-like small molecule binding domain YEY1_08435 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YEY1_08435 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YEY1_08440 PF00027 Cyclic nucleotide-binding domain YEY1_08440 PF13545 Crp-like helix-turn-helix domain YEY1_08445 PF00582 Universal stress protein family YEY1_08450 PF02233 NAD(P) transhydrogenase beta subunit YEY1_08455 PF05222 Alanine dehydrogenase/PNT, N-terminal domain YEY1_08455 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch YEY1_08455 PF01262 Alanine dehydrogenase/PNT, C-terminal domain YEY1_08465 PF07338 Protein of unknown function (DUF1471) YEY1_08470 PF13520 Amino acid permease YEY1_08480 PF00072 Response regulator receiver domain YEY1_08480 PF00486 Transcriptional regulatory protein, C terminal YEY1_08485 PF00512 His Kinase A (phospho-acceptor) domain YEY1_08485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_08485 PF00672 HAMP domain YEY1_08500 PF00089 Trypsin YEY1_08515 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold YEY1_08515 PF00270 DEAD/DEAH box helicase YEY1_08515 PF04408 Helicase associated domain (HA2) YEY1_08515 PF00271 Helicase conserved C-terminal domain YEY1_08515 PF11898 Domain of unknown function (DUF3418) YEY1_08520 PF02525 Flavodoxin-like fold YEY1_08525 PF07027 Protein of unknown function (DUF1318) YEY1_08530 PF13617 YnbE-like lipoprotein YEY1_08535 PF11739 Dicarboxylate transport YEY1_08540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YEY1_08540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YEY1_08545 PF03891 Domain of unknown function (DUF333) YEY1_08550 PF02308 MgtC family YEY1_08555 PF00893 Small Multidrug Resistance protein YEY1_08560 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II YEY1_08560 PF10371 Domain of unknown function YEY1_08560 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg YEY1_08560 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase YEY1_08560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YEY1_08565 PF00388 Phosphatidylinositol-specific phospholipase C, X domain YEY1_08570 PF01171 PP-loop family YEY1_08575 PF01544 CorA-like Mg2+ transporter protein YEY1_08580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YEY1_08585 PF00246 Zinc carboxypeptidase YEY1_08590 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YEY1_08590 PF13378 Enolase C-terminal domain-like YEY1_08595 PF08534 Redoxin YEY1_08605 PF00158 Sigma-54 interaction domain YEY1_08605 PF18024 Helix-turn-helix domain YEY1_08620 PF05128 Domain of unknown function (DUF697) YEY1_08625 PF04317 YcjX-like family, DUF463 YEY1_08635 PF04024 PspC domain YEY1_08640 PF06667 Phage shock protein B YEY1_08645 PF04012 PspA/IM30 family YEY1_08650 PF00158 Sigma-54 interaction domain YEY1_08650 PF02954 Bacterial regulatory protein, Fis family YEY1_08660 PF02917 Pertussis toxin, subunit 1 YEY1_08670 PF02371 Transposase IS116/IS110/IS902 family YEY1_08670 PF01548 Transposase YEY1_08675 PF01253 Translation initiation factor SUI1 YEY1_08680 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family YEY1_08685 PF07338 Protein of unknown function (DUF1471) YEY1_08695 PF01381 Helix-turn-helix YEY1_08695 PF07883 Cupin domain YEY1_08705 PF18073 Rubredoxin metal binding domain YEY1_08710 PF06305 Lipopolysaccharide assembly protein A domain YEY1_08715 PF01569 PAP2 superfamily YEY1_08720 PF00925 GTP cyclohydrolase II YEY1_08725 PF00330 Aconitase family (aconitate hydratase) YEY1_08725 PF00694 Aconitase C-terminal domain YEY1_08735 PF03466 LysR substrate binding domain YEY1_08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_08740 PF01751 Toprim domain YEY1_08740 PF01396 Topoisomerase DNA binding C4 zinc finger YEY1_08740 PF01131 DNA topoisomerase YEY1_08740 PF08272 Topoisomerase I zinc-ribbon-like YEY1_08745 PF10692 Protein of unknown function (DUF2498) YEY1_08750 PF08496 Peptidase family S49 N-terminal YEY1_08750 PF01343 Peptidase family S49 YEY1_08755 PF00106 short chain dehydrogenase YEY1_08760 PF12557 Cob(I)alamin adenosyltransferase N terminal YEY1_08760 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YEY1_08770 PF01479 S4 domain YEY1_08770 PF00849 RNA pseudouridylate synthase YEY1_08775 PF01300 Telomere recombination YEY1_08780 PF02811 PHP domain YEY1_08790 PF00425 chorismate binding enzyme YEY1_08790 PF04715 Anthranilate synthase component I, N terminal region YEY1_08795 PF00117 Glutamine amidotransferase class-I YEY1_08800 PF00591 Glycosyl transferase family, a/b domain YEY1_08800 PF02885 Glycosyl transferase family, helical bundle domain YEY1_08805 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase YEY1_08805 PF00218 Indole-3-glycerol phosphate synthase YEY1_08810 PF00291 Pyridoxal-phosphate dependent enzyme YEY1_08815 PF00290 Tryptophan synthase alpha chain YEY1_08825 PF03922 OmpW family YEY1_08830 PF03692 Putative zinc- or iron-chelating domain YEY1_08845 PF04279 Intracellular septation protein A YEY1_08850 PF03061 Thioesterase superfamily YEY1_08855 PF03544 Gram-negative bacterial TonB protein C-terminal YEY1_08860 PF03795 YCII-related domain YEY1_08885 PF13091 PLD-like domain YEY1_08885 PF13396 Phospholipase_D-nuclease N-terminal YEY1_08890 PF04269 Protein of unknown function, DUF440 YEY1_08895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YEY1_08895 PF00005 ABC transporter YEY1_08900 PF00005 ABC transporter YEY1_08900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YEY1_08905 PF12911 N-terminal TM domain of oligopeptide transport permease C YEY1_08905 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_08910 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_08915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YEY1_08920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YEY1_08925 PF01914 MarC family integral membrane protein YEY1_08935 PF00465 Iron-containing alcohol dehydrogenase YEY1_08935 PF00171 Aldehyde dehydrogenase family YEY1_08940 PF00265 Thymidine kinase YEY1_08950 PF00816 H-NS histone family YEY1_08955 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YEY1_08955 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YEY1_08955 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YEY1_08965 PF01734 Patatin-like phospholipase YEY1_08975 PF02810 SEC-C motif YEY1_08980 PF01842 ACT domain YEY1_08980 PF00551 Formyl transferase YEY1_08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_08995 PF03466 LysR substrate binding domain YEY1_09000 PF03372 Endonuclease/Exonuclease/phosphatase family YEY1_09005 PF00293 NUDIX domain YEY1_09010 PF07383 Protein of unknown function (DUF1496) YEY1_09015 PF01131 DNA topoisomerase YEY1_09015 PF01751 Toprim domain YEY1_09020 PF00586 AIR synthase related protein, N-terminal domain YEY1_09020 PF02769 AIR synthase related protein, C-terminal domain YEY1_09025 PF00881 Nitroreductase family YEY1_09030 PF01343 Peptidase family S49 YEY1_09035 PF17763 Glutaminase/Asparaginase C-terminal domain YEY1_09035 PF00710 Asparaginase, N-terminal YEY1_09040 PF00857 Isochorismatase family YEY1_09050 PF07023 Protein of unknown function (DUF1315) YEY1_09055 PF01641 SelR domain YEY1_09060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YEY1_09060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YEY1_09065 PF01263 Aldose 1-epimerase YEY1_09070 PF06629 MltA-interacting protein MipA YEY1_09080 PF06798 PrkA serine protein kinase C-terminal domain YEY1_09080 PF08298 PrkA AAA domain YEY1_09085 PF04285 Protein of unknown function (DUF444) YEY1_09100 PF03466 LysR substrate binding domain YEY1_09100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_09105 PF05726 Pirin C-terminal cupin domain YEY1_09105 PF02678 Pirin YEY1_09110 PF00563 EAL domain YEY1_09110 PF00990 Diguanylate cyclase, GGDEF domain YEY1_09110 PF13426 PAS domain YEY1_09115 PF07690 Major Facilitator Superfamily YEY1_09120 PF01168 Alanine racemase, N-terminal domain YEY1_09120 PF00842 Alanine racemase, C-terminal domain YEY1_09130 PF01266 FAD dependent oxidoreductase YEY1_09135 PF04293 SpoVR like protein YEY1_09140 PF07840 FadR C-terminal domain YEY1_09140 PF00392 Bacterial regulatory proteins, gntR family YEY1_09145 PF06450 Bacterial Na+/H+ antiporter B (NhaB) YEY1_09150 PF02600 Disulfide bond formation protein DsbB YEY1_09170 PF03692 Putative zinc- or iron-chelating domain YEY1_09175 PF01557 Fumarylacetoacetate (FAA) hydrolase family YEY1_09180 PF13406 Transglycosylase SLT domain YEY1_09185 PF05166 YcgL domain YEY1_09195 PF05209 Septum formation inhibitor MinC, N-terminal domain YEY1_09195 PF03775 Septum formation inhibitor MinC, C-terminal domain YEY1_09200 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YEY1_09205 PF03776 Septum formation topological specificity factor MinE YEY1_09210 PF01612 3'-5' exonuclease YEY1_09210 PF00570 HRDC domain YEY1_09215 PF00501 AMP-binding enzyme YEY1_09215 PF13193 AMP-binding enzyme C-terminal domain YEY1_09220 PF03843 Outer membrane lipoprotein Slp family YEY1_09225 PF00814 Glycoprotease family YEY1_09230 PF13307 Helicase C-terminal domain YEY1_09230 PF04851 Type III restriction enzyme, res subunit YEY1_09235 PF01042 Endoribonuclease L-PSP YEY1_09240 PF00893 Small Multidrug Resistance protein YEY1_09245 PF00893 Small Multidrug Resistance protein YEY1_09255 PF01081 KDPG and KHG aldolase YEY1_09260 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain YEY1_09260 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain YEY1_09265 PF01380 SIS domain YEY1_09265 PF01418 Helix-turn-helix domain, rpiR family YEY1_09270 PF00224 Pyruvate kinase, barrel domain YEY1_09270 PF02887 Pyruvate kinase, alpha/beta domain YEY1_09280 PF03279 Bacterial lipid A biosynthesis acyltransferase YEY1_09285 PF08525 Opacity-associated protein A N-terminal motif YEY1_09285 PF01551 Peptidase family M23 YEY1_09285 PF01476 LysM domain YEY1_09290 PF01297 Zinc-uptake complex component A periplasmic YEY1_09295 PF00005 ABC transporter YEY1_09300 PF00950 ABC 3 transport family YEY1_09305 PF00854 POT family YEY1_09310 PF05491 RuvB C-terminal winged helix domain YEY1_09310 PF17864 RuvB AAA lid domain YEY1_09310 PF05496 Holliday junction DNA helicase RuvB P-loop domain YEY1_09315 PF01330 RuvA N terminal domain YEY1_09315 PF07499 RuvA, C-terminal domain YEY1_09320 PF02075 Crossover junction endodeoxyribonuclease RuvC YEY1_09330 PF01709 Transcriptional regulator YEY1_09335 PF00293 NUDIX domain YEY1_09340 PF00152 tRNA synthetases class II (D, K and N) YEY1_09340 PF02938 GAD domain YEY1_09340 PF01336 OB-fold nucleic acid binding domain YEY1_09350 PF00857 Isochorismatase family YEY1_09355 PF01904 Protein of unknown function DUF72 YEY1_09360 PF01124 MAPEG family YEY1_09365 PF13649 Methyltransferase domain YEY1_09370 PF08003 Protein of unknown function (DUF1698) YEY1_09385 PF08220 DeoR-like helix-turn-helix domain YEY1_09385 PF00455 DeoR C terminal sensor domain YEY1_09390 PF08013 Tagatose 6 phosphate kinase YEY1_09395 PF03830 PTS system sorbose subfamily IIB component YEY1_09400 PF03609 PTS system sorbose-specific iic component YEY1_09405 PF03613 PTS system mannose/fructose/sorbose family IID component YEY1_09410 PF03610 PTS system fructose IIA component YEY1_09415 PF01380 SIS domain YEY1_09420 PF01116 Fructose-bisphosphate aldolase class-II YEY1_09425 PF01551 Peptidase family M23 YEY1_09425 PF01476 LysM domain YEY1_09450 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment YEY1_09455 PF05962 HutD YEY1_09460 PF01979 Amidohydrolase family YEY1_09465 PF07702 UTRA domain YEY1_09465 PF00392 Bacterial regulatory proteins, gntR family YEY1_09470 PF01979 Amidohydrolase family YEY1_09485 PF00267 Gram-negative porin YEY1_09500 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family YEY1_09505 PF04996 Succinylarginine dihydrolase YEY1_09510 PF00171 Aldehyde dehydrogenase family YEY1_09515 PF04958 Arginine N-succinyltransferase beta subunit YEY1_09520 PF00202 Aminotransferase class-III YEY1_09525 PF00392 Bacterial regulatory proteins, gntR family YEY1_09525 PF00155 Aminotransferase class I and II YEY1_09530 PF01654 Cytochrome bd terminal oxidase subunit I YEY1_09535 PF02322 Cytochrome bd terminal oxidase subunit II YEY1_09545 PF07730 Histidine kinase YEY1_09545 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term YEY1_09545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_09545 PF00672 HAMP domain YEY1_09550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_09550 PF03466 LysR substrate binding domain YEY1_09565 PF07690 Major Facilitator Superfamily YEY1_09575 PF01699 Sodium/calcium exchanger protein YEY1_09580 PF03023 Lipid II flippase MurJ YEY1_09585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YEY1_09590 PF04337 Protein of unknown function, DUF480 YEY1_09595 PF13302 Acetyltransferase (GNAT) domain YEY1_09610 PF07690 Major Facilitator Superfamily YEY1_09615 PF07273 Protein of unknown function (DUF1439) YEY1_09620 PF02613 Nitrate reductase delta subunit YEY1_09625 PF02811 PHP domain YEY1_09630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YEY1_09640 PF03009 Glycerophosphoryl diester phosphodiesterase family YEY1_09650 PF00990 Diguanylate cyclase, GGDEF domain YEY1_09655 PF00916 Sulfate permease family YEY1_09655 PF01740 STAS domain YEY1_09660 PF00793 DAHP synthetase I family YEY1_09665 PF13369 Transglutaminase-like superfamily YEY1_09670 PF04247 Invasion gene expression up-regulator, SirB YEY1_09675 PF17827 PrmC N-terminal domain YEY1_09675 PF13847 Methyltransferase domain YEY1_09680 PF03462 PCRF domain YEY1_09680 PF00472 RF-1 domain YEY1_09685 PF01488 Shikimate / quinate 5-dehydrogenase YEY1_09685 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain YEY1_09685 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain YEY1_09690 PF03550 Outer membrane lipoprotein LolB YEY1_09695 PF00288 GHMP kinases N terminal domain YEY1_09695 PF08544 GHMP kinases C terminal YEY1_09700 PF14572 Phosphoribosyl synthetase-associated domain YEY1_09700 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase YEY1_09710 PF10762 Protein of unknown function (DUF2583) YEY1_09715 PF01195 Peptidyl-tRNA hydrolase YEY1_09725 PF06071 Protein of unknown function (DUF933) YEY1_09725 PF01926 50S ribosome-binding GTPase YEY1_09730 PF00144 Beta-lactamase YEY1_09735 PF03466 LysR substrate binding domain YEY1_09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_09740 PF04391 Protein of unknown function (DUF533) YEY1_09745 PF00561 alpha/beta hydrolase fold YEY1_09750 PF00959 Phage lysozyme YEY1_09760 PF10753 Toxin GhoT_OrtT YEY1_09765 PF06530 Phage antitermination protein Q YEY1_09780 PF00132 Bacterial transferase hexapeptide (six repeats) YEY1_09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_09790 PF03466 LysR substrate binding domain YEY1_09890 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ YEY1_09895 PF04221 RelB antitoxin YEY1_09915 PF04754 Putative transposase, YhgA-like YEY1_09925 PF01695 IstB-like ATP binding protein YEY1_09935 PF00872 Transposase, Mutator family YEY1_09965 PF01066 CDP-alcohol phosphatidyltransferase YEY1_09970 PF01541 GIY-YIG catalytic domain YEY1_09970 PF08459 UvrC Helix-hairpin-helix N-terminal YEY1_09970 PF02151 UvrB/uvrC motif YEY1_09975 PF00196 Bacterial regulatory proteins, luxR family YEY1_09975 PF00072 Response regulator receiver domain YEY1_09980 PF10769 Protein of unknown function (DUF2594) YEY1_09985 PF06942 GlpM protein YEY1_09995 PF02806 Alpha amylase, C-terminal all-beta domain YEY1_09995 PF00128 Alpha amylase, catalytic domain YEY1_10010 PF08241 Methyltransferase domain YEY1_10020 PF00589 Phage integrase family YEY1_10030 PF00324 Amino acid permease YEY1_10035 PF08362 YcdC-like protein, C-terminal region YEY1_10035 PF00440 Bacterial regulatory proteins, tetR family YEY1_10045 PF00857 Isochorismatase family YEY1_10050 PF01042 Endoribonuclease L-PSP YEY1_10055 PF12697 Alpha/beta hydrolase family YEY1_10060 PF00881 Nitroreductase family YEY1_10065 PF01613 Flavin reductase like domain YEY1_10080 PF01344 Kelch motif YEY1_10090 PF03358 NADPH-dependent FMN reductase YEY1_10095 PF04261 Dyp-type peroxidase family YEY1_10100 PF13473 Cupredoxin-like domain YEY1_10100 PF09375 Imelysin YEY1_10105 PF03239 Iron permease FTR1 family YEY1_10115 PF05638 Type VI secretion system effector, Hcp YEY1_10135 PF00474 Sodium:solute symporter family YEY1_10140 PF01619 Proline dehydrogenase YEY1_10140 PF14850 DNA-binding domain of Proline dehydrogenase YEY1_10140 PF18327 Proline utilization A proline dehydrogenase N-terminal domain YEY1_10140 PF00171 Aldehyde dehydrogenase family YEY1_10170 PF00291 Pyridoxal-phosphate dependent enzyme YEY1_10175 PF02899 Phage integrase, N-terminal SAM-like domain YEY1_10180 PF04542 Sigma-70 region 2 YEY1_10180 PF04539 Sigma-70 region 3 YEY1_10180 PF04545 Sigma-70, region 4 YEY1_10190 PF00700 Bacterial flagellin C-terminal helical region YEY1_10190 PF00669 Bacterial flagellin N-terminal helical region YEY1_10190 PF08884 Flagellin D3 domain YEY1_10195 PF07195 Flagellar hook-associated protein 2 C-terminus YEY1_10195 PF02465 Flagellar hook-associated protein 2 N-terminus YEY1_10195 PF07196 Flagellin hook IN motif YEY1_10200 PF02561 Flagellar protein FliS YEY1_10205 PF05400 Flagellar protein FliT YEY1_10210 PF12833 Helix-turn-helix domain YEY1_10215 PF01966 HD domain YEY1_10220 PF00730 HhH-GPD superfamily base excision DNA repair protein YEY1_10230 PF06183 DinI-like family YEY1_10250 PF12167 Arm DNA-binding domain YEY1_10250 PF00589 Phage integrase family YEY1_10255 PF02049 Flagellar hook-basal body complex protein FliE YEY1_10260 PF01514 Secretory protein of YscJ/FliF family