Y11_00001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_00011	SSF52833	Thioredoxin-like
Y11_00021	SSF48452	TPR-like
Y11_00051	SSF52833	Thioredoxin-like
Y11_00061	SSF55021	ACT-like
Y11_00071	SSF51569	Aldolase
Y11_00091	SSF56104	SAICAR synthase-like
Y11_00121	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_00121	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_00151	SSF53474	alpha/beta-Hydrolases
Y11_00221	SSF56925	OMPA-like
Y11_00261	SSF55166	Hedgehog/DD-peptidase
Y11_00271	SSF53187	Zn-dependent exopeptidases
Y11_00271	SSF55031	Bacterial exopeptidase dimerisation domain
Y11_00281	SSF52833	Thioredoxin-like
Y11_00301	SSF48452	TPR-like
Y11_00321	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Y11_00321	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Y11_00321	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Y11_00341	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_00341	SSF52172	CheY-like
Y11_00351	SSF54862	4Fe-4S ferredoxins
Y11_00371	SSF50692	ADC-like
Y11_00371	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Y11_00381	SSF48695	Multiheme cytochromes
Y11_00391	SSF48695	Multiheme cytochromes
Y11_00401	SSF55811	Nudix
Y11_00411	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_00411	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Y11_00411	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Y11_00441	SSF46785	"Winged helix" DNA-binding domain
Y11_00461	SSF102886	Coproporphyrinogen III oxidase
Y11_00471	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_00481	SSF101756	Hypothetical protein YgiW
Y11_00501	SSF54909	Dimeric alpha+beta barrel
Y11_00531	SSF51569	Aldolase
Y11_00541	SSF51366	Ribulose-phoshate binding barrel
Y11_00561	SSF53067	Actin-like ATPase domain
Y11_00571	SSF51197	Clavaminate synthase-like
Y11_00581	SSF46689	Homeodomain-like
Y11_00581	SSF53697	SIS domain
Y11_00601	SSF103473	MFS general substrate transporter
Y11_00611	SSF53850	Periplasmic binding protein-like II
Y11_00621	SSF161098	MetI-like
Y11_00631	SSF161098	MetI-like
Y11_00641	SSF50331	MOP-like
Y11_00641	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_00651	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_00671	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_00681	SSF111369	HlyD-like secretion proteins
Y11_00691	SSF52172	CheY-like
Y11_00701	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_00701	SSF52172	CheY-like
Y11_00711	SSF158472	HAMP domain-like
Y11_00711	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_00711	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_00721	SSF51261	Duplicated hybrid motif
Y11_00731	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Y11_00731	SSF51621	Phosphoenolpyruvate/pyruvate domain
Y11_00731	SSF52009	Phosphohistidine domain
Y11_00741	SSF55594	HPr-like
Y11_00751	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_00771	SSF64383	Cell-division protein ZipA, C-terminal domain
Y11_00781	SSF47781	RuvA domain 2-like
Y11_00781	SSF50249	Nucleic acid-binding proteins
Y11_00781	SSF52113	BRCT domain
Y11_00781	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Y11_00831	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
Y11_00831	SSF52374	Nucleotidylyl transferase
Y11_00871	SSF51430	NAD(P)-linked oxidoreductase
Y11_00891	SSF52467	DHS-like NAD/FAD-binding domain
Y11_00891	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_00901	SSF46785	"Winged helix" DNA-binding domain
Y11_00901	SSF53850	Periplasmic binding protein-like II
Y11_00921	SSF53067	Actin-like ATPase domain
Y11_00941	SSF103473	MFS general substrate transporter
Y11_00951	SSF52172	CheY-like
Y11_00961	SSF55781	GAF domain-like
Y11_00961	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_00971	SSF51197	Clavaminate synthase-like
Y11_00981	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_00991	SSF53383	PLP-dependent transferases
Y11_01001	SSF81342	Transmembrane di-heme cytochromes
Y11_01051	SSF50331	MOP-like
Y11_01051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_01061	SSF161098	MetI-like
Y11_01071	SSF53850	Periplasmic binding protein-like II
Y11_01081	SSF53955	Lysozyme-like
Y11_01101	SSF51338	Composite domain of metallo-dependent hydrolases
Y11_01101	SSF51556	Metallo-dependent hydrolases
Y11_01111	SSF46689	Homeodomain-like
Y11_01111	SSF48498	Tetracyclin repressor-like, C-terminal domain
Y11_01121	SSF103473	MFS general substrate transporter
Y11_01141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_01161	SSF159594	XCC0632-like
Y11_01181	SSF53474	alpha/beta-Hydrolases
Y11_01191	SSF81342	Transmembrane di-heme cytochromes
Y11_01201	SSF101874	YceI-like
Y11_01211	SSF101874	YceI-like
Y11_01221	SSF47413	lambda repressor-like DNA-binding domains
Y11_01221	SSF53822	Periplasmic binding protein-like I
Y11_01231	SSF55604	Glucose permease domain IIB
Y11_01241	SSF51445	(Trans)glycosidases
Y11_01261	SSF46785	"Winged helix" DNA-binding domain
Y11_01271	SSF57783	Zinc beta-ribbon
Y11_01271	SSF82057	Prokaryotic SH3-related domain
Y11_01301	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_01351	SSF82093	Heme chaperone CcmE
Y11_01371	SSF52833	Thioredoxin-like
Y11_01391	SSF48452	TPR-like
Y11_01411	SSF56935	Porins
Y11_01431	SSF53901	Thiolase-like
Y11_01441	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_01441	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_01441	SSF52096	ClpP/crotonase
Y11_01451	SSF53254	Phosphoglycerate mutase-like
Y11_01461	SSF160443	SMR domain-like
Y11_01471	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_01481	SSF103263	Chorismate synthase, AroC
Y11_01491	SSF55166	Hedgehog/DD-peptidase
Y11_01531	SSF51905	FAD/NAD(P)-binding domain
Y11_01531	SSF54373	FAD-linked reductases, C-terminal domain
Y11_01541	SSF53901	Thiolase-like
Y11_01551	SSF55073	Nucleotide cyclase
Y11_01551	SSF55785	PYP-like sensor domain (PAS domain)
Y11_01561	SSF55073	Nucleotide cyclase
Y11_01571	SSF53681	Aspartate/glutamate racemase
Y11_01581	SSF56935	Porins
Y11_01591	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
Y11_01601	SSF51445	(Trans)glycosidases
Y11_01621	SSF52794	PTS system IIB component-like
Y11_01631	SSF47413	lambda repressor-like DNA-binding domains
Y11_01631	SSF53822	Periplasmic binding protein-like I
Y11_01641	SSF53254	Phosphoglycerate mutase-like
Y11_01691	SSF52833	Thioredoxin-like
Y11_01701	SSF52833	Thioredoxin-like
Y11_01711	SSF52833	Thioredoxin-like
Y11_01721	SSF46785	"Winged helix" DNA-binding domain
Y11_01721	SSF53383	PLP-dependent transferases
Y11_01731	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_01741	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_01751	SSF46689	Homeodomain-like
Y11_01751	SSF51182	RmlC-like cupins
Y11_01761	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_01761	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Y11_01771	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_01771	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_01781	SSF55120	Pseudouridine synthase
Y11_01801	SSF52096	ClpP/crotonase
Y11_01821	SSF53244	MurD-like peptide ligases, peptide-binding domain
Y11_01821	SSF53623	MurD-like peptide ligases, catalytic domain
Y11_01831	SSF110997	Sporulation related repeat
Y11_01851	SSF53271	PRTase-like
Y11_01851	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Y11_01861	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Y11_01871	SSF53850	Periplasmic binding protein-like II
Y11_01881	SSF161098	MetI-like
Y11_01891	SSF161098	MetI-like
Y11_01901	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_01911	SSF51120	beta-Roll
Y11_01921	SSF51120	beta-Roll
Y11_01931	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_01941	SSF141868	EAL domain-like
Y11_01951	SSF56300	Metallo-dependent phosphatases
Y11_01961	SSF55811	Nudix
Y11_02001	SSF52794	PTS system IIB component-like
Y11_02011	SSF55804	Phoshotransferase/anion transport protein
Y11_02021	SSF47413	lambda repressor-like DNA-binding domains
Y11_02021	SSF53822	Periplasmic binding protein-like I
Y11_02031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_02031	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Y11_02031	SSF75138	HprK N-terminal domain-like
Y11_02051	SSF53067	Actin-like ATPase domain
Y11_02071	SSF116960	YfbU-like
Y11_02081	SSF56784	HAD-like
Y11_02111	SSF116726	TrkA C-terminal domain-like
Y11_02121	SSF109604	HD-domain/PDEase-like
Y11_02131	SSF53383	PLP-dependent transferases
Y11_02141	SSF46785	"Winged helix" DNA-binding domain
Y11_02141	SSF53850	Periplasmic binding protein-like II
Y11_02161	SSF56770	HydA/Nqo6-like
Y11_02171	SSF143243	Nqo5-like
Y11_02171	SSF56762	HydB/Nqo4-like
Y11_02181	SSF52833	Thioredoxin-like
Y11_02191	SSF140490	Nqo1C-terminal domain-like
Y11_02191	SSF142019	Nqo1 FMN-binding domain-like
Y11_02191	SSF142984	Nqo1 middle domain-like
Y11_02201	SSF50692	ADC-like
Y11_02201	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Y11_02201	SSF54862	4Fe-4S ferredoxins
Y11_02221	SSF54862	4Fe-4S ferredoxins
Y11_02311	SSF51197	Clavaminate synthase-like
Y11_02321	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_02331	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_02351	SSF47413	lambda repressor-like DNA-binding domains
Y11_02351	SSF53822	Periplasmic binding protein-like I
Y11_02361	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Y11_02371	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_02381	SSF103473	MFS general substrate transporter
Y11_02391	SSF143744	GlcG-like
Y11_02401	SSF143975	IlvD/EDD N-terminal domain-like
Y11_02401	SSF52016	LeuD/IlvD-like
Y11_02421	SSF56322	ADC synthase
Y11_02441	SSF52467	DHS-like NAD/FAD-binding domain
Y11_02441	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_02451	SSF53474	alpha/beta-Hydrolases
Y11_02461	SSF52096	ClpP/crotonase
Y11_02471	SSF51604	Enolase C-terminal domain-like
Y11_02471	SSF54826	Enolase N-terminal domain-like
Y11_02481	SSF56801	Acetyl-CoA synthetase-like
Y11_02501	SSF56634	Heme-dependent catalase-like
Y11_02511	SSF56925	OMPA-like
Y11_02531	SSF142433	CinA-like
Y11_02531	SSF53218	Molybdenum cofactor biosynthesis proteins
Y11_02571	SSF51120	beta-Roll
Y11_02571	SSF52743	Subtilisin-like
Y11_02581	SSF49785	Galactose-binding domain-like
Y11_02581	SSF51120	beta-Roll
Y11_02591	SSF49772	Ecotin, trypsin inhibitor
Y11_02601	SSF54292	2Fe-2S ferredoxin-like
Y11_02611	SSF47240	Ferritin-like
Y11_02621	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
Y11_02621	SSF51998	PFL-like glycyl radical enzymes
Y11_02631	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_02641	SSF101904	GyrA/ParC C-terminal domain-like
Y11_02641	SSF56719	Type II DNA topoisomerase
Y11_02651	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_02651	SSF52172	CheY-like
Y11_02651	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_02661	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_02661	SSF52172	CheY-like
Y11_02671	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Y11_02671	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_02671	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_02681	SSF103473	MFS general substrate transporter
Y11_02701	SSF111369	HlyD-like secretion proteins
Y11_02741	SSF56935	Porins
Y11_02761	SSF56601	beta-lactamase/transpeptidase-like
Y11_02771	SSF103473	MFS general substrate transporter
Y11_02781	SSF56281	Metallo-hydrolase/oxidoreductase
Y11_02801	SSF103190	Sensory domain-like
Y11_02801	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_02811	SSF69917	OMPT-like
Y11_02821	SSF54857	DNA damage-inducible protein DinI
Y11_02831	SSF47413	lambda repressor-like DNA-binding domains
Y11_02831	SSF51306	LexA/Signal peptidase
Y11_02871	SSF46689	Homeodomain-like
Y11_02871	SSF53697	SIS domain
Y11_02891	SSF55604	Glucose permease domain IIB
Y11_02901	SSF51445	(Trans)glycosidases
Y11_02911	SSF51069	Carbonic anhydrase
Y11_02951	SSF53649	Alkaline phosphatase-like
Y11_02961	SSF158651	YejL-like
Y11_02981	SSF50715	Ribosomal protein L25-like
Y11_02991	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_02991	SSF57829	Zn-binding ribosomal proteins
Y11_03001	SSF55120	Pseudouridine synthase
Y11_03001	SSF55174	Alpha-L RNA-binding motif
Y11_03011	SSF103473	MFS general substrate transporter
Y11_03031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03041	SSF161098	MetI-like
Y11_03051	SSF161098	MetI-like
Y11_03061	SSF53850	Periplasmic binding protein-like II
Y11_03071	SSF141868	EAL domain-like
Y11_03081	SSF54001	Cysteine proteinases
Y11_03091	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Y11_03101	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03121	SSF46785	"Winged helix" DNA-binding domain
Y11_03121	SSF48008	GntR ligand-binding domain-like
Y11_03131	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_03131	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_03151	SSF51658	Xylose isomerase-like
Y11_03161	SSF50104	Translation proteins SH3-like domain
Y11_03161	SSF50249	Nucleic acid-binding proteins
Y11_03201	SSF50692	ADC-like
Y11_03201	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Y11_03211	SSF48695	Multiheme cytochromes
Y11_03231	SSF55811	Nudix
Y11_03241	SSF55594	HPr-like
Y11_03241	SSF55804	Phoshotransferase/anion transport protein
Y11_03251	SSF53613	Ribokinase-like
Y11_03261	SSF52794	PTS system IIB component-like
Y11_03281	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_03311	SSF49354	PapD-like
Y11_03321	SSF49584	Periplasmic chaperone C-domain
Y11_03331	SSF141729	FimD N-terminal domain-like
Y11_03341	SSF51658	Xylose isomerase-like
Y11_03361	SSF54001	Cysteine proteinases
Y11_03381	SSF46785	"Winged helix" DNA-binding domain
Y11_03381	SSF53850	Periplasmic binding protein-like II
Y11_03401	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Y11_03411	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03421	SSF56935	Porins
Y11_03431	SSF47616	GST C-terminal domain-like
Y11_03431	SSF52833	Thioredoxin-like
Y11_03441	SSF56784	HAD-like
Y11_03461	SSF51197	Clavaminate synthase-like
Y11_03471	SSF53850	Periplasmic binding protein-like II
Y11_03481	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03481	SSF55021	ACT-like
Y11_03491	SSF161098	MetI-like
Y11_03501	SSF53383	PLP-dependent transferases
Y11_03511	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_03511	SSF54631	CBS-domain pair
Y11_03521	SSF56601	beta-lactamase/transpeptidase-like
Y11_03521	SSF69189	Penicillin-binding protein associated domain
Y11_03541	SSF143548	Serine metabolism enzymes domain
Y11_03561	SSF100950	NagB/RpiA/CoA transferase-like
Y11_03571	SSF51569	Aldolase
Y11_03581	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Y11_03591	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Y11_03601	SSF116726	TrkA C-terminal domain-like
Y11_03611	SSF52833	Thioredoxin-like
Y11_03641	SSF53850	Periplasmic binding protein-like II
Y11_03661	SSF50331	MOP-like
Y11_03661	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03671	SSF161098	MetI-like
Y11_03681	SSF161098	MetI-like
Y11_03711	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_03721	SSF53850	Periplasmic binding protein-like II
Y11_03741	SSF161098	MetI-like
Y11_03751	SSF161098	MetI-like
Y11_03761	SSF53850	Periplasmic binding protein-like II
Y11_03771	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03791	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_03801	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_03811	SSF53383	PLP-dependent transferases
Y11_03821	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_03831	SSF52467	DHS-like NAD/FAD-binding domain
Y11_03831	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_03841	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Y11_03841	SSF54292	2Fe-2S ferredoxin-like
Y11_03841	SSF63380	Riboflavin synthase domain-like
Y11_03851	SSF56821	Prismane protein-like
Y11_03871	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03891	SSF111369	HlyD-like secretion proteins
Y11_03901	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03911	SSF50249	Nucleic acid-binding proteins
Y11_03921	SSF54736	ClpS-like
Y11_03931	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03931	SSF81923	Double Clp-N motif
Y11_03941	SSF50249	Nucleic acid-binding proteins
Y11_03951	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_03961	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03961	SSF90123	ABC transporter transmembrane region
Y11_03971	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_03971	SSF90123	ABC transporter transmembrane region
Y11_03981	SSF51905	FAD/NAD(P)-binding domain
Y11_03991	SSF46785	"Winged helix" DNA-binding domain
Y11_03991	SSF54909	Dimeric alpha+beta barrel
Y11_04001	SSF46785	"Winged helix" DNA-binding domain
Y11_04001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_04011	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Y11_04021	SSF48019	post-AAA+ oligomerization domain-like
Y11_04021	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_04031	SSF46589	tRNA-binding arm
Y11_04031	SSF55681	Class II aaRS and biotin synthetases
Y11_04061	SSF103473	MFS general substrate transporter
Y11_04071	SSF102114	Radical SAM enzymes
Y11_04081	SSF51998	PFL-like glycyl radical enzymes
Y11_04151	SSF53774	Glutaminase/Asparaginase
Y11_04161	SSF53774	Glutaminase/Asparaginase
Y11_04181	SSF53383	PLP-dependent transferases
Y11_04191	SSF55205	EPT/RTPC-like
Y11_04201	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_04211	SSF50249	Nucleic acid-binding proteins
Y11_04221	SSF47729	IHF-like DNA-binding proteins
Y11_04231	SSF56281	Metallo-hydrolase/oxidoreductase
Y11_04241	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_04241	SSF90123	ABC transporter transmembrane region
Y11_04251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_04271	SSF50249	Nucleic acid-binding proteins
Y11_04291	SSF50249	Nucleic acid-binding proteins
Y11_04301	SSF158997	Trm112p-like
Y11_04311	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_04321	SSF56112	Protein kinase-like (PK-like)
Y11_04351	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_04361	SSF140570	MukF C-terminal domain-like
Y11_04361	SSF46785	"Winged helix" DNA-binding domain
Y11_04381	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_04391	SSF141523	L,D-transpeptidase catalytic domain-like
Y11_04391	SSF47090	PGBD-like
Y11_04401	SSF55166	Hedgehog/DD-peptidase
Y11_04411	SSF56281	Metallo-hydrolase/oxidoreductase
Y11_04421	SSF141868	EAL domain-like
Y11_04431	SSF53383	PLP-dependent transferases
Y11_04441	SSF56935	Porins
Y11_04451	SSF50249	Nucleic acid-binding proteins
Y11_04451	SSF55681	Class II aaRS and biotin synthetases
Y11_04461	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Y11_04461	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Y11_04471	SSF55486	Metalloproteases ("zincins"), catalytic domain
Y11_04471	SSF63737	Leukotriene A4 hydrolase N-terminal domain
Y11_04481	SSF51395	FMN-linked oxidoreductases
Y11_04511	SSF141673	MOSC N-terminal domain-like
Y11_04511	SSF50800	PK beta-barrel domain-like
Y11_04511	SSF54292	2Fe-2S ferredoxin-like
Y11_04521	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_04531	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_04561	SSF159594	XCC0632-like
Y11_04581	SSF53901	Thiolase-like
Y11_04591	SSF46785	"Winged helix" DNA-binding domain
Y11_04601	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Y11_04611	SSF54211	Ribosomal protein S5 domain 2-like
Y11_04631	SSF103088	OmpA-like
Y11_04631	SSF56925	OMPA-like
Y11_04641	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_04651	SSF159894	YgaC/TfoX-N like
Y11_04691	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_04701	SSF52335	Methylglyoxal synthase-like
Y11_04721	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_04731	SSF141255	YccV-like
Y11_04741	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_04741	SSF88697	PUA domain-like
Y11_04771	SSF54975	Acylphosphatase/BLUF domain-like
Y11_04781	SSF69721	DsrC, the gamma subunit of dissimilatory sulfite reductase
Y11_04801	SSF48695	Multiheme cytochromes
Y11_04811	SSF48695	Multiheme cytochromes
Y11_04821	SSF54862	4Fe-4S ferredoxins
Y11_04851	SSF52833	Thioredoxin-like
Y11_04871	SSF48452	TPR-like
Y11_04881	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_04881	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors
Y11_04891	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_04901	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_04911	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_04921	SSF116726	TrkA C-terminal domain-like
Y11_04921	SSF56176	FAD-binding/transporter-associated domain-like
Y11_04961	SSF74650	Galactose mutarotase-like
Y11_04961	SSF81296	E set domains
Y11_04971	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_04991	SSF103473	MFS general substrate transporter
Y11_05001	SSF103473	MFS general substrate transporter
Y11_05051	SSF52172	CheY-like
Y11_05061	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_05061	SSF53850	Periplasmic binding protein-like II
Y11_05061	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_05071	SSF54862	4Fe-4S ferredoxins
Y11_05091	SSF50692	ADC-like
Y11_05091	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Y11_05111	SSF52821	Rhodanese/Cell cycle control phosphatase
Y11_05141	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_05151	SSF51905	FAD/NAD(P)-binding domain
Y11_05151	SSF54373	FAD-linked reductases, C-terminal domain
Y11_05171	SSF54857	DNA damage-inducible protein DinI
Y11_05181	SSF51556	Metallo-dependent hydrolases
Y11_05191	SSF54909	Dimeric alpha+beta barrel
Y11_05201	SSF50249	Nucleic acid-binding proteins
Y11_05211	SSF55120	Pseudouridine synthase
Y11_05211	SSF55174	Alpha-L RNA-binding motif
Y11_05221	SSF52972	ITPase-like
Y11_05241	SSF57829	Zn-binding ribosomal proteins
Y11_05251	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Y11_05261	SSF53901	Thiolase-like
Y11_05271	SSF52151	FabD/lysophospholipase-like
Y11_05271	SSF55048	Probable ACP-binding domain of malonyl-CoA ACP transacylase
Y11_05281	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_05291	SSF47336	ACP-like
Y11_05301	SSF53901	Thiolase-like
Y11_05311	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Y11_05331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_05341	SSF48019	post-AAA+ oligomerization domain-like
Y11_05341	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_05351	SSF51556	Metallo-dependent hydrolases
Y11_05361	SSF55604	Glucose permease domain IIB
Y11_05371	SSF50630	Acid proteases
Y11_05381	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_05381	SSF90123	ABC transporter transmembrane region
Y11_05401	SSF102114	Radical SAM enzymes
Y11_05421	SSF46785	"Winged helix" DNA-binding domain
Y11_05421	SSF53850	Periplasmic binding protein-like II
Y11_05431	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_05431	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Y11_05441	SSF54197	HIT-like
Y11_05471	SSF56112	Protein kinase-like (PK-like)
Y11_05481	SSF51445	(Trans)glycosidases
Y11_05491	SSF53474	alpha/beta-Hydrolases
Y11_05501	SSF51905	FAD/NAD(P)-binding domain
Y11_05521	SSF141259	CarD-like
Y11_05521	SSF143517	TRCF domain-like
Y11_05521	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_05541	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_05561	SSF53067	Actin-like ATPase domain
Y11_05571	SSF52467	DHS-like NAD/FAD-binding domain
Y11_05581	SSF53187	Zn-dependent exopeptidases
Y11_05581	SSF55031	Bacterial exopeptidase dimerisation domain
Y11_05591	SSF51197	Clavaminate synthase-like