YEY1_10260 PF08345 Flagellar M-ring protein C-terminal YEY1_10265 PF01706 FliG C-terminal domain YEY1_10265 PF14841 FliG middle domain YEY1_10265 PF14842 FliG N-terminal domain YEY1_10270 PF02108 Flagellar assembly protein FliH YEY1_10275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YEY1_10275 PF18269 T3SS EscN ATPase C-terminal domain YEY1_10280 PF02050 Flagellar FliJ protein YEY1_10285 PF02120 Flagellar hook-length control protein FliK YEY1_10290 PF03748 Flagellar basal body-associated protein FliL YEY1_10295 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YEY1_10295 PF02154 Flagellar motor switch protein FliM YEY1_10300 PF16973 Flagellar motor switch protein FliN N-terminal YEY1_10300 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YEY1_10305 PF04347 Flagellar biosynthesis protein, FliO YEY1_10310 PF00813 FliP family YEY1_10315 PF01313 Bacterial export proteins, family 3 YEY1_10320 PF01311 Bacterial export proteins, family 1 YEY1_10325 PF00669 Bacterial flagellin N-terminal helical region YEY1_10330 PF00460 Flagella basal body rod protein YEY1_10330 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YEY1_10335 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase YEY1_10335 PF10135 Rod binding protein YEY1_10340 PF02119 Flagellar P-ring protein YEY1_10345 PF02107 Flagellar L-ring protein YEY1_10350 PF00460 Flagella basal body rod protein YEY1_10350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YEY1_10355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YEY1_10355 PF00460 Flagella basal body rod protein YEY1_10360 PF07559 Flagellar basal body protein FlaE YEY1_10360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YEY1_10360 PF00460 Flagella basal body rod protein YEY1_10370 PF13861 FlgD Tudor-like domain YEY1_10370 PF03963 Flagellar hook capping protein - N-terminal region YEY1_10370 PF13860 FlgD Ig-like domain YEY1_10375 PF00460 Flagella basal body rod protein YEY1_10375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YEY1_10380 PF00460 Flagella basal body rod protein YEY1_10385 PF17656 FlgA N-terminal domain YEY1_10385 PF13144 Chaperone for flagella basal body P-ring formation YEY1_10390 PF04316 Anti-sigma-28 factor, FlgM YEY1_10395 PF05130 FlgN protein YEY1_10400 PF07979 Intimin C-type lectin domain YEY1_10400 PF02369 Bacterial Ig-like domain (group 1) YEY1_10400 PF09134 Invasin, domain 3 YEY1_10400 PF11924 Inverse autotransporter, beta-domain YEY1_10410 PF06366 Flagellar protein FlhE YEY1_10415 PF00771 FHIPEP family YEY1_10420 PF01312 FlhB HrpN YscU SpaS Family YEY1_10430 PF04344 Chemotaxis phosphatase, CheZ YEY1_10435 PF00072 Response regulator receiver domain YEY1_10440 PF01339 CheB methylesterase YEY1_10440 PF00072 Response regulator receiver domain YEY1_10445 PF03705 CheR methyltransferase, all-alpha domain YEY1_10445 PF01739 CheR methyltransferase, SAM binding domain YEY1_10450 PF02203 Tar ligand binding domain homologue YEY1_10450 PF00672 HAMP domain YEY1_10450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YEY1_10455 PF02203 Tar ligand binding domain homologue YEY1_10455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YEY1_10455 PF00672 HAMP domain YEY1_10465 PF01584 CheW-like domain YEY1_10470 PF09078 CheY binding YEY1_10470 PF02895 Signal transducing histidine kinase, homodimeric domain YEY1_10470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_10470 PF01627 Hpt domain YEY1_10470 PF01584 CheW-like domain YEY1_10475 PF00691 OmpA family YEY1_10475 PF13677 Membrane MotB of proton-channel complex MotA/MotB YEY1_10480 PF01618 MotA/TolQ/ExbB proton channel family YEY1_10485 PF05280 Flagellar transcriptional activator (FlhC) YEY1_10490 PF05247 Flagellar transcriptional activator (FlhD) YEY1_10495 PF00582 Universal stress protein family YEY1_10500 PF16884 N-terminal domain of oxidoreductase YEY1_10500 PF00107 Zinc-binding dehydrogenase YEY1_10505 PF00690 Cation transporter/ATPase, N-terminus YEY1_10505 PF00689 Cation transporting ATPase, C-terminus YEY1_10510 PF02308 MgtC family YEY1_10525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YEY1_10525 PF00672 HAMP domain YEY1_10525 PF02203 Tar ligand binding domain homologue YEY1_10530 PF10781 Dextransucrase DSRB YEY1_10535 PF00313 'Cold-shock' DNA-binding domain YEY1_10540 PF00356 Bacterial regulatory proteins, lacI family YEY1_10545 PF02929 Beta galactosidase small chain YEY1_10545 PF02836 Glycosyl hydrolases family 2, TIM barrel domain YEY1_10545 PF00703 Glycosyl hydrolases family 2 YEY1_10545 PF02837 Glycosyl hydrolases family 2, sugar binding domain YEY1_10545 PF16353 Domain of unknown function(DUF4981) YEY1_10550 PF00107 Zinc-binding dehydrogenase YEY1_10550 PF16197 Ketoacyl-synthetase C-terminal extension YEY1_10550 PF08240 Alcohol dehydrogenase GroES-like domain YEY1_10550 PF00109 Beta-ketoacyl synthase, N-terminal domain YEY1_10550 PF02801 Beta-ketoacyl synthase, C-terminal domain YEY1_10550 PF00698 Acyl transferase domain YEY1_10550 PF08659 KR domain YEY1_10550 PF14765 Polyketide synthase dehydratase YEY1_10550 PF00550 Phosphopantetheine attachment site YEY1_10555 PF10777 Inner membrane protein YlaC YEY1_10570 PF14001 YdfZ protein YEY1_10575 PF00328 Histidine phosphatase superfamily (branch 2) YEY1_10580 PF00483 Nucleotidyl transferase YEY1_10590 PF00999 Sodium/hydrogen exchanger family YEY1_10590 PF03471 Transporter associated domain YEY1_10590 PF02080 TrkA-C domain YEY1_10600 PF00765 Autoinducer synthase YEY1_10605 PF03472 Autoinducer binding domain YEY1_10605 PF00196 Bacterial regulatory proteins, luxR family YEY1_10615 PF03918 Cytochrome C biogenesis protein YEY1_10620 PF08534 Redoxin YEY1_10625 PF01578 Cytochrome C assembly protein YEY1_10625 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal YEY1_10630 PF03916 Polysulphide reductase, NrfD YEY1_10635 PF00037 4Fe-4S binding domain YEY1_10635 PF13247 4Fe-4S dicluster domain YEY1_10640 PF13435 Cytochrome c554 and c-prime YEY1_10640 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) YEY1_10645 PF02335 Cytochrome c552 YEY1_10660 PF04358 DsrC like protein YEY1_10665 PF00708 Acylphosphatase YEY1_10680 PF17785 PUA-like domain YEY1_10680 PF10672 S-adenosylmethionine-dependent methyltransferase YEY1_10685 PF08755 Hemimethylated DNA-binding protein YccV like YEY1_10690 PF13380 CoA binding domain YEY1_10695 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) YEY1_10700 PF02142 MGS-like domain YEY1_10705 PF13361 UvrD-like helicase C-terminal domain YEY1_10705 PF00580 UvrD/REP helicase N-terminal domain YEY1_10705 PF12462 DNA helicase IV / RNA helicase N terminal YEY1_10710 PF03733 Inner membrane component domain YEY1_10715 PF12805 FUSC-like inner membrane protein yccS YEY1_10720 PF04994 TfoX C-terminal domain YEY1_10720 PF04993 TfoX N-terminal domain YEY1_10725 PF03846 Cell division inhibitor SulA YEY1_10730 PF00691 OmpA family YEY1_10730 PF01389 OmpA-like transmembrane domain YEY1_10735 PF17414 MatP C-terminal ribbon-helix-helix domain YEY1_10735 PF06303 MatP N-terminal domain YEY1_10740 PF05362 Lon protease (S16) C-terminal proteolytic domain YEY1_10740 PF13654 AAA domain YEY1_10745 PF07977 FabA-like domain YEY1_10755 PF00109 Beta-ketoacyl synthase, N-terminal domain YEY1_10755 PF02801 Beta-ketoacyl synthase, C-terminal domain YEY1_10760 PF04957 Ribosome modulation factor YEY1_10765 PF03886 ABC-type transport auxiliary lipoprotein component YEY1_10770 PF02470 MlaD protein YEY1_10775 PF04403 Paraquat-inducible protein A YEY1_10780 PF16326 ABC transporter C-terminal domain YEY1_10780 PF00005 ABC transporter YEY1_10780 PF12848 ABC transporter YEY1_10785 PF01170 Putative RNA methylase family UPF0020 YEY1_10785 PF10672 S-adenosylmethionine-dependent methyltransferase YEY1_10785 PF02926 THUMP domain YEY1_10790 PF03476 MOSC N-terminal beta barrel domain YEY1_10790 PF03473 MOSC domain YEY1_10790 PF00111 2Fe-2S iron-sulfur cluster binding domain YEY1_10795 PF07126 Cell-division protein ZapC YEY1_10800 PF01180 Dihydroorotate dehydrogenase YEY1_10805 PF01433 Peptidase family M1 domain YEY1_10805 PF11940 Domain of unknown function (DUF3458) Ig-like fold YEY1_10805 PF17432 Domain of unknown function (DUF3458_C) ARM repeats YEY1_10815 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain YEY1_10815 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family YEY1_10820 PF01336 OB-fold nucleic acid binding domain YEY1_10820 PF00152 tRNA synthetases class II (D, K and N) YEY1_10825 PF00267 Gram-negative porin YEY1_10830 PF00155 Aminotransferase class I and II YEY1_10835 PF00563 EAL domain YEY1_10835 PF12792 CSS motif domain associated with EAL YEY1_10840 PF00753 Metallo-beta-lactamase superfamily YEY1_10845 PF05951 Bacterial protein of unknown function (DUF882) YEY1_10850 PF03734 L,D-transpeptidase catalytic domain YEY1_10850 PF01471 Putative peptidoglycan binding domain YEY1_10855 PF04310 MukB N-terminal YEY1_10855 PF16330 MukB hinge domain YEY1_10860 PF04288 MukE-like family YEY1_10865 PF03882 MukF winged-helix domain YEY1_10865 PF17192 MukF middle domain YEY1_10865 PF17193 MukF C-terminal domain YEY1_10875 PF02698 DUF218 domain YEY1_10880 PF01636 Phosphotransferase enzyme family YEY1_10885 PF02348 Cytidylyltransferase YEY1_10890 PF03966 Trm112p-like protein YEY1_10900 PF00313 'Cold-shock' DNA-binding domain YEY1_10905 PF00313 'Cold-shock' DNA-binding domain YEY1_10915 PF07063 Domain of unknown function (DUF1338) YEY1_10920 PF02606 Tetraacyldisaccharide-1-P 4'-kinase YEY1_10925 PF00664 ABC transporter transmembrane region YEY1_10925 PF00005 ABC transporter YEY1_10930 PF00753 Metallo-beta-lactamase superfamily YEY1_10930 PF03772 Competence protein YEY1_10935 PF00216 Bacterial DNA-binding protein YEY1_10940 PF00575 S1 RNA binding domain YEY1_10945 PF02224 Cytidylate kinase YEY1_10950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YEY1_10955 PF00266 Aminotransferase class-V YEY1_10960 PF04239 Protein of unknown function (DUF421) YEY1_10965 PF17763 Glutaminase/Asparaginase C-terminal domain YEY1_10965 PF00710 Asparaginase, N-terminal YEY1_10970 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding YEY1_10970 PF18381 YcaO cyclodehydratase C-terminal domain YEY1_10985 PF01226 Formate/nitrite transporter YEY1_10990 PF01228 Glycine radical YEY1_10990 PF02901 Pyruvate formate lyase-like YEY1_10995 PF04055 Radical SAM superfamily YEY1_11000 PF07690 Major Facilitator Superfamily YEY1_11005 PF00872 Transposase, Mutator family YEY1_11015 PF02403 Seryl-tRNA synthetase N-terminal domain YEY1_11015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) YEY1_11020 PF12002 MgsA AAA+ ATPase C terminal YEY1_11020 PF16193 AAA C-terminal domain YEY1_11020 PF00004 ATPase family associated with various cellular activities (AAA) YEY1_11025 PF03548 Outer membrane lipoprotein carrier protein LolA YEY1_11030 PF13491 4TM region of DNA translocase FtsK/SpoIIIE YEY1_11030 PF17854 FtsK alpha domain YEY1_11030 PF09397 Ftsk gamma domain YEY1_11030 PF01580 FtsK/SpoIIIE family YEY1_11035 PF01037 Lrp/AsnC ligand binding domain YEY1_11040 PF07992 Pyridine nucleotide-disulphide oxidoreductase YEY1_11045 PF00664 ABC transporter transmembrane region YEY1_11045 PF00005 ABC transporter YEY1_11050 PF00664 ABC transporter transmembrane region YEY1_11050 PF00005 ABC transporter YEY1_11055 PF03588 Leucyl/phenylalanyl-tRNA protein transferase YEY1_11060 PF01176 Translation initiation factor 1A / IF-1 YEY1_11065 PF17871 AAA lid domain YEY1_11065 PF07724 AAA domain (Cdc48 subfamily) YEY1_11065 PF10431 C-terminal, D2-small domain, of ClpB protein YEY1_11065 PF02861 Clp amino terminal domain, pathogenicity island component YEY1_11065 PF00004 ATPase family associated with various cellular activities (AAA) YEY1_11070 PF02617 ATP-dependent Clp protease adaptor protein ClpS YEY1_11075 PF00313 'Cold-shock' DNA-binding domain YEY1_11080 PF02687 FtsX-like permease family YEY1_11080 PF12704 MacB-like periplasmic core domain YEY1_11080 PF00005 ABC transporter YEY1_11085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YEY1_11090 PF04393 Protein of unknown function (DUF535) YEY1_11095 PF11398 Protein of unknown function (DUF2813) YEY1_11100 PF03956 Lysine exporter LysO YEY1_11105 PF03063 Prismane/CO dehydrogenase family YEY1_11110 PF00175 Oxidoreductase NAD-binding domain YEY1_11110 PF00111 2Fe-2S iron-sulfur cluster binding domain YEY1_11110 PF00970 Oxidoreductase FAD-binding domain YEY1_11115 PF00205 Thiamine pyrophosphate enzyme, central domain YEY1_11115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YEY1_11115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YEY1_11120 PF04072 Leucine carboxyl methyltransferase YEY1_11125 PF01212 Beta-eliminating lyase YEY1_11130 PF13460 NAD(P)H-binding YEY1_11130 PF11066 Protein of unknown function (DUF2867) YEY1_11135 PF01370 NAD dependent epimerase/dehydratase family YEY1_11140 PF12883 Protein of unknown function (DUF3828) YEY1_11150 PF00005 ABC transporter YEY1_11155 PF00497 Bacterial extracellular solute-binding proteins, family 3 YEY1_11160 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_11165 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_11170 PF00497 Bacterial extracellular solute-binding proteins, family 3 YEY1_11175 PF05958 tRNA (Uracil-5-)-methyltransferase YEY1_11180 PF10767 Protein of unknown function (DUF2593) YEY1_11185 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_11190 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_11195 PF00005 ABC transporter YEY1_11195 PF08402 TOBE domain YEY1_11200 PF13416 Bacterial extracellular solute-binding protein YEY1_11205 PF10722 Putative bacterial sensory transduction regulator YEY1_11210 PF07214 Protein of unknown function (DUF1418) YEY1_11215 PF00462 Glutaredoxin YEY1_11220 PF06826 Predicted Permease Membrane Region YEY1_11220 PF02080 TrkA-C domain YEY1_11230 PF01569 PAP2 superfamily YEY1_11235 PF01791 DeoC/LacD family aldolase YEY1_11240 PF00455 DeoR C terminal sensor domain YEY1_11240 PF08220 DeoR-like helix-turn-helix domain YEY1_11250 PF03315 Serine dehydratase beta chain YEY1_11250 PF03313 Serine dehydratase alpha chain YEY1_11265 PF07943 Penicillin-binding protein 5, C-terminal domain YEY1_11265 PF00768 D-alanyl-D-alanine carboxypeptidase YEY1_11270 PF00291 Pyridoxal-phosphate dependent enzyme YEY1_11270 PF00571 CBS domain YEY1_11275 PF01053 Cys/Met metabolism PLP-dependent enzyme YEY1_11280 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_11285 PF00005 ABC transporter YEY1_11285 PF09383 NIL domain YEY1_11290 PF03180 NLPA lipoprotein YEY1_11305 PF13417 Glutathione S-transferase, N-terminal domain YEY1_11305 PF00043 Glutathione S-transferase, C-terminal domain YEY1_11315 PF00593 TonB dependent receptor YEY1_11315 PF07715 TonB-dependent Receptor Plug Domain YEY1_11320 PF00005 ABC transporter YEY1_11325 PF01032 FecCD transport family YEY1_11330 PF00324 Amino acid permease YEY1_11335 PF03466 LysR substrate binding domain YEY1_11335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_11350 PF03601 Conserved hypothetical protein 698 YEY1_11360 PF01261 Xylose isomerase-like TIM barrel YEY1_11365 PF13954 PapC N-terminal domain YEY1_11365 PF13953 PapC C-terminal domain YEY1_11365 PF00577 Outer membrane usher protein YEY1_11370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YEY1_11370 PF02753 Pili assembly chaperone PapD, C-terminal domain YEY1_11380 PF17550 Family of unknown function YEY1_11385 PF00486 Transcriptional regulatory protein, C terminal YEY1_11390 PF02378 Phosphotransferase system, EIIC YEY1_11390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YEY1_11395 PF00294 pfkB family carbohydrate kinase YEY1_11400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YEY1_11400 PF00381 PTS HPr component phosphorylation site YEY1_11405 PF00293 NUDIX domain YEY1_11405 PF13344 Haloacid dehalogenase-like hydrolase YEY1_11410 PF03264 NapC/NirT cytochrome c family, N-terminal region YEY1_11415 PF18364 Molybdopterin oxidoreductase N-terminal domain YEY1_11415 PF01568 Molydopterin dinucleotide binding domain YEY1_11415 PF00384 Molybdopterin oxidoreductase YEY1_11420 PF03692 Putative zinc- or iron-chelating domain YEY1_11425 PF03222 Tryptophan/tyrosine permease family YEY1_11430 PF08207 Elongation factor P (EF-P) KOW-like domain YEY1_11430 PF09285 Elongation factor P, C-terminal YEY1_11430 PF01132 Elongation factor P (EF-P) OB domain YEY1_11435 PF03786 D-mannonate dehydratase (UxuA) YEY1_11445 PF01232 Mannitol dehydrogenase Rossmann domain YEY1_11445 PF08125 Mannitol dehydrogenase C-terminal domain YEY1_11450 PF00392 Bacterial regulatory proteins, gntR family YEY1_11450 PF07729 FCD domain YEY1_11460 PF02492 CobW/HypB/UreG, nucleotide-binding domain YEY1_11460 PF07683 Cobalamin synthesis protein cobW C-terminal domain YEY1_11465 PF01569 PAP2 superfamily YEY1_11470 PF00877 NlpC/P60 family YEY1_11480 PF00563 EAL domain YEY1_11480 PF12792 CSS motif domain associated with EAL YEY1_11485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YEY1_11490 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_11495 PF12911 N-terminal TM domain of oligopeptide transport permease C YEY1_11495 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_11500 PF00005 ABC transporter YEY1_11500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region YEY1_11505 PF13989 YejG-like protein YEY1_11510 PF07690 Major Facilitator Superfamily YEY1_11515 PF01479 S4 domain YEY1_11515 PF00849 RNA pseudouridylate synthase YEY1_11520 PF00271 Helicase conserved C-terminal domain YEY1_11520 PF04851 Type III restriction enzyme, res subunit YEY1_11525 PF01386 