Y11_05601	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_05601	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_05611	SSF52172	CheY-like
Y11_05621	SSF56925	OMPA-like
Y11_05631	SSF48557	L-aspartase-like
Y11_05641	SSF101322	YcfC-like
Y11_05651	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_05661	SSF55811	Nudix
Y11_05671	SSF55120	Pseudouridine synthase
Y11_05681	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Y11_05751	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Y11_05761	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_05791	SSF103473	MFS general substrate transporter
Y11_05801	SSF49899	Concanavalin A-like lectins/glucanases
Y11_05801	SSF75005	Arabinanase/levansucrase/invertase
Y11_05811	SSF47413	lambda repressor-like DNA-binding domains
Y11_05811	SSF53822	Periplasmic binding protein-like I
Y11_05831	SSF55785	PYP-like sensor domain (PAS domain)
Y11_05831	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_05841	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
Y11_05841	SSF56672	DNA/RNA polymerases
Y11_05851	SSF51306	LexA/Signal peptidase
Y11_05871	SSF53383	PLP-dependent transferases
Y11_05881	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_05891	SSF46785	"Winged helix" DNA-binding domain
Y11_05901	SSF54909	Dimeric alpha+beta barrel
Y11_05941	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_05961	SSF46689	Homeodomain-like
Y11_06001	SSF55073	Nucleotide cyclase
Y11_06001	SSF55785	PYP-like sensor domain (PAS domain)
Y11_06011	SSF56219	DNase I-like
Y11_06021	SSF56112	Protein kinase-like (PK-like)
Y11_06031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_06031	SSF90123	ABC transporter transmembrane region
Y11_06041	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_06081	SSF46689	Homeodomain-like
Y11_06171	SSF56925	OMPA-like
Y11_06191	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
Y11_06201	SSF56519	Penicillin binding protein dimerisation domain
Y11_06201	SSF56601	beta-lactamase/transpeptidase-like
Y11_06211	SSF56601	beta-lactamase/transpeptidase-like
Y11_06221	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_06241	SSF55073	Nucleotide cyclase
Y11_06241	SSF55785	PYP-like sensor domain (PAS domain)
Y11_06251	SSF56935	Porins
Y11_06301	SSF52728	PTS IIb component
Y11_06301	SSF53062	PTS system fructose IIA component-like
Y11_06321	SSF54631	CBS-domain pair
Y11_06321	SSF56176	FAD-binding/transporter-associated domain-like
Y11_06341	SSF143548	Serine metabolism enzymes domain
Y11_06361	SSF55811	Nudix
Y11_06371	SSF56322	ADC synthase
Y11_06391	SSF51246	Rudiment single hybrid motif
Y11_06391	SSF52440	PreATP-grasp domain
Y11_06391	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_06401	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_06421	SSF88697	PUA domain-like
Y11_06441	SSF50993	Peptidase/esterase 'gauge' domain
Y11_06441	SSF53474	alpha/beta-Hydrolases
Y11_06451	SSF53098	Ribonuclease H-like
Y11_06471	SSF53474	alpha/beta-Hydrolases
Y11_06481	SSF46575	DNA polymerase III theta subunit-like
Y11_06491	SSF47240	Ferritin-like
Y11_06511	SSF81296	E set domains
Y11_06541	SSF56349	DNA breaking-rejoining enzymes
Y11_06561	SSF69279	Phage tail proteins
Y11_06601	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_06621	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_06651	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_06681	SSF56784	HAD-like
Y11_06691	SSF103473	MFS general substrate transporter
Y11_06701	SSF46785	"Winged helix" DNA-binding domain
Y11_06701	SSF53067	Actin-like ATPase domain
Y11_06741	SSF52172	CheY-like
Y11_06751	SSF103190	Sensory domain-like
Y11_06751	SSF55785	PYP-like sensor domain (PAS domain)
Y11_06751	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_06761	SSF100950	NagB/RpiA/CoA transferase-like
Y11_06761	SSF46785	"Winged helix" DNA-binding domain
Y11_06771	SSF142764	YgbK-like
Y11_06781	SSF53639	AraD/HMP-PK domain-like
Y11_06791	SSF53639	AraD/HMP-PK domain-like
Y11_06801	SSF51658	Xylose isomerase-like
Y11_06811	SSF56601	beta-lactamase/transpeptidase-like
Y11_06821	SSF103473	MFS general substrate transporter
Y11_06831	SSF53067	Actin-like ATPase domain
Y11_06901	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_06911	SSF52833	Thioredoxin-like
Y11_06921	SSF46626	Cytochrome c
Y11_06931	SSF51197	Clavaminate synthase-like
Y11_06931	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_06941	SSF46785	"Winged helix" DNA-binding domain
Y11_06941	SSF53850	Periplasmic binding protein-like II
Y11_06951	SSF50447	Translation proteins
Y11_06951	SSF55186	ThrRS/AlaRS common domain
Y11_06971	SSF53092	Creatinase/prolidase N-terminal domain
Y11_06971	SSF55920	Creatinase/aminopeptidase
Y11_06981	SSF48452	TPR-like
Y11_07001	SSF88713	Glycoside hydrolase/deacetylase
Y11_07011	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_07031	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_07051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_07081	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Y11_07081	SSF52374	Nucleotidylyl transferase
Y11_07081	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
Y11_07091	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Y11_07101	SSF110395	CutC-like
Y11_07151	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_07181	SSF50182	Sm-like ribonucleoproteins
Y11_07181	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Y11_07181	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Y11_07191	SSF47616	GST C-terminal domain-like
Y11_07191	SSF52833	Thioredoxin-like
Y11_07201	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_07241	SSF88697	PUA domain-like
Y11_07261	SSF55073	Nucleotide cyclase
Y11_07261	SSF55785	PYP-like sensor domain (PAS domain)
Y11_07271	SSF49401	Bacterial adhesins
Y11_07291	SSF49354	PapD-like
Y11_07331	SSF103473	MFS general substrate transporter
Y11_07341	SSF46785	"Winged helix" DNA-binding domain
Y11_07341	SSF53850	Periplasmic binding protein-like II
Y11_07371	SSF55781	GAF domain-like
Y11_07381	SSF48657	FinO-like
Y11_07391	SSF50156	PDZ domain-like
Y11_07391	SSF52096	ClpP/crotonase
Y11_07421	SSF103473	MFS general substrate transporter
Y11_07431	SSF82171	DPP6 N-terminal domain-like
Y11_07441	SSF46785	"Winged helix" DNA-binding domain
Y11_07441	SSF55781	GAF domain-like
Y11_07451	SSF47090	PGBD-like
Y11_07451	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Y11_07491	SSF118215	Proton glutamate symport protein
Y11_07511	SSF56935	Porins
Y11_07531	SSF53850	Periplasmic binding protein-like II
Y11_07541	SSF50331	MOP-like
Y11_07541	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_07551	SSF161098	MetI-like
Y11_07561	SSF161098	MetI-like
Y11_07591	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_07601	SSF51182	RmlC-like cupins
Y11_07611	SSF51182	RmlC-like cupins
Y11_07621	SSF56784	HAD-like
Y11_07641	SSF46785	"Winged helix" DNA-binding domain
Y11_07641	SSF53850	Periplasmic binding protein-like II
Y11_07651	SSF100950	NagB/RpiA/CoA transferase-like
Y11_07661	SSF52096	ClpP/crotonase
Y11_07671	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_07681	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
Y11_07681	SSF52242	Cobalamin (vitamin B12)-binding domain
Y11_07691	SSF56112	Protein kinase-like (PK-like)
Y11_07701	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Y11_07711	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Y11_07721	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_07731	SSF53807	"Helical backbone" metal receptor
Y11_07741	SSF53955	Lysozyme-like
Y11_07781	SSF54427	NTF2-like
Y11_07851	SSF52954	Class II aaRS ABD-related
Y11_07851	SSF55186	ThrRS/AlaRS common domain
Y11_07851	SSF55681	Class II aaRS and biotin synthetases
Y11_07851	SSF81271	TGS-like
Y11_07861	SSF55200	Translation initiation factor IF3, C-terminal domain
Y11_07871	SSF143034	L35p-like
Y11_07881	SSF74731	Ribosomal protein L20
Y11_07891	SSF46589	tRNA-binding arm
Y11_07891	SSF55681	Class II aaRS and biotin synthetases
Y11_07901	SSF46955	Putative DNA-binding domain
Y11_07901	SSF50249	Nucleic acid-binding proteins
Y11_07901	SSF54991	Anticodon-binding domain of PheRS
Y11_07901	SSF55681	Class II aaRS and biotin synthetases
Y11_07901	SSF56037	PheT/TilS domain
Y11_07911	SSF47729	IHF-like DNA-binding proteins
Y11_07951	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Y11_07961	SSF52833	Thioredoxin-like
Y11_07971	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_07981	SSF53383	PLP-dependent transferases
Y11_07991	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_08001	SSF50486	FMT C-terminal domain-like
Y11_08001	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_08001	SSF53328	Formyltransferase
Y11_08011	SSF88713	Glycoside hydrolase/deacetylase
Y11_08031	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_08041	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_08051	SSF54001	Cysteine proteinases
Y11_08061	SSF55681	Class II aaRS and biotin synthetases
Y11_08061	SSF82649	SufE/NifU
Y11_08081	SSF53807	"Helical backbone" metal receptor
Y11_08091	SSF144064	Heme iron utilization protein-like
Y11_08101	SSF56935	Porins
Y11_08121	SSF51569	Aldolase
Y11_08131	SSF47454	A DNA-binding domain in eukaryotic transcription factors
Y11_08141	SSF51621	Phosphoenolpyruvate/pyruvate domain
Y11_08141	SSF52009	Phosphohistidine domain
Y11_08141	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_08161	SSF46548	alpha-helical ferredoxin
Y11_08161	SSF55103	FAD-linked oxidases, C-terminal domain
Y11_08161	SSF56176	FAD-binding/transporter-associated domain-like
Y11_08171	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Y11_08181	SSF89360	HesB-like domain
Y11_08191	SSF101960	Stabilizer of iron transporter SufD
Y11_08201	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_08211	SSF101960	Stabilizer of iron transporter SufD
Y11_08221	SSF53383	PLP-dependent transferases
Y11_08231	SSF82649	SufE/NifU
Y11_08241	SSF141523	L,D-transpeptidase catalytic domain-like
Y11_08251	SSF50800	PK beta-barrel domain-like
Y11_08251	SSF51621	Phosphoenolpyruvate/pyruvate domain
Y11_08251	SSF52935	PK C-terminal domain-like
Y11_08271	SSF63380	Riboflavin synthase domain-like
Y11_08281	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_08291	SSF103473	MFS general substrate transporter
Y11_08301	SSF46785	"Winged helix" DNA-binding domain
Y11_08301	SSF53850	Periplasmic binding protein-like II
Y11_08311	SSF47413	lambda repressor-like DNA-binding domains
Y11_08311	SSF53822	Periplasmic binding protein-like I
Y11_08321	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Y11_08321	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Y11_08331	SSF54001	Cysteine proteinases
Y11_08341	SSF52833	Thioredoxin-like
Y11_08351	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Y11_08361	SSF51395	FMN-linked oxidoreductases
Y11_08371	SSF46689	Homeodomain-like
Y11_08371	SSF48498	Tetracyclin repressor-like, C-terminal domain
Y11_08381	SSF53649	Alkaline phosphatase-like
Y11_08401	SSF51430	NAD(P)-linked oxidoreductase
Y11_08421	SSF111369	HlyD-like secretion proteins
Y11_08441	SSF46785	"Winged helix" DNA-binding domain
Y11_08471	SSF53067	Actin-like ATPase domain
Y11_08481	SSF141488	YdhA-like
Y11_08491	SSF50475	FMN-binding split barrel
Y11_08501	SSF52374	Nucleotidylyl transferase
Y11_08501	SSF55174	Alpha-L RNA-binding motif
Y11_08511	SSF53613	Ribokinase-like
Y11_08521	SSF47616	GST C-terminal domain-like
Y11_08521	SSF52833	Thioredoxin-like
Y11_08561	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Y11_08571	SSF103473	MFS general substrate transporter
Y11_08591	SSF46785	"Winged helix" DNA-binding domain
Y11_08591	SSF53850	Periplasmic binding protein-like II
Y11_08601	SSF69118	AhpD-like
Y11_08621	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_08631	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_08641	SSF161098	MetI-like
Y11_08651	SSF161098	MetI-like
Y11_08661	SSF53850	Periplasmic binding protein-like II
Y11_08681	SSF56399	ADP-ribosylation
Y11_08701	SSF46689	Homeodomain-like
Y11_08701	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_08781	SSF46689	Homeodomain-like
Y11_08781	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_08781	SSF55785	PYP-like sensor domain (PAS domain)
Y11_08791	SSF52833	Thioredoxin-like
Y11_08801	SSF51604	Enolase C-terminal domain-like
Y11_08801	SSF54826	Enolase N-terminal domain-like
Y11_08811	SSF53187	Zn-dependent exopeptidases
Y11_08821	SSF53850	Periplasmic binding protein-like II
Y11_08831	SSF143865	CorA soluble domain-like
Y11_08831	SSF144083	Magnesium transport protein CorA, transmembrane region
Y11_08841	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_08861	SSF51695	PLC-like phosphodiesterases
Y11_08871	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_08871	SSF52922	TK C-terminal domain-like
Y11_08871	SSF53323	Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
Y11_08871	SSF54862	4Fe-4S ferredoxins
Y11_08891	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_08921	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_08921	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Y11_08961	SSF52218	Flavoproteins
Y11_08971	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_08991	SSF47413	lambda repressor-like DNA-binding domains
Y11_09001	SSF50494	Trypsin-like serine proteases
Y11_09021	SSF55486	Metalloproteases ("zincins"), catalytic domain
Y11_09041	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_09041	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_09051	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_09051	SSF52172	CheY-like
Y11_09091	SSF159871	YdgH-like
Y11_09101	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_09101	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Y11_09111	SSF52467	DHS-like NAD/FAD-binding domain
Y11_09121	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_09131	SSF46785	"Winged helix" DNA-binding domain
Y11_09131	SSF51206	cAMP-binding domain-like
Y11_09141	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Y11_09141	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Y11_09151	SSF53187	Zn-dependent exopeptidases
Y11_09171	SSF55136	Probable bacterial effector-binding domain
Y11_09181	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_09191	SSF53649	Alkaline phosphatase-like
Y11_09201	SSF53613	Ribokinase-like
Y11_09211	SSF103473	MFS general substrate transporter
Y11_09241	SSF158682	TerB-like
Y11_09251	SSF56784	HAD-like
Y11_09261	SSF55021	ACT-like
Y11_09271	SSF52467	DHS-like NAD/FAD-binding domain
Y11_09271	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_09281	SSF54001	Cysteine proteinases
Y11_09291	SSF47090	PGBD-like
Y11_09291	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Y11_09371	SSF103473	MFS general substrate transporter
Y11_09381	SSF56655	Carbohydrate phosphatase
Y11_09391	SSF47413	lambda repressor-like DNA-binding domains
Y11_09391	SSF53822	Periplasmic binding protein-like I
Y11_09401	SSF53167	Purine and uridine phosphorylases
Y11_09411	SSF53167	Purine and uridine phosphorylases
Y11_09421	SSF53041	Resolvase-like
Y11_09431	SSF140931	Fic-like
Y11_09441	SSF46785	"Winged helix" DNA-binding domain
Y11_09441	SSF53850	Periplasmic binding protein-like II
Y11_09461	SSF56317	Carbon-nitrogen hydrolase
Y11_09481	SSF55909	Pentein
Y11_09501	SSF161098	MetI-like
Y11_09511	SSF161098	MetI-like
Y11_09521	SSF46785	"Winged helix" DNA-binding domain
Y11_09521	SSF54909	Dimeric alpha+beta barrel
Y11_09531	SSF53187	Zn-dependent exopeptidases
Y11_09541	SSF46785	"Winged helix" DNA-binding domain
Y11_09551	SSF111369	HlyD-like secretion proteins
Y11_09571	SSF47616	GST C-terminal domain-like
Y11_09571	SSF52833	Thioredoxin-like
Y11_09581	SSF63829	Calcium-dependent phosphotriesterase
Y11_09591	SSF46565	Chaperone J-domain
Y11_09671	SSF47413	lambda repressor-like DNA-binding domains
Y11_09681	SSF47413	lambda repressor-like DNA-binding domains
Y11_09751	SSF159871	YdgH-like
Y11_09781	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_09791	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_09841	SSF81340	Clc chloride channel
Y11_09851	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_09861	SSF46785	"Winged helix" DNA-binding domain
Y11_09861	SSF53067	Actin-like ATPase domain
Y11_09871	SSF46785	"Winged helix" DNA-binding domain
Y11_09871	SSF53850	Periplasmic binding protein-like II
Y11_09881	SSF103473	MFS general substrate transporter
Y11_09911	SSF56601	beta-lactamase/transpeptidase-like
Y11_09921	SSF56596	Replication terminator protein (Tus)
Y11_09931	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_09961	SSF48557	L-aspartase-like
Y11_09971	SSF51182	RmlC-like cupins
Y11_09991	SSF51161	Trimeric LpxA-like enzymes
Y11_10001	SSF53822	Periplasmic binding protein-like I
Y11_10011	SSF55604	Glucose permease domain IIB
Y11_10021	SSF53383	PLP-dependent transferases
Y11_10031	SSF51556	Metallo-dependent hydrolases
Y11_10051	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_10061	SSF46689	Homeodomain-like
Y11_10061	SSF51215	Regulatory protein AraC
Y11_10091	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_10101	SSF53822	Periplasmic binding protein-like I
Y11_10111	SSF53067	Actin-like ATPase domain
Y11_10121	SSF50443	FucI/AraA C-terminal domain-like
Y11_10121	SSF53743	FucI/AraA N-terminal and middle domains
Y11_10131	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_10141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_10141	SSF90123	ABC transporter transmembrane region
Y11_10171	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_10171	SSF90123	ABC transporter transmembrane region
Y11_10191	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_10221	SSF54862	4Fe-4S ferredoxins
Y11_10231	SSF142019	Nqo1 FMN-binding domain-like
Y11_10231	SSF46548	alpha-helical ferredoxin
Y11_10261	SSF46689	Homeodomain-like
Y11_10261	SSF55136	Probable bacterial effector-binding domain
Y11_10311	SSF48150	DNA-glycosylase
Y11_10331	SSF58100	Bacterial hemolysins
Y11_10361	SSF50692	ADC-like
Y11_10361	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Y11_10381	SSF50249	Nucleic acid-binding proteins
Y11_10421	SSF51569	Aldolase
Y11_10431	SSF100950	NagB/RpiA/CoA transferase-like
Y11_10431	SSF46785	"Winged helix" DNA-binding domain
Y11_10451	SSF53639	AraD/HMP-PK domain-like
Y11_10491	SSF55159	eIF1-like
Y11_10501	SSF51366	Ribulose-phoshate binding barrel
Y11_10511	SSF159871	YdgH-like
Y11_10541	SSF47413	lambda repressor-like DNA-binding domains
Y11_10541	SSF51182	RmlC-like cupins
Y11_10551	SSF47598	Ribbon-helix-helix
Y11_10561	SSF48452	TPR-like
Y11_10581	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
Y11_10591	SSF142695	RibA-like
Y11_10601	SSF52016	LeuD/IlvD-like
Y11_10601	SSF53732	Aconitase iron-sulfur domain
Y11_10631	SSF46785	"Winged helix" DNA-binding domain
Y11_10631	SSF53850	Periplasmic binding protein-like II
Y11_10641	SSF56712	Prokaryotic type I DNA topoisomerase
Y11_10641	SSF57783	Zinc beta-ribbon
Y11_10671	SSF52096	ClpP/crotonase
Y11_10681	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_10691	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_10711	SSF55120	Pseudouridine synthase
Y11_10711	SSF55174	Alpha-L RNA-binding motif
Y11_10721	SSF55821	YrdC/RibB
Y11_10731	SSF89550	PHP domain-like
Y11_10751	SSF56322	ADC synthase
Y11_10761	SSF52317	Class I glutamine amidotransferase-like
Y11_10771	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Y11_10771	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Y11_10781	SSF51366	Ribulose-phoshate binding barrel
Y11_10791	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_10801	SSF51366	Ribulose-phoshate binding barrel
Y11_10821	SSF56925	OMPA-like
Y11_10851	SSF52091	SpoIIaa-like
Y11_10871	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Y11_10881	SSF74653	TolA/TonB C-terminal domain
Y11_10891	SSF54909	Dimeric alpha+beta barrel
Y11_10911	SSF141868	EAL domain-like
Y11_10931	SSF56024	Phospholipase D/nuclease
Y11_10941	SSF102816	Putative dsDNA mimic
Y11_10951	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_10961	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_10971	SSF161098	MetI-like
Y11_10981	SSF161098	MetI-like
Y11_10991	SSF53850	Periplasmic binding protein-like II
Y11_11001	SSF53850	Periplasmic binding protein-like II
Y11_11021	SSF53720	ALDH-like
Y11_11021	SSF56796	Dehydroquinate synthase-like
Y11_11031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_11031	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Y11_11041	SSF81273	H-NS histone-like proteins
Y11_11051	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_11051	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_11051	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Y11_11071	SSF52172	CheY-like
Y11_11081	SSF52151	FabD/lysophospholipase-like
Y11_11091	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_11121	SSF103642	Sec-C motif
Y11_11121	SSF54427	NTF2-like
Y11_11131	SSF53328	Formyltransferase
Y11_11131	SSF55021	ACT-like
Y11_11141	SSF46785	"Winged helix" DNA-binding domain
Y11_11161	SSF56219	DNase I-like
Y11_11171	SSF55811	Nudix
Y11_11191	SSF56712	Prokaryotic type I DNA topoisomerase
Y11_11201	SSF55326	PurM N-terminal domain-like
Y11_11201	SSF56042	PurM C-terminal domain-like
Y11_11211	SSF55469	FMN-dependent nitroreductase-like
Y11_11221	SSF52096	ClpP/crotonase
Y11_11231	SSF53774	Glutaminase/Asparaginase
Y11_11241	SSF52499	Isochorismatase-like hydrolases
Y11_11281	SSF51316	Mss4-like
Y11_11301	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_11301	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_11311	SSF74650	Galactose mutarotase-like
Y11_11321	SSF56935	Porins
Y11_11331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_11351	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_11371	SSF46785	"Winged helix" DNA-binding domain
Y11_11371	SSF53850	Periplasmic binding protein-like II
Y11_11381	SSF51182	RmlC-like cupins
Y11_11391	SSF141868	EAL domain-like
Y11_11391	SSF55073	Nucleotide cyclase
Y11_11391	SSF55781	GAF domain-like
Y11_11391	SSF55785	PYP-like sensor domain (PAS domain)
Y11_11401	SSF103473	MFS general substrate transporter
Y11_11411	SSF50621	Alanine racemase C-terminal domain-like
Y11_11411	SSF51419	PLP-binding barrel
Y11_11421	SSF51905	FAD/NAD(P)-binding domain
Y11_11421	SSF54373	FAD-linked reductases, C-terminal domain
Y11_11451	SSF46785	"Winged helix" DNA-binding domain
Y11_11451	SSF48008	GntR ligand-binding domain-like
Y11_11491	SSF158442	DsbB-like
Y11_11551	SSF56529	FAH
Y11_11561	SSF53955	Lysozyme-like
Y11_11571	SSF160191	YcgL-like
Y11_11591	SSF63848	Cell-division inhibitor MinC, C-terminal domain
Y11_11601	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_11611	SSF55229	Cell division protein MinE topological specificity domain
Y11_11621	SSF47819	HRDC-like
Y11_11621	SSF53098	Ribonuclease H-like
Y11_11631	SSF56801	Acetyl-CoA synthetase-like
Y11_11651	SSF53067	Actin-like ATPase domain
Y11_11661	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_11671	SSF55298	YjgF-like
Y11_11681	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_11691	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_11711	SSF51569	Aldolase
Y11_11721	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_11721	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_11731	SSF46689	Homeodomain-like
Y11_11731	SSF53697	SIS domain
Y11_11741	SSF50800	PK beta-barrel domain-like
Y11_11741	SSF51621	Phosphoenolpyruvate/pyruvate domain
Y11_11741	SSF52935	PK C-terminal domain-like
Y11_11771	SSF51261	Duplicated hybrid motif
Y11_11781	SSF53807	"Helical backbone" metal receptor
Y11_11791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_11801	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Y11_11811	SSF103473	MFS general substrate transporter
Y11_11821	SSF46785	"Winged helix" DNA-binding domain
Y11_11821	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_11831	SSF46929	DNA helicase RuvA subunit, C-terminal domain
Y11_11831	SSF47781	RuvA domain 2-like
Y11_11831	SSF50249	Nucleic acid-binding proteins
Y11_11841	SSF53098	Ribonuclease H-like
Y11_11851	SSF75625	YebC-like
Y11_11861	SSF55811	Nudix
Y11_11871	SSF50249	Nucleic acid-binding proteins
Y11_11871	SSF55261	GAD domain-like
Y11_11871	SSF55681	Class II aaRS and biotin synthetases
Y11_11901	SSF52499	Isochorismatase-like hydrolases
Y11_11911	SSF117396	TM1631-like
Y11_11921	SSF161084	MAPEG domain-like
Y11_11931	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_11941	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_11961	SSF100950	NagB/RpiA/CoA transferase-like
Y11_11961	SSF46785	"Winged helix" DNA-binding domain
Y11_11971	SSF51569	Aldolase
Y11_11981	SSF52728	PTS IIb component
Y11_12011	SSF53062	PTS system fructose IIA component-like
Y11_12021	SSF53697	SIS domain
Y11_12031	SSF51569	Aldolase
Y11_12051	SSF51261	Duplicated hybrid motif
Y11_12091	SSF89623	Ribose/Galactose isomerase RpiB/AlsB
Y11_12101	SSF103515	Autotransporter
Y11_12101	SSF51126	Pectin lyase-like
Y11_12121	SSF50814	Lipocalins
Y11_12131	SSF51182	RmlC-like cupins
Y11_12141	SSF51338	Composite domain of metallo-dependent hydrolases
Y11_12141	SSF51556	Metallo-dependent hydrolases
Y11_12151	SSF46785	"Winged helix" DNA-binding domain
Y11_12151	SSF64288	Chorismate lyase-like
Y11_12161	SSF51338	Composite domain of metallo-dependent hydrolases
Y11_12161	SSF51556	Metallo-dependent hydrolases
Y11_12171	SSF53187	Zn-dependent exopeptidases
Y11_12181	SSF48295	TrpR-like
Y11_12191	SSF53098	Ribonuclease H-like
Y11_12201	SSF56935	Porins
Y11_12221	SSF53187	Zn-dependent exopeptidases
Y11_12231	SSF55909	Pentein
Y11_12241	SSF55909	Pentein
Y11_12251	SSF53720	ALDH-like
Y11_12261	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_12271	SSF53383	PLP-dependent transferases
Y11_12281	SSF53383	PLP-dependent transferases
Y11_12321	SSF158472	HAMP domain-like
Y11_12321	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_12331	SSF46785	"Winged helix" DNA-binding domain
Y11_12331	SSF53850	Periplasmic binding protein-like II
Y11_12351	SSF103473	MFS general substrate transporter
Y11_12361	SSF63380	Riboflavin synthase domain-like
Y11_12391	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_12391	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_12401	SSF46785	"Winged helix" DNA-binding domain
Y11_12411	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_12431	SSF103473	MFS general substrate transporter
Y11_12451	SSF89155	TorD-like
Y11_12461	SSF89550	PHP domain-like
Y11_12471	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_12481	SSF51695	PLC-like phosphodiesterases
Y11_12491	SSF55073	Nucleotide cyclase
Y11_12501	SSF52091	SpoIIaa-like
Y11_12511	SSF51569	Aldolase
Y11_12521	SSF48452	TPR-like
Y11_12541	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_12551	SSF75620	Release factor
Y11_12561	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_12561	SSF69075	Glutamyl tRNA-reductase dimerization domain
Y11_12561	SSF69742	Glutamyl tRNA-reductase catalytic, N-terminal domain
Y11_12571	SSF89392	Prokaryotic lipoproteins and lipoprotein localization factors
Y11_12581	SSF54211	Ribosomal protein S5 domain 2-like
Y11_12581	SSF55060	GHMP Kinase, C-terminal domain
Y11_12591	SSF53271	PRTase-like
Y11_12621	SSF53178	Peptidyl-tRNA hydrolase-like
Y11_12641	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_12641	SSF81271	TGS-like
Y11_12651	SSF56601	beta-lactamase/transpeptidase-like
Y11_12661	SSF46785	"Winged helix" DNA-binding domain
Y11_12661	SSF53850	Periplasmic binding protein-like II
Y11_12671	SSF158682	TerB-like
Y11_12691	SSF53474	alpha/beta-Hydrolases
Y11_12701	SSF53955	Lysozyme-like
Y11_12731	SSF51161	Trimeric LpxA-like enzymes
Y11_12741	SSF47413	lambda repressor-like DNA-binding domains
Y11_12751	SSF46785	"Winged helix" DNA-binding domain
Y11_12751	SSF53850	Periplasmic binding protein-like II
Y11_12761	SSF103473	MFS general substrate transporter
Y11_12781	SSF53098	Ribonuclease H-like
Y11_12811	SSF55166	Hedgehog/DD-peptidase
Y11_12851	SSF52200	Toll/Interleukin receptor TIR domain
Y11_12891	SSF160719	gpW/gp25-like
Y11_12931	SSF88874	Receptor-binding domain of short tail fibre protein gp12
Y11_13031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_13071	SSF56349	DNA breaking-rejoining enzymes
Y11_13091	SSF56349	DNA breaking-rejoining enzymes
Y11_13111	SSF52113	BRCT domain
Y11_13311	SSF53955	Lysozyme-like
Y11_13361	SSF47413	lambda repressor-like DNA-binding domains
Y11_13371	SSF56672	DNA/RNA polymerases
Y11_13391	SSF160719	gpW/gp25-like
Y11_13501	SSF69279	Phage tail proteins
Y11_13541	SSF46600	C-terminal UvrC-binding domain of UvrB
Y11_13541	SSF47781	RuvA domain 2-like
Y11_13541	SSF82771	GIY-YIG endonuclease
Y11_13551	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_13551	SSF52172	CheY-like
Y11_13591	SSF51011	Glycosyl hydrolase domain
Y11_13591	SSF51445	(Trans)glycosidases
Y11_13601	SSF51182	RmlC-like cupins
Y11_13621	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_13631	SSF53098	Ribonuclease H-like
Y11_13641	SSF46689	Homeodomain-like
Y11_13661	SSF46689	Homeodomain-like
Y11_13661	SSF48498	Tetracyclin repressor-like, C-terminal domain
Y11_13681	SSF51679	Bacterial luciferase-like
Y11_13691	SSF52499	Isochorismatase-like hydrolases
Y11_13701	SSF55298	YjgF-like
Y11_13711	SSF53474	alpha/beta-Hydrolases
Y11_13731	SSF55469	FMN-dependent nitroreductase-like
Y11_13741	SSF50475	FMN-binding split barrel
Y11_13771	SSF46689	Homeodomain-like
Y11_13781	SSF117281	Kelch motif
Y11_13791	SSF47413	lambda repressor-like DNA-binding domains
Y11_13801	SSF52218	Flavoproteins
Y11_13821	SSF54909	Dimeric alpha+beta barrel
Y11_13831	SSF49503	Cupredoxins
Y11_13891	SSF53098	Ribonuclease H-like
Y11_13911	SSF47598	Ribbon-helix-helix
Y11_13911	SSF51730	FAD-linked oxidoreductase
Y11_13911	SSF53720	ALDH-like
Y11_13911	SSF81935	N-terminal domain of bifunctional PutA protein
Y11_13931	SSF46785	"Winged helix" DNA-binding domain
Y11_13941	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_13951	SSF161098	MetI-like
Y11_13961	SSF53850	Periplasmic binding protein-like II
Y11_13971	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_14001	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Y11_14001	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Y11_14021	SSF64518	Phase 1 flagellin
Y11_14041	SSF64518	Phase 1 flagellin
Y11_14061	SSF64518	Phase 1 flagellin
Y11_14081	SSF101116	Flagellar export chaperone FliS
Y11_14101	SSF46689	Homeodomain-like
Y11_14111	SSF109604	HD-domain/PDEase-like
Y11_14111	SSF55781	GAF domain-like
Y11_14121	SSF48150	DNA-glycosylase
Y11_14151	SSF54857	DNA damage-inducible protein DinI
Y11_14211	SSF48029	FliG
Y11_14231	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_14271	SSF101801	Surface presentation of antigens (SPOA)
Y11_14271	SSF103039	CheC-like
Y11_14281	SSF101801	Surface presentation of antigens (SPOA)
Y11_14331	SSF64518	Phase 1 flagellin
Y11_14351	SSF64518	Phase 1 flagellin
Y11_14391	SSF117143	Flagellar hook protein flgE
Y11_14401	SSF117143	Flagellar hook protein flgE
Y11_14411	SSF117143	Flagellar hook protein flgE
Y11_14461	SSF101498	Anti-sigma factor FlgM
Y11_14471	SSF140566	FlgN-like
Y11_14481	SSF49373	Invasin/intimin cell-adhesion fragments
Y11_14481	SSF56436	C-type lectin-like
Y11_14531	SSF160544	EscU C-terminal domain-like
Y11_14541	SSF52743	Subtilisin-like
Y11_14551	SSF75708	Chemotaxis phosphatase CheZ
Y11_14561	SSF52172	CheY-like
Y11_14571	SSF52172	CheY-like
Y11_14571	SSF52738	Methylesterase CheB, C-terminal domain
Y11_14581	SSF47757	Chemotaxis receptor methyltransferase CheR, N-terminal domain
Y11_14581	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_14591	SSF47170	Aspartate receptor, ligand-binding domain
Y11_14591	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_14601	SSF47170	Aspartate receptor, ligand-binding domain
Y11_14601	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_14621	SSF50341	CheW-like
Y11_14641	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Y11_14641	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_14641	SSF50341	CheW-like
Y11_14641	SSF55052	CheY-binding domain of CheA
Y11_14641	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_14651	SSF103088	OmpA-like
Y11_14681	SSF160930	FlhC-like
Y11_14691	SSF63592	Flagellar transcriptional activator FlhD
Y11_14701	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_14711	SSF50129	GroES-like
Y11_14711	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_14721	SSF56784	HAD-like
Y11_14721	SSF81653	Calcium ATPase, transduction domain A
Y11_14721	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Y11_14721	SSF81665	Calcium ATPase, transmembrane domain M
Y11_14761	SSF47170	Aspartate receptor, ligand-binding domain
Y11_14761	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_14791	SSF50249	Nucleic acid-binding proteins
Y11_14801	SSF47413	lambda repressor-like DNA-binding domains
Y11_14801	SSF53822	Periplasmic binding protein-like I
Y11_14811	SSF49303	beta-Galactosidase/glucuronidase domain
Y11_14811	SSF49785	Galactose-binding domain-like
Y11_14811	SSF51445	(Trans)glycosidases
Y11_14811	SSF74650	Galactose mutarotase-like
Y11_14831	SSF50129	GroES-like
Y11_14831	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_14851	SSF46785	"Winged helix" DNA-binding domain
Y11_14851	SSF54909	Dimeric alpha+beta barrel
Y11_14891	SSF53254	Phosphoglycerate mutase-like
Y11_14901	SSF51161	Trimeric LpxA-like enzymes
Y11_14901	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_14931	SSF49354	PapD-like
Y11_14931	SSF49584	Periplasmic chaperone C-domain
Y11_14941	SSF141729	FimD N-terminal domain-like
Y11_14981	SSF53067	Actin-like ATPase domain
Y11_14991	SSF53822	Periplasmic binding protein-like I
Y11_15001	SSF55486	Metalloproteases ("zincins"), catalytic domain
Y11_15011	SSF56349	DNA breaking-rejoining enzymes
Y11_15021	SSF46785	"Winged helix" DNA-binding domain
Y11_15021	SSF53850	Periplasmic binding protein-like II
Y11_15041	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_15051	SSF53098	Ribonuclease H-like
Y11_15071	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_15091	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_15101	SSF50494	Trypsin-like serine proteases
Y11_15111	SSF56281	Metallo-hydrolase/oxidoreductase
Y11_15131	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_15131	SSF52172	CheY-like
Y11_15141	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Y11_15141	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_15141	SSF52172	CheY-like
Y11_15141	SSF53850	Periplasmic binding protein-like II
Y11_15141	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_15151	SSF49401	Bacterial adhesins
Y11_15161	SSF49354	PapD-like
Y11_15161	SSF49584	Periplasmic chaperone C-domain
Y11_15171	SSF141729	FimD N-terminal domain-like
Y11_15181	SSF49401	Bacterial adhesins
Y11_15191	SSF49354	PapD-like
Y11_15191	SSF49584	Periplasmic chaperone C-domain
Y11_15221	SSF55120	Pseudouridine synthase
Y11_15241	SSF55804	Phoshotransferase/anion transport protein
Y11_15251	SSF103473	MFS general substrate transporter
Y11_15261	SSF51197	Clavaminate synthase-like
Y11_15271	SSF56214	4'-phosphopantetheinyl transferase
Y11_15341	SSF100950	NagB/RpiA/CoA transferase-like
Y11_15351	SSF51621	Phosphoenolpyruvate/pyruvate domain
Y11_15371	SSF52374	Nucleotidylyl transferase
Y11_15371	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_15381	SSF103190	Sensory domain-like
Y11_15381	SSF55785	PYP-like sensor domain (PAS domain)
Y11_15381	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_15381	SSF55890	Sporulation response regulatory protein Spo0B
Y11_15391	SSF52172	CheY-like
Y11_15401	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_15401	SSF52172	CheY-like
Y11_15411	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_15421	SSF103473	MFS general substrate transporter
Y11_15431	SSF53850	Periplasmic binding protein-like II
Y11_15441	SSF161098	MetI-like
Y11_15451	SSF50331	MOP-like
Y11_15451	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_15461	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_15461	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_15481	SSF46785	"Winged helix" DNA-binding domain
Y11_15481	SSF53383	PLP-dependent transferases
Y11_15491	SSF46689	Homeodomain-like
Y11_15491	SSF48498	Tetracyclin repressor-like, C-terminal domain
Y11_15501	SSF50341	CheW-like
Y11_15501	SSF52172	CheY-like
Y11_15511	SSF56601	beta-lactamase/transpeptidase-like
Y11_15521	SSF100950	NagB/RpiA/CoA transferase-like
Y11_15521	SSF46785	"Winged helix" DNA-binding domain
Y11_15531	SSF56784	HAD-like
Y11_15541	SSF51366	Ribulose-phoshate binding barrel
Y11_15581	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_15581	SSF69864	Argininosuccinate synthetase, C-terminal domain
Y11_15591	SSF160719	gpW/gp25-like
Y11_15601	SSF144059	ImpE-like
Y11_15631	SSF69255	gp5 N-terminal domain-like
Y11_15631	SSF69279	Phage tail proteins
Y11_15631	SSF69349	Phage fibre proteins
Y11_15641	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_15651	SSF103088	OmpA-like
Y11_15681	SSF141452	Hcp1-like
Y11_15711	SSF49401	Bacterial adhesins
Y11_15721	SSF141729	FimD N-terminal domain-like
Y11_15731	SSF49354	PapD-like
Y11_15731	SSF49584	Periplasmic chaperone C-domain
Y11_15751	SSF49401	Bacterial adhesins
Y11_15761	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_15761	SSF81923	Double Clp-N motif
Y11_15801	SSF49401	Bacterial adhesins
Y11_15821	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_15841	SSF103088	OmpA-like
Y11_15851	SSF55724	Mog1p/PsbP-like
Y11_15861	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_15881	SSF103473	MFS general substrate transporter
Y11_15901	SSF52733	Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Y11_15911	SSF53254	Phosphoglycerate mutase-like
Y11_15931	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_15941	SSF52317	Class I glutamine amidotransferase-like
Y11_15941	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_15951	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_16001	SSF53790	Tetrapyrrole methylase
Y11_16011	SSF53800	Chelatase
Y11_16031	SSF53790	Tetrapyrrole methylase
Y11_16041	SSF159664	CobE/GbiG C-terminal domain-like
Y11_16041	SSF159672	CbiG N-terminal domain-like
Y11_16051	SSF53790	Tetrapyrrole methylase
Y11_16061	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_16071	SSF53790	Tetrapyrrole methylase
Y11_16081	SSF111342	CbiD-like
Y11_16091	SSF63965	Precorrin-8X methylmutase CbiC/CobH
Y11_16111	SSF52317	Class I glutamine amidotransferase-like
Y11_16111	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_16131	SSF46689	Homeodomain-like
Y11_16141	SSF81338	Aquaporin-like
Y11_16151	SSF143414	CcmK-like
Y11_16161	SSF143414	CcmK-like
Y11_16171	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
Y11_16181	SSF52968	B12-dependent dehydatase associated subunit
Y11_16191	SSF47148	Diol dehydratase, gamma subunit
Y11_16201	SSF53067	Actin-like ATPase domain
Y11_16201	SSF82317	Swiveling domain of dehydratase reactivase alpha subunit
Y11_16211	SSF52968	B12-dependent dehydatase associated subunit
Y11_16221	SSF143414	CcmK-like
Y11_16231	SSF143414	CcmK-like
Y11_16261	SSF159133	EutN/CcmL-like
Y11_16271	SSF143744	GlcG-like
Y11_16271	SSF89028	Cobalamin adenosyltransferase-like
Y11_16281	SSF53720	ALDH-like
Y11_16291	SSF56796	Dehydroquinate synthase-like
Y11_16301	SSF142019	Nqo1 FMN-binding domain-like
Y11_16301	SSF142984	Nqo1 middle domain-like
Y11_16301	SSF46548	alpha-helical ferredoxin
Y11_16311	SSF143414	CcmK-like
Y11_16321	SSF143414	CcmK-like
Y11_16331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_16341	SSF53067	Actin-like ATPase domain
Y11_16351	SSF53790	Tetrapyrrole methylase
Y11_16361	SSF53383	PLP-dependent transferases
Y11_16371	SSF54211	Ribosomal protein S5 domain 2-like
Y11_16381	SSF53822	Periplasmic binding protein-like I
Y11_16391	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_16441	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_16451	SSF53098	Ribonuclease H-like
Y11_16471	SSF56796	Dehydroquinate synthase-like
Y11_16481	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_16491	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_16511	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_16521	SSF53850	Periplasmic binding protein-like II
Y11_16521	SSF54913	GlnB-like
Y11_16531	SSF53720	ALDH-like
Y11_16541	SSF53383	PLP-dependent transferases
Y11_16551	SSF54211	Ribosomal protein S5 domain 2-like
Y11_16551	SSF56784	HAD-like
Y11_16561	SSF52317	Class I glutamine amidotransferase-like
Y11_16571	SSF51366	Ribulose-phoshate binding barrel
Y11_16581	SSF51366	Ribulose-phoshate binding barrel
Y11_16591	SSF101386	all-alpha NTP pyrophosphatases
Y11_16591	SSF141734	HisI-like
Y11_16601	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_16601	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_16621	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_16631	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_16641	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_16651	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_16681	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_16681	SSF89562	RraA-like
Y11_16701	SSF53098	Ribonuclease H-like
Y11_16711	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_16721	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_16731	SSF51182	RmlC-like cupins
Y11_16741	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_16761	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_16771	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_16781	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_16811	SSF54631	CBS-domain pair
Y11_16811	SSF56176	FAD-binding/transporter-associated domain-like
Y11_16841	SSF51283	dUTPase-like
Y11_16851	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_16861	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_16881	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Y11_16881	SSF50249	Nucleic acid-binding proteins
Y11_16881	SSF52374	Nucleotidylyl transferase
Y11_16881	SSF57770	Methionyl-tRNA synthetase (MetRS), Zn-domain
Y11_16901	SSF53822	Periplasmic binding protein-like I
Y11_16911	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Y11_16921	SSF103473	MFS general substrate transporter
Y11_16951	SSF53927	Cytidine deaminase-like
Y11_16961	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_16961	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Y11_16981	SSF159127	HupF/HypC-like
Y11_17001	SSF54862	4Fe-4S ferredoxins
Y11_17071	SSF143243	Nqo5-like
Y11_17071	SSF56762	HydB/Nqo4-like
Y11_17081	SSF54862	4Fe-4S ferredoxins
Y11_17091	SSF56770	HydA/Nqo6-like
Y11_17111	SSF53163	HybD-like
Y11_17121	SSF54862	4Fe-4S ferredoxins
Y11_17131	SSF50692	ADC-like
Y11_17131	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Y11_17141	SSF46689	Homeodomain-like
Y11_17141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_17141	SSF55781	GAF domain-like
Y11_17161	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_17171	SSF53822	Periplasmic binding protein-like I
Y11_17181	SSF47413	lambda repressor-like DNA-binding domains
Y11_17181	SSF53822	Periplasmic binding protein-like I
Y11_17211	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Y11_17221	SSF103473	MFS general substrate transporter
Y11_17231	SSF46785	"Winged helix" DNA-binding domain
Y11_17231	SSF53850	Periplasmic binding protein-like II
Y11_17241	SSF50129	GroES-like
Y11_17241	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_17251	SSF53474	alpha/beta-Hydrolases
Y11_17291	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_17301	SSF102114	Radical SAM enzymes
Y11_17311	SSF48452	TPR-like
Y11_17321	SSF53218	Molybdenum cofactor biosynthesis proteins
Y11_17321	SSF63867	MoeA C-terminal domain-like
Y11_17321	SSF63882	MoeA N-terminal region -like
Y11_17331	SSF69572	Activating enzymes of the ubiquitin-like proteins
Y11_17361	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_17371	SSF53092	Creatinase/prolidase N-terminal domain
Y11_17371	SSF55920	Creatinase/aminopeptidase
Y11_17381	SSF161111	Cation efflux protein transmembrane domain-like
Y11_17391	SSF53474	alpha/beta-Hydrolases
Y11_17401	SSF56925	OMPA-like
Y11_17411	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_17421	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_17431	SSF82153	FAS1 domain
Y11_17441	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Y11_17441	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Y11_17461	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_17471	SSF47240	Ferritin-like
Y11_17481	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Y11_17501	SSF53850	Periplasmic binding protein-like II
Y11_17511	SSF161098	MetI-like
Y11_17521	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_17531	SSF55785	PYP-like sensor domain (PAS domain)
Y11_17531	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_17551	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_17561	SSF50475	FMN-binding split barrel
Y11_17571	SSF159871	YdgH-like
Y11_17591	SSF55486	Metalloproteases ("zincins"), catalytic domain
Y11_17611	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Y11_17611	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Y11_17621	SSF81338	Aquaporin-like
Y11_17631	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_17651	SSF56935	Porins
Y11_17661	SSF48230	Chondroitin AC/alginate lyase
Y11_17671	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_17691	SSF46785	"Winged helix" DNA-binding domain
Y11_17691	SSF53850	Periplasmic binding protein-like II
Y11_17701	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_17711	SSF53850	Periplasmic binding protein-like II
Y11_17721	SSF161098	MetI-like
Y11_17731	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_17731	SSF54631	CBS-domain pair
Y11_17741	SSF161098	MetI-like
Y11_17751	SSF53850	Periplasmic binding protein-like II
Y11_17771	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_17771	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_17781	SSF52821	Rhodanese/Cell cycle control phosphatase
Y11_17791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_17801	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_17821	SSF48371	ARM repeat
Y11_17831	SSF53822	Periplasmic binding protein-like I
Y11_17851	SSF161098	MetI-like
Y11_17861	SSF161098	MetI-like
Y11_17871	SSF53850	Periplasmic binding protein-like II
Y11_17881	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_17921	SSF55154	CYTH-like phosphatases
Y11_17931	SSF55103	FAD-linked oxidases, C-terminal domain
Y11_17931	SSF56176	FAD-binding/transporter-associated domain-like
Y11_17941	SSF56601	beta-lactamase/transpeptidase-like
Y11_17961	SSF161093	MgtE membrane domain-like
Y11_17961	SSF54631	CBS-domain pair
Y11_17981	SSF51395	FMN-linked oxidoreductases
Y11_17991	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_18001	SSF46689	Homeodomain-like
Y11_18001	SSF48498	Tetracyclin repressor-like, C-terminal domain
Y11_18011	SSF111369	HlyD-like secretion proteins