Ribosomal L25p family YEY1_11530 PF04245 37-kD nucleoid-associated bacterial protein YEY1_11535 PF07208 Protein of unknown function (DUF1414) YEY1_11540 PF00884 Sulfatase YEY1_11540 PF11893 Domain of unknown function (DUF3413) YEY1_11565 PF00872 Transposase, Mutator family YEY1_11575 PF00232 Glycosyl hydrolase family 1 YEY1_11580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YEY1_11580 PF02378 Phosphotransferase system, EIIC YEY1_11580 PF00367 phosphotransferase system, EIIB YEY1_11585 PF01418 Helix-turn-helix domain, rpiR family YEY1_11585 PF01380 SIS domain YEY1_11595 PF06530 Phage antitermination protein Q YEY1_11605 PF06183 DinI-like family YEY1_11610 PF01278 Omptin family YEY1_11615 PF02743 Cache domain YEY1_11615 PF00672 HAMP domain YEY1_11615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YEY1_11620 PF12706 Beta-lactamase superfamily domain YEY1_11630 PF00144 Beta-lactamase YEY1_11645 PF00267 Gram-negative porin YEY1_11655 PF07690 Major Facilitator Superfamily YEY1_11660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_11660 PF16359 RcsD-ABL domain YEY1_11660 PF01627 Hpt domain YEY1_11665 PF00072 Response regulator receiver domain YEY1_11665 PF00196 Bacterial regulatory proteins, luxR family YEY1_11670 PF00512 His Kinase A (phospho-acceptor) domain YEY1_11670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_11670 PF00072 Response regulator receiver domain YEY1_11670 PF09456 RcsC Alpha-Beta-Loop (ABL) YEY1_11675 PF00521 DNA gyrase/topoisomerase IV, subunit A YEY1_11675 PF03989 DNA gyrase C-terminal domain, beta-propeller YEY1_11685 PF00317 Ribonucleotide reductase, all-alpha domain YEY1_11685 PF02867 Ribonucleotide reductase, barrel domain YEY1_11685 PF03477 ATP cone domain YEY1_11690 PF00268 Ribonucleotide reductase, small chain YEY1_11695 PF00111 2Fe-2S iron-sulfur cluster binding domain YEY1_11700 PF03974 Ecotin YEY1_11725 PF00994 Probable molybdopterin binding domain YEY1_11730 PF03222 Tryptophan/tyrosine permease family YEY1_11735 PF07437 YfaZ precursor YEY1_11740 PF06628 Catalase-related immune-responsive YEY1_11740 PF00199 Catalase YEY1_11745 PF00501 AMP-binding enzyme YEY1_11745 PF13193 AMP-binding enzyme C-terminal domain YEY1_11750 PF13378 Enolase C-terminal domain-like YEY1_11755 PF00378 Enoyl-CoA hydratase/isomerase YEY1_11760 PF12697 Alpha/beta hydrolase family YEY1_11765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YEY1_11765 PF16582 Middle domain of thiamine pyrophosphate YEY1_11765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YEY1_11770 PF00425 chorismate binding enzyme YEY1_11775 PF05957 Bacterial protein of unknown function (DUF883) YEY1_11780 PF00920 Dehydratase family YEY1_11785 PF03928 Haem-degrading YEY1_11790 PF07690 Major Facilitator Superfamily YEY1_11795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YEY1_11795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YEY1_11800 PF00356 Bacterial regulatory proteins, lacI family YEY1_11810 PF00106 short chain dehydrogenase YEY1_11815 PF01202 Shikimate kinase YEY1_11825 PF06496 Protein of unknown function (DUF1097) YEY1_11835 PF00361 Proton-conducting membrane transporter YEY1_11840 PF00361 Proton-conducting membrane transporter YEY1_11845 PF00361 Proton-conducting membrane transporter YEY1_11845 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YEY1_11850 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YEY1_11855 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YEY1_11860 PF12838 4Fe-4S dicluster domain YEY1_11865 PF00146 NADH dehydrogenase YEY1_11870 PF01568 Molydopterin dinucleotide binding domain YEY1_11870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region YEY1_11870 PF00384 Molybdopterin oxidoreductase YEY1_11870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YEY1_11875 PF10531 SLBB domain YEY1_11875 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YEY1_11875 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region YEY1_11885 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YEY1_11885 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit YEY1_11890 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YEY1_11895 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YEY1_11900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_11900 PF03466 LysR substrate binding domain YEY1_11905 PF00155 Aminotransferase class I and II YEY1_11920 PF02080 TrkA-C domain YEY1_11920 PF03600 Citrate transporter YEY1_11930 PF13419 Haloacid dehalogenase-like hydrolase YEY1_11935 PF03887 YfbU domain YEY1_11940 PF04217 Protein of unknown function, DUF412 YEY1_11945 PF00871 Acetokinase family YEY1_11950 PF01515 Phosphate acetyl/butaryl transferase YEY1_11950 PF07085 DRTGG domain YEY1_11955 PF00356 Bacterial regulatory proteins, lacI family YEY1_11955 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family YEY1_11960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YEY1_11970 PF03611 PTS system sugar-specific permease component YEY1_11985 PF00293 NUDIX domain YEY1_11990 PF12850 Calcineurin-like phosphoesterase superfamily domain YEY1_12000 PF01370 NAD dependent epimerase/dehydratase family YEY1_12000 PF08338 Domain of unknown function (DUF1731) YEY1_12015 PF00005 ABC transporter YEY1_12020 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_12025 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_12030 PF00497 Bacterial extracellular solute-binding proteins, family 3 YEY1_12035 PF02441 Flavoprotein YEY1_12040 PF00156 Phosphoribosyl transferase domain YEY1_12045 PF02674 Colicin V production protein YEY1_12050 PF05036 Sporulation related domain YEY1_12055 PF02875 Mur ligase family, glutamate ligase domain YEY1_12055 PF08245 Mur ligase middle domain YEY1_12060 PF17848 Acetyl-coA carboxylase zinc finger domain YEY1_12060 PF01039 Carboxyl transferase domain YEY1_12065 PF09335 SNARE associated Golgi protein YEY1_12070 PF01416 tRNA pseudouridine synthase YEY1_12075 PF01118 Semialdehyde dehydrogenase, NAD binding domain YEY1_12075 PF02774 Semialdehyde dehydrogenase, dimerisation domain YEY1_12080 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YEY1_12080 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YEY1_12080 PF11890 Domain of unknown function (DUF3410) YEY1_12090 PF00892 EamA-like transporter family YEY1_12095 PF00892 EamA-like transporter family YEY1_12100 PF00155 Aminotransferase class I and II YEY1_12105 PF00578 AhpC/TSA family YEY1_12115 PF11412 Disulphide bond corrector protein DsbC YEY1_12115 PF02683 Cytochrome C biogenesis protein transmembrane region YEY1_12130 PF03600 Citrate transporter YEY1_12135 PF00328 Histidine phosphatase superfamily (branch 2) YEY1_12140 PF00356 Bacterial regulatory proteins, lacI family YEY1_12145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit YEY1_12150 PF02378 Phosphotransferase system, EIIC YEY1_12155 PF00232 Glycosyl hydrolase family 1 YEY1_12160 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit YEY1_12170 PF01177 Asp/Glu/Hydantoin racemase YEY1_12180 PF00109 Beta-ketoacyl synthase, N-terminal domain YEY1_12180 PF02801 Beta-ketoacyl synthase, C-terminal domain YEY1_12185 PF01266 FAD dependent oxidoreductase YEY1_12185 PF05430 S-adenosyl-L-methionine-dependent methyltransferase YEY1_12190 PF08891 YfcL protein YEY1_12195 PF04315 Elongation factor P hydroxylase YEY1_12205 PF01925 Sulfite exporter TauE/SafE YEY1_12210 PF03411 Penicillin-insensitive murein endopeptidase YEY1_12215 PF01264 Chorismate synthase YEY1_12220 PF05175 Methyltransferase small domain YEY1_12225 PF01713 Smr domain YEY1_12230 PF00300 Histidine phosphatase superfamily (branch 1) YEY1_12240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YEY1_12240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YEY1_12240 PF00378 Enoyl-CoA hydratase/isomerase YEY1_12245 PF00108 Thiolase, N-terminal domain YEY1_12245 PF02803 Thiolase, C-terminal domain YEY1_12250 PF04175 Protein of unknown function (DUF406) YEY1_12255 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) YEY1_12260 PF04333 MlaA lipoprotein YEY1_12265 PF03918 Cytochrome C biogenesis protein YEY1_12270 PF03918 Cytochrome C biogenesis protein YEY1_12275 PF08534 Redoxin YEY1_12280 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal YEY1_12280 PF01578 Cytochrome C assembly protein YEY1_12285 PF03100 CcmE YEY1_12290 PF04995 Heme exporter protein D (CcmD) YEY1_12295 PF01578 Cytochrome C assembly protein YEY1_12300 PF03379 CcmB protein YEY1_12305 PF00005 ABC transporter YEY1_12310 PF01226 Formate/nitrite transporter YEY1_12330 PF03831 PhnA domain YEY1_12330 PF08274 PhnA Zinc-Ribbon YEY1_12335 PF03551 Transcriptional regulator PadR-like family YEY1_12345 PF00232 Glycosyl hydrolase family 1 YEY1_12350 PF02378 Phosphotransferase system, EIIC YEY1_12350 PF00367 phosphotransferase system, EIIB YEY1_12355 PF00356 Bacterial regulatory proteins, lacI family YEY1_12360 PF04264 YceI-like domain YEY1_12370 PF07859 alpha/beta hydrolase fold YEY1_12370 PF13472 GDSL-like Lipase/Acylhydrolase family YEY1_12390 PF00005 ABC transporter YEY1_12395 PF02405 Permease MlaE YEY1_12400 PF07690 Major Facilitator Superfamily YEY1_12410 PF07969 Amidohydrolase family YEY1_12415 PF00324 Amino acid permease YEY1_12420 PF13406 Transglycosylase SLT domain YEY1_12430 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_12435 PF00005 ABC transporter YEY1_12440 PF01810 LysE type translocator YEY1_12460 PF01292 Prokaryotic cytochrome b561 YEY1_12465 PF00155 Aminotransferase class I and II YEY1_12475 PF07350 Protein of unknown function (DUF1479) YEY1_12480 PF06580 Histidine kinase YEY1_12480 PF07694 5TMR of 5TMR-LYT YEY1_12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_12485 PF00072 Response regulator receiver domain YEY1_12485 PF04397 LytTr DNA-binding domain YEY1_12490 PF07690 Major Facilitator Superfamily YEY1_12500 PF02685 Glucokinase YEY1_12510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_12510 PF03466 LysR substrate binding domain YEY1_12515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YEY1_12515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YEY1_12515 PF00205 Thiamine pyrophosphate enzyme, central domain YEY1_12520 PF00248 Aldo/keto reductase family YEY1_12530 PF01566 Natural resistance-associated macrophage protein YEY1_12535 PF07670 Nucleoside recognition YEY1_12535 PF01773 Na+ dependent nucleoside transporter N-terminus YEY1_12535 PF07662 Na+ dependent nucleoside transporter C-terminus YEY1_12560 PF00749 tRNA synthetases class I (E and Q), catalytic domain YEY1_12590 PF12843 Putative quorum-sensing-regulated virulence factor YEY1_12595 PF12826 Helix-hairpin-helix motif YEY1_12595 PF03119 NAD-dependent DNA ligase C4 zinc finger domain YEY1_12595 PF03120 NAD-dependent DNA ligase OB-fold domain YEY1_12595 PF00533 BRCA1 C Terminus (BRCT) domain YEY1_12595 PF01653 NAD-dependent DNA ligase adenylation domain YEY1_12600 PF04354 ZipA, C-terminal FtsZ-binding domain YEY1_12610 PF00291 Pyridoxal-phosphate dependent enzyme YEY1_12615 PF00381 PTS HPr component phosphorylation site YEY1_12620 PF02896 PEP-utilising enzyme, TIM barrel domain YEY1_12620 PF00391 PEP-utilising enzyme, mobile domain YEY1_12620 PF05524 PEP-utilising enzyme, N-terminal YEY1_12625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YEY1_12630 PF00512 His Kinase A (phospho-acceptor) domain YEY1_12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_12630 PF16527 Two-component sensor protein CpxA, periplasmic domain YEY1_12630 PF00672 HAMP domain YEY1_12635 PF00072 Response regulator receiver domain YEY1_12635 PF00486 Transcriptional regulatory protein, C terminal YEY1_12640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YEY1_12650 PF00291 Pyridoxal-phosphate dependent enzyme YEY1_12655 PF00005 ABC transporter YEY1_12660 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_12665 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_12680 PF07690 Major Facilitator Superfamily YEY1_12690 PF01380 SIS domain YEY1_12690 PF01418 Helix-turn-helix domain, rpiR family YEY1_12695 PF04074 YhcH/YjgK/YiaL YEY1_12700 PF00480 ROK family YEY1_12705 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase YEY1_12710 PF00701 Dihydrodipicolinate synthetase family YEY1_12725 PF04261 Dyp-type peroxidase family YEY1_12730 PF06572 Protein of unknown function (DUF1131) YEY1_12735 PF04076 Bacterial OB fold (BOF) protein YEY1_12740 PF00583 Acetyltransferase (GNAT) family YEY1_12745 PF01218 Coproporphyrinogen III oxidase YEY1_12750 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 YEY1_12770 PF00535 Glycosyl transferase family 2 YEY1_12775 PF04349 Periplasmic glucan biosynthesis protein, MdoG YEY1_12780 PF01757 Acyltransferase family YEY1_12795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YEY1_12800 PF13954 PapC N-terminal domain YEY1_12800 PF13953 PapC C-terminal domain YEY1_12800 PF00577 Outer membrane usher protein YEY1_12820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YEY1_12820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YEY1_12825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YEY1_12825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YEY1_12835 PF06167 Glucose-regulated metallo-peptidase M90 YEY1_12845 PF13356 Arm DNA-binding domain YEY1_12845 PF00589 Phage integrase family YEY1_12850 PF03466 LysR substrate binding domain YEY1_12850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_12855 PF02811 PHP domain YEY1_12860 PF01695 IstB-like ATP binding protein YEY1_12865 PF00665 Integrase core domain YEY1_12880 PF04002 RadC-like JAB domain YEY1_12925 PF00072 Response regulator receiver domain YEY1_12925 PF00196 Bacterial regulatory proteins, luxR family YEY1_12930 PF00497 Bacterial extracellular solute-binding proteins, family 3 YEY1_12930 PF00512 His Kinase A (phospho-acceptor) domain YEY1_12930 PF01627 Hpt domain YEY1_12930 PF00989 PAS fold YEY1_12930 PF00072 Response regulator receiver domain YEY1_12930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_12940 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YEY1_12940 PF02753 Pili assembly chaperone PapD, C-terminal domain YEY1_12945 PF13953 PapC C-terminal domain YEY1_12945 PF00577 Outer membrane usher protein YEY1_12945 PF13954 PapC N-terminal domain YEY1_12955 PF02753 Pili assembly chaperone PapD, C-terminal domain YEY1_12955 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YEY1_12970 PF00849 RNA pseudouridylate synthase YEY1_12975 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) YEY1_12980 PF00381 PTS HPr component phosphorylation site YEY1_12980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YEY1_12985 PF00083 Sugar (and other) transporter YEY1_12995 PF17837 4'-phosphopantetheinyl transferase N-terminal domain YEY1_12995 PF01648 4'-phosphopantetheinyl transferase superfamily YEY1_13005 PF03480 Bacterial extracellular solute-binding protein, family 7 YEY1_13015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component YEY1_13020 PF00939 Sodium:sulfate symporter transmembrane region YEY1_13025 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase YEY1_13030 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase YEY1_13030 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase YEY1_13035 PF04223 Citrate lyase, alpha subunit (CitF) YEY1_13040 PF03328 HpcH/HpaI aldolase/citrate lyase family YEY1_13045 PF06857 Malonate decarboxylase delta subunit (MdcD) YEY1_13050 PF08218 Citrate lyase ligase C-terminal domain YEY1_13055 PF00989 PAS fold YEY1_13055 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain YEY1_13055 PF17203 Single cache domain 3 YEY1_13055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_13060 PF12431 Transcriptional regulator YEY1_13060 PF00072 Response regulator receiver domain YEY1_13065 PF00072 Response regulator receiver domain YEY1_13065 PF00196 Bacterial regulatory proteins, luxR family YEY1_13070 PF07730 Histidine kinase YEY1_13070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_13070 PF05231 MASE1 YEY1_13075 PF07690 Major Facilitator Superfamily YEY1_13085 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_13090 PF08402 TOBE domain YEY1_13090 PF00005 ABC transporter YEY1_13100 PF02558 Ketopantoate reductase PanE/ApbA YEY1_13100 PF08546 Ketopantoate reductase PanE/ApbA C terminal YEY1_13115 PF00106 short chain dehydrogenase YEY1_13125 PF00072 Response regulator receiver domain YEY1_13125 PF01584 CheW-like domain YEY1_13130 PF00144 Beta-lactamase YEY1_13135 PF08220 DeoR-like helix-turn-helix domain YEY1_13135 PF00455 DeoR C terminal sensor domain YEY1_13145 PF02581 Thiamine monophosphate synthase YEY1_13155 PF01554 MatE YEY1_13160 PF00764 Arginosuccinate synthase YEY1_13185 PF04717 Type VI secretion system, phage-baseplate injector YEY1_13230 PF13953 PapC C-terminal domain YEY1_13230 PF00577 Outer membrane usher protein YEY1_13230 PF13954 PapC N-terminal domain YEY1_13235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YEY1_13235 PF02753 Pili assembly chaperone PapD, C-terminal domain YEY1_13240 PF00419 Fimbrial protein YEY1_13245 PF00004 ATPase family associated with various cellular activities (AAA) YEY1_13245 PF07724 AAA domain (Cdc48 subfamily) YEY1_13245 PF17871 AAA lid domain YEY1_13245 PF10431 C-terminal, D2-small domain, of ClpB protein YEY1_13300 PF02277 Phosphoribosyltransferase YEY1_13305 PF00300 Histidine phosphatase superfamily (branch 1) YEY1_13310 PF02654 Cobalamin-5-phosphate synthase YEY1_13315 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase YEY1_13320 PF07685 CobB/CobQ-like glutamine amidotransferase domain