Y11_18021	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_18061	SSF54690	Molybdopterin synthase subunit MoaE
Y11_18071	SSF54285	MoaD/ThiS
Y11_18081	SSF55040	Molybdenum cofactor biosynthesis protein C, MoaC
Y11_18091	SSF102114	Radical SAM enzymes
Y11_18101	SSF142338	CofD-like
Y11_18121	SSF46600	C-terminal UvrC-binding domain of UvrB
Y11_18121	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_18141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_18151	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_18161	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_18171	SSF53383	PLP-dependent transferases
Y11_18181	SSF102114	Radical SAM enzymes
Y11_18191	SSF53383	PLP-dependent transferases
Y11_18201	SSF50974	Nitrous oxide reductase, N-terminal domain
Y11_18211	SSF56784	HAD-like
Y11_18221	SSF50331	MOP-like
Y11_18221	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_18231	SSF161098	MetI-like
Y11_18241	SSF53850	Periplasmic binding protein-like II
Y11_18251	SSF53850	Periplasmic binding protein-like II
Y11_18271	SSF46785	"Winged helix" DNA-binding domain
Y11_18271	SSF50331	MOP-like
Y11_18291	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_18311	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_18321	SSF54197	HIT-like
Y11_18331	SSF54211	Ribosomal protein S5 domain 2-like
Y11_18331	SSF55060	GHMP Kinase, C-terminal domain
Y11_18341	SSF74650	Galactose mutarotase-like
Y11_18361	SSF52743	Subtilisin-like
Y11_18381	SSF54060	His-Me finger endonucleases
Y11_18401	SSF53254	Phosphoglycerate mutase-like
Y11_18411	SSF51569	Aldolase
Y11_18421	SSF160240	Cation efflux protein cytoplasmic domain-like
Y11_18421	SSF161111	Cation efflux protein transmembrane domain-like
Y11_18441	SSF142754	NadA-like
Y11_18451	SSF48452	TPR-like
Y11_18461	SSF103088	OmpA-like
Y11_18471	SSF52964	TolB, N-terminal domain
Y11_18471	SSF69304	Tricorn protease N-terminal domain
Y11_18481	SSF74653	TolA/TonB C-terminal domain
Y11_18511	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Y11_18561	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Y11_18561	SSF56300	Metallo-dependent phosphatases
Y11_18571	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_18571	SSF52210	Succinyl-CoA synthetase domains
Y11_18581	SSF52210	Succinyl-CoA synthetase domains
Y11_18581	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_18591	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Y11_18591	SSF51230	Single hybrid motif
Y11_18591	SSF52777	CoA-dependent acyltransferases
Y11_18601	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_18611	SSF46548	alpha-helical ferredoxin
Y11_18611	SSF54292	2Fe-2S ferredoxin-like
Y11_18621	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Y11_18621	SSF51905	FAD/NAD(P)-binding domain
Y11_18621	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Y11_18631	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Y11_18641	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Y11_18651	SSF48256	Citrate synthase
Y11_18661	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
Y11_18691	SSF88713	Glycoside hydrolase/deacetylase
Y11_18701	SSF50891	Cyclophilin-like
Y11_18711	SSF160467	PH0987 N-terminal domain-like
Y11_18711	SSF50891	Cyclophilin-like
Y11_18721	SSF102705	NIF3 (NGG1p interacting factor 3)-like
Y11_18731	SSF56281	Metallo-hydrolase/oxidoreductase
Y11_18741	SSF48173	Cryptochrome/photolyase FAD-binding domain
Y11_18741	SSF52425	Cryptochrome/photolyase, N-terminal domain
Y11_18761	SSF51120	beta-Roll
Y11_18811	SSF56784	HAD-like
Y11_18811	SSF81653	Calcium ATPase, transduction domain A
Y11_18811	SSF81665	Calcium ATPase, transmembrane domain M
Y11_18831	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_18831	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_18831	SSF55781	GAF domain-like
Y11_18831	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_18841	SSF52172	CheY-like
Y11_18851	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_18861	SSF51120	beta-Roll
Y11_18871	SSF53738	Phosphoglucomutase, first 3 domains
Y11_18871	SSF55957	Phosphoglucomutase, C-terminal domain
Y11_18881	SSF47598	Ribbon-helix-helix
Y11_18881	SSF82808	Replication modulator SeqA, C-terminal DNA-binding domain
Y11_18891	SSF53474	alpha/beta-Hydrolases
Y11_18911	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_18921	SSF52218	Flavoproteins
Y11_18931	SSF46785	"Winged helix" DNA-binding domain
Y11_18941	SSF49384	Carbohydrate-binding domain
Y11_18941	SSF51445	(Trans)glycosidases
Y11_18941	SSF55545	beta-N-acetylhexosaminidase-like domain
Y11_18941	SSF81296	E set domains
Y11_18971	SSF50715	Ribosomal protein L25-like
Y11_18971	SSF52374	Nucleotidylyl transferase
Y11_18981	SSF51261	Duplicated hybrid motif
Y11_18981	SSF55604	Glucose permease domain IIB
Y11_18991	SSF100950	NagB/RpiA/CoA transferase-like
Y11_19001	SSF51338	Composite domain of metallo-dependent hydrolases
Y11_19001	SSF51556	Metallo-dependent hydrolases
Y11_19011	SSF46785	"Winged helix" DNA-binding domain
Y11_19011	SSF53067	Actin-like ATPase domain
Y11_19031	SSF56784	HAD-like
Y11_19041	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_19041	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Y11_19051	SSF51905	FAD/NAD(P)-binding domain
Y11_19061	SSF102114	Radical SAM enzymes
Y11_19071	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_19081	SSF55486	Metalloproteases ("zincins"), catalytic domain
Y11_19091	SSF54631	CBS-domain pair
Y11_19091	SSF56176	FAD-binding/transporter-associated domain-like
Y11_19101	SSF56317	Carbon-nitrogen hydrolase
Y11_19111	SSF50475	FMN-binding split barrel
Y11_19121	SSF53850	Periplasmic binding protein-like II
Y11_19131	SSF161098	MetI-like
Y11_19141	SSF161098	MetI-like
Y11_19151	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_19181	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Y11_19181	SSF50677	ValRS/IleRS/LeuRS editing domain
Y11_19181	SSF52374	Nucleotidylyl transferase
Y11_19201	SSF48019	post-AAA+ oligomerization domain-like
Y11_19201	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_19211	SSF52374	Nucleotidylyl transferase
Y11_19221	SSF81301	Nucleotidyltransferase
Y11_19231	SSF75217	alpha/beta knot
Y11_19241	SSF56519	Penicillin binding protein dimerisation domain
Y11_19241	SSF56601	beta-lactamase/transpeptidase-like
Y11_19261	SSF110997	Sporulation related repeat
Y11_19261	SSF50685	Barwin-like endoglucanases
Y11_19271	SSF56601	beta-lactamase/transpeptidase-like
Y11_19271	SSF69189	Penicillin-binding protein associated domain
Y11_19281	SSF117991	YbeD/HP0495-like
Y11_19291	SSF55681	Class II aaRS and biotin synthetases
Y11_19301	SSF102114	Radical SAM enzymes
Y11_19321	SSF55073	Nucleotide cyclase
Y11_19341	SSF50249	Nucleic acid-binding proteins
Y11_19351	SSF50249	Nucleic acid-binding proteins
Y11_19361	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_19381	SSF56300	Metallo-dependent phosphatases
Y11_19391	SSF46575	DNA polymerase III theta subunit-like
Y11_19401	SSF54909	Dimeric alpha+beta barrel
Y11_19411	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_19411	SSF90123	ABC transporter transmembrane region
Y11_19431	SSF143968	UbiD C-terminal domain-like
Y11_19431	SSF50475	FMN-binding split barrel
Y11_19441	SSF48557	L-aspartase-like
Y11_19451	SSF51197	Clavaminate synthase-like
Y11_19461	SSF53850	Periplasmic binding protein-like II
Y11_19581	SSF46785	"Winged helix" DNA-binding domain
Y11_19581	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_19581	SSF57783	Zinc beta-ribbon
Y11_19641	SSF56349	DNA breaking-rejoining enzymes
Y11_19651	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_19651	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Y11_19661	SSF55174	Alpha-L RNA-binding motif
Y11_19671	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Y11_19671	SSF52374	Nucleotidylyl transferase
Y11_19681	SSF50891	Cyclophilin-like
Y11_19691	SSF56300	Metallo-dependent phosphatases
Y11_19701	SSF52255	N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
Y11_19711	SSF51246	Rudiment single hybrid motif
Y11_19711	SSF52440	PreATP-grasp domain
Y11_19711	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_19741	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_19751	SSF52266	SGNH hydrolase
Y11_19761	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_19771	SSF48452	TPR-like
Y11_19771	SSF52833	Thioredoxin-like
Y11_19781	SSF117892	Band 7/SPFH domain
Y11_19791	SSF141322	NfeD domain-like
Y11_19801	SSF46955	Putative DNA-binding domain
Y11_19811	SSF55008	HMA, heavy metal-associated domain
Y11_19811	SSF56784	HAD-like
Y11_19811	SSF81653	Calcium ATPase, transduction domain A
Y11_19811	SSF81665	Calcium ATPase, transmembrane domain M
Y11_19831	SSF55826	YbaK/ProRS associated domain
Y11_19841	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Y11_19841	SSF56300	Metallo-dependent phosphatases
Y11_19861	SSF103473	MFS general substrate transporter
Y11_19891	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_19901	SSF53613	Ribokinase-like
Y11_19911	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_19921	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_19931	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_19931	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_19951	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_19961	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_19971	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_19981	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_20001	SSF53800	Chelatase
Y11_20011	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_20031	SSF110942	HSP90 C-terminal domain
Y11_20031	SSF54211	Ribosomal protein S5 domain 2-like
Y11_20031	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_20041	SSF111304	Recombination protein RecR
Y11_20051	SSF82607	YbaB-like
Y11_20061	SSF48019	post-AAA+ oligomerization domain-like
Y11_20061	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_20071	SSF53271	PRTase-like
Y11_20111	SSF50182	Sm-like ribonucleoproteins
Y11_20111	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Y11_20111	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Y11_20121	SSF75169	DsrEFH-like
Y11_20131	SSF46689	Homeodomain-like
Y11_20131	SSF48498	Tetracyclin repressor-like, C-terminal domain
Y11_20141	SSF111369	HlyD-like secretion proteins
Y11_20151	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Y11_20151	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Y11_20151	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Y11_20201	SSF63520	PTS-regulatory domain, PRD
Y11_20211	SSF51419	PLP-binding barrel
Y11_20221	SSF53649	Alkaline phosphatase-like
Y11_20251	SSF143800	L28p-like
Y11_20261	SSF57840	Ribosomal protein L36
Y11_20271	SSF53807	"Helical backbone" metal receptor
Y11_20281	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Y11_20291	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_20331	SSF68989	Hemolysin expression modulating protein HHA
Y11_20351	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Y11_20371	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Y11_20381	SSF111352	Ammonium transporter
Y11_20391	SSF54913	GlnB-like
Y11_20401	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_20401	SSF90123	ABC transporter transmembrane region
Y11_20411	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_20411	SSF90123	ABC transporter transmembrane region
Y11_20421	SSF46785	"Winged helix" DNA-binding domain
Y11_20421	SSF54909	Dimeric alpha+beta barrel
Y11_20431	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_20441	SSF56784	HAD-like
Y11_20451	SSF53850	Periplasmic binding protein-like II
Y11_20461	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_20471	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Y11_20481	SSF47781	RuvA domain 2-like
Y11_20491	SSF109998	Triger factor/SurA peptide-binding domain-like
Y11_20491	SSF54534	FKBP-like
Y11_20511	SSF47729	IHF-like DNA-binding proteins
Y11_20521	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_20521	SSF54211	Ribosomal protein S5 domain 2-like
Y11_20521	SSF88697	PUA domain-like
Y11_20541	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_20541	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Y11_20551	SSF52096	ClpP/crotonase
Y11_20561	SSF102735	Trigger factor ribosome-binding domain
Y11_20561	SSF109998	Triger factor/SurA peptide-binding domain-like
Y11_20561	SSF54534	FKBP-like
Y11_20571	SSF82657	BolA-like
Y11_20591	SSF103473	MFS general substrate transporter
Y11_20601	SSF111364	Tsx-like channel
Y11_20611	SSF49503	Cupredoxins
Y11_20611	SSF81464	Cytochrome c oxidase subunit II-like, transmembrane region
Y11_20621	SSF81442	Cytochrome c oxidase subunit I-like
Y11_20631	SSF81452	Cytochrome c oxidase subunit III-like
Y11_20661	SSF103473	MFS general substrate transporter
Y11_20671	SSF89963	YajQ-like
Y11_20681	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_20681	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_20691	SSF52317	Class I glutamine amidotransferase-like
Y11_20701	SSF143437	THUMP domain-like
Y11_20701	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_20701	SSF52821	Rhodanese/Cell cycle control phosphatase
Y11_20711	SSF116842	XseB-like
Y11_20721	SSF48576	Terpenoid synthases
Y11_20731	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_20731	SSF52922	TK C-terminal domain-like
Y11_20751	SSF101307	YutG-like
Y11_20761	SSF55326	PurM N-terminal domain-like
Y11_20761	SSF56042	PurM C-terminal domain-like
Y11_20771	SSF48013	NusB-like
Y11_20781	SSF52121	Lumazine synthase
Y11_20791	SSF53597	Dihydrofolate reductase-like
Y11_20791	SSF53927	Cytidine deaminase-like
Y11_20841	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Y11_20851	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Y11_20871	SSF51713	tRNA-guanine transglycosylase
Y11_20901	SSF53474	alpha/beta-Hydrolases
Y11_20911	SSF111337	QueA-like
Y11_20941	SSF52833	Thioredoxin-like
Y11_20961	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Y11_20971	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_20981	SSF51011	Glycosyl hydrolase domain
Y11_20981	SSF51445	(Trans)glycosidases
Y11_21011	SSF53850	Periplasmic binding protein-like II
Y11_21021	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_21021	SSF55785	PYP-like sensor domain (PAS domain)
Y11_21021	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_21031	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_21031	SSF52172	CheY-like
Y11_21041	SSF56300	Metallo-dependent phosphatases
Y11_21051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_21061	SSF53067	Actin-like ATPase domain
Y11_21081	SSF51182	RmlC-like cupins
Y11_21101	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_21111	SSF56935	Porins
Y11_21121	SSF53807	"Helical backbone" metal receptor
Y11_21151	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_21161	SSF159871	YdgH-like
Y11_21171	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_21181	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_21211	SSF48208	Six-hairpin glycosidases
Y11_21211	SSF74650	Galactose mutarotase-like
Y11_21231	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_21231	SSF56327	LDH C-terminal domain-like
Y11_21241	SSF55604	Glucose permease domain IIB
Y11_21251	SSF46785	"Winged helix" DNA-binding domain
Y11_21251	SSF64288	Chorismate lyase-like
Y11_21261	SSF53720	ALDH-like
Y11_21271	SSF53633	Carbamate kinase-like
Y11_21271	SSF88697	PUA domain-like
Y11_21291	SSF53474	alpha/beta-Hydrolases
Y11_21301	SSF53271	PRTase-like
Y11_21321	SSF53187	Zn-dependent exopeptidases
Y11_21331	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
Y11_21331	SSF56672	DNA/RNA polymerases
Y11_21341	SSF55298	YjgF-like
Y11_21351	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_21371	SSF52440	PreATP-grasp domain
Y11_21371	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_21381	SSF51695	PLC-like phosphodiesterases
Y11_21401	SSF143631	ApbE-like
Y11_21411	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Y11_21411	SSF54292	2Fe-2S ferredoxin-like
Y11_21411	SSF63380	Riboflavin synthase domain-like
Y11_21471	SSF141523	L,D-transpeptidase catalytic domain-like
Y11_21481	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Y11_21491	SSF53697	SIS domain
Y11_21501	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Y11_21501	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Y11_21511	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_21531	SSF51126	Pectin lyase-like
Y11_21561	SSF56112	Protein kinase-like (PK-like)
Y11_21581	SSF100950	NagB/RpiA/CoA transferase-like
Y11_21591	SSF51182	RmlC-like cupins
Y11_21601	SSF56784	HAD-like
Y11_21611	SSF53639	AraD/HMP-PK domain-like
Y11_21621	SSF53383	PLP-dependent transferases
Y11_21631	SSF56317	Carbon-nitrogen hydrolase
Y11_21641	SSF53187	Zn-dependent exopeptidases
Y11_21641	SSF55031	Bacterial exopeptidase dimerisation domain
Y11_21651	SSF53383	PLP-dependent transferases
Y11_21661	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_21671	SSF161098	MetI-like
Y11_21681	SSF161098	MetI-like
Y11_21691	SSF53850	Periplasmic binding protein-like II
Y11_21701	SSF46689	Homeodomain-like
Y11_21701	SSF53697	SIS domain
Y11_21711	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Y11_21731	SSF75304	Amidase signature (AS) enzymes
Y11_21741	SSF54427	NTF2-like
Y11_21761	SSF103473	MFS general substrate transporter
Y11_21791	SSF46785	"Winged helix" DNA-binding domain
Y11_21801	SSF56954	Outer membrane efflux proteins (OEP)
Y11_21811	SSF111369	HlyD-like secretion proteins
Y11_21821	SSF103473	MFS general substrate transporter
Y11_21841	SSF55315	L30e-like
Y11_21841	SSF75217	alpha/beta knot
Y11_21851	SSF52833	Thioredoxin-like
Y11_21871	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_21871	SSF52210	Succinyl-CoA synthetase domains
Y11_21871	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_21871	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_21881	SSF56024	Phospholipase D/nuclease
Y11_21901	SSF69754	Ribosome binding protein Y (YfiA homologue)
Y11_21911	SSF48452	TPR-like
Y11_21921	SSF55120	Pseudouridine synthase
Y11_21921	SSF55174	Alpha-L RNA-binding motif
Y11_21931	SSF64438	CNF1/YfiH-like putative cysteine hydrolases
Y11_21941	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_21941	SSF81923	Double Clp-N motif
Y11_21981	SSF48600	Chorismate mutase II
Y11_21981	SSF53850	Periplasmic binding protein-like II
Y11_21981	SSF55021	ACT-like
Y11_21991	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_21991	SSF48600	Chorismate mutase II
Y11_21991	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_22001	SSF51569	Aldolase
Y11_22011	SSF52172	CheY-like
Y11_22041	SSF50104	Translation proteins SH3-like domain
Y11_22051	SSF75217	alpha/beta knot
Y11_22061	SSF50346	PRC-barrel domain
Y11_22061	SSF50447	Translation proteins
Y11_22071	SSF54565	Ribosomal protein S16
Y11_22081	SSF47446	Signal peptide-binding domain
Y11_22081	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_22101	SSF54631	CBS-domain pair
Y11_22101	SSF56176	FAD-binding/transporter-associated domain-like
Y11_22111	SSF63411	LuxS/MPP-like metallohydrolase
Y11_22121	SSF55931	Glutamine synthetase/guanido kinase
Y11_22141	SSF56784	HAD-like
Y11_22151	SSF117130	CsrA-like
Y11_22161	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
Y11_22161	SSF50447	Translation proteins
Y11_22161	SSF55186	ThrRS/AlaRS common domain
Y11_22161	SSF55681	Class II aaRS and biotin synthetases
Y11_22181	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_22181	SSF54752	RecA protein, C-terminal domain
Y11_22191	SSF142433	CinA-like
Y11_22201	SSF103473	MFS general substrate transporter
Y11_22231	SSF89155	TorD-like
Y11_22251	SSF54862	4Fe-4S ferredoxins
Y11_22261	SSF50692	ADC-like
Y11_22261	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Y11_22271	SSF117457	FumA C-terminal domain-like
Y11_22281	SSF53822	Periplasmic binding protein-like I
Y11_22311	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_22321	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_22331	SSF141130	Acetamidase/Formamidase-like
Y11_22341	SSF53822	Periplasmic binding protein-like I
Y11_22351	SSF52172	CheY-like
Y11_22361	SSF56317	Carbon-nitrogen hydrolase
Y11_22371	SSF100950	NagB/RpiA/CoA transferase-like
Y11_22371	SSF46785	"Winged helix" DNA-binding domain
Y11_22381	SSF53062	PTS system fructose IIA component-like
Y11_22391	SSF52728	PTS IIb component
Y11_22421	SSF50129	GroES-like
Y11_22421	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_22431	SSF46785	"Winged helix" DNA-binding domain
Y11_22441	SSF50447	Translation proteins
Y11_22441	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_22441	SSF54211	Ribosomal protein S5 domain 2-like
Y11_22441	SSF54980	EF-G C-terminal domain-like
Y11_22461	SSF51182	RmlC-like cupins
Y11_22471	SSF46626	Cytochrome c
Y11_22481	SSF53383	PLP-dependent transferases
Y11_22501	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_22511	SSF47336	ACP-like
Y11_22521	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Y11_22531	SSF53901	Thiolase-like
Y11_22541	SSF56954	Outer membrane efflux proteins (OEP)
Y11_22551	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_22561	SSF111369	HlyD-like secretion proteins
Y11_22571	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_22571	SSF90123	ABC transporter transmembrane region
Y11_22591	SSF52833	Thioredoxin-like
Y11_22611	SSF49401	Bacterial adhesins
Y11_22621	SSF49401	Bacterial adhesins
Y11_22631	SSF49401	Bacterial adhesins
Y11_22641	SSF49354	PapD-like
Y11_22641	SSF49584	Periplasmic chaperone C-domain
Y11_22651	SSF141729	FimD N-terminal domain-like
Y11_22661	SSF49401	Bacterial adhesins
Y11_22671	SSF49401	Bacterial adhesins
Y11_22691	SSF49401	Bacterial adhesins
Y11_22731	SSF48334	DNA repair protein MutS, domain III
Y11_22731	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_22731	SSF53150	DNA repair protein MutS, domain II
Y11_22731	SSF55271	DNA repair protein MutS, domain I
Y11_22741	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Y11_22741	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Y11_22751	SSF51261	Duplicated hybrid motif
Y11_22761	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_22771	SSF64167	SurE-like
Y11_22781	SSF55120	Pseudouridine synthase
Y11_22791	SSF69765	IpsF-like
Y11_22801	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_22831	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_22841	SSF50447	Translation proteins
Y11_22841	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Y11_22841	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_22851	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_22861	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_22861	SSF53790	Tetrapyrrole methylase
Y11_22861	SSF75615	Siroheme synthase middle domains-like
Y11_22871	SSF53187	Zn-dependent exopeptidases
Y11_22881	SSF54786	YcfA/nrd intein domain
Y11_22891	SSF143100	TTHA1013/TTHA0281-like
Y11_22901	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_22911	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
Y11_22911	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Y11_22921	SSF52218	Flavoproteins
Y11_22921	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Y11_22921	SSF63380	Riboflavin synthase domain-like
Y11_22931	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Y11_22971	SSF102114	Radical SAM enzymes
Y11_22981	SSF49329	Cu,Zn superoxide dismutase-like
Y11_23031	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_23031	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Y11_23031	SSF55021	ACT-like
Y11_23041	SSF100950	NagB/RpiA/CoA transferase-like
Y11_23041	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
Y11_23051	SSF46785	"Winged helix" DNA-binding domain
Y11_23051	SSF53850	Periplasmic binding protein-like II
Y11_23111	SSF50182	Sm-like ribonucleoproteins
Y11_23111	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Y11_23111	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Y11_23121	SSF52799	(Phosphotyrosine protein) phosphatases II
Y11_23131	SSF51569	Aldolase
Y11_23141	SSF53748	Phosphoglycerate kinase
Y11_23151	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_23151	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_23161	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_23161	SSF52922	TK C-terminal domain-like
Y11_23181	SSF50022	ISP domain
Y11_23201	SSF50621	Alanine racemase C-terminal domain-like
Y11_23201	SSF51419	PLP-binding barrel
Y11_23221	SSF55973	S-adenosylmethionine synthetase
Y11_23251	SSF46785	"Winged helix" DNA-binding domain
Y11_23271	SSF54060	His-Me finger endonucleases
Y11_23281	SSF75217	alpha/beta knot
Y11_23281	SSF88697	PUA domain-like
Y11_23291	SSF52440	PreATP-grasp domain
Y11_23291	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_23301	SSF143456	VC0467-like
Y11_23311	SSF53098	Ribonuclease H-like
Y11_23321	SSF56317	Carbon-nitrogen hydrolase
Y11_23331	SSF55909	Pentein
Y11_23341	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_23351	SSF51419	PLP-binding barrel
Y11_23361	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_23361	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_23381	SSF69786	YggU-like
Y11_23391	SSF52972	ITPase-like
Y11_23401	SSF102114	Radical SAM enzymes
Y11_23421	SSF56601	beta-lactamase/transpeptidase-like
Y11_23441	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_23451	SSF48150	DNA-glycosylase
Y11_23451	SSF55811	Nudix
Y11_23461	SSF111148	YggX-like
Y11_23471	SSF53955	Lysozyme-like
Y11_23491	SSF52172	CheY-like
Y11_23491	SSF53383	PLP-dependent transferases
Y11_23491	SSF55904	Ornithine decarboxylase C-terminal domain
Y11_23521	SSF56349	DNA breaking-rejoining enzymes
Y11_23541	SSF46785	"Winged helix" DNA-binding domain
Y11_23571	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Y11_23611	SSF52172	CheY-like
Y11_23611	SSF53383	PLP-dependent transferases
Y11_23611	SSF55904	Ornithine decarboxylase C-terminal domain
Y11_23621	SSF56954	Outer membrane efflux proteins (OEP)
Y11_23641	SSF111369	HlyD-like secretion proteins
Y11_23661	SSF51338	Composite domain of metallo-dependent hydrolases
Y11_23661	SSF51556	Metallo-dependent hydrolases
Y11_23681	SSF55920	Creatinase/aminopeptidase
Y11_23691	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_23701	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Y11_23721	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Y11_23731	SSF53807	"Helical backbone" metal receptor
Y11_23741	SSF46785	"Winged helix" DNA-binding domain
Y11_23741	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_23751	SSF46785	"Winged helix" DNA-binding domain
Y11_23751	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_23761	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_23771	SSF46785	"Winged helix" DNA-binding domain
Y11_23771	SSF53383	PLP-dependent transferases
Y11_23801	SSF103473	MFS general substrate transporter
Y11_23811	SSF47413	lambda repressor-like DNA-binding domains
Y11_23811	SSF53822	Periplasmic binding protein-like I
Y11_23821	SSF53590	Nucleoside hydrolase
Y11_23831	SSF109755	PhoU-like
Y11_23841	SSF52499	Isochorismatase-like hydrolases
Y11_23861	SSF103473	MFS general substrate transporter
Y11_23861	SSF103661	Proline/betaine transporter ProP, C-terminal cytoplasmic domain
Y11_23871	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Y11_23881	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Y11_23881	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Y11_23881	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Y11_23891	SSF111369	HlyD-like secretion proteins
Y11_23901	SSF141868	EAL domain-like
Y11_23901	SSF55073	Nucleotide cyclase
Y11_23901	SSF55785	PYP-like sensor domain (PAS domain)
Y11_23921	SSF53613	Ribokinase-like
Y11_23931	SSF140931	Fic-like
Y11_23931	SSF46785	"Winged helix" DNA-binding domain
Y11_23941	SSF53067	Actin-like ATPase domain
Y11_23941	SSF54975	Acylphosphatase/BLUF domain-like
Y11_23941	SSF55821	YrdC/RibB
Y11_23951	SSF55326	PurM N-terminal domain-like
Y11_23951	SSF56042	PurM C-terminal domain-like
Y11_23971	SSF159127	HupF/HypC-like
Y11_23981	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_24011	SSF53163	HybD-like
Y11_24021	SSF56762	HydB/Nqo4-like
Y11_24041	SSF54862	4Fe-4S ferredoxins
Y11_24051	SSF56770	HydA/Nqo6-like
Y11_24071	SSF103088	OmpA-like
Y11_24091	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Y11_24091	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Y11_24131	SSF101116	Flagellar export chaperone FliS
Y11_24161	SSF64518	Phase 1 flagellin
Y11_24191	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_24231	SSF64518	Phase 1 flagellin
Y11_24241	SSF64518	Phase 1 flagellin
Y11_24291	SSF117143	Flagellar hook protein flgE
Y11_24301	SSF117143	Flagellar hook protein flgE
Y11_24311	SSF117143	Flagellar hook protein flgE
Y11_24361	SSF101498	Anti-sigma factor FlgM
Y11_24371	SSF140566	FlgN-like
Y11_24391	SSF46689	Homeodomain-like
Y11_24401	SSF53098	Ribonuclease H-like
Y11_24421	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_24431	SSF56954	Outer membrane efflux proteins (OEP)
Y11_24481	SSF46689	Homeodomain-like
Y11_24511	SSF56317	Carbon-nitrogen hydrolase
Y11_24541	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Y11_24551	SSF51197	Clavaminate synthase-like
Y11_24561	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_24621	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_24641	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_24671	SSF48452	TPR-like
Y11_24701	SSF53300	vWA-like
Y11_24731	SSF53383	PLP-dependent transferases
Y11_24751	SSF46689	Homeodomain-like
Y11_24761	SSF56796	Dehydroquinate synthase-like
Y11_24771	SSF51430	NAD(P)-linked oxidoreductase
Y11_24781	SSF102114	Radical SAM enzymes
Y11_24791	SSF49503	Cupredoxins
Y11_24801	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Y11_24811	SSF101904	GyrA/ParC C-terminal domain-like
Y11_24811	SSF56719	Type II DNA topoisomerase
Y11_24821	SSF52218	Flavoproteins
Y11_24831	SSF54909	Dimeric alpha+beta barrel
Y11_24841	SSF46785	"Winged helix" DNA-binding domain
Y11_24841	SSF53850	Periplasmic binding protein-like II
Y11_24851	SSF54211	Ribosomal protein S5 domain 2-like
Y11_24851	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_24851	SSF56719	Type II DNA topoisomerase
Y11_24861	SSF53474	alpha/beta-Hydrolases
Y11_24871	SSF56300	Metallo-dependent phosphatases
Y11_24891	SSF55811	Nudix
Y11_24901	SSF56954	Outer membrane efflux proteins (OEP)
Y11_24931	SSF52440	PreATP-grasp domain
Y11_24931	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_24941	SSF53213	LigB-like
Y11_24951	SSF55821	YrdC/RibB
Y11_24981	SSF52374	Nucleotidylyl transferase
Y11_24981	SSF53613	Ribokinase-like
Y11_24991	SSF81301	Nucleotidyltransferase
Y11_24991	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Y11_25001	SSF55154	CYTH-like phosphatases
Y11_25021	SSF81301	Nucleotidyltransferase
Y11_25021	SSF81891	Poly A polymerase C-terminal region-like
Y11_25041	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Y11_25061	SSF53067	Actin-like ATPase domain
Y11_25091	SSF117023	DNA primase DnaG, C-terminal domain
Y11_25091	SSF56731	DNA primase core
Y11_25101	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Y11_25101	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Y11_25141	SSF69279	Phage tail proteins
Y11_25261	SSF160719	gpW/gp25-like
Y11_25281	SSF56672	DNA/RNA polymerases
Y11_25291	SSF47413	lambda repressor-like DNA-binding domains
Y11_25341	SSF53955	Lysozyme-like
Y11_25551	SSF56349	DNA breaking-rejoining enzymes
Y11_25571	SSF56935	Porins
Y11_25581	SSF51445	(Trans)glycosidases
Y11_25601	SSF46689	Homeodomain-like
Y11_25601	SSF53697	SIS domain
Y11_25611	SSF53697	SIS domain
Y11_25621	SSF55604	Glucose permease domain IIB
Y11_25631	SSF56601	beta-lactamase/transpeptidase-like
Y11_25651	SSF53383	PLP-dependent transferases
Y11_25661	SSF53383	PLP-dependent transferases
Y11_25691	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_25701	SSF51395	FMN-linked oxidoreductases
Y11_25701	SSF51905	FAD/NAD(P)-binding domain
Y11_25701	SSF51971	Nucleotide-binding domain
Y11_25731	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_25741	SSF103515	Autotransporter
Y11_25741	SSF51126	Pectin lyase-like
Y11_25751	SSF103515	Autotransporter
Y11_25781	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_25781	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_25801	SSF118215	Proton glutamate symport protein
Y11_25831	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_25831	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_25841	SSF51556	Metallo-dependent hydrolases
Y11_25861	SSF103473	MFS general substrate transporter
Y11_25871	SSF46785	"Winged helix" DNA-binding domain
Y11_25871	SSF48008	GntR ligand-binding domain-like
Y11_25971	SSF47616	GST C-terminal domain-like
Y11_25971	SSF52833	Thioredoxin-like
Y11_25981	SSF46785	"Winged helix" DNA-binding domain
Y11_25981	SSF53850	Periplasmic binding protein-like II
Y11_25991	SSF51182	RmlC-like cupins
Y11_26011	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_26021	SSF50129	GroES-like
Y11_26031	SSF51430	NAD(P)-linked oxidoreductase
Y11_26041	SSF46785	"Winged helix" DNA-binding domain
Y11_26041	SSF53850	Periplasmic binding protein-like II
Y11_26051	SSF49401	Bacterial adhesins
Y11_26061	SSF141729	FimD N-terminal domain-like
Y11_26071	SSF49354	PapD-like
Y11_26071	SSF49584	Periplasmic chaperone C-domain
Y11_26081	SSF49401	Bacterial adhesins
Y11_26101	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_26111	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_26121	SSF53098	Ribonuclease H-like
Y11_26151	SSF53790	Tetrapyrrole methylase
Y11_26161	SSF53822	Periplasmic binding protein-like I
Y11_26171	SSF52980	Restriction endonuclease-like
Y11_26181	SSF53697	SIS domain
Y11_26211	SSF53955	Lysozyme-like
Y11_26221	SSF52317	Class I glutamine amidotransferase-like
Y11_26231	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Y11_26231	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_26231	SSF52172	CheY-like
Y11_26231	SSF55785	PYP-like sensor domain (PAS domain)
Y11_26231	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_26241	SSF102114	Radical SAM enzymes
Y11_26251	SSF51395	FMN-linked oxidoreductases
Y11_26251	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Y11_26251	SSF69336	Alpha subunit of glutamate synthase, C-terminal domain
Y11_26261	SSF46548	alpha-helical ferredoxin
Y11_26261	SSF51971	Nucleotide-binding domain
Y11_26281	SSF101738	SspB-like
Y11_26291	SSF47616	GST C-terminal domain-like
Y11_26291	SSF52833	Thioredoxin-like
Y11_26311	SSF54211	Ribosomal protein S5 domain 2-like
Y11_26321	SSF52161	Ribosomal protein L13
Y11_26331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_26351	SSF50156	PDZ domain-like
Y11_26351	SSF50494	Trypsin-like serine proteases
Y11_26361	SSF50156	PDZ domain-like
Y11_26361	SSF50494	Trypsin-like serine proteases
Y11_26371	SSF55205	EPT/RTPC-like
Y11_26381	SSF82657	BolA-like
Y11_26391	SSF52091	SpoIIaa-like
Y11_26431	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_26451	SSF53697	SIS domain
Y11_26461	SSF56784	HAD-like
Y11_26491	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_26511	SSF69754	Ribosome binding protein Y (YfiA homologue)
Y11_26521	SSF55804	Phoshotransferase/anion transport protein
Y11_26531	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_26541	SSF55594	HPr-like
Y11_26561	SSF53671	Aspartate/ornithine carbamoyltransferase
Y11_26571	SSF54893	Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
Y11_26571	SSF57825	Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
Y11_26581	SSF55298	YjgF-like
Y11_26601	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_26621	SSF54001	Cysteine proteinases
Y11_26631	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Y11_26641	SSF51011	Glycosyl hydrolase domain
Y11_26641	SSF51445	(Trans)glycosidases
Y11_26651	SSF55604	Glucose permease domain IIB
Y11_26661	SSF47413	lambda repressor-like DNA-binding domains
Y11_26661	SSF53822	Periplasmic binding protein-like I
Y11_26671	SSF56784	HAD-like
Y11_26671	SSF81653	Calcium ATPase, transduction domain A
Y11_26671	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Y11_26671	SSF81665	Calcium ATPase, transmembrane domain M
Y11_26691	SSF47413	lambda repressor-like DNA-binding domains
Y11_26701	SSF52794	PTS system IIB component-like
Y11_26701	SSF55804	Phoshotransferase/anion transport protein
Y11_26701	SSF63520	PTS-regulatory domain, PRD
Y11_26711	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
Y11_26741	SSF53383	PLP-dependent transferases
Y11_26751	SSF51338	Composite domain of metallo-dependent hydrolases
Y11_26751	SSF51556	Metallo-dependent hydrolases
Y11_26801	SSF63520	PTS-regulatory domain, PRD
Y11_26821	SSF54534	FKBP-like
Y11_26831	SSF47175	Cytochromes
Y11_26851	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
Y11_26861	SSF158710	PSPTO4464-like
Y11_26871	SSF52038	Barstar-related
Y11_26881	SSF53933	Microbial ribonucleases
Y11_26891	SSF53720	ALDH-like
Y11_26911	SSF111369	HlyD-like secretion proteins
Y11_26931	SSF46785	"Winged helix" DNA-binding domain
Y11_26931	SSF53850	Periplasmic binding protein-like II
Y11_26941	SSF46785	"Winged helix" DNA-binding domain
Y11_26981	SSF69318	Integrin alpha N-terminal domain
Y11_27011	SSF55166	Hedgehog/DD-peptidase
Y11_27041	SSF56399	ADP-ribosylation
Y11_27051	SSF47413	lambda repressor-like DNA-binding domains
Y11_27071	SSF111283	Putative modulator of DNA gyrase, PmbA/TldD
Y11_27081	SSF56317	Carbon-nitrogen hydrolase
Y11_27101	SSF50249	Nucleic acid-binding proteins
Y11_27111	SSF52972	ITPase-like
Y11_27141	SSF53067	Actin-like ATPase domain
Y11_27151	SSF141868	EAL domain-like
Y11_27151	SSF55073	Nucleotide cyclase
Y11_27161	SSF50129	GroES-like
Y11_27161	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_27171	SSF56524	Oxidoreductase molybdopterin-binding domain
Y11_27191	SSF52304	Type II 3-dehydroquinate dehydratase
Y11_27201	SSF51230	Single hybrid motif
Y11_27211	SSF51246	Rudiment single hybrid motif
Y11_27211	SSF52440	PreATP-grasp domain
Y11_27211	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_27241	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_27251	SSF51395	FMN-linked oxidoreductases
Y11_27261	SSF46689	Homeodomain-like
Y11_27271	SSF103190	Sensory domain-like
Y11_27271	SSF55073	Nucleotide cyclase
Y11_27291	SSF50249	Nucleic acid-binding proteins
Y11_27301	SSF50249	Nucleic acid-binding proteins
Y11_27361	SSF53474	alpha/beta-Hydrolases
Y11_27371	SSF53850	Periplasmic binding protein-like II
Y11_27381	SSF161098	MetI-like
Y11_27391	SSF161098	MetI-like
Y11_27401	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_27431	SSF46785	"Winged helix" DNA-binding domain
Y11_27431	SSF53850	Periplasmic binding protein-like II
Y11_27461	SSF47616	GST C-terminal domain-like
Y11_27461	SSF52833	Thioredoxin-like
Y11_27471	SSF47413	lambda repressor-like DNA-binding domains
Y11_27491	SSF50249	Nucleic acid-binding proteins
Y11_27501	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_27511	SSF142906	YjbR-like
Y11_27521	SSF53383	PLP-dependent transferases
Y11_27531	SSF50621	Alanine racemase C-terminal domain-like
Y11_27531	SSF51419	PLP-binding barrel
Y11_27541	SSF48024	N-terminal domain of DnaB helicase
Y11_27541	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_27551	SSF50129	GroES-like
Y11_27551	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_27581	SSF51395	FMN-linked oxidoreductases
Y11_27601	SSF46785	"Winged helix" DNA-binding domain
Y11_27621	SSF69047	Hypothetical protein YjbJ
Y11_27631	SSF46785	"Winged helix" DNA-binding domain
Y11_27631	SSF51306	LexA/Signal peptidase
Y11_27651	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Y11_27671	SSF64288	Chorismate lyase-like
Y11_27681	SSF56112	Protein kinase-like (PK-like)
Y11_27701	SSF56935	Porins
Y11_27711	SSF50331	MOP-like
Y11_27711	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_27721	SSF53850	Periplasmic binding protein-like II
Y11_27731	SSF160964	MalF N-terminal region-like
Y11_27731	SSF161098	MetI-like
Y11_27741	SSF161098	MetI-like
Y11_27761	SSF53697	SIS domain
Y11_27771	SSF53633	Carbamate kinase-like
Y11_27771	SSF55021	ACT-like
Y11_27801	SSF51126	Pectin lyase-like
Y11_27811	SSF47644	Methionine synthase domain
Y11_27811	SSF51717	Dihydropteroate synthetase-like
Y11_27811	SSF52242	Cobalamin (vitamin B12)-binding domain
Y11_27811	SSF56507	Methionine synthase activation domain-like
Y11_27811	SSF82282	Homocysteine S-methyltransferase
Y11_27821	SSF46785	"Winged helix" DNA-binding domain
Y11_27821	SSF55781	GAF domain-like
Y11_27841	SSF51621	Phosphoenolpyruvate/pyruvate domain
Y11_27851	SSF51645	Malate synthase G
Y11_27861	SSF52317	Class I glutamine amidotransferase-like
Y11_27881	SSF48295	TrpR-like
Y11_27891	SSF53681	Aspartate/glutamate racemase
Y11_27901	SSF56935	Porins
Y11_27911	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_27931	SSF46689	Homeodomain-like
Y11_27941	SSF51905	FAD/NAD(P)-binding domain
Y11_27941	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Y11_27951	SSF46785	"Winged helix" DNA-binding domain
Y11_27951	SSF53850	Periplasmic binding protein-like II
Y11_27961	SSF52833	Thioredoxin-like
Y11_27971	SSF51905	FAD/NAD(P)-binding domain
Y11_27971	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Y11_27981	SSF74653	TolA/TonB C-terminal domain
Y11_27991	SSF111369	HlyD-like secretion proteins
Y11_28001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_28001	SSF90123	ABC transporter transmembrane region
Y11_28011	SSF54621	Heme-binding protein A (HasA)
Y11_28021	SSF54621	Heme-binding protein A (HasA)
Y11_28031	SSF54621	Heme-binding protein A (HasA)
Y11_28041	SSF54621	Heme-binding protein A (HasA)
Y11_28051	SSF56935	Porins
Y11_28061	SSF48557	L-aspartase-like
Y11_28081	SSF53633	Carbamate kinase-like
Y11_28091	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_28091	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_28101	SSF53187	Zn-dependent exopeptidases
Y11_28101	SSF55031	Bacterial exopeptidase dimerisation domain
Y11_28121	SSF51621	Phosphoenolpyruvate/pyruvate domain
Y11_28131	SSF51730	FAD-linked oxidoreductase
Y11_28141	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_28141	SSF53633	Carbamate kinase-like
Y11_28141	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_28151	SSF53383	PLP-dependent transferases
Y11_28161	SSF47598	Ribbon-helix-helix
Y11_28171	SSF143800	L28p-like
Y11_28181	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_28191	SSF47413	lambda repressor-like DNA-binding domains
Y11_28191	SSF53822	Periplasmic binding protein-like I
Y11_28201	SSF110997	Sporulation related repeat
Y11_28211	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Y11_28221	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_28241	SSF89562	RraA-like
Y11_28261	SSF81338	Aquaporin-like
Y11_28271	SSF53067	Actin-like ATPase domain
Y11_28281	SSF56655	Carbohydrate phosphatase
Y11_28301	SSF103473	MFS general substrate transporter
Y11_28321	SSF56399	ADP-ribosylation
Y11_28331	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Y11_28331	SSF63380	Riboflavin synthase domain-like
Y11_28361	SSF51351	Triosephosphate isomerase (TIM)
Y11_28381	SSF53850	Periplasmic binding protein-like II
Y11_28391	SSF53784	Phosphofructokinase
Y11_28401	SSF160240	Cation efflux protein cytoplasmic domain-like
Y11_28401	SSF161111	Cation efflux protein transmembrane domain-like
Y11_28421	SSF69279	Phage tail proteins
Y11_28531	SSF47413	lambda repressor-like DNA-binding domains
Y11_28591	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_28631	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_28651	SSF103642	Sec-C motif
Y11_28691	SSF47413	lambda repressor-like DNA-binding domains
Y11_28701	SSF56349	DNA breaking-rejoining enzymes
Y11_28721	SSF52172	CheY-like
Y11_28731	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_28731	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_28741	SSF46689	Homeodomain-like
Y11_28741	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
Y11_28741	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
Y11_28741	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
Y11_28751	SSF75217	alpha/beta knot
Y11_28761	SSF51161	Trimeric LpxA-like enzymes
Y11_28771	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_28771	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_28781	SSF54611	SecB-like
Y11_28791	SSF52833	Thioredoxin-like
Y11_28801	SSF52821	Rhodanese/Cell cycle control phosphatase
Y11_28811	SSF53649	Alkaline phosphatase-like
Y11_28811	SSF64158	2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain
Y11_28821	SSF51261	Duplicated hybrid motif
Y11_28831	SSF88713	Glycoside hydrolase/deacetylase
Y11_28871	SSF50129	GroES-like
Y11_28871	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_28881	SSF53383	PLP-dependent transferases
Y11_28891	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_28901	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_28911	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_28921	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_28931	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_28941	SSF52374	Nucleotidylyl transferase
Y11_28951	SSF46946	S13-like H2TH domain
Y11_28951	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Y11_28951	SSF81624	N-terminal domain of MutM-like DNA repair proteins
Y11_28961	SSF57829	Zn-binding ribosomal proteins
Y11_28971	SSF143800	L28p-like
Y11_28981	SSF102712	JAB1/MPN domain
Y11_28981	SSF47781	RuvA domain 2-like
Y11_28991	SSF102645	CoaB-like
Y11_28991	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
Y11_29001	SSF51283	dUTPase-like
Y11_29011	SSF46689	Homeodomain-like
Y11_29011	SSF48498	Tetracyclin repressor-like, C-terminal domain
Y11_29051	SSF53271	PRTase-like
Y11_29061	SSF54211	Ribosomal protein S5 domain 2-like
Y11_29061	SSF55666	Ribonuclease PH domain 2-like
Y11_29081	SSF56281	Metallo-hydrolase/oxidoreductase
Y11_29091	SSF141868	EAL domain-like
Y11_29091	SSF55073	Nucleotide cyclase
Y11_29091	SSF55785	PYP-like sensor domain (PAS domain)
Y11_29101	SSF52096	ClpP/crotonase
Y11_29141	SSF47781	RuvA domain 2-like
Y11_29141	SSF50249	Nucleic acid-binding proteins
Y11_29141	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
Y11_29151	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29161	SSF63562	RPB6/omega subunit-like
Y11_29171	SSF109604	HD-domain/PDEase-like
Y11_29171	SSF55021	ACT-like
Y11_29171	SSF81271	TGS-like
Y11_29171	SSF81301	Nucleotidyltransferase
Y11_29181	SSF75217	alpha/beta knot
Y11_29191	SSF50249	Nucleic acid-binding proteins
Y11_29191	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29251	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_29261	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_29261	SSF55785	PYP-like sensor domain (PAS domain)
Y11_29271	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_29281	SSF47413	lambda repressor-like DNA-binding domains
Y11_29291	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Y11_29291	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_29301	SSF69500	DTD-like