YEY1_13325 PF00005 ABC transporter YEY1_13330 PF02361 Cobalt transport protein YEY1_13335 PF02553 Cobalt transport protein component CbiN YEY1_13340 PF01891 Cobalt uptake substrate-specific transmembrane region YEY1_13345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YEY1_13350 PF06180 Cobalt chelatase (CbiK) YEY1_13355 PF02571 Precorrin-6x reductase CbiJ/CobK YEY1_13360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YEY1_13365 PF11760 Cobalamin synthesis G N-terminal YEY1_13365 PF01890 Cobalamin synthesis G C-terminus YEY1_13365 PF11761 Cobalamin biosynthesis central region YEY1_13370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YEY1_13375 PF05175 Methyltransferase small domain YEY1_13380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YEY1_13385 PF01888 CbiD YEY1_13390 PF02570 Precorrin-8X methylmutase YEY1_13395 PF03186 CobD/Cbib protein YEY1_13400 PF07685 CobB/CobQ-like glutamine amidotransferase domain YEY1_13400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain YEY1_13405 PF10114 Sensory domain found in PocR YEY1_13405 PF12833 Helix-turn-helix domain YEY1_13410 PF00230 Major intrinsic protein YEY1_13415 PF00936 BMC domain YEY1_13420 PF00936 BMC domain YEY1_13425 PF02286 Dehydratase large subunit YEY1_13430 PF02288 Dehydratase medium subunit YEY1_13435 PF02287 Dehydratase small subunit YEY1_13440 PF08841 Diol dehydratase reactivase ATPase-like domain YEY1_13440 PF18427 DD-reactivating factor swiveling domain YEY1_13450 PF00936 BMC domain YEY1_13460 PF06130 Phosphate propanoyltransferase YEY1_13470 PF03319 Ethanolamine utilisation protein EutN/carboxysome YEY1_13475 PF01923 Cobalamin adenosyltransferase YEY1_13480 PF00171 Aldehyde dehydrogenase family YEY1_13485 PF00465 Iron-containing alcohol dehydrogenase YEY1_13490 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit YEY1_13490 PF10531 SLBB domain YEY1_13490 PF13375 RnfC Barrel sandwich hybrid domain YEY1_13490 PF13237 4Fe-4S dicluster domain YEY1_13500 PF00936 BMC domain YEY1_13505 PF10662 Ethanolamine utilisation - propanediol utilisation YEY1_13510 PF00871 Acetokinase family YEY1_13515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YEY1_13515 PF14824 Sirohaem biosynthesis protein central YEY1_13515 PF10414 Sirohaem synthase dimerisation region YEY1_13520 PF00155 Aminotransferase class I and II YEY1_13525 PF00288 GHMP kinases N terminal domain YEY1_13535 PF13407 Periplasmic binding protein domain YEY1_13545 PF02653 Branched-chain amino acid transport system / permease component YEY1_13550 PF02653 Branched-chain amino acid transport system / permease component YEY1_13555 PF04363 Protein of unknown function (DUF496) YEY1_13560 PF04632 Fusaric acid resistance protein family YEY1_13565 PF07993 Male sterility protein YEY1_13565 PF00501 AMP-binding enzyme YEY1_13565 PF00550 Phosphopantetheine attachment site YEY1_13570 PF00929 Exonuclease YEY1_13570 PF08411 Exonuclease C-terminal YEY1_13575 PF13520 Amino acid permease YEY1_13585 PF00465 Iron-containing alcohol dehydrogenase YEY1_13595 PF02653 Branched-chain amino acid transport system / permease component YEY1_13600 PF01370 NAD dependent epimerase/dehydratase family YEY1_13610 PF08029 HisG, C-terminal domain YEY1_13610 PF01634 ATP phosphoribosyltransferase YEY1_13615 PF00815 Histidinol dehydrogenase YEY1_13620 PF00155 Aminotransferase class I and II YEY1_13625 PF00475 Imidazoleglycerol-phosphate dehydratase YEY1_13630 PF00117 Glutamine amidotransferase class-I YEY1_13635 PF00977 Histidine biosynthesis protein YEY1_13640 PF00977 Histidine biosynthesis protein YEY1_13645 PF01502 Phosphoribosyl-AMP cyclohydrolase YEY1_13645 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase YEY1_13650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase YEY1_13650 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain YEY1_13660 PF00483 Nucleotidyl transferase YEY1_13665 PF00483 Nucleotidyl transferase YEY1_13680 PF03737 Aldolase/RraA YEY1_13680 PF00180 Isocitrate/isopropylmalate dehydrogenase YEY1_13700 PF00534 Glycosyl transferases group 1 YEY1_13700 PF00535 Glycosyl transferase family 2 YEY1_13705 PF01370 NAD dependent epimerase/dehydratase family YEY1_13710 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase YEY1_13715 PF00005 ABC transporter YEY1_13720 PF01061 ABC-2 type transporter YEY1_13730 PF00535 Glycosyl transferase family 2 YEY1_13735 PF00483 Nucleotidyl transferase YEY1_13750 PF03741 Integral membrane protein TerC family YEY1_13750 PF03471 Transporter associated domain YEY1_13750 PF00571 CBS domain YEY1_13755 PF03606 C4-dicarboxylate anaerobic carrier YEY1_13760 PF05170 AsmA family YEY1_13765 PF00692 dUTPase YEY1_13770 PF00485 Phosphoribulokinase / Uridine kinase family YEY1_13775 PF10609 NUBPL iron-transfer P-loop NTPase YEY1_13780 PF01588 Putative tRNA binding domain YEY1_13780 PF09334 tRNA synthetases class I (M) YEY1_13800 PF07690 Major Facilitator Superfamily YEY1_13805 PF03788 LrgA family YEY1_13810 PF04172 LrgB-like family YEY1_13815 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YEY1_13815 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region YEY1_13825 PF00390 Malic enzyme, N-terminal domain YEY1_13825 PF03949 Malic enzyme, NAD binding domain YEY1_13830 PF02698 DUF218 domain YEY1_13835 PF01455 HupF/HypC family YEY1_13840 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA YEY1_13845 PF12798 4Fe-4S binding domain YEY1_13845 PF00037 4Fe-4S binding domain YEY1_13850 PF00361 Proton-conducting membrane transporter YEY1_13855 PF00146 NADH dehydrogenase YEY1_13860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YEY1_13860 PF00361 Proton-conducting membrane transporter YEY1_13865 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YEY1_13870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus YEY1_13870 PF00361 Proton-conducting membrane transporter YEY1_13875 PF00374 Nickel-dependent hydrogenase YEY1_13875 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit YEY1_13875 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit YEY1_13880 PF12838 4Fe-4S dicluster domain YEY1_13885 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YEY1_13890 PF07450 Formate hydrogenlyase maturation protein HycH YEY1_13895 PF01750 Hydrogenase maturation protease YEY1_13900 PF12800 4Fe-4S binding domain YEY1_13900 PF13247 4Fe-4S dicluster domain YEY1_13905 PF01568 Molydopterin dinucleotide binding domain YEY1_13905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YEY1_13905 PF00384 Molybdopterin oxidoreductase YEY1_13910 PF00158 Sigma-54 interaction domain YEY1_13910 PF01590 GAF domain YEY1_13915 PF02653 Branched-chain amino acid transport system / permease component YEY1_13920 PF00005 ABC transporter YEY1_13925 PF13407 Periplasmic binding protein domain YEY1_13930 PF00356 Bacterial regulatory proteins, lacI family YEY1_13935 PF04235 Protein of unknown function (DUF418) YEY1_13940 PF01227 GTP cyclohydrolase I YEY1_13945 PF06779 Uncharacterised MFS-type transporter YbfB YEY1_13950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_13950 PF03466 LysR substrate binding domain YEY1_13955 PF00107 Zinc-binding dehydrogenase YEY1_13955 PF08240 Alcohol dehydrogenase GroES-like domain YEY1_13960 PF00756 Putative esterase YEY1_13980 PF00005 ABC transporter YEY1_13980 PF02687 FtsX-like permease family YEY1_13980 PF12704 MacB-like periplasmic core domain YEY1_13995 PF00994 Probable molybdopterin binding domain YEY1_13995 PF03454 MoeA C-terminal region (domain IV) YEY1_13995 PF03453 MoeA N-terminal region (domain I and II) YEY1_14000 PF00899 ThiF family YEY1_14010 PF00005 ABC transporter YEY1_14010 PF12848 ABC transporter YEY1_14030 PF13505 Outer membrane protein beta-barrel domain YEY1_14040 PF00892 EamA-like transporter family YEY1_14050 PF02469 Fasciclin domain YEY1_14065 PF13847 Methyltransferase domain YEY1_14070 PF00210 Ferritin-like domain YEY1_14075 PF01258 Prokaryotic dksA/traR C4-type zinc finger YEY1_14080 PF00497 Bacterial extracellular solute-binding proteins, family 3 YEY1_14085 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_14090 PF00005 ABC transporter YEY1_14095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YEY1_14095 PF08447 PAS fold YEY1_14095 PF13426 PAS domain YEY1_14100 PF05971 RNA methyltransferase YEY1_14125 PF02885 Glycosyl transferase family, helical bundle domain YEY1_14130 PF00230 Major intrinsic protein YEY1_14135 PF06733 DEAD_2 YEY1_14135 PF13307 Helicase C-terminal domain YEY1_14145 PF00267 Gram-negative porin YEY1_14155 PF00892 EamA-like transporter family YEY1_14180 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_14185 PF00005 ABC transporter YEY1_14190 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_14195 PF04069 Substrate binding domain of ABC-type glycine betaine transport system YEY1_14205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YEY1_14205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain YEY1_14210 PF00581 Rhodanese-like domain YEY1_14215 PF00005 ABC transporter YEY1_14220 PF00005 ABC transporter YEY1_14225 PF02653 Branched-chain amino acid transport system / permease component YEY1_14230 PF02653 Branched-chain amino acid transport system / permease component YEY1_14240 PF07308 Protein of unknown function (DUF1456) YEY1_14245 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_14250 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_14260 PF00005 ABC transporter YEY1_14265 PF04226 Transglycosylase associated protein YEY1_14275 PF01844 HNH endonuclease YEY1_14280 PF01928 CYTH domain YEY1_14285 PF01565 FAD binding domain YEY1_14285 PF09330 D-lactate dehydrogenase, membrane binding YEY1_14290 PF00768 D-alanyl-D-alanine carboxypeptidase YEY1_14300 PF00571 CBS domain YEY1_14300 PF01769 Divalent cation transporter YEY1_14300 PF03448 MgtE intracellular N domain YEY1_14310 PF01207 Dihydrouridine synthase (Dus) YEY1_14315 PF00271 Helicase conserved C-terminal domain YEY1_14315 PF00270 DEAD/DEAH box helicase YEY1_14320 PF09209 Tetracyclin repressor-like, C-terminal domain YEY1_14320 PF00440 Bacterial regulatory proteins, tetR family YEY1_14325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YEY1_14330 PF00005 ABC transporter YEY1_14345 PF01027 Inhibitor of apoptosis-promoting Bax1 YEY1_14350 PF02391 MoaE protein YEY1_14355 PF02597 ThiS family YEY1_14360 PF01967 MoaC family YEY1_14365 PF04055 Radical SAM superfamily YEY1_14365 PF06463 Molybdenum Cofactor Synthesis C YEY1_14370 PF01933 Uncharacterised protein family UPF0052 YEY1_14375 PF09905 DNA-binding protein VF530 YEY1_14380 PF02151 UvrB/uvrC motif YEY1_14380 PF00271 Helicase conserved C-terminal domain YEY1_14380 PF04851 Type III restriction enzyme, res subunit YEY1_14380 PF12344 Ultra-violet resistance protein B YEY1_14380 PF17757 UvrB interaction domain YEY1_14385 PF00005 ABC transporter YEY1_14395 PF08241 Methyltransferase domain YEY1_14400 PF00155 Aminotransferase class I and II YEY1_14405 PF06968 Biotin and Thiamin Synthesis associated domain YEY1_14405 PF04055 Radical SAM superfamily YEY1_14410 PF00202 Aminotransferase class-III YEY1_14415 PF10282 Lactonase, 7-bladed beta-propeller YEY1_14430 PF00005 ABC transporter YEY1_14430 PF03459 TOBE domain YEY1_14435 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_14445 PF10766 Multidrug efflux pump-associated protein AcrZ YEY1_14450 PF03459 TOBE domain YEY1_14450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_14455 PF00005 ABC transporter YEY1_14465 PF16363 GDP-mannose 4,6 dehydratase YEY1_14470 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain YEY1_14470 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain YEY1_14475 PF00288 GHMP kinases N terminal domain YEY1_14475 PF10509 Galactokinase galactose-binding signature YEY1_14475 PF08544 GHMP kinases C terminal YEY1_14480 PF01263 Aldose 1-epimerase YEY1_14490 PF00082 Subtilase family YEY1_14500 PF01223 DNA/RNA non-specific endonuclease YEY1_14505 PF00300 Histidine phosphatase superfamily (branch 1) YEY1_14510 PF00793 DAHP synthetase I family YEY1_14515 PF01545 Cation efflux family YEY1_14520 PF04973 Nicotinamide mononucleotide transporter YEY1_14525 PF02445 Quinolinate synthetase A protein YEY1_14560 PF16331 TolA binding protein trimerisation YEY1_14560 PF13174 Tetratricopeptide repeat YEY1_14565 PF00691 OmpA family YEY1_14570 PF04052 TolB amino-terminal domain YEY1_14570 PF07676 WD40-like Beta Propeller Repeat YEY1_14575 PF06519 TolA C-terminal YEY1_14575 PF06519 TolA C-terminal YEY1_14580 PF02472 Biopolymer transport protein ExbD/TolR YEY1_14585 PF01618 MotA/TolQ/ExbB proton channel family YEY1_14590 PF03061 Thioesterase superfamily YEY1_14595 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) YEY1_14600 PF08173 Membrane bound YbgT-like protein YEY1_14605 PF02322 Cytochrome bd terminal oxidase subunit II YEY1_14610 PF01654 Cytochrome bd terminal oxidase subunit I YEY1_14615 PF02872 5'-nucleotidase, C-terminal domain YEY1_14615 PF00149 Calcineurin-like phosphoesterase YEY1_14620 PF00549 CoA-ligase YEY1_14620 PF02629 CoA binding domain YEY1_14625 PF00549 CoA-ligase YEY1_14625 PF08442 ATP-grasp domain YEY1_14630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) YEY1_14630 PF02817 e3 binding domain YEY1_14630 PF00364 Biotin-requiring enzyme YEY1_14635 PF16078 2-oxoglutarate dehydrogenase N-terminus YEY1_14635 PF00676 Dehydrogenase E1 component YEY1_14635 PF02779 Transketolase, pyrimidine binding domain YEY1_14635 PF16870 2-oxoglutarate dehydrogenase C-terminal YEY1_14640 PF13085 2Fe-2S iron-sulfur cluster binding domain YEY1_14645 PF02910 Fumarate reductase flavoprotein C-term YEY1_14645 PF00890 FAD binding domain YEY1_14650 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YEY1_14655 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit YEY1_14660 PF00285 Citrate synthase, C-terminal domain YEY1_14670 PF01470 Pyroglutamyl peptidase YEY1_14685 PF03746 LamB/YcsF family YEY1_14690 PF02626 Carboxyltransferase domain, subdomain A and B YEY1_14700 PF01784 NIF3 (NGG1p interacting factor 3) YEY1_14705 PF02112 cAMP phosphodiesterases class-II YEY1_14710 PF00875 DNA photolyase YEY1_14710 PF03441 FAD binding domain of DNA photolyase YEY1_14715 PF08349 Protein of unknown function (DUF1722) YEY1_14720 PF07634 RtxA repeat YEY1_14720 PF16671 Actin cross-linking domain YEY1_14720 PF12146 Serine aminopeptidase, S33 YEY1_14720 PF11647 Membrane Localization Domain YEY1_14720 PF16671 Actin cross-linking domain YEY1_14720 PF12146 Serine aminopeptidase, S33 YEY1_14720 PF11647 Membrane Localization Domain YEY1_14720 PF11713 Peptidase C80 family YEY1_14720 PF07634 RtxA repeat YEY1_14720 PF11713 Peptidase C80 family YEY1_14725 PF02794 RTX toxin acyltransferase family YEY1_14735 PF10725 Protein of unknown function (DUF2517) YEY1_14745 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) YEY1_14750 PF03814 Potassium-transporting ATPase A subunit YEY1_14760 PF02669 K+-transporting ATPase, c chain YEY1_14765 PF02702 Osmosensitive K+ channel His kinase sensor domain YEY1_14765 PF00512 His Kinase A (phospho-acceptor) domain YEY1_14765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_14765 PF13493 Domain of unknown function (DUF4118) YEY1_14765 PF13492 GAF domain YEY1_14770 PF00072 Response regulator receiver domain YEY1_14770 PF00486 Transcriptional regulatory protein, C terminal YEY1_14775 PF00892 EamA-like transporter family YEY1_14785 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YEY1_14785 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II YEY1_14785 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain YEY1_14785 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III YEY1_14790 PF03925 SeqA protein C-terminal domain YEY1_14790 PF17206 SeqA protein N-terminal domain YEY1_14795 PF12697 Alpha/beta hydrolase family YEY1_14800 PF01402 Ribbon-helix-helix protein, copG family YEY1_14805 PF02203 Tar ligand binding domain homologue YEY1_14805 PF00672 HAMP domain YEY1_14805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YEY1_14810 PF00258 Flavodoxin YEY1_14815 PF01475 Ferric uptake regulator family YEY1_14820 PF03173 Putative carbohydrate binding domain YEY1_14820 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain YEY1_14820 PF00728 Glycosyl hydrolase family 20, catalytic domain YEY1_14820 PF02838 Glycosyl hydrolase family 20, domain 2 YEY1_14825 PF13982 YbfN-like lipoprotein YEY1_14830 PF03573 outer membrane porin, OprD family YEY1_14835 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain YEY1_14835 PF00749 tRNA synthetases class I (E and Q), catalytic domain YEY1_14840 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 YEY1_14840 PF00367 phosphotransferase system, EIIB YEY1_14840 PF02378 Phosphotransferase system, EIIC YEY1_14845 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase YEY1_14850 PF01979 Amidohydrolase family YEY1_14855 PF01047 MarR family YEY1_14855 PF00480 ROK family YEY1_14860 PF13344 Haloacid dehalogenase-like hydrolase YEY1_14865 PF00733 Asparagine synthase YEY1_14865 PF13537 Glutamine amidotransferase domain YEY1_14900 PF01494 FAD binding domain YEY1_14905 PF01938 TRAM domain YEY1_14905 PF04055 Radical SAM superfamily YEY1_14905 PF00919 Uncharacterized protein family UPF0004 YEY1_14910 PF02562 PhoH-like protein YEY1_14915 PF02130 Uncharacterized protein family UPF0054 YEY1_14920 PF03471 Transporter associated domain YEY1_14920 PF00571 CBS domain YEY1_14925 PF00795 Carbon-nitrogen hydrolase YEY1_14935 PF00497 Bacterial extracellular solute-binding proteins, family 3 YEY1_14940 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_14945 