Y11_29321	SSF56784	HAD-like
Y11_29331	SSF50447	Translation proteins
Y11_29331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29331	SSF54980	EF-G C-terminal domain-like
Y11_29341	SSF54368	Glutamine synthetase, N-terminal domain
Y11_29341	SSF55931	Glutamine synthetase/guanido kinase
Y11_29361	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_29361	SSF55785	PYP-like sensor domain (PAS domain)
Y11_29361	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_29371	SSF46689	Homeodomain-like
Y11_29371	SSF52172	CheY-like
Y11_29371	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29381	SSF102114	Radical SAM enzymes
Y11_29401	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29411	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Y11_29411	SSF53098	Ribonuclease H-like
Y11_29411	SSF56672	DNA/RNA polymerases
Y11_29411	SSF88723	PIN domain-like
Y11_29421	SSF52833	Thioredoxin-like
Y11_29431	SSF56112	Protein kinase-like (PK-like)
Y11_29451	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_29461	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29471	SSF53098	Ribonuclease H-like
Y11_29481	SSF48295	TrpR-like
Y11_29491	SSF46785	"Winged helix" DNA-binding domain
Y11_29491	SSF48008	GntR ligand-binding domain-like
Y11_29511	SSF103473	MFS general substrate transporter
Y11_29521	SSF47413	lambda repressor-like DNA-binding domains
Y11_29521	SSF53822	Periplasmic binding protein-like I
Y11_29531	SSF53613	Ribokinase-like
Y11_29541	SSF53822	Periplasmic binding protein-like I
Y11_29561	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29571	SSF102546	RbsD-like
Y11_29591	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29601	SSF53300	vWA-like
Y11_29621	SSF55681	Class II aaRS and biotin synthetases
Y11_29631	SSF46785	"Winged helix" DNA-binding domain
Y11_29631	SSF54909	Dimeric alpha+beta barrel
Y11_29641	SSF52218	Flavoproteins
Y11_29661	SSF51905	FAD/NAD(P)-binding domain
Y11_29671	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_29691	SSF81336	F1F0 ATP synthase subunit A
Y11_29701	SSF81333	F1F0 ATP synthase subunit C
Y11_29711	SSF81573	F1F0 ATP synthase subunit B, membrane domain
Y11_29721	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
Y11_29731	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Y11_29731	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Y11_29731	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29741	SSF52943	ATP synthase (F1-ATPase), gamma subunit
Y11_29751	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
Y11_29751	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
Y11_29751	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29761	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
Y11_29761	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
Y11_29771	SSF51161	Trimeric LpxA-like enzymes
Y11_29771	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_29781	SSF53697	SIS domain
Y11_29781	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
Y11_29791	SSF53850	Periplasmic binding protein-like II
Y11_29801	SSF161098	MetI-like
Y11_29811	SSF161098	MetI-like
Y11_29821	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29831	SSF109755	PhoU-like
Y11_29861	SSF53850	Periplasmic binding protein-like II
Y11_29871	SSF161098	MetI-like
Y11_29881	SSF161098	MetI-like
Y11_29891	SSF56784	HAD-like
Y11_29911	SSF143744	GlcG-like
Y11_29921	SSF52172	CheY-like
Y11_29931	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_29931	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_29941	SSF52218	Flavoproteins
Y11_29951	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_29961	SSF161098	MetI-like
Y11_29971	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_29971	SSF55021	ACT-like
Y11_29981	SSF53850	Periplasmic binding protein-like II
Y11_30001	SSF116878	TrmE connector domain
Y11_30001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_30071	SSF48295	TrpR-like
Y11_30071	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_30081	SSF55979	DNA clamp
Y11_30091	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_30101	SSF54211	Ribosomal protein S5 domain 2-like
Y11_30101	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_30101	SSF56719	Type II DNA topoisomerase
Y11_30111	SSF56784	HAD-like
Y11_30121	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_30131	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_30141	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_30151	SSF82171	DPP6 N-terminal domain-like
Y11_30171	SSF49764	HSP20-like chaperones
Y11_30181	SSF49764	HSP20-like chaperones
Y11_30211	SSF116726	TrkA C-terminal domain-like
Y11_30221	SSF53383	PLP-dependent transferases
Y11_30231	SSF51445	(Trans)glycosidases
Y11_30241	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_30241	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
Y11_30251	SSF103473	MFS general substrate transporter
Y11_30261	SSF46785	"Winged helix" DNA-binding domain
Y11_30271	SSF49695	gamma-Crystallin-like
Y11_30271	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_30281	SSF49695	gamma-Crystallin-like
Y11_30301	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_30311	SSF48150	DNA-glycosylase
Y11_30321	SSF55681	Class II aaRS and biotin synthetases
Y11_30331	SSF109604	HD-domain/PDEase-like
Y11_30351	SSF52794	PTS system IIB component-like
Y11_30351	SSF55804	Phoshotransferase/anion transport protein
Y11_30361	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_30361	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_30371	SSF158668	MtlR-like
Y11_30391	SSF46785	"Winged helix" DNA-binding domain
Y11_30391	SSF53383	PLP-dependent transferases
Y11_30411	SSF89447	AbrB/MazE/MraZ-like
Y11_30421	SSF88723	PIN domain-like
Y11_30431	SSF50800	PK beta-barrel domain-like
Y11_30441	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_30461	SSF46609	Fe,Mn superoxide dismutase (SOD), N-terminal domain
Y11_30461	SSF54719	Fe,Mn superoxide dismutase (SOD), C-terminal domain
Y11_30481	SSF54862	4Fe-4S ferredoxins
Y11_30491	SSF81342	Transmembrane di-heme cytochromes
Y11_30501	SSF144020	FdhE-like
Y11_30511	SSF53383	PLP-dependent transferases
Y11_30521	SSF46785	"Winged helix" DNA-binding domain
Y11_30521	SSF50447	Translation proteins
Y11_30521	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Y11_30521	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_30531	SSF103473	MFS general substrate transporter
Y11_30551	SSF46689	Homeodomain-like
Y11_30551	SSF52317	Class I glutamine amidotransferase-like
Y11_30561	SSF52499	Isochorismatase-like hydrolases
Y11_30571	SSF49354	PapD-like
Y11_30571	SSF49584	Periplasmic chaperone C-domain
Y11_30581	SSF53067	Actin-like ATPase domain
Y11_30591	SSF51658	Xylose isomerase-like
Y11_30601	SSF51658	Xylose isomerase-like
Y11_30611	SSF53822	Periplasmic binding protein-like I
Y11_30621	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_30651	SSF46689	Homeodomain-like
Y11_30651	SSF53822	Periplasmic binding protein-like I
Y11_30661	SSF56349	DNA breaking-rejoining enzymes
Y11_30671	SSF52467	DHS-like NAD/FAD-binding domain
Y11_30711	SSF53098	Ribonuclease H-like
Y11_30721	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_30741	SSF48557	L-aspartase-like
Y11_30751	SSF111326	Urocanase
Y11_30771	SSF141729	FimD N-terminal domain-like
Y11_30801	SSF51182	RmlC-like cupins
Y11_30811	SSF51445	(Trans)glycosidases
Y11_30821	SSF49265	Fibronectin type III
Y11_30821	SSF49785	Galactose-binding domain-like
Y11_30821	SSF51445	(Trans)glycosidases
Y11_30831	SSF56935	Porins
Y11_30841	SSF56935	Porins
Y11_30861	SSF52794	PTS system IIB component-like
Y11_30881	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
Y11_30891	SSF53067	Actin-like ATPase domain
Y11_30901	SSF47413	lambda repressor-like DNA-binding domains
Y11_30901	SSF53822	Periplasmic binding protein-like I
Y11_30911	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_30951	SSF143737	YeeU-like
Y11_30971	SSF53474	alpha/beta-Hydrolases
Y11_30981	SSF51126	Pectin lyase-like
Y11_31011	SSF51126	Pectin lyase-like
Y11_31031	SSF103473	MFS general substrate transporter
Y11_31041	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_31051	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_31051	SSF52172	CheY-like
Y11_31061	SSF53649	Alkaline phosphatase-like
Y11_31071	SSF82784	OsmC-like
Y11_31101	SSF53850	Periplasmic binding protein-like II
Y11_31111	SSF161098	MetI-like
Y11_31121	SSF161098	MetI-like
Y11_31131	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_31141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_31191	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_31201	SSF141371	PilZ domain-like
Y11_31201	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_31221	SSF48208	Six-hairpin glycosidases
Y11_31231	SSF48452	TPR-like
Y11_31241	SSF48452	TPR-like
Y11_31251	SSF141868	EAL domain-like
Y11_31261	SSF56935	Porins
Y11_31281	SSF49785	Galactose-binding domain-like
Y11_31291	SSF118215	Proton glutamate symport protein
Y11_31301	SSF63411	LuxS/MPP-like metallohydrolase
Y11_31311	SSF53613	Ribokinase-like
Y11_31321	SSF55331	Tautomerase/MIF
Y11_31341	SSF141868	EAL domain-like
Y11_31361	SSF54197	HIT-like
Y11_31381	SSF103515	Autotransporter
Y11_31381	SSF51126	Pectin lyase-like
Y11_31391	SSF51905	FAD/NAD(P)-binding domain
Y11_31391	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Y11_31401	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_31411	SSF55486	Metalloproteases ("zincins"), catalytic domain
Y11_31421	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_31431	SSF51120	beta-Roll
Y11_31431	SSF55486	Metalloproteases ("zincins"), catalytic domain
Y11_31441	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_31441	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Y11_31451	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_31481	SSF160996	HI0933 insert domain-like
Y11_31481	SSF51905	FAD/NAD(P)-binding domain
Y11_31491	SSF118215	Proton glutamate symport protein
Y11_31521	SSF51604	Enolase C-terminal domain-like
Y11_31521	SSF54826	Enolase N-terminal domain-like
Y11_31531	SSF51703	Cobalamin (vitamin B12)-dependent enzymes
Y11_31551	SSF52242	Cobalamin (vitamin B12)-binding domain
Y11_31561	SSF54211	Ribosomal protein S5 domain 2-like
Y11_31571	SSF53790	Tetrapyrrole methylase
Y11_31591	SSF46785	"Winged helix" DNA-binding domain
Y11_31591	SSF53850	Periplasmic binding protein-like II
Y11_31601	SSF117457	FumA C-terminal domain-like
Y11_31611	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_31621	SSF56784	HAD-like
Y11_31641	SSF46785	"Winged helix" DNA-binding domain
Y11_31641	SSF53850	Periplasmic binding protein-like II
Y11_31651	SSF103473	MFS general substrate transporter
Y11_31661	SSF53720	ALDH-like
Y11_31671	SSF51182	RmlC-like cupins
Y11_31681	SSF46689	Homeodomain-like
Y11_31681	SSF53697	SIS domain
Y11_31691	SSF53613	Ribokinase-like
Y11_31701	SSF52467	DHS-like NAD/FAD-binding domain
Y11_31701	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_31711	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_31711	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_31721	SSF51658	Xylose isomerase-like
Y11_31731	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_31741	SSF51182	RmlC-like cupins
Y11_31751	SSF47413	lambda repressor-like DNA-binding domains
Y11_31751	SSF53822	Periplasmic binding protein-like I
Y11_31771	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_31791	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_31791	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_31801	SSF52467	DHS-like NAD/FAD-binding domain
Y11_31801	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_31811	SSF117856	AF0104/ALDC/Ptd012-like
Y11_31821	SSF46785	"Winged helix" DNA-binding domain
Y11_31821	SSF53850	Periplasmic binding protein-like II
Y11_31831	SSF55781	GAF domain-like
Y11_31831	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_31841	SSF51011	Glycosyl hydrolase domain
Y11_31841	SSF51445	(Trans)glycosidases
Y11_31841	SSF81296	E set domains
Y11_31851	SSF51011	Glycosyl hydrolase domain
Y11_31851	SSF51445	(Trans)glycosidases
Y11_31851	SSF81296	E set domains
Y11_31861	SSF51161	Trimeric LpxA-like enzymes
Y11_31861	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_31871	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_31881	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_31891	SSF51905	FAD/NAD(P)-binding domain
Y11_31891	SSF54373	FAD-linked reductases, C-terminal domain
Y11_31911	SSF100950	NagB/RpiA/CoA transferase-like
Y11_31911	SSF46785	"Winged helix" DNA-binding domain
Y11_31921	SSF144091	Rhomboid-like
Y11_31931	SSF52821	Rhodanese/Cell cycle control phosphatase
Y11_31951	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_31951	SSF48452	TPR-like
Y11_31951	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_31961	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_31971	SSF51445	(Trans)glycosidases
Y11_31991	SSF117916	Fe-S cluster assembly (FSCA) domain-like
Y11_31991	SSF89360	HesB-like domain
Y11_32001	SSF53271	PRTase-like
Y11_32021	SSF53474	alpha/beta-Hydrolases
Y11_32031	SSF159871	YdgH-like
Y11_32041	SSF46785	"Winged helix" DNA-binding domain
Y11_32051	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_32071	SSF50037	C-terminal domain of transcriptional repressors
Y11_32081	SSF158832	Tex N-terminal region-like
Y11_32081	SSF47781	RuvA domain 2-like
Y11_32081	SSF50249	Nucleic acid-binding proteins
Y11_32081	SSF53098	Ribonuclease H-like
Y11_32091	SSF103473	MFS general substrate transporter
Y11_32121	SSF48613	Heme oxygenase-like
Y11_32141	SSF46557	GreA transcript cleavage protein, N-terminal domain
Y11_32141	SSF54534	FKBP-like
Y11_32151	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_32151	SSF52172	CheY-like
Y11_32161	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_32161	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_32191	SSF53795	PEP carboxykinase-like
Y11_32191	SSF68923	PEP carboxykinase N-terminal domain
Y11_32201	SSF118352	HSP33 redox switch-like
Y11_32201	SSF64397	Hsp33 domain
Y11_32211	SSF55174	Alpha-L RNA-binding motif
Y11_32221	SSF56784	HAD-like
Y11_32261	SSF55811	Nudix
Y11_32271	SSF53955	Lysozyme-like
Y11_32271	SSF56601	beta-lactamase/transpeptidase-like
Y11_32281	SSF53067	Actin-like ATPase domain
Y11_32331	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_32341	SSF56796	Dehydroquinate synthase-like
Y11_32361	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_32371	SSF51366	Ribulose-phoshate binding barrel
Y11_32381	SSF56784	HAD-like
Y11_32391	SSF52374	Nucleotidylyl transferase
Y11_32401	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_32401	SSF53790	Tetrapyrrole methylase
Y11_32401	SSF75615	Siroheme synthase middle domains-like
Y11_32421	SSF50022	ISP domain
Y11_32431	SSF51905	FAD/NAD(P)-binding domain
Y11_32431	SSF55124	Nitrite/Sulfite reductase N-terminal domain-like
Y11_32431	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Y11_32451	SSF51338	Composite domain of metallo-dependent hydrolases
Y11_32451	SSF51556	Metallo-dependent hydrolases
Y11_32461	SSF103473	MFS general substrate transporter
Y11_32471	SSF47413	lambda repressor-like DNA-binding domains
Y11_32471	SSF53822	Periplasmic binding protein-like I
Y11_32481	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_32481	SSF56327	LDH C-terminal domain-like
Y11_32501	SSF50891	Cyclophilin-like
Y11_32511	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_32521	SSF52317	Class I glutamine amidotransferase-like
Y11_32531	SSF53383	PLP-dependent transferases
Y11_32541	SSF53383	PLP-dependent transferases
Y11_32561	SSF46785	"Winged helix" DNA-binding domain
Y11_32561	SSF51206	cAMP-binding domain-like
Y11_32571	SSF82784	OsmC-like
Y11_32581	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_32591	SSF118001	YehU-like
Y11_32601	SSF53474	alpha/beta-Hydrolases
Y11_32621	SSF54506	Diaminopimelate epimerase-like
Y11_32641	SSF53850	Periplasmic binding protein-like II
Y11_32651	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_32661	SSF161098	MetI-like
Y11_32671	SSF51197	Clavaminate synthase-like
Y11_32681	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_32691	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_32701	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_32711	SSF52218	Flavoproteins
Y11_32721	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_32741	SSF54534	FKBP-like
Y11_32761	SSF54534	FKBP-like
Y11_32781	SSF75169	DsrEFH-like
Y11_32791	SSF75169	DsrEFH-like
Y11_32801	SSF75169	DsrEFH-like
Y11_32811	SSF50249	Nucleic acid-binding proteins
Y11_32821	SSF47973	Ribosomal protein S7
Y11_32831	SSF50447	Translation proteins
Y11_32831	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_32831	SSF54211	Ribosomal protein S5 domain 2-like
Y11_32831	SSF54980	EF-G C-terminal domain-like
Y11_32841	SSF50447	Translation proteins
Y11_32841	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Y11_32841	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_32861	SSF47240	Ferritin-like
Y11_32871	SSF54999	Ribosomal protein S10
Y11_32881	SSF50447	Translation proteins
Y11_32891	SSF52166	Ribosomal protein L4
Y11_32901	SSF54189	Ribosomal proteins S24e, L23 and L15e
Y11_32911	SSF50104	Translation proteins SH3-like domain
Y11_32911	SSF50249	Nucleic acid-binding proteins
Y11_32921	SSF54570	Ribosomal protein S19
Y11_32931	SSF54843	Ribosomal protein L22
Y11_32941	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Y11_32941	SSF54821	Ribosomal protein S3 C-terminal domain
Y11_32951	SSF54686	Ribosomal protein L16p/L10e
Y11_32961	SSF46561	Ribosomal protein L29 (L29p)
Y11_32971	SSF50193	Ribosomal protein L14
Y11_32981	SSF50104	Translation proteins SH3-like domain
Y11_32991	SSF55282	RL5-like
Y11_33001	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Y11_33011	SSF56047	Ribosomal protein S8
Y11_33021	SSF56053	Ribosomal protein L6
Y11_33031	SSF53137	Translational machinery components
Y11_33041	SSF54211	Ribosomal protein S5 domain 2-like
Y11_33041	SSF54768	dsRNA-binding domain-like
Y11_33051	SSF55129	Ribosomal protein L30p/L7e
Y11_33061	SSF52080	Ribosomal proteins L15p and L18e
Y11_33071	SSF103491	Preprotein translocase SecY subunit
Y11_33081	SSF57840	Ribosomal protein L36
Y11_33091	SSF46946	S13-like H2TH domain
Y11_33101	SSF53137	Translational machinery components
Y11_33111	SSF55174	Alpha-L RNA-binding motif
Y11_33121	SSF47789	C-terminal domain of RNA polymerase alpha subunit
Y11_33121	SSF55257	RBP11-like subunits of RNA polymerase
Y11_33121	SSF56553	Insert subdomain of RNA polymerase alpha subunit
Y11_33131	SSF64263	Prokaryotic ribosomal protein L17
Y11_33151	SSF46955	Putative DNA-binding domain
Y11_33191	SSF81330	Gated mechanosensitive channel
Y11_33201	SSF116726	TrkA C-terminal domain-like
Y11_33201	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_33211	SSF48013	NusB-like
Y11_33211	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_33221	SSF50486	FMT C-terminal domain-like
Y11_33221	SSF53328	Formyltransferase
Y11_33231	SSF56420	Peptide deformylase
Y11_33241	SSF102405	MCP/YpsA-like
Y11_33261	SSF57783	Zinc beta-ribbon
Y11_33271	SSF55821	YrdC/RibB
Y11_33281	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_33281	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
Y11_33291	SSF51161	Trimeric LpxA-like enzymes
Y11_33331	SSF53822	Periplasmic binding protein-like I
Y11_33341	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_33371	SSF46785	"Winged helix" DNA-binding domain
Y11_33371	SSF53850	Periplasmic binding protein-like II
Y11_33391	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_33391	SSF54211	Ribosomal protein S5 domain 2-like
Y11_33411	SSF52467	DHS-like NAD/FAD-binding domain
Y11_33411	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_33421	SSF55021	ACT-like
Y11_33431	SSF56752	D-aminoacid aminotransferase-like PLP-dependent enzymes
Y11_33451	SSF143975	IlvD/EDD N-terminal domain-like
Y11_33451	SSF52016	LeuD/IlvD-like
Y11_33461	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_33461	SSF55021	ACT-like
Y11_33491	SSF46785	"Winged helix" DNA-binding domain
Y11_33491	SSF53850	Periplasmic binding protein-like II
Y11_33501	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_33501	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_33511	SSF54060	His-Me finger endonucleases
Y11_33511	SSF69369	Cloacin translocation domain
Y11_33521	SSF47345	Colicin E immunity proteins
Y11_33531	SSF47345	Colicin E immunity proteins
Y11_33551	SSF49354	PapD-like
Y11_33551	SSF49584	Periplasmic chaperone C-domain
Y11_33561	SSF49401	Bacterial adhesins
Y11_33571	SSF141729	FimD N-terminal domain-like
Y11_33581	SSF49354	PapD-like
Y11_33581	SSF49584	Periplasmic chaperone C-domain
Y11_33591	SSF49401	Bacterial adhesins
Y11_33601	SSF54534	FKBP-like
Y11_33611	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_33621	SSF49265	Fibronectin type III
Y11_33621	SSF51126	Pectin lyase-like
Y11_33631	SSF109604	HD-domain/PDEase-like
Y11_33631	SSF53067	Actin-like ATPase domain
Y11_33641	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_33651	SSF52833	Thioredoxin-like
Y11_33661	SSF50249	Nucleic acid-binding proteins
Y11_33661	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_33661	SSF68912	Rho N-terminal domain-like
Y11_33681	SSF160355	Bacterial polysaccharide co-polymerase-like
Y11_33691	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_33701	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_33701	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_33701	SSF52413	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Y11_33711	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_33721	SSF53448	Nucleotide-diphospho-sugar transferases
Y11_33731	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_33741	SSF53383	PLP-dependent transferases
Y11_33831	SSF48452	TPR-like
Y11_33851	SSF69618	HemD-like
Y11_33861	SSF53850	Periplasmic binding protein-like II
Y11_33861	SSF54782	Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
Y11_33891	SSF55387	Frataxin/Nqo15-like
Y11_33911	SSF54506	Diaminopimelate epimerase-like
Y11_33931	SSF47823	lambda integrase-like, N-terminal domain
Y11_33931	SSF56349	DNA breaking-rejoining enzymes
Y11_33941	SSF56784	HAD-like
Y11_33951	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_33961	SSF46689	Homeodomain-like
Y11_33981	SSF51621	Phosphoenolpyruvate/pyruvate domain
Y11_33991	SSF143865	CorA soluble domain-like
Y11_33991	SSF144083	Magnesium transport protein CorA, transmembrane region
Y11_34001	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_34011	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Y11_34021	SSF56931	Outer membrane phospholipase A (OMPLA)
Y11_34031	SSF47819	HRDC-like
Y11_34031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_34061	SSF53474	alpha/beta-Hydrolases
Y11_34071	SSF56784	HAD-like
Y11_34091	SSF51695	PLC-like phosphodiesterases
Y11_34101	SSF103473	MFS general substrate transporter
Y11_34121	SSF51905	FAD/NAD(P)-binding domain
Y11_34131	SSF51905	FAD/NAD(P)-binding domain
Y11_34141	SSF46548	alpha-helical ferredoxin
Y11_34171	SSF64307	SirA-like
Y11_34181	SSF55008	HMA, heavy metal-associated domain
Y11_34181	SSF56784	HAD-like
Y11_34181	SSF81653	Calcium ATPase, transduction domain A
Y11_34181	SSF81665	Calcium ATPase, transmembrane domain M
Y11_34231	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_34251	SSF47364	Domain of the SRP/SRP receptor G-proteins