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_14950 PF00005 ABC transporter YEY1_14955 PF07295 Zinc-ribbon containing domain YEY1_14960 PF13603 Leucyl-tRNA synthetase, Domain 2 YEY1_14960 PF00133 tRNA synthetases class I (I, L, M and V) YEY1_14960 PF08264 Anticodon-binding domain of tRNA YEY1_14965 PF04390 Lipopolysaccharide-assembly YEY1_14970 PF14840 Processivity clamp loader gamma complex DNA pol III C-term YEY1_14970 PF06144 DNA polymerase III, delta subunit YEY1_14975 PF01467 Cytidylyltransferase-like YEY1_14985 PF02590 Predicted SPOUT methyltransferase YEY1_14990 PF03717 Penicillin-binding Protein dimerisation domain YEY1_14990 PF00905 Penicillin binding protein transpeptidase domain YEY1_14995 PF01098 Cell cycle protein YEY1_15000 PF05036 Sporulation related domain YEY1_15000 PF03330 Lytic transglycolase YEY1_15005 PF00768 D-alanyl-D-alanine carboxypeptidase YEY1_15005 PF07943 Penicillin-binding protein 5, C-terminal domain YEY1_15010 PF04359 Protein of unknown function (DUF493) YEY1_15015 PF03099 Biotin/lipoate A/B protein ligase family YEY1_15020 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family YEY1_15020 PF04055 Radical SAM superfamily YEY1_15025 PF02416 mttA/Hcf106 family YEY1_15030 PF05230 MASE2 domain YEY1_15030 PF00990 Diguanylate cyclase, GGDEF domain YEY1_15035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) YEY1_15040 PF00313 'Cold-shock' DNA-binding domain YEY1_15045 PF00313 'Cold-shock' DNA-binding domain YEY1_15050 PF00196 Bacterial regulatory proteins, luxR family YEY1_15060 PF00149 Calcineurin-like phosphoesterase YEY1_15075 PF00005 ABC transporter YEY1_15075 PF00664 ABC transporter transmembrane region YEY1_15080 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YEY1_15085 PF00221 Aromatic amino acid lyase YEY1_15090 PF08007 Cupin superfamily protein YEY1_15105 PF00589 Phage integrase family YEY1_15180 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YEY1_15180 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain YEY1_15190 PF01406 tRNA synthetases class I (C) catalytic domain YEY1_15190 PF09190 DALR domain YEY1_15195 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YEY1_15200 PF00149 Calcineurin-like phosphoesterase YEY1_15205 PF00731 AIR carboxylase YEY1_15210 PF02222 ATP-grasp domain YEY1_15210 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain YEY1_15220 PF00005 ABC transporter YEY1_15225 PF13472 GDSL-like Lipase/Acylhydrolase family YEY1_15230 PF00106 short chain dehydrogenase YEY1_15235 PF00085 Thioredoxin YEY1_15240 PF16200 C-terminal region of band_7 YEY1_15240 PF01145 SPFH domain / Band 7 family YEY1_15245 PF01957 NfeD-like C-terminal, partner-binding YEY1_15250 PF13411 MerR HTH family regulatory protein YEY1_15255 PF00403 Heavy-metal-associated domain YEY1_15260 PF01963 TraB family YEY1_15265 PF04073 Aminoacyl-tRNA editing domain YEY1_15275 PF02872 5'-nucleotidase, C-terminal domain YEY1_15275 PF00149 Calcineurin-like phosphoesterase YEY1_15280 PF07690 Major Facilitator Superfamily YEY1_15285 PF02254 TrkA-N domain YEY1_15285 PF00999 Sodium/hydrogen exchanger family YEY1_15290 PF00294 pfkB family carbohydrate kinase YEY1_15295 PF16363 GDP-mannose 4,6 dehydratase YEY1_15300 PF00534 Glycosyl transferases group 1 YEY1_15300 PF13439 Glycosyltransferase Family 4 YEY1_15305 PF02719 Polysaccharide biosynthesis protein YEY1_15310 PF00953 Glycosyl transferase family 4 YEY1_15320 PF00534 Glycosyl transferases group 1 YEY1_15320 PF13439 Glycosyltransferase Family 4 YEY1_15325 PF00535 Glycosyl transferase family 2 YEY1_15330 PF01501 Glycosyl transferase family 8 YEY1_15330 PF00535 Glycosyl transferase family 2 YEY1_15335 PF01943 Polysaccharide biosynthesis protein YEY1_15340 PF00762 Ferrochelatase YEY1_15345 PF05191 Adenylate kinase, active site lid YEY1_15350 PF00183 Hsp90 protein YEY1_15350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_15355 PF02132 RecR protein YEY1_15355 PF13662 Toprim domain YEY1_15360 PF02575 YbaB/EbfC DNA-binding family YEY1_15365 PF12169 DNA polymerase III subunits gamma and tau domain III YEY1_15365 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding YEY1_15365 PF12170 DNA polymerase III tau subunit V interacting with alpha YEY1_15370 PF00156 Phosphoribosyl transferase domain YEY1_15375 PF04304 Protein of unknown function (DUF454) YEY1_15385 PF10689 Protein of unknown function (DUF2496) YEY1_15390 PF12794 Mechanosensitive ion channel inner membrane domain 1 YEY1_15390 PF00924 Mechanosensitive ion channel YEY1_15390 PF12795 Mechanosensitive ion channel porin domain YEY1_15395 PF02635 DsrE/DsrF-like family YEY1_15400 PF08361 MAATS-type transcriptional repressor, C-terminal region YEY1_15400 PF00440 Bacterial regulatory proteins, tetR family YEY1_15405 PF00529 HlyD membrane-fusion protein of T1SS YEY1_15405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YEY1_15410 PF00873 AcrB/AcrD/AcrF family YEY1_15430 PF01168 Alanine racemase, N-terminal domain YEY1_15435 PF01676 Metalloenzyme superfamily YEY1_15440 PF10941 Protein of unknown function DUF2620 YEY1_15445 PF10797 Protein of unknown function YEY1_15450 PF01197 Ribosomal protein L31 YEY1_15455 PF00444 Ribosomal protein L36 YEY1_15460 PF01297 Zinc-uptake complex component A periplasmic YEY1_15465 PF00950 ABC 3 transport family YEY1_15470 PF00005 ABC transporter YEY1_15485 PF10757 Biofilm formation regulator YbaJ YEY1_15490 PF05321 Haemolysin expression modulating protein YEY1_15500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YEY1_15505 PF09619 Type III secretion system lipoprotein chaperone (YscW) YEY1_15515 PF00909 Ammonium Transporter Family YEY1_15520 PF00543 Nitrogen regulatory protein P-II YEY1_15525 PF00005 ABC transporter YEY1_15525 PF00664 ABC transporter transmembrane region YEY1_15530 PF00664 ABC transporter transmembrane region YEY1_15530 PF00005 ABC transporter YEY1_15535 PF13404 AsnC-type helix-turn-helix domain YEY1_15535 PF01037 Lrp/AsnC ligand binding domain YEY1_15550 PF12793 Sugar transport-related sRNA regulator N-term YEY1_15550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle YEY1_15555 PF06508 Queuosine biosynthesis protein QueC YEY1_15570 PF13145 PPIC-type PPIASE domain YEY1_15575 PF00216 Bacterial DNA-binding protein YEY1_15580 PF00004 ATPase family associated with various cellular activities (AAA) YEY1_15580 PF02190 ATP-dependent protease La (LON) substrate-binding domain YEY1_15580 PF05362 Lon protease (S16) C-terminal proteolytic domain YEY1_15585 PF07724 AAA domain (Cdc48 subfamily) YEY1_15585 PF06689 ClpX C4-type zinc finger YEY1_15585 PF10431 C-terminal, D2-small domain, of ClpB protein YEY1_15590 PF00574 Clp protease YEY1_15595 PF05698 Bacterial trigger factor protein (TF) C-terminus YEY1_15595 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase YEY1_15595 PF05697 Bacterial trigger factor protein (TF) YEY1_15605 PF01722 BolA-like protein YEY1_15610 PF03923 Uncharacterized lipoprotein YEY1_15610 PF08139 Prokaryotic membrane lipoprotein lipid attachment site YEY1_15615 PF07690 Major Facilitator Superfamily YEY1_15620 PF03502 Nucleoside-specific channel-forming protein, Tsx YEY1_15625 PF06481 COX Aromatic Rich Motif YEY1_15625 PF00116 Cytochrome C oxidase subunit II, periplasmic domain YEY1_15630 PF00115 Cytochrome C and Quinol oxidase polypeptide I YEY1_15635 PF00510 Cytochrome c oxidase subunit III YEY1_15640 PF03626 Prokaryotic Cytochrome C oxidase subunit IV YEY1_15645 PF01040 UbiA prenyltransferase family YEY1_15650 PF07690 Major Facilitator Superfamily YEY1_15655 PF04461 Protein of unknown function (DUF520) YEY1_15660 PF02558 Ketopantoate reductase PanE/ApbA YEY1_15660 PF08546 Ketopantoate reductase PanE/ApbA C terminal YEY1_15665 PF01965 DJ-1/PfpI family YEY1_15675 PF02568 Thiamine biosynthesis protein (ThiI) YEY1_15675 PF02926 THUMP domain YEY1_15680 PF02609 Exonuclease VII small subunit YEY1_15685 PF00348 Polyprenyl synthetase YEY1_15690 PF02779 Transketolase, pyrimidine binding domain YEY1_15690 PF13292 1-deoxy-D-xylulose-5-phosphate synthase YEY1_15690 PF02780 Transketolase, C-terminal domain YEY1_15700 PF04608 Phosphatidylglycerophosphatase A YEY1_15705 PF00586 AIR synthase related protein, N-terminal domain YEY1_15705 PF02769 AIR synthase related protein, C-terminal domain YEY1_15710 PF01029 NusB family YEY1_15715 PF00885 6,7-dimethyl-8-ribityllumazine synthase YEY1_15720 PF01872 RibD C-terminal domain YEY1_15720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region YEY1_15725 PF03477 ATP cone domain YEY1_15750 PF02355 Protein export membrane protein YEY1_15750 PF07549 SecD/SecF GG Motif YEY1_15755 PF02355 Protein export membrane protein YEY1_15755 PF13721 SecD export protein N-terminal TM region YEY1_15755 PF07549 SecD/SecF GG Motif YEY1_15760 PF02699 Preprotein translocase subunit YEY1_15765 PF01702 Queuine tRNA-ribosyltransferase YEY1_15780 PF02547 Queuosine biosynthesis protein YEY1_15785 PF04336 Acyl carrier protein phosphodiesterase YEY1_15790 PF00578 AhpC/TSA family YEY1_15790 PF10417 C-terminal domain of 1-Cys peroxiredoxin YEY1_15795 PF01848 Hok/gef family YEY1_15810 PF02903 Alpha amylase, N-terminal ig-like domain YEY1_15810 PF00128 Alpha amylase, catalytic domain YEY1_15815 PF00324 Amino acid permease YEY1_15820 PF05525 Branched-chain amino acid transport protein YEY1_15825 PF12849 PBP superfamily domain YEY1_15830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_15830 PF00512 His Kinase A (phospho-acceptor) domain YEY1_15830 PF00989 PAS fold YEY1_15830 PF11808 Phosphate regulon sensor protein PhoR YEY1_15835 PF00486 Transcriptional regulatory protein, C terminal YEY1_15835 PF00072 Response regulator receiver domain YEY1_15840 PF12320 Type 5 capsule protein repressor C-terminal domain YEY1_15840 PF00149 Calcineurin-like phosphoesterase YEY1_15845 PF13476 AAA domain YEY1_15850 PF00480 ROK family YEY1_15855 PF04381 Putative exonuclease, RdgC YEY1_15860 PF06865 Pyrimidine/purine nucleoside phosphorylase YEY1_15865 PF01202 Shikimate kinase YEY1_15870 PF00593 TonB dependent receptor YEY1_15870 PF07715 TonB-dependent Receptor Plug Domain YEY1_15890 PF08241 Methyltransferase domain YEY1_15905 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain YEY1_15905 PF10091 Putative glucoamylase YEY1_15905 PF06165 Glycosyltransferase family 36 YEY1_15910 PF07317 Flagellar regulator YcgR YEY1_15910 PF07238 PilZ domain YEY1_15915 PF11975 Family 4 glycosyl hydrolase C-terminal domain YEY1_15915 PF02056 Family 4 glycosyl hydrolase YEY1_15920 PF02378 Phosphotransferase system, EIIC YEY1_15920 PF00367 phosphotransferase system, EIIB YEY1_15925 PF00392 Bacterial regulatory proteins, gntR family YEY1_15925 PF07702 UTRA domain YEY1_15930 PF00171 Aldehyde dehydrogenase family YEY1_15935 PF01472 PUA domain YEY1_15935 PF00696 Amino acid kinase family YEY1_15940 PF07417 Sigma factor-binding transcriptional regulator Crl YEY1_15950 PF00156 Phosphoribosyl transferase domain YEY1_15955 PF01546 Peptidase family M20/M25/M40 YEY1_15955 PF07687 Peptidase dimerisation domain YEY1_15960 PF11798 IMS family HHH motif YEY1_15960 PF11799 impB/mucB/samB family C-terminal domain YEY1_15960 PF00817 impB/mucB/samB family YEY1_15970 PF00291 Pyridoxal-phosphate dependent enzyme YEY1_15975 PF08348 YheO-like PAS domain YEY1_15975 PF13309 HTH domain YEY1_15980 PF01820 D-ala D-ala ligase N-terminus YEY1_15980 PF07478 D-ala D-ala ligase C-terminus YEY1_15990 PF03009 Glycerophosphoryl diester phosphodiesterase family YEY1_15995 PF04400 (Na+)-NQR maturation NqrM YEY1_16000 PF02424 ApbE family YEY1_16005 PF00970 Oxidoreductase FAD-binding domain YEY1_16005 PF00111 2Fe-2S iron-sulfur cluster binding domain YEY1_16005 PF00175 Oxidoreductase NAD-binding domain YEY1_16010 PF02508 Rnf-Nqr subunit, membrane protein YEY1_16015 PF02508 Rnf-Nqr subunit, membrane protein YEY1_16020 PF04205 FMN-binding domain YEY1_16025 PF03116 NQR2, RnfD, RnfE family YEY1_16030 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) YEY1_16030 PF11973 NQRA C-terminal domain YEY1_16035 PF03734 L,D-transpeptidase catalytic domain YEY1_16040 PF13230 Glutamine amidotransferases class-II YEY1_16045 PF13580 SIS domain YEY1_16050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain YEY1_16050 PF09317 Domain of unknown function (DUF1974) YEY1_16050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain YEY1_16055 PF18254 HMW1 domain 2 YEY1_16055 PF18071 HMW1C N-terminal YEY1_16065 PF05860 haemagglutination activity domain YEY1_16070 PF08479 POTRA domain, ShlB-type YEY1_16070 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YEY1_16075 PF01636 Phosphotransferase enzyme family YEY1_16080 PF01008 Initiation factor 2 subunit family YEY1_16085 PF03079 ARD/ARD' family YEY1_16095 PF00596 Class II Aldolase and Adducin N-terminal domain YEY1_16100 PF00155 Aminotransferase class I and II YEY1_16105 PF00795 Carbon-nitrogen hydrolase YEY1_16115 PF00266 Aminotransferase class-V YEY1_16120 PF00005 ABC transporter YEY1_16125 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_16130 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_16135 PF00497 Bacterial extracellular solute-binding proteins, family 3 YEY1_16155 PF01425 Amidase YEY1_16170 PF07690 Major Facilitator Superfamily YEY1_16180 PF03591 AzlC protein YEY1_16185 PF05437 Branched-chain amino acid transport protein (AzlD) YEY1_16190 PF01047 MarR family YEY1_16195 PF02321 Outer membrane efflux protein YEY1_16200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YEY1_16200 PF00529 HlyD membrane-fusion protein of T1SS YEY1_16205 PF07690 Major Facilitator Superfamily YEY1_16220 PF08032 RNA 2'-O ribose methyltransferase substrate binding YEY1_16220 PF00588 SpoU rRNA Methylase family YEY1_16225 PF00085 Thioredoxin YEY1_16235 PF00583 Acetyltransferase (GNAT) family YEY1_16235 PF13607 Succinyl-CoA ligase like flavodoxin domain YEY1_16235 PF13380 CoA binding domain YEY1_16240 PF13091 PLD-like domain YEY1_16245 PF10043 Predicted periplasmic lipoprotein (DUF2279) YEY1_16275 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YEY1_16280 PF13525 Outer membrane lipoprotein YEY1_16290 PF00849 RNA pseudouridylate synthase YEY1_16290 PF01479 S4 domain YEY1_16300 PF02861 Clp amino terminal domain, pathogenicity island component YEY1_16300 PF17871 AAA lid domain YEY1_16300 PF07724 AAA domain (Cdc48 subfamily) YEY1_16300 PF00004 ATPase family associated with various cellular activities (AAA) YEY1_16300 PF10431 C-terminal, D2-small domain, of ClpB protein YEY1_16310 PF01817 Chorismate mutase type II YEY1_16310 PF00800 Prephenate dehydratase YEY1_16320 PF02153 Prephenate dehydrogenase YEY1_16320 PF01817 Chorismate mutase type II YEY1_16325 PF00793 DAHP synthetase I family YEY1_16330 PF04397 LytTr DNA-binding domain YEY1_16330 PF00072 Response regulator receiver domain YEY1_16335 PF03605 Anaerobic c4-dicarboxylate membrane transporter YEY1_16340 PF04338 Protein of unknown function, DUF481 YEY1_16345 PF01245 Ribosomal protein L19 YEY1_16350 PF01746 tRNA (Guanine-1)-methyltransferase YEY1_16355 PF01782 RimM N-terminal domain YEY1_16355 PF05239 PRC-barrel domain YEY1_16360 PF00886 Ribosomal protein S16 YEY1_16365 PF02978 Signal peptide binding domain YEY1_16365 PF00448 SRP54-type protein, GTPase domain YEY1_16365 PF02881 SRP54-type protein, helical bundle domain YEY1_16370 PF01578 Cytochrome C assembly protein YEY1_16375 PF03471 Transporter associated domain YEY1_16375 PF00571 CBS domain YEY1_16375 PF01595 Cyclin M transmembrane N-terminal domain YEY1_16380 PF02664 S-Ribosylhomocysteinase (LuxS) YEY1_16385 PF04262 Glutamate-cysteine ligase YEY1_16390 PF09335 SNARE associated Golgi protein YEY1_16395 PF13419 Haloacid dehalogenase-like hydrolase YEY1_16415 PF02599 Global regulator protein family YEY1_16420 PF02272 DHHA1 domain YEY1_16420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain YEY1_16420 PF01411 tRNA synthetases class II (A) YEY1_16425 PF02631 RecX family YEY1_16430 PF00154 recA bacterial DNA recombination protein YEY1_16435 PF02464 Competence-damaged protein YEY1_16440 PF07690 Major Facilitator Superfamily YEY1_16450 PF02613 Nitrate reductase delta subunit YEY1_16455 PF04976 DMSO reductase anchor subunit (DmsC) YEY1_16460 PF13247 4Fe-4S dicluster domain YEY1_16460 PF12800 4Fe-4S binding domain YEY1_16465 PF01568 Molydopterin dinucleotide binding domain YEY1_16465 PF00384 Molybdopterin oxidoreductase YEY1_16465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain YEY1_16470 PF05681 Fumarate hydratase (Fumerase) YEY1_16470 PF05683 Fumarase C-terminus YEY1_16475 PF13458 Periplasmic binding protein YEY1_16480 PF02653 Branched-chain amino acid transport system / permease component YEY1_16485 PF02653 Branched-chain amino acid transport system / permease component YEY1_16485 PF11862 Domain of unknown function (DUF3382) YEY1_16490 PF00005 ABC transporter YEY1_16495 PF00005 ABC transporter YEY1_16515 PF00795 Carbon-nitrogen hydrolase YEY1_16520 PF13936 Helix-turn-helix domain YEY1_16520 PF04198 Putative sugar-binding domain YEY1_16525 PF03610 PTS system fructose IIA component YEY1_16530 PF03830 PTS system sorbose subfamily IIB component YEY1_16535 PF03609 PTS system sorbose-specific iic component YEY1_16540 PF03613 PTS system mannose/fructose/sorbose family IID component YEY1_16545 PF08240 Alcohol dehydrogenase GroES-like domain YEY1_16545 PF00107 Zinc-binding dehydrogenase YEY1_16550 PF01022 Bacterial regulatory protein, arsR family YEY1_16555 PF03144 Elongation factor Tu domain 2 YEY1_16555 PF00009 Elongation factor Tu GTP binding domain YEY1_16555 PF03764 