Y11_34251	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_34261	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_34281	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Y11_34281	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Y11_34291	SSF51120	beta-Roll
Y11_34311	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_34321	SSF53822	Periplasmic binding protein-like I
Y11_34351	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_34361	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_34401	SSF49354	PapD-like
Y11_34441	SSF53850	Periplasmic binding protein-like II
Y11_34451	SSF53850	Periplasmic binding protein-like II
Y11_34461	SSF161098	MetI-like
Y11_34471	SSF161098	MetI-like
Y11_34481	SSF50331	MOP-like
Y11_34481	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_34491	SSF51695	PLC-like phosphodiesterases
Y11_34511	SSF46785	"Winged helix" DNA-binding domain
Y11_34511	SSF53850	Periplasmic binding protein-like II
Y11_34521	SSF51726	UROD/MetE-like
Y11_34531	SSF53474	alpha/beta-Hydrolases
Y11_34541	SSF53167	Purine and uridine phosphorylases
Y11_34591	SSF52799	(Phosphotyrosine protein) phosphatases II
Y11_34631	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_34641	SSF55718	SCP-like
Y11_34651	SSF56112	Protein kinase-like (PK-like)
Y11_34691	SSF51556	Metallo-dependent hydrolases
Y11_34701	SSF51569	Aldolase
Y11_34711	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Y11_34721	SSF143968	UbiD C-terminal domain-like
Y11_34721	SSF50475	FMN-binding split barrel
Y11_34731	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Y11_34731	SSF63380	Riboflavin synthase domain-like
Y11_34741	SSF53901	Thiolase-like
Y11_34751	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
Y11_34751	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_34751	SSF52096	ClpP/crotonase
Y11_34761	SSF55920	Creatinase/aminopeptidase
Y11_34771	SSF54211	Ribosomal protein S5 domain 2-like
Y11_34771	SSF54980	EF-G C-terminal domain-like
Y11_34791	SSF52218	Flavoproteins
Y11_34801	SSF48295	TrpR-like
Y11_34821	SSF56176	FAD-binding/transporter-associated domain-like
Y11_34821	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
Y11_34831	SSF46785	"Winged helix" DNA-binding domain
Y11_34831	SSF50037	C-terminal domain of transcriptional repressors
Y11_34831	SSF55681	Class II aaRS and biotin synthetases
Y11_34841	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_34861	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_34871	SSF50447	Translation proteins
Y11_34871	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
Y11_34871	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_34891	SSF50104	Translation proteins SH3-like domain
Y11_34891	SSF82679	N-utilization substance G protein NusG, N-terminal domain
Y11_34901	SSF46906	Ribosomal protein L11, C-terminal domain
Y11_34901	SSF54747	Ribosomal L11/L12e N-terminal domain
Y11_34911	SSF56808	Ribosomal protein L1
Y11_34921	SSF160369	Ribosomal protein L10-like
Y11_34931	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
Y11_34931	SSF54736	ClpS-like
Y11_34941	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Y11_34951	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
Y11_34971	SSF102114	Radical SAM enzymes
Y11_34981	SSF110399	ThiG-like
Y11_34991	SSF54285	MoaD/ThiS
Y11_35001	SSF69572	Activating enzymes of the ubiquitin-like proteins
Y11_35011	SSF51391	Thiamin phosphate synthase
Y11_35041	SSF55811	Nudix
Y11_35051	SSF51726	UROD/MetE-like
Y11_35081	SSF47729	IHF-like DNA-binding proteins
Y11_35101	SSF51246	Rudiment single hybrid motif
Y11_35101	SSF52440	PreATP-grasp domain
Y11_35101	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_35111	SSF52335	Methylglyoxal synthase-like
Y11_35111	SSF53927	Cytidine deaminase-like
Y11_35151	SSF56801	Acetyl-CoA synthetase-like
Y11_35161	SSF118215	Proton glutamate symport protein
Y11_35171	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_35171	SSF52172	CheY-like
Y11_35181	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Y11_35181	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_35181	SSF52172	CheY-like
Y11_35181	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_35241	SSF116927	EspA/CesA-like
Y11_35251	SSF48452	TPR-like
Y11_35291	SSF48452	TPR-like
Y11_35311	SSF46689	Homeodomain-like
Y11_35321	SSF140129	MxiH-like
Y11_35401	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_35431	SSF101801	Surface presentation of antigens (SPOA)
Y11_35491	SSF160544	EscU C-terminal domain-like
Y11_35521	SSF64307	SirA-like
Y11_35531	SSF74653	TolA/TonB C-terminal domain
Y11_35561	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Y11_35561	SSF88946	Sigma2 domain of RNA polymerase sigma factors
Y11_35581	SSF56935	Porins
Y11_35591	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_35591	SSF90123	ABC transporter transmembrane region
Y11_35601	SSF63411	LuxS/MPP-like metallohydrolase
Y11_35611	SSF143120	YefM-like
Y11_35621	SSF143011	RelE-like
Y11_35631	SSF50182	Sm-like ribonucleoproteins
Y11_35631	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Y11_35631	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Y11_35641	SSF56935	Porins
Y11_35661	SSF46785	"Winged helix" DNA-binding domain
Y11_35661	SSF53383	PLP-dependent transferases
Y11_35671	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_35681	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Y11_35691	SSF53807	"Helical backbone" metal receptor
Y11_35701	SSF144064	Heme iron utilization protein-like
Y11_35711	SSF56935	Porins
Y11_35731	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_35741	SSF144064	Heme iron utilization protein-like
Y11_35751	SSF102114	Radical SAM enzymes
Y11_35761	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_35781	SSF53067	Actin-like ATPase domain
Y11_35791	SSF51998	PFL-like glycyl radical enzymes
Y11_35801	SSF46689	Homeodomain-like
Y11_35801	SSF48498	Tetracyclin repressor-like, C-terminal domain
Y11_35811	SSF110738	Glycerate kinase I
Y11_35821	SSF110738	Glycerate kinase I
Y11_35831	SSF52833	Thioredoxin-like
Y11_35831	SSF74863	Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
Y11_35841	SSF54913	GlnB-like
Y11_35861	SSF48557	L-aspartase-like
Y11_35881	SSF50129	GroES-like
Y11_35891	SSF48592	GroEL equatorial domain-like
Y11_35891	SSF52029	GroEL apical domain-like
Y11_35891	SSF54849	GroEL-intermediate domain like
Y11_35911	SSF102114	Radical SAM enzymes
Y11_35921	SSF50104	Translation proteins SH3-like domain
Y11_35921	SSF50249	Nucleic acid-binding proteins
Y11_35941	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_35951	SSF50814	Lipocalins
Y11_35961	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Y11_35971	SSF81343	Fumarate reductase respiratory complex transmembrane subunits
Y11_35981	SSF46548	alpha-helical ferredoxin
Y11_35981	SSF54292	2Fe-2S ferredoxin-like
Y11_35991	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Y11_35991	SSF51905	FAD/NAD(P)-binding domain
Y11_35991	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Y11_36001	SSF55681	Class II aaRS and biotin synthetases
Y11_36011	SSF50182	Sm-like ribonucleoproteins
Y11_36011	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
Y11_36011	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
Y11_36031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_36041	SSF53098	Ribonuclease H-like
Y11_36051	SSF46548	alpha-helical ferredoxin
Y11_36061	SSF53613	Ribokinase-like
Y11_36061	SSF64153	YjeF N-terminal domain-like
Y11_36071	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_36081	SSF53187	Zn-dependent exopeptidases
Y11_36081	SSF54106	LysM domain
Y11_36091	SSF118116	DNA mismatch repair protein MutL
Y11_36091	SSF54211	Ribosomal protein S5 domain 2-like
Y11_36091	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_36101	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_36121	SSF50182	Sm-like ribonucleoproteins
Y11_36131	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_36131	SSF54980	EF-G C-terminal domain-like
Y11_36141	SSF117892	Band 7/SPFH domain
Y11_36151	SSF117892	Band 7/SPFH domain
Y11_36171	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_36181	SSF46785	"Winged helix" DNA-binding domain
Y11_36191	SSF50249	Nucleic acid-binding proteins
Y11_36201	SSF55315	L30e-like
Y11_36201	SSF75217	alpha/beta knot
Y11_36221	SSF47203	Acyl-CoA dehydrogenase C-terminal domain-like
Y11_36221	SSF56645	Acyl-CoA dehydrogenase NM domain-like
Y11_36241	SSF159871	YdgH-like
Y11_36251	SSF53474	alpha/beta-Hydrolases
Y11_36261	SSF159871	YdgH-like
Y11_36271	SSF54995	Ribosomal protein S6
Y11_36281	SSF50249	Nucleic acid-binding proteins
Y11_36291	SSF46911	Ribosomal protein S18
Y11_36301	SSF55653	Ribosomal protein L9 C-domain
Y11_36301	SSF55658	L9 N-domain-like
Y11_36331	SSF54534	FKBP-like
Y11_36351	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
Y11_36351	SSF56300	Metallo-dependent phosphatases
Y11_36361	SSF56655	Carbohydrate phosphatase
Y11_36391	SSF54631	CBS-domain pair
Y11_36391	SSF56176	FAD-binding/transporter-associated domain-like
Y11_36401	SSF55068	Peptide methionine sulfoxide reductase
Y11_36441	SSF110857	Gamma-glutamyl cyclotransferase-like
Y11_36451	SSF50324	Inorganic pyrophosphatase
Y11_36471	SSF47170	Aspartate receptor, ligand-binding domain
Y11_36471	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_36481	SSF56655	Carbohydrate phosphatase
Y11_36491	SSF51984	MurCD N-terminal domain
Y11_36491	SSF53244	MurD-like peptide ligases, peptide-binding domain
Y11_36491	SSF53623	MurD-like peptide ligases, catalytic domain
Y11_36501	SSF159871	YdgH-like
Y11_36511	SSF46785	"Winged helix" DNA-binding domain
Y11_36511	SSF55252	C-terminal domain of arginine repressor
Y11_36521	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_36521	SSF56327	LDH C-terminal domain-like
Y11_36531	SSF46955	Putative DNA-binding domain
Y11_36541	SSF48576	Terpenoid synthases
Y11_36551	SSF141091	L21p-like
Y11_36561	SSF110324	Ribosomal L27 protein-like
Y11_36571	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_36581	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_36581	SSF82051	Obg GTP-binding protein N-terminal domain
Y11_36591	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_36591	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_36601	SSF52172	CheY-like
Y11_36611	SSF56601	beta-lactamase/transpeptidase-like
Y11_36621	SSF46557	GreA transcript cleavage protein, N-terminal domain
Y11_36621	SSF54534	FKBP-like
Y11_36631	SSF75471	YhbY-like
Y11_36641	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_36651	SSF140990	FtsH protease domain-like
Y11_36651	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_36661	SSF51717	Dihydropteroate synthetase-like
Y11_36671	SSF53738	Phosphoglucomutase, first 3 domains
Y11_36671	SSF55957	Phosphoglucomutase, C-terminal domain
Y11_36691	SSF74942	YhbC-like, C-terminal domain
Y11_36691	SSF75420	YhbC-like, N-terminal domain
Y11_36701	SSF47794	Rad51 N-terminal domain-like
Y11_36701	SSF50249	Nucleic acid-binding proteins
Y11_36701	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Y11_36701	SSF69705	Transcription factor NusA, N-terminal domain
Y11_36711	SSF46955	Putative DNA-binding domain
Y11_36711	SSF50447	Translation proteins
Y11_36711	SSF52156	Initiation factor IF2/eIF5b, domain 3
Y11_36711	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_36721	SSF89919	Ribosome-binding factor A, RbfA
Y11_36731	SSF55120	Pseudouridine synthase
Y11_36731	SSF88697	PUA domain-like
Y11_36741	SSF47060	S15/NS1 RNA-binding domain
Y11_36751	SSF46915	Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
Y11_36751	SSF50249	Nucleic acid-binding proteins
Y11_36751	SSF54211	Ribosomal protein S5 domain 2-like
Y11_36751	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
Y11_36751	SSF55666	Ribonuclease PH domain 2-like
Y11_36761	SSF48452	TPR-like
Y11_36771	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_36791	SSF51679	Bacterial luciferase-like
Y11_36801	SSF56954	Outer membrane efflux proteins (OEP)
Y11_36841	SSF51391	Thiamin phosphate synthase
Y11_36851	SSF55718	SCP-like
Y11_36861	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_36871	SSF82771	GIY-YIG endonuclease
Y11_36891	SSF52172	CheY-like
Y11_36891	SSF53383	PLP-dependent transferases
Y11_36891	SSF55904	Ornithine decarboxylase C-terminal domain
Y11_36911	SSF48230	Chondroitin AC/alginate lyase
Y11_36921	SSF48230	Chondroitin AC/alginate lyase
Y11_36931	SSF53850	Periplasmic binding protein-like II
Y11_36941	SSF161098	MetI-like
Y11_36951	SSF161098	MetI-like
Y11_36961	SSF50331	MOP-like
Y11_36961	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_36971	SSF48230	Chondroitin AC/alginate lyase
Y11_36981	SSF50475	FMN-binding split barrel
Y11_37001	SSF143011	RelE-like
Y11_37011	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_37021	SSF56281	Metallo-hydrolase/oxidoreductase
Y11_37031	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37041	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37051	SSF51338	Composite domain of metallo-dependent hydrolases
Y11_37051	SSF51556	Metallo-dependent hydrolases
Y11_37061	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37071	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37111	SSF159709	PhnH-like
Y11_37131	SSF46785	"Winged helix" DNA-binding domain
Y11_37131	SSF64288	Chorismate lyase-like
Y11_37161	SSF102114	Radical SAM enzymes
Y11_37171	SSF51998	PFL-like glycyl radical enzymes
Y11_37181	SSF53850	Periplasmic binding protein-like II
Y11_37201	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37211	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37221	SSF161098	MetI-like
Y11_37231	SSF161098	MetI-like
Y11_37241	SSF53850	Periplasmic binding protein-like II
Y11_37261	SSF51197	Clavaminate synthase-like
Y11_37271	SSF53671	Aspartate/ornithine carbamoyltransferase
Y11_37281	SSF89946	Hypothetical protein VC0424
Y11_37311	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_37321	SSF46589	tRNA-binding arm
Y11_37321	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Y11_37321	SSF50677	ValRS/IleRS/LeuRS editing domain
Y11_37321	SSF52374	Nucleotidylyl transferase
Y11_37331	SSF102400	DNA polymerase III chi subunit
Y11_37341	SSF52949	Macro domain-like
Y11_37341	SSF53187	Zn-dependent exopeptidases
Y11_37391	SSF47598	Ribbon-helix-helix
Y11_37411	SSF47413	lambda repressor-like DNA-binding domains
Y11_37421	SSF48295	TrpR-like
Y11_37431	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37441	SSF53098	Ribonuclease H-like
Y11_37451	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37451	SSF56024	Phospholipase D/nuclease
Y11_37461	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_37471	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_37501	SSF48371	ARM repeat
Y11_37571	SSF54909	Dimeric alpha+beta barrel
Y11_37581	SSF51569	Aldolase
Y11_37591	SSF53822	Periplasmic binding protein-like I
Y11_37621	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37631	SSF100950	NagB/RpiA/CoA transferase-like
Y11_37641	SSF53067	Actin-like ATPase domain
Y11_37651	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_37681	SSF55909	Pentein
Y11_37691	SSF111369	HlyD-like secretion proteins
Y11_37701	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Y11_37701	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Y11_37701	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Y11_37711	SSF56796	Dehydroquinate synthase-like
Y11_37721	SSF82549	DAK1/DegV-like
Y11_37731	SSF101473	DhaL-like
Y11_37741	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Y11_37741	SSF52009	Phosphohistidine domain
Y11_37741	SSF53062	PTS system fructose IIA component-like
Y11_37741	SSF55594	HPr-like
Y11_37751	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_37761	SSF53067	Actin-like ATPase domain
Y11_37771	SSF51905	FAD/NAD(P)-binding domain
Y11_37781	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_37791	SSF103473	MFS general substrate transporter
Y11_37811	SSF51126	Pectin lyase-like
Y11_37821	SSF46689	Homeodomain-like
Y11_37821	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37821	SSF55785	PYP-like sensor domain (PAS domain)
Y11_37831	SSF47413	lambda repressor-like DNA-binding domains
Y11_37831	SSF53822	Periplasmic binding protein-like I
Y11_37841	SSF49899	Concanavalin A-like lectins/glucanases
Y11_37841	SSF75005	Arabinanase/levansucrase/invertase
Y11_37851	SSF55604	Glucose permease domain IIB
Y11_37861	SSF56935	Porins
Y11_37871	SSF53613	Ribokinase-like
Y11_37881	SSF53807	"Helical backbone" metal receptor
Y11_37891	SSF56935	Porins
Y11_37901	SSF55073	Nucleotide cyclase
Y11_37941	SSF46785	"Winged helix" DNA-binding domain
Y11_37941	SSF53850	Periplasmic binding protein-like II
Y11_37951	SSF51430	NAD(P)-linked oxidoreductase
Y11_37961	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_37971	SSF102220	DNA polymerase III psi subunit
Y11_37981	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_37991	SSF50447	Translation proteins
Y11_37991	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_37991	SSF54980	EF-G C-terminal domain-like
Y11_38021	SSF52151	FabD/lysophospholipase-like
Y11_38031	SSF51556	Metallo-dependent hydrolases
Y11_38051	SSF51569	Aldolase
Y11_38061	SSF47648	Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
Y11_38061	SSF52418	Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Y11_38061	SSF54680	Pyrimidine nucleoside phosphorylase C-terminal domain
Y11_38071	SSF143856	DeoB insert domain-like
Y11_38071	SSF53649	Alkaline phosphatase-like
Y11_38081	SSF53167	Purine and uridine phosphorylases
Y11_38101	SSF56784	HAD-like
Y11_38111	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_38111	SSF54211	Ribosomal protein S5 domain 2-like
Y11_38131	SSF47413	lambda repressor-like DNA-binding domains
Y11_38131	SSF52374	Nucleotidylyl transferase
Y11_38131	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_38141	SSF50129	GroES-like
Y11_38141	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_38151	SSF46785	"Winged helix" DNA-binding domain
Y11_38151	SSF53850	Periplasmic binding protein-like II
Y11_38161	SSF140931	Fic-like
Y11_38171	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_38181	SSF103088	OmpA-like
Y11_38191	SSF55073	Nucleotide cyclase
Y11_38211	SSF56784	HAD-like
Y11_38211	SSF81653	Calcium ATPase, transduction domain A
Y11_38211	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
Y11_38211	SSF81665	Calcium ATPase, transmembrane domain M
Y11_38221	SSF48435	Bacterial muramidases
Y11_38221	SSF53955	Lysozyme-like
Y11_38231	SSF48295	TrpR-like
Y11_38241	SSF52972	ITPase-like
Y11_38251	SSF53254	Phosphoglycerate mutase-like
Y11_38261	SSF46689	Homeodomain-like
Y11_38261	SSF55136	Probable bacterial effector-binding domain
Y11_38281	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_38281	SSF52172	CheY-like
Y11_38311	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_38311	SSF53633	Carbamate kinase-like
Y11_38311	SSF55021	ACT-like
Y11_38311	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_38321	SSF54211	Ribosomal protein S5 domain 2-like
Y11_38321	SSF55060	GHMP Kinase, C-terminal domain
Y11_38331	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes
Y11_38361	SSF51569	Aldolase
Y11_38371	SSF53218	Molybdenum cofactor biosynthesis proteins
Y11_38381	SSF103473	MFS general substrate transporter
Y11_38391	SSF49695	gamma-Crystallin-like
Y11_38391	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_38411	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Y11_38411	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
Y11_38411	SSF53067	Actin-like ATPase domain
Y11_38421	SSF46565	Chaperone J-domain
Y11_38421	SSF49493	HSP40/DnaJ peptide-binding domain
Y11_38421	SSF57938	DnaJ/Hsp40 cysteine-rich domain
Y11_38441	SSF46785	"Winged helix" DNA-binding domain
Y11_38441	SSF53850	Periplasmic binding protein-like II
Y11_38451	SSF46992	Ribosomal protein S20
Y11_38461	SSF52374	Nucleotidylyl transferase
Y11_38461	SSF82114	Riboflavin kinase-like
Y11_38471	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
Y11_38471	SSF50677	ValRS/IleRS/LeuRS editing domain
Y11_38471	SSF52374	Nucleotidylyl transferase
Y11_38491	SSF54534	FKBP-like
Y11_38511	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_38511	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_38521	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
Y11_38521	SSF52317	Class I glutamine amidotransferase-like
Y11_38531	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
Y11_38531	SSF52335	Methylglyoxal synthase-like
Y11_38531	SSF52440	PreATP-grasp domain
Y11_38531	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_38571	SSF53597	Dihydrofolate reductase-like
Y11_38581	SSF56300	Metallo-dependent phosphatases
Y11_38591	SSF110069	ApaG-like
Y11_38601	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_38611	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Y11_38621	SSF109998	Triger factor/SurA peptide-binding domain-like
Y11_38621	SSF54534	FKBP-like
Y11_38641	SSF46565	Chaperone J-domain
Y11_38651	SSF55120	Pseudouridine synthase
Y11_38661	SSF49373	Invasin/intimin cell-adhesion fragments
Y11_38671	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_38681	SSF53098	Ribonuclease H-like
Y11_38681	SSF56672	DNA/RNA polymerases
Y11_38701	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_38711	SSF161098	MetI-like
Y11_38721	SSF53850	Periplasmic binding protein-like II
Y11_38751	SSF46785	"Winged helix" DNA-binding domain
Y11_38751	SSF53850	Periplasmic binding protein-like II
Y11_38761	SSF102114	Radical SAM enzymes
Y11_38761	SSF54862	4Fe-4S ferredoxins
Y11_38771	SSF51998	PFL-like glycyl radical enzymes
Y11_38791	SSF103473	MFS general substrate transporter
Y11_38811	SSF53383	PLP-dependent transferases
Y11_38821	SSF53383	PLP-dependent transferases
Y11_38831	SSF52016	LeuD/IlvD-like
Y11_38841	SSF53732	Aconitase iron-sulfur domain
Y11_38851	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
Y11_38861	SSF110921	2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Y11_38861	SSF51569	Aldolase
Y11_38881	SSF46785	"Winged helix" DNA-binding domain
Y11_38881	SSF53850	Periplasmic binding protein-like II
Y11_38891	SSF56801	Acetyl-CoA synthetase-like
Y11_38911	SSF52467	DHS-like NAD/FAD-binding domain
Y11_38911	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_38921	SSF55021	ACT-like
Y11_38931	SSF47413	lambda repressor-like DNA-binding domains
Y11_38931	SSF53822	Periplasmic binding protein-like I
Y11_38961	SSF89447	AbrB/MazE/MraZ-like
Y11_38971	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_38971	SSF81799	Putative methyltransferase TM0872, insert domain
Y11_38991	SSF56519	Penicillin binding protein dimerisation domain
Y11_38991	SSF56601	beta-lactamase/transpeptidase-like
Y11_39001	SSF53244	MurD-like peptide ligases, peptide-binding domain
Y11_39001	SSF53623	MurD-like peptide ligases, catalytic domain
Y11_39001	SSF63418	MurE/MurF N-terminal domain
Y11_39011	SSF53244	MurD-like peptide ligases, peptide-binding domain
Y11_39011	SSF53623	MurD-like peptide ligases, catalytic domain
Y11_39011	SSF63418	MurE/MurF N-terminal domain
Y11_39031	SSF51984	MurCD N-terminal domain
Y11_39031	SSF53244	MurD-like peptide ligases, peptide-binding domain
Y11_39031	SSF53623	MurD-like peptide ligases, catalytic domain
Y11_39051	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_39061	SSF51984	MurCD N-terminal domain
Y11_39061	SSF53244	MurD-like peptide ligases, peptide-binding domain
Y11_39061	SSF53623	MurD-like peptide ligases, catalytic domain
Y11_39071	SSF52440	PreATP-grasp domain
Y11_39071	SSF56059	Glutathione synthetase ATP-binding domain-like