Elongation factor G, domain IV YEY1_16555 PF14492 Elongation Factor G, domain II YEY1_16555 PF00679 Elongation factor G C-terminus YEY1_16570 PF03150 Di-haem cytochrome c peroxidase YEY1_16570 PF00034 Cytochrome c YEY1_16570 PF14376 Haem-binding domain YEY1_16575 PF00155 Aminotransferase class I and II YEY1_16600 PF00109 Beta-ketoacyl synthase, N-terminal domain YEY1_16600 PF02801 Beta-ketoacyl synthase, C-terminal domain YEY1_16605 PF02321 Outer membrane efflux protein YEY1_16610 PF12704 MacB-like periplasmic core domain YEY1_16610 PF02687 FtsX-like permease family YEY1_16610 PF00005 ABC transporter YEY1_16615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YEY1_16620 PF00664 ABC transporter transmembrane region YEY1_16620 PF03412 Peptidase C39 family YEY1_16620 PF00005 ABC transporter YEY1_16645 PF00419 Fimbrial protein YEY1_16650 PF00419 Fimbrial protein YEY1_16660 PF02753 Pili assembly chaperone PapD, C-terminal domain YEY1_16660 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YEY1_16665 PF13953 PapC C-terminal domain YEY1_16665 PF00577 Outer membrane usher protein YEY1_16665 PF13954 PapC N-terminal domain YEY1_16670 PF00419 Fimbrial protein YEY1_16675 PF00419 Fimbrial protein YEY1_16690 PF05188 MutS domain II YEY1_16690 PF01624 MutS domain I YEY1_16690 PF00488 MutS domain V YEY1_16690 PF05190 MutS family domain IV YEY1_16690 PF05192 MutS domain III YEY1_16695 PF00140 Sigma-70 factor, region 1.2 YEY1_16695 PF04539 Sigma-70 region 3 YEY1_16695 PF04542 Sigma-70 region 2 YEY1_16695 PF04545 Sigma-70, region 4 YEY1_16700 PF01551 Peptidase family M23 YEY1_16700 PF01476 LysM domain YEY1_16715 PF01975 Survival protein SurE YEY1_16720 PF01142 tRNA pseudouridine synthase D (TruD) YEY1_16725 PF02542 YgbB family YEY1_16730 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YEY1_16735 PF04977 Septum formation initiator YEY1_16740 PF12084 Protein of unknown function (DUF3561) YEY1_16750 PF00009 Elongation factor Tu GTP binding domain YEY1_16755 PF01507 Phosphoadenosine phosphosulfate reductase family YEY1_16760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YEY1_16760 PF14824 Sirohaem biosynthesis protein central YEY1_16760 PF10414 Sirohaem synthase dimerisation region YEY1_16765 PF04389 Peptidase family M28 YEY1_16785 PF01507 Phosphoadenosine phosphosulfate reductase family YEY1_16790 PF01077 Nitrite and sulphite reductase 4Fe-4S domain YEY1_16790 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain YEY1_16795 PF00175 Oxidoreductase NAD-binding domain YEY1_16795 PF00667 FAD binding domain YEY1_16795 PF00258 Flavodoxin YEY1_16800 PF01242 6-pyruvoyl tetrahydropterin synthase YEY1_16820 PF04055 Radical SAM superfamily YEY1_16825 PF00080 Copper/zinc superoxide dismutase (SODC) YEY1_16855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain YEY1_16855 PF01842 ACT domain YEY1_16855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YEY1_16860 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) YEY1_16865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_16865 PF03466 LysR substrate binding domain YEY1_16870 PF04402 Protein of unknown function (DUF541) YEY1_16875 PF01810 LysE type translocator YEY1_16885 PF05552 Conserved TM helix YEY1_16885 PF00924 Mechanosensitive ion channel YEY1_16890 PF09013 YopH, N-terminal YEY1_16890 PF00102 Protein-tyrosine phosphatase YEY1_16895 PF01116 Fructose-bisphosphate aldolase class-II YEY1_16900 PF00162 Phosphoglycerate kinase YEY1_16905 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain YEY1_16905 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain YEY1_16910 PF02779 Transketolase, pyrimidine binding domain YEY1_16910 PF02780 Transketolase, C-terminal domain YEY1_16910 PF00456 Transketolase, thiamine diphosphate binding domain YEY1_16915 PF01435 Peptidase family M48 YEY1_16920 PF00355 Rieske [2Fe-2S] domain YEY1_16925 PF17944 Arginine decarboxylase C-terminal helical extension YEY1_16925 PF17810 Arginine decarboxylase helical bundle domain YEY1_16925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain YEY1_16930 PF02773 S-adenosylmethionine synthetase, C-terminal domain YEY1_16930 PF02772 S-adenosylmethionine synthetase, central domain YEY1_16930 PF00438 S-adenosylmethionine synthetase, N-terminal domain YEY1_16940 PF04143 Sulphur transport YEY1_16950 PF17283 SprT-like zinc ribbon domain YEY1_16950 PF10263 SprT-like family YEY1_16955 PF04231 Endonuclease I YEY1_16960 PF04452 RNA methyltransferase YEY1_16965 PF02951 Prokaryotic glutathione synthetase, N-terminal domain YEY1_16965 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain YEY1_16970 PF02622 Uncharacterized ACR, COG1678 YEY1_16975 PF03652 Holliday junction resolvase YEY1_16980 PF00795 Carbon-nitrogen hydrolase YEY1_16985 PF04371 Porphyromonas-type peptidyl-arginine deiminase YEY1_16990 PF00437 Type II/IV secretion system protein YEY1_16995 PF01168 Alanine racemase, N-terminal domain YEY1_17000 PF14748 Pyrroline-5-carboxylate reductase dimerisation YEY1_17000 PF03807 NADP oxidoreductase coenzyme F420-dependent YEY1_17005 PF02325 YGGT family YEY1_17010 PF02594 Uncharacterised ACR, YggU family COG1872 YEY1_17015 PF01725 Ham1 family YEY1_17020 PF04055 Radical SAM superfamily YEY1_17020 PF06969 HemN C-terminal domain YEY1_17025 PF11101 Protein of unknown function (DUF2884) YEY1_17030 PF04960 Glutaminase YEY1_17035 PF04320 Protein with unknown function (DUF469) YEY1_17040 PF02390 Putative methyltransferase YEY1_17045 PF00730 HhH-GPD superfamily base excision DNA repair protein YEY1_17045 PF10576 Iron-sulfur binding domain of endonuclease III YEY1_17045 PF00633 Helix-hairpin-helix motif YEY1_17045 PF14815 NUDIX domain YEY1_17050 PF04362 Bacterial Fe(2+) trafficking YEY1_17055 PF01464 Transglycosylase SLT domain YEY1_17055 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain YEY1_17065 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YEY1_17065 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YEY1_17065 PF01276 Orn/Lys/Arg decarboxylase, major domain YEY1_17080 PF00589 Phage integrase family YEY1_17125 PF13520 Amino acid permease YEY1_17130 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain YEY1_17130 PF01276 Orn/Lys/Arg decarboxylase, major domain YEY1_17130 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain YEY1_17145 PF04632 Fusaric acid resistance protein family YEY1_17150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion YEY1_17150 PF00529 HlyD membrane-fusion protein of T1SS YEY1_17170 PF00557 Metallopeptidase family M24 YEY1_17175 PF00005 ABC transporter YEY1_17180 PF01032 FecCD transport family YEY1_17185 PF01032 FecCD transport family YEY1_17190 PF01497 Periplasmic binding protein YEY1_17205 PF00892 EamA-like transporter family YEY1_17210 PF00392 Bacterial regulatory proteins, gntR family YEY1_17210 PF00155 Aminotransferase class I and II YEY1_17225 PF00083 Sugar (and other) transporter YEY1_17225 PF07690 Major Facilitator Superfamily YEY1_17230 PF00356 Bacterial regulatory proteins, lacI family YEY1_17235 PF01156 Inosine-uridine preferring nucleoside hydrolase YEY1_17240 PF02690 Na+/Pi-cotransporter YEY1_17255 PF00083 Sugar (and other) transporter YEY1_17255 PF08946 Osmosensory transporter coiled coil YEY1_17270 PF13533 Biotin-lipoyl like YEY1_17275 PF00563 EAL domain YEY1_17275 PF08448 PAS fold YEY1_17275 PF00990 Diguanylate cyclase, GGDEF domain YEY1_17275 PF08447 PAS fold YEY1_17290 PF02110 Hydroxyethylthiazole kinase family YEY1_17295 PF02661 Fic/DOC family YEY1_17295 PF13784 Fic/DOC family N-terminal YEY1_17300 PF17788 HypF Kae1-like domain YEY1_17300 PF00708 Acylphosphatase YEY1_17300 PF07503 HypF finger YEY1_17300 PF01300 Telomere recombination YEY1_17305 PF02769 AIR synthase related protein, C-terminal domain YEY1_17305 PF00586 AIR synthase related protein, N-terminal domain YEY1_17310 PF01924 Hydrogenase formation hypA family YEY1_17315 PF01455 HupF/HypC family YEY1_17320 PF02492 CobW/HypB/UreG, nucleotide-binding domain YEY1_17325 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA YEY1_17330 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE YEY1_17335 PF01750 Hydrogenase maturation protease YEY1_17340 PF00374 Nickel-dependent hydrogenase YEY1_17345 PF03916 Polysulphide reductase, NrfD YEY1_17350 PF13247 4Fe-4S dicluster domain YEY1_17355 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit YEY1_17355 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal YEY1_17365 PF05433 Glycine zipper 2TM domain YEY1_17370 PF13677 Membrane MotB of proton-channel complex MotA/MotB YEY1_17370 PF00691 OmpA family YEY1_17375 PF01618 MotA/TolQ/ExbB proton channel family YEY1_17380 PF04545 Sigma-70, region 4 YEY1_17380 PF04542 Sigma-70 region 2 YEY1_17400 PF02561 Flagellar protein FliS YEY1_17405 PF07196 Flagellin hook IN motif YEY1_17405 PF02465 Flagellar hook-associated protein 2 N-terminus YEY1_17405 PF07195 Flagellar hook-associated protein 2 C-terminus YEY1_17410 PF00669 Bacterial flagellin N-terminal helical region YEY1_17410 PF00700 Bacterial flagellin C-terminal helical region YEY1_17420 PF18500 CadC C-terminal domain 1 YEY1_17420 PF00486 Transcriptional regulatory protein, C terminal YEY1_17450 PF02119 Flagellar P-ring protein YEY1_17455 PF02107 Flagellar L-ring protein YEY1_17460 PF00460 Flagella basal body rod protein YEY1_17460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YEY1_17465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YEY1_17465 PF00460 Flagella basal body rod protein YEY1_17470 PF07559 Flagellar basal body protein FlaE YEY1_17470 PF00460 Flagella basal body rod protein YEY1_17470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YEY1_17475 PF03963 Flagellar hook capping protein - N-terminal region YEY1_17475 PF13861 FlgD Tudor-like domain YEY1_17475 PF13860 FlgD Ig-like domain YEY1_17480 PF00460 Flagella basal body rod protein YEY1_17480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal YEY1_17485 PF00460 Flagella basal body rod protein YEY1_17520 PF12833 Helix-turn-helix domain YEY1_17525 PF00005 ABC transporter YEY1_17525 PF02687 FtsX-like permease family YEY1_17525 PF12704 MacB-like periplasmic core domain YEY1_17555 PF12833 Helix-turn-helix domain YEY1_17580 PF13532 2OG-Fe(II) oxygenase superfamily YEY1_17605 PF13629 Pilus formation protein N terminal region YEY1_17605 PF00263 Bacterial type II and III secretion system protein YEY1_17605 PF04972 BON domain YEY1_17620 PF00437 Type II/IV secretion system protein YEY1_17655 PF02472 Biopolymer transport protein ExbD/TolR YEY1_17660 PF01618 MotA/TolQ/ExbB proton channel family YEY1_17665 PF01053 Cys/Met metabolism PLP-dependent enzyme YEY1_17670 PF09335 SNARE associated Golgi protein YEY1_17675 PF06719 AraC-type transcriptional regulator N-terminus YEY1_17675 PF12833 Helix-turn-helix domain YEY1_17680 PF00465 Iron-containing alcohol dehydrogenase YEY1_17685 PF00248 Aldo/keto reductase family YEY1_17690 PF08497 Radical SAM N-terminal YEY1_17690 PF11842 Domain of unknown function (DUF3362) YEY1_17690 PF04055 Radical SAM superfamily YEY1_17695 PF07731 Multicopper oxidase YEY1_17695 PF07732 Multicopper oxidase YEY1_17705 PF01553 Acyltransferase YEY1_17710 PF00521 DNA gyrase/topoisomerase IV, subunit A YEY1_17710 PF03989 DNA gyrase C-terminal domain, beta-propeller YEY1_17720 PF02525 Flavodoxin-like fold YEY1_17725 PF03992 Antibiotic biosynthesis monooxygenase YEY1_17730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_17730 PF03466 LysR substrate binding domain YEY1_17735 PF01751 Toprim domain YEY1_17735 PF00204 DNA gyrase B YEY1_17735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_17735 PF00986 DNA gyrase B subunit, carboxyl terminus YEY1_17740 PF05728 Uncharacterised protein family (UPF0227) YEY1_17745 PF00149 Calcineurin-like phosphoesterase YEY1_17750 PF06853 Protein of unknown function (DUF1249) YEY1_17755 PF00293 NUDIX domain YEY1_17760 PF02321 Outer membrane efflux protein YEY1_17765 PF06693 Protein of unknown function (DUF1190) YEY1_17770 PF03738 Glutathionylspermidine synthase preATP-grasp YEY1_17775 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase YEY1_17785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase YEY1_17790 PF04380 Membrane fusogenic activity YEY1_17795 PF13520 Amino acid permease YEY1_17800 PF00294 pfkB family carbohydrate kinase YEY1_17800 PF01467 Cytidylyltransferase-like YEY1_17805 PF08335 GlnD PII-uridylyltransferase YEY1_17805 PF03710 Glutamate-ammonia ligase adenylyltransferase YEY1_17810 PF01928 CYTH domain YEY1_17815 PF08239 Bacterial SH3 domain YEY1_17820 PF12627 Probable RNA and SrmB- binding site of polymerase A YEY1_17820 PF01743 Poly A polymerase head domain YEY1_17820 PF01966 HD domain YEY1_17825 PF02673 Bacitracin resistance protein BacA YEY1_17830 PF02152 Dihydroneopterin aldolase YEY1_17835 PF02660 Glycerol-3-phosphate acyltransferase YEY1_17840 PF00814 Glycoprotease family YEY1_17845 PF01165 Ribosomal protein S21 YEY1_17850 PF10410 DnaB-helicase binding domain of primase YEY1_17850 PF08278 DNA primase DnaG DnaB-binding YEY1_17850 PF08275 DNA primase catalytic core, N-terminal domain YEY1_17850 PF01807 CHC2 zinc finger YEY1_17855 PF00140 Sigma-70 factor, region 1.2 YEY1_17855 PF03979 Sigma-70 factor, region 1.1 YEY1_17855 PF04546 Sigma-70, non-essential region YEY1_17855 PF04542 Sigma-70 region 2 YEY1_17855 PF04545 Sigma-70, region 4 YEY1_17855 PF04539 Sigma-70 region 3 YEY1_17870 PF04606 Ogr/Delta-like zinc finger YEY1_17945 PF06114 IrrE N-terminal-like domain YEY1_18050 PF05840 Bacteriophage replication gene A protein (GPA) YEY1_18075 PF06892 Phage regulatory protein CII (CP76) YEY1_18085 PF07022 Bacteriophage CI repressor helix-turn-helix domain YEY1_18085 PF16452 Bacteriophage CI repressor C-terminal domain YEY1_18090 PF00589 Phage integrase family YEY1_18090 PF02899 Phage integrase, N-terminal SAM-like domain YEY1_18095 PF07075 Protein of unknown function (DUF1343) YEY1_18105 PF01915 Glycosyl hydrolase family 3 C-terminal domain YEY1_18105 PF00933 Glycosyl hydrolase family 3 N terminal domain YEY1_18110 PF01380 SIS domain YEY1_18110 PF01418 Helix-turn-helix domain, rpiR family YEY1_18115 PF13580 SIS domain YEY1_18120 PF02378 Phosphotransferase system, EIIC YEY1_18120 PF00367 phosphotransferase system, EIIB YEY1_18125 PF04960 Glutaminase YEY1_18130 PF13520 Amino acid permease YEY1_18135 PF00282 Pyridoxal-dependent decarboxylase conserved domain YEY1_18150 PF03729 Short repeat of unknown function (DUF308) YEY1_18160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family YEY1_18160 PF07992 Pyridine nucleotide-disulphide oxidoreductase YEY1_18170 PF05175 Methyltransferase small domain YEY1_18175 PF03797 Autotransporter beta-domain YEY1_18190 PF01863 Protein of unknown function DUF45 YEY1_18195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold YEY1_18205 PF03741 Integral membrane protein TerC family YEY1_18210 PF00375 Sodium:dicarboxylate symporter family YEY1_18215 PF10688 Bacterial inner membrane protein YEY1_18220 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus YEY1_18220 PF08666 SAF domain YEY1_18225 PF08125 Mannitol dehydrogenase C-terminal domain YEY1_18225 PF01232 Mannitol dehydrogenase Rossmann domain YEY1_18230 PF02614 Glucuronate isomerase YEY1_18235 PF07690 Major Facilitator Superfamily YEY1_18240 PF07729 FCD domain YEY1_18240 PF00392 Bacterial regulatory proteins, gntR family YEY1_18250 PF09335 SNARE associated Golgi protein YEY1_18255 PF13721 SecD export protein N-terminal TM region YEY1_18265 PF05957 Bacterial protein of unknown function (DUF883) YEY1_18270 PF07332 Putative Actinobacterial Holin-X, holin superfamily III YEY1_18275 PF13997 YqjK-like protein YEY1_18280 PF07681 DoxX YEY1_18285 PF13409 Glutathione S-transferase, N-terminal domain YEY1_18290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_18290 PF03466 LysR substrate binding domain YEY1_18295 PF02678 Pirin YEY1_18295 PF17954 Quercetinase C-terminal cupin domain YEY1_18305 PF00248 Aldo/keto reductase family YEY1_18310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_18310 PF03466 LysR substrate binding domain YEY1_18320 PF13953 PapC C-terminal domain YEY1_18320 PF13954 PapC N-terminal domain YEY1_18320 PF00577 Outer membrane usher protein YEY1_18325 PF02753 Pili assembly chaperone PapD, C-terminal domain YEY1_18325 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YEY1_18340 PF01381 Helix-turn-helix YEY1_18350 PF00145 C-5 cytosine-specific DNA methylase YEY1_18355 PF01695 IstB-like ATP binding protein YEY1_18360 PF00665 Integrase core domain YEY1_18380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases YEY1_18385 PF04348 LppC putative lipoprotein YEY1_18390 PF02021 Uncharacterised protein family UPF0102 YEY1_18395 PF13580 SIS domain YEY1_18400 PF04972 BON domain YEY1_18415 PF00912 Transglycosylase YEY1_18430 PF00512 His Kinase A (phospho-acceptor) domain YEY1_18430 PF01627 Hpt domain YEY1_18430 PF00989 PAS fold YEY1_18430 PF00072 Response regulator receiver domain YEY1_18430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_18430 PF18415 Histidine kinase receptor ArcB trans-membrane domain YEY1_18440 PF01645 Conserved region in glutamate synthase YEY1_18440 PF01493 GXGXG motif YEY1_18440 PF00310 Glutamine amidotransferases class-II YEY1_18440 PF04898 Glutamate synthase central domain YEY1_18445 PF07992 Pyridine nucleotide-disulphide oxidoreductase YEY1_18445 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster YEY1_18460 PF04386 Stringent starvation protein B YEY1_18465 PF02798 Glutathione S-transferase, N-terminal domain YEY1_18465 PF00043 Glutathione S-transferase, C-terminal domain YEY1_18470 PF00380 Ribosomal protein S9/S16 YEY1_18475 PF00572 Ribosomal protein L13 YEY1_18480 PF03969 AFG1-like ATPase YEY1_18485 PF06295 Protein of unknown function (DUF1043) YEY1_18495 PF13180 PDZ domain YEY1_18495 PF00595 PDZ domain YEY1_18500 PF13180 PDZ domain YEY1_18505 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YEY1_18510 PF01722 BolA-like protein YEY1_18515 PF13466 STAS domain YEY1_18520 PF05494 MlaC protein YEY1_18525 PF02470 MlaD protein YEY1_18530 PF02405 Permease MlaE YEY1_18535 PF00005 ABC transporter YEY1_18545 PF01699 Sodium/calcium exchanger protein YEY1_18550 PF00571 CBS domain YEY1_18550 PF01380 SIS domain YEY1_18560 PF06835 Lipopolysaccharide-assembly, LptC-related YEY1_18565 PF03968 OstA-like protein YEY1_18570 PF12399 Branched-chain amino acid ATP-binding cassette transporter YEY1_18570 PF00005 ABC transporter YEY1_18575 PF00309 Sigma-54 factor, Activator interacting domain (AID) YEY1_18575 PF04552 Sigma-54, DNA binding domain YEY1_18575 PF04963 Sigma-54 factor, core binding domain YEY1_18580 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein YEY1_18585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YEY1_18590 PF03668 P-loop ATPase protein family YEY1_18595 PF00381 PTS HPr component phosphorylation site YEY1_18610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain YEY1_18610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain YEY1_18615 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain YEY1_18615 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain YEY1_18620 PF01042 Endoribonuclease L-PSP YEY1_18625 PF14403 Circularly permuted ATP-grasp type 2 YEY1_18630 PF04168 A predicted alpha-helical domain with a conserved ER motif. YEY1_18630 PF14403 Circularly permuted ATP-grasp type 2 YEY1_18645 PF00128 Alpha amylase, catalytic domain YEY1_18645 PF11941 Domain of unknown function (DUF3459) YEY1_18650 PF02378 Phosphotransferase system, EIIC YEY1_18650 PF00367 phosphotransferase system, EIIB YEY1_18655 PF00356 Bacterial regulatory proteins, lacI family YEY1_18665 PF00690 Cation transporter/ATPase, N-terminus YEY1_18665 PF00689 Cation transporting ATPase, C-terminus YEY1_18670 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB YEY1_18675 PF01381 Helix-turn-helix YEY1_18680 PF00874 PRD domain YEY1_18680 PF05043 Mga helix-turn-helix domain YEY1_18680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YEY1_18680 PF08279 HTH domain YEY1_18685 PF10282 Lactonase, 7-bladed beta-propeller YEY1_18690 PF07071 KDGP aldolase YEY1_18695 PF03841 L-seryl-tRNA selenium transferase YEY1_18700 PF01979 Amidohydrolase family YEY1_18730 PF01272 Transcription elongation factor, GreA/GreB, C-term YEY1_18730 PF14760 Rnk N-terminus YEY1_18735 PF07361 Cytochrome b562 YEY1_18745 PF01523 Putative modulator of DNA gyrase YEY1_18750 PF04751 Protein of unknown function (DUF615) YEY1_18755 PF01337 Barstar (barnase inhibitor) YEY1_18765 PF00171 Aldehyde dehydrogenase family YEY1_18770 PF04632 Fusaric acid resistance protein family YEY1_18775 PF13533 Biotin-lipoyl like YEY1_18780 PF07869 Protein of unknown function (DUF1656) YEY1_18785 PF03466 LysR substrate binding domain YEY1_18785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_18800 PF18413 Neuraminidase-like domain YEY1_18800 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain YEY1_18805 PF03534 Salmonella virulence plasmid 65kDa B protein YEY1_18805 PF12256 Insecticide toxin TcdB middle/N-terminal region YEY1_18805 PF12255 Insecticide toxin TcdB middle/C-terminal region YEY1_18810 PF03534 Salmonella virulence plasmid 65kDa B protein YEY1_18810 PF12255 Insecticide toxin TcdB middle/C-terminal region YEY1_18810 PF12256 Insecticide toxin TcdB middle/N-terminal region YEY1_18830 PF14431 YwqJ-like deaminase YEY1_18830 PF18807 Tripartite Tc toxins repeat YEY1_18845 PF01523 Putative modulator of DNA gyrase YEY1_18850 PF00795 Carbon-nitrogen hydrolase YEY1_18855 PF13502 AsmA-like C-terminal region YEY1_18855 PF13116 Protein of unknown function YEY1_18860 PF00575 S1 RNA binding domain YEY1_18860 PF10150 Ribonuclease E/G family YEY1_18865 PF02545 Maf-like protein YEY1_18870 PF04093 rod shape-determining protein MreD YEY1_18875 PF04085 rod shape-determining protein MreC YEY1_18885 PF00990 Diguanylate cyclase, GGDEF domain YEY1_18885 PF17157 Gammaproteobacterial periplasmic sensor domain YEY1_18885 PF00563 EAL domain YEY1_18890 PF08240 Alcohol dehydrogenase GroES-like domain YEY1_18890 PF00107 Zinc-binding dehydrogenase YEY1_18895 PF00174 Oxidoreductase molybdopterin binding domain YEY1_18900 PF01794 Ferric reductase like transmembrane component YEY1_18905 PF01220 Dehydroquinase class II YEY1_18910 PF00364 Biotin-requiring enzyme YEY1_18915 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain YEY1_18915 PF00289 Biotin carboxylase, N-terminal domain YEY1_18915 PF02785 Biotin carboxylase C-terminal domain YEY1_18920 PF06196 Protein of unknown function (DUF997) YEY1_18925 PF00474 Sodium:solute symporter family YEY1_18940 PF01207 Dihydrouridine synthase (Dus) YEY1_18945 PF02954 Bacterial regulatory protein, Fis family YEY1_18950 PF00990 Diguanylate cyclase, GGDEF domain YEY1_18950 PF00072 Response regulator receiver domain YEY1_18955 PF05433 Glycine zipper 2TM domain YEY1_18960 PF00313 'Cold-shock' DNA-binding domain YEY1_18965 PF00313 'Cold-shock' DNA-binding domain YEY1_18975 PF00939 Sodium:sulfate symporter transmembrane region YEY1_18980 PF03279 Bacterial lipid A biosynthesis acyltransferase YEY1_19000 PF00497 Bacterial extracellular solute-binding proteins, family 3 YEY1_19005 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_19010 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_19015 PF00005 ABC transporter YEY1_19025 PF03788 LrgA family YEY1_19030 PF03466 LysR substrate binding domain YEY1_19030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_19035 PF00999 Sodium/hydrogen exchanger family YEY1_19040 PF00860 Permease family YEY1_19055 PF07804 HipA-like C-terminal domain YEY1_19055 PF13657 HipA N-terminal domain YEY1_19060 PF00436 Single-strand binding protein family YEY1_19065 PF17755 UvrA DNA-binding domain YEY1_19065 PF00005 ABC transporter YEY1_19065 PF17760 UvrA interaction domain YEY1_19070 PF04237 YjbR YEY1_19075 PF00155 Aminotransferase class I and II YEY1_19080 PF01168 Alanine racemase, N-terminal domain YEY1_19080 PF00842 Alanine racemase, C-terminal domain YEY1_19085 PF03796 DnaB-like helicase C terminal domain YEY1_19085 PF00772 DnaB-like helicase N terminal domain YEY1_19090 PF00107 Zinc-binding dehydrogenase YEY1_19090 PF08240 Alcohol dehydrogenase GroES-like domain YEY1_19100 PF09583 Phage shock protein G (Phageshock_PspG) YEY1_19105 PF01207 Dihydrouridine synthase (Dus) YEY1_19110 PF01757 Acyltransferase family YEY1_19115 PF01475 Ferric uptake regulator family YEY1_19120 PF05532 CsbD-like YEY1_19125 PF01726 LexA DNA binding domain YEY1_19125 PF00717 Peptidase S24-like YEY1_19130 PF01219 Prokaryotic diacylglycerol kinase YEY1_19135 PF01553 Acyltransferase YEY1_19140 PF01040 UbiA prenyltransferase family YEY1_19145 PF04345 Chorismate lyase YEY1_19155 PF07148 Maltose operon periplasmic protein precursor (MalM) YEY1_19160 PF02264 LamB porin YEY1_19165 PF00005 ABC transporter YEY1_19165 PF17912 MalK OB fold domain YEY1_19175 PF01547 Bacterial extracellular solute-binding protein YEY1_19180 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_19180 PF14785 Maltose transport system permease protein MalF P2 domain YEY1_19185 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_19190 PF06146 Phosphate-starvation-inducible E YEY1_19195 PF00342 Phosphoglucose isomerase YEY1_19200 PF00696 Amino acid kinase family YEY1_19200 PF01842 ACT domain YEY1_19205 PF01758 Sodium Bile acid symporter family YEY1_19210 PF08479 POTRA domain, ShlB-type YEY1_19210 PF17287 POTRA domain YEY1_19210 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB YEY1_19215 PF13332 Hemagglutinin repeat YEY1_19215 PF05860 haemagglutination activity domain YEY1_19220 PF02574 Homocysteine S-methyltransferase YEY1_19220 PF02310 B12 binding domain YEY1_19220 PF02607 B12 binding domain YEY1_19220 PF02965 Vitamin B12 dependent methionine synthase, activation domain YEY1_19220 PF00809 Pterin binding enzyme YEY1_19225 PF01614 Bacterial transcriptional regulator YEY1_19225 PF09339 IclR helix-turn-helix domain YEY1_19230 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) YEY1_19235 PF00463 Isocitrate lyase family YEY1_19240 PF01274 Malate synthase YEY1_19245 PF04204 Homoserine O-succinyltransferase YEY1_19295 PF02142 MGS-like domain YEY1_19295 PF01808 AICARFT/IMPCHase bienzyme YEY1_19300 PF02843 Phosphoribosylglycinamide synthetase, C domain YEY1_19300 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain YEY1_19300 PF02844 Phosphoribosylglycinamide synthetase, N domain YEY1_19305 PF07356 Protein of unknown function (DUF1481) YEY1_19310 PF00216 Bacterial DNA-binding protein YEY1_19315 PF04222 Protein of unknown function (DUF416) YEY1_19320 PF04493 Endonuclease V YEY1_19325 PF01208 Uroporphyrinogen decarboxylase (URO-D) YEY1_19330 PF00293 NUDIX domain YEY1_19330 PF09297 NADH pyrophosphatase zinc ribbon domain YEY1_19335 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ YEY1_19340 PF13667 ThiC-associated domain YEY1_19340 PF01964 Radical SAM ThiC family YEY1_19345 PF02581 Thiamine monophosphate synthase YEY1_19350 PF00899 ThiF family YEY1_19355 PF02597 ThiS family YEY1_19360 PF05690 Thiazole biosynthesis protein ThiG YEY1_19365 PF04055 Radical SAM superfamily YEY1_19365 PF06968 Biotin and Thiamin Synthesis associated domain YEY1_19375 PF04997 RNA polymerase Rpb1, domain 1 YEY1_19375 PF05000 RNA polymerase Rpb1, domain 4 YEY1_19375 PF04983 RNA polymerase Rpb1, domain 3 YEY1_19375 PF04998 RNA polymerase Rpb1, domain 5 YEY1_19375 PF00623 RNA polymerase Rpb1, domain 2 YEY1_19380 PF04563 RNA polymerase beta subunit YEY1_19380 PF00562 RNA polymerase Rpb2, domain 6 YEY1_19380 PF10385 RNA polymerase beta subunit external 1 domain YEY1_19380 PF04565 RNA polymerase Rpb2, domain 3 YEY1_19380 PF04561 RNA polymerase Rpb2, domain 2 YEY1_19380 PF04560 RNA polymerase Rpb2, domain 7 YEY1_19385 PF00542 Ribosomal protein L7/L12 C-terminal domain YEY1_19385 PF16320 Ribosomal protein L7/L12 dimerisation domain YEY1_19390 PF00466 Ribosomal protein L10 YEY1_19395 PF00687 Ribosomal protein L1p/L10e family YEY1_19400 PF00298 Ribosomal protein L11, RNA binding domain YEY1_19400 PF03946 Ribosomal protein L11, N-terminal domain YEY1_19405 PF02357 Transcription termination factor nusG YEY1_19405 PF00467 KOW motif YEY1_19410 PF00584 SecE/Sec61-gamma subunits of protein translocation complex YEY1_19415 PF03143 Elongation factor Tu C-terminal domain YEY1_19415 PF00009 Elongation factor Tu GTP binding domain YEY1_19415 PF03144 Elongation factor Tu domain 2 YEY1_19450 PF00485 Phosphoribulokinase / Uridine kinase family YEY1_19455 PF08279 HTH domain YEY1_19455 PF03099 Biotin/lipoate A/B protein ligase family YEY1_19455 PF02237 Biotin protein ligase C terminal domain YEY1_19460 PF01565 FAD binding domain YEY1_19460 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain YEY1_19500 PF12724 Flavodoxin domain YEY1_19505 PF02386 Cation transport protein YEY1_19510 PF01205 Uncharacterized protein family UPF0029 YEY1_19510 PF09186 Domain of unknown function (DUF1949) YEY1_19515 PF00557 Metallopeptidase family M24 YEY1_19520 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YEY1_19520 PF00378 Enoyl-CoA hydratase/isomerase YEY1_19520 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain YEY1_19525 PF00108 Thiolase, N-terminal domain YEY1_19525 PF02803 Thiolase, C-terminal domain YEY1_19530 PF00175 Oxidoreductase NAD-binding domain YEY1_19530 PF00970 Oxidoreductase FAD-binding domain YEY1_19535 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YEY1_19540 PF02357 Transcription termination factor nusG YEY1_19545 PF00490 Delta-aminolevulinic acid dehydratase YEY1_19550 PF01026 TatD related DNase YEY1_19555 PF00902 Sec-independent protein translocase protein (TatC) YEY1_19565 PF02416 mttA/Hcf106 family YEY1_19570 PF03109 ABC1 family YEY1_19575 PF02036 SCP-2 sterol transfer family YEY1_19580 PF01209 ubiE/COQ5 methyltransferase family YEY1_19585 PF02646 RmuC family YEY1_19590 PF09335 SNARE associated Golgi protein YEY1_19595 PF13722 5TM C-terminal transporter carbon starvation CstA YEY1_19595 PF02554 Carbon starvation protein CstA YEY1_19610 PF01048 Phosphorylase superfamily YEY1_19615 PF01738 Dienelactone hydrolase family YEY1_19620 PF08267 Cobalamin-independent synthase, N-terminal domain YEY1_19620 PF01717 Cobalamin-independent synthase, Catalytic domain YEY1_19625 PF03466 LysR substrate binding domain YEY1_19625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_19630 PF00892 EamA-like transporter family YEY1_19635 PF03547 Membrane transport protein YEY1_19640 PF03009 Glycerophosphoryl diester phosphodiesterase family YEY1_19645 PF17912 MalK OB fold domain YEY1_19645 PF00005 ABC transporter YEY1_19650 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_19655 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_19695 PF00005 ABC transporter YEY1_19700 PF00005 ABC transporter YEY1_19700 PF12399 Branched-chain amino acid ATP-binding cassette transporter YEY1_19705 PF11862 Domain of unknown function (DUF3382) YEY1_19705 PF02653 Branched-chain amino acid transport system / permease component YEY1_19710 PF02653 Branched-chain amino acid transport system / permease component YEY1_19715 PF13458 Periplasmic binding protein YEY1_19720 PF12568 Acetyltransferase (GNAT) domain, PanZ YEY1_19740 PF00140 Sigma-70 factor, region 1.2 YEY1_19740 PF04545 Sigma-70, region 4 YEY1_19740 PF04542 Sigma-70 region 2 YEY1_19745 PF02687 FtsX-like permease family YEY1_19745 PF18075 FtsX extracellular domain YEY1_19750 PF00005 ABC transporter YEY1_19755 PF02881 SRP54-type protein, helical bundle domain YEY1_19755 PF00448 SRP54-type protein, GTPase domain YEY1_19765 PF06611 Protein of unknown function (DUF1145) YEY1_19780 PF07947 YhhN family YEY1_19785 PF00403 Heavy-metal-associated domain YEY1_19790 PF01206 Sulfurtransferase TusA YEY1_19795 PF02592 Putative vitamin uptake transporter YEY1_19800 PF08786 DcrB YEY1_19805 PF02754 Cysteine-rich domain YEY1_19805 PF13183 4Fe-4S dicluster domain YEY1_19810 PF00890 FAD binding domain YEY1_19815 PF04324 BFD-like [2Fe-2S] binding domain YEY1_19815 PF01266 FAD dependent oxidoreductase YEY1_19820 PF07690 Major Facilitator Superfamily YEY1_19825 PF03009 Glycerophosphoryl diester phosphodiesterase family YEY1_19840 PF12146 Serine aminopeptidase, S33 YEY1_19845 PF01810 LysE type translocator YEY1_19850 PF01810 LysE type translocator YEY1_19855 PF09382 RQC domain YEY1_19855 PF16124 RecQ zinc-binding YEY1_19855 PF00570 HRDC domain YEY1_19855 PF00271 Helicase conserved C-terminal domain YEY1_19855 PF00270 DEAD/DEAH box helicase YEY1_19860 PF02253 Phospholipase A1 YEY1_19865 PF03061 Thioesterase superfamily YEY1_19870 PF00892 EamA-like transporter family YEY1_19875 PF01544 CorA-like Mg2+ transporter protein YEY1_19880 PF09370 Phosphoenolpyruvate hydrolase-like YEY1_19895 PF00580 UvrD/REP helicase N-terminal domain YEY1_19895 PF13361 UvrD-like helicase C-terminal domain YEY1_19900 PF13419 Haloacid dehalogenase-like hydrolase YEY1_19905 PF00589 Phage integrase family YEY1_19905 PF02899 Phage integrase, N-terminal SAM-like domain YEY1_19910 PF04340 Protein of unknown function, DUF484 YEY1_19915 PF01678 Diaminopimelate epimerase YEY1_19920 PF13627 Prokaryotic lipoprotein-attachment site YEY1_19925 PF01491 Frataxin-like domain YEY1_19930 PF12633 Adenylate cyclase NT domain YEY1_19930 PF01295 Adenylate cyclase, class-I YEY1_19935 PF03900 Porphobilinogen deaminase, C-terminal domain YEY1_19935 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain YEY1_19940 PF02602 Uroporphyrinogen-III synthase HemD YEY1_19945 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase YEY1_19950 PF07719 Tetratricopeptide repeat YEY1_19950 PF07219 HemY protein N-terminus YEY1_19985 PF00324 Amino acid permease YEY1_19990 PF03808 Glycosyl transferase WecB/TagA/CpsF family YEY1_19995 PF06899 WzyE protein, O-antigen assembly polymerase YEY1_20000 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 YEY1_20005 PF01943 Polysaccharide biosynthesis protein YEY1_20010 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family YEY1_20020 PF00483 Nucleotidyl transferase YEY1_20030 PF16363 GDP-mannose 4,6 dehydratase YEY1_20035 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YEY1_20035 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain YEY1_20035 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain YEY1_20040 PF02350 UDP-N-acetylglucosamine 2-epimerase YEY1_20045 PF02706 Chain length determinant protein YEY1_20050 PF00953 Glycosyl transferase family 4 YEY1_20055 PF07498 Rho termination factor, N-terminal domain YEY1_20055 PF07497 Rho termination factor, RNA-binding domain YEY1_20055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YEY1_20060 PF00085 Thioredoxin YEY1_20065 PF00271 Helicase conserved C-terminal domain YEY1_20065 PF00270 DEAD/DEAH box helicase YEY1_20070 PF02541 Ppx/GppA phosphatase family YEY1_20075 PF00295 Glycosyl hydrolases family 28 YEY1_20080 PF13361 UvrD-like helicase C-terminal domain YEY1_20080 PF00580 UvrD/REP helicase N-terminal domain YEY1_20095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YEY1_20095 PF02753 Pili assembly chaperone PapD, C-terminal