Y11_39091	SSF53067	Actin-like ATPase domain
Y11_39101	SSF52490	Tubulin nucleotide-binding domain-like
Y11_39101	SSF55307	Tubulin C-terminal domain-like
Y11_39111	SSF54211	Ribosomal protein S5 domain 2-like
Y11_39141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_39141	SSF81767	Pre-protein crosslinking domain of SecA
Y11_39141	SSF81886	Helical scaffold and wing domains of SecA
Y11_39151	SSF55811	Nudix
Y11_39161	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Y11_39171	SSF160950	YacF-like
Y11_39181	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_39191	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Y11_39211	SSF160246	EspE N-terminal domain-like
Y11_39211	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_39221	SSF54523	Pili subunits
Y11_39231	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
Y11_39231	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
Y11_39241	SSF55846	N-acetylmuramoyl-L-alanine amidase-like
Y11_39251	SSF90123	ABC transporter transmembrane region
Y11_39291	SSF46785	"Winged helix" DNA-binding domain
Y11_39291	SSF48008	GntR ligand-binding domain-like
Y11_39301	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
Y11_39301	SSF52922	TK C-terminal domain-like
Y11_39311	SSF47005	Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
Y11_39311	SSF51230	Single hybrid motif
Y11_39311	SSF52777	CoA-dependent acyltransferases
Y11_39321	SSF51905	FAD/NAD(P)-binding domain
Y11_39321	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
Y11_39331	SSF56399	ADP-ribosylation
Y11_39341	SSF46689	Homeodomain-like
Y11_39351	SSF56935	Porins
Y11_39361	SSF52016	LeuD/IlvD-like
Y11_39361	SSF53732	Aconitase iron-sulfur domain
Y11_39361	SSF74778	Aconitase B, N-terminal domain
Y11_39381	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_39411	SSF56276	S-adenosylmethionine decarboxylase
Y11_39421	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_39441	SSF49503	Cupredoxins
Y11_39451	SSF53271	PRTase-like
Y11_39461	SSF53056	beta-carbonic anhydrase, cab
Y11_39471	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_39501	SSF88713	Glycoside hydrolase/deacetylase
Y11_39511	SSF50692	ADC-like
Y11_39521	SSF52374	Nucleotidylyl transferase
Y11_39531	SSF51621	Phosphoenolpyruvate/pyruvate domain
Y11_39541	SSF55083	6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
Y11_39551	SSF81301	Nucleotidyltransferase
Y11_39551	SSF81891	Poly A polymerase C-terminal region-like
Y11_39561	SSF52374	Nucleotidylyl transferase
Y11_39571	SSF109635	DnaK suppressor protein DksA, alpha-hairpin domain
Y11_39571	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
Y11_39591	SSF55144	LigT-like
Y11_39601	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_39611	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_39611	SSF53955	Lysozyme-like
Y11_39611	SSF56601	beta-lactamase/transpeptidase-like
Y11_39621	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_39631	SSF53807	"Helical backbone" metal receptor
Y11_39641	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
Y11_39651	SSF103473	MFS general substrate transporter
Y11_39661	SSF53383	PLP-dependent transferases
Y11_39681	SSF81340	Clc chloride channel
Y11_39691	SSF89360	HesB-like domain
Y11_39721	SSF53807	"Helical backbone" metal receptor
Y11_39731	SSF53167	Purine and uridine phosphorylases
Y11_39741	SSF109604	HD-domain/PDEase-like
Y11_39751	SSF50156	PDZ domain-like
Y11_39751	SSF50494	Trypsin-like serine proteases
Y11_39761	SSF47226	Histidine-containing phosphotransfer domain, HPT domain
Y11_39771	SSF158472	HAMP domain-like
Y11_39771	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_39771	SSF52172	CheY-like
Y11_39771	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_39781	SSF50249	Nucleic acid-binding proteins
Y11_39781	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_39791	SSF109604	HD-domain/PDEase-like
Y11_39791	SSF55021	ACT-like
Y11_39791	SSF81271	TGS-like
Y11_39791	SSF81301	Nucleotidyltransferase
Y11_39801	SSF101386	all-alpha NTP pyrophosphatases
Y11_39811	SSF52317	Class I glutamine amidotransferase-like
Y11_39811	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_39821	SSF51604	Enolase C-terminal domain-like
Y11_39821	SSF54826	Enolase N-terminal domain-like
Y11_39831	SSF100950	NagB/RpiA/CoA transferase-like
Y11_39841	SSF102829	Cell division protein ZapA-like
Y11_39851	SSF101327	YgfB-like
Y11_39861	SSF53092	Creatinase/prolidase N-terminal domain
Y11_39861	SSF55920	Creatinase/aminopeptidase
Y11_39871	SSF51905	FAD/NAD(P)-binding domain
Y11_39881	SSF51905	FAD/NAD(P)-binding domain
Y11_39901	SSF101790	Aminomethyltransferase beta-barrel domain
Y11_39901	SSF103025	Folate-binding domain
Y11_39911	SSF51230	Single hybrid motif
Y11_39921	SSF53383	PLP-dependent transferases
Y11_39941	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_39951	SSF109604	HD-domain/PDEase-like
Y11_39991	SSF101790	Aminomethyltransferase beta-barrel domain
Y11_39991	SSF103025	Folate-binding domain
Y11_40001	SSF109910	YgfY-like
Y11_40021	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_40021	SSF52172	CheY-like
Y11_40031	SSF103190	Sensory domain-like
Y11_40041	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_40041	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_40061	SSF52218	Flavoproteins
Y11_40071	SSF47823	lambda integrase-like, N-terminal domain
Y11_40071	SSF56349	DNA breaking-rejoining enzymes
Y11_40081	SSF52833	Thioredoxin-like
Y11_40081	SSF54423	DsbC/DsbG N-terminal domain-like
Y11_40091	SSF64182	DHH phosphoesterases
Y11_40101	SSF75620	Release factor
Y11_40111	SSF50249	Nucleic acid-binding proteins
Y11_40111	SSF55681	Class II aaRS and biotin synthetases
Y11_40131	SSF143011	RelE-like
Y11_40141	SSF47413	lambda repressor-like DNA-binding domains
Y11_40161	SSF47413	lambda repressor-like DNA-binding domains
Y11_40191	SSF140931	Fic-like
Y11_40211	SSF54427	NTF2-like
Y11_40221	SSF55073	Nucleotide cyclase
Y11_40221	SSF55785	PYP-like sensor domain (PAS domain)
Y11_40251	SSF46565	Chaperone J-domain
Y11_40251	SSF49493	HSP40/DnaJ peptide-binding domain
Y11_40271	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_40281	SSF46785	"Winged helix" DNA-binding domain
Y11_40291	SSF53056	beta-carbonic anhydrase, cab
Y11_40301	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_40341	SSF160246	EspE N-terminal domain-like
Y11_40341	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_40371	SSF54523	Pili subunits
Y11_40381	SSF54523	Pili subunits
Y11_40391	SSF54523	Pili subunits
Y11_40411	SSF158544	GspK insert domain-like
Y11_40421	SSF53067	Actin-like ATPase domain
Y11_40471	SSF46894	C-terminal effector domain of the bipartite response regulators
Y11_40491	SSF47170	Aspartate receptor, ligand-binding domain
Y11_40501	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
Y11_40511	SSF52833	Thioredoxin-like
Y11_40521	SSF56281	Metallo-hydrolase/oxidoreductase
Y11_40531	SSF46785	"Winged helix" DNA-binding domain
Y11_40531	SSF53850	Periplasmic binding protein-like II
Y11_40541	SSF103473	MFS general substrate transporter
Y11_40551	SSF46785	"Winged helix" DNA-binding domain
Y11_40551	SSF53850	Periplasmic binding protein-like II
Y11_40561	SSF50621	Alanine racemase C-terminal domain-like
Y11_40561	SSF51419	PLP-binding barrel
Y11_40571	SSF47413	lambda repressor-like DNA-binding domains
Y11_40571	SSF53822	Periplasmic binding protein-like I
Y11_40581	SSF50692	ADC-like
Y11_40581	SSF53706	Formate dehydrogenase/DMSO reductase, domains 1-3
Y11_40601	SSF56801	Acetyl-CoA synthetase-like
Y11_40601	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
Y11_40611	SSF103473	MFS general substrate transporter
Y11_40621	SSF51430	NAD(P)-linked oxidoreductase
Y11_40641	SSF52980	Restriction endonuclease-like
Y11_40661	SSF55811	Nudix
Y11_40671	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
Y11_40671	SSF51621	Phosphoenolpyruvate/pyruvate domain
Y11_40671	SSF52009	Phosphohistidine domain
Y11_40671	SSF55781	GAF domain-like
Y11_40691	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
Y11_40701	SSF54523	Pili subunits
Y11_40741	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_40741	SSF52980	Restriction endonuclease-like
Y11_40751	SSF63411	LuxS/MPP-like metallohydrolase
Y11_40761	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_40761	SSF52980	Restriction endonuclease-like
Y11_40771	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_40791	SSF53633	Carbamate kinase-like
Y11_40791	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_40801	SSF53187	Zn-dependent exopeptidases
Y11_40811	SSF50685	Barwin-like endoglucanases
Y11_40821	SSF69572	Activating enzymes of the ubiquitin-like proteins
Y11_40831	SSF82649	SufE/NifU
Y11_40841	SSF53383	PLP-dependent transferases
Y11_40851	SSF50182	Sm-like ribonucleoproteins
Y11_40861	SSF46785	"Winged helix" DNA-binding domain
Y11_40861	SSF53850	Periplasmic binding protein-like II
Y11_40881	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_40911	SSF47807	5' to 3' exonuclease, C-terminal subdomain
Y11_40911	SSF88723	PIN domain-like
Y11_40921	SSF102405	MCP/YpsA-like
Y11_40931	SSF55620	Tetrahydrobiopterin biosynthesis enzymes-like
Y11_40951	SSF158452	YqcC-like
Y11_40961	SSF55120	Pseudouridine synthase
Y11_40971	SSF52218	Flavoproteins
Y11_40991	SSF51161	Trimeric LpxA-like enzymes
Y11_41001	SSF109604	HD-domain/PDEase-like
Y11_41001	SSF55021	ACT-like
Y11_41001	SSF81301	Nucleotidyltransferase
Y11_41001	SSF81593	Nucleotidyltransferase substrate binding subunit/domain
Y11_41001	SSF81891	Poly A polymerase C-terminal region-like
Y11_41011	SSF55920	Creatinase/aminopeptidase
Y11_41021	SSF52313	Ribosomal protein S2
Y11_41031	SSF46934	UBA-like
Y11_41031	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
Y11_41041	SSF53633	Carbamate kinase-like
Y11_41051	SSF55194	Ribosome recycling factor, RRF
Y11_41061	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_41061	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Y11_41061	SSF69055	1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
Y11_41071	SSF64005	Undecaprenyl diphosphate synthase
Y11_41091	SSF50156	PDZ domain-like
Y11_41111	SSF111384	OmpH-like
Y11_41121	SSF51161	Trimeric LpxA-like enzymes
Y11_41131	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
Y11_41141	SSF51161	Trimeric LpxA-like enzymes
Y11_41151	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
Y11_41161	SSF53098	Ribonuclease H-like
Y11_41171	SSF89550	PHP domain-like
Y11_41181	SSF52096	ClpP/crotonase
Y11_41191	SSF53383	PLP-dependent transferases
Y11_41191	SSF55904	Ornithine decarboxylase C-terminal domain
Y11_41201	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Y11_41211	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_41211	SSF56037	PheT/TilS domain
Y11_41211	SSF82829	MesJ substrate recognition domain-like
Y11_41221	SSF46626	Cytochrome c
Y11_41231	SSF101744	Rof/RNase P subunit-like
Y11_41251	SSF52980	Restriction endonuclease-like
Y11_41261	SSF75620	Release factor
Y11_41281	SSF52954	Class II aaRS ABD-related
Y11_41281	SSF55681	Class II aaRS and biotin synthetases
Y11_41281	SSF55826	YbaK/ProRS associated domain
Y11_41301	SSF118196	YaeB-like
Y11_41321	SSF53850	Periplasmic binding protein-like II
Y11_41331	SSF161098	MetI-like
Y11_41341	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_41341	SSF55021	ACT-like
Y11_41351	SSF56784	HAD-like
Y11_41371	SSF53901	Thiolase-like
Y11_41381	SSF51430	NAD(P)-linked oxidoreductase
Y11_41391	SSF46785	"Winged helix" DNA-binding domain
Y11_41391	SSF53850	Periplasmic binding protein-like II
Y11_41411	SSF103473	MFS general substrate transporter
Y11_41431	SSF56219	DNase I-like
Y11_41461	SSF53955	Lysozyme-like
Y11_41461	SSF54106	LysM domain
Y11_41471	SSF56281	Metallo-hydrolase/oxidoreductase
Y11_41481	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_41491	SSF53098	Ribonuclease H-like
Y11_41501	SSF53098	Ribonuclease H-like
Y11_41511	SSF53850	Periplasmic binding protein-like II
Y11_41521	SSF161098	MetI-like
Y11_41531	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_41531	SSF54631	CBS-domain pair
Y11_41541	SSF47240	Ferritin-like
Y11_41551	SSF48168	R1 subunit of ribonucleotide reductase, N-terminal domain
Y11_41551	SSF51998	PFL-like glycyl radical enzymes
Y11_41561	SSF52218	Flavoproteins
Y11_41571	SSF52833	Thioredoxin-like
Y11_41591	SSF69118	AhpD-like
Y11_41601	SSF46785	"Winged helix" DNA-binding domain
Y11_41601	SSF53383	PLP-dependent transferases
Y11_41631	SSF53474	alpha/beta-Hydrolases
Y11_41641	SSF46689	Homeodomain-like
Y11_41651	SSF103473	MFS general substrate transporter
Y11_41661	SSF159894	YgaC/TfoX-N like
Y11_41691	SSF50249	Nucleic acid-binding proteins
Y11_41701	SSF46689	Homeodomain-like
Y11_41721	SSF52821	Rhodanese/Cell cycle control phosphatase
Y11_41751	SSF53850	Periplasmic binding protein-like II
Y11_41761	SSF161098	MetI-like
Y11_41771	SSF161098	MetI-like
Y11_41781	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_41791	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_41821	SSF54111	Urease, gamma-subunit
Y11_41831	SSF51278	Urease, beta-subunit
Y11_41841	SSF51338	Composite domain of metallo-dependent hydrolases
Y11_41841	SSF51556	Metallo-dependent hydrolases
Y11_41851	SSF69287	Urease metallochaperone UreE, N-terminal domain
Y11_41871	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_41911	SSF47752	Protein HNS-dependent expression A; HdeA
Y11_41941	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_41941	SSF81324	Voltage-gated potassium channels
Y11_41971	SSF51430	NAD(P)-linked oxidoreductase
Y11_42001	SSF50952	Soluble quinoprotein glucose dehydrogenase
Y11_42011	SSF52794	PTS system IIB component-like
Y11_42031	SSF51445	(Trans)glycosidases
Y11_42041	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
Y11_42051	SSF46689	Homeodomain-like
Y11_42051	SSF51182	RmlC-like cupins
Y11_42061	SSF88713	Glycoside hydrolase/deacetylase
Y11_42071	SSF52091	SpoIIaa-like
Y11_42091	SSF56349	DNA breaking-rejoining enzymes
Y11_42101	SSF74982	Small protein B (SmpB)
Y11_42111	SSF55961	Bet v1-like
Y11_42121	SSF54285	MoaD/ThiS
Y11_42141	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_42151	SSF111331	NAD kinase/diacylglycerol kinase-like
Y11_42171	SSF51064	Head domain of nucleotide exchange factor GrpE
Y11_42171	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
Y11_42181	SSF52141	Uracil-DNA glycosylase-like
Y11_42191	SSF51998	PFL-like glycyl radical enzymes
Y11_42201	SSF53474	alpha/beta-Hydrolases
Y11_42221	SSF48403	Ankyrin repeat
Y11_42261	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_42271	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
Y11_42281	SSF46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
Y11_42281	SSF51905	FAD/NAD(P)-binding domain
Y11_42281	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
Y11_42291	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
Y11_42301	SSF89069	N-terminal, cytoplasmic domain of anti-sigmaE factor RseA
Y11_42341	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_42341	SSF54980	EF-G C-terminal domain-like
Y11_42351	SSF51306	LexA/Signal peptidase
Y11_42361	SSF54768	dsRNA-binding domain-like
Y11_42361	SSF69065	RNase III domain-like
Y11_42371	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_42371	SSF54814	Prokaryotic type KH domain (KH-domain type II)
Y11_42381	SSF50249	Nucleic acid-binding proteins
Y11_42381	SSF57863	ArfGap/RecO-like zinc finger
Y11_42391	SSF63892	Pyridoxine 5'-phosphate synthase
Y11_42401	SSF56214	4'-phosphopantetheinyl transferase
Y11_42421	SSF46689	Homeodomain-like
Y11_42421	SSF53697	SIS domain
Y11_42431	SSF53697	SIS domain
Y11_42441	SSF56784	HAD-like
Y11_42461	SSF53927	Cytidine deaminase-like
Y11_42471	SSF53850	Periplasmic binding protein-like II
Y11_42471	SSF53955	Lysozyme-like
Y11_42491	SSF109736	FGAM synthase PurL, linker domain
Y11_42491	SSF52317	Class I glutamine amidotransferase-like
Y11_42491	SSF55326	PurM N-terminal domain-like
Y11_42491	SSF56042	PurM C-terminal domain-like
Y11_42491	SSF82697	PurS-like
Y11_42511	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_42511	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_42531	SSF46689	Homeodomain-like
Y11_42531	SSF52172	CheY-like
Y11_42531	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_42541	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_42541	SSF56317	Carbon-nitrogen hydrolase
Y11_42551	SSF54913	GlnB-like
Y11_42581	SSF51556	Metallo-dependent hydrolases
Y11_42591	SSF51419	PLP-binding barrel
Y11_42601	SSF63520	PTS-regulatory domain, PRD
Y11_42611	SSF46785	"Winged helix" DNA-binding domain
Y11_42611	SSF53850	Periplasmic binding protein-like II
Y11_42621	SSF46458	Globin-like
Y11_42621	SSF52343	Ferredoxin reductase-like, C-terminal NADP-linked domain
Y11_42621	SSF63380	Riboflavin synthase domain-like
Y11_42631	SSF53383	PLP-dependent transferases
Y11_42641	SSF103473	MFS general substrate transporter
Y11_42651	SSF63520	PTS-regulatory domain, PRD
Y11_42681	SSF56655	Carbohydrate phosphatase
Y11_42691	SSF75217	alpha/beta knot
Y11_42701	SSF46785	"Winged helix" DNA-binding domain
Y11_42711	SSF53383	PLP-dependent transferases
Y11_42721	SSF82649	SufE/NifU
Y11_42731	SSF89360	HesB-like domain
Y11_42741	SSF46565	Chaperone J-domain
Y11_42741	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain
Y11_42751	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
Y11_42751	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
Y11_42751	SSF53067	Actin-like ATPase domain
Y11_42761	SSF54292	2Fe-2S ferredoxin-like
Y11_42771	SSF140319	IscX-like
Y11_42781	SSF53187	Zn-dependent exopeptidases
Y11_42801	SSF103515	Autotransporter
Y11_42801	SSF51126	Pectin lyase-like
Y11_42841	SSF48239	Terpenoid cyclases/Protein prenyltransferases
Y11_42851	SSF53955	Lysozyme-like
Y11_42851	SSF56601	beta-lactamase/transpeptidase-like
Y11_42861	SSF49695	gamma-Crystallin-like
Y11_42871	SSF54919	Nucleoside diphosphate kinase, NDK
Y11_42881	SSF102114	Radical SAM enzymes
Y11_42891	SSF48452	TPR-like
Y11_42901	SSF47413	lambda repressor-like DNA-binding domains
Y11_42911	SSF51604	Enolase C-terminal domain-like
Y11_42911	SSF56014	Nitrite and sulphite reductase 4Fe-4S domain-like
Y11_42931	SSF52954	Class II aaRS ABD-related
Y11_42931	SSF55681	Class II aaRS and biotin synthetases
Y11_42941	SSF48452	TPR-like
Y11_42951	SSF50998	Quinoprotein alcohol dehydrogenase-like
Y11_42971	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_43001	SSF161187	YfgJ-like
Y11_43021	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
Y11_43021	SSF54631	CBS-domain pair
Y11_43041	SSF52317	Class I glutamine amidotransferase-like
Y11_43041	SSF52402	Adenine nucleotide alpha hydrolases-like
Y11_43041	SSF54810	GMP synthetase C-terminal dimerisation domain
Y11_43071	SSF51905	FAD/NAD(P)-binding domain
Y11_43071	SSF54373	FAD-linked reductases, C-terminal domain
Y11_43081	SSF46626	Cytochrome c
Y11_43141	SSF53613	Ribokinase-like
Y11_43161	SSF89872	Inhibitor of vertebrate lysozyme, Ivy
Y11_43171	SSF53697	SIS domain
Y11_43171	SSF54631	CBS-domain pair
Y11_43181	SSF100950	NagB/RpiA/CoA transferase-like
Y11_43181	SSF46785	"Winged helix" DNA-binding domain
Y11_43201	SSF51735	NAD(P)-binding Rossmann-fold domains
Y11_43211	SSF141530	PTSIIA/GutA-like
Y11_43241	SSF111331	NAD kinase/diacylglycerol kinase-like
Y11_43261	SSF160113	YegP-like
Y11_43271	SSF52172	CheY-like
Y11_43281	SSF158472	HAMP domain-like
Y11_43281	SSF47384	Homodimeric domain of signal transducing histidine kinase
Y11_43281	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
Y11_43291	SSF103473	MFS general substrate transporter
Y11_43311	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Y11_43311	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Y11_43311	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Y11_43321	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
Y11_43321	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains
Y11_43321	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
Y11_43331	SSF111369	HlyD-like secretion proteins
Y11_43341	SSF53067	Actin-like ATPase domain
Y11_43351	SSF141868	EAL domain-like
Y11_43361	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_43371	SSF161098	MetI-like
Y11_43381	SSF161098	MetI-like
Y11_43381	SSF82171	DPP6 N-terminal domain-like
Y11_43391	SSF140356	PPK N-terminal domain-like
Y11_43391	SSF143724	PHP14-like
Y11_43391	SSF56024	Phospholipase D/nuclease
Y11_43401	SSF109604	HD-domain/PDEase-like
Y11_43401	SSF53067	Actin-like ATPase domain
Y11_43421	SSF158791	MgtE N-terminal domain-like
Y11_43421	SSF161093	MgtE membrane domain-like
Y11_43421	SSF54631	CBS-domain pair
Y11_43431	SSF55073	Nucleotide cyclase
Y11_43431	SSF55785	PYP-like sensor domain (PAS domain)
Y11_43441	SSF55729	Acyl-CoA N-acyltransferases (Nat)
Y11_43451	SSF53328	Formyltransferase
Y11_43461	SSF55326	PurM N-terminal domain-like
Y11_43461	SSF56042	PurM C-terminal domain-like
Y11_43471	SSF53271	PRTase-like
Y11_p0001	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_p0011	SSF53098	Ribonuclease H-like
Y11_p0021	SSF69635	Type III secretory system chaperone-like
Y11_p0031	SSF56112	Protein kinase-like (PK-like)
Y11_p0091	SSF54001	Cysteine proteinases
Y11_p0101	SSF69635	Type III secretory system chaperone-like
Y11_p0131	SSF46689	Homeodomain-like
Y11_p0151	SSF53098	Ribonuclease H-like
Y11_p0171	SSF64449	YopH tyrosine phosphatase N-terminal domain
Y11_p0201	SSF53098	Ribonuclease H-like
Y11_p0211	SSF53098	Ribonuclease H-like
Y11_p0221	SSF101967	Adhesin YadA, collagen-binding domain
Y11_p0221	SSF54523	Pili subunits
Y11_p0231	SSF103481	Multidrug resistance efflux transporter EmrE
Y11_p0261	SSF46689	Homeodomain-like
Y11_p0261	SSF53041	Resolvase-like
Y11_p0271	SSF52833	Thioredoxin-like
Y11_p0291	SSF46785	"Winged helix" DNA-binding domain
Y11_p0301	SSF52218	Flavoproteins
Y11_p0341	SSF53098	Ribonuclease H-like
Y11_p0361	SSF46689	Homeodomain-like
Y11_p0411	SSF46955	Putative DNA-binding domain
Y11_p0411	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_p0421	SSF109709	KorB DNA-binding domain-like
Y11_p0421	SSF110849	ParB/Sulfiredoxin
Y11_p0451	SSF47598	Ribbon-helix-helix
Y11_p0471	SSF47233	Bacterial GAP domain
Y11_p0471	SSF69635	Type III secretory system chaperone-like
Y11_p0481	SSF69635	Type III secretory system chaperone-like
Y11_p0491	SSF46689	Homeodomain-like
Y11_p0521	SSF53098	Ribonuclease H-like
Y11_p0531	SSF69635	Type III secretory system chaperone-like
Y11_p0541	SSF52799	(Phosphotyrosine protein) phosphatases II
Y11_p0541	SSF64449	YopH tyrosine phosphatase N-terminal domain
Y11_p0551	SSF64449	YopH tyrosine phosphatase N-terminal domain
Y11_p0561	SSF160527	V-type ATPase subunit E-like
Y11_p0601	SSF140591	Type III secretion system domain
Y11_p0621	SSF140129	MxiH-like
Y11_p0671	SSF69635	Type III secretory system chaperone-like
Y11_p0691	SSF46689	Homeodomain-like
Y11_p0691	SSF51215	Regulatory protein AraC
Y11_p0711	SSF160544	EscU C-terminal domain-like
Y11_p0751	SSF101801	Surface presentation of antigens (SPOA)
Y11_p0781	SSF52540	P-loop containing nucleoside triphosphate hydrolases
Y11_p0791	SSF140591	Type III secretion system domain
Y11_p0801	SSF140591	Type III secretion system domain
Y11_p0811	SSF69635	Type III secretory system chaperone-like
Y11_p0831	SSF48452	TPR-like
Y11_p0871	SSF103388	Virulence-associated V antigen
Y11_p0931	SSF52058	L domain-like
Y11_p0991	SSF53098	Ribonuclease H-like
Y11_p1011	SSF46689	Homeodomain-like
Y11_p1051	SSF53098	Ribonuclease H-like
Y11_p1071	SSF56024	Phospholipase D/nuclease