domain YEY1_20100 PF13953 PapC C-terminal domain YEY1_20100 PF00577 Outer membrane usher protein YEY1_20100 PF13954 PapC N-terminal domain YEY1_20110 PF02753 Pili assembly chaperone PapD, C-terminal domain YEY1_20110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain YEY1_20120 PF01320 Colicin immunity protein / pyocin immunity protein YEY1_20125 PF01320 Colicin immunity protein / pyocin immunity protein YEY1_20130 PF06958 S-type Pyocin YEY1_20135 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain YEY1_20135 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain YEY1_20140 PF03466 LysR substrate binding domain YEY1_20140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_20160 PF00291 Pyridoxal-phosphate dependent enzyme YEY1_20160 PF00585 C-terminal regulatory domain of Threonine dehydratase YEY1_20165 PF00920 Dehydratase family YEY1_20170 PF01063 Amino-transferase class IV YEY1_20180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YEY1_20180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain YEY1_20180 PF00205 Thiamine pyrophosphate enzyme, central domain YEY1_20185 PF08046 IlvGEDA operon leader peptide YEY1_20190 PF01078 Magnesium chelatase, subunit ChlI YEY1_20190 PF13335 Magnesium chelatase, subunit ChlI C-terminal YEY1_20195 PF04219 Protein of unknown function, DUF YEY1_20200 PF03466 LysR substrate binding domain YEY1_20200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_20205 PF02653 Branched-chain amino acid transport system / permease component YEY1_20210 PF02653 Branched-chain amino acid transport system / permease component YEY1_20215 PF00005 ABC transporter YEY1_20220 PF13407 Periplasmic binding protein domain YEY1_20265 PF01177 Asp/Glu/Hydantoin racemase YEY1_20270 PF00593 TonB dependent receptor YEY1_20270 PF07715 TonB-dependent Receptor Plug Domain YEY1_20275 PF05958 tRNA (Uracil-5-)-methyltransferase YEY1_20280 PF07226 Protein of unknown function (DUF1422) YEY1_20285 PF00440 Bacterial regulatory proteins, tetR family YEY1_20290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YEY1_20290 PF07992 Pyridine nucleotide-disulphide oxidoreductase YEY1_20295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family YEY1_20295 PF03466 LysR substrate binding domain YEY1_20300 PF08534 Redoxin YEY1_20300 PF00462 Glutaredoxin YEY1_20310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YEY1_20310 PF07992 Pyridine nucleotide-disulphide oxidoreductase YEY1_20320 PF00529 HlyD membrane-fusion protein of T1SS YEY1_20325 PF00664 ABC transporter transmembrane region YEY1_20325 PF00005 ABC transporter YEY1_20350 PF07715 TonB-dependent Receptor Plug Domain YEY1_20350 PF00593 TonB dependent receptor YEY1_20355 PF14698 Argininosuccinate lyase C-terminal YEY1_20355 PF00206 Lyase YEY1_20360 PF00696 Amino acid kinase family YEY1_20365 PF02774 Semialdehyde dehydrogenase, dimerisation domain YEY1_20365 PF01118 Semialdehyde dehydrogenase, NAD binding domain YEY1_20370 PF07687 Peptidase dimerisation domain YEY1_20370 PF01546 Peptidase family M20/M25/M40 YEY1_20375 PF00311 Phosphoenolpyruvate carboxylase YEY1_20380 PF02219 Methylenetetrahydrofolate reductase YEY1_20385 PF00696 Amino acid kinase family YEY1_20385 PF03447 Homoserine dehydrogenase, NAD binding domain YEY1_20385 PF00742 Homoserine dehydrogenase YEY1_20390 PF01053 Cys/Met metabolism PLP-dependent enzyme YEY1_20395 PF01340 Met Apo-repressor, MetJ YEY1_20400 PF01197 Ribosomal protein L31 YEY1_20405 PF00271 Helicase conserved C-terminal domain YEY1_20405 PF00270 DEAD/DEAH box helicase YEY1_20405 PF18319 PriA DNA helicase Cys-rich region (CRR) domain YEY1_20405 PF18074 Primosomal protein N C-terminal domain YEY1_20405 PF17764 3′ DNA-binding domain (3′BD) YEY1_20410 PF00356 Bacterial regulatory proteins, lacI family YEY1_20415 PF05036 Sporulation related domain YEY1_20420 PF00227 Proteasome subunit YEY1_20425 PF00004 ATPase family associated with various cellular activities (AAA) YEY1_20425 PF07724 AAA domain (Cdc48 subfamily) YEY1_20425 PF10431 C-terminal, D2-small domain, of ClpB protein YEY1_20430 PF01040 UbiA prenyltransferase family YEY1_20435 PF03737 Aldolase/RraA YEY1_20440 PF06005 Cell division protein ZapB YEY1_20450 PF00230 Major intrinsic protein YEY1_20455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain YEY1_20455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain YEY1_20460 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded YEY1_20470 PF07690 Major Facilitator Superfamily YEY1_20485 PF00970 Oxidoreductase FAD-binding domain YEY1_20485 PF00175 Oxidoreductase NAD-binding domain YEY1_20490 PF05656 Protein of unknown function (DUF805) YEY1_20495 PF07305 Protein of unknown function (DUF1454) YEY1_20500 PF00121 Triosephosphate isomerase YEY1_20515 PF00365 Phosphofructokinase YEY1_20520 PF01545 Cation efflux family YEY1_20520 PF16916 Dimerisation domain of Zinc Transporter YEY1_20525 PF04606 Ogr/Delta-like zinc finger YEY1_20590 PF00665 Integrase core domain YEY1_20595 PF01695 IstB-like ATP binding protein YEY1_20620 PF02810 SEC-C motif YEY1_20620 PF01043 SecA preprotein cross-linking domain YEY1_20620 PF07516 SecA Wing and Scaffold domain YEY1_20620 PF00271 Helicase conserved C-terminal domain YEY1_20620 PF07517 SecA DEAD-like domain YEY1_20625 PF05840 Bacteriophage replication gene A protein (GPA) YEY1_20645 PF00589 Phage integrase family YEY1_20645 PF02899 Phage integrase, N-terminal SAM-like domain YEY1_20650 PF07813 LTXXQ motif family protein YEY1_20655 PF00072 Response regulator receiver domain YEY1_20655 PF00486 Transcriptional regulatory protein, C terminal YEY1_20660 PF00672 HAMP domain YEY1_20660 PF00512 His Kinase A (phospho-acceptor) domain YEY1_20660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_20660 PF16527 Two-component sensor protein CpxA, periplasmic domain YEY1_20665 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain YEY1_20665 PF12833 Helix-turn-helix domain YEY1_20665 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain YEY1_20665 PF02805 Metal binding domain of Ada YEY1_20670 PF00588 SpoU rRNA Methylase family YEY1_20675 PF06426 Serine acetyltransferase, N-terminal YEY1_20675 PF00132 Bacterial transferase hexapeptide (six repeats) YEY1_20680 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YEY1_20680 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus YEY1_20685 PF02556 Preprotein translocase subunit SecB YEY1_20690 PF00462 Glutaredoxin YEY1_20695 PF00581 Rhodanese-like domain YEY1_20700 PF01676 Metalloenzyme superfamily YEY1_20700 PF06415 BPG-independent PGAM N-terminus (iPGM_N) YEY1_20705 PF01551 Peptidase family M23 YEY1_20710 PF04748 Divergent polysaccharide deacetylase YEY1_20725 PF00107 Zinc-binding dehydrogenase YEY1_20725 PF08240 Alcohol dehydrogenase GroES-like domain YEY1_20730 PF00155 Aminotransferase class I and II YEY1_20735 PF01370 NAD dependent epimerase/dehydratase family YEY1_20740 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YEY1_20745 PF01075 Glycosyltransferase family 9 (heptosyltransferase) YEY1_20750 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YEY1_20755 PF00535 Glycosyl transferase family 2 YEY1_20760 PF01467 Cytidylyltransferase-like YEY1_20765 PF06827 Zinc finger found in FPG and IleRS YEY1_20765 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain YEY1_20765 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain YEY1_20770 PF00471 Ribosomal protein L33 YEY1_20775 PF00830 Ribosomal L28 family YEY1_20785 PF04002 RadC-like JAB domain YEY1_20790 PF02441 Flavoprotein YEY1_20790 PF04127 DNA / pantothenate metabolism flavoprotein YEY1_20795 PF00692 dUTPase YEY1_20800 PF00440 Bacterial regulatory proteins, tetR family YEY1_20810 PF00156 Phosphoribosyl transferase domain YEY1_20815 PF03725 3' exoribonuclease family, domain 2 YEY1_20815 PF01138 3' exoribonuclease family, domain 1 YEY1_20820 PF03755 YicC-like family, N-terminal region YEY1_20820 PF08340 Domain of unknown function (DUF1732) YEY1_20835 PF00990 Diguanylate cyclase, GGDEF domain YEY1_20835 PF00563 EAL domain YEY1_20835 PF13426 PAS domain YEY1_20840 PF00378 Enoyl-CoA hydratase/isomerase YEY1_20845 PF07662 Na+ dependent nucleoside transporter C-terminus YEY1_20845 PF01773 Na+ dependent nucleoside transporter N-terminus YEY1_20845 PF07670 Nucleoside recognition YEY1_20855 PF03458 UPF0126 domain YEY1_20860 PF03120 NAD-dependent DNA ligase OB-fold domain YEY1_20860 PF01653 NAD-dependent DNA ligase adenylation domain YEY1_20865 PF00625 Guanylate kinase YEY1_20870 PF01192 RNA polymerase Rpb6 YEY1_20875 PF02824 TGS domain YEY1_20875 PF13291 ACT domain YEY1_20875 PF04607 Region found in RelA / SpoT proteins YEY1_20880 PF00588 SpoU rRNA Methylase family YEY1_20880 PF12105 SpoU, rRNA methylase, C-terminal YEY1_20885 PF17191 RecG wedge domain YEY1_20885 PF00271 Helicase conserved C-terminal domain YEY1_20885 PF00270 DEAD/DEAH box helicase YEY1_20900 PF03616 Sodium/glutamate symporter YEY1_20905 PF00860 Permease family YEY1_20910 PF05170 AsmA family YEY1_20930 PF13693 Winged helix-turn-helix DNA-binding YEY1_20935 PF00583 Acetyltransferase (GNAT) family YEY1_20935 PF09500 Putative thioesterase (yiiD_Cterm) YEY1_20945 PF02580 D-Tyr-tRNA(Tyr) deacylase YEY1_20950 PF03631 Virulence factor BrkB YEY1_20955 PF13419 Haloacid dehalogenase-like hydrolase YEY1_20970 PF00120 Glutamine synthetase, catalytic domain YEY1_20970 PF03951 Glutamine synthetase, beta-Grasp domain YEY1_20980 PF00989 PAS fold YEY1_20980 PF00512 His Kinase A (phospho-acceptor) domain YEY1_20980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_20985 PF00158 Sigma-54 interaction domain YEY1_20985 PF02954 Bacterial regulatory protein, Fis family YEY1_20985 PF00072 Response regulator receiver domain YEY1_20995 PF04055 Radical SAM superfamily YEY1_20995 PF06969 HemN C-terminal domain YEY1_21005 PF04220 Der GTPase activator (YihI) YEY1_21010 PF01926 50S ribosome-binding GTPase YEY1_21015 PF01612 3'-5' exonuclease YEY1_21015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain YEY1_21015 PF01367 5'-3' exonuclease, C-terminal SAM fold YEY1_21015 PF00476 DNA polymerase family A YEY1_21020 PF01323 DSBA-like thioredoxin domain YEY1_21025 PF01636 Phosphotransferase enzyme family YEY1_21030 PF06288 Protein of unknown function (DUF1040) YEY1_21035 PF12804 MobA-like NTP transferase domain YEY1_21040 PF03205 Molybdopterin guanine dinucleotide synthesis protein B YEY1_21075 PF07729 FCD domain YEY1_21075 PF00392 Bacterial regulatory proteins, gntR family YEY1_21080 PF07690 Major Facilitator Superfamily YEY1_21085 PF00356 Bacterial regulatory proteins, lacI family YEY1_21090 PF00294 pfkB family carbohydrate kinase YEY1_21095 PF13407 Periplasmic binding protein domain YEY1_21100 PF02653 Branched-chain amino acid transport system / permease component YEY1_21105 PF00005 ABC transporter YEY1_21110 PF05025 RbsD / FucU transport protein family YEY1_21115 PF02705 K+ potassium transporter YEY1_21120 PF17868 AAA lid domain YEY1_21120 PF12592 Protein of unknown function (DUF3763) YEY1_21120 PF07728 AAA domain (dynein-related subfamily) YEY1_21125 PF05762 VWA domain containing CoxE-like protein YEY1_21135 PF03590 Aspartate-ammonia ligase YEY1_21140 PF01037 Lrp/AsnC ligand binding domain YEY1_21145 PF00258 Flavodoxin YEY1_21150 PF01134 Glucose inhibited division protein A YEY1_21150 PF13932 GidA associated domain YEY1_21155 PF02527 rRNA small subunit methyltransferase G YEY1_21160 PF03899 ATP synthase I chain YEY1_21165 PF00119 ATP synthase A chain YEY1_21170 PF00137 ATP synthase subunit C YEY1_21175 PF00430 ATP synthase B/B' CF(0) YEY1_21180 PF00213 ATP synthase delta (OSCP) subunit YEY1_21185 PF00306 ATP synthase alpha/beta chain, C terminal domain YEY1_21185 PF02874 ATP synthase alpha/beta family, beta-barrel domain YEY1_21185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YEY1_21190 PF00231 ATP synthase YEY1_21195 PF02874 ATP synthase alpha/beta family, beta-barrel domain YEY1_21195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YEY1_21200 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain YEY1_21200 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain YEY1_21205 PF12804 MobA-like NTP transferase domain YEY1_21205 PF00132 Bacterial transferase hexapeptide (six repeats) YEY1_21210 PF01380 SIS domain YEY1_21215 PF12849 PBP superfamily domain YEY1_21220 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_21225 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_21230 PF00005 ABC transporter YEY1_21235 PF01895 PhoU domain YEY1_21245 PF00497 Bacterial extracellular solute-binding proteins, family 3 YEY1_21250 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_21255 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_21260 PF13419 Haloacid dehalogenase-like hydrolase YEY1_21265 PF00860 Permease family YEY1_21275 PF00196 Bacterial regulatory proteins, luxR family YEY1_21275 PF00072 Response regulator receiver domain YEY1_21280 PF00512 His Kinase A (phospho-acceptor) domain YEY1_21280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YEY1_21285 PF03358 NADPH-dependent FMN reductase YEY1_21290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain YEY1_21290 PF02203 Tar ligand binding domain homologue YEY1_21290 PF00672 HAMP domain YEY1_21295 PF00528 Binding-protein-dependent transport system inner membrane component YEY1_21300 PF09383 NIL domain YEY1_21300 PF00005 ABC transporter YEY1_21310 PF12241 Trans-2-enoyl-CoA reductase catalytic region YEY1_21310 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase YEY1_21310 PF07055 Enoyl reductase FAD binding domain YEY1_21315 PF10396 GTP-binding protein TrmE N-terminus YEY1_21315 PF12631 MnmE helical domain YEY1_21315 PF01926 50S ribosome-binding GTPase YEY1_21320 PF02096 60Kd inner membrane protein YEY1_21320 PF14849 YidC periplasmic domain YEY1_21325 PF01809 Putative membrane protein insertion efficiency factor YEY1_21330 PF00825 Ribonuclease P YEY1_21335 PF00468 Ribosomal protein L34 YEY1_21350 PF13614 AAA domain YEY1_21365 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH YEY1_21375 PF09020 YopE, N terminal YEY1_21375 PF03545 Yersinia virulence determinant (YopE) YEY1_21380 PF05932 Tir chaperone protein (CesT) family YEY1_21395 PF09013 YopH, N-terminal YEY1_21395 PF00102 Protein-tyrosine phosphatase YEY1_21405 PF09013 YopH, N-terminal YEY1_21410 PF02108 Flagellar assembly protein FliH YEY1_21415 PF06578 YOP proteins translocation protein K (YscK) YEY1_21420 PF01514 Secretory protein of YscJ/FliF family YEY1_21425 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI YEY1_21430 PF09025 YopR, type III needle-polymerisation regulator YEY1_21435 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) YEY1_21440 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF YEY1_21445 PF08988 Type III secretion system, cytoplasmic E component of needle YEY1_21450 PF16693 Inner membrane component of T3SS, periplasmic domain YEY1_21450 PF16697 Inner membrane component of T3SS, cytoplasmic domain YEY1_21460 PF05932 Tir chaperone protein (CesT) family YEY1_21465 PF17551 Family of unknown function (DUF5463) YEY1_21470 PF12833 Helix-turn-helix domain YEY1_21480 PF01312 FlhB HrpN YscU SpaS Family YEY1_21485 PF01311 Bacterial export proteins, family 1 YEY1_21490 PF01313 Bacterial export proteins, family 3 YEY1_21495 PF00813 FliP family YEY1_21500 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term YEY1_21505 PF02120 Flagellar hook-length control protein FliK YEY1_21510 PF07321 Type III secretion protein YscO YEY1_21515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain YEY1_21515 PF02874 ATP synthase alpha/beta family, beta-barrel domain YEY1_21515 PF18269 T3SS EscN ATPase C-terminal domain YEY1_21520 PF07201 HrpJ-like domain YEY1_21525 PF09059 TyeA YEY1_21535 PF09474 Type III secretion system YscX (type_III_YscX) YEY1_21545 PF00771 FHIPEP family YEY1_21550 PF09621 Type III secretion system regulator (LcrR) YEY1_21555 PF07216 LcrG protein YEY1_21560 PF04792 V antigen (LcrV) protein YEY1_21565 PF07720 Tetratricopeptide repeat YEY1_21570 PF04888 Secretion system effector C (SseC) like family YEY1_21575 PF05844 YopD protein YEY1_21585 PF12468 Type III secretion system leucine rich repeat protein YEY1_21585 PF12468 Type III secretion system leucine rich repeat protein YEY1_21615 PF05932 Tir chaperone protein (CesT) family YEY1_21620 PF03543 Yersinia/Haemophilus virulence surface antigen YEY1_21635 PF05818 Enterobacterial TraT complement resistance protein YEY1_21650 PF09632 Rac1-binding domain YEY1_21650 PF00069 Protein kinase domain YEY1_21665 PF00665 Integrase core domain YEY1_21670 PF01695 IstB-like ATP binding protein YEY1_21680 PF02387 IncFII RepA protein family YEY1_21690 PF10723 Replication regulatory protein RepB YEY1_21705 PF05857 TraX protein YEY1_21725 PF09013 YopH, N-terminal YEY1_21745 PF03895 YadA-like membrane anchor domain YEY1_21745 PF05658 Head domain of trimeric autotransporter adhesin YEY1_21745 PF05662 Coiled stalk of trimeric autotransporter adhesin YEY1_21750 PF00892 EamA-like transporter family YEY1_21765 PF01526 Tn3 transposase DDE domain YEY1_21765 PF13700 Domain of unknown function (DUF4158) YEY1_21765 PF01526 Tn3 transposase DDE domain YEY1_21765 PF13700 Domain of unknown function (DUF4158) YEY1_21770 PF00239 Resolvase, N terminal domain YEY1_21770 PF02796 Helix-turn-helix domain of resolvase YEY1_21775 PF03960 ArsC family YEY1_21780 PF02040 Arsenical pump membrane protein YEY1_21785 PF01022 Bacterial regulatory protein, arsR family YEY1_21790 PF03358 NADPH-dependent